BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009007
(546 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 832 bits (2150), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 431/549 (78%), Positives = 483/549 (87%), Gaps = 7/549 (1%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
M GQR+ YGKR HSQ+D+ D+GPNKRR GDDR+QF+I EDTVYRY+CP RKIGS+IGR
Sbjct: 1 MGGQRSGYGKRPHSQSDH-DNGPNKRRNHGDDREQFVIDLEDTVYRYVCPGRKIGSVIGR 59
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEIVKQLR++TK+KIRIGETVPG EERVVT+YS SDETNA E G +VSPAQDALFKVH
Sbjct: 60 GGEIVKQLRVETKAKIRIGETVPGCEERVVTIYSPSDETNAVEGGGNYVSPAQDALFKVH 119
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV+AE+ GD+D DGG QVTAKLLVPSDQIGCVIGKGG IVQNIRSETGAQIRILKD+H
Sbjct: 120 DRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQNIRSETGAQIRILKDDH 179
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDELVQI+G+ASVVKKALCQIASRLHDNPSRSQHLL SA+ + + GSL+GP
Sbjct: 180 LPLCALSSDELVQITGDASVVKKALCQIASRLHDNPSRSQHLLTSAVPGVYPAGGSLIGP 239
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDW-SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A PIVGIAPL+G YGGYKGDT GDW RS+YSAPRD+ S+KEFS+RLVCP NIGGVI
Sbjct: 240 GAGAPIVGIAPLVGAYGGYKGDT-GDWPPRSMYSAPRDEASTKEFSVRLVCPTGNIGGVI 298
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GKGG IINQIRQESGA IKVDSS+TEGD+CLI +S+KEFFE+T S TIEA VRLQPRCSE
Sbjct: 299 GKGGMIINQIRQESGATIKVDSSTTEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSE 358
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
K+ERDSG+ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI+ KENLPKIASEDD
Sbjct: 359 KVERDSGIISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIISKENLPKIASEDD 418
Query: 420 EMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRD 479
EMVQISGDLD+AKDAL+ V+TRLRANLFDREGA+S+F+PVLPY+PVS +GSDGLNY+ RD
Sbjct: 419 EMVQISGDLDIAKDALVHVLTRLRANLFDREGALSSFLPVLPYLPVSADGSDGLNYDGRD 478
Query: 480 SKRHGRG--PPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRSGS-GLSSH 536
KRHGRG G GSSDLAAGD YGSYG SQL G+ SAYG+YGSYS GRS + GLSS
Sbjct: 479 GKRHGRGHSYSSGYGGSSDLAAGDIYGSYGGSQL-GSNSAYGAYGSYSLGRSSTAGLSSQ 537
Query: 537 APVSRRKSY 545
+ SRR+++
Sbjct: 538 SGASRRRNH 546
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 827 bits (2136), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/532 (78%), Positives = 471/532 (88%), Gaps = 4/532 (0%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRNSYGKR+HSQ+DY D G NKRR +GDDR++F+I +DTVYRYLCP RKIGSIIGR
Sbjct: 1 MAGQRNSYGKRAHSQSDY-DIGGNKRRNSGDDRERFVIDSQDTVYRYLCPARKIGSIIGR 59
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEI+KQLRIDTKSKIR+GETVPG EERVVT+YS SDETN +ED ++SPAQDALF+VH
Sbjct: 60 GGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSDETNEYEDSGNYISPAQDALFRVH 119
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
D+VIAE+L+ ++DS+G QVTAKLLVPSDQIGC+IGKGGQIVQNIRSETGA IRILKDEH
Sbjct: 120 DKVIAEDLQVEDDSEGSPQVTAKLLVPSDQIGCIIGKGGQIVQNIRSETGAVIRILKDEH 179
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDELVQISGEA+V+KKAL QIASRLHDNPSRSQHLL SA+ N +SS GSLVGP
Sbjct: 180 LPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPSRSQHLLVSAVPNVYSSVGSLVGP 239
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
+AA PIVGIAPLMGPYGG+KGDT GDWSRSLYSAPRD+L+SKEFSLR+VCP ANIG VIG
Sbjct: 240 SAAAPIVGIAPLMGPYGGFKGDT-GDWSRSLYSAPRDELASKEFSLRVVCPTANIGAVIG 298
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGG IINQIRQESGA IKVDSS EGDDCLIT+S+KE + D S TIEA VRLQPRCSEK
Sbjct: 299 KGGTIINQIRQESGATIKVDSSVAEGDDCLITISAKEIY-DHYSPTIEAAVRLQPRCSEK 357
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
+ERDSGLISFTTRLLVP+SRIGCL+GKGG+II EMR+LTKA IRI KENLPK+AS+DDE
Sbjct: 358 MERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDDDE 417
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDS 480
MVQI+GDLD+AKDALIQ+ RLRAN+FDREGA+S +PVLPY+PVS GS+GLNY+SRD
Sbjct: 418 MVQIAGDLDVAKDALIQISRRLRANVFDREGAMSAILPVLPYLPVSAEGSEGLNYDSRDG 477
Query: 481 KRHGR-GPPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRSGS 531
KRHGR GGY SSD A+GD YGSYGSSQ+ +G YG+YGSYSSGR+G+
Sbjct: 478 KRHGRGSSYAGGYSSSDYASGDGYGSYGSSQINASGGPYGAYGSYSSGRTGT 529
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 811 bits (2095), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/532 (78%), Positives = 467/532 (87%), Gaps = 6/532 (1%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
M GQR+ YGKR HSQ+D+ D+GPNKRR GDDR+QF+I EDTVYRY+CP RKIGS+IGR
Sbjct: 1 MGGQRSGYGKRPHSQSDH-DNGPNKRRNHGDDREQFVIDSEDTVYRYVCPGRKIGSVIGR 59
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEIVKQLR++TK+KIRIGETVPG EERVVT+Y SDETNA E G +VSPAQDALFKVH
Sbjct: 60 GGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGPSDETNAVEGGGNYVSPAQDALFKVH 119
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV+AE+ GD+D DGG QVTAKLLVPSDQIGCVIGKGG IVQNIR ETGAQIRILKD+H
Sbjct: 120 DRVVAEDFHGDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQNIRGETGAQIRILKDDH 179
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDELVQI+G+A+VVKKAL QIASRLHDNPSRSQHLL SA+S + + GSL+GP
Sbjct: 180 LPMCALSSDELVQITGDAAVVKKALYQIASRLHDNPSRSQHLLTSAVSGVYPAGGSLIGP 239
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDW-SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A PIVGIAPL+G YGGYKGDT GDW RS+YSAPRD+ SSKEFS+RLVCP NIGGVI
Sbjct: 240 GAGAPIVGIAPLVGSYGGYKGDT-GDWPPRSMYSAPRDEASSKEFSVRLVCPTGNIGGVI 298
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GKGG IINQIRQ+SGA IKVDSS+ EGD+CLI +S+KEFFE+T S TIEA VRLQPRCSE
Sbjct: 299 GKGGMIINQIRQDSGATIKVDSSTIEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSE 358
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
K+ERDSG+ISFTTRLLVPT+RIGCLIGKGGSIIT+MRRLTKANIRI+ KENLPKIA+EDD
Sbjct: 359 KVERDSGIISFTTRLLVPTTRIGCLIGKGGSIITDMRRLTKANIRIISKENLPKIANEDD 418
Query: 420 EMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRD 479
EMVQISGDLD+AKDAL+ V+TRLRANLFDREGA+S F+PVLPY+PVS +GSDGLNY+ RD
Sbjct: 419 EMVQISGDLDVAKDALVHVLTRLRANLFDREGALSAFLPVLPYLPVSADGSDGLNYDGRD 478
Query: 480 SKRHGRG--PPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRS 529
KRHGRG G GSSDLAAGD YGSYG SQL G+ SAYG+YGSYS GRS
Sbjct: 479 GKRHGRGHSYSSGYGGSSDLAAGDVYGSYGGSQL-GSNSAYGAYGSYSLGRS 529
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 789 bits (2038), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/548 (77%), Positives = 474/548 (86%), Gaps = 5/548 (0%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRNSYGKR+HSQ+DY D+G NKRR GDDRD F I PEDTVYRYLCP RKIGSIIGR
Sbjct: 1 MAGQRNSYGKRAHSQSDYGDNGGNKRRNPGDDRDPFTIEPEDTVYRYLCPGRKIGSIIGR 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEIVKQLR+DTKSKIRIGETVPG EERVVT+YS+SDETNAF+D D FVSPAQDALF+VH
Sbjct: 61 GGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSSSDETNAFDDSDTFVSPAQDALFRVH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV++EE+ G EDS+ QVT +LLVPSDQIGCVIGKGGQI+Q+IRSE+GAQ+RILKD+H
Sbjct: 121 DRVVSEEVHG-EDSEEASQVTVRLLVPSDQIGCVIGKGGQIIQSIRSESGAQVRILKDDH 179
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LPSCAL SDELVQISGE S+V+KAL QIASRLHDNPSRSQHLLASA+ +SS GSL+GP
Sbjct: 180 LPSCALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQHLLASAVPTGYSSGGSLMGP 239
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
T+ PI+G+APL+G YGGY+GD+ GDWSRSLYSAPRD+ SSKEFSLRLVCP+ NIGGVIG
Sbjct: 240 TSGAPIMGLAPLVGTYGGYRGDS-GDWSRSLYSAPRDEASSKEFSLRLVCPIGNIGGVIG 298
Query: 301 KGGAIINQIRQESGAAIKVDSSS-TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
KGG IINQIRQESGAAIKVDS+S E DDCLI +S+KEFFEDT S TIEA VRLQPRCSE
Sbjct: 299 KGGVIINQIRQESGAAIKVDSTSAAEADDCLIAISAKEFFEDTFSPTIEAAVRLQPRCSE 358
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
K+ERDSG++SFTTRLLVPTSRIGCLIGKGG+IITEMR+LTKANIRIL KENLPK+ASEDD
Sbjct: 359 KVERDSGIVSFTTRLLVPTSRIGCLIGKGGAIITEMRKLTKANIRILSKENLPKVASEDD 418
Query: 420 EMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRD 479
EMVQI+GDLD+AKDALIQV TRLRANLFDREGAVS FVPVLPY+P++ +GSDGL Y+ RD
Sbjct: 419 EMVQIAGDLDVAKDALIQVTTRLRANLFDREGAVSAFVPVLPYLPMAADGSDGLKYDGRD 478
Query: 480 SKRHGRGP--PYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRSGSGLSSHA 537
+KRHGRGP G GSSDLAA D+YG YGS G G S GSG+S
Sbjct: 479 NKRHGRGPSYSGGYGGSSDLAAADAYGGYGSQIGGSGSGYGAYGGYSSGRGGGSGVSGQN 538
Query: 538 PVSRRKSY 545
P SRRKSY
Sbjct: 539 PASRRKSY 546
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/500 (74%), Positives = 436/500 (87%), Gaps = 15/500 (3%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRNSYGKR+HSQ+DY+++G NKRR G+DRDQF+I EDTVYRYLCP++KIGS+IGR
Sbjct: 1 MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEIVKQLRIDTKSKIRIGETVPGS+ERV+T+YSAS+ETN+ E+ +VSPAQ+ALFK+H
Sbjct: 61 GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV+A++ ++ GGHQVTA+LLVPSDQIGC+IGKGGQIVQNIR+ETGAQ+RILKD+H
Sbjct: 121 DRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDELVQISGE +VKKAL QIASRLHDNPSRSQHLLASAI +SS GSL+ P
Sbjct: 181 LPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAP 240
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
T PI+G+APL+ PYGGYK APR+DLSSKEFSLRL+CP NIGGVIG
Sbjct: 241 THGAPIMGLAPLVSPYGGYK-------------APREDLSSKEFSLRLICPTENIGGVIG 287
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGGAIINQIRQE+ AAIKVDSS+TEGDDCLI +SSKEFFED+ S T+EA +RLQPRCSEK
Sbjct: 288 KGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEK 347
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
+ERDSG+ISFTTRLLVPTSRIGCLIGKGG+IITE+RRLTKANIRIL KENLPK+A EDDE
Sbjct: 348 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 407
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDS 480
MVQISGDLD+AK+AL+ ++TRLRANLFDREGA+S +PVLPY+P+S +GSD L+Y+ R+
Sbjct: 408 MVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREG 467
Query: 481 KRHGRGPPY-GGYGS-SDLA 498
KRHGRG Y GYG +DLA
Sbjct: 468 KRHGRGHSYSSGYGGFNDLA 487
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/500 (74%), Positives = 436/500 (87%), Gaps = 15/500 (3%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRNSYGKR+HSQ+DY+++G NKRR G+DRDQF+I EDTVYRYLCP++KIGS+IGR
Sbjct: 1 MAGQRNSYGKRNHSQSDYSENGGNKRRSHGEDRDQFVIDSEDTVYRYLCPVKKIGSVIGR 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEIVKQLRIDTKSKIRIGETVPGS+ERV+T+YSAS+ETN+ E+ +VSPAQ+ALFK+H
Sbjct: 61 GGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNETNSLEESSDYVSPAQEALFKIH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV+A++ ++ GGHQVTA+LLVPSDQIGC+IGKGGQIVQNIR+ETGAQ+RILKD+H
Sbjct: 121 DRVVADDYMDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQNIRTETGAQVRILKDDH 180
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDELVQISGE +VKKAL QIASRLHDNPSRSQHLLASAI +SS GSL+ P
Sbjct: 181 LPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLLASAIPGVYSSGGSLMAP 240
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
T PI+G+APL+ PYGGYK APR+DLSSKEFSLRL+CP NIGGVIG
Sbjct: 241 THGAPIMGLAPLVSPYGGYK-------------APREDLSSKEFSLRLICPTENIGGVIG 287
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGGAIINQIRQE+ AAIKVDSS+TEGDDCLI +SSKEFFED+ S T+EA +RLQPRCSEK
Sbjct: 288 KGGAIINQIRQETKAAIKVDSSATEGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEK 347
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
+ERDSG+ISFTTRLLVPTSRIGCLIGKGG+IITE+RRLTKANIRIL KENLPK+A EDDE
Sbjct: 348 VERDSGIISFTTRLLVPTSRIGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDE 407
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDS 480
MVQISGDLD+AK+AL+ ++TRLRANLFDREGA+S +PVLPY+P+S +GSD L+Y+ R+
Sbjct: 408 MVQISGDLDVAKEALVHIVTRLRANLFDREGALSAVLPVLPYLPLSADGSDSLSYDGREG 467
Query: 481 KRHGRGPPY-GGYGS-SDLA 498
KRHGRG Y GYG +DLA
Sbjct: 468 KRHGRGHSYSSGYGGFNDLA 487
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/554 (73%), Positives = 467/554 (84%), Gaps = 12/554 (2%)
Query: 1 MAGQR--NSYGKRSHSQTDYADHGPNKRRYTGDDRD--QFIIGPEDTVYRYLCPIRKIGS 56
M GQR ++YGKR SQ+DY G +R DRD QF+I EDTV+RYLCP RKIGS
Sbjct: 1 MGGQRERSNYGKRPRSQSDYDGGGNKRRNGGDHDRDREQFVINKEDTVFRYLCPGRKIGS 60
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIGRGGEIVKQLR++TK+KIRIGETVPG +ERVVTVYS+SDETN +DGDK VSPA+DAL
Sbjct: 61 IIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDDGDKLVSPAEDAL 120
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
FK+HDRV+AE+L D++ +GG QV AKLLVPSDQIGCV+GKGGQIVQN+RSETGAQIRIL
Sbjct: 121 FKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRIL 180
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
KD+H+P+CALRSDELVQISG+A+VVKKAL QIASRLH NPSR+QHLL SA+ + + S GS
Sbjct: 181 KDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPSVYPSGGS 240
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDW-SRSLYSAPRDDL-SSKEFSLRLVCPVAN 294
L+GPTA PIVG+APL+GPYGGYK DT GDW RS+YSAPRD++ SSKEFS+RLVCP N
Sbjct: 241 LMGPTAGPPIVGMAPLVGPYGGYKSDT-GDWPPRSMYSAPRDEISSSKEFSVRLVCPTGN 299
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+GGVIGKGG IINQIRQ+SGA IKVDSS+ +GDDCLIT+S+KEFFE+T S T+EA V LQ
Sbjct: 300 LGGVIGKGGGIINQIRQDSGATIKVDSSA-KGDDCLITISTKEFFEETFSPTVEAAVLLQ 358
Query: 355 PRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
PRCSEK ERDSG+ISFTTRLLV +SRIGCLIGKGGSIITEMRRLTK+NIRIL KENLPKI
Sbjct: 359 PRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKI 418
Query: 415 ASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLN 474
AS+DDEMVQISGDLD+AKDAL+QV+TRLRANLFDREGAV F+PVLPYIP +G D LN
Sbjct: 419 ASDDDEMVQISGDLDVAKDALVQVLTRLRANLFDREGAVPGFLPVLPYIPAPVDGPDVLN 478
Query: 475 YESRDSKRHGRG--PPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRSGS- 531
YESRD KRHGRG G GSSDL D+YGSY SSQL G GS YG Y SYS GR+ +
Sbjct: 479 YESRDGKRHGRGHSYSSGYGGSSDLGPVDTYGSYASSQLAG-GSGYGDYESYSLGRNSTV 537
Query: 532 GLSSHAPVSRRKSY 545
L S VSRR+++
Sbjct: 538 WLPSQNNVSRRRNH 551
>gi|356531744|ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 540
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/547 (71%), Positives = 457/547 (83%), Gaps = 11/547 (2%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRY-TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIG 59
M GQR+SYGKRSHS +D NKRR D+ +I +DTV+RYLCP+RKIGS+IG
Sbjct: 1 MTGQRSSYGKRSHSHSDSDAGSKNKRRNPAADESSSSLITADDTVFRYLCPVRKIGSVIG 60
Query: 60 RGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKV 119
RGG+IVKQLR DTK+KIRIG+ +PG +ERVVT++S+S+ETN F++ D VSPAQDALF+V
Sbjct: 61 RGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFDETDDLVSPAQDALFRV 120
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
H RVIAE+ R DED + H VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD+
Sbjct: 121 HQRVIAEDAREDEDEERNH-VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDD 179
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
LP CAL +DELVQISGEA+VVKKAL QIA+++ DNPSRSQHLLASA+ +++ G
Sbjct: 180 RLPPCALSTDELVQISGEAAVVKKALFQIAAQIRDNPSRSQHLLASAVPGGYATGG---- 235
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
P A PI+G+AP +G YGGYKGDT GDWSRSLY APRD+ S +EFS+R VCP NIGGVI
Sbjct: 236 PGAGAPIMGVAPFVGAYGGYKGDT-GDWSRSLYPAPRDEASMREFSVRFVCPTGNIGGVI 294
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GKGGAIINQIRQ+SGA IKVDSS+TEGDDCLI +S+KEFFED+ S TIEA VRLQPRCSE
Sbjct: 295 GKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISTKEFFEDSFSPTIEAAVRLQPRCSE 354
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
K+ERDSG++SFTTRLLVPTSRIGCLIGKGG+I+TEMRRLTKANIRIL K+NLPKIASEDD
Sbjct: 355 KVERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKDNLPKIASEDD 414
Query: 420 EMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRD 479
EMVQISGDLD+AKDAL+Q +TRLRANLFD+E AVS F+PVLPY+P S +GSDGLNY+SRD
Sbjct: 415 EMVQISGDLDVAKDALVQALTRLRANLFDKERAVSGFLPVLPYLPASVDGSDGLNYDSRD 474
Query: 480 SKRH-GRGPPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRSGSGLSSHAP 538
KRH G G GSSDLA+GD YGSYG+SQLG +G G+YG+YS GR+ + SS
Sbjct: 475 GKRHGRGGYSGGYGGSSDLASGDGYGSYGNSQLGSSG---GAYGNYSLGRTSAYGSSQNG 531
Query: 539 VSRRKSY 545
SRR+++
Sbjct: 532 SSRRRNH 538
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 747 bits (1928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 401/537 (74%), Positives = 457/537 (85%), Gaps = 11/537 (2%)
Query: 1 MAGQR--NSYGKRSHSQTDYADHGPNKRRYTGDDRD--QFIIGPEDTVYRYLCPIRKIGS 56
M GQR ++YGKR SQ+DY G +R DRD QF+I EDTV+RYLCP RKIGS
Sbjct: 1 MGGQRERSNYGKRPRSQSDYDGGGNKRRNGGDHDRDREQFVINKEDTVFRYLCPGRKIGS 60
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIGRGGEIVKQLR++TK+KIRIGETVPG +ERVVTVYS+SDETN +DGDK VSPA+DAL
Sbjct: 61 IIGRGGEIVKQLRVETKAKIRIGETVPGCDERVVTVYSSSDETNTVDDGDKLVSPAEDAL 120
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
FK+HDRV+AE+L D++ +GG QV AKLLVPSDQIGCV+GKGGQIVQN+RSETGAQIRIL
Sbjct: 121 FKIHDRVVAEDLHSDQEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRIL 180
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
KD+H+P+CALRSDELVQISG+A+VVKKAL QIASRLH NPSR+QHLL SA+ + + S GS
Sbjct: 181 KDDHVPACALRSDELVQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPSVYPSGGS 240
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDW-SRSLYSAPRDDL-SSKEFSLRLVCPVAN 294
L+GPTA PIVG+APL+GPYGGYK DT GDW RS+YSAPRD++ SSKEFS+RLVCP N
Sbjct: 241 LMGPTAGPPIVGMAPLVGPYGGYKSDT-GDWPPRSMYSAPRDEISSSKEFSVRLVCPTGN 299
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+GGVIGKGG IINQIRQ+SGA IKVDSS+ +GDDCLIT+S+KEFFE+T S T+EA V LQ
Sbjct: 300 LGGVIGKGGGIINQIRQDSGATIKVDSSA-KGDDCLITISTKEFFEETFSPTVEAAVLLQ 358
Query: 355 PRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
PRCSEK ERDSG+ISFTTRLLV +SRIGCLIGKGGSIITEMRRLTK+NIRIL KENLPKI
Sbjct: 359 PRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKI 418
Query: 415 ASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLN 474
AS+DDEMVQISGDLD+AKDAL+QV+TRLRANLFDREGAV F+PVLPYIP +G D LN
Sbjct: 419 ASDDDEMVQISGDLDVAKDALVQVLTRLRANLFDREGAVPGFLPVLPYIPAPVDGPDVLN 478
Query: 475 YESRDSKRHGRG--PPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRS 529
YESRD KRHGRG G GSSDL D+YGSY SSQL G GS YG Y SYS GR+
Sbjct: 479 YESRDGKRHGRGHSYSSGYGGSSDLGPVDTYGSYASSQLAG-GSGYGDYESYSLGRN 534
>gi|356568682|ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 543
Score = 730 bits (1885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/547 (72%), Positives = 456/547 (83%), Gaps = 8/547 (1%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRY-TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIG 59
M GQR SYGKRSHS +D NKRR DD +I +DTV+RYLCP+RKIGS+IG
Sbjct: 1 MTGQRISYGKRSHSHSDSDAGSKNKRRNPAADDSSSSLITADDTVFRYLCPVRKIGSVIG 60
Query: 60 RGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKV 119
RGG+IVKQLR DTK+KIRIG+ +PG +ERVVT++S+S+ETN F++ VSPAQDALF+V
Sbjct: 61 RGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNHFDETGDLVSPAQDALFRV 120
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
H RVIAE+ R DED + H VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD+
Sbjct: 121 HQRVIAEDAREDEDDERNH-VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDD 179
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
LP CAL +DELVQISGEA+VVKKAL QIA+++ DNPSRSQHLLASA+ +++ G
Sbjct: 180 RLPPCALSNDELVQISGEAAVVKKALFQIAAQIRDNPSRSQHLLASAVPGGYAAGGP--- 236
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A PI+G+AP +G YGGYKGDT GDWSRSLY APRD+ S +EFS+R VCP NIGGVI
Sbjct: 237 -GAGAPIMGVAPFVGAYGGYKGDT-GDWSRSLYPAPRDEASMREFSVRFVCPTGNIGGVI 294
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GKGGAIINQIRQ+SGA IKVDSS+TEGDDCLI +S KEFFED+ S TIEA VRLQPRCSE
Sbjct: 295 GKGGAIINQIRQDSGATIKVDSSATEGDDCLIIISMKEFFEDSFSPTIEAAVRLQPRCSE 354
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
K+ERDSG++SFTTRLLVPTSRIGCLIGKGG+I+TEMRRLTKANIRIL KENLPKIASEDD
Sbjct: 355 KVERDSGIVSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKENLPKIASEDD 414
Query: 420 EMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRD 479
EMVQISGDLD+AKDAL+Q +TRLRANLFD+E AVS F+PVLPY+P S +GSDGLNY+SRD
Sbjct: 415 EMVQISGDLDVAKDALVQALTRLRANLFDKERAVSGFLPVLPYLPASVDGSDGLNYDSRD 474
Query: 480 SKRHGR-GPPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRSGSGLSSHAP 538
KRHGR G G GSSDLA+GD YGSYG+SQLG G AYG+YG+YS GR+ + SS
Sbjct: 475 GKRHGRGGYSSGYGGSSDLASGDGYGSYGNSQLGSGGGAYGAYGNYSLGRTSAYGSSQNG 534
Query: 539 VSRRKSY 545
SRR+++
Sbjct: 535 SSRRRNH 541
>gi|297807547|ref|XP_002871657.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297317494|gb|EFH47916.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 714 bits (1843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/519 (67%), Positives = 432/519 (83%), Gaps = 7/519 (1%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
R+S+ KRS Q+DY D+G +KRRY GDDRD +I +DTV+RYLCP++KIGS+IGRGGE
Sbjct: 5 HRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGE 64
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV 123
IVKQLR+DT+SKIRIGE +PG +ERV+T+YS SDETNAF DG+K +SPAQDALF++HDRV
Sbjct: 65 IVKQLRMDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRV 124
Query: 124 IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
+A++ + ++ S+G QVTAKLLVPSDQIGC++G+GGQIVQNIRSETGAQIRI+KD ++P
Sbjct: 125 VADDAQSEDSSEGEQQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIIKDRNMPL 184
Query: 184 CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
CAL SDEL+QISGE +VKKAL QIASRLH+NPSRSQ+LL+SAIS + S GSL+
Sbjct: 185 CALNSDELIQISGEVLIVKKALHQIASRLHENPSRSQNLLSSAISGGYPS-GSLMSHAGG 243
Query: 244 TPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
+VGIAPLMG YG GDWSR LY PR+D + EF +RLV PV NI VIGKGG
Sbjct: 244 PRLVGIAPLMGSYG----RDGGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGG 299
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
A+INQ+RQE+ A IKVDSS TEG+DCLIT+S++E FED S TIEAV+RLQP+CSEK+ER
Sbjct: 300 ALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSEKVER 359
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
DSGL+SFTTRLLVP+SRIGC++GKGG+IITEMRR+TKANIRIL KENLPK+AS+DDEMVQ
Sbjct: 360 DSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQ 419
Query: 424 ISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
ISG+LD+AK+ALIQ+ +RLRAN+FDREGAVS +PVLPY+PV+ + D L+Y+SRDS+R
Sbjct: 420 ISGELDVAKEALIQITSRLRANVFDREGAVSALMPVLPYVPVAPDSGDRLDYDSRDSRRL 479
Query: 484 GRGPPY-GGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSY 521
RG PY GGYGSS L+A + Y SYG+ G + + YG Y
Sbjct: 480 ERGNPYPGGYGSSGLSA-EGYSSYGAPVGGSSSTPYGVY 517
>gi|30685269|ref|NP_851040.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30685276|ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|110737265|dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana]
gi|110738501|dbj|BAF01176.1| hypothetical protein [Arabidopsis thaliana]
gi|332004758|gb|AED92141.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004759|gb|AED92142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 548
Score = 697 bits (1800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/519 (65%), Positives = 426/519 (82%), Gaps = 9/519 (1%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
R+S+ KRS Q+DY D+G +KRRY GDDRD +I +DTV+RYLCP++KIGS+IGRGG+
Sbjct: 11 HRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGD 70
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV 123
IVKQLR DT+SKIRIGE +PG +ERV+T+YS SDETNAF DG+K +SPAQDALF++HDRV
Sbjct: 71 IVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRV 130
Query: 124 IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
+A++ R ++ +G QVTAKLLVPSDQIGC++G+GGQIVQNIRSETGAQIRI+KD ++P
Sbjct: 131 VADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPL 190
Query: 184 CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
CAL SDEL+QISGE +VKKAL QIASRLH+NPSRSQ+LL+S+ +GSL+
Sbjct: 191 CALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSS---GGYPAGSLMSHAGG 247
Query: 244 TPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
+VG+APLMG YG AGDWSR LY PR+D + EF +RLV PV NI VIGKGG
Sbjct: 248 PRLVGLAPLMGSYG----RDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGG 303
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
A+INQ+RQE+ A IKVDSS TEG+DCLIT+S++E FED S TIEAV+RLQP+CS+K+ER
Sbjct: 304 ALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVER 363
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
DSGL+SFTTRLLVP+SRIGC++GKGG+IITEMRR+TKANIRIL KENLPK+AS+DDEMVQ
Sbjct: 364 DSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQ 423
Query: 424 ISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
ISG+LD+AK+ALIQ+ +RLRAN+FDREGAVS +PVLPY+PV+ + D +Y+SRDS+R
Sbjct: 424 ISGELDVAKEALIQITSRLRANVFDREGAVSALMPVLPYVPVAPDAGDRFDYDSRDSRRL 483
Query: 484 GRGPPY-GGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSY 521
RG PY GGYGSS ++A + Y YG+ G + + YG Y
Sbjct: 484 ERGNPYPGGYGSSGVSA-EGYSPYGAPVGGSSSTPYGVY 521
>gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]
Length = 568
Score = 693 bits (1789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/564 (61%), Positives = 434/564 (76%), Gaps = 44/564 (7%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
R+S+ KRS Q+DY D+G +KRRY GDDRD +I +DTV+RYLCP++KIGS+IGRGG+
Sbjct: 11 HRDSHRKRSRPQSDYDDNGGSKRRYRGDDRDSLVIDRDDTVFRYLCPVKKIGSVIGRGGD 70
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV 123
IVKQLR DT+SKIRIGE +PG +ERV+T+YS SDETNAF DG+K +SPAQDALF++HDRV
Sbjct: 71 IVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGDGEKVLSPAQDALFRIHDRV 130
Query: 124 IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
+A++ R ++ +G QVTAKLLVPSDQIGC++G+GGQIVQNIRSETGAQIRI+KD ++P
Sbjct: 131 VADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPL 190
Query: 184 CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
CAL SDEL+QISGE +VKKAL QIASRLH+NPSRSQ+LL+S+ +GSL+
Sbjct: 191 CALNSDELIQISGEVLIVKKALLQIASRLHENPSRSQNLLSSS---GGYPAGSLMSHAGG 247
Query: 244 TPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
+VG+APLMG Y G AGDWSR LY PR+D + EF +RLV PV NI VIGKGG
Sbjct: 248 PRLVGLAPLMGSY----GRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGG 303
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
A+INQ+RQE+ A IKVDSS TEG+DCLIT+S++E FED S TIEAV+RLQP+CS+K+ER
Sbjct: 304 ALINQLRQETRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVER 363
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-- 421
DSGL+SFTTRLLVP+SRIGC++GKGG+IITEMRR+TKANIRIL KENLPK+AS+DDEM
Sbjct: 364 DSGLVSFTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENLPKVASDDDEMVQ 423
Query: 422 ---------------------------------VQISGDLDLAKDALIQVMTRLRANLFD 448
VQISG+LD+AK+ALIQ+ +RLRAN+FD
Sbjct: 424 VNFMVLLLKFSLQFLLSRLRYFTWSVNSNSNFDVQISGELDVAKEALIQITSRLRANVFD 483
Query: 449 REGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPY-GGYGSSDLAAGDSYGSYG 507
REGAVS +PVLPY+PV+ + D +Y+SRDS+R RG PY GGYGSS ++A + Y YG
Sbjct: 484 REGAVSALMPVLPYVPVAPDAGDRFDYDSRDSRRLERGNPYPGGYGSSGVSA-EGYSPYG 542
Query: 508 SSQLGGTGSAYGSYGSYSSGRSGS 531
+ G + + YG YG Y+SGRS S
Sbjct: 543 APVGGSSSTPYGVYGGYASGRSSS 566
>gi|357501947|ref|XP_003621262.1| KH domain-containing protein [Medicago truncatula]
gi|355496277|gb|AES77480.1| KH domain-containing protein [Medicago truncatula]
Length = 571
Score = 672 bits (1734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/573 (66%), Positives = 443/573 (77%), Gaps = 32/573 (5%)
Query: 1 MAGQRNSYG-KRSHSQTDYADH-GPNKRRYTGDD----RDQFIIGPEDTVYRYLCPIRKI 54
MAGQR SYG KRSHS D+ NKRR D RD F I +DTVYRYLCP+RKI
Sbjct: 1 MAGQRTSYGNKRSHSHNSVDDNRTNNKRRNPNTDETTPRDTFHITQDDTVYRYLCPVRKI 60
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQD 114
GSIIGRGGEIVKQLR+DTK+KIRIGETVPG +ERVVTVYS SDE+N FED +F+ PA D
Sbjct: 61 GSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYSVSDESNDFEDSGEFMCPAMD 120
Query: 115 ALFKVHDRVIAEELRGDEDSD-------GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
AL ++H +VIAE+LRG ED D GG VTAKLLV SDQIGCVIGKGGQIVQNIRS
Sbjct: 121 ALVRIHQKVIAEDLRGVEDEDVDMEKVDGGDLVTAKLLVASDQIGCVIGKGGQIVQNIRS 180
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAI 227
ETGAQIRILKD+ LP CAL SDELVQISGE +VVKKAL Q+A+RLHDNPSR+QHLL SA+
Sbjct: 181 ETGAQIRILKDDRLPLCALNSDELVQISGEIAVVKKALIQVAARLHDNPSRTQHLLTSAV 240
Query: 228 SNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLR 287
+++SGS+VG PI+G+AP+ G YGGYKGD D+ RS+Y RD+ S KEFS+R
Sbjct: 241 PGVYAASGSMVGSHGGAPIMGMAPIGGGYGGYKGDVV-DYPRSMYPGSRDEGSVKEFSVR 299
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATI 347
VCP ANIGGVIGKGG IINQIRQ+SGA IKVDSS+TEGDDCLI +S++E FED SATI
Sbjct: 300 FVCPTANIGGVIGKGGGIINQIRQDSGANIKVDSSATEGDDCLIAISARELFEDPFSATI 359
Query: 348 EAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
EA V LQPRCSEK+ERDSG++SFT+RLLV +SRIGCLIGKGGSIITEMRRLTKANIRIL
Sbjct: 360 EAAVLLQPRCSEKVERDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILS 419
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV-PVLPYIPVS 466
KE+LPKIA+EDDEMVQISG+LD+AKDAL+QV+TRLRANLFD+E +VS+ + PVL Y+P S
Sbjct: 420 KEDLPKIATEDDEMVQISGELDIAKDALLQVLTRLRANLFDKERSVSSLLPPVLAYLPAS 479
Query: 467 ENGSDGLNYE-----SRDSKRHGRGPPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSY 521
G D +YE + YG GSSD +GD YG+YGSSQL G G YG+Y
Sbjct: 480 PEGPDSFSYEGRDGRRHGRGGYSYSDGYG--GSSDFVSGDGYGNYGSSQL-GRGGPYGAY 536
Query: 522 GSYSSGR-SGSGLSSHAP--------VSRRKSY 545
GSY++ R S SGLS VSRR+++
Sbjct: 537 GSYAAERTSTSGLSDRLSDRLSGQHGVSRRRNH 569
>gi|147853553|emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
Length = 543
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/498 (68%), Positives = 404/498 (81%), Gaps = 15/498 (3%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRN YGKRSHSQ+DY +G +KRR GDD++Q IG EDTVYRYLCP+RKIGSIIGR
Sbjct: 1 MAGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGR 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GG+I KQLR +TKS IRIGET+PG EERVVT+YS+S+ETN F D + VSPAQDALF+VH
Sbjct: 61 GGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DR++A EL DE+ + QVT ++LVPSDQIGCVIGKGGQ++QNIRSET AQIRILKDEH
Sbjct: 121 DRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEH 180
Query: 181 LPSCALRSDELV------------QISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
LP CAL SDEL+ QI G+ASVV+KAL Q+ASRLH+NPSRSQHLL S+
Sbjct: 181 LPPCALSSDELLQAFGNVFWALTSQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSSP 240
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRL 288
N + S G+ + P P+VG+APLMG YGGYKGDT GDWS S YSA RD+ S+KEFSLRL
Sbjct: 241 NMYQSGGTFMTPNIDAPLVGVAPLMGSYGGYKGDT-GDWSHSYYSARRDESSAKEFSLRL 299
Query: 289 VCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIE 348
VCP NIGGVIGKGG II QIRQESGA+IKVDSSS EGDDC+I +S+KEFFED S TI+
Sbjct: 300 VCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFEDP-SPTID 358
Query: 349 AVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK 408
A +RLQPRCSEK ER+S TTRLLVP+SRIGCLIGKGG+II+EMR +T+ANIRIL K
Sbjct: 359 AALRLQPRCSEKAERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSK 418
Query: 409 ENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSEN 468
ENLPK+ASEDDEMVQI+G+L++A +AL+QV RL+ANLF+REGA++ P LPY+P+S+
Sbjct: 419 ENLPKVASEDDEMVQITGELNVASNALLQVTLRLKANLFEREGAIAAIPPTLPYLPMSDM 478
Query: 469 GSDGLNYESRDSKRHGRG 486
SDG Y SRDS+ RG
Sbjct: 479 -SDGSKYGSRDSQPRERG 495
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 633 bits (1633), Expect = e-179, Method: Compositional matrix adjust.
Identities = 329/548 (60%), Positives = 403/548 (73%), Gaps = 20/548 (3%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRN+YGKR S++DY+ +KRR D+++ IGPEDTV+RYLCP KIGSIIG
Sbjct: 1 MAGQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGV 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GG+I KQLR +T SKIRI ET+PG EERVVT+YS S+ETN ED +SPAQDALF+VH
Sbjct: 61 GGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRVH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV+AE+LR DED + Q+T ++LVPSDQIGCVIGKGGQ++QN+RSETGAQIR+L EH
Sbjct: 121 DRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEH 180
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDEL+QI+GE +VVKKAL Q+A+RLHDNPSRSQH L S+ S S +G V P
Sbjct: 181 LPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQLLSSPSIFRSGAG-FVNP 239
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
A T ++G+ LMGPY YK D S S KEF++RLVCP N+G VIG
Sbjct: 240 HAGTQVMGVTSLMGPYASYKSDGRSKSS-----------SVKEFAVRLVCPTENVGAVIG 288
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGG II Q+RQESGA+IKVDS++ EGDDC+I VS+KE FED S TI+A +RLQPR SEK
Sbjct: 289 KGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQ-SPTIDATMRLQPRSSEK 347
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
E++SG TTRLLVP+SR+GCLIGKGGSII EMR T+A+IR+L KENLPK+ASEDDE
Sbjct: 348 TEKESGDAILTTRLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDE 407
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRD- 479
MVQI+GD ++A +AL+QV+ RLRAN F+ EG+ F P L Y+P+S + DG Y +RD
Sbjct: 408 MVQITGDANVATNALLQVLMRLRANTFEMEGSFPAFSPGLSYVPMSASMPDGSRYGNRDN 467
Query: 480 -SKRHGRGPPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGR-SGSGLSSHA 537
S+RHG GG+ +DL+ DSYG G Y YG YSSGR S +G+SSH
Sbjct: 468 RSRRHGYSSYSGGHDYNDLSPSDSYGGSQVGGGGN----YAPYGVYSSGRPSSAGVSSHN 523
Query: 538 PVSRRKSY 545
P + KSY
Sbjct: 524 PSAYGKSY 531
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 613 bits (1580), Expect = e-173, Method: Compositional matrix adjust.
Identities = 322/534 (60%), Positives = 394/534 (73%), Gaps = 19/534 (3%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRN+YGKR S++DY+ +KRR D+++ IGPEDTV+RYLCP KIGSIIG
Sbjct: 1 MAGQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIGPEDTVFRYLCPTGKIGSIIGV 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GG+I KQLR +T SKIRI ET+PG EERVVT+YS S+ETN ED +SPAQDALF+VH
Sbjct: 61 GGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSEDTGDLISPAQDALFRVH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DRV+AE+LR DED + Q+T ++LVPSDQIGCVIGKGGQ++QN+RSETGAQIR+L EH
Sbjct: 121 DRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEH 180
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDEL+QI+GE +VVKKAL Q+A+RLHDNPSRSQH L S+ S S +G LV P
Sbjct: 181 LPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQLLSSPSIFRSGAG-LVNP 239
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
A T ++G+ LMGPY YK D RS S S KEF++RLVCP N+G VIG
Sbjct: 240 HAGTQVMGVTSLMGPYASYKSD-----GRSRSS------SVKEFAVRLVCPTENVGAVIG 288
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGG II Q+RQESGA+IKVDS++ EGDDC+I VS+KE FED S TI+A +RLQPR SEK
Sbjct: 289 KGGGIIKQLRQESGASIKVDSAAAEGDDCIIFVSAKEAFEDQ-SPTIDATMRLQPRSSEK 347
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
E++SG TTRLLVP+SR+GCLIGKGGSII EMR T+A+IR+L KENLPK+ASEDDE
Sbjct: 348 TEKESGDAILTTRLLVPSSRVGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDE 407
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDS 480
MVQI+GD ++A +AL+QV+ RLRAN F+ EG+ F P L Y+P+S + DG Y +RD+
Sbjct: 408 MVQITGDANVAANALLQVLMRLRANTFEMEGSFPAFSPGLSYVPMSASMPDGSRYGNRDN 467
Query: 481 --KRHGRGPPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRSGSG 532
+RH GG+ +DL+ DSYG G Y YG YSSGR S
Sbjct: 468 RSRRHSHSSYSGGHDYNDLSPSDSYGGSQVGGGGN----YAPYGVYSSGRPSSA 517
>gi|308081899|ref|NP_001183640.1| uncharacterized protein LOC100502234 [Zea mays]
gi|238013618|gb|ACR37844.1| unknown [Zea mays]
gi|414867002|tpg|DAA45559.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867004|tpg|DAA45561.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
Length = 541
Score = 612 bits (1577), Expect = e-172, Method: Compositional matrix adjust.
Identities = 330/540 (61%), Positives = 418/540 (77%), Gaps = 12/540 (2%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAG RNS+GKR Q+D+ ++G +KRR GDD + GP+DTVYRYLC RKIGSIIGR
Sbjct: 1 MAGHRNSHGKR---QSDFTENGGSKRRNPGDD--TYAPGPDDTVYRYLCASRKIGSIIGR 55
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEI KQLR +T++KIRIGE+VPG +ERVVT++S S +TN + + V PAQDALF+VH
Sbjct: 56 GGEIAKQLRTETQAKIRIGESVPGCDERVVTIFSTSRKTNTIDGAEDEVCPAQDALFRVH 115
Query: 121 DRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+R+ ++E G+EDS+ QVT +LLVPSDQIGC+IGKGGQI+Q IRSETGAQIR+L ++
Sbjct: 116 ERLASDEGLGNEDSEEISPQVTVRLLVPSDQIGCIIGKGGQIIQGIRSETGAQIRVLSND 175
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
H+P+CA+ DEL+QISG+ VV+KAL Q++SRLH+NPS+SQHLLAS+++ + S L G
Sbjct: 176 HIPACAISGDELLQISGDTVVVRKALHQVSSRLHNNPSKSQHLLASSLTQPYPGSTHLGG 235
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
+ A P+VGI P++ PYGGYKGD AGDW SLY RD+ S+KEFSLRL+C AN+GGVI
Sbjct: 236 SSTA-PVVGITPVIPPYGGYKGDVAGDWP-SLYQPRRDESSAKEFSLRLLCAAANVGGVI 293
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTE-GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
GKGG II QIRQESGA IKV SS+++ DDC+ITVS+KEFFED +S TI+A VRLQPRCS
Sbjct: 294 GKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQPRCS 353
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
EK + +S S+TTRLLV TSRIGCLIGKGGSIITE+RR ++AN+RIL KEN+PK+A+ED
Sbjct: 354 EKSDLESAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANVRILSKENVPKVAAED 413
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESR 478
DEMVQI+G LD+A++AL+Q+ TRL+AN F+REG++S F PV+PY P+ SD Y R
Sbjct: 414 DEMVQITGGLDVARNALVQIATRLKANFFEREGSLSAFPPVIPYHPLPAGVSDEPKYLGR 473
Query: 479 DSKRHGRGPPYGGYGSS-DLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRSGSGLSSHA 537
D+K G G+ +S D DSY SYG SQ G G YG+Y YS+ S SGLS H+
Sbjct: 474 DTKPVGHYLYSSGFRTSDDTIPSDSYASYGGSQAPGRG--YGAYSGYSARSSNSGLSGHS 531
>gi|296086352|emb|CBI31941.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 607 bits (1564), Expect = e-171, Method: Compositional matrix adjust.
Identities = 324/486 (66%), Positives = 382/486 (78%), Gaps = 32/486 (6%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRN YGKRSHSQ+DY +G +KRR GDD++Q IG EDTVYRYLCP+RKIGSIIGR
Sbjct: 67 MAGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGR 126
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GG+I KQLR +TKS IRIGET+PG EERVVT+YS+S+ETN F D + VSPAQDALF+VH
Sbjct: 127 GGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVH 186
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DR++A EL DE+ + QVT ++LVPSDQIGCVIGKGGQ++QNIRSET AQIRILKDEH
Sbjct: 187 DRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEH 246
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDEL+QI G+ASVV+KAL Q+ASRLH+NPSRSQHLL S+ N + S
Sbjct: 247 LPPCALSSDELLQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSSPNMYQS------- 299
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
GDWS S YSA RD+ S+KEFSLRLVCP NIGGVIG
Sbjct: 300 -----------------------GGDWSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIG 336
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGG II QIRQESGA+IKVDSSS EGDDC+I +S+KEFFED S TI+A +RLQPRCSEK
Sbjct: 337 KGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFEDP-SPTIDAALRLQPRCSEK 395
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
ER+S TTRLLVP+SRIGCLIGKGG+II+EMR +T+ANIRIL KENLPK+ASEDDE
Sbjct: 396 AERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDE 455
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDS 480
MVQI+G+L++A +AL+QV RL+ANLF+REGA++ P LPY+P+S+ SDG Y SRDS
Sbjct: 456 MVQITGELNVASNALLQVTLRLKANLFEREGAIAAIPPTLPYLPMSDM-SDGSKYGSRDS 514
Query: 481 KRHGRG 486
+ RG
Sbjct: 515 QPRERG 520
>gi|359473301|ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 517
Score = 605 bits (1560), Expect = e-170, Method: Compositional matrix adjust.
Identities = 324/486 (66%), Positives = 382/486 (78%), Gaps = 32/486 (6%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAGQRN YGKRSHSQ+DY +G +KRR GDD++Q IG EDTVYRYLCP+RKIGSIIGR
Sbjct: 1 MAGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVEDTVYRYLCPVRKIGSIIGR 60
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GG+I KQLR +TKS IRIGET+PG EERVVT+YS+S+ETN F D + VSPAQDALF+VH
Sbjct: 61 GGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDTGELVSPAQDALFRVH 120
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DR++A EL DE+ + QVT ++LVPSDQIGCVIGKGGQ++QNIRSET AQIRILKDEH
Sbjct: 121 DRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNIRSETRAQIRILKDEH 180
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
LP CAL SDEL+QI G+ASVV+KAL Q+ASRLH+NPSRSQHLL S+ N + S
Sbjct: 181 LPPCALSSDELLQIIGDASVVRKALHQLASRLHENPSRSQHLLLSSSPNMYQS------- 233
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
GDWS S YSA RD+ S+KEFSLRLVCP NIGGVIG
Sbjct: 234 -----------------------GGDWSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIG 270
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
KGG II QIRQESGA+IKVDSSS EGDDC+I +S+KEFFED S TI+A +RLQPRCSEK
Sbjct: 271 KGGGIIKQIRQESGASIKVDSSSAEGDDCIIFISAKEFFEDP-SPTIDAALRLQPRCSEK 329
Query: 361 IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
ER+S TTRLLVP+SRIGCLIGKGG+II+EMR +T+ANIRIL KENLPK+ASEDDE
Sbjct: 330 AERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASEDDE 389
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDS 480
MVQI+G+L++A +AL+QV RL+ANLF+REGA++ P LPY+P+S+ SDG Y SRDS
Sbjct: 390 MVQITGELNVASNALLQVTLRLKANLFEREGAIAAIPPTLPYLPMSDM-SDGSKYGSRDS 448
Query: 481 KRHGRG 486
+ RG
Sbjct: 449 QPRERG 454
>gi|125544080|gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
Length = 542
Score = 604 bits (1558), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/512 (62%), Positives = 406/512 (79%), Gaps = 11/512 (2%)
Query: 3 GQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G RNS+GKR +DYA++G KRR GDD + GP+DTVYRYLCP RKIGSIIGRGG
Sbjct: 5 GHRNSHGKR---HSDYAENGGGKRRNPGDD--TYAPGPDDTVYRYLCPSRKIGSIIGRGG 59
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
EI KQ+R DT++KIRIGE+V G +ERV+T++S+S ETN D + V PAQDALF+VH++
Sbjct: 60 EIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEK 119
Query: 123 VIAEELRGDEDSDGG-HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
+ ++ G+E+SD G QVT +LLVPSDQIGC+IGKGG I+Q IRS+TGA IR+L +E+L
Sbjct: 120 LSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENL 179
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT 241
P+CA+ DEL+QISG+++VV+KAL Q++SRLHDNPSRSQHLLAS+++ + GS +G +
Sbjct: 180 PACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPYPV-GSHLGSS 238
Query: 242 AATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGK 301
+ P+VGI PL+ YGGYKGD AGDW S+Y R++ S+KEFSLRL+C +N+GGVIGK
Sbjct: 239 STAPVVGITPLISSYGGYKGDVAGDWP-SIYQPRREESSAKEFSLRLLCAASNVGGVIGK 297
Query: 302 GGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
GG II QIRQESGA IKVDSS+TE DDC+ITVS+KEFFED +S TI A V LQPRCSEK
Sbjct: 298 GGGIIKQIRQESGAFIKVDSSNTE-DDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKT 356
Query: 362 ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM 421
+ +S + S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+A+ED+EM
Sbjct: 357 DPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEM 416
Query: 422 VQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSK 481
VQISGDLD+ + AL+Q+ TRL+AN F+REGA+S F PV+PY P+ S+G Y RD+K
Sbjct: 417 VQISGDLDVVRHALLQITTRLKANFFEREGALSGFPPVIPYHPLPVGVSEGPKYLGRDTK 476
Query: 482 RHGRGPPYG-GY-GSSDLAAGDSYGSYGSSQL 511
G PY GY GS D++ DSY SYGSSQ+
Sbjct: 477 PLGHDYPYSSGYRGSDDISPIDSYASYGSSQV 508
>gi|255584811|ref|XP_002533123.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223527086|gb|EEF29268.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 405
Score = 604 bits (1557), Expect = e-170, Method: Compositional matrix adjust.
Identities = 304/380 (80%), Positives = 337/380 (88%), Gaps = 3/380 (0%)
Query: 128 LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
+ D+DS+GGHQVTA+L+VPSDQIGC+IGKGGQIVQNIRSETGAQIRILKDEHLP CAL
Sbjct: 1 MHSDDDSEGGHQVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPPCALS 60
Query: 188 SDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIV 247
+DELVQISGE +VVKKAL QIA+RLH+NPSR+QHLL SA+ N + ++GSL+GPT A PIV
Sbjct: 61 TDELVQISGEVAVVKKALYQIATRLHENPSRTQHLLFSAVPNVYPATGSLIGPTGA-PIV 119
Query: 248 GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
GIAPLM YGGYKGD AGDWSRSLYSAPRD+LSSKEFSLR+VCP NIGGVIGKGG IIN
Sbjct: 120 GIAPLMSTYGGYKGD-AGDWSRSLYSAPRDELSSKEFSLRIVCPTGNIGGVIGKGGTIIN 178
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL 367
QIRQESGA IKVDSS+ EGDDCLITVS+KEFF+D S TIEA +RLQPRCSEKI RDSGL
Sbjct: 179 QIRQESGAVIKVDSSTAEGDDCLITVSAKEFFDDQYSPTIEAAIRLQPRCSEKIARDSGL 238
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
ISFTTRLLVPTSRIGCL+GKGG II EMR++TKANIRIL K+NLPK+ASEDDEMVQISGD
Sbjct: 239 ISFTTRLLVPTSRIGCLLGKGGVIINEMRKVTKANIRILGKDNLPKVASEDDEMVQISGD 298
Query: 428 LDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRG- 486
LD+AKDAL V RLRAN FDREGAVSTF+PVLPY+PVS +GSD LNY+SRDSKRHGRG
Sbjct: 299 LDVAKDALTHVSRRLRANAFDREGAVSTFLPVLPYLPVSADGSDSLNYDSRDSKRHGRGH 358
Query: 487 PPYGGYGSSDLAAGDSYGSY 506
GYGSSD A DSYG+Y
Sbjct: 359 SYSSGYGSSDYTAADSYGAY 378
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/170 (36%), Positives = 97/170 (57%), Gaps = 11/170 (6%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R +CP IG +IG+GG I+ Q+R ++ + I++ + ++ ++TV +A E
Sbjct: 158 RIVCPTGNIGGVIGKGGTIINQIRQESGAVIKVDSSTAEGDDCLITV-------SAKEFF 210
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D SP +A ++ R +E++ D G T +LLVP+ +IGC++GKGG I+ +
Sbjct: 211 DDQYSPTIEAAIRLQPRC-SEKIARDS---GLISFTTRLLVPTSRIGCLLGKGGVIINEM 266
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
R T A IRIL ++LP A DE+VQISG+ V K AL ++ RL N
Sbjct: 267 RKVTKANIRILGKDNLPKVASEDDEMVQISGDLDVAKDALTHVSRRLRAN 316
>gi|357112153|ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 538
Score = 603 bits (1556), Expect = e-170, Method: Compositional matrix adjust.
Identities = 322/513 (62%), Positives = 404/513 (78%), Gaps = 10/513 (1%)
Query: 3 GQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G RNS+GKR +DYA++G KRR GDD + P+DTVYRYLC RKIGSIIGRGG
Sbjct: 5 GHRNSHGKR---YSDYAENGGGKRRNPGDD--TYAPCPDDTVYRYLCASRKIGSIIGRGG 59
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
EI KQLR DT++KIRIGE+VPG +ERV+T++S+S ETN ED + V PAQDALF+VH++
Sbjct: 60 EIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTVEDTEDKVCPAQDALFRVHEK 119
Query: 123 VIAEELRGDEDSDGG-HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
+I ++ GDE+++ G QV +LLVPSDQIGC+IGKGG I+Q IRS+TG+ IR+L EHL
Sbjct: 120 LITDDGPGDEENEEGLAQVIVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSHIRVLSTEHL 179
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT 241
P+CA+ DEL+QISG+ VV+KAL Q++SRLHDNPSRSQHLLAS+++ + GS G +
Sbjct: 180 PACAISGDELLQISGDPLVVRKALLQVSSRLHDNPSRSQHLLASSLTQPYPV-GSRHGSS 238
Query: 242 AATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGK 301
+ TP+VGIAP++ PYGGYKGD GDW S+Y R++ S+KEFSLRL+C +++GGVIGK
Sbjct: 239 STTPVVGIAPMVNPYGGYKGDMVGDWP-SIYQPRREESSAKEFSLRLLCAASDVGGVIGK 297
Query: 302 GGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
GG II QIRQESGA IKVDSSS E DDC+ITVS+KEFFED +S TI+A VRLQPRCSEK
Sbjct: 298 GGGIIKQIRQESGAFIKVDSSSAE-DDCIITVSAKEFFEDPISPTIDATVRLQPRCSEKT 356
Query: 362 ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM 421
+ +SG S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+ASED+EM
Sbjct: 357 DPESGEPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEM 416
Query: 422 VQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSK 481
VQISGDLD+AK AL+Q+ TRL+AN F+REG++S F PV+PY P+ + +D Y RD+K
Sbjct: 417 VQISGDLDVAKHALVQITTRLKANFFEREGSLSGFQPVIPYHPLPASVADESKYLGRDAK 476
Query: 482 RHGRGPPYGGY-GSSDLAAGDSYGSYGSSQLGG 513
P GGY S D+ DSY +YGSSQ+ G
Sbjct: 477 LGHDYPYSGGYRASEDMLPVDSYANYGSSQVSG 509
>gi|115453243|ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|108708431|gb|ABF96226.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708432|gb|ABF96227.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|125586438|gb|EAZ27102.1| hypothetical protein OsJ_11034 [Oryza sativa Japonica Group]
gi|215686826|dbj|BAG89676.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695345|dbj|BAG90536.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704897|dbj|BAG94925.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 603 bits (1555), Expect = e-170, Method: Compositional matrix adjust.
Identities = 321/512 (62%), Positives = 405/512 (79%), Gaps = 11/512 (2%)
Query: 3 GQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G RNS+GKR +DYA++G KRR GDD + GP+DTVYRYLCP RKIGSIIGRGG
Sbjct: 5 GHRNSHGKR---HSDYAENGGGKRRNPGDD--TYAPGPDDTVYRYLCPSRKIGSIIGRGG 59
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
EI KQ+R DT++KIRIGE+V G +ERV+T++S+S ETN D + V PAQDALF+VH++
Sbjct: 60 EIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEK 119
Query: 123 VIAEELRGDEDSDGG-HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
+ ++ G+E+SD G QVT +LLVPSDQIGC+IGKGG I+Q IRS+TGA IR+L +E+L
Sbjct: 120 LSIDDDIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENL 179
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT 241
P+CA+ DEL+QISG+++VV+KAL Q++SRLHDNPSRSQHLLAS+++ + GS +G +
Sbjct: 180 PACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPYPV-GSHLGSS 238
Query: 242 AATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGK 301
+ P+VGI PL+ YGGYKGD AGDW S+Y R++ S+KEFSLRL+C +N+GGVIGK
Sbjct: 239 STAPVVGITPLISSYGGYKGDVAGDWP-SIYQPRREESSAKEFSLRLLCAASNVGGVIGK 297
Query: 302 GGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
GG II QIRQESGA IKVDSS+TE DDC+ITVS+KEFFED +S TI A V LQPRCSEK
Sbjct: 298 GGGIIKQIRQESGAFIKVDSSNTE-DDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKT 356
Query: 362 ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM 421
+ +S + S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+A+ED+EM
Sbjct: 357 DPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEM 416
Query: 422 VQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSK 481
VQISGDLD+ + AL+Q+ TRL+AN F+REGA+S F PV+PY P+ S+G Y RD+K
Sbjct: 417 VQISGDLDVVRHALLQITTRLKANFFEREGALSGFPPVIPYHPLPVGVSEGPKYLGRDTK 476
Query: 482 RHGRGPPYG-GY-GSSDLAAGDSYGSYGSSQL 511
G PY GY GS D+ DSY SYGSSQ+
Sbjct: 477 PLGHDYPYSSGYRGSDDIGPIDSYASYGSSQV 508
>gi|357112139|ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 542
Score = 598 bits (1543), Expect = e-168, Method: Compositional matrix adjust.
Identities = 319/512 (62%), Positives = 404/512 (78%), Gaps = 11/512 (2%)
Query: 3 GQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G RNS+GKR +DY+++G KRR GDD + GP+DTVYRYLC RKIGSIIGRGG
Sbjct: 5 GHRNSHGKR---HSDYSENGGGKRRNPGDD--TYAPGPDDTVYRYLCTSRKIGSIIGRGG 59
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
EI KQLR DT++KIRIGE+VPG +ERV+T++S+S ETN ED + V PAQDALF+VH++
Sbjct: 60 EIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRETNTIEDTEDKVCPAQDALFRVHEK 119
Query: 123 VIAEELRGDEDSDGG-HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
+IA++ GDE+++ G QVT +LLVPSDQIGC+IGKGG I+Q IRS+TG+QIR+L +E L
Sbjct: 120 LIADDGPGDEENEEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNERL 179
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT 241
P+C + DEL+QISG+ VV+KAL Q++SRLHDNPSRSQHL A ++ + GS G +
Sbjct: 180 PACGISGDELLQISGDPLVVRKALLQVSSRLHDNPSRSQHLQAPSLMQPYPV-GSRNGSS 238
Query: 242 AATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGK 301
+ P+VGIAP++ PYGGYKGD GDW S+Y R+D S+K+FSLRL+C +++GGVIGK
Sbjct: 239 STAPVVGIAPMVSPYGGYKGDMVGDWP-SIYQPRREDSSAKDFSLRLLCAASDVGGVIGK 297
Query: 302 GGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
GG II QIRQESGA IKVDSSS E DDC+ITVS+KEFFED +S TI+A VRLQP+CSEK
Sbjct: 298 GGGIIKQIRQESGAFIKVDSSSAE-DDCIITVSAKEFFEDPVSPTIDATVRLQPKCSEKT 356
Query: 362 ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM 421
+ +SG S+TTRLLV TS+IGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+ASED+EM
Sbjct: 357 DPESGEPSYTTRLLVSTSQIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEM 416
Query: 422 VQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSK 481
VQISGDL++A+ AL+Q+ TRL+AN F+REGA+S F PV+PY P+ + SD Y RD+K
Sbjct: 417 VQISGDLEVARHALVQITTRLKANFFEREGALSGFQPVIPYHPMPASISDEPKYLGRDTK 476
Query: 482 RHGRGPPY-GGY-GSSDLAAGDSYGSYGSSQL 511
G PY GGY S D+ DSY +YGSSQ+
Sbjct: 477 PAGHDYPYSGGYRASEDMLPVDSYANYGSSQI 508
>gi|413955311|gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
gi|413955312|gb|AFW87961.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 543
Score = 587 bits (1514), Expect = e-165, Method: Compositional matrix adjust.
Identities = 319/528 (60%), Positives = 401/528 (75%), Gaps = 24/528 (4%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
M+G RNS+GKR +DY + G KRR GDD + GP+DTVYRYLC RKIGSIIGR
Sbjct: 1 MSGHRNSHGKR---YSDYTETGGGKRRNPGDD--TYAPGPDDTVYRYLCASRKIGSIIGR 55
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEI KQLR +T++KIRIGE+VPG EERV+T++S+S TN +D + V PAQDALF+VH
Sbjct: 56 GGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTIDDAEDKVCPAQDALFRVH 115
Query: 121 DRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+R+ +E G+EDS+ QVT +LLVPSDQIGC++GKGG I+Q IRSETGAQIR+L +
Sbjct: 116 ERLATDESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKD 175
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
H+P+CA+ DEL+QISG+ VVKKALCQ++SRLH+NPS+SQHLLAS+++ + G+ +G
Sbjct: 176 HIPACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLASSLTQPYPG-GTHLG 234
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
++A P+VGI P++ PYGGYKGD AGDW SLY RD+ S+KEFSLRL+C AN+GGVI
Sbjct: 235 GSSAAPVVGITPVIPPYGGYKGDVAGDWP-SLYQPRRDESSAKEFSLRLLCAAANVGGVI 293
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTE-GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
GKGG II QIRQESGA IKV SS+++ DDC+ITVS+KEFFED +S TI+A VRLQ RCS
Sbjct: 294 GKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQLRCS 353
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
EK + + S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+A+ED
Sbjct: 354 EKSDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAED 413
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPY--IPVSENGSDGLNYE 476
+EMVQISG LD+A+ AL+Q+ TRL+AN F+REG++S F V+PY +P + SD Y
Sbjct: 414 EEMVQISGGLDVARHALVQIATRLKANFFEREGSLSAFPSVIPYHPLPAGVSVSDEPKYL 473
Query: 477 SRDSKRHGRGPPYGGY-------GSSDLAAGDSYGSYGSSQLGGTGSA 517
SRD+K P G Y S D+ DSY SYG SQ G G A
Sbjct: 474 SRDTK------PVGHYLYSSAFRTSDDMIPSDSYASYGGSQAPGGGYA 515
>gi|413955310|gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 528
Score = 587 bits (1513), Expect = e-165, Method: Compositional matrix adjust.
Identities = 319/528 (60%), Positives = 401/528 (75%), Gaps = 24/528 (4%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
M+G RNS+GKR +DY + G KRR GDD + GP+DTVYRYLC RKIGSIIGR
Sbjct: 1 MSGHRNSHGKR---YSDYTETGGGKRRNPGDD--TYAPGPDDTVYRYLCASRKIGSIIGR 55
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
GGEI KQLR +T++KIRIGE+VPG EERV+T++S+S TN +D + V PAQDALF+VH
Sbjct: 56 GGEIAKQLRTETQAKIRIGESVPGCEERVITIFSSSRRTNTIDDAEDKVCPAQDALFRVH 115
Query: 121 DRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+R+ +E G+EDS+ QVT +LLVPSDQIGC++GKGG I+Q IRSETGAQIR+L +
Sbjct: 116 ERLATDESFGNEDSEEISPQVTVRLLVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKD 175
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
H+P+CA+ DEL+QISG+ VVKKALCQ++SRLH+NPS+SQHLLAS+++ + G+ +G
Sbjct: 176 HIPACAISGDELLQISGDMVVVKKALCQVSSRLHNNPSKSQHLLASSLTQPYPG-GTHLG 234
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
++A P+VGI P++ PYGGYKGD AGDW SLY RD+ S+KEFSLRL+C AN+GGVI
Sbjct: 235 GSSAAPVVGITPVIPPYGGYKGDVAGDWP-SLYQPRRDESSAKEFSLRLLCAAANVGGVI 293
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTE-GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
GKGG II QIRQESGA IKV SS+++ DDC+ITVS+KEFFED +S TI+A VRLQ RCS
Sbjct: 294 GKGGGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQLRCS 353
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
EK + + S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+A+ED
Sbjct: 354 EKSDSELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAED 413
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPY--IPVSENGSDGLNYE 476
+EMVQISG LD+A+ AL+Q+ TRL+AN F+REG++S F V+PY +P + SD Y
Sbjct: 414 EEMVQISGGLDVARHALVQIATRLKANFFEREGSLSAFPSVIPYHPLPAGVSVSDEPKYL 473
Query: 477 SRDSKRHGRGPPYGGY-------GSSDLAAGDSYGSYGSSQLGGTGSA 517
SRD+K P G Y S D+ DSY SYG SQ G G A
Sbjct: 474 SRDTK------PVGHYLYSSAFRTSDDMIPSDSYASYGGSQAPGGGYA 515
>gi|326512112|dbj|BAJ96037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/514 (61%), Positives = 396/514 (77%), Gaps = 16/514 (3%)
Query: 3 GQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G RNS+GKR Q+DY+++G KRR GDD + GP+DTVYRYLC RKIGSIIGRGG
Sbjct: 5 GHRNSHGKR---QSDYSENGGGKRRNPGDD--TYAPGPDDTVYRYLCTSRKIGSIIGRGG 59
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
EI KQLR DT++KIRIGE+VP +ERV+T++S+S ETN ED + V PAQDALF+VH++
Sbjct: 60 EIAKQLRSDTQAKIRIGESVPACDERVITIFSSSRETNTIEDTEDKVCPAQDALFRVHEK 119
Query: 123 VIAEE---LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ ++ + +E+S G QVT +LLVPSDQIGC+IGKGG I+Q IRS+TG+QIR+L +E
Sbjct: 120 LATDDGPVNKENEESLG--QVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNE 177
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
HLP CA DEL+ I+G+ VV+KAL Q++SRLH NPSRSQHLLAS++ N GS +G
Sbjct: 178 HLPLCATSGDELLLITGDPMVVRKALLQVSSRLHGNPSRSQHLLASSL-NQPFPVGSRLG 236
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
++ P+VGI P++ PYG YKGD GDW S+Y R+ S KEFSLRL+C AN+GGVI
Sbjct: 237 SSSTAPVVGITPMVSPYGRYKGDMVGDWP-SIYQPRREVSSPKEFSLRLLCAAANVGGVI 295
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GKGG II QIRQESGA IKVDSSS E DDC+ITVS+KEFFED +S TI+A VRLQPRCSE
Sbjct: 296 GKGGGIIKQIRQESGAFIKVDSSSAE-DDCIITVSAKEFFEDPVSPTIDATVRLQPRCSE 354
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
KI+ +SG S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRI+ K+++PK+AS+D+
Sbjct: 355 KIDAESGEPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRIISKQDVPKVASDDE 414
Query: 420 EMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRD 479
EMV ISGDLD A+ AL+Q+ TRL+AN F+REGA+S F PV+PY P+ + SD Y SRD
Sbjct: 415 EMVLISGDLDFARHALLQITTRLKANFFEREGALSGFPPVIPYHPLPASVSDE-KYLSRD 473
Query: 480 SKRHGRGPPYG-GY-GSSDLAAGDSYGSYGSSQL 511
+K G PY GY S D+ D Y +YGSSQ+
Sbjct: 474 NKSAGHDYPYSSGYRASDDVLPVDRYANYGSSQV 507
>gi|224112243|ref|XP_002316129.1| predicted protein [Populus trichocarpa]
gi|222865169|gb|EEF02300.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 336/568 (59%), Positives = 408/568 (71%), Gaps = 40/568 (7%)
Query: 1 MAGQRNSYGKRS-HSQTDYADHGPNKRRYTGDD-RDQFIIGPEDTVYRYLCPIRKIGSII 58
MAGQRN YGKRS HSQ+DY G KRR GDD DQ I EDTVYRYLCP+RKIGSII
Sbjct: 1 MAGQRNDYGKRSQHSQSDY---GGGKRRNPGDDPSDQNTITNEDTVYRYLCPLRKIGSII 57
Query: 59 GRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFK 118
G+GGEI KQLR D+KS IRI E +PG +ER+VT+YS+S+ETN F + ++V PAQDALF
Sbjct: 58 GKGGEIAKQLRADSKSNIRISEAMPGYDERIVTIYSSSEETNLFGETGEYVCPAQDALFM 117
Query: 119 VHDRVIAEELRG-------DEDSDGG-HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
VHDRVIAE+L ED+ G QVT ++LVP+DQIGCVIGKGGQ++QNIRSET
Sbjct: 118 VHDRVIAEDLNNAAAEEEEGEDNFGEVQQVTVRMLVPADQIGCVIGKGGQVIQNIRSETC 177
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS 230
AQIRI KD+HLP AL DEL+ I GE S V+KAL Q+A+RLH+NPSRSQHL+ S+ +N
Sbjct: 178 AQIRITKDDHLPPLALSIDELLLIHGEPSAVRKALYQVATRLHENPSRSQHLILSSSANV 237
Query: 231 HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVC 290
H G V A P++G+ YG YK G WS S Y RD+ S+KEFSLRLVC
Sbjct: 238 H--GGVFVTANAGAPVLGL------YGNYK----GGWSSSFYPDQRDESSTKEFSLRLVC 285
Query: 291 PVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAV 350
P ANIGGVIGKGG II QIRQES A+IKVDSS EGDDC+I +S+KEFFED S T+ A
Sbjct: 286 PTANIGGVIGKGGGIIKQIRQESRASIKVDSSGAEGDDCIIFISAKEFFEDQ-SPTMNAA 344
Query: 351 VRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
+RLQPRCS+K E++SG TTRLLV S+IGCL+GKGG+II+EMR T+ANIRI+ ++N
Sbjct: 345 LRLQPRCSDKTEKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNQTRANIRIISEDN 404
Query: 411 LPKIASEDDEM----------VQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVL 460
LPK+A EDDEM VQI+G L++A +AL+QV+ RL+ANLF R+GA++ F P L
Sbjct: 405 LPKVAVEDDEMVQVNVYNFNSVQITGSLEVASNALLQVILRLKANLFGRDGALTAFPPAL 464
Query: 461 PYIPVSENGSDGLNYESRDSKRHGRGPPYGGYGSS--DLAAGDSYGSYGSSQLGGTGSAY 518
PYIP+S + SDG Y SRDS+ GRG G D+ DSYGS G S +GG S+Y
Sbjct: 465 PYIPMSLDTSDGSKYGSRDSQSRGRGYTSSSSGYGSRDVHPSDSYGSNGGSLIGGE-SSY 523
Query: 519 GSY-GSYSSGRSGSGLSSHAPVSRRKSY 545
G+Y G S G+GLS PVS+RK +
Sbjct: 524 GAYGGFSSGRSGGAGLSGQNPVSQRKHH 551
>gi|224098894|ref|XP_002311309.1| predicted protein [Populus trichocarpa]
gi|222851129|gb|EEE88676.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 539 bits (1389), Expect = e-150, Method: Compositional matrix adjust.
Identities = 286/456 (62%), Positives = 353/456 (77%), Gaps = 19/456 (4%)
Query: 34 DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVY 93
DQ + EDTVYRYLCP+RKIGSIIG+GGEI KQLR D+KS IRI E +PG +ERVVT++
Sbjct: 1 DQHTVTNEDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIF 60
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG--------HQVTAKLL 145
S+S+ETN FED ++V PAQDALF VHDRVIAE+L ++ QVT ++L
Sbjct: 61 SSSEETNLFEDTGEYVCPAQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQVTVRML 120
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
VP+DQIGCVIGKGGQ++QNIRSET AQIRI KDEHLP AL +DEL+ I GE SVV+KAL
Sbjct: 121 VPTDQIGCVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALSTDELLLIHGEPSVVRKAL 180
Query: 206 CQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAG 265
Q+A+RLH+NPSRSQHLL S+ +N++ S G V A APL+G YG YKG
Sbjct: 181 YQVATRLHENPSRSQHLLLSSSANTYQSGGMFVTANAG------APLLGLYGNYKGS--- 231
Query: 266 DWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
WS S Y RD+ S+K+FSLRLVCP+ANIGGVIGKGG II QIRQES A+IKVDSS E
Sbjct: 232 -WSSSFYPDQRDEASAKDFSLRLVCPIANIGGVIGKGGGIIKQIRQESRASIKVDSSGAE 290
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
G+DC+I +S+KEFFED S T+ A +R+QPRCSEK E++SG TTRLLV S+IGCL+
Sbjct: 291 GNDCIIFISAKEFFEDQ-SPTMNAALRMQPRCSEKTEKESGDSVITTRLLVGRSQIGCLM 349
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
GKGG+II+EMR LT+ANIRI+ ++NLPK+A EDDEMVQI+G L++A +AL+QV+ RL+AN
Sbjct: 350 GKGGAIISEMRNLTRANIRIISEDNLPKVAGEDDEMVQITGSLEVASNALLQVILRLKAN 409
Query: 446 LFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSK 481
+F R+GA++TF P LPYIPVS + SDG Y SRD +
Sbjct: 410 IFGRDGALTTFPPALPYIPVSLDTSDGPKYGSRDRQ 445
>gi|255562910|ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538345|gb|EEF39952.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 559
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 327/545 (60%), Positives = 394/545 (72%), Gaps = 36/545 (6%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQ---------FIIGPEDTVYRYLCPI 51
MAGQRN YGKRS++Q+DY G +R T DD + I EDTVYRYLCP+
Sbjct: 1 MAGQRNDYGKRSNAQSDYG--GGKRRNPTADDGEDSDHQQQQQQHTITNEDTVYRYLCPL 58
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
RKIGSIIGRGGEI KQLR ++KS IRI E + G EER+VT+YS S+E+N F D +FV P
Sbjct: 59 RKIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYSNSEESNLFGDSGEFVCP 118
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGG--------------HQVTAKLLVPSDQIGCVIGK 157
AQDALF VHDR+IAE+L +++ VT ++LVP+DQIGCVIGK
Sbjct: 119 AQDALFMVHDRIIAEDLNNSNNNNEEEDDEEEEEFGESKEQVVTVRMLVPADQIGCVIGK 178
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GGQ++Q+IRSETGAQIRILKDEHLP AL SDEL+ I GE +VV+KAL Q+A+RLH+NPS
Sbjct: 179 GGQVIQSIRSETGAQIRILKDEHLPPLALSSDELLLIIGEPAVVRKALYQVATRLHENPS 238
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
RSQHLL S+ S + SG G TP G A LMG YG YKG WS S YS RD
Sbjct: 239 RSQHLLLSSSSTNMYQSG---GGMFVTPTAG-ASLMGLYGSYKGG----WSSSYYSDQRD 290
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+ SSKEFSLRLVCP+ NIGGVIGKGG II QIRQES A+IKVDSS+ EGDDC+I +S+KE
Sbjct: 291 EGSSKEFSLRLVCPIGNIGGVIGKGGGIIKQIRQESRASIKVDSSAAEGDDCIIFISAKE 350
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
FFED SAT+ A +RLQPRCSEK ERDSG TTRLLVP S+IGCL+GKGG+II+EMR
Sbjct: 351 FFEDQ-SATLTAALRLQPRCSEKTERDSGDSVITTRLLVPRSQIGCLMGKGGAIISEMRN 409
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
+T+A+IRIL ++NLPK+ASEDDEMVQI+G D+A +AL+ V+ RL+ANLF R+GA++ F
Sbjct: 410 VTRASIRILAEDNLPKVASEDDEMVQITGSHDVASNALLHVVLRLKANLFGRDGALTAFP 469
Query: 458 PVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYGSS-DLAAGDSYGSYGSSQLGGTGS 516
P LPYIPVS + D Y +RDS+ GRG SS DL +SYG+ SS L G S
Sbjct: 470 PALPYIPVSMDMLDSPKYGNRDSQSRGRGYSSASGYSSRDLPPSESYGNNASS-LNGGES 528
Query: 517 AYGSY 521
YG+Y
Sbjct: 529 GYGAY 533
>gi|218192926|gb|EEC75353.1| hypothetical protein OsI_11789 [Oryza sativa Indica Group]
Length = 478
Score = 526 bits (1354), Expect = e-146, Method: Compositional matrix adjust.
Identities = 278/447 (62%), Positives = 357/447 (79%), Gaps = 6/447 (1%)
Query: 68 LRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEE 127
+R DT++KIRIGE+V G +ERV+T++S+S ETN D + V PAQDALF+VH+++ ++
Sbjct: 1 MRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKVCPAQDALFRVHEKLSIDD 60
Query: 128 LRGDEDSDGG-HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
G+E+SD G QVT +LLVPSDQIGC+IGKGG I+Q IRS+TGA IR+L +E+LP+CA+
Sbjct: 61 DIGNEESDEGLAQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAI 120
Query: 187 RSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPI 246
DEL+QISG+++VV+KAL Q++SRLHDNPSRSQHLLAS+++ + GS +G ++ P+
Sbjct: 121 SGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQHLLASSMTQPYPV-GSHLGSSSTAPV 179
Query: 247 VGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAII 306
VGI PL+ YGGYKGD AGDW S+Y R++ S+KEFSLRL+C +N+GGVIGKGG II
Sbjct: 180 VGITPLISSYGGYKGDVAGDWP-SIYQPRREESSAKEFSLRLLCAASNVGGVIGKGGGII 238
Query: 307 NQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSG 366
QIRQESGA IKVDSS+TE DDC+ITVS+KEFFED +S TI A V LQPRCSEK + +S
Sbjct: 239 KQIRQESGAFIKVDSSNTE-DDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKTDPESA 297
Query: 367 LISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
+ S+TTRLLV TSRIGCLIGKGGSIITE+RR ++ANIRIL KEN+PK+A+ED+EMVQISG
Sbjct: 298 IPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISG 357
Query: 427 DLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRG 486
DLD+ + AL+Q+ TRL+AN F+REGA+S F PV+PY P+ S+G Y RD+K G
Sbjct: 358 DLDVVRHALLQITTRLKANFFEREGALSGFPPVIPYHPLPVGVSEGPKYLGRDTKPLGHD 417
Query: 487 PPYG-GY-GSSDLAAGDSYGSYGSSQL 511
PY GY GS D++ DSY SYGSSQ+
Sbjct: 418 YPYSSGYRGSDDISPIDSYASYGSSQV 444
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 96/173 (55%), Gaps = 18/173 (10%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R LC +G +IG+GG I+KQ+R ++ + I++ + +E+ + SA + FED
Sbjct: 219 RLLCAASNVGGVIGKGGGIIKQIRQESGAFIKVDSS--NTEDDCIITVSAKE---FFEDP 273
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV---TAKLLVPSDQIGCVIGKGGQIV 162
VSP +A + R E +D + T +LLV + +IGC+IGKGG I+
Sbjct: 274 ---VSPTINAAVHLQPRC-------SEKTDPESAIPSYTTRLLVSTSRIGCLIGKGGSII 323
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
IR + A IRIL E++P A +E+VQISG+ VV+ AL QI +RL N
Sbjct: 324 TEIRRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVVRHALLQITTRLKAN 376
>gi|297849822|ref|XP_002892792.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
gi|297338634|gb|EFH69051.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 451 bits (1159), Expect = e-124, Method: Compositional matrix adjust.
Identities = 257/485 (52%), Positives = 336/485 (69%), Gaps = 33/485 (6%)
Query: 5 RNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEI 64
RN +GKRS+ Q++ +G +KRR DD DQ +IG E+TVYRYLCP++K GSIIG+GG+I
Sbjct: 6 RNIHGKRSNLQSELTGNGGSKRRNLHDDTDQNVIGSEETVYRYLCPVKKTGSIIGKGGDI 65
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI 124
KQ+R +TKS +RI E +PG EERVVT+YS ++E N F D + V PA DALFKVHD V+
Sbjct: 66 AKQIRSETKSNMRINEALPGCEERVVTIYSTNEELNHFGDDGELVCPALDALFKVHDMVV 125
Query: 125 AEELRGDEDSD---GGHQ-VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
A+ D + D G Q VT ++LVPSDQIGCVIGKGGQ++QN+R++T AQIR++KD H
Sbjct: 126 ADIDHDDGNDDDDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKD-H 184
Query: 181 LPSCALR--SDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLV 238
LPSCAL DEL+QI GE VV++AL Q+AS LH NPSR QHLL S+ S+ H G+++
Sbjct: 185 LPSCALTLSHDELLQIIGEPLVVREALYQVASLLHANPSRFQHLLLSSSSSMH-QPGAML 243
Query: 239 GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGV 298
A T S Y+ RD ++EF + +CP N+GGV
Sbjct: 244 MSAALTS----------------------SHRNYAVRRDIADAREFCVCFICPAENVGGV 281
Query: 299 IGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
IGKGG INQIRQE+GA I+V++S T+ DDC+I +SSKEF+ED S + A +RLQ RCS
Sbjct: 282 IGKGGGFINQIRQETGATIRVNTSETDEDDCIIVISSKEFYEDQ-SPAVNAAIRLQQRCS 340
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
EK+ +D+ ++ +TRLLV +S+IGCLIGKGG++I+EMR +T+ANIRIL KE++PKIA ED
Sbjct: 341 EKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIARED 400
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIP-VSENGSDGLNYES 477
+EMVQI+G+ D A AL QV+ RLRAN FD + + PYIP V+EN S Y
Sbjct: 401 EEMVQITGNPDAAMKALTQVILRLRANSFDMDHGLVLLPTSFPYIPQVTENSSKS-KYAK 459
Query: 478 RDSKR 482
RD R
Sbjct: 460 RDDHR 464
>gi|186478468|ref|NP_001117282.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|5080792|gb|AAD39302.1|AC007576_25 Unknown protein [Arabidopsis thaliana]
gi|332190995|gb|AEE29116.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 252/482 (52%), Positives = 330/482 (68%), Gaps = 31/482 (6%)
Query: 5 RNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEI 64
RN +GKRS+ Q+++ +G +KRR D+ DQ +I EDTVYRYLCP++K GSIIG+GGEI
Sbjct: 6 RNIHGKRSNLQSEFTGNGGSKRRNLHDETDQNVIASEDTVYRYLCPVKKTGSIIGKGGEI 65
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI 124
KQ+R +TKS +RI E +PG EERVVT+YS ++E N F D + V PA DALFKVHD V+
Sbjct: 66 AKQIRSETKSNMRINEALPGCEERVVTMYSTNEELNHFGDDGELVCPALDALFKVHDMVV 125
Query: 125 AEELRGDEDSD----GGHQ-VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
A+ + D D G Q VT ++LVPSDQIGCVIGKGGQ++QN+R++T AQIR++KD
Sbjct: 126 ADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIKD- 184
Query: 180 HLPSCALR--SDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSL 237
HLP+CAL DEL+ I GE VV++AL Q+AS LHDNPSR QHLL S+ S+S G++
Sbjct: 185 HLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPSRFQHLLLSSSSSSMHQPGAM 244
Query: 238 VGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGG 297
+ A T S Y+ RD ++EF + +CP N+GG
Sbjct: 245 LMSAALTS----------------------SHRNYAVRRDIADAREFCVCFICPAENVGG 282
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
VIGKGG INQIRQE+GA I+V++S T+ DDC+I +SSKEF+ED S + A +RLQ RC
Sbjct: 283 VIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFISSKEFYEDQ-SPAVNAAIRLQQRC 341
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASE 417
SEK+ +D+ ++ +TRLLV +S+IGCLIGKGG++I+EMR +T+ANIRIL KE++PKIA E
Sbjct: 342 SEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRILQKEDVPKIARE 401
Query: 418 DDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYES 477
D+EMVQI+G D A AL QV+ RLRAN FD + + PYIP S Y
Sbjct: 402 DEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGLVLLPTSFPYIPQVTESSSKSKYAK 461
Query: 478 RD 479
RD
Sbjct: 462 RD 463
>gi|297814608|ref|XP_002875187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321025|gb|EFH51446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 242/477 (50%), Positives = 317/477 (66%), Gaps = 44/477 (9%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
G EDTVYRYLCP+RK GSIIGRGGEI KQ+R +TK+ +RI E +PG +ERVVT+YS S+E
Sbjct: 14 GLEDTVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYSNSEE 73
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ------VTAKLLVPSDQIG 152
TN ED + FV PA DALFKVHD ++AEE D D D G + VT ++LVPSDQIG
Sbjct: 74 TNRIEDDEDFVCPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSERQTVTVRMLVPSDQIG 133
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL--RSDELVQISGEASVVKKALCQIAS 210
C+IGKGGQ++Q +R++T AQIR++ D +LP CAL DEL+QI G+ S V++AL Q+A
Sbjct: 134 CLIGKGGQVIQKLRNDTNAQIRVIND-NLPICALALSHDELLQIIGDPSAVREALYQVAF 192
Query: 211 RLHDNPSRSQ-HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
L+DNPSR Q + L+S+ + H G L+ P + S
Sbjct: 193 LLYDNPSRFQNYFLSSSSTLQHQPGGILMSPAITS-----------------------SH 229
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST-EGDD 328
YSAPRD ++ FS+ +CP N+GGVIGKGG INQ RQESGA IKV + T E DD
Sbjct: 230 KNYSAPRDAADARVFSICFICPAENVGGVIGKGGCFINQTRQESGATIKVHTPETDEDDD 289
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKG 388
C+I +S+KEFFED S T+ A +RLQ RCSEK+ +DS + +TR+L+P+S++GCLIGKG
Sbjct: 290 CIIFISAKEFFEDQ-SPTVNAALRLQTRCSEKVGKDSSDSAISTRVLIPSSQVGCLIGKG 348
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
G++I+EMR +TKANIRI E++P+IA E++EMVQI+G LD A AL QVM RLRAN+FD
Sbjct: 349 GALISEMRSVTKANIRIFQGEDVPRIARENEEMVQITGSLDAAIKALTQVMLRLRANVFD 408
Query: 449 REGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYGSSDLAAGDSYGS 505
+ + PYI S + S+ R G P +GS ++A + YGS
Sbjct: 409 MDRGLVLLPTFFPYI------SQTIETSSKPRHRKGENHP---HGSEEIARNEDYGS 456
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 133/336 (39%), Gaps = 88/336 (26%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
D + G + L P + G +IG+GG+I + IRSET A +RI +E LP C R
Sbjct: 9 DNNGAGLEDTVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRI--NEALPGCDERVVT 66
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ S E +R+ D+ V P A + +
Sbjct: 67 IYSNSEE-----------TNRIEDDE-------------------DFVCP-AFDALFKVH 95
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKE-FSLRLVCPVANIGGVIGKGGAIINQI 309
++ A ++ D+ S ++ ++R++ P IG +IGKGG +I ++
Sbjct: 96 DMI---------VAEEFDNDGDYDNGDEYSERQTVTVRMLVPSDQIGCLIGKGGQVIQKL 146
Query: 310 RQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT--LSATIEAVV-----------RLQP- 355
R ++ A I+V + + C + +S E + SA EA+ R Q
Sbjct: 147 RNDTNAQIRVINDNLP--ICALALSHDELLQIIGDPSAVREALYQVAFLLYDNPSRFQNY 204
Query: 356 --RCSEKIERDSG--LIS---------------------FTTRLLVPTSRIGCLIGKGGS 390
S ++ G L+S F+ + P +G +IGKGG
Sbjct: 205 FLSSSSTLQHQPGGILMSPAITSSHKNYSAPRDAADARVFSICFICPAENVGGVIGKGGC 264
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
I + R+ + A I++ + P+ +DD ++ IS
Sbjct: 265 FINQTRQESGATIKV----HTPETDEDDDCIIFISA 296
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI---LP--KENLPKIASEDD 419
+GL R L P + G +IG+GG I ++R TKAN+RI LP E + I S +
Sbjct: 13 AGLEDTVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYSNSE 72
Query: 420 EMVQISGDLDL---AKDALIQVMTRLRANLF 447
E +I D D A DAL +V + A F
Sbjct: 73 ETNRIEDDEDFVCPAFDALFKVHDMIVAEEF 103
>gi|118485588|gb|ABK94645.1| unknown [Populus trichocarpa]
Length = 294
Score = 441 bits (1135), Expect = e-121, Method: Compositional matrix adjust.
Identities = 229/296 (77%), Positives = 257/296 (86%), Gaps = 4/296 (1%)
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
MGPYGG+KGDT GDWSRSLYSAPRD+L+SKEFSLR+VCP ANIG VIGKGG IINQIRQE
Sbjct: 1 MGPYGGFKGDT-GDWSRSLYSAPRDELASKEFSLRVVCPTANIGAVIGKGGTIINQIRQE 59
Query: 313 SGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT 372
SGA IKVDSS EGDDCLIT+S+KE + D S TIEA VRLQPRCSEK+ERDSGLISFTT
Sbjct: 60 SGATIKVDSSVAEGDDCLITISAKEIY-DHYSPTIEAAVRLQPRCSEKMERDSGLISFTT 118
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
RLLVP+SRIGCL+GKGG+II EMR+LTKA IRI KENLPK+AS+DDEMVQI+GDLD+AK
Sbjct: 119 RLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAK 178
Query: 433 DALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGR-GPPYGG 491
DALIQ+ RLRAN+FDREGA+S +PVLPY+PVS GS+GLNY+SRD KRHGR GG
Sbjct: 179 DALIQISRRLRANVFDREGAMSAILPVLPYLPVSAEGSEGLNYDSRDGKRHGRGSSYAGG 238
Query: 492 YGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRSG-SGLSSHAPVSRRKSYY 546
Y SSD A+GD YGSYGSSQ+ +G YG+YGSYSSGR+G SGLS APVSRRKSYY
Sbjct: 239 YSSSDYASGDGYGSYGSSQINASGGPYGAYGSYSSGRTGTSGLSGQAPVSRRKSYY 294
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 107/193 (55%), Gaps = 18/193 (9%)
Query: 29 TGDDRDQFIIGPEDTV------YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
TGD P D + R +CP IG++IG+GG I+ Q+R ++ + I++ +V
Sbjct: 11 TGDWSRSLYSAPRDELASKEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSV 70
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
++ ++T+ +A E D + SP +A ++ R +E++ D G T
Sbjct: 71 AEGDDCLITI-------SAKEIYDHY-SPTIEAAVRLQPRC-SEKMERDS---GLISFTT 118
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+LLVPS +IGC++GKGG I+ +R T A IRI + E+LP A DE+VQI+G+ V K
Sbjct: 119 RLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDDDEMVQIAGDLDVAK 178
Query: 203 KALCQIASRLHDN 215
AL QI+ RL N
Sbjct: 179 DALIQISRRLRAN 191
>gi|110224788|emb|CAL07994.1| putative nucleic acid binding protein [Platanus x acerifolia]
Length = 288
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/278 (74%), Positives = 243/278 (87%)
Query: 189 DELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG 248
DEL+QI+GEASVVKKAL QI++RLHDNPSRSQHLL SA+SN+H S GSL GP A PIVG
Sbjct: 1 DELLQITGEASVVKKALYQISTRLHDNPSRSQHLLTSAMSNAHQSGGSLTGPNAGAPIVG 60
Query: 249 IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
+APLMGPYGGYKGDT +W + Y APRD +S+KEFSLRLVCP NIGGVIGKGG++I Q
Sbjct: 61 LAPLMGPYGGYKGDTGSEWPNAFYPAPRDSVSAKEFSLRLVCPTGNIGGVIGKGGSVIKQ 120
Query: 309 IRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLI 368
IRQESGA IKVDSS+ E DDC+I++SSKEFFED +S TI+A VRLQP+CSEK +R+SG
Sbjct: 121 IRQESGAFIKVDSSAAEADDCIISISSKEFFEDPISPTIDAAVRLQPKCSEKSDRESGDS 180
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
+FTTRLLVPTSRIGCLIGKGGSII+EMR++TKANIRIL KENLPK+ASEDDEMVQI+GDL
Sbjct: 181 TFTTRLLVPTSRIGCLIGKGGSIISEMRKVTKANIRILSKENLPKVASEDDEMVQITGDL 240
Query: 429 DLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVS 466
D+A++ALIQV TRL+ N F+REGA+S F P L Y+P+S
Sbjct: 241 DVARNALIQVTTRLKTNFFEREGALSAFPPPLSYLPMS 278
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 108/198 (54%), Gaps = 21/198 (10%)
Query: 28 YTGDD----RDQFIIGPEDTV------YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
Y GD + F P D+V R +CP IG +IG+GG ++KQ+R ++ + I+
Sbjct: 71 YKGDTGSEWPNAFYPAPRDSVSAKEFSLRLVCPTGNIGGVIGKGGSVIKQIRQESGAFIK 130
Query: 78 IGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG 137
+ + +++ ++++ S FED +SP DA ++ + + R DS
Sbjct: 131 VDSSAAEADDCIISISS----KEFFEDP---ISPTIDAAVRLQPKCSEKSDRESGDS--- 180
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE 197
T +LLVP+ +IGC+IGKGG I+ +R T A IRIL E+LP A DE+VQI+G+
Sbjct: 181 -TFTTRLLVPTSRIGCLIGKGGSIISEMRKVTKANIRILSKENLPKVASEDDEMVQITGD 239
Query: 198 ASVVKKALCQIASRLHDN 215
V + AL Q+ +RL N
Sbjct: 240 LDVARNALIQVTTRLKTN 257
>gi|30683629|ref|NP_172869.2| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana]
gi|110743444|dbj|BAE99608.1| hypothetical protein [Arabidopsis thaliana]
gi|332190993|gb|AEE29114.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 454
Score = 423 bits (1088), Expect = e-115, Method: Compositional matrix adjust.
Identities = 240/453 (52%), Positives = 310/453 (68%), Gaps = 31/453 (6%)
Query: 34 DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVY 93
DQ +I EDTVYRYLCP++K GSIIG+GGEI KQ+R +TKS +RI E +PG EERVVT+Y
Sbjct: 10 DQNVIASEDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMY 69
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD----GGHQ-VTAKLLVPS 148
S ++E N F D + V PA DALFKVHD V+A+ + D D G Q VT ++LVPS
Sbjct: 70 STNEELNHFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPS 129
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR--SDELVQISGEASVVKKALC 206
DQIGCVIGKGGQ++QN+R++T AQIR++KD HLP+CAL DEL+ I GE VV++AL
Sbjct: 130 DQIGCVIGKGGQVIQNLRNDTNAQIRVIKD-HLPACALTLSHDELLLIIGEPLVVREALY 188
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGD 266
Q+AS LHDNPSR QHLL S+ S+S G+++ A T
Sbjct: 189 QVASLLHDNPSRFQHLLLSSSSSSMHQPGAMLMSAALTS--------------------- 227
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
S Y+ RD ++EF + +CP N+GGVIGKGG INQIRQE+GA I+V++S T+
Sbjct: 228 -SHRNYAVRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDD 286
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIG 386
DDC+I +SSKEF+ED S + A +RLQ RCSEK+ +D+ ++ +TRLLV +S+IGCLIG
Sbjct: 287 DDCIIFISSKEFYEDQ-SPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIG 345
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGG++I+EMR +T+ANIRIL KE++PKIA ED+EMVQI+G D A AL QV+ RLRAN
Sbjct: 346 KGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANS 405
Query: 447 FDREGAVSTFVPVLPYIPVSENGSDGLNYESRD 479
FD + + PYIP S Y RD
Sbjct: 406 FDMDHGLVLLPTSFPYIPQVTESSSKSKYAKRD 438
>gi|388511497|gb|AFK43810.1| unknown [Lotus japonicus]
Length = 279
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 209/277 (75%), Positives = 242/277 (87%), Gaps = 4/277 (1%)
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
+YSAPRD+ S +EFS+R+VCP NIGGVIGKGGAIINQIRQ+SGA IKVDSS+TEGDDCL
Sbjct: 1 MYSAPRDEGSMREFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCL 60
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
I +S+KEFF+D+ S TIEA VRLQPRCS+K+ERDSG++SFTTRLLVP+SRIGCLIGKGG+
Sbjct: 61 IAISTKEFFDDSFSPTIEAAVRLQPRCSDKVERDSGIVSFTTRLLVPSSRIGCLIGKGGT 120
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
IITEMRRLTKANIRILPKE+LPKIASEDDEMVQISGDLD+AKDAL+QV+TRL+ANLFD+E
Sbjct: 121 IITEMRRLTKANIRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKANLFDKE 180
Query: 451 GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPY-GGYGS-SDLAAGDSYGSYGS 508
AV F+PV+PY+P S +GSDGLNY+SRD KRHGRG Y GYG SDL GDSYGSYGS
Sbjct: 181 RAVPGFLPVMPYLPASVDGSDGLNYDSRDGKRHGRGHSYSSGYGGLSDLPPGDSYGSYGS 240
Query: 509 SQLGGTGSAYGSYGSYSSGR-SGSGLSSHAPVSRRKS 544
Q+ G+G YG+YGSY GR S SGL S VSRR++
Sbjct: 241 PQV-GSGGPYGAYGSYGLGRTSTSGLPSQNGVSRRRN 276
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/170 (38%), Positives = 94/170 (55%), Gaps = 11/170 (6%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R +CP IG +IG+GG I+ Q+R D+ + I++ + ++ ++ + T F D
Sbjct: 17 RVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAI-----STKEFFD- 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D F SP +A ++ R + E G T +LLVPS +IGC+IGKGG I+ +
Sbjct: 71 DSF-SPTIEAAVRLQPRCSDKV----ERDSGIVSFTTRLLVPSSRIGCLIGKGGTIITEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
R T A IRIL E LP A DE+VQISG+ V K AL Q+ +RL N
Sbjct: 126 RRLTKANIRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQVLTRLKAN 175
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+ + +++ P+ IG VIGKGG I+ IR ++GA I++
Sbjct: 12 REFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKV 49
>gi|79317957|ref|NP_001031044.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|222424209|dbj|BAH20063.1| AT1G14170 [Arabidopsis thaliana]
gi|332190994|gb|AEE29115.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 446
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 236/446 (52%), Positives = 305/446 (68%), Gaps = 31/446 (6%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
DTVYRYLCP++K GSIIG+GGEI KQ+R +TKS +RI E +PG EERVVT+YS ++E N
Sbjct: 9 HDTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEELN 68
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD----GGHQ-VTAKLLVPSDQIGCVI 155
F D + V PA DALFKVHD V+A+ + D D G Q VT ++LVPSDQIGCVI
Sbjct: 69 HFGDDGELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVI 128
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALR--SDELVQISGEASVVKKALCQIASRLH 213
GKGGQ++QN+R++T AQIR++KD HLP+CAL DEL+ I GE VV++AL Q+AS LH
Sbjct: 129 GKGGQVIQNLRNDTNAQIRVIKD-HLPACALTLSHDELLLIIGEPLVVREALYQVASLLH 187
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
DNPSR QHLL S+ S+S G+++ A T S Y+
Sbjct: 188 DNPSRFQHLLLSSSSSSMHQPGAMLMSAALTS----------------------SHRNYA 225
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
RD ++EF + +CP N+GGVIGKGG INQIRQE+GA I+V++S T+ DDC+I +
Sbjct: 226 VRRDIADAREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSETDDDDCIIFI 285
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
SSKEF+ED S + A +RLQ RCSEK+ +D+ ++ +TRLLV +S+IGCLIGKGG++I+
Sbjct: 286 SSKEFYEDQ-SPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCLIGKGGAVIS 344
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
EMR +T+ANIRIL KE++PKIA ED+EMVQI+G D A AL QV+ RLRAN FD + +
Sbjct: 345 EMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRLRANSFDMDHGL 404
Query: 454 STFVPVLPYIPVSENGSDGLNYESRD 479
PYIP S Y RD
Sbjct: 405 VLLPTSFPYIPQVTESSSKSKYAKRD 430
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 38 IGPEDTV-YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
+G + TV R L P +IG +IG+GG++++ LR DT ++IR+
Sbjct: 107 LGEKQTVTVRMLVPSDQIGCVIGKGGQVIQNLRNDTNAQIRV 148
>gi|224077694|ref|XP_002305366.1| predicted protein [Populus trichocarpa]
gi|222848330|gb|EEE85877.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/260 (74%), Positives = 220/260 (84%), Gaps = 2/260 (0%)
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
MGPYG +KGDT GDWSRSLYSAPRD+L+SKEFSLR+VCP ANIG VIGKGG IINQIRQE
Sbjct: 1 MGPYGSFKGDT-GDWSRSLYSAPRDELASKEFSLRMVCPTANIGAVIGKGGTIINQIRQE 59
Query: 313 SGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT 372
SGA IKVDSS++EGDDCLIT+S+KE +D S TIEA +RLQPRCSEK+ERDSGL SFTT
Sbjct: 60 SGATIKVDSSASEGDDCLITISAKEICDDQYSPTIEAALRLQPRCSEKMERDSGLFSFTT 119
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
RLLVP+S IGCL+GKGG II EMR+LTKA IRI K+ LPK A +DDEMVQISGDLD+AK
Sbjct: 120 RLLVPSSHIGCLLGKGGLIIDEMRKLTKAIIRIPRKDKLPKTALDDDEMVQISGDLDIAK 179
Query: 433 DALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPY-GG 491
DALIQ+ RLRAN FDREG +S +PV PY+PVS G +G +Y+SRD KRHGRG Y GG
Sbjct: 180 DALIQISRRLRANAFDREGLMSAILPVFPYLPVSAEGLEGRHYDSRDDKRHGRGNTYAGG 239
Query: 492 YGSSDLAAGDSYGSYGSSQL 511
YG+SD A GDSYGSY S+Q+
Sbjct: 240 YGASDYAVGDSYGSYRSTQV 259
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 110/205 (53%), Gaps = 17/205 (8%)
Query: 29 TGDDRDQFIIGPEDTV------YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
TGD P D + R +CP IG++IG+GG I+ Q+R ++ + I++ +
Sbjct: 11 TGDWSRSLYSAPRDELASKEFSLRMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSA 70
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
++ ++T+ +A E D SP +A ++ R +E++ D G T
Sbjct: 71 SEGDDCLITI-------SAKEICDDQYSPTIEAALRLQPRC-SEKMERDS---GLFSFTT 119
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+LLVPS IGC++GKGG I+ +R T A IRI + + LP AL DE+VQISG+ + K
Sbjct: 120 RLLVPSSHIGCLLGKGGLIIDEMRKLTKAIIRIPRKDKLPKTALDDDEMVQISGDLDIAK 179
Query: 203 KALCQIASRLHDNPSRSQHLLASAI 227
AL QI+ RL N + L+++ +
Sbjct: 180 DALIQISRRLRANAFDREGLMSAIL 204
>gi|302767378|ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
gi|300165100|gb|EFJ31708.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
Length = 506
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 203/472 (43%), Positives = 287/472 (60%), Gaps = 57/472 (12%)
Query: 1 MAGQRNSYGKRSHSQ--TDYADHGPNKRRYTGDDRDQFIIGP--EDTVYRYLCPIRKIGS 56
M G R ++ KRSHSQ D D +RR G +R P +D VYR LCP KIGS
Sbjct: 1 MEGARYAH-KRSHSQFEEDSVDRSVRQRRRGGFERTPEAAAPPVDDVVYRILCPGAKIGS 59
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE--------DGDKF 108
+IG+GG I+K LR +T +KI++ + +PGS+ERV+ + ++ E + D DK
Sbjct: 60 VIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISASPRERREGKPRGGSKEMDKDKE 119
Query: 109 --------VSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+ +Q+ALFKV R++ E DED D VTA+LLVPS+QIGC++GK G+
Sbjct: 120 QNGEESTPLPASQEALFKVFARIVEGEEF-DEDEDSSRNVTARLLVPSNQIGCLLGKAGK 178
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I++ +R E+GAQIR+L E LP CA +DELVQ++GE ++VKKAL I++RL+DNP R +
Sbjct: 179 IIEQMRVESGAQIRVLPREQLPKCAYHTDELVQLTGELALVKKALTTISTRLYDNPPRDK 238
Query: 221 HLLASAISNSHSSS---GSLVGPTAATPI--VGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
A + S+ G+L+ P A P IAP+ G
Sbjct: 239 PPQAGHLGPFQESTILPGTLLPPGAFFPQGNASIAPVEG--------------------- 277
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
EF++RL+CP IG VIGKGG II IR+E+ A IK+ + ++ +I ++S
Sbjct: 278 -------EFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITS 330
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
E + +S +EAV++LQ R S+ G + TTR LVP++ IGCL+GK GSII +M
Sbjct: 331 NEVLHEQVSPALEAVLQLQSRISDPSAEKDG--AMTTRFLVPSANIGCLLGKKGSIIADM 388
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
RR T+ANIR+L KE LPK A EDDE+VQ+ GD+ +A+DA+I+++TRLRAN+F
Sbjct: 389 RRNTRANIRVLSKEALPKCAHEDDELVQVVGDITVARDAVIEIITRLRANIF 440
>gi|148905782|gb|ABR16055.1| unknown [Picea sitchensis]
Length = 650
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 220/562 (39%), Positives = 332/562 (59%), Gaps = 46/562 (8%)
Query: 9 GKRSHSQTDYADHGP-NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQ 67
GKR+ ++ D A++ NKRR +G R+Q + G + TVYR LCP IGS+IG+GG+++K
Sbjct: 7 GKRTRTEHDLAENNDRNKRRNSGTGREQTMPGADSTVYRILCPSNVIGSVIGKGGKVIKS 66
Query: 68 LRIDTKSKIRIGETVPGSEERVVTVYSA------SDETNAFEDGDKFVSPAQDALFKVHD 121
+R +T+SKIR+ + VPG +ERV+ ++S+ + + ++ ++ V PAQD L +VH
Sbjct: 67 MRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDDDDDDNENEPVCPAQDGLLRVHS 126
Query: 122 RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
++ E D D+D A+LLV + QIG +IGKGG +Q +RSE+GAQI+I + + L
Sbjct: 127 VIVQESSGKDNDADKKRPQDARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRKDEL 186
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ----HLLASAISNSHSSSGSL 237
P CA DELV ISG+A+ VKKAL +++ L +P + Q +L +S SG
Sbjct: 187 PGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHPPKEQIPWSVILPETNQSSLPPSGVP 246
Query: 238 VGPTA---------------ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP------- 275
P A + PI+G A + GGY + W S + P
Sbjct: 247 TFPPANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPALPSFSKFGN 306
Query: 276 -RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+S+EFS+R++CP IGGVIGKGG I +R ++GA+I+V+ + TE D+ +I VS
Sbjct: 307 STTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVS 366
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
+ E +D +S TIEAV+ LQ + S ++D + +TR LVP+ IGCL+GKGG+II+E
Sbjct: 367 ATELADDRVSPTIEAVLLLQGKTSGTTDKDGAI---STRFLVPSKHIGCLLGKGGNIISE 423
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DREGAV 453
MR+ T+ANIRI K+ P SE++E+VQ++G+ +AKDALIQ++ RLR N+F D++GA
Sbjct: 424 MRKQTRANIRIFRKDERPICVSENEELVQVTGEPGVAKDALIQILKRLRENIFKDKDGAS 483
Query: 454 STFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYGSSDLAAGDSYGSYGSSQLGG 513
+T VLP +S + L+ S ++++ P G A +G+ + G
Sbjct: 484 NTDS-VLPLSSLSVPSAVPLS-SSYGTRKYDIVSPRGAIAGRSAAGLSGFGALQA----G 537
Query: 514 TGSAYGSYGSYSSGRS-GSGLS 534
TGS Y S Y+ R+ G GLS
Sbjct: 538 TGS-YASLQPYAPTRTFGIGLS 558
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 107/331 (32%), Positives = 162/331 (48%), Gaps = 63/331 (19%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ R LCP KIG +IG+GG +K +R DT + IR+ + S+ERV+ V +
Sbjct: 314 EEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVV-------S 366
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E D VSP +A+ + + G D DG ++ + LVPS IGC++GKGG
Sbjct: 367 ATELADDRVSPTIEAVLLLQGKT-----SGTTDKDGA--ISTRFLVPSKHIGCLLGKGGN 419
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN----- 215
I+ +R +T A IRI + + P C ++ELVQ++GE V K AL QI RL +N
Sbjct: 420 IISEMRKQTRANIRIFRKDERPICVSENEELVQVTGEPGVAKDALIQILKRLRENIFKDK 479
Query: 216 --PSRSQHLL---------ASAISNSH--------SSSGSLVGPTAATPIVGIAPLMGPY 256
S + +L A +S+S+ S G++ G +AA + G L
Sbjct: 480 DGASNTDSVLPLSSLSVPSAVPLSSSYGTRKYDIVSPRGAIAGRSAAG-LSGFGALQAGT 538
Query: 257 GGYK-------------GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
G Y G + G + SL AP S EF++ P + + V+G+GG
Sbjct: 539 GSYASLQPYAPTRTFGIGLSGGHLNSSL--AP-----SHEFAI----PNSAVSSVLGRGG 587
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+ I+ IR+ SGA +K+ T D ++ +S
Sbjct: 588 SNISHIREISGATVKLRDPITGASDRVVEIS 618
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 329 bits (843), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 188/433 (43%), Positives = 276/433 (63%), Gaps = 27/433 (6%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA---SD 97
+D V+R LCP KIGS+IG+GG I+K LR ++ +KI+I + +PG +ERV+ + S +D
Sbjct: 1 DDVVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGND 60
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAE-ELRG----DEDSDGGHQVTAKLLVPSDQIG 152
+ + ++PAQ+ALFKVH R+IA+ E G D++ + QV +LLVP++QIG
Sbjct: 61 RGRGKDGNSEELTPAQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRLLVPNNQIG 120
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
C++GKGG+I++ +R TGAQIR+L + LP CAL +DELVQ+SG+ S +KKAL I++RL
Sbjct: 121 CLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKALLFISARL 180
Query: 213 HDNPSRS--QHLLASA----------ISNSHSSSGSLVGPTAATPIVGIAPLMG-PYGGY 259
+NP R Q A A +S+ S G T +G PL G +
Sbjct: 181 QENPPRDRPQSYAAPAPAFVPVTDYLAKDSYRSKG-----TGHVFGLGPEPLEGRSWTIS 235
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
G+ + D + S D E RL+CP IG VIGKGG+II+ +R+++GA IK+
Sbjct: 236 SGNLSLDRQDNRRSKEGRDSGENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKI 295
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTS 379
++ D+ +I VS+ E D+ S +EA++++Q R + ++ D I TTRLLVPT+
Sbjct: 296 ANAVPGSDERVIIVSALELPGDSFSPALEAMIQVQSRITAEMGGDKDGI-ITTRLLVPTN 354
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
+IGCL+GKGGSII +MRR T+ANIR+LPK+ LP+ A + DE+VQI GD +A++AL QV+
Sbjct: 355 QIGCLLGKGGSIIEDMRRATRANIRVLPKDTLPRCALDTDELVQIVGDTTVAREALFQVI 414
Query: 440 TRLRANLFDREGA 452
+RLR N F G+
Sbjct: 415 SRLRNNAFRESGS 427
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 128/200 (64%), Gaps = 19/200 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
D N+R G D G + V+R LCP KIGS+IG+GG I+ LR DT ++I+I
Sbjct: 242 DRQDNRRSKEGRDS-----GENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARIKIA 296
Query: 80 ETVPGSEERVVTVYSASDETNAFE-DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH 138
VPGS+ERV+ V +A E GD F SPA +A+ +V R+ A E+ GD+D
Sbjct: 297 NAVPGSDERVIIV-------SALELPGDSF-SPALEAMIQVQSRITA-EMGGDKDG---- 343
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+T +LLVP++QIGC++GKGG I++++R T A IR+L + LP CAL +DELVQI G+
Sbjct: 344 IITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIRVLPKDTLPRCALDTDELVQIVGDT 403
Query: 199 SVVKKALCQIASRLHDNPSR 218
+V ++AL Q+ SRL +N R
Sbjct: 404 TVAREALFQVISRLRNNAFR 423
>gi|302754958|ref|XP_002960903.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
gi|300171842|gb|EFJ38442.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
Length = 502
Score = 327 bits (838), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 201/470 (42%), Positives = 286/470 (60%), Gaps = 57/470 (12%)
Query: 1 MAGQRNSYGKRSHSQ--TDYADHGPNKRRYTGDDRDQFIIGP--EDTVYRYLCPIRKIGS 56
M G R ++ KRSHSQ D D +RR G +R P +D VYR LCP KIGS
Sbjct: 1 MEGARYAH-KRSHSQFEEDSVDRSVRQRRRGGFERTPEAAAPPVDDVVYRILCPGAKIGS 59
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVY------------SASDETNAFED 104
+IG+GG I+K LR +T +KI++ + +PGS+ERV+ + S + + ++
Sbjct: 60 VIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISPRERREGKPRGGSKEMDKDKEQN 119
Query: 105 GDKFVS-PA-QDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
G++ PA Q+ALFKV R++ E DED D VTA+LLVPS+QIGC++GK G+I+
Sbjct: 120 GEESTPLPASQEALFKVFARIVEGEE-FDEDEDSSRNVTARLLVPSNQIGCLLGKAGKII 178
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
+ +R E+GAQIR+L E LP CA +DEL ++GE ++VKKAL I++RL+DNP R +
Sbjct: 179 EQMRVESGAQIRVLPREQLPKCAYHTDEL--LTGELALVKKALTTISTRLYDNPPRDKPP 236
Query: 223 LASAISNSHSSS---GSLVGPTAATPI--VGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
A + S+ G+L+ P A P IAP+ G
Sbjct: 237 QAGHLGPFQESTILPGTLLPPGAFFPQGNASIAPVEG----------------------- 273
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
EF++RL+CP IG VIGKGG II IR+E+ A IK+ + ++ +I ++S E
Sbjct: 274 -----EFAVRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAVANAEERVIHITSNE 328
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
+ +S +EAV++LQ R S+ G + TTR LVP++ IGCL+GK GSII +MRR
Sbjct: 329 VLHEQVSPALEAVLQLQSRISDPSAEKDG--AMTTRFLVPSANIGCLLGKKGSIIADMRR 386
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
T+ANIR+L KE LPK A EDDE+VQ+ GD+ +A+DA+I+++TRLRAN+F
Sbjct: 387 NTRANIRVLSKEALPKCAHEDDELVQVVGDITVARDAVIEIITRLRANIF 436
>gi|357146815|ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 777
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 205/545 (37%), Positives = 302/545 (55%), Gaps = 57/545 (10%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLR 69
KR+H +D G KR + D P +TVYR LCP +KIGS++GRGG IVK LR
Sbjct: 16 KRTHFNSD---DGNRKRLNSRHDDGPMSSQPIETVYRILCPGKKIGSVLGRGGHIVKALR 72
Query: 70 IDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP------------AQDALF 117
+TK+KIR+ +++PG+EERV+ ++ D++ ++ + +S AQDAL
Sbjct: 73 EETKAKIRVADSIPGAEERVIIIFDYQDQSEQTDEAAQNISNNDGSENMKLQCFAQDALL 132
Query: 118 KVHDRVIAEELRGD----EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
K+HD++ E D E S+ VTA++LVP +Q+GC++GKGG I+Q +R++TGA I
Sbjct: 133 KIHDKISTHEDPHDGAIHEKSETAADVTARILVPGNQVGCLLGKGGSIIQQLRNDTGAGI 192
Query: 174 RILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHS- 232
RIL + LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I S
Sbjct: 193 RILPSQDLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENPPLEEIIDASTQR 252
Query: 233 --------SSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEF 284
+L+ P + PL+ PY S Y P ++EF
Sbjct: 253 KRESPPPLPHENLMLPYQHVDRLPPMPLLDPYRSRP---------SQYPVP----EAEEF 299
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFEDTL 343
S+R++C IG VIGK GA + Q+ Q++GA I V + + LI +SSKE D +
Sbjct: 300 SVRILCASELIGPVIGKSGANVRQVEQQTGARILVQELDKDASGERLIVLSSKEIPGDPV 359
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S IEA++ L + S E+ TRL+VP+S++GC++G+GG +ITEMRR A I
Sbjct: 360 SPAIEALILLHSKVSASSEKR----HLITRLVVPSSKVGCILGEGGKVITEMRRRIGAEI 415
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYI 463
R+ K + PK S D+E+VQ++G D+A+DAL ++ +RLR G+ + +P+ P
Sbjct: 416 RVYSKADKPKYLSFDEELVQVAGPPDIARDALTEIASRLRTRTLRDGGSGNNPLPLAP-- 473
Query: 464 PVSENGSDGLNYESRDSKRHGR--GPPYGGYGSSD----LAAGDSYGSYGSSQLGGTGSA 517
+G G + SR+ ++GR PPYG + LA YG S L G +
Sbjct: 474 ---SDGPRGDIFPSREFTQNGRPANPPYGRPANDSPYRRLAIDQPYGRPASDSLYGMPAN 530
Query: 518 YGSYG 522
YG
Sbjct: 531 DPIYG 535
>gi|125532489|gb|EAY79054.1| hypothetical protein OsI_34164 [Oryza sativa Indica Group]
gi|125575260|gb|EAZ16544.1| hypothetical protein OsJ_32017 [Oryza sativa Japonica Group]
Length = 769
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 201/511 (39%), Positives = 301/511 (58%), Gaps = 50/511 (9%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N+ KR H +D G KR + D P +T+YR LCP++KIGS++GRGG+IV
Sbjct: 19 NTSRKRPHFNSD---DGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIV 75
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDET-----NAFEDGDKFVSP---AQDALF 117
K LR TK+KIR+ +++PG++ERV+ +++ S +T N DG + + P AQDAL
Sbjct: 76 KALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALL 135
Query: 118 KVHDRVIAEE-LRG---DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
K+HD++ A+E L E S+ V A++LVP +Q+GC++GKGG I+Q +R++TGA I
Sbjct: 136 KIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGI 195
Query: 174 RILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS--- 230
R+L E+LP CAL+SDELVQISG +S+V+KAL +I++RLH +P + L I S
Sbjct: 196 RVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQR 255
Query: 231 -HSSSGSLVGPTAATPIVGI-----APLMGPYGGYKGDTAGDWSRSL--YSAPRDDLSSK 282
H + L P + + PL+ PY +R L +SA ++
Sbjct: 256 KHQAPPQLPHANPMLPHLHVDHSPQIPLLDPY----------RNRPLQYHSA-----EAE 300
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFED 341
EFS++++C +IG VIGK G + Q+ Q++GA ++V + ++ LI VSS+E +D
Sbjct: 301 EFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDD 360
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
+S TIEA++ L + S E TTRL+VP++++GC+IG+GG +ITEMRR T A
Sbjct: 361 PVSPTIEALILLHSKVSTLAENH----HLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGA 416
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
IR+ K + PK S D+E+VQ++G +A+ AL ++ +RLR R+G+ S P
Sbjct: 417 EIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTL-RDGSSSNN--PTP 473
Query: 462 YIPVSENGSDGL-NYESRDSKRHGRGPPYGG 491
+ P D L N E R PPYGG
Sbjct: 474 FAPFDGPPVDILPNREFMLYGRSANSPPYGG 504
>gi|115482708|ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|22128716|gb|AAM92828.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|110289325|gb|ABB47821.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|215694845|dbj|BAG90036.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 762
Score = 324 bits (831), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 199/509 (39%), Positives = 299/509 (58%), Gaps = 46/509 (9%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N+ KR H +D G KR + D P +T+YR LCP++KIGS++GRGG+IV
Sbjct: 12 NTSRKRPHFNSD---DGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIV 68
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDET-----NAFEDGDKFVSP---AQDALF 117
K LR TK+KIR+ +++PG++ERV+ +++ S +T N DG + + P AQDAL
Sbjct: 69 KALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALL 128
Query: 118 KVHDRVIAEE-LRG---DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
K+HD++ A+E L E S+ V A++LVP +Q+GC++GKGG I+Q +R++TGA I
Sbjct: 129 KIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGI 188
Query: 174 RILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS--- 230
R+L E+LP CAL+SDELVQISG +S+V+KAL +I++RLH +P + L I S
Sbjct: 189 RVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQR 248
Query: 231 -HSSSGSLVGPTAATPIVGI-----APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEF 284
H + L P + + PL+ PY + +SA ++EF
Sbjct: 249 KHQAPPQLPHANPMLPHLHVDHSPQIPLLDPY--------RNRPLQYHSA-----EAEEF 295
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTL 343
S++++C +IG VIGK G + Q+ Q++GA ++V + ++ LI VSS+E +D +
Sbjct: 296 SIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPV 355
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S TIEA++ L + S E TTRL+VP++++GC+IG+GG +ITEMRR T A I
Sbjct: 356 SPTIEALILLHSKVSTLAENH----HLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEI 411
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYI 463
R+ K + PK S D+E+VQ++G +A+ AL ++ +RLR R+G+ S P+
Sbjct: 412 RVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTL-RDGSSSNN--PTPFA 468
Query: 464 PVSENGSDGL-NYESRDSKRHGRGPPYGG 491
P D L N E R PPYGG
Sbjct: 469 PFDGPPVDILPNREFMLYGRSANSPPYGG 497
>gi|110289326|gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 677
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 199/509 (39%), Positives = 299/509 (58%), Gaps = 46/509 (9%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N+ KR H +D G KR + D P +T+YR LCP++KIGS++GRGG+IV
Sbjct: 12 NTSRKRPHFNSD---DGKRKRLNSRHDDGTISSEPIETIYRILCPVKKIGSVLGRGGDIV 68
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDET-----NAFEDGDKFVSP---AQDALF 117
K LR TK+KIR+ +++PG++ERV+ +++ S +T N DG + + P AQDAL
Sbjct: 69 KALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALL 128
Query: 118 KVHDRVIAEE-LRG---DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
K+HD++ A+E L E S+ V A++LVP +Q+GC++GKGG I+Q +R++TGA I
Sbjct: 129 KIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGI 188
Query: 174 RILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS--- 230
R+L E+LP CAL+SDELVQISG +S+V+KAL +I++RLH +P + L I S
Sbjct: 189 RVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKDNPPLEEIIDASTQR 248
Query: 231 -HSSSGSLVGPTAATPIVGI-----APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEF 284
H + L P + + PL+ PY + +SA ++EF
Sbjct: 249 KHQAPPQLPHANPMLPHLHVDHSPQIPLLDPY--------RNRPLQYHSA-----EAEEF 295
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTL 343
S++++C +IG VIGK G + Q+ Q++GA ++V + ++ LI VSS+E +D +
Sbjct: 296 SIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPV 355
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S TIEA++ L + S E TTRL+VP++++GC+IG+GG +ITEMRR T A I
Sbjct: 356 SPTIEALILLHSKVSTLAENH----HLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEI 411
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYI 463
R+ K + PK S D+E+VQ++G +A+ AL ++ +RLR R+G+ S P+
Sbjct: 412 RVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIASRLRTRTL-RDGSSSNN--PTPFA 468
Query: 464 PVSENGSDGL-NYESRDSKRHGRGPPYGG 491
P D L N E R PPYGG
Sbjct: 469 PFDGPPVDILPNREFMLYGRSANSPPYGG 497
>gi|414870928|tpg|DAA49485.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 770
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 183/465 (39%), Positives = 282/465 (60%), Gaps = 47/465 (10%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR+HS +D G KR T D P +T+YR LCP++KIGS++GRGG+
Sbjct: 7 RRSNSKKRTHSNSD---DGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK---------FVSP--A 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ +E ++ + F S A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFA 123
Query: 113 QDALFKVHDRVIAEELR----GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++++E+ DE S+ VTA++LV +Q+GC++GKGG I+Q +RS
Sbjct: 124 QDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSN 183
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 184 TGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIID 243
Query: 229 NS---HSSSGSLVGPTAATPIV-----GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
S S +L + P + PL+ PY S P+ ++
Sbjct: 244 ASTQRKRESPTLQHEYSMLPHLHSDHTPPIPLLDPY---------------RSGPQYPVT 288
Query: 281 -SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEF 338
++EFS+R++C IG VIGK GA + ++ Q++GA IKV + + LI +SS E
Sbjct: 289 ETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEI 348
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
+ +S IEA++ L + S E+ +TRL+VP+S++GC+IG+GG +IT+MRR
Sbjct: 349 PAEPISPAIEALILLHDKVSAPSEKHHS----STRLVVPSSKVGCIIGEGGKVITDMRRR 404
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T A IR+ K + PK S DDE+VQ++G +A+ AL ++ +RLR
Sbjct: 405 TGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 449
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
+G T L +P S +G ++G GG + E+R+++ A +R+ A + +V+I
Sbjct: 676 TGRFLSTIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAH-----AGSSESVVEI 730
Query: 425 SGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
G LD AK A + + AN ++ S+ +P+ P
Sbjct: 731 QGTLDQAKAAQSLLQGFISANSRQQQQPYSSRMPLYP 767
>gi|195655947|gb|ACG47441.1| nucleic acid binding protein [Zea mays]
gi|414870927|tpg|DAA49484.1| TPA: nucleic acid binding protein [Zea mays]
Length = 769
Score = 317 bits (811), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 184/468 (39%), Positives = 282/468 (60%), Gaps = 53/468 (11%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR+HS +D G KR T D P +T+YR LCP++KIGS++GRGG+
Sbjct: 7 RRSNSKKRTHSNSD---DGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK---------FVSP--A 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ +E ++ + F S A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFA 123
Query: 113 QDALFKVHDRVIAEELR----GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++++E+ DE S+ VTA++LV +Q+GC++GKGG I+Q +RS
Sbjct: 124 QDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSN 183
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 184 TGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIID 243
Query: 229 NS-----------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
S H S + TP + PL+ PY S P+
Sbjct: 244 ASTQRKRESPTLQHEYSMLPHLHSDHTPPI---PLLDPY---------------RSGPQY 285
Query: 278 DLS-SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSS 335
++ ++EFS+R++C IG VIGK GA + ++ Q++GA IKV + + LI +SS
Sbjct: 286 PVTETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISS 345
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
E + +S IEA++ L + S E+ +TRL+VP+S++GC+IG+GG +IT+M
Sbjct: 346 NEIPAEPISPAIEALILLHDKVSAPSEKHHS----STRLVVPSSKVGCIIGEGGKVITDM 401
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
RR T A IR+ K + PK S DDE+VQ++G +A+ AL ++ +RLR
Sbjct: 402 RRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 449
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 51/97 (52%), Gaps = 6/97 (6%)
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
+G +S T L +P S +G ++G GG + E+R+++ A +R+ A + +V+I
Sbjct: 676 TGFLS-TIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAH-----AGSSESVVEI 729
Query: 425 SGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
G LD AK A + + AN ++ S+ +P+ P
Sbjct: 730 QGTLDQAKAAQSLLQGFISANSRQQQQPYSSRMPLYP 766
>gi|147790774|emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 305 bits (781), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 212/500 (42%), Positives = 305/500 (61%), Gaps = 59/500 (11%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKR-RYTGDDRDQFIIGPE--DTVYRYLCPIRKIGSIIGR 60
+R S+ KR + Q + G NKR R+ +Q + DTVYR LCP +KIG +IG+
Sbjct: 33 RRGSFKKRPNFQ--FKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGK 90
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSAS----DETNAFEDGDKFVS------ 110
GG IVK LR +T++KI + ++VPGS+ERV+ +YSA E N+ ED ++
Sbjct: 91 GGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHNSNEDPEREEEQDHMEP 150
Query: 111 --PAQDALFKVHDRVIAEELRGD---EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
PAQDAL KVH+R+I E+L G ED + VTA+LLVP++ +GC++GK G ++Q +
Sbjct: 151 HCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRL 210
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
RSETGA IR+L EHLP+CA+ SDELVQISG+ +V KKAL ++++ LH NP + + +
Sbjct: 211 RSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPSSF 270
Query: 226 AIS---NSHSSSGSLVG--PTAATPI----------VGIAPLMGPY--------GGYKGD 262
+S G+ +G P P+ V P MG Y GG+ G
Sbjct: 271 PMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPSVVPGGFDGV 330
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
AG +S EFS++++CP IGGVIGKGG + Q++QE+GA+I V+ +
Sbjct: 331 HAGHGGE----------ASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 380
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIG 382
E ++ +I VSS E + S TIEA+++LQ + SE ++ TTRLLVP+S++G
Sbjct: 381 LAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKG----GMTTRLLVPSSKVG 436
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
C++G+GG +I EMRR T+A+IR+ KE+ PK AS+D+E+VQISG+ +AKDAL ++ +RL
Sbjct: 437 CILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRL 496
Query: 443 RAN-LFDREGAVSTFVPVLP 461
R L D G V PV P
Sbjct: 497 RVRCLRDANGGVEP-APVGP 515
>gi|359488265|ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
gi|296087281|emb|CBI33655.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 211/500 (42%), Positives = 304/500 (60%), Gaps = 59/500 (11%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKR-RYTGDDRDQFIIGPE--DTVYRYLCPIRKIGSIIGR 60
+R S+ KR + Q + G NKR R+ +Q + DTVYR LCP +KIG +IG+
Sbjct: 5 RRGSFKKRPNFQ--FKRKGSNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGGVIGK 62
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA---------SDETNAFEDGDKFVSP 111
GG IVK LR +T++KI + ++VPGS+ERV+ +YSA S+E E+ + P
Sbjct: 63 GGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHDSNEDPEMEEEQDHMEP 122
Query: 112 ---AQDALFKVHDRVIAEELRGD---EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
AQDAL KVH+R+I E+L G ED + VTA+LLVP++ +GC++GK G ++Q +
Sbjct: 123 HCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDVIQRL 182
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
RSETGA IR+L EHLP+CA+ SDELVQISG+ +V KKAL ++++ LH NP + + +
Sbjct: 183 RSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKPPSSF 242
Query: 226 AIS---NSHSSSGSLVG--PTAATPI----------VGIAPLMGPY--------GGYKGD 262
+S G+ +G P P+ V P MG Y GG+ G
Sbjct: 243 PMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPSVVPGGFDGV 302
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
AG +S EFS++++CP IGGVIGKGG + Q++QE+GA+I V+ +
Sbjct: 303 HAGHGGE----------ASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 352
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIG 382
E ++ +I VSS E + S TIEA+++LQ + SE ++ TTRLLVP+S++G
Sbjct: 353 LAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKG----GMTTRLLVPSSKVG 408
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
C++G+GG +I EMRR T+A+IR+ KE+ PK AS+D+E+VQISG+ +AKDAL ++ +RL
Sbjct: 409 CILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIASRL 468
Query: 443 RAN-LFDREGAVSTFVPVLP 461
R L D G V PV P
Sbjct: 469 RVRCLRDANGGVEP-APVGP 487
>gi|413933964|gb|AFW68515.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 768
Score = 305 bits (780), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 183/475 (38%), Positives = 278/475 (58%), Gaps = 34/475 (7%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR HS +D G KR + D P +T+YR LCP +KIGS++GRGG+
Sbjct: 7 RRSNSKKRRHSNSD---DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET--------NAFEDGDKFVSP---A 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ ++ DG + P A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFA 123
Query: 113 QDALFKVHDRVIAEELRG----DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++A+E+ DE SD VTA++LV +Q+GC++GKGG I+Q +RS+
Sbjct: 124 QDALLKIHDKIVADEIYDEVAHDESSD---DVTARILVQGNQVGCLLGKGGSIIQQLRSD 180
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 181 TGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIID 240
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS-SKEFSLR 287
S +P + M P+ S P+ +S ++EFS+R
Sbjct: 241 ASTQRKHE-------SPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQYPVSETEEFSIR 293
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFEDTLSAT 346
++C IG VIGK GA + ++ Q++GA IKV + + LI VSS E + +S T
Sbjct: 294 ILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPT 353
Query: 347 IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
IEA++ L + S E+ +TRL+VP++++GC++G+GG +ITEMRR T A IR+
Sbjct: 354 IEALILLHDKVSASSEKHHS----STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVY 409
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
K + PK S DE+VQ++G +A+ AL ++ +RLR + P P
Sbjct: 410 SKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLRTRTLRDTSTANNPPPFAP 464
>gi|414870926|tpg|DAA49483.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 541
Score = 303 bits (775), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 179/450 (39%), Positives = 273/450 (60%), Gaps = 47/450 (10%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR+HS +D G KR T D P +T+YR LCP++KIGS++GRGG+
Sbjct: 7 RRSNSKKRTHSNSD---DGKRKRLNTRHDDTSMFSEPIETIYRILCPVKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYS----------ASDETNAFEDGD-KFVSPA 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ A++E N+ G+ K A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFA 123
Query: 113 QDALFKVHDRVIAEELR----GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++++E+ DE S+ VTA++LV +Q+GC++GKGG I+Q +RS
Sbjct: 124 QDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSN 183
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 184 TGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIID 243
Query: 229 NS---HSSSGSLVGPTAATPIVG-----IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
S S +L + P + PL+ PY S P+ ++
Sbjct: 244 ASTQRKRESPTLQHEYSMLPHLHSDHTPPIPLLDPY---------------RSGPQYPVT 288
Query: 281 -SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEF 338
++EFS+R++C IG VIGK GA + ++ Q++GA IKV + + LI +SS E
Sbjct: 289 ETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEI 348
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
+ +S IEA++ L + S E+ +TRL+VP+S++GC+IG+GG +IT+MRR
Sbjct: 349 PAEPISPAIEALILLHDKVSAPSEKHHS----STRLVVPSSKVGCIIGEGGKVITDMRRR 404
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDL 428
T A IR+ K + PK S DDE+VQ +G +
Sbjct: 405 TGAEIRVYSKADKPKYLSFDDELVQAAGQI 434
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 106/208 (50%), Gaps = 44/208 (21%)
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
S++S P + + R++CPV IG V+G+GG I+ +R+E+ A I+V S D+
Sbjct: 35 SMFSEPIETI------YRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADER 88
Query: 330 LITV-------------------------SSKEFFEDTLSATIEAVVRLQPRCSEKI--- 361
+I + S F +D L + +V S++I
Sbjct: 89 VIIIFNYQNEPEPTDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIV------SDEIHDE 142
Query: 362 ----ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASE 417
E+ T R+LV +++GCL+GKGGSII ++R T A IR+LP ENLP+ A +
Sbjct: 143 VANDEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSNTGAGIRVLPSENLPQCALK 202
Query: 418 DDEMVQISGDLDLAKDALIQVMTRLRAN 445
DE+VQISG L + AL ++ TRL +
Sbjct: 203 SDELVQISGAPSLVRKALYEISTRLHQH 230
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 36/198 (18%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-----D 327
SAP + S S RLV P + +G +IG+GG +I +R+ +GA I+V S + + D
Sbjct: 368 SAPSEKHHS---STRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFD 424
Query: 328 DCLIT----VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
D L+ + +E + + SAT G T L +P S +G
Sbjct: 425 DELVQAAGQIHGREDYREPTSAT-------------------GRFLSTIELRIPNSSLGS 465
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
++G GG + E+R+++ A +R+ A + +V+I G LD AK A + +
Sbjct: 466 IVGAGGVNLAEIRQVSGARLRLHEAH-----AGSSESVVEIQGTLDQAKAAQSLLQGFIS 520
Query: 444 ANLFDREGAVSTFVPVLP 461
AN ++ S+ +P+ P
Sbjct: 521 ANSRQQQQPYSSRMPLYP 538
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 26/159 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + P K+G IIG GG+++ +R T ++IR VYS +D+
Sbjct: 379 RLVVPSSKVGCIIGEGGKVITDMRRRTGAEIR--------------VYSKADKPKYLSFD 424
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D+ V A ++H R E+ R + G T +L +P+ +G ++G GG + I
Sbjct: 425 DELVQ----AAGQIHGR---EDYREPTSATGRFLSTIELRIPNSSLGSIVGAGGVNLAEI 477
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
R +GA++R L + H S S+ +V+I G K A
Sbjct: 478 RQVSGARLR-LHEAHAGS----SESVVEIQGTLDQAKAA 511
>gi|413933963|gb|AFW68514.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 464
Score = 301 bits (770), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 181/461 (39%), Positives = 275/461 (59%), Gaps = 34/461 (7%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR HS +D G KR + D P +T+YR LCP +KIGS++GRGG+
Sbjct: 7 RRSNSKKRRHSNSD---DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE--------TNAFEDGDKFVSP---A 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ ++ DG + P A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFA 123
Query: 113 QDALFKVHDRVIAEEL----RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++A+E+ DE SD VTA++LV +Q+GC++GKGG I+Q +RS+
Sbjct: 124 QDALLKIHDKIVADEIYDEVAHDESSD---DVTARILVQGNQVGCLLGKGGSIIQQLRSD 180
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 181 TGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIID 240
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS-SKEFSLR 287
S +P + M P+ S P+ +S ++EFS+R
Sbjct: 241 ASTQRKHE-------SPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQYPVSETEEFSIR 293
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFEDTLSAT 346
++C IG VIGK GA + ++ Q++GA IKV + + LI VSS E + +S T
Sbjct: 294 ILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPT 353
Query: 347 IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
IEA++ L + S E+ +TRL+VP++++GC++G+GG +ITEMRR T A IR+
Sbjct: 354 IEALILLHDKVSASSEKHHS----STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVY 409
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
K + PK S DE+VQ++G +A+ AL ++ +RLR
Sbjct: 410 SKADKPKYLSFGDELVQVAGPPAIARGALTEIASRLRTRTL 450
>gi|147789387|emb|CAN73316.1| hypothetical protein VITISV_043333 [Vitis vinifera]
Length = 511
Score = 300 bits (769), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 149/235 (63%), Positives = 187/235 (79%), Gaps = 13/235 (5%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+DT+YRYLCP +KIGSII RG +IVKQ R+DTK KI IG+TV G EE VVT+Y+ S E+N
Sbjct: 290 KDTIYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFSIESN 349
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
F++ + FVSP Q+ LF+VHDRVI++E+ DE+ + + QIGCVIGKGGQ
Sbjct: 350 VFDNSNTFVSPTQNVLFRVHDRVISDEVH-DENFE-----------EASQIGCVIGKGGQ 397
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+Q+IRSE+GAQIRILKD+HLPS L SD+L+QISGE S+V KAL QIASRLHDNPS+SQ
Sbjct: 398 IIQSIRSESGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRLHDNPSQSQ 457
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
HLL + +SS GSL+GPT++ PI+G+APL+G YGGY+GD +GDWSRSLYSAP
Sbjct: 458 HLLVXTMPTGYSSGGSLMGPTSSAPIMGLAPLVGTYGGYRGD-SGDWSRSLYSAP 511
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 89/172 (51%), Gaps = 17/172 (9%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS----KE 337
K+ R +CP IG +I +G I+ Q R ++ I + + + ++ ++T+ +
Sbjct: 290 KDTIYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFSIESN 349
Query: 338 FFEDT---LSATIEAVVRLQPRC-SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
F+++ +S T + R+ R S+++ ++ S+IGC+IGKGG II
Sbjct: 350 VFDNSNTFVSPTQNVLFRVHDRVISDEVHDEN---------FEEASQIGCVIGKGGQIIQ 400
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
+R + A IRIL ++LP D+++QISG+ L AL Q+ +RL N
Sbjct: 401 SIRSESGAQIRILKDDHLPSRVLSSDKLIQISGEPSLVMKALYQIASRLHDN 452
>gi|242039239|ref|XP_002467014.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
gi|241920868|gb|EER94012.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
Length = 542
Score = 296 bits (758), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 176/452 (38%), Positives = 268/452 (59%), Gaps = 50/452 (11%)
Query: 8 YGK--RSHSQT-DYADHGPNKRRYTGDDRDQFIIG--PEDTVYRYLCPIRKIGSIIGRGG 62
YGK RS+S+ Y++ KR+ D + P +T+YR LCP++KIGS++GRGG
Sbjct: 3 YGKSRRSNSKKRTYSNSEDRKRKRLNSRHDDTSMSSEPVETIYRILCPVKKIGSVLGRGG 62
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE--------TNAFEDGDKFVSP--- 111
++VK LR +TK+KIR+ + +PG++ERV+ +++ ++ F DG + P
Sbjct: 63 DVVKALREETKAKIRVADPIPGADERVIIIFNYQNQPELTDEAAETKFSDGLGNMKPHCF 122
Query: 112 AQDALFKVHDRVIAEELRG----DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
AQDAL K+HD+++A+E+ +E S+ VTA++LV +Q+GC++GKGG I+Q +RS
Sbjct: 123 AQDALLKIHDKIVADEIHDGVAHEEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRS 182
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAI 227
+TGA IR+L E LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 183 DTGAGIRVLPSEDLPQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEII 242
Query: 228 SNS-HSSSGSLVGPTAATPIV--------GIAPLMGPY-GGYKGDTAGDWSRSLYSAPRD 277
+ S S + P++ PL+ PY G +
Sbjct: 243 NASTQRKRESPILLQHENPMLPHLHSDHPPPIPLLDPYRSGLQYHVT------------- 289
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSK 336
++EFS+R++C IG VIGK GA + ++ Q++GA IKV + + LI VSSK
Sbjct: 290 --ETEEFSIRILCASELIGSVIGKSGANVKRVEQQTGARIKVQEIDKDASGESLIIVSSK 347
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
E + +S IEA++ L + S E+ +TRL+VP+S++GC++G+GG +ITEMR
Sbjct: 348 EVPSEPISPAIEALILLHDKVSAPSEKRHS----STRLVVPSSKVGCILGEGGKVITEMR 403
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDL 428
R T A IR+ K + PK S DDE+VQ +G +
Sbjct: 404 RRTGAEIRVYSKADKPKYLSFDDELVQTAGQI 435
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 108/213 (50%), Gaps = 36/213 (16%)
Query: 266 DWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D R ++ DD S E R++CPV IG V+G+GG ++ +R+E+ A I+V
Sbjct: 21 DRKRKRLNSRHDDTSMSSEPVETIYRILCPVKKIGSVLGRGGDVVKALREETKAKIRVAD 80
Query: 322 SSTEGDDCLITVSSKEFFEDTLSATIEAVV--------RLQPRC---------SEKI--- 361
D+ +I + + +++ T EA ++P C +KI
Sbjct: 81 PIPGADERVIIIFN---YQNQPELTDEAAETKFSDGLGNMKPHCFAQDALLKIHDKIVAD 137
Query: 362 ---------ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
E+ T R+LV +++GCL+GKGGSII ++R T A IR+LP E+LP
Sbjct: 138 EIHDGVAHEEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLPSEDLP 197
Query: 413 KIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
+ A + DE+VQISG L + AL ++ TRL +
Sbjct: 198 QCALKSDELVQISGAPSLVRKALYEISTRLHQH 230
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 82/171 (47%), Gaps = 37/171 (21%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-----D 327
SAP + S S RLV P + +G ++G+GG +I ++R+ +GA I+V S + + D
Sbjct: 369 SAPSEKRHS---STRLVVPSSKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFD 425
Query: 328 DCLIT----VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
D L+ + +E + SAT G +S T L +P S +
Sbjct: 426 DELVQTAGQIHGREDYRGLTSAT-------------------GFLS-TIELRIPNSSLES 465
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
++G GG + E+R+++ A +R+ A + +V+I G L+ AK A
Sbjct: 466 IVGVGGVNLAEIRQISGARLRLHEAH-----AGSSESVVEIQGTLEEAKAA 511
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 27/159 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + P K+G I+G GG+++ ++R T ++IR VYS +D+
Sbjct: 380 RLVVPSSKVGCILGEGGKVITEMRRRTGAEIR--------------VYSKADKPKYLSFD 425
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D+ V A ++H R E+ RG S G T +L +P+ + ++G GG + I
Sbjct: 426 DELVQTAG----QIHGR---EDYRG-LTSATGFLSTIELRIPNSSLESIVGVGGVNLAEI 477
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
R +GA++R L + H S S+ +V+I G K A
Sbjct: 478 RQISGARLR-LHEAHAGS----SESVVEIQGTLEEAKAA 511
>gi|296087074|emb|CBI33448.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 294 bits (753), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 158/276 (57%), Positives = 190/276 (68%), Gaps = 29/276 (10%)
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
EI+KQLR+DTK KIRI ETV EE VVT+Y+ SDETNAF+D FVSP QDALF+VHD+
Sbjct: 8 EIIKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVSPTQDALFRVHDK 67
Query: 123 VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP 182
V++E++ ED + QVT +LLV SDQIGCVIGKGGQI+QNI SE+GAQI ILK++HL
Sbjct: 68 VVSEKVHS-EDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHLL 126
Query: 183 SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTA 242
SCAL DELVQISGE + L ++ +LH QHLLAS + +SS GSL+G
Sbjct: 127 SCALSFDELVQISGE----RPLLGRLFIKLHLFFMIIQHLLASIVPIGYSSGGSLIGD-- 180
Query: 243 ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKG 302
+GDWSRSLYS PRD+ SSKEFSLRLVCP+ N G+ GKG
Sbjct: 181 ---------------------SGDWSRSLYSVPRDEASSKEFSLRLVCPIGNTSGMFGKG 219
Query: 303 GAIINQIRQESGAAIKVDSSST-EGDDCLITVSSKE 337
IINQIR E A IKVDS+S E DCL+T+S K+
Sbjct: 220 SVIINQIRWEFRAIIKVDSTSVAEAYDCLVTISKKK 255
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 88/168 (52%), Gaps = 20/168 (11%)
Query: 305 IINQIRQESGAAIKVDSSSTEGDDCLITVSS----KEFFEDT---LSATIEAVVRLQPRC 357
II Q+R ++ I++D + + ++ ++T+ + F+D+ +S T +A+ R+ +
Sbjct: 9 IIKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVSPTQDALFRVHDKV 68
Query: 358 ------SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENL 411
SE E S + T +LLV + +IGC+IGKGG II + + A I IL ++L
Sbjct: 69 VSEKVHSEDFEEASQV---TVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDHL 125
Query: 412 PKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
A DE+VQISG+ + L ++ +L + +++ VP+
Sbjct: 126 LSCALSFDELVQISGE----RPLLGRLFIKLHLFFMIIQHLLASIVPI 169
>gi|224127654|ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|222870785|gb|EEF07916.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 293 bits (750), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 190/434 (43%), Positives = 282/434 (64%), Gaps = 40/434 (9%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
DTVYR LCP RKIG +IG+GG IVK LR +T+SKI + ++V GS+ERV+ +YS+SD+
Sbjct: 43 DTVYRILCPSRKIGGVIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPR 102
Query: 102 FEDGDKFV-------------SPAQDALFKVHDRVIAEELRG----DEDSDGGHQVTAKL 144
DGD+ + AQDAL KVHDR++ E+L G D+D+D + VTA+L
Sbjct: 103 KMDGDEGLPAGNGQQEAFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDNDN-NVVTARL 161
Query: 145 LVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
LVP++ +GCV+GK G ++Q +RSETGA IR+L +HLPSCA+ +DELVQISG+ +V K+A
Sbjct: 162 LVPNNMVGCVLGKRGDVIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRA 221
Query: 205 LCQIASRLHDNP-------------SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
L +I+ LH NP R+ H + +++N + +TP P
Sbjct: 222 LYEISILLHQNPRKDKLPSVPMPYGGRTFHPPSDSMANMLPPGNPMWPHRNSTP--HSMP 279
Query: 252 LMGPYGGYKGDTA-GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
MG YG + + G ++ R+ S EFS++++C IGGVIGKGG+ + ++
Sbjct: 280 WMGEYGNHPSEFGPGGFNGVPPGHGRE--PSAEFSMKILCSTGKIGGVIGKGGSNVKIVQ 337
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF 370
QE+GA+I V+ +S E ++ I VS+ E + S TI+A+++LQ + S+ E+ G+I
Sbjct: 338 QETGASIHVEDASAESEERAIRVSAFEGLWNPRSQTIDAILQLQDKTSDFSEK--GMI-- 393
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
TRLLVP+S++GC++G+GG +I EMRR +A+IR+ PK + PK AS+D+E+VQISG+ +
Sbjct: 394 ITRLLVPSSKVGCILGQGGQVINEMRRRLQADIRVYPKNDKPKCASDDEELVQISGNYGV 453
Query: 431 AKDALIQVMTRLRA 444
AKDAL ++ +RLRA
Sbjct: 454 AKDALAEIASRLRA 467
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 101/189 (53%), Gaps = 33/189 (17%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS----------- 335
R++CP IGGVIGKGG I+ +R+E+ + I V S D+ +I + S
Sbjct: 47 RILCPSRKIGGVIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKMDG 106
Query: 336 ----------KEFFEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLV 376
+E FE +A +A++++ R E+ + D+ ++ T RLLV
Sbjct: 107 DEGLPAGNGQQEAFEPHCAAQ-DALLKVHDRIVEEDLFGGMASDDDNDNNVV--TARLLV 163
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALI 436
P + +GC++GK G +I +R T ANIR+LP ++LP A + DE+VQISG +AK AL
Sbjct: 164 PNNMVGCVLGKRGDVIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRALY 223
Query: 437 QVMTRLRAN 445
++ L N
Sbjct: 224 EISILLHQN 232
>gi|413933965|gb|AFW68516.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 537
Score = 290 bits (743), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 175/442 (39%), Positives = 264/442 (59%), Gaps = 34/442 (7%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR HS +D G KR + D P +T+YR LCP +KIGS++GRGG+
Sbjct: 7 RRSNSKKRRHSNSD---DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE--------TNAFEDGDKFVSP---A 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ ++ DG + P A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFA 123
Query: 113 QDALFKVHDRVIAEEL----RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++A+E+ DE SD VTA++LV +Q+GC++GKGG I+Q +RS+
Sbjct: 124 QDALLKIHDKIVADEIYDEVAHDESSD---DVTARILVQGNQVGCLLGKGGSIIQQLRSD 180
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 181 TGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIID 240
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS-SKEFSLR 287
S +P + M P+ S P+ +S ++EFS+R
Sbjct: 241 ASTQRKHE-------SPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQYPVSETEEFSIR 293
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFEDTLSAT 346
++C IG VIGK GA + ++ Q++GA IKV + + LI VSS E + +S T
Sbjct: 294 ILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPT 353
Query: 347 IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
IEA++ L + S E+ +TRL+VP++++GC++G+GG +ITEMRR T A IR+
Sbjct: 354 IEALILLHDKVSASSEKHHS----STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVY 409
Query: 407 PKENLPKIASEDDEMVQISGDL 428
K + PK S DE+VQ +G +
Sbjct: 410 SKADKPKYLSFGDELVQAAGQI 431
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 27/207 (13%)
Query: 266 DWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D R S+ DD S E R++CP IG V+G+GG I+ +R+E+ A I+V
Sbjct: 21 DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVAD 80
Query: 322 SSTEGDDCLITV----SSKEFFEDTLSATI-EAVVRLQPRC------------------S 358
S D+ +I + + E ++ I + + ++P C
Sbjct: 81 SIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIY 140
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
+++ D T R+LV +++GCL+GKGGSII ++R T A IR+L ENLP+ A +
Sbjct: 141 DEVAHDESSDDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQS 200
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRAN 445
DE+VQISG L + AL ++ TRL +
Sbjct: 201 DELVQISGAPSLVRKALYEISTRLHQH 227
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 85/183 (46%), Gaps = 28/183 (15%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE------GDDCLITVSSKEF 338
S RLV P +G ++G+GG +I ++R+ +GA I+V S + + GD+ +
Sbjct: 374 STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQAAGQIHG 433
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
ED R P S G S T L +P S + ++G GG + E+R++
Sbjct: 434 LED---------YRGLPSAS-------GRFSSTIELRIPNSSLESIVGVGGVNLAEIRQI 477
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
+ A +R+ A + +V+I G LD AK A + + AN ++ S+ +P
Sbjct: 478 SGARLRLHEAH-----AGSSESVVEIQGTLDQAKAAQSLLEGFISANSRQQQSH-SSRMP 531
Query: 459 VLP 461
+ P
Sbjct: 532 LYP 534
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 26/159 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + P K+G I+G GG+++ ++R T ++IR VYS +D+ G
Sbjct: 376 RLVVPSNKVGCILGEGGQVITEMRRRTGAEIR--------------VYSKADKPKYLSFG 421
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D+ V A ++H E+ RG + G T +L +P+ + ++G GG + I
Sbjct: 422 DELVQAA----GQIHG---LEDYRGLPSASGRFSSTIELRIPNSSLESIVGVGGVNLAEI 474
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
R +GA++R L + H S S+ +V+I G K A
Sbjct: 475 RQISGARLR-LHEAHAGS----SESVVEIQGTLDQAKAA 508
>gi|255551350|ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 537
Score = 289 bits (740), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 188/438 (42%), Positives = 276/438 (63%), Gaps = 45/438 (10%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD-- 97
P DTVYR LCP RKIG +IG+GG I+K LR +T++KI + + VPGS+ERV+ +YS+ +
Sbjct: 42 PVDTVYRILCPSRKIGGVIGKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKI 101
Query: 98 -------ETNAFEDGDKFVSP---AQDALFKVHDRVIAEELRG----DEDSDGGHQVTAK 143
E E+ + P AQDAL KVHDR++ E+L G D+D++ G VTA+
Sbjct: 102 SRNHNDHEDLTMENEQDIMEPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGF-VTAR 160
Query: 144 LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKK 203
LLVP++ +GC++GK G ++Q +RSETGA IR+L +HLP+CA+ +DELVQIS + V KK
Sbjct: 161 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKK 220
Query: 204 ALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG--------------I 249
AL ++++ LH NP R + + S S GP P +G
Sbjct: 221 ALYEVSTLLHQNP-RKDKPPSVPMPYSGQSFHPPGGPMKNLPPLGSPMWPHHNSSHSIPP 279
Query: 250 APLMGPYG----GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAI 305
P+MG YG G+ D R + P S EFS++++C IGGVIGKGG+
Sbjct: 280 MPIMGRYGSQSSGFGPGGFDDVPRGHVAEP-----SAEFSMKILCSAGKIGGVIGKGGSN 334
Query: 306 INQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDS 365
+ ++Q++GA+I V+ +S E D+ +I VS+ E + S TI+A+++LQ + S+ E+
Sbjct: 335 VKVVQQDTGASIHVEDASAESDERVIRVSASEALWNPRSQTIDAILQLQNKTSDFSEKG- 393
Query: 366 GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
+ TTRLLVP+S++GC++G+GG +I EMRR T+A+IR+ K+ PK ASED+E+VQIS
Sbjct: 394 ---TITTRLLVPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDEKPKCASEDEELVQIS 450
Query: 426 GDLDLAKDALIQVMTRLR 443
G +AKDAL ++ +RLR
Sbjct: 451 GKFGVAKDALAEIASRLR 468
>gi|413933966|gb|AFW68517.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 428
Score = 288 bits (738), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 174/439 (39%), Positives = 263/439 (59%), Gaps = 34/439 (7%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+R++ KR HS +D G KR + D P +T+YR LCP +KIGS++GRGG+
Sbjct: 7 RRSNSKKRRHSNSD---DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGD 63
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE--------TNAFEDGDKFVSP---A 112
IVK LR +TK+KIR+ +++PG++ERV+ +++ ++ DG + P A
Sbjct: 64 IVKALREETKAKIRVADSIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFA 123
Query: 113 QDALFKVHDRVIAEEL----RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
QDAL K+HD+++A+E+ DE SD VTA++LV +Q+GC++GKGG I+Q +RS+
Sbjct: 124 QDALLKIHDKIVADEIYDEVAHDESSD---DVTARILVQGNQVGCLLGKGGSIIQQLRSD 180
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
TGA IR+L E+LP CAL+SDELVQISG S+V+KAL +I++RLH +P + L I
Sbjct: 181 TGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQIID 240
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS-SKEFSLR 287
S +P + M P+ S P+ +S ++EFS+R
Sbjct: 241 ASTQRKHE-------SPTLQHENPMLPHLHSHHPPPIPLLDPYRSGPQYPVSETEEFSIR 293
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFEDTLSAT 346
++C IG VIGK GA + ++ Q++GA IKV + + LI VSS E + +S T
Sbjct: 294 ILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPT 353
Query: 347 IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
IEA++ L + S E+ +TRL+VP++++GC++G+GG +ITEMRR T A IR+
Sbjct: 354 IEALILLHDKVSASSEKHHS----STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVY 409
Query: 407 PKENLPKIASEDDEMVQIS 425
K + PK S DE+VQ++
Sbjct: 410 SKADKPKYLSFGDELVQVT 428
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 106/207 (51%), Gaps = 27/207 (13%)
Query: 266 DWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D R S+ DD S E R++CP IG V+G+GG I+ +R+E+ A I+V
Sbjct: 21 DGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVAD 80
Query: 322 SSTEGDDCLITV----SSKEFFEDTLSATI-EAVVRLQPRC------------------S 358
S D+ +I + + E ++ I + + ++P C
Sbjct: 81 SIPGADERVIIIFNYQNQPELTDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIY 140
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
+++ D T R+LV +++GCL+GKGGSII ++R T A IR+L ENLP+ A +
Sbjct: 141 DEVAHDESSDDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLSSENLPQCALQS 200
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRAN 445
DE+VQISG L + AL ++ TRL +
Sbjct: 201 DELVQISGAPSLVRKALYEISTRLHQH 227
>gi|359386146|gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 280 bits (715), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 177/440 (40%), Positives = 266/440 (60%), Gaps = 42/440 (9%)
Query: 2 AGQRNSYGKRSHSQTDYADH-GPNKRRYTGDDRDQFI--IGPEDTVYRYLCPIRKIGSII 58
A +RN + KR ++Q G K ++ R+Q P DTVYR LCP RKIG +I
Sbjct: 3 ASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVI 62
Query: 59 GRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA---------SDETNAFEDGDKFV 109
G+ G IVK LR +T++KI + +T+PGSEERV+ +YS+ D+ +A E + +
Sbjct: 63 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 122
Query: 110 SP---AQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIGCVIGKGGQIVQ 163
P AQDAL KVHDR+I E+L G SD ++ +TA+LLVP++ +GC++GK G ++Q
Sbjct: 123 EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 182
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR----S 219
+RSETGA IR+L + LP CA+ +DE+VQISG+ +V K+AL ++++ LH NP + S
Sbjct: 183 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPS 242
Query: 220 QHLLASAISNSHSSSGSLV---------GPTAATPIVGI--APLMGPYGGYKGDTAGDWS 268
A N HS + P + + G+ P MG YG S
Sbjct: 243 SFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMG---S 299
Query: 269 RSLYSAPRDDLS--SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
S+ S P + S EFS++++C IGGVIGKGG + Q++QE+GA+I V+ + T+
Sbjct: 300 GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS 359
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIG 386
D+ +I S+ E + S TI+A+++LQ + SE E+ + TTRLLVP+S++GC++G
Sbjct: 360 DERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TITTRLLVPSSKVGCILG 415
Query: 387 KGGSIITEMRRLTKANIRIL 406
+GG +I EMRR T+A+IR++
Sbjct: 416 QGGHVINEMRRRTQADIRVV 435
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 96/300 (32%), Positives = 137/300 (45%), Gaps = 39/300 (13%)
Query: 258 GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
G G G+WS S + + R++CP IGGVIGK G I+ +R+E+ A I
Sbjct: 21 GVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKI 80
Query: 318 KVDSSSTEGDDCLITVSS------KEFFEDTLSATIEAVVRLQPRCSEK----------I 361
V + ++ +I + S K +D SA ++P C+ + I
Sbjct: 81 TVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRII 140
Query: 362 ERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENL 411
E D G+ S T RLLVP + +GCL+GK G +I +R T ANIR+LP + L
Sbjct: 141 EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRL 200
Query: 412 PKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVL-------PYIP 464
P A DEMVQISG ++AK AL +V T L N ++ S+F P P
Sbjct: 201 PPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNP-RKDKPPSSFPQAYGGQNFHSPPAP 259
Query: 465 VSENGSDG-LNYESRDSKRHGR--GPPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSY 521
+++ G ++ +R+S HG P GGYG G GS S G G +
Sbjct: 260 MADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGS--GSINSCPPGQMGEVSAEF 317
>gi|356518382|ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 676
Score = 275 bits (703), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 179/502 (35%), Positives = 270/502 (53%), Gaps = 60/502 (11%)
Query: 22 GPN---KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
GPN KRR + + P V+R LC +IG +IG+GG I+ Q+R +T K+RI
Sbjct: 10 GPNGRGKRRRSSGGFSSLGVSPGSVVFRLLCHASRIGGVIGKGGSIISQIRQETGVKLRI 69
Query: 79 GETVPGSEERVVTVYSASDET-----------NAFEDG--------------------DK 107
E VPG +ERV+T+ + ET N +DG +K
Sbjct: 70 EEAVPGCDERVITISGSEKETEEDNTEQGKEVNDNDDGGSEGKDREEKDDGDGNEDKREK 129
Query: 108 FVSPAQD--------ALFK----VHDRVIA---EELRGDEDSDGGHQVTAKLLVPSDQIG 152
P +D A++K V +R++ E GDE+S+ +LL+ + Q+G
Sbjct: 130 DAVPVEDSKSEKGNSAIWKAISLVFERMVEGVEETTEGDEESNKPSSFFLRLLILTAQVG 189
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
CV+GKGG +++ + +E+GAQIRIL + LP+CA SDE+VQISG VV+KAL ++ +L
Sbjct: 190 CVLGKGGSVIKRMAAESGAQIRILPKDKLPACASASDEIVQISGSVEVVRKALQSVSQQL 249
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-GPYGGYKGDTAGDWSRSL 271
+NP R L++ + S S P + P GP+ +A
Sbjct: 250 LENPPRDHDSLSAKSTGPSSHSFGQFPPHNRSFSAQGEPFASGPHDISAFHSAAPLIPKF 309
Query: 272 YSAP---RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ A R + + RL+CP +G +IGKGGAII ++QE+ + IKV + + +D
Sbjct: 310 HEAAIHGRMRPLQEMLTFRLLCPAERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDSED 369
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKG 388
C+I +S ED +S EAV R+Q R ++ I I R LV +++IGCL+GKG
Sbjct: 370 CVIVISGPAHPEDRISPVQEAVFRVQTRIAKPIPDAKDHI-MLARFLVSSTQIGCLLGKG 428
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF- 447
GSIITEMR+ + A+IRIL K+ +PK ASED+E++Q++G+++ DAL+Q+ TRL+ + F
Sbjct: 429 GSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALLQITTRLKHHCFR 488
Query: 448 DREGAV-----STFVPVLPYIP 464
D +V S F+ LP P
Sbjct: 489 DSYPSVNYPSNSPFLDQLPPFP 510
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 121/221 (54%), Gaps = 26/221 (11%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E +R LCP ++G+IIG+GG I+K ++ +T S+I++ E P SE+ V+ + + +
Sbjct: 323 EMLTFRLLCPAERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDSEDCVIVISGPAHPED 382
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+SP Q+A+F+V R IA+ + +D H + A+ LV S QIGC++GKGG
Sbjct: 383 R-------ISPVQEAVFRVQTR-IAKPIPDAKD----HIMLARFLVSSTQIGCLLGKGGS 430
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ +R ++GA IRIL + +P CA +E++Q++GE V AL QI +RL + R
Sbjct: 431 IITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALLQITTRLKHHCFRDS 490
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ + SNS P + P PY G +G
Sbjct: 491 YPSVNYPSNS--------------PFLDQLPPFPPYLGRRG 517
>gi|356507955|ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 678
Score = 274 bits (701), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 175/504 (34%), Positives = 272/504 (53%), Gaps = 62/504 (12%)
Query: 22 GPN---KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
GPN KRR + + P V+R LC +IGS+IG+GG I+ Q+R++T K++I
Sbjct: 10 GPNGRGKRRKSSGGFSPLDVSPGSVVFRLLCHASRIGSVIGKGGSIISQIRLETGVKVKI 69
Query: 79 GETVPGSEERVVTVYSASDETNAF------------------EDGD-------------- 106
E VPG +ERV+T+ + E + +DG+
Sbjct: 70 EEAVPGCDERVITISGSDKEAEEYTAEQGKEVNDNDDVGSEGKDGEEKNGSDGNGNEDKE 129
Query: 107 -KFVSPAQD--------ALFK----VHDRVIA---EELRGDEDSDGGHQVTAKLLVPSDQ 150
K P +D A++K V +R++ E GDE+S+ +LL+ + Q
Sbjct: 130 EKDAVPVEDSKSEKGNSAIWKAISLVFERMVEGVEETTEGDEESNKSSSFFLRLLILTAQ 189
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
+GCV+GKGG +++ + +E+GAQIRIL + +P CA DE+VQISG VV+KAL ++
Sbjct: 190 VGCVLGKGGSVIKRMAAESGAQIRILPKDKVPVCASAFDEIVQISGSVEVVRKALQSVSQ 249
Query: 211 RLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL-MGPYGGYKGDTAGDWSR 269
+L +NP R L++ + S S P + P GP+ +A
Sbjct: 250 QLLENPPRDHESLSAKSTGPSSHSFGQFPPHNHSFAAQGEPFATGPHDISAFHSAPPLIP 309
Query: 270 SLYSAP---RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
+ A R + + RL+CPV +G +IGKGGAII ++QE+ + IKV + +
Sbjct: 310 KFHEAAIHGRTRPLQEMLTFRLLCPVERVGNIIGKGGAIIKTVQQETVSEIKVLEAPPDS 369
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIG 386
+DC+I +S ED +S EAV R+Q R ++ I D+ + R LV +++IGCL+G
Sbjct: 370 EDCVIVISGPAHPEDRVSPVQEAVFRVQTRIAKPIP-DANDHTMLARFLVSSNQIGCLLG 428
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGGSIITEMR+ + A+IRIL K+ +PK ASED+E++Q++G+++ +AL+Q+ TRL+ +
Sbjct: 429 KGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHEALLQITTRLKHHF 488
Query: 447 F-DREGAV-----STFVPVLPYIP 464
F D +V S F+ LP P
Sbjct: 489 FRDSYPSVNYPSNSPFLDQLPPFP 512
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 123/221 (55%), Gaps = 26/221 (11%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E +R LCP+ ++G+IIG+GG I+K ++ +T S+I++ E P SE+ V+ + + +
Sbjct: 325 EMLTFRLLCPVERVGNIIGKGGAIIKTVQQETVSEIKVLEAPPDSEDCVIVISGPAHPED 384
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
VSP Q+A+F+V R IA+ + D H + A+ LV S+QIGC++GKGG
Sbjct: 385 R-------VSPVQEAVFRVQTR-IAKPIPDAND----HTMLARFLVSSNQIGCLLGKGGS 432
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ +R ++GA IRIL + +P CA +E++Q++GE V +AL QI +RL + R
Sbjct: 433 IITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHEALLQITTRLKHHFFRDS 492
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ + SNS P + P PY G +G
Sbjct: 493 YPSVNYPSNS--------------PFLDQLPPFPPYLGRRG 519
>gi|302803919|ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
gi|300148549|gb|EFJ15208.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
Length = 668
Score = 274 bits (700), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 167/451 (37%), Positives = 253/451 (56%), Gaps = 55/451 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE------ 98
+R LCP +IGS+IG+GG I+K LR T +KI+I + +PGS+ERV+ + + E
Sbjct: 62 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 121
Query: 99 -------------------TNAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDED----- 133
+ + +G PAQ ALFKVH R++ A++ D D
Sbjct: 122 YPAGSGGGSAAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDSV 181
Query: 134 -SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
D +V ++LVP +Q+GC++GK G+I++ +R ETG+QIRIL E LP CAL +DE+V
Sbjct: 182 EEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEVV 241
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
Q+ G+ VK+AL I++RL DNP + + AS S + G A+ P +
Sbjct: 242 QVVGDRPSVKRALNAISTRLLDNPPKDRPSSASFQSGNFGGGSRSSGFPASEPYIPQHTS 301
Query: 253 MGPYGGYKGDT---AGDWSRSLYSAPRDDLSS-----------KEFSLRLVCPVANIGGV 298
+ P + + +GD L LS +E R++CP IG +
Sbjct: 302 LAPQTRLRAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGNI 361
Query: 299 IGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
IGK I +++E+GA I V + ++ +I VS+ E +D LS EAV +Q
Sbjct: 362 IGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDDLSPAQEAVFHIQ---- 414
Query: 359 EKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIAS 416
+K+ D G S TRLLVP++ +GCL+GKGG+II+EMR T+A IR+L +E LP A
Sbjct: 415 DKLRDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPLCAL 474
Query: 417 EDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
++DE+VQ+ G++ +A+DAL+Q+ +RLRANL+
Sbjct: 475 DNDEVVQVLGEIRVARDALVQITSRLRANLY 505
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 121/369 (32%), Positives = 177/369 (47%), Gaps = 48/369 (13%)
Query: 11 RSHSQTDYADHGPNKRRYTGDDRDQFIIG------PEDTVYRYLCPIRKIGSIIGRGGEI 64
R+ ++D D+G R T +F G E+ V+R LCP KIG+IIG+
Sbjct: 309 RAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGNIIGK---F 365
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI 124
++ L+ +T +KI + + VPG EERV+ V +A E D +SPAQ+A+F + D+
Sbjct: 366 IQTLQEETGAKINVPDAVPGCEERVIIV-------SAVESPDDDLSPAQEAVFHIQDK-- 416
Query: 125 AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSC 184
LR D+ + +V +LLVPS+ +GC++GKGG I+ +R+ T A IR+L E LP C
Sbjct: 417 ---LR-DDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPLC 472
Query: 185 ALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSG-SLVGPTAA 243
AL +DE+VQ+ GE V + AL QI SRL N R + + S+S S G A+
Sbjct: 473 ALDNDEVVQVLGEIRVARDALVQITSRLRANLYREKTDRSDDYGYQRSTSPLSNFGLQAS 532
Query: 244 TPIVGIAPLMGP--------YGGYKG--------------DTAGDWSRSLYSAPRDDLS- 280
P AP P G Y G AGD RS +LS
Sbjct: 533 QPPGIQAPRSPPSWLLQQTERGAYNGLPRLTSYAGIERSYGLAGD--RSALPTGLTNLSV 590
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
+ ++ P V+G+ G + QI + SGA + + T D LI +S
Sbjct: 591 VTSTKIDVLIPEVTFSAVLGQNGDNLTQISKMSGAKVTLADGCTATGDRLIEISGTPDQT 650
Query: 341 DTLSATIEA 349
+ +EA
Sbjct: 651 NIAKTVVEA 659
>gi|302814720|ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
gi|300143144|gb|EFJ09837.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
Length = 630
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 167/452 (36%), Positives = 254/452 (56%), Gaps = 55/452 (12%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE----- 98
++R LCP +IGS+IG+GG I+K LR T +KI+I + +PGS+ERV+ + + E
Sbjct: 1 LFRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDE 60
Query: 99 --------------------TNAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDED---- 133
+ + +G PAQ ALFKVH R++ A++ D D
Sbjct: 61 DYPAGSGGGAPAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDS 120
Query: 134 --SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
D +V ++LVP +Q+GC++GK G+I++ +R ETG+QIRIL E LP CAL +DE+
Sbjct: 121 VEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEV 180
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
VQ+ G+ VK+AL I++RL DNP + + AS S + G A+ P +
Sbjct: 181 VQVVGDRPSVKRALNAISTRLLDNPPKDRPSSASFQSGNFGGGSRSSGFPASEPYIPQHT 240
Query: 252 LMGPYGGYKGDT---AGDWSRSLYSAPRDDLSS-----------KEFSLRLVCPVANIGG 297
+ P + + +GD L LS +E R++CP IG
Sbjct: 241 SLAPQTRLRAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGN 300
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGK I +++E+GA I V + ++ +I VS+ E +D LS EAV +Q
Sbjct: 301 IIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDDLSPAQEAVFHIQ--- 354
Query: 358 SEKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIA 415
+K+ D G S TRLLVP++ +GCL+GKGG+II+EMR T+A IR+L +E LP A
Sbjct: 355 -DKLRDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPLCA 413
Query: 416 SEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
++DE+VQ+ G++ +A+DAL+Q+ +RLRANL+
Sbjct: 414 LDNDEVVQVLGEIRVARDALVQITSRLRANLY 445
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 125/216 (57%), Gaps = 22/216 (10%)
Query: 11 RSHSQTDYADHGPNKRRYTGDDRDQFIIG------PEDTVYRYLCPIRKIGSIIGRGGEI 64
R+ ++D D+G R T +F G E+ V+R LCP KIG+IIG+
Sbjct: 249 RAEPRSDSGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIGNIIGK---F 305
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI 124
++ L+ +T +KI + + VPG EERV+ V +A E D +SPAQ+A+F + D++
Sbjct: 306 IQTLQEETGAKINVPDAVPGCEERVIIV-------SAVESPDDDLSPAQEAVFHIQDKL- 357
Query: 125 AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSC 184
D+ + +V +LLVPS+ +GC++GKGG I+ +R+ T A IR+L E LP C
Sbjct: 358 -----RDDGGETSERVVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPLC 412
Query: 185 ALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
AL +DE+VQ+ GE V + AL QI SRL N R +
Sbjct: 413 ALDNDEVVQVLGEIRVARDALVQITSRLRANLYREK 448
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 268 bits (685), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 200/564 (35%), Positives = 298/564 (52%), Gaps = 69/564 (12%)
Query: 9 GKRSHSQTDY-ADHGPNKRRYTG-DDR--DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEI 64
GKR HSQ D+ D KRR T DDR D+ I VYR LCP IGS+IG+ G++
Sbjct: 5 GKRYHSQRDHDGDRKHQKRRMTDRDDRGNDELI------VYRILCPDEVIGSVIGKNGKV 58
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKV 119
+ +R +T++K+++ + PGS++RV+T+Y E E D+F + AQDAL KV
Sbjct: 59 INSIRQETRAKVKVVDPFPGSKDRVITIYCYVKEKEDVEIDDEFAGKEPLCAAQDALLKV 118
Query: 120 HDRVIAEELR--GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL- 176
H IA + GD + + ++LVPS Q +IGK G ++ +RS+T A I++
Sbjct: 119 H-VAIANSIAAIGDSEKKRKDRDECQILVPSSQSANIIGKAGATIKKLRSKTRANIKVTA 177
Query: 177 KDEHLP--SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS---- 230
KD P SCA+ D V I+GE+ VK+AL ++S ++ R L +A+ +
Sbjct: 178 KDAADPTHSCAMEFDNFVVITGESEAVKRALFAVSSIMYKFGPREDISLDTAVPEAPPSI 237
Query: 231 --------------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+ +S +V P A I+G A + GY D W +YS+
Sbjct: 238 IIPSDVPVYPPGGLYPASDPIVTPRAVPQIIG-ATNVPDLQGY-ADAGNSWP--MYSSAL 293
Query: 277 DDLS------SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
+S S+E +R++CP IG VIGKGG+ I +RQ SGA I+VD S D+CL
Sbjct: 294 PVVSGVGASRSEELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECL 353
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
I +++ E D S +EAV+ +Q + ++ E D+ + + RLLVP+ IGC+IGK GS
Sbjct: 354 IIITTTESPSDLKSMAVEAVLLMQGKIND--EDDT---TVSIRLLVPSKVIGCIIGKSGS 408
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DR 449
II E+R+ TKA++RI K + PK A +DE+V++ G +D +DALIQ++ RLR ++ +R
Sbjct: 409 IINEIRKRTKADVRI-SKGDKPKCADANDELVEVGGSVDCVRDALIQIILRLRDDVLRER 467
Query: 450 EGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPY-------GGYGSSDLAAGDS 502
+ + + P GS GL+ S P G G L+
Sbjct: 468 DTGHNPSIGAESLYP----GSAGLSLPSMMHSVPPVAAPMVYDHRAESGAGLGMLSPSSP 523
Query: 503 YGSYGSSQLGGTGSAYGSYGSYSS 526
YG YGS +G G YGS SY++
Sbjct: 524 YGGYGSLPMGDNG--YGSMSSYAT 545
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 158/337 (46%), Gaps = 45/337 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ + R LCP KIG +IG+GG +K +R + + I + ++ +E ++ + +
Sbjct: 305 EELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITTT----- 359
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E S A +A+ + ++ DED V+ +LLVPS IGC+IGK G
Sbjct: 360 --ESPSDLKSMAVEAVLLMQGKI------NDEDD---TTVSIRLLVPSKVIGCIIGKSGS 408
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD------ 214
I+ IR T A +RI K + P CA +DELV++ G V+ AL QI RL D
Sbjct: 409 IINEIRKRTKADVRISKGDK-PKCADANDELVEVGGSVDCVRDALIQIILRLRDDVLRER 467
Query: 215 ----NPSR-SQHLLASAISNSHSSSGSLVGPTAATPI----------VGIAPLMGPYGGY 259
NPS ++ L + S S V P AA + +G+ PYGGY
Sbjct: 468 DTGHNPSIGAESLYPGSAGLSLPSMMHSVPPVAAPMVYDHRAESGAGLGMLSPSSPYGGY 527
Query: 260 KGDTAGD---WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
GD S S Y+ +L ++ P +G V+GKGGA I IR+ SGA+
Sbjct: 528 GSLPMGDNGYGSMSSYATKLYGGLPPPSTLDMLIPANAVGKVLGKGGANIANIRKISGAS 587
Query: 317 IKV-DSSSTEGDDCLI---TVSSKEFFEDTLSATIEA 349
I++ D+ S GD + T K E+ + A I A
Sbjct: 588 IEISDNKSARGDRIALISGTPEQKRAAENLIQAFIMA 624
>gi|148909250|gb|ABR17725.1| unknown [Picea sitchensis]
Length = 435
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 168/422 (39%), Positives = 252/422 (59%), Gaps = 37/422 (8%)
Query: 9 GKRSHSQTDYADHGP-NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQ 67
GKR+ ++ D A++ NKRR +G R+Q + G + TVYR LCP IGS+IG+GG+++K
Sbjct: 7 GKRTRTEHDLAENNDRNKRRNSGTGREQTMPGADSTVYRILCPSNVIGSVIGKGGKVIKS 66
Query: 68 LRIDTKSKIRIGETVPGSEERVVTVYSA------SDETNAFEDGDKFVSPAQDALFKVHD 121
+R +T+SKIR+ + VPG +ERV+ ++S+ + + ++ ++ V PAQD L +VH
Sbjct: 67 MRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDDDDDDNENEPVCPAQDGLLRVHS 126
Query: 122 RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
++ E D D+D A+LLV + QIG +IGKGG +Q +RSE+GAQI+I + + L
Sbjct: 127 VIVQESSGKDNDADKKRPQDARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRKDEL 186
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ----HLLASAISNSHSSSGSL 237
P CA DELV ISG+A+ VKKAL +++ L +P + Q +L +S SG
Sbjct: 187 PGCAFSFDELVVISGDAAAVKKALYAVSAFLFKHPPKEQIPWSVILPETNQSSLPPSGVP 246
Query: 238 VGPTA---------------ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP------- 275
P A + PI+G A + GGY + W S + P
Sbjct: 247 TFPPANYLPQGDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPALPSFSKFGN 306
Query: 276 -RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+S+EFS+R++CP IGGVIGKGG I +R ++GA+I+V+ + TE D+ +I VS
Sbjct: 307 STTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVS 366
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
+ E +D +S TIEAV+ LQ + S ++D + +TR LVP+ IGCL+GKGG+II+E
Sbjct: 367 ATELADDRVSPTIEAVLLLQGKTSGTTDKDGAI---STRFLVPSKHIGCLLGKGGNIISE 423
Query: 395 MR 396
MR
Sbjct: 424 MR 425
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 85/173 (49%), Gaps = 17/173 (9%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSAT 346
R++CP IG VIGKGG +I +RQE+ + I+V + D+ +I + S +D
Sbjct: 45 RILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDD 104
Query: 347 IEAVVRLQPRCSEK----------IERDSGLISFT-------TRLLVPTSRIGCLIGKGG 389
+ +P C + ++ SG + RLLV S+IG LIGKGG
Sbjct: 105 DDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDARLLVANSQIGSLIGKGG 164
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+ I ++R + A I+I K+ LP A DE+V ISGD K AL V L
Sbjct: 165 NNIQKLRSESGAQIQIPRKDELPGCAFSFDELVVISGDAAAVKKALYAVSAFL 217
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 14/129 (10%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ R LCP KIG +IG+GG +K +R DT + IR+ + S+ERV+ V +
Sbjct: 314 EEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVV-------S 366
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E D VSP +A+ + + G D DG ++ + LVPS IGC++GKGG
Sbjct: 367 ATELADDRVSPTIEAVLLLQGKT-----SGTTDKDGA--ISTRFLVPSKHIGCLLGKGGN 419
Query: 161 IVQNIRSET 169
I+ +R+ +
Sbjct: 420 IISEMRANS 428
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 366 GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
G S R+L P++ IG +IGKGG +I MR+ T++ IR+
Sbjct: 38 GADSTVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRV 77
>gi|225443339|ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 162/459 (35%), Positives = 258/459 (56%), Gaps = 40/459 (8%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS-------- 94
++R LCP K G +IG+GG I++Q R DT +KIRI ++V G +ERV+ + +
Sbjct: 56 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 115
Query: 95 ------------------ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD- 135
++ N D SPAQ AL +V +R++ + +E
Sbjct: 116 ASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 175
Query: 136 ---GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
G V +LL PS+Q+GCV+G+GG+IV+ IR E+GAQIR+L +H+P+CA DEL+
Sbjct: 176 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELI 235
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS-LVGPTAATPIVGI-A 250
QI+G V+KAL ++S L DNP A+A G+ + G + P G +
Sbjct: 236 QITGTFPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMPGQLDSFPQRGYGS 295
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
L GP +G ++ ++ + R L +E +L+C +G +IGKGG+II ++
Sbjct: 296 SLHGPDYHSRGYSSMPGPENIGANHRMVL-EEEVVFKLLCHFEKVGSLIGKGGSIIRFLQ 354
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF 370
E+GA+IK+ ++ + D+ ++ +S++E E S +AV+R+ R +E I + G +
Sbjct: 355 SETGASIKIADAAPDSDERVVVISARENLEQKHSPAQDAVIRVHCRIAE-IGFEPGA-AV 412
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
RLLV + +IGCL+GKGG II+EMRR T A+IRI KE +PK S++DE+VQ+ G L
Sbjct: 413 VARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQS 472
Query: 431 AKDALIQVMTRLRANLFDREGAVST-----FVPVLPYIP 464
+DAL ++ +R+R +F + ++S ++ P IP
Sbjct: 473 VQDALFRITSRIRETIFPLKPSISNVNGPPYMSSFPEIP 511
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 126/223 (56%), Gaps = 24/223 (10%)
Query: 1 MAGQRNSYGKRSHSQT----DYADHG----PNKRRYTGDDRDQFIIGPEDTVYRYLCPIR 52
M GQ +S+ +R + + DY G P + R ++ E+ V++ LC
Sbjct: 281 MPGQLDSFPQRGYGSSLHGPDYHSRGYSSMPGPENIGANHR---MVLEEEVVFKLLCHFE 337
Query: 53 KIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
K+GS+IG+GG I++ L+ +T + I+I + P S+ERVV + +A E+ ++ SPA
Sbjct: 338 KVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVVVI-------SARENLEQKHSPA 390
Query: 113 QDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
QDA+ +VH R+ + + G V A+LLV S QIGC++GKGG I+ +R TGA
Sbjct: 391 QDAVIRVHCRI------AEIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGAS 444
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
IRI E +P C ++DELVQ+ G V+ AL +I SR+ +
Sbjct: 445 IRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFRITSRIRET 487
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 87/186 (46%), Gaps = 27/186 (14%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
QV ++L P+ + G VIGKGG I++ R +TGA+IRI D+ + C + ++ I +A
Sbjct: 55 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRI--DDSVLGC---DERVILIVADA 109
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLAS-----AISNSHSSSGSLVGPTAATPIVGIAPLM 253
K+ I ++ S +L S A+ + SS A +V + +
Sbjct: 110 VKSKREASAICGAEANDGEESANLSNSSPNPVAVDDDESS-------PAQQALVRVFERI 162
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
K D + DL + RL+ P +G V+G+GG I+ +IRQES
Sbjct: 163 -----LKVDEEREEKEKKE-----DLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQES 212
Query: 314 GAAIKV 319
GA I+V
Sbjct: 213 GAQIRV 218
>gi|302142130|emb|CBI19333.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 193/534 (36%), Positives = 287/534 (53%), Gaps = 59/534 (11%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQ---FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVK 66
KRS+ ++ +G K + +G Q I P V+R LCP K GS+IG+GG I+
Sbjct: 9 KRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVIGKGGTIIS 68
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG--------DKFVSPAQDALFK 118
Q+R +T K+R+ ETV G +ERVV + + +T A + +K +S Q AL
Sbjct: 69 QIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDDSQVEKGISSVQKALLL 128
Query: 119 VHDRVI---AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
V +R+ +E GDEDS+ +LLV S Q+GC++GKGG +++ + +E+GAQIRI
Sbjct: 129 VFERMAEGESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRI 188
Query: 176 LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSG 235
L + LP CA SDELVQI+GE K+AL I+ +L +NP R +++ +N SS
Sbjct: 189 LPRDKLPLCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVS---TNPTGSSS 245
Query: 236 SLVGPT-----AATPIVGIAPLMG-PYGGYKGDTAGDWSRSL-------------YSAPR 276
L GP A P P G PY DT D+ + + P+
Sbjct: 246 HLFGPPLPRSEAQPPPNYSFPAQGAPYAAGVRDT--DYHSNTPQLHKFHESGMPGWMKPQ 303
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
D L + RL+C +GG+IGKGG II ++ E+G IKV + +D +I +S
Sbjct: 304 DIL-----TFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGS 358
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+D +S +AV+R+Q R I DS + RLLV +++IGCL+GKGG+II EMR
Sbjct: 359 AHPDDRISPAQDAVLRVQSRIVRAIP-DSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMR 417
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVS-- 454
+L+ A+IRIL K+ +PK ASE++E+VQI+G+ + ++AL+Q+ TRLR + F +V+
Sbjct: 418 KLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEALLQITTRLRHHHFRDAFSVNHP 477
Query: 455 -------TFVPVLPYIPVSENGSDGLNYESRDSKRH-----GRGPPYGGYGSSD 496
P PY+ E G+ Y + H G P+GG+ D
Sbjct: 478 SNPAFTDQVPPFPPYLARREFSPPGM-YSNLGPSFHKFDAVGVLHPHGGFHPHD 530
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 251 bits (640), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 180/538 (33%), Positives = 275/538 (51%), Gaps = 81/538 (15%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS--ASDETN 100
+YR LCP IGS+IG+ G ++ +R T +K+++ + PG+++RV+ VY + +
Sbjct: 41 VLYRILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVVDPYPGADKRVILVYCYVKHRDLD 100
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A D ++ V AQDAL +VH+ ++ R DSD + A +LVP+ Q VIGK G
Sbjct: 101 AEVDDNEPVCAAQDALLRVHNAIVDTLHRNRRDSDKKNTEEANILVPASQASNVIGKSGA 160
Query: 161 IVQNIRSETGAQIRI-LKD--EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
+++++RS + A I++ KD + SCA+ D VQI+G A VKKAL +++ ++ +PS
Sbjct: 161 VIKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYKHPS 220
Query: 218 RSQHLLASAISNS------------HSSSGSLVGPTAATPIVGIAPLMGPYGGYK----- 260
+ L ++I + +S P AA P + P + G
Sbjct: 221 KENIPLETSIPEPTPSIIIPSELPVYPASNFYSAPDAAIP--SVHPSLSILGSTHHVPEL 278
Query: 261 GDTAGDWSR-----------SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
A D R YSAP+ S E R++CP IG VIG+GGA I I
Sbjct: 279 ALPADDHGRLPIYPSILPVIPTYSAPK---CSGELEFRVLCPSGKIGLVIGRGGATIKNI 335
Query: 310 RQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS 369
RQESGA I VD + + ++ +IT++S E +D SA +EAV+ LQ + ++ E D
Sbjct: 336 RQESGARIDVDDAKNDREESIITITSTEAIDDVKSAAVEAVLLLQAKIND-YEDD----R 390
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
RLLVP IGCLIG+GGSI+ +MR+ TKANI ++ K + P+ AS DE+V++SG+ D
Sbjct: 391 MNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI-LISKGDKPRRASSSDELVEVSGEAD 449
Query: 430 LAKDALIQVMTRLRANLF---------DREGAVS------------TFVPVLPYIPVSEN 468
+DAL+Q++ RLR ++ DR+G ++ + +LP+ P
Sbjct: 450 KLRDALVQIILRLREDVLKESVESQNSDRDGKLTVATSDSLYGSSLSLPALLPHNP---- 505
Query: 469 GSDGLNYESRDSKRHGRGPPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSS 526
L+Y+ R G L SYG S + T YG SY+S
Sbjct: 506 QIAPLSYDRR------------GESERALEVFPRTSSYGYSSMQVTDDGYGGLPSYTS 551
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 159/324 (49%), Gaps = 60/324 (18%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP KIG +IGRGG +K +R ++ ++I + + EE ++T+ S T A +D
Sbjct: 312 FRVLCPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESIITITS----TEAIDD 367
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
S A +A+ + ++ D + D ++ +LLVP+ IGC+IG+GG IV +
Sbjct: 368 ---VKSAAVEAVLLLQAKI------NDYEDD---RMNLRLLVPNKVIGCLIGRGGSIVND 415
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
+R +T A I I K + P A SDELV++SGEA ++ AL QI RL ++ +L
Sbjct: 416 MRKKTKANILISKGDK-PRRASSSDELVEVSGEADKLRDALVQIILRLRED------VLK 468
Query: 225 SAISNSHS---------SSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
++ + +S +S SL G + + P ++ P + P D G+ R+L
Sbjct: 469 ESVESQNSDRDGKLTVATSDSLYGSSLSLPALLPHNPQIAPLS---YDRRGESERALEVF 525
Query: 275 PR------------DD-------LSSKEFSLRL-----VCPVANIGGVIGKGGAIINQIR 310
PR DD +SK + L P + + V+GK G ++ IR
Sbjct: 526 PRTSSYGYSSMQVTDDGYGGLPSYTSKAYEEHLPRDEMTIPASGLSKVMGKRGTNLDNIR 585
Query: 311 QESGAAIKVDSSSTEGDDCLITVS 334
+ SGA I++ S + D + +S
Sbjct: 586 KISGAHIEIIESKSSRHDHIAYIS 609
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 249 bits (635), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 185/574 (32%), Positives = 296/574 (51%), Gaps = 83/574 (14%)
Query: 9 GKRSHSQTD------YADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
GKR+ Q D D+ KRR +DRD+ G E YR LCP IGS+IG+ G
Sbjct: 5 GKRNRQQRDGDRGGRNWDNKNQKRRV--NDRDERDKG-ELIAYRILCPNEVIGSVIGKNG 61
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVY-----SASDETNAFEDGDKFVSPAQDALF 117
+++ +R ++++K+++ + PG++ RV+T++ E D +K + AQDAL
Sbjct: 62 KVINSIRQESRAKVKVVDPFPGAKHRVITIFCHVKNKEEIEIEDEFDNEKPLCAAQDALI 121
Query: 118 KVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
KVH + E GD + ++ ++LVPS Q +IGK G ++ +R +T I+++
Sbjct: 122 KVHSAISNSIETAGDSEKKRKNKDECQILVPSSQSAILIGKAGATIKQLRVKTRTNIKVV 181
Query: 177 -KDEHLP--SCALRSDELVQISGEASVVKKALCQIASRLHD-NPSRSQHLLASAISNSHS 232
KD P SCA+ D V + GE+ VK+AL +++ ++ +P L + HS
Sbjct: 182 PKDAADPEHSCAMEFDNFVLV-GESEAVKRALFAVSTIMYKFSPKEDIPLDTTVPETPHS 240
Query: 233 -----------------SSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
+S +V P + ++G + +GGY DT W LYS+P
Sbjct: 241 IIIPSELPIYPPGGLYPASDPIVQPRSFPQLIGATTMQDLHGGY-ADTGNTWP--LYSSP 297
Query: 276 RDDLSS------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
+SS +E +R++CP IG +IGKGG I ++RQ SGA I+VD S D+C
Sbjct: 298 LPVVSSLGASQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDEC 357
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
LIT+++ E D S +EAV+ LQ + +++ D +S RLLVP+ IGC+IG+ G
Sbjct: 358 LITITATESTSDLKSVAVEAVLLLQEKINDE---DDAPVSI--RLLVPSKVIGCIIGRSG 412
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+II E+R+ TKA+I+I + N PK A ++DE+V++ G++D +DALIQ++ RLR ++
Sbjct: 413 AIINEIRKRTKADIQI-SRSNKPKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKN 471
Query: 450 E----------------GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYG 493
+ +V + P+L IP + + L Y+ +R G G G +
Sbjct: 472 KDIDHNRHIGSESLYASSSVLSAPPMLSSIPAT---APALAYD----QRTGSGTGLGMHS 524
Query: 494 SSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSG 527
S DSY + YGS SY++
Sbjct: 525 SRSHYGYDSYSM--------EDNGYGSMSSYATN 550
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 160/341 (46%), Gaps = 52/341 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ + R LCP KIG +IG+GG +K++R + ++I + ++ +E ++T+
Sbjct: 310 EELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITI-------T 362
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E S A +A+ + +++ DED V+ +LLVPS IGC+IG+ G
Sbjct: 363 ATESTSDLKSVAVEAVLLLQEKI------NDEDD---APVSIRLLVPSKVIGCIIGRSGA 413
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ IR T A I+I + P A +DELV++ GE V+ AL QI RL ++ +++
Sbjct: 414 IINEIRKRTKADIQISRSNK-PKYADDNDELVEVVGEVDCVRDALIQIVLRLREDVLKNK 472
Query: 221 ---HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG--------------------PYG 257
H + ++SS L P + I AP + Y
Sbjct: 473 DIDHNRHIGSESLYASSSVLSAPPMLSSIPATAPALAYDQRTGSGTGLGMHSSRSHYGYD 532
Query: 258 GYKGDTAG-----DWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
Y + G ++ +LY R S +L +V P +G V+GKGGA + IR+
Sbjct: 533 SYSMEDNGYGSMSSYATNLYEGHRLPPLS---TLEMVVPANAVGKVMGKGGANLANIRKI 589
Query: 313 SGAAIKV-DSSSTEGDDCLI---TVSSKEFFEDTLSATIEA 349
SGA +++ +S S GD + T K E+ + A I A
Sbjct: 590 SGATVEISESKSYRGDRVALISGTSEEKRAAENLIQAFIMA 630
>gi|225458964|ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 701
Score = 246 bits (629), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 196/563 (34%), Positives = 289/563 (51%), Gaps = 88/563 (15%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQ---FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVK 66
KRS+ ++ +G K + +G Q I P V+R LCP K GS+IG+GG I+
Sbjct: 9 KRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVIGKGGTIIS 68
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA-----FEDGD--------------- 106
Q+R +T K+R+ ETV G +ERVV + + +T A EDG+
Sbjct: 69 QIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDGEDTKAAEEVSDTKEPG 128
Query: 107 -----------------KFVSPAQDALFKVHDRVI---AEELRGDEDSDGGHQVTAKLLV 146
K +S Q AL V +R+ +E GDEDS+ +LLV
Sbjct: 129 ENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLV 188
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
S Q+GC++GKGG +++ + +E+GAQIRIL + LP CA SDELVQI+GE K+AL
Sbjct: 189 LSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQ 248
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT-----AATPIVGIAPLMG-PYGGYK 260
I+ +L +NP R +++ +N SS L GP A P P G PY
Sbjct: 249 SISQQLLENPPRDYDIVS---TNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGAPYAAGV 305
Query: 261 GDTAGDWSRSL-------------YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
DT D+ + + P+D L + RL+C +GG+IGKGG II
Sbjct: 306 RDT--DYHSNTPQLHKFHESGMPGWMKPQDIL-----TFRLLCHDERVGGIIGKGGTIIK 358
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL 367
++ E+G IKV + +D +I +S +D +S +AV+R+Q R I DS
Sbjct: 359 NLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAIP-DSKE 417
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
+ RLLV +++IGCL+GKGG+II EMR+L+ A+IRIL K+ +PK ASE++E+VQI+G+
Sbjct: 418 KTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGE 477
Query: 428 LDLAKDALIQVMTRLRANLFDREGAVS---------TFVPVLPYIPVSENGSDGLNYESR 478
+ ++AL+Q+ TRLR + F +V+ P PY+ E G+ Y +
Sbjct: 478 FEAVQEALLQITTRLRHHHFRDAFSVNHPSNPAFTDQVPPFPPYLARREFSPPGM-YSNL 536
Query: 479 DSKRH-----GRGPPYGGYGSSD 496
H G P+GG+ D
Sbjct: 537 GPSFHKFDAVGVLHPHGGFHPHD 559
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 246 bits (628), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 181/538 (33%), Positives = 277/538 (51%), Gaps = 78/538 (14%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
+YR LCP IGS+IG+ G ++ +R T +K+++ + PG+++RV+ VY +
Sbjct: 41 VLYRILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVVDPYPGADKRVILVYCYVKHRDLD 100
Query: 103 EDGD--KFVSPAQDALFKVHDRVI--AEEL-RGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+GD + V AQDAL +VH+ ++ + L + +DSD A +LVP+ Q VIGK
Sbjct: 101 AEGDDNEPVCAAQDALLRVHNAIVDALQTLHKNHKDSDKKSTEEANILVPASQASNVIGK 160
Query: 158 GGQIVQNIRSETGAQIRI-LKDEHLP--SCALRSDELVQISGEASVVKKALCQIASRLHD 214
G +++++RS + A I++ KD P SCA+ D VQI+G A VKKAL +++ ++
Sbjct: 161 SGAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAVKKALFGVSTIIYK 220
Query: 215 NPSRSQHLLASAISNS------------HSSSGSLVGPTAATPIVGIAPLMGPYGGYK-- 260
+PS+ L ++I + + +S P AA P + P M G +
Sbjct: 221 HPSKENIPLETSIPDPTPSIIIPSELPVYPASNFYSAPDAAIP--SVHPSMSVLGSTRHV 278
Query: 261 ---GDTAGDWSR-----------SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAII 306
A D R YSAP+ S E R++CP IG VIG+GGA I
Sbjct: 279 PELAVPADDHGRLPIYQSILPVIPTYSAPK---CSGELEFRVLCPGGKIGLVIGRGGATI 335
Query: 307 NQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSG 366
IRQESGA I VD + + ++ +IT+ S E +D SA +EAV+ LQ + + DS
Sbjct: 336 KNIRQESGARIDVDDAKNDKEESIITIISTESTDDVKSAAVEAVLLLQAKIN-----DSE 390
Query: 367 LISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
RLLVP IGCLIG+GGSI+ +MR+ TKANI ++ K + P+ AS DE+V++SG
Sbjct: 391 DDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI-LISKGDKPRRASSSDELVEVSG 449
Query: 427 DLDLAKDALIQVMTRLRANLF---------DREGAVS---------TFVPVLPYIPVSEN 468
+ D +DAL+Q++ RLR + DR+G ++ + +P+ +P ++
Sbjct: 450 EADKLRDALVQIILRLREAVLKESVESQNSDRDGQLTVAASDSLYGSSLPLPALLPHNQQ 509
Query: 469 GSDGLNYESRDSKRHGRGPPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSS 526
+ L Y+ R G L SYG S + T YG SY+S
Sbjct: 510 IA-PLGYDRR------------GEPERALEVFPRTSSYGYSSMQVTDDGYGGLPSYAS 554
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/314 (31%), Positives = 149/314 (47%), Gaps = 70/314 (22%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP KIG +IGRGG +K +R ++ ++I + + EE ++T+ S E
Sbjct: 315 FRVLCPGGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIIST-------ES 367
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
D S A +A+ + ++ D + D ++ +LLVP+ IGC+IG+GG IV +
Sbjct: 368 TDDVKSAAVEAVLLLQAKI------NDSEDD---RMNLRLLVPNKVIGCLIGRGGSIVND 418
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---------- 214
+R +T A I I K + P A SDELV++SGEA ++ AL QI RL +
Sbjct: 419 MRKKTKANILISKGDK-PRRASSSDELVEVSGEADKLRDALVQIILRLREAVLKESVESQ 477
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIV-----GIAPLMGPYGGYKGDTAGDWSR 269
N R L +A S SL G + P + IAPL GY D G+ R
Sbjct: 478 NSDRDGQLTVAA-------SDSLYGSSLPLPALLPHNQQIAPL-----GY--DRRGEPER 523
Query: 270 SLYSAPR------------DD-------LSSKEFS-----LRLVCPVANIGGVIGKGGAI 305
+L PR DD +SK + L + P + I V+GK G
Sbjct: 524 ALEVFPRTSSYGYSSMQVTDDGYGGLPSYASKAYEEHVPRLEMTVPASGISKVMGKHGTN 583
Query: 306 INQIRQESGAAIKV 319
++ IR+ SGA I++
Sbjct: 584 LDNIRKISGAHIEI 597
>gi|449433573|ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 168/467 (35%), Positives = 255/467 (54%), Gaps = 41/467 (8%)
Query: 9 GKRSHSQTDY-ADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQ 67
GKR + Q DY D+ KRR T ++D ++ E VYR LCP IGS+IG+ G+++
Sbjct: 4 GKRPYGQRDYNGDNKGYKRRIT--EQDDWV-SDELVVYRILCPDEVIGSVIGKSGKVINS 60
Query: 68 LRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKVHDR 122
+R +T++KI++ + PG+++RV+T++ + E D+F + AQDAL KVH
Sbjct: 61 IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHAA 120
Query: 123 VIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI-LKDEH 180
+ GD D + ++L+PS Q VIGK G ++ +RS+T I+I KD
Sbjct: 121 IANALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDAT 180
Query: 181 LP--SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS-------- 230
P SCA+ D I+GE V++AL I+S ++ P R + L + ++ +
Sbjct: 181 DPIHSCAMDFDNFAVIAGEPEGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPS 240
Query: 231 ----HSSSGSLVGPTAATPIVGIAPLMGPYG-------GYKGDTAGDWSRSLYSAP---R 276
+S+ G P I P++G G+ +S SL P
Sbjct: 241 DVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGIS 300
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
S+E +R++CP NIG VIGKGG I IRQ SGA ++VD + + D+C+IT+SS
Sbjct: 301 GHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSF 360
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
E +D S +E V+ LQ EKI D G + RLL+P+ IGC+IGK GSII E+R
Sbjct: 361 ESLDDLKSMAVETVLLLQ----EKINDDEGG-TVIMRLLIPSKVIGCIIGKSGSIINEIR 415
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+ T+A+IRI + L K AS DE+V+++G + +DAL+Q++ RLR
Sbjct: 416 KSTRADIRISKGDKL-KCASSSDELVEVTGKVGCVRDALVQIVLRLR 461
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 156/337 (46%), Gaps = 46/337 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ V R LCP IG +IG+GG +K +R + +++ + +T +E ++T+ S
Sbjct: 306 EELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISS------ 359
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
FE D S A + + + +++ + D G V +LL+PS IGC+IGK G
Sbjct: 360 -FESLDDLKSMAVETVLLLQEKI---------NDDEGGTVIMRLLIPSKVIGCIIGKSGS 409
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ IR T A IRI K + L CA SDELV+++G+ V+ AL QI RL D+ + +
Sbjct: 410 IINEIRKSTRADIRISKGDKL-KCASSSDELVEVTGKVGCVRDALVQIVLRLRDDALKER 468
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG----------------------- 257
+ ++ + S S + + + ++P P G
Sbjct: 469 DVGHNSAIVTDSMYSSGSSFSMPSVLPSVSPGAPPMGYDQRAESGSGLGVLSSSGLYGSG 528
Query: 258 -GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
GD + S S L SL ++ P G VIGKGGA I IR+ SGA
Sbjct: 529 SLSMGDNGYGYMSSYSSKLYGGLPPPS-SLEMLIPANAAGKVIGKGGANIANIRKISGAL 587
Query: 317 IKV-DSSSTEGDDCLI---TVSSKEFFEDTLSATIEA 349
I++ DS S+ GD + T K E+ + A I A
Sbjct: 588 IEISDSKSSRGDRIALISGTSEQKRTAENLIQAFIMA 624
>gi|147845094|emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
Length = 709
Score = 246 bits (627), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 193/556 (34%), Positives = 283/556 (50%), Gaps = 74/556 (13%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQ---FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVK 66
KRS+ ++ +G K + +G Q I P V+R LCP K GS+IG+GG I+
Sbjct: 9 KRSYERSLTDSNGKGKWQKSGGFYSQNQSLKISPGTVVFRVLCPASKTGSVIGKGGTIIS 68
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA-----FEDGD--------------- 106
Q+R +T K+R+ ETV G +ERVV + + +T A EDG+
Sbjct: 69 QIRQETGVKVRVEETVSGCDERVVLITGSDKDTEADNEQSKEDGEDTKAAEEVSDTKEPG 128
Query: 107 -----------------KFVSPAQDALFKVHDRVI---AEELRGDEDSDGGHQVTAKLLV 146
K +S Q AL V +R+ +E GDEDS+ +LLV
Sbjct: 129 ENDEDKESVPVEDSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLV 188
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
S Q+GC++GKGG +++ + +E+GAQIRIL + LP CA SDELVQI+GE K+AL
Sbjct: 189 LSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQ 248
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT-----AATPIVGIAPLMG-PYGG-- 258
I+ +L +NP R +++ +N SS L GP A P P G PY
Sbjct: 249 SISQQLLENPPRDYDIVS---TNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGAPYAAGV 305
Query: 259 ----YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
Y +T P + RL+C +GG+IGKGG II ++ E+G
Sbjct: 306 RDTDYHSNTPQLHKFHESGMPGXMKPQDILTFRLLCHDERVGGIIGKGGTIIKNLQNETG 365
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL 374
IKV + +D +I +S +D +S +AV+R+Q R I DS + RL
Sbjct: 366 CEIKVLDGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAIP-DSKEKTVIARL 424
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
LV +++IGCL+GKGG+II EMR+L+ A+IRIL K+ +PK ASE++E+VQI+G+ + ++A
Sbjct: 425 LVSSTQIGCLLGKGGAIIAEMRKLSGAHIRILGKDQIPKCASENEEVVQINGEFEAVQEA 484
Query: 435 LIQVMTRLRANLFDREGAVS---------TFVPVLPYIPVSENGSDGLNYESRDSKRH-- 483
L+Q+ TRLR + F +V+ P PY+ E G+ Y + H
Sbjct: 485 LLQITTRLRHHHFRDAFSVNHPSNPAFTDQVPPFPPYLARREFSPPGM-YSNLGPSFHKF 543
Query: 484 ---GRGPPYGGYGSSD 496
G P+GG+ D
Sbjct: 544 DAVGVLHPHGGFHPHD 559
>gi|449525363|ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 166/467 (35%), Positives = 258/467 (55%), Gaps = 41/467 (8%)
Query: 9 GKRSHSQTDY-ADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQ 67
GKR + Q DY D+ KRR T ++D ++ E VYR LCP IGS+IG+ G+++
Sbjct: 4 GKRPYGQRDYNGDNKGYKRRIT--EQDDWV-SDELVVYRILCPDEVIGSVIGKSGKVINS 60
Query: 68 LRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKVHDR 122
+R +T++KI++ + PG+++RV+T++ + E D+F + AQDAL KVH
Sbjct: 61 IRQETRAKIKVVDPFPGAKDRVITIFCFVKDKEDVEVDDEFNDRQTLCAAQDALLKVHAA 120
Query: 123 VIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI-LKDEH 180
+ GD D + ++L+PS Q VIGK G ++ +RS+T I+I KD
Sbjct: 121 IANALASAGDLDRKQRDKEQCQILIPSSQSANVIGKAGSTIKKLRSKTRTSIKISPKDAT 180
Query: 181 LP--SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS-------- 230
P SCA+ D I+GE V++AL I+S ++ P R + L + ++ +
Sbjct: 181 DPIHSCAMDFDNFAVIAGEPEGVRRALFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPS 240
Query: 231 ----------HSSSGSLVGPTAATPIVGIAPLMGPYG-GYKGDTAGDWSRSLYSAP---R 276
+ S+ ++ P + P++G + + G+ +S SL P
Sbjct: 241 DVPLYSAGGLYPSADPILPPRSIPPMLGAQHVQDLHDYPESGNAWPLYSSSLPVVPGGIS 300
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
S+E +R++CP NIG VIGKGG I IRQ SGA ++VD + + D+C+IT+SS
Sbjct: 301 GHPPSEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSF 360
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
E +D S +E V+ LQ EKI D G + RLL+P+ IGC+IGK GSII E+R
Sbjct: 361 ESLDDLKSMAVETVLLLQ----EKINDDEGG-TVIMRLLIPSKVIGCIIGKSGSIINEIR 415
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+ T+A+IRI + L K AS DE+V+++G + +DAL+Q++ RLR
Sbjct: 416 KSTRADIRISKGDKL-KCASSSDELVEVTGKVGCVRDALVQIVLRLR 461
>gi|63115359|gb|AAY33858.1| KH domain-containing protein [Betula platyphylla]
Length = 166
Score = 244 bits (624), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 137/166 (82%), Positives = 152/166 (91%), Gaps = 2/166 (1%)
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
+G+ISFTTRLLVPTSRIGCLIGKGG+I+TEMRRLTKANIRIL KENLPK+ASEDDEMVQI
Sbjct: 1 AGVISFTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQI 60
Query: 425 SGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHG 484
SGDLD+AKDAL+QV+TRLRANLFDREGAVSTF+PVLPY+PVS +GSDG NYESRDSKRHG
Sbjct: 61 SGDLDVAKDALMQVVTRLRANLFDREGAVSTFLPVLPYLPVSADGSDGFNYESRDSKRHG 120
Query: 485 RG--PPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGR 528
RG G GSSDLAA DSYGSYG SQ+GG+GSAYG+YG + SGR
Sbjct: 121 RGHSYSSGYGGSSDLAAADSYGSYGGSQIGGSGSAYGAYGGHPSGR 166
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 51/75 (68%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +LLVP+ +IGC+IGKGG IV +R T A IRIL E+LP A DE+VQISG+ V
Sbjct: 7 TTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGDLDV 66
Query: 201 VKKALCQIASRLHDN 215
K AL Q+ +RL N
Sbjct: 67 AKDALMQVVTRLRAN 81
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L P +IG +IG+GG IV ++R TK+ IRI S+E + V S DE G
Sbjct: 9 RLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRI-----LSKENLPKVASEDDEMVQIS-G 62
Query: 106 DKFVSPAQDALFKVHDRVIAE 126
D V A+DAL +V R+ A
Sbjct: 63 DLDV--AKDALMQVVTRLRAN 81
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 7/82 (8%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST-----EGDDCLITVSSKEF 338
F+ RL+ P + IG +IGKGGAI+ ++R+ + A I++ S DD ++ +S
Sbjct: 6 FTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGD-- 63
Query: 339 FEDTLSATIEAVVRLQPRCSEK 360
+ A ++ V RL+ ++
Sbjct: 64 LDVAKDALMQVVTRLRANLFDR 85
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 162/483 (33%), Positives = 267/483 (55%), Gaps = 47/483 (9%)
Query: 9 GKRSHSQTDYADHGPNKRRYT---GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
GKRS Q DY N++R+ G D D+ + VYR LCP IGS+IG+ G+++
Sbjct: 5 GKRSRPQRDYDGDTNNQKRHKDNKGTDNDELV------VYRILCPDEVIGSVIGKSGKVI 58
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKVH 120
+R ++++++++ + PG+ RV+T+Y E + D F + PAQDAL KVH
Sbjct: 59 NSIRNESRARVKVVDPFPGAMYRVITIYCNVKEKGDADVDDDFHQADPLCPAQDALLKVH 118
Query: 121 DRVI-AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KD 178
+ A GD D + ++LVP+ Q +IGK G ++ +RS+T A I+I KD
Sbjct: 119 AAISNAVAALGDSDKRCRDKKECQILVPTSQSANIIGKAGATIKKLRSKTRANIKITAKD 178
Query: 179 EHLP--SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH----- 231
P SCA+ D + I+GE+ VKKAL +++ ++ + + L + + +
Sbjct: 179 ASDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFSPKEEIPLETTVPEAPPSIII 238
Query: 232 SSSGSLVGP----TAATPIVG---IAPLMGP-----YGGYKGDTAGDWSRSLYSAP---- 275
SS + P A PIV + P++G + GY GD W + P
Sbjct: 239 SSDVPIYQPGGFYPNADPIVSSRSVPPILGATHIPEFQGY-GDMRSSWPIYSSTVPVVPS 297
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ S E +RL+CP IG VIGKGG+ I IRQ SGA I+VD + + D+C+ITV +
Sbjct: 298 FGNTSRSELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIA 357
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
E +D S +EA++ LQ + +++ D+ ++ R LVP+ IGC+IGK G+I+ E+
Sbjct: 358 TESPDDLKSMAVEAILLLQGKINDE---DNDIVGI--RFLVPSKVIGCIIGKSGAIVNEI 412
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DREGAVS 454
R+ T A++ I + L K A +DE+V+++G++ +DAL+Q++ RLR ++ +++G ++
Sbjct: 413 RKRTNADVCISKVDKL-KCADSNDELVEVAGEVGSVRDALVQIVLRLRDDVLKEKDGGLN 471
Query: 455 TFV 457
+ V
Sbjct: 472 SSV 474
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 106/349 (30%), Positives = 158/349 (45%), Gaps = 58/349 (16%)
Query: 8 YGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQ 67
YG S Y+ P + R + II R LCP KIG +IG+GG +K
Sbjct: 278 YGDMRSSWPIYSSTVPVVPSFGNTSRSELII-------RLLCPFDKIGRVIGKGGSTIKS 330
Query: 68 LRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEE 127
+R + ++I + +T +E ++TV A E D S A +A+ + ++
Sbjct: 331 IRQVSGARIEVDDTKADRDECIITVI-------ATESPDDLKSMAVEAILLLQGKI---- 379
Query: 128 LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
DED+D V + LVPS IGC+IGK G IV IR T A + I K + L CA
Sbjct: 380 --NDEDND---IVGIRFLVPSKVIGCIIGKSGAIVNEIRKRTNADVCISKVDKL-KCADS 433
Query: 188 SDELVQISGEASVVKKALCQIASRLHDNPSRSQH--LLASAISNS-HSSSGSLVGPTAAT 244
+DELV+++GE V+ AL QI RL D+ + + L +S ++S + + P+
Sbjct: 434 NDELVEVAGEVGSVRDALVQIVLRLRDDVLKEKDGGLNSSVGTDSVYPVHAGISIPSILP 493
Query: 245 PIVGIAPL------------------------MGPYGGYKGDTAGDWSRS-LYSAPRDDL 279
+ +AP+ P G + +S S LY
Sbjct: 494 SVPPVAPMGYDQRAESGSGLGLFSSSSLYGYGSLPMGENSYGSLASYSLSKLYEG----- 548
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGD 327
+L ++ P +G VIGKGGA I IR+ SGA I++ D+ S GD
Sbjct: 549 LPPPSTLEMLVPANAVGKVIGKGGANIANIRKISGAMIEISDAKSARGD 597
>gi|357466759|ref|XP_003603664.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355492712|gb|AES73915.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 662
Score = 242 bits (617), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 171/483 (35%), Positives = 255/483 (52%), Gaps = 80/483 (16%)
Query: 23 PNKRRYTGDDRDQFIIGPEDT----VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
P +R+ +G + P D V+R LCP KIG +IG+GG I+ Q+R +T K++I
Sbjct: 14 PKRRKPSG------VFSPLDVSSSVVFRLLCPASKIGGVIGKGGSIISQIRHETGVKVKI 67
Query: 79 GETVPGSEERVVTVYSASDETNA-----FEDGDKFVSPAQD------------------- 114
E VPG EERV+T S+E +A D D+ S +D
Sbjct: 68 EEPVPGCEERVITFLKESEEGSAEQGKEVNDNDESESKVKDDEEKGNGDDNEDKDSVSVE 127
Query: 115 ---------------ALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A+ V +RV AE+ GDE G +LL+ S+Q+GC++GKGG
Sbjct: 128 DSQSEKVNSNPTIMRAVMLVFERV-AEDEGGDESKKG--YFGLRLLILSNQVGCILGKGG 184
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+++ + +E+GAQIRIL E +P+CA SDELVQI+G VV++AL + +L +N R
Sbjct: 185 SVIKRMSAESGAQIRILPKEEIPACASDSDELVQITGGVEVVRRALQSVFQQLVENSPRD 244
Query: 220 QHLLASAISNSHSSSGSLVGPTAAT---------------PIVGIAPLMGPYGGYKGDTA 264
L + ++ S S P T P+ AP++ + ++G
Sbjct: 245 HESLPTNLTGPSSHSYGQFPPNKRTFAGQGASFATGPNEIPVFHSAPMIPKF--HEGAIL 302
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G R + + RL+CP ++G +IGKGG+II ++QE+ + IKV +
Sbjct: 303 G----------RMRPPPEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIP 352
Query: 325 EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCL 384
+DC+I +S +D +S EA+ R+Q R S + DS S R++V + IGCL
Sbjct: 353 GSEDCIIIISGPAHPDDRISPVQEAIFRVQNRISRAM-LDSKEHSMLARVIVSSKHIGCL 411
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
+GKGGSII EMR L+ A+IR+L K+ PK SEDDE++Q+SG ++ DAL+Q+ TRLR
Sbjct: 412 LGKGGSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQITTRLRN 471
Query: 445 NLF 447
N F
Sbjct: 472 NFF 474
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/252 (32%), Positives = 127/252 (50%), Gaps = 42/252 (16%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDD----------------------RDQFIIG---- 39
N G SHS Y PNKR + G + I+G
Sbjct: 251 NLTGPSSHS---YGQFPPNKRTFAGQGASFATGPNEIPVFHSAPMIPKFHEGAILGRMRP 307
Query: 40 -PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
PE +R LCP +G++IG+GG I+K L+ +T S+I++ E +PGSE+ ++ + +
Sbjct: 308 PPEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIISGPAHP 367
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
D +SP Q+A+F+V +R+ L E H + A+++V S IGC++GKG
Sbjct: 368 -------DDRISPVQEAIFRVQNRISRAMLDSKE-----HSMLARVIVSSKHIGCLLGKG 415
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G I+ +R+ +GA IR+L + P C DE++Q+SG V AL QI +RL +N R
Sbjct: 416 GSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDALLQITTRLRNNFFR 475
Query: 219 SQHLLASAISNS 230
A+ SNS
Sbjct: 476 DAFPSANFPSNS 487
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 266/481 (55%), Gaps = 56/481 (11%)
Query: 9 GKRSHSQTDY-ADHGPNKRRYTGDDR---DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEI 64
GKR SQ D D+ KRR D D+ I VYR LCP IGS+IG+ G++
Sbjct: 5 GKRFRSQRDQDGDNKIQKRRVNERDEKGSDELI------VYRILCPDGVIGSVIGKSGKV 58
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKV 119
+ +R DT++KI++ + PG+++RV+T+Y E E D+F + PAQDAL KV
Sbjct: 59 INSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKV 118
Query: 120 HDRVI-AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-K 177
H ++ A + D + ++LVPS Q VIGK G ++ +RS+T A I+I K
Sbjct: 119 HAAIVNAVASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAK 178
Query: 178 DEHLPS--CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS----- 230
D PS CA+ D V I+G++ VKKAL I++ ++ R + L + + +
Sbjct: 179 DSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSII 238
Query: 231 -------------HSSSGSLVGPTAATPIVGIAPLMGPYGGYK--GDTAGDWSRSL---- 271
+ S+ S+V + P++ A + GY G T +S +L
Sbjct: 239 IPSDVPIYPAGGFYPSADSIVSARSVPPVLA-ATHVPELQGYSDMGSTWPVYSSNLPVVS 297
Query: 272 -YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
Y A R S+E +R++CP IG VIG+GG+ I +R+ SGA ++VD + + D+CL
Sbjct: 298 GYGASR----SEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECL 353
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
ITV+S E +D S +EAV+ LQ + ++ E D + RLLVP+ IGC+IGK GS
Sbjct: 354 ITVTSTESVDDLKSMAVEAVLLLQAKIND--EDDD---TVAIRLLVPSKIIGCIIGKSGS 408
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN-LFDR 449
II E+R+ T+A++RI K PK A +DE++++ G++ +DAL+Q++ RLR + L DR
Sbjct: 409 IINEIRKRTRADVRI-SKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDR 467
Query: 450 E 450
+
Sbjct: 468 D 468
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 153/339 (45%), Gaps = 51/339 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ + R LCP KIG +IGRGG +K +R + + + + +T +E ++TV S
Sbjct: 305 EELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST----- 359
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D S A +A+ + ++ DED D V +LLVPS IGC+IGK G
Sbjct: 360 --ESVDDLKSMAVEAVLLLQAKI------NDEDDD---TVAIRLLVPSKIIGCIIGKSGS 408
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ IR T A +RI K E P CA +DEL+++ GE V+ AL QI RL D+ + +
Sbjct: 409 IINEIRKRTRADVRISKSER-PKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDR 467
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDW------------- 267
N+ + + SL A + + P P D +
Sbjct: 468 D----TGHNTSAGTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQRAETGSGLGLLSSSSLY 523
Query: 268 -------------SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
S S YS+ + +V P +G V+GKGGA I IR+ SG
Sbjct: 524 GYGSLSVGENAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISG 583
Query: 315 AAIKV-DSSSTEGDDCLI---TVSSKEFFEDTLSATIEA 349
A I++ DS S+ GD + T K E+ + A I A
Sbjct: 584 AVIEISDSKSSRGDRVALISGTPEQKRTAENLIQAFIMA 622
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 241 bits (614), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 173/481 (35%), Positives = 266/481 (55%), Gaps = 56/481 (11%)
Query: 9 GKRSHSQTDY-ADHGPNKRRYTGDDR---DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEI 64
GKR SQ D D+ KRR D D+ I VYR LCP IGS+IG+ G++
Sbjct: 5 GKRFRSQRDQDGDNKIQKRRVNERDEKGSDELI------VYRILCPDGVIGSVIGKSGKV 58
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKV 119
+ +R DT++KI++ + PG+++RV+T+Y E E D+F + PAQDAL KV
Sbjct: 59 INSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVEVDDEFNDKQPLCPAQDALLKV 118
Query: 120 HDRVI-AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-K 177
H ++ A + D + ++LVPS Q VIGK G ++ +RS+T A I+I K
Sbjct: 119 HAAIVNAVASLENSDKKKKDKEECQILVPSSQSANVIGKAGATIKRLRSKTRANIKITAK 178
Query: 178 DEHLPS--CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS----- 230
D PS CA+ D V I+G++ VKKAL I++ ++ R + L + + +
Sbjct: 179 DSTDPSHSCAMEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSII 238
Query: 231 -------------HSSSGSLVGPTAATPIVGIAPLMGPYGGYK--GDTAGDWSRSL---- 271
+ S+ S+V + P++ A + GY G T +S +L
Sbjct: 239 IPSDVPIYPAGGFYPSADSIVSARSVPPVLA-ATHVPELQGYSDMGSTWPVYSSNLPVVS 297
Query: 272 -YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
Y A R S+E +R++CP IG VIG+GG+ I +R+ SGA ++VD + + D+CL
Sbjct: 298 GYGASR----SEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECL 353
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
ITV+S E +D S +EAV+ LQ + ++ E D + RLLVP+ IGC+IGK GS
Sbjct: 354 ITVTSTESVDDLKSMAVEAVLLLQAKIND--EDDD---TVAIRLLVPSKIIGCIIGKSGS 408
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN-LFDR 449
II E+R+ T+A++RI K PK A +DE++++ G++ +DAL+Q++ RLR + L DR
Sbjct: 409 IINEIRKRTRADVRI-SKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDR 467
Query: 450 E 450
+
Sbjct: 468 D 468
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLI---TVSSKEFFE 340
+ +V P +G V+GKGGA I IR+ SGA I++ DS S+ GD + T K E
Sbjct: 568 TFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRVALISGTPEQKRTAE 627
Query: 341 DTLSATIEA 349
+ + A I A
Sbjct: 628 NLIQAFIMA 636
>gi|297742912|emb|CBI35779.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 240 bits (613), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 138/293 (47%), Positives = 183/293 (62%), Gaps = 40/293 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R +CPIR IG +I +GG + Q+R ++ + I++ T + + A + + F G
Sbjct: 46 RLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILAKERLH-FPRG 104
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L+++ R+ D + G T +LLV +QIGCVIGKGGQI+Q+I
Sbjct: 105 PQ--TSHCIFLYRMCMRL------WDWNCPSG-TFTVRLLVSFNQIGCVIGKGGQIIQSI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
RSE+GAQIRILKD+HLPSC+L S+EL+QIS E S+V+K L QIASRLHDNPSRSQHL
Sbjct: 156 RSESGAQIRILKDDHLPSCSLSSNELIQISKEPSIVRKILYQIASRLHDNPSRSQHLFVY 215
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFS 285
+ +SSSGSL+G T+ PI+ D+ SSKEFS
Sbjct: 216 VVPIGYSSSGSLMGLTSGAPIM-----------------------------DEASSKEFS 246
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-TEGDDCLITVSSKE 337
L LVCP+ NIGG+IGKG IINQIRQE GA IKVDS+S E +DCL+T+S+KE
Sbjct: 247 LCLVCPIGNIGGMIGKGDVIINQIRQEFGATIKVDSTSVVEANDCLVTISAKE 299
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 115/212 (54%), Gaps = 13/212 (6%)
Query: 238 VGPTAATPIVGIAPL---MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
+ P T + + PL + + + W R + + FSLRLVCP+ N
Sbjct: 3 IHPDPNTCLFLLCPLDTHLVVHSWVQLPVLQSWMRHI---------QRIFSLRLVCPIRN 53
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSS-TEGDDCLITVSSKEFFEDTLSATIEAVVRL 353
IGGVI KGG INQIR+ESGA IKVDS+S E DDCL+T+ +KE + L
Sbjct: 54 IGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILAKERLHFPRGPQTSHCIFL 113
Query: 354 QPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPK 413
C + + +FT RLLV ++IGC+IGKGG II +R + A IRIL ++LP
Sbjct: 114 YRMCMRLWDWNCPSGTFTVRLLVSFNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPS 173
Query: 414 IASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
+ +E++QIS + + + L Q+ +RL N
Sbjct: 174 CSLSSNELIQISKEPSIVRKILYQIASRLHDN 205
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 125/333 (37%), Gaps = 102/333 (30%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
+ +L+ P IG VI KGG + IR E+GA I++ D S A D LV I +
Sbjct: 44 SLRLVCPIRNIGGVIRKGGVFINQIRRESGAIIKV--DS--TSAAEADDCLVTILAK--- 96
Query: 201 VKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK 260
RLH P GP + I M +
Sbjct: 97 ---------ERLH-FPR---------------------GPQTSHCIFLYRMCMRLW---- 121
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
DW + S F++RL+ IG VIGKGG II IR ESGA I++
Sbjct: 122 -----DW----------NCPSGTFTVRLLVSFNQIGCVIGKGGQIIQSIRSESGAQIRI- 165
Query: 321 SSSTEGDDCL--ITVSSKEFFEDTLSATI--EAVVRLQPRCSEKIERDSGLI-------- 368
DD L ++SS E + + +I + + ++ R + R L
Sbjct: 166 ----LKDDHLPSCSLSSNELIQISKEPSIVRKILYQIASRLHDNPSRSQHLFVYVVPIGY 221
Query: 369 ----------------------SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
F+ L+ P IG +IGKG II ++R+ A I++
Sbjct: 222 SSSGSLMGLTSGAPIMDEASSKEFSLCLVCPIGNIGGMIGKGDVIINQIRQEFGATIKV- 280
Query: 407 PKENLPKIASEDDEMVQISGD--LDLAKDALIQ 437
+ + +D +V IS L L K L++
Sbjct: 281 ---DSTSVVEANDCLVTISAKERLHLFKVNLLE 310
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 238 bits (608), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 186/543 (34%), Positives = 284/543 (52%), Gaps = 69/543 (12%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV 90
D++D ++ VYR LCP +GS+IG+ G+++ +R +T+++I++ + PG ERV+
Sbjct: 36 DNKDDLVV-----VYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVI 90
Query: 91 TVYSASDETNAFEDGDKF-------VSPAQDALFKVHDRVIAEELRGDEDS--DGGHQVT 141
T++ + E D + + AQDAL KVHD ++A E++ D
Sbjct: 91 TIFCSVTEKKDIIDIEHSELNYSIPLCSAQDALLKVHDAIVASLATAAENTKIDRDDIRE 150
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPS--CALRSDELVQISGEA 198
+LLVPS Q VIGK G I++ IRS T A ++++ KD PS CA+ D +V ISGE+
Sbjct: 151 CRLLVPSSQCSNVIGKSGSIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIVLISGES 210
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT--AATPIVGIAPLMGPY 256
VKKAL +++ ++ R Q L + + S++ P+ + P G+ P P
Sbjct: 211 ESVKKALFAVSAIMYKVSPREQIPLDTTV---QEVPASIIIPSDLSIYPQGGLYPNQDPI 267
Query: 257 ---------------GGYKGDTAGDWSRSLYSAPRDDL--------SSKEFSLRLVCPVA 293
GY G++A + ++SA + S++ ++++C +
Sbjct: 268 FQHGANVSSFIGTLPQGY-GESAAN-PMPVFSASALPVVHGFGGSSKSEKLVIKVICSSS 325
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
IG VIGKGG+ I IRQ SG+ I+V DS + DDC+ITV++ E +D S +EAV+
Sbjct: 326 KIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESPDDLKSMAVEAVLL 385
Query: 353 LQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
LQ + +++ E + +LLVP+ IGC+IGK GSII+E+R+ TKANI I N P
Sbjct: 386 LQEKINDEDEEKVKM-----QLLVPSKVIGCIIGKSGSIISEIRKRTKANIHISKGNNKP 440
Query: 413 KIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DREGAVSTFVPVLPYIPVSENGSD 471
K A +DE+V+ISG++ +DALIQ++ RLR ++ DRE P SEN
Sbjct: 441 KCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDREIGSRNQPPAR-----SENN-- 493
Query: 472 GLNYESRDSKRHGRGPPYGGYGSSDLAAG---DSYGSYGS--SQLGGTGSAYGSYGSYSS 526
N+ S S G P S A D GS S L +G YG YGS+
Sbjct: 494 --NFFSSGSSNTGLALPSSFMSSVPQVASVDFDRRPETGSSMSMLPSSGGLYG-YGSFPV 550
Query: 527 GRS 529
G +
Sbjct: 551 GNN 553
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/318 (31%), Positives = 155/318 (48%), Gaps = 47/318 (14%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E V + +C KIG +IG+GG +K +R + S I + ++ ++ V +A+
Sbjct: 314 EKLVIKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTAT---- 369
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D S A +A+ + +++ DED + +V +LLVPS IGC+IGK G
Sbjct: 370 --ESPDDLKSMAVEAVLLLQEKI------NDEDEE---KVKMQLLVPSKVIGCIIGKSGS 418
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ IR T A I I K + P CA +DELV+ISGE S V+ AL QI RL D+ R +
Sbjct: 419 IISEIRKRTKANIHISKGNNKPKCADPNDELVEISGEVSDVRDALIQIVLRLRDDVLRDR 478
Query: 221 HL------LASAISNSHSSSGS----LVGPT---AATPIVG---------------IAPL 252
+ A + +N+ SSGS L P+ ++ P V + P
Sbjct: 479 EIGSRNQPPARSENNNFFSSGSSNTGLALPSSFMSSVPQVASVDFDRRPETGSSMSMLPS 538
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLS---SKEFSLRLVCPVANIGGVIGKGGAIINQI 309
G GY G+ S S+ +L + ++ + P +G V+G+GG ++ I
Sbjct: 539 SGGLYGYGSFPVGNNSYGSKSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDNI 598
Query: 310 RQESGAAIKV-DSSSTEG 326
R+ SGA I++ DS ++ G
Sbjct: 599 RRISGAMIEISDSKNSHG 616
>gi|449436912|ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449522219|ref|XP_004168125.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 693
Score = 238 bits (606), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 178/516 (34%), Positives = 267/516 (51%), Gaps = 62/516 (12%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQ----FIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
KRS ++ +G K + + R + F + P V+R L P+ +I S++GR G+ +
Sbjct: 9 KRSRDRSSVKSNGKGKWQKSSGSRSRRNQSFKLSPGYAVFRVLFPVSRIDSLVGRDGDGL 68
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDET------NAFEDG-------------- 105
++R +T +IR+ +T+PG +ER+ + ++ ET + ED
Sbjct: 69 SKIREETGVEIRVEDTIPGCDERIAVIGGSNQETEVNPEKKSKEDNKNSEVEENDGDIAK 128
Query: 106 -----DKFVSPAQDA-------------LFKVHDRVIAEELRGD-EDSDGGHQVT--AKL 144
DK P +DA LF V +++ EE D D +G T +L
Sbjct: 129 LKKKEDKDSPPVEDAKQKEVTHSQLRKALFLVSEKIFDEEPEADGTDVEGDKLPTFILRL 188
Query: 145 LVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
LV S Q+GC++GKGG +V+ + S++GAQIRIL + LP + ELVQISG VVKKA
Sbjct: 189 LVLSSQVGCLLGKGGSVVKQMSSDSGAQIRILPRDKLPPFVATNVELVQISGGIDVVKKA 248
Query: 205 LCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG--IAPLMGPYG----- 257
L + +L +NP + +AS+ + S S A G GPY
Sbjct: 249 LELVFQQLIENPPNDKDPVASSNAAQSSRSSGQSLSRAHESPRGSSFNTHGGPYSVPRDV 308
Query: 258 GYKGDTAGDWSRSLYSAP---RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
G +A + Y A R S + S RL+CP +G VIGKGGAI+ ++Q++G
Sbjct: 309 GNFHSSAPSLAPKQYEACIPGRSKPSHEILSYRLLCPTERVGNVIGKGGAIVKTLQQDTG 368
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL 374
IKV + + +D +I V+ +D +S +AV R+Q R K DS + R
Sbjct: 369 CDIKVVDGALDSEDRIILVAGPAHPDDRISPVQDAVFRVQARIV-KAAADSKEQNLVARF 427
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
LV +++IGCL+GKGGSII EMR+ T A IRIL KE +PK A ED+E+VQI+G+ + +DA
Sbjct: 428 LVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQIPKCAGEDEEVVQINGEPETVQDA 487
Query: 435 LIQVMTRLRANLF-DREGAVST-----FVPVLPYIP 464
+ Q+ TRLR + F D +V++ F+ LP P
Sbjct: 488 MFQITTRLRHHFFRDAFPSVNSHSNPAFIDRLPSFP 523
>gi|357145086|ref|XP_003573519.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 632
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 170/479 (35%), Positives = 255/479 (53%), Gaps = 53/479 (11%)
Query: 9 GKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQL 68
GKR+ D+ G +++R + E VYR LCP + IGS+IG+ G+++ +
Sbjct: 5 GKRTSQHRDHDREGRDEKRRPAVHTQENSSNDELVVYRILCPDKVIGSVIGKNGKVINSI 64
Query: 69 RIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF--------VSPAQDALFKVH 120
R T +K+++ + PG+++RV+ VY + V AQ+AL KVH
Sbjct: 65 RQQTNAKVKVVDPYPGADKRVILVYCHVHHRDLTHRDIDVDDDDDREPVCAAQNALLKVH 124
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KD- 178
D I E L + DSD A +LVP+ Q VIGK G +++ +RS + + I++ KD
Sbjct: 125 D-AIVEALAINSDSDDEE---ANILVPASQAASVIGKSGSVIKRLRSISKSSIKVRPKDP 180
Query: 179 -EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS--------QHLLASAI-- 227
E SCA+ D VQI+G+A VKKAL +++ ++ +PS+ Q L S I
Sbjct: 181 SEVTHSCAMSFDNFVQITGDARAVKKALFAVSAIIYKSPSKEIIPLETSVQELPPSIIIP 240
Query: 228 --------SNSHS-SSGSLVGPTAATPIVGIAPLMG--PYGGYKGDTAGDW--------S 268
SN +S S G++ + PI+G + P D G +
Sbjct: 241 SELPVYPASNFYSLSDGAMPSGHPSLPILGAPHHVSRIPEFTVPADAHGRLPIYQSMVPA 300
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
YS P+ S + LR+VCP IG VIGKGG I IR+ESGA I VD + + ++
Sbjct: 301 IPTYSTPK---GSGDLLLRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREE 357
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKG 388
+ITV+S E +D SA +EAV+ LQ + ++ IE RLLVP + IGCLIGKG
Sbjct: 358 SIITVTSTEATDDVKSAAVEAVLLLQAKINDGIED-----RMHIRLLVPGNVIGCLIGKG 412
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
GSI+ +MR +KA I I K + P+ AS DE+V++ G++D +DAL+Q++ RLR ++
Sbjct: 413 GSIVNDMRNKSKAIIHI-SKGSKPRRASSSDELVEVFGEVDKLRDALVQIVLRLREDVL 470
>gi|224067136|ref|XP_002302373.1| predicted protein [Populus trichocarpa]
gi|222844099|gb|EEE81646.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 159/485 (32%), Positives = 250/485 (51%), Gaps = 55/485 (11%)
Query: 10 KRSHSQTDYADHGPNKRRYTG---DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVK 66
KR H +G KR+ T P V+R LCP KIG++ G GG ++
Sbjct: 9 KRLHDSKSTETNGKGKRQNTAGTNSPNQPLKSSPAAVVFRILCPAPKIGTVTGEGGAVIS 68
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSASDET---------------NAFEDGD----- 106
Q+R +T +K+ + E +PG +E+++ + + ++T N E+ D
Sbjct: 69 QIRQETGAKVIVEENIPGCDEQIIVITGSDEKTEVSIEQSKKDGDEEANVAEESDNKNDG 128
Query: 107 ------------------KFVSPAQDALFKVHDRVIAEELR---GDEDSDGGHQVTAKLL 145
K S Q AL V ++ + GDE+++ +LL
Sbjct: 129 NEKEEEKEGVPVEDSGTVKETSSMQKALLLVSGKMFEADPVTDGGDEENNKPSTFILRLL 188
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
V S Q+GC++GKGG +++ + +E+GAQIRI + LP C+ SDELV+I+GE V+KAL
Sbjct: 189 VLSSQVGCLLGKGGSVIKQMSAESGAQIRISPRDRLPICSSVSDELVEITGEIDAVRKAL 248
Query: 206 CQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAG 265
++ +L +NP R + S + S S P A L +G
Sbjct: 249 QSVSKQLLENPPRDHDSFPANPSGTSSHSSGHSHPRPE------AYLQRHSFSGRGKPYA 302
Query: 266 DWSRSLY-SAPRDDLSSKE--FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
SR + S +D + + RL+C +GGVIGKGG II ++QE+G IKV
Sbjct: 303 VRSRDRHESVIQDQMKPVPDVLTFRLLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEG 362
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIG 382
++ +D +I +S +D +SA +AV+R+Q R + I I RLLV +++IG
Sbjct: 363 VSDSEDRVIVISGLAHPDDRISAPQDAVIRVQTRIAMAISNKEKAI--IARLLVSSNQIG 420
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
CL+GKGG+I++EMR+ + A IRIL K+ +P ASE + +VQI+G+ ++ K+AL+Q+ TRL
Sbjct: 421 CLLGKGGAIMSEMRKSSGAYIRILGKDQIPNCASESEGVVQINGEFEVVKEALLQITTRL 480
Query: 443 RANLF 447
R + F
Sbjct: 481 RHHFF 485
Score = 45.8 bits (107), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 51/90 (56%), Gaps = 11/90 (12%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG--- 426
T RLL R+G +IGKGG+II +++ T +I+++ ++ +D ++ ISG
Sbjct: 324 LTFRLLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEG-----VSDSEDRVIVISGLAH 378
Query: 427 ---DLDLAKDALIQVMTRLRANLFDREGAV 453
+ +DA+I+V TR+ + ++E A+
Sbjct: 379 PDDRISAPQDAVIRVQTRIAMAISNKEKAI 408
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 166/482 (34%), Positives = 261/482 (54%), Gaps = 54/482 (11%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N GKR+ D+ +++R ++ + E VYR LCP + IGS+IG+GG+++
Sbjct: 2 NPSGKRTGQHRDHDREDRDQKRRPAHTQETSGMA-ELVVYRILCPDKVIGSVIGKGGKVI 60
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYS--------ASDETNAFEDGDKFVSPAQDALF 117
+R T +K+++ + PG+++RV+ VY SD +D + V AQ+AL
Sbjct: 61 NSIRQQTNAKVKVVDPYPGADKRVILVYCYVKHRDVMLSDINADDDDDREPVCAAQNALL 120
Query: 118 KVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL- 176
KVHD ++ L +DSD A +LVP+ Q VIGK G +++ +RS + + I++
Sbjct: 121 KVHDAIVGA-LAVTDDSDDKE---ANILVPASQAASVIGKSGSVIKKLRSVSKSFIKVKP 176
Query: 177 KD--EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAI------- 227
KD + SCA+ D VQI+G+A VKKAL +++ ++ PS+ L ++I
Sbjct: 177 KDPSDVTHSCAMSFDNFVQITGDARAVKKALFAVSTIMYKCPSKENIPLETSIDELPPTI 236
Query: 228 -----------------SNSHSSSG----SLVGPTA-ATPIVGIAPLMGPYGGYKGDTAG 265
S++ SG S++G T+ + + + +GG +
Sbjct: 237 ILPSELPVYPASSLYSVSDASMPSGHPSLSILGATSRGSHVPDFTVPIDTHGGLPIYQSM 296
Query: 266 DWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
+ Y+ P+ S E LR+VCP IG VIGK G I IR+ESGA + VD + +
Sbjct: 297 VPAVPTYNTPK---CSGELLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKND 353
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
++ +ITVSS E +D SA +EAV+ LQ + +++ E L RLLVP + IGCLI
Sbjct: 354 KEESIITVSSTEATDDVKSAAVEAVLLLQAKINDETEDRMHL-----RLLVPGNVIGCLI 408
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
GKGGSII +MR +KA I I K P+ AS DE+V++ G++D +DAL+Q++ RLR +
Sbjct: 409 GKGGSIINDMRNKSKAIIHI-SKGTKPRKASSSDELVEVFGEVDKLRDALVQIVLRLRED 467
Query: 446 LF 447
+
Sbjct: 468 VL 469
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 150/319 (47%), Gaps = 55/319 (17%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
+ + R +CP KIG +IG+ G +K +R ++ +++ + + EE ++TV S
Sbjct: 311 ELLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESIITVSST------ 364
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E D S A +A+ + ++ DE D H +LLVP + IGC+IGKGG I
Sbjct: 365 -EATDDVKSAAVEAVLLLQAKI------NDETEDRMH---LRLLVPGNVIGCLIGKGGSI 414
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
+ ++R+++ A I I K P A SDELV++ GE ++ AL QI RL ++
Sbjct: 415 INDMRNKSKAIIHISKGTK-PRKASSSDELVEVFGEVDKLRDALVQIVLRLRED------ 467
Query: 222 LLASAISNSHS-SSGSLVGPT------AATPIVGIAPLMGPYGGYKGDTAGDWSR----- 269
+L ++ +S G L T ++ P+ + P + D G+ R
Sbjct: 468 VLKDSVGRQNSGKDGKLTVATTEPVSSSSFPMPALLPYSQQITPLRHDQRGEVERGSNVF 527
Query: 270 ---SLYS--APRDDL----------SSKEF-----SLRLVCPVANIGGVIGKGGAIINQI 309
SLY +PR+ + +SK + + + P + + V+GK G ++ I
Sbjct: 528 PRSSLYHGYSPREAVDDGFGVRSSYTSKPYGRRVPDMEMFIPSSGLSKVMGKHGTNLDNI 587
Query: 310 RQESGAAIKVDSSSTEGDD 328
R+ SGA I++ S + D
Sbjct: 588 RKISGADIEILESKSSRHD 606
>gi|449516663|ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 643
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 177/523 (33%), Positives = 268/523 (51%), Gaps = 42/523 (8%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA 95
II P +R LC +IG +IG+ G ++KQL+ T KIR+ E S +RVVTV +
Sbjct: 51 LIIPPGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGS 110
Query: 96 SD-------ETNAFEDGDKF-VSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLL 145
E N+ G++ S AQ+ L KV +R+ +A E+ G E V +LL
Sbjct: 111 PALTSRVFLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLL 170
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
Q+G VIGKGG++V+ IR E+G +IR+L D+ LP+CA SDE+++I G+ +KKAL
Sbjct: 171 ADVAQVGSVIGKGGKVVEKIRKESGCRIRVLTDK-LPACAGPSDEMIEIEGDVWAIKKAL 229
Query: 206 CQIASRLHDNPSRSQHLLASAISNSHSSSGSL-----VGPTAATPIVGIAPLMGPYGGYK 260
++ RL D P + + A + H + L + + PI+ + + G +
Sbjct: 230 LAVSRRLQDCPPSEKRTVRPAEAVIHETLPDLHMDHILQRNSVLPILPSSSNIFASGIHS 289
Query: 261 GDTAGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D P D +++ ++ +++C IGGVIGKGG I+ ++ ESGA + V
Sbjct: 290 LSIDAD-----MLPPVDTNVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSV 344
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR----CSEKIERDSGLIS-FTTRL 374
S T D+ LI++++ E E S +AVV + R EK + S S RL
Sbjct: 345 GPSVTGCDERLISITASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARL 404
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+VP++++GC++GKGG II+E+R++T NIRI+ + +P A+E DE+VQISG+ +DA
Sbjct: 405 VVPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDA 464
Query: 435 LIQVMTRLRANLFDRE-GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYG 493
L V RLR NLF G V P++ PV + + + + S
Sbjct: 465 LYNVTGRLRDNLFLVPYGRVRDTAPLVRSTPVGTSHGSFMQHSTAQS------------- 511
Query: 494 SSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRSGSGLSSH 536
S DL S S S L S G S + +G GL SH
Sbjct: 512 SDDLGLSHSLDSPSSPGLWPPQSLSG-ISSRAISDAGRGLPSH 553
>gi|449438568|ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 156/433 (36%), Positives = 239/433 (55%), Gaps = 27/433 (6%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA 95
II P +R LC +IG +IG+ G ++KQL+ T KIR+ E S +RVVTV +
Sbjct: 46 LIIPPGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGS 105
Query: 96 SD-------ETNAFEDGDKF-VSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLL 145
E N+ G++ S AQ+ L KV +R+ +A E+ G E V +LL
Sbjct: 106 PALTSRVFLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVYCRLL 165
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
Q+G VIGKGG++V+ IR E+G +IR+L D+ LP+CA SDE+++I G+ +KKAL
Sbjct: 166 ADVAQVGSVIGKGGKVVEKIRKESGCRIRVLTDK-LPACAGPSDEMIEIEGDVWAIKKAL 224
Query: 206 CQIASRLHDNPSRSQHLLASAISNSHSSSGSL-----VGPTAATPIVGIAPLMGPYGGYK 260
++ RL D P + + A + H + L + + PI+ + + G +
Sbjct: 225 LAVSRRLQDCPPSEKRTVRPAEAVIHETLPDLHMDHILQRNSVLPILPSSSNIFASGIHS 284
Query: 261 GDTAGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D P D +++ ++ +++C IGGVIGKGG I+ ++ ESGA + V
Sbjct: 285 LSIDAD-----MLPPVDTNVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSV 339
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR----CSEKIERDSGLIS-FTTRL 374
S T D+ LI++++ E E S +AVV + R EK + S S RL
Sbjct: 340 GPSVTGCDERLISITASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARL 399
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+VP++++GC++GKGG II+E+R++T NIRI+ + +P A+E DE+VQISG+ +DA
Sbjct: 400 VVPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDA 459
Query: 435 LIQVMTRLRANLF 447
L V RLR NLF
Sbjct: 460 LYNVTGRLRDNLF 472
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/228 (38%), Positives = 133/228 (58%), Gaps = 24/228 (10%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+ +D V++ LC +IG +IG+GG IV+ L+ ++ + + +G +V G +ER++++
Sbjct: 299 VAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISI----- 353
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEEL-RGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
A E+ + SPAQ A+ V R + + + E S G V A+L+VPS+Q+GCV+G
Sbjct: 354 --TASENIESRYSPAQKAVVLVFSRSVDVAIEKWQESSSKGSPVVARLVVPSNQVGCVLG 411
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG I+ IR TG IRI+ + +P+CA SDE+VQISGE S V+ AL + RL DN
Sbjct: 412 KGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALYNVTGRLRDN- 470
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA 264
L +S +SNS + +G G T+ + P PYG + DTA
Sbjct: 471 -----LFSSVLSNSGTRNG---GGTS------VYPETSPYGRVR-DTA 503
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 159/458 (34%), Positives = 253/458 (55%), Gaps = 52/458 (11%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV 90
D++D ++ VYR LCP +GS+IG+ G+++ +R +T+++I++ + PG ERV+
Sbjct: 37 DNKDDLVV-----VYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVI 91
Query: 91 TVYSASDETNAFEDGD----KFVSP---AQDALFKVHDRVIAEELRGDEDS--DGGHQVT 141
T++ + E D + + P AQ AL KVHD ++A E++ D
Sbjct: 92 TIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRE 151
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPS--CALRSDELVQISGEA 198
+LLVPS Q VIGK G I++NIR T A ++++ KD PS CA+ D +V ISGE
Sbjct: 152 CRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMDFDNIVMISGET 211
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT--AATPIVGIAP----- 251
VKKAL +++ ++ R Q L + + S++ P+ + P G+ P
Sbjct: 212 ESVKKALFAVSAIMYKVSPREQIPLDTTV---QEVPASIIIPSDLSIYPQAGLYPSQDSI 268
Query: 252 ---------LMGPYGGYKGDTAGDWSRSLYSAPRDDL--------SSKEFSLRLVCPVAN 294
+G G+ A + ++SA + S++ +++++C +
Sbjct: 269 FQHGANVSSFIGTLPQGYGENAAN-PLPVFSASALPVVHGFGGSSRSEKLAIKVICASSK 327
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL 353
IG VIGKGG I IRQ SG+ I+V DS + DDC+ITV++ E +D S +EAV+ L
Sbjct: 328 IGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMAVEAVLLL 387
Query: 354 QPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPK 413
Q + +++ E + +LLV + IGC+IGK GSII+E+R+ TKA+I I N PK
Sbjct: 388 QEKINDEDEDKVKM-----QLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPK 442
Query: 414 IASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DRE 450
A +DE+V+ISG++ +DALIQ++ RLR ++ DRE
Sbjct: 443 SADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRE 480
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 148/319 (46%), Gaps = 49/319 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E + +C KIG +IG+GG +K +R + S I + ++ ++ V +A+
Sbjct: 315 EKLAIKVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTAT---- 370
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D S A +A+ + +++ DED D +V +LLV S IGC+IGK G
Sbjct: 371 --ESPDDLKSMAVEAVLLLQEKI------NDEDED---KVKMQLLVSSKVIGCIIGKSGS 419
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN----- 215
I+ IR T A I I K + P A +DELV+ISGE S V+ AL QI RL D+
Sbjct: 420 IISEIRKRTKADIHISKGNNTPKSADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDR 479
Query: 216 --------PSRSQHLLAS---------AISNSHSSSGSLVG-------PTAATPIVGIAP 251
P+RS++ A+ S SS V P + + + P
Sbjct: 480 ETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFDRRPETGSSM-SMLP 538
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLS---SKEFSLRLVCPVANIGGVIGKGGAIINQ 308
G GY G+ S S+ +L + ++ + P +G V+G+GG ++
Sbjct: 539 SSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDN 598
Query: 309 IRQESGAAIKV-DSSSTEG 326
IR+ SGA I++ DS ++ G
Sbjct: 599 IRRISGAMIEISDSKNSHG 617
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 159/458 (34%), Positives = 253/458 (55%), Gaps = 52/458 (11%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV 90
D++D ++ VYR LCP +GS+IG+ G+++ +R +T+++I++ + PG ERV+
Sbjct: 37 DNKDDLVV-----VYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVI 91
Query: 91 TVYSASDETNAFEDGD----KFVSP---AQDALFKVHDRVIAEELRGDEDS--DGGHQVT 141
T++ + E D + + P AQ AL KVHD ++A E++ D
Sbjct: 92 TIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRE 151
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPS--CALRSDELVQISGEA 198
+LLVPS Q VIGK G I++NIR T A ++++ KD PS CA+ D +V ISGE
Sbjct: 152 CRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGET 211
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT--AATPIVGIAP----- 251
VKKAL +++ ++ R Q L + + S++ P+ + P G+ P
Sbjct: 212 ESVKKALFAVSAIMYKVSPREQIPLDTTV---QEVPASIIIPSDLSIYPQAGLYPSQDSI 268
Query: 252 ---------LMGPYGGYKGDTAGDWSRSLYSAPRDDL--------SSKEFSLRLVCPVAN 294
+G G+ A + ++SA + S++ +++++C +
Sbjct: 269 FQHGANVSSFIGTLPQGYGENAANPV-PVFSASALPVVHGFGGSSRSEKLAIKVICSSSK 327
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL 353
IG VIGKGG I IRQ SG+ I+V DS + DDC+ITV++ E +D S +EAV+ L
Sbjct: 328 IGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMAVEAVLLL 387
Query: 354 QPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPK 413
Q + +++ E + +LLV + IGC+IGK GSII+E+R+ TKA+I I N PK
Sbjct: 388 QEKINDEDEDKVKM-----QLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPK 442
Query: 414 IASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DRE 450
A +DE+V+ISG++ +DALIQ++ RLR ++ DRE
Sbjct: 443 CADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRE 480
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 96/319 (30%), Positives = 149/319 (46%), Gaps = 49/319 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E + +C KIG +IG+GG +K +R + S I + ++ ++ V +A+
Sbjct: 315 EKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTAT---- 370
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D S A +A+ + +++ DED D +V +LLV S IGC+IGK G
Sbjct: 371 --ESPDDLKSMAVEAVLLLQEKI------NDEDED---KVKMQLLVSSKVIGCIIGKSGS 419
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN----- 215
I+ IR T A I I K + P CA +DELV+ISGE S V+ AL QI RL D+
Sbjct: 420 IISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDR 479
Query: 216 --------PSRSQHLLAS---------AISNSHSSSGSLVG-------PTAATPIVGIAP 251
P+RS++ A+ S SS V P + + + P
Sbjct: 480 ETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQVASVDFNRRPETGSSM-SMLP 538
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLS---SKEFSLRLVCPVANIGGVIGKGGAIINQ 308
G GY G+ S S+ +L + ++ + P +G V+G+GG ++
Sbjct: 539 SSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVRIPANAVGKVMGRGGGNLDN 598
Query: 309 IRQESGAAIKV-DSSSTEG 326
IR+ SGA I++ DS ++ G
Sbjct: 599 IRRISGAMIEISDSKNSHG 617
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 159/458 (34%), Positives = 253/458 (55%), Gaps = 52/458 (11%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV 90
D++D ++ VYR LCP +GS+IG+ G+++ +R +T+++I++ + PG ERV+
Sbjct: 37 DNKDDLVV-----VYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVI 91
Query: 91 TVYSASDETNAFEDGD----KFVSP---AQDALFKVHDRVIAEELRGDEDS--DGGHQVT 141
T++ + E D + + P AQ AL KVHD ++A E++ D
Sbjct: 92 TIFCSVSEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAENTKIDRDDFRE 151
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPS--CALRSDELVQISGEA 198
+LLVPS Q VIGK G I++NIR T A ++++ KD PS CA+ D +V ISGE
Sbjct: 152 CRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMDFDNIVMISGET 211
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT--AATPIVGIAP----- 251
VKKAL +++ ++ R Q L + + S++ P+ + P G+ P
Sbjct: 212 ESVKKALFAVSAIMYKVSPREQIPLDTTV---QEVPASIIIPSDLSIYPQAGLYPSQDSI 268
Query: 252 ---------LMGPYGGYKGDTAGDWSRSLYSAPRDDL--------SSKEFSLRLVCPVAN 294
+G G+ A + ++SA + S++ +++++C +
Sbjct: 269 FQHGANVSSFIGTLPQGYGENAAN-PVPVFSASALPVVHGFGGSSRSEKLAIKVICSSSK 327
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL 353
IG VIGKGG I IRQ SG+ I+V DS + DDC+ITV++ E +D S +EAV+ L
Sbjct: 328 IGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDLKSMAVEAVLLL 387
Query: 354 QPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPK 413
Q + +++ E + +LLV + IGC+IGK GSII+E+R+ TKA+I I N PK
Sbjct: 388 QEKINDEDEDKVKM-----QLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPK 442
Query: 414 IASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DRE 450
A +DE+V+ISG++ +DALIQ++ RLR ++ DRE
Sbjct: 443 CADPNDELVEISGEVSNVRDALIQIVLRLRDDVLRDRE 480
>gi|449456987|ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449517605|ref|XP_004165836.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 666
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 153/445 (34%), Positives = 237/445 (53%), Gaps = 50/445 (11%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E VPG EER++ + SD
Sbjct: 60 TTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIEI---SDTRRRD 116
Query: 103 EDGD-KFVSPAQDALFKVHDRVIAEELR--------GDEDSDGGH-------------QV 140
+G SPAQ+ALF +H+R++ E+ G ED + + +V
Sbjct: 117 PEGRMPSFSPAQEALFLIHERILESEMSPGFNGMGYGPEDEEDDYGGVRGGGGGGCGGRV 176
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEAS 199
+L+V +GC++GKGG+I++ +R ET QIRIL +D +LP C S+E+VQI G+ +
Sbjct: 177 ATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEEIVQIVGDTN 236
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP--------TAATPIVG--I 249
VKKA+ ++SRL + SQH S S + P P+ G
Sbjct: 237 AVKKAIAIVSSRLRE----SQHRDRSHFHGRLHSPERIFPPEDDYVPHNARRLPMDGRPF 292
Query: 250 APLMGPYGGYKGDTAGDWSRSLY---SAPRDD----LSSKEFSLRLVCPVANIGGVIGKG 302
P M D + S + +AP +D ++ +++CP+ + VIG+
Sbjct: 293 RPRMSASNTRGNDYSSRQSNFMVEPGAAPVNDNMMPFYGEDLVFKILCPIEKVDSVIGES 352
Query: 303 GAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIE 362
II +R + G IKV T ++ ++ +SS E +D L EA++ +Q R + +
Sbjct: 353 NGIIELLRNDVGVDIKVSDPVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVP 412
Query: 363 RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
++ TTRLLVP+S IGCL G+ GS++ EM+RLT AN+ I+P+E+LP S DE+V
Sbjct: 413 DKENIV--TTRLLVPSSDIGCLEGRDGSLL-EMKRLTGANVHIVPREDLPMFVSGADELV 469
Query: 423 QISGDLDLAKDALIQVMTRLRANLF 447
QI GD+ A+DAL+++ +RLR L+
Sbjct: 470 QIIGDIKAARDALVELTSRLRNCLY 494
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 97/174 (55%), Gaps = 14/174 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
ED V++ LCPI K+ S+IG I++ LR D I++ + V GS E+++ + S
Sbjct: 332 EDLVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSDPVTGSNEQILIISSD----- 386
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL + R++ D D + VT +LLVPS IGC+ G+ G
Sbjct: 387 --EGPDDELFPAQEALLHIQTRIV------DLVPDKENIVTTRLLVPSSDIGCLEGRDGS 438
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
+++ ++ TGA + I+ E LP +DELVQI G+ + AL ++ SRL +
Sbjct: 439 LLE-MKRLTGANVHIVPREDLPMFVSGADELVQIIGDIKAARDALVELTSRLRN 491
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 95/203 (46%), Gaps = 33/203 (16%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
S P+D + R++C A GGVIGK G+II IRQ +GA I V ++ +I
Sbjct: 49 SKPQDQSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELVPGDEERIIE 108
Query: 333 VSSK-----EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-------------------- 367
+S E + S EA+ + R E E G
Sbjct: 109 ISDTRRRDPEGRMPSFSPAQEALFLIHERILES-EMSPGFNGMGYGPEDEEDDYGGVRGG 167
Query: 368 ------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKE-NLPKIASEDDE 420
TRL+V +GCL+GKGG II +MR TK IRILP++ NLP+ S +E
Sbjct: 168 GGGGCGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCISMSEE 227
Query: 421 MVQISGDLDLAKDALIQVMTRLR 443
+VQI GD + K A+ V +RLR
Sbjct: 228 IVQIVGDTNAVKKAIAIVSSRLR 250
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 228 bits (581), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 156/453 (34%), Positives = 246/453 (54%), Gaps = 36/453 (7%)
Query: 18 YADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
YA +G +KR G +R LC +IG +IG+ G IVKQL+ DT ++IR
Sbjct: 28 YAPNGSSKRSKPPPPPIPVPAG--HVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIR 85
Query: 78 IGETVPGSEERVVTVYSAS--DETNAFEDGDKFV--SPAQDALFKVHDRVIAEELRGDED 133
+ ++ S+ RV+ V + + + A + + V S AQ+A+ +V +R++ D
Sbjct: 86 VEDSPSTSDHRVILVIAPASVNRRIALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGV 145
Query: 134 SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
GG V+ +LL + Q+G VIGKGG++V+ IR E+G++I++L E LP+CA +DE+V+
Sbjct: 146 PPGG-VVSCRLLAETSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVE 204
Query: 194 ISGEASVVKKALCQIASRLHDNPSR--------------SQHLLASAISNSHSSSGSLVG 239
I G+ VKKAL ++ RL D P+ Q L + GS++
Sbjct: 205 IEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGSVLP 264
Query: 240 PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
P + I Y + + R P+ S +E +++C +GGVI
Sbjct: 265 PIPSNTI--------SYASGSRPLSINTERISTLDPKT--SQQEVIFKILCSNDRVGGVI 314
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GKGG I+ ++ E+GA+I V + E D+ LIT+++ E E S V+ + R E
Sbjct: 315 GKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIE 374
Query: 360 K-IER--DSGLI--SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
IE+ DSG + RL+VP++++GCL+GKGG+II+EMR+ + A IRI+ + +PK
Sbjct: 375 AGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKC 434
Query: 415 ASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
ASE+D++VQISG+ +D L + RLR NLF
Sbjct: 435 ASENDQVVQISGEFVNVQDGLYHITGRLRDNLF 467
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 114/191 (59%), Gaps = 8/191 (4%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +++ LC ++G +IG+GG IVK L+ + + I +G V +ER++T+
Sbjct: 297 QEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITI-------T 349
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEEL-RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A E+ + SPAQ+ + V +R I + +G + G V+A+L+VPS+Q+GC++GKGG
Sbjct: 350 ASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGG 409
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
I+ +R +GA IRI+ + +P CA +D++VQISGE V+ L I RL DN S
Sbjct: 410 TIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPS 469
Query: 220 QHLLASAISNS 230
+ L + I +S
Sbjct: 470 KTLNGAGIRSS 480
>gi|224135123|ref|XP_002321989.1| predicted protein [Populus trichocarpa]
gi|222868985|gb|EEF06116.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 228 bits (581), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 152/440 (34%), Positives = 243/440 (55%), Gaps = 48/440 (10%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD
Sbjct: 86 TSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRD 142
Query: 103 EDGD-KFVSPAQDALFKVHDRVIAEELR---------GDEDSD----GGHQVTAKLLVPS 148
+G SPAQ+ALF +HDR++ +L+ G E+ + GG++V +L+V
Sbjct: 143 PEGRMPSFSPAQEALFLIHDRILENDLQYGVVSSGAGGFEEDEYVGRGGNRVATRLVVSR 202
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEH-LPSCALRSDELVQISGEASVVKKALCQ 207
+GC++GKGG+I++ +R ET QIRIL +H LP C S+E+VQ+ G+ + VK A+
Sbjct: 203 MHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSVSEEIVQVIGDVNAVKNAVAI 262
Query: 208 IASRLHDNPSR------------SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
I+SRL ++ R + L + + ++ S+ GP P G + L GP
Sbjct: 263 ISSRLRESQHRDRSHFHGRVQSPERFLDDDYVPHMNTRRSSMDGP----PSFG-SRLSGP 317
Query: 256 YGGYKGDT----AGDWSRSLYSAPRDDLSS----KEFSLRLVCPVANIGGVIGKGGAIIN 307
Y+ + A + + P D + ++ R++CP+ + V+G+ +++
Sbjct: 318 --NYRNNNYSSRAPGFPVDAGADPNADSAQPFYVEDLVFRILCPIDKVNRVVGESDGLVD 375
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL 367
++ E G +KV + D+ +IT+ S+E +D L EA++ +Q R + + +
Sbjct: 376 LLQNEIGVDVKVADPVSGSDEQIITICSEEGPDDELFPAQEALLHIQTRIVDLVADKDNI 435
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
I TTRLLVP+S IGCL G+ GS ++EM LT A I ILPKE LP S DE+VQI G+
Sbjct: 436 I--TTRLLVPSSEIGCLEGRDGS-LSEMESLTGATIEILPKEMLPTYLSGTDELVQIQGE 492
Query: 428 LDLAKDALIQVMTRLRANLF 447
+ A+DAL++V +RLR+ L+
Sbjct: 493 VKAARDALVEVTSRLRSYLY 512
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/172 (36%), Positives = 100/172 (58%), Gaps = 14/172 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
ED V+R LCPI K+ ++G +V L+ + +++ + V GS+E+++T+ S
Sbjct: 350 EDLVFRILCPIDKVNRVVGESDGLVDLLQNEIGVDVKVADPVSGSDEQIITICSE----- 404
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL + R++ +L D+D + +T +LLVPS +IGC+ G+ G
Sbjct: 405 --EGPDDELFPAQEALLHIQTRIV--DLVADKD----NIITTRLLVPSSEIGCLEGRDGS 456
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ + + S TGA I IL E LP+ +DELVQI GE + AL ++ SRL
Sbjct: 457 LSE-MESLTGATIEILPKEMLPTYLSGTDELVQIQGEVKAARDALVEVTSRL 507
>gi|356557593|ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 710
Score = 223 bits (568), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 165/479 (34%), Positives = 254/479 (53%), Gaps = 59/479 (12%)
Query: 18 YADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
+ +GP+KR + P +R LC +IG +IG+ G ++K L+ T +KIR
Sbjct: 20 FHPNGPSKRSRQSKPPPPLSVPPGHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIR 79
Query: 78 IGETVPGSEERVVTVYS-ASDETNAFEDGDKF--VSPAQDALFKVHDRVIAEELRGDEDS 134
I + +R++ V + A+ ++ VS AQ+AL KV DR++ GD
Sbjct: 80 IEDAPQELPDRIILVIADAALSGKILLRNEEVIEVSKAQEALLKVFDRILRSG-GGDRSV 138
Query: 135 DGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D G +V + +L+ + Q G VIGKGG++V+ I+ ETG +IR+L D+ LP CA SDE+++
Sbjct: 139 DVGDRVMSCRLVADAAQAGSVIGKGGKVVERIKKETGCKIRVLTDD-LPLCASASDEIIE 197
Query: 194 ISGEASVVKKALCQIASRLHD-NPSRSQHLLAS------------AISNSHSSSGSLVGP 240
I G S VKKAL ++ RL D +P ++ S A+ + S++ V
Sbjct: 198 IEGRVSSVKKALVAVSQRLQDCHPVDRTKMMGSKPYEIVQYEALDALPRATSTAAPRVTL 257
Query: 241 TAATPIVGIAPLMGPYGGYKGDTA-----------------GDWSRSLYSAPR--DDLSS 281
TAA G + +T ++ ++S P + +SS
Sbjct: 258 TAAP--------RGTLTAVQHETVDHLLLRSSALSTLSSSSNSYATRIHSLPTEVNRVSS 309
Query: 282 -------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+E + R++C +GGVIGKGG I+ ++ E+GA I + + E +D LIT++
Sbjct: 310 LEPKALKQEVTFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRLITIA 369
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEK-IER--DSGLIS---FTTRLLVPTSRIGCLIGKG 388
+ E E S +A V + R E E+ DSGL T RL+VP+S++GCLIGKG
Sbjct: 370 ASENPESRYSPAQKAAVLVFSRSIEVGFEKGLDSGLNKGSIVTVRLVVPSSQVGCLIGKG 429
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
G I++EMR+ T ANIRI+ + +PK AS++D++VQISG+ +DAL M RLR NLF
Sbjct: 430 GVIVSEMRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNAMGRLRDNLF 488
>gi|255561850|ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538859|gb|EEF40458.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 704
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 164/502 (32%), Positives = 255/502 (50%), Gaps = 62/502 (12%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD
Sbjct: 75 TSYRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRD 131
Query: 103 EDGDK-FVSPAQDALFKVHDRVIAEE------LRGDEDSDGG-------HQVTAKLLVPS 148
+G SPAQ+ALF +HDR++ + +ED GG ++V +L+V
Sbjct: 132 PEGRMPAFSPAQEALFLIHDRILESDGQFGMSYANEEDEYGGRGINNSNNRVATRLVVSR 191
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEH-LPSCALRSDELVQISGEASVVKKALCQ 207
+GC++GKGG+I++ +R ET QIRIL +H LP C S+E+VQ+ G+ + VK A+
Sbjct: 192 MHVGCLLGKGGKIIEQMRIETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVNAVKNAIAI 251
Query: 208 IASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM----------GPYG 257
I+SRL + SQH S N H G + P P P M GP
Sbjct: 252 ISSRLRE----SQHRDRSH-GNFH---GRMHSPERFFPDDDYVPHMNNTGRRSSIDGPSF 303
Query: 258 GYKGDTAGDWSRSLYS-----------APRDD----LSSKEFSLRLVCPVANIGGVIGKG 302
G + + ++ S YS AP D + R++CP + V+G+
Sbjct: 304 GSRA-SGPNYRNSNYSSRQYGYNVEAGAPVADSAQPFYGDDLVFRMLCPADKVNKVVGES 362
Query: 303 GAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIE 362
I++ ++ + G +KV + D+ +I +SS+E +D L EA++ +Q + +
Sbjct: 363 DGILDLLQNDIGVDVKVSDPVSGSDEQMIIISSEEGPDDELFPAQEALLHIQTHIIDLVP 422
Query: 363 RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+I T+L+V + IGCL G+ GS+ +EM RLT A I+ILP+E LP SE DE+V
Sbjct: 423 DSDNIIK--TKLIVSSGEIGCLEGRDGSL-SEMERLTGAKIQILPREKLPACVSEADELV 479
Query: 423 QISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSEN--GSDGLNYESRDS 480
QI G++ A+DAL++V +RLR+ L+ T P+ +P + N G + + + +
Sbjct: 480 QIEGEIKAARDALVEVTSRLRSYLYKEYFQKDTPPPI--SVPSTGNALGMEAASPNNINP 537
Query: 481 KRHGRG---PPYGGYGSSDLAA 499
R G PP Y + AA
Sbjct: 538 PRDGHSGGEPPAANYHTPKTAA 559
>gi|255537898|ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 679
Score = 222 bits (566), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 178/497 (35%), Positives = 266/497 (53%), Gaps = 77/497 (15%)
Query: 9 GKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQL 68
KR H + +G +K + T + + + V+R LCP K G IIG+GG I+ Q+
Sbjct: 8 AKRPHDRNHTETNGKSKLQKTVNSPVRGV------VFRILCPASKTGGIIGKGGAIISQI 61
Query: 69 RIDTKSKIRIGETVPGSEERVVTVYSASD------------------------------- 97
R +T +K+R+ ETVPGS+ERVV + + SD
Sbjct: 62 RQETGAKVRVEETVPGSDERVVIIAAGSDKEMEVNNAEQNRGDSDDKEPNVGEESNGKQA 121
Query: 98 ---------ETNAFEDGDKFV---SPAQDALFKVHDRVIAEELR---GDEDSDGGHQVTA 142
ET + E K V S Q AL V +R++ E G+E+ T
Sbjct: 122 GSDEDDENKETVSVEHSTKSVRETSSLQKALVLVFERMLEAEPEMDEGNEEKKKPSMSTL 181
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+LLV S Q+GC++GKGG +++ + +E+GAQIRIL + LP CA +DELVQI+GE ++
Sbjct: 182 RLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKLPICASPTDELVQIAGEVDAIR 241
Query: 203 KALCQIASRLHDNPSRSQHLLA--SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY- 259
KAL +A +L +NP + S +SHS L P A P PY +
Sbjct: 242 KALQSVAQQLLENPPKDPEAYPPISTGPSSHSFGHPLPRPEAYPP---------PYHSFN 292
Query: 260 -KGDTAGDWSRSLYSA-------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+G T G R + P D+ + RL+C +GGVIGKGGAII ++Q
Sbjct: 293 ARGTTYGAGPREFHEGGMPGRMRPAPDM----LTFRLLCLDEKVGGVIGKGGAIIKTLQQ 348
Query: 312 ESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-ISF 370
E+G IKV ++ +D +I +S +D +SA +AV+R+Q R + + G +
Sbjct: 349 ETGCEIKVLEGVSDSEDRIILISGPAHPDDRISAAQDAVLRVQTRIARALPLPEGKEKAV 408
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
RLLV +++IGCL+GKGG+I+ EMR+ T A IRIL K+ +PK ASE++E+VQI+G+ ++
Sbjct: 409 IGRLLVSSNQIGCLLGKGGAIMAEMRKSTGAYIRILGKDQIPKCASENEEVVQINGEHEV 468
Query: 431 AKDALIQVMTRLRANLF 447
++AL+Q+ TRLR + F
Sbjct: 469 VQEALLQITTRLRNHFF 485
>gi|224118310|ref|XP_002317787.1| predicted protein [Populus trichocarpa]
gi|222858460|gb|EEE96007.1| predicted protein [Populus trichocarpa]
Length = 655
Score = 221 bits (563), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 156/475 (32%), Positives = 247/475 (52%), Gaps = 40/475 (8%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD +
Sbjct: 62 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRDPE 118
Query: 105 GD-KFVSPAQDALFKVHDRVIAEELR---------GDEDSD----GGHQVTAKLLVPSDQ 150
G SPAQ+ALF +HDR++ +L+ G E+ + GG++V +L+V
Sbjct: 119 GRMPSFSPAQEALFLIHDRILENDLQYGVVSSGVGGLEEDEYVGRGGNRVATRLVVSRMH 178
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEH-LPSCALRSDELVQISGEASVVKKALCQIA 209
+GC++GKGG+I++ +R ET QIRIL +H LP C S+E+VQ+ G+ S VK A+ I+
Sbjct: 179 VGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVSAVKNAVAIIS 238
Query: 210 SRLHDNPSRSQHLLASAI------------SNSHSSSGSLVGPTA-ATPIVGIAPLMGPY 256
SRL ++ R + + + ++ S+ GP + + + G Y
Sbjct: 239 SRLRESQHRDRSHFHGRVHSPERLFDDDYAPHMNTRRSSMDGPPSFGSRVPGSNYRNNNY 298
Query: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
A D + ++ R++CP+ + V+G+ I++ ++ E G
Sbjct: 299 SSRASGFAADAGADPIADSAQPFYVEDLVFRILCPIDKLNRVVGESDGIVDLLQNEIGVD 358
Query: 317 IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLV 376
+KV + D+ +IT+ S+E +D L EA++ +Q R + + + + TTRLLV
Sbjct: 359 VKVADPVSGSDEQIITIFSEEGPDDELFPAQEALLHIQTRIVDLVPDNDHIT--TTRLLV 416
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALI 436
+S IGCL G+ S+ +E+ RLT A I ILPKE LP S DE+VQI G++ A+DAL+
Sbjct: 417 RSSEIGCLEGRDASL-SEIERLTGATIEILPKEKLPSYLSGIDEIVQIEGEIRAARDALV 475
Query: 437 QVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGG 491
+V +RLR+ ++ F LP PVS G G + S R P GG
Sbjct: 476 EVTSRLRSYIYK-----DVFEKDLPP-PVSAPGLAGGMQAASPSPTPAREGPIGG 524
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/172 (36%), Positives = 93/172 (54%), Gaps = 14/172 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
ED V+R LCPI K+ ++G IV L+ + +++ + V GS+E+++T++S
Sbjct: 324 EDLVFRILCPIDKLNRVVGESDGIVDLLQNEIGVDVKVADPVSGSDEQIITIFSE----- 378
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL + R++ D D H T +LLV S +IGC+ G+
Sbjct: 379 --EGPDDELFPAQEALLHIQTRIV------DLVPDNDHITTTRLLVRSSEIGCLEGRDAS 430
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ + I TGA I IL E LPS DE+VQI GE + AL ++ SRL
Sbjct: 431 LSE-IERLTGATIEILPKEKLPSYLSGIDEIVQIEGEIRAARDALVEVTSRL 481
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 23/182 (12%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK-----EFF 339
S R++C GGVIGK G+II IRQ +GA I V ++ +I +S E
Sbjct: 61 SYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISDTRRRDPEGR 120
Query: 340 EDTLSATIEAVVRLQPRCSEK-------------IERDS----GLISFTTRLLVPTSRIG 382
+ S EA+ + R E +E D G TRL+V +G
Sbjct: 121 MPSFSPAQEALFLIHDRILENDLQYGVVSSGVGGLEEDEYVGRGGNRVATRLVVSRMHVG 180
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKEN-LPKIASEDDEMVQISGDLDLAKDALIQVMTR 441
CL+GKGG II +MR TK IRILP+++ LP+ S +E+VQ+ GD+ K+A+ + +R
Sbjct: 181 CLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSMSEEIVQVVGDVSAVKNAVAIISSR 240
Query: 442 LR 443
LR
Sbjct: 241 LR 242
>gi|357476219|ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355509450|gb|AES90592.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 616
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 153/428 (35%), Positives = 233/428 (54%), Gaps = 35/428 (8%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
V+R LC +IG+ IG+ G ++K L+ T ++IRI + ERV+ V N
Sbjct: 20 VVFRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVI-----VNLN 74
Query: 103 EDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
DGD ++P Q+AL KV +R++ D + G V+ +LLV + Q G VIGKGG +
Sbjct: 75 GDGDVSLNP-QEALLKVFERILDVAAAESDGNGVGDRVVSCRLLVNAGQAGGVIGKGGMV 133
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V IR++TG +IR+L D+ LP+C SDE+++I G AS VKKAL +A RL D P +
Sbjct: 134 VAKIRADTGCRIRVLNDK-LPACTKPSDEIIEIQGIASSVKKALVAVAGRLQDCPPLDRT 192
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD--------TAGDWSRSLYS 273
+ + T+A P G+ L + + + G S+S
Sbjct: 193 KMMGT-----RPYEAFQNETSAVPHEGLTDLNMDFRLQRSSAISTSSIRSNGVPSKSHPL 247
Query: 274 APRDDLSS--------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
+ D+ S +E + R++C IG V+GKGG+I+ ++ E+GA I V E
Sbjct: 248 SVEDNRVSSLDPEALKQEVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISVGPPVVE 307
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPR----CSEKI--ERDSGLISFTTRLLVPTS 379
+D LIT+++ E E S EAVV + R C EK+ R + S T +L+VP++
Sbjct: 308 CEDRLITITALENPESRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESSVTAQLVVPSN 367
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
++G L+GKGG+I++EMR+ T +IRI +PK AS +D++VQISG+L +DAL
Sbjct: 368 QVGVLLGKGGAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDALYNAT 427
Query: 440 TRLRANLF 447
RLR ++F
Sbjct: 428 RRLRDHIF 435
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 104/177 (58%), Gaps = 9/177 (5%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +R LC +IG+++G+GG IVK L+ +T + I +G V E+R++T+
Sbjct: 264 QEVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISVGPPVVECEDRLITI-------T 316
Query: 101 AFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A E+ + SPAQ+A+ V R I E D S+ VTA+L+VPS+Q+G ++GKG
Sbjct: 317 ALENPESRFSPAQEAVVLVFCRSIECCIEKVVDWRSNKESSVTAQLVVPSNQVGVLLGKG 376
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G IV +R T IRI ++ +P CA +D++VQISGE V+ AL RL D+
Sbjct: 377 GAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDALYNATRRLRDH 433
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 179/556 (32%), Positives = 286/556 (51%), Gaps = 67/556 (12%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLR 69
KR Q + ++ N++R D+ I E VYR LCPI +G +IG+ G+++ +R
Sbjct: 6 KRKQIQRNNSESNRNQKRRISHDK---INRDELVVYRILCPIDVVGGVIGKSGKVINAIR 62
Query: 70 IDTKSKIRIGETVPGSEERVVTVYSA----SDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
+TK+KI++ + + G +RV+T+Y + +E + ++ + AQDAL KV+D ++A
Sbjct: 63 HNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVA 122
Query: 126 --EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLP 182
EE + D +LLVP Q +IGK G+ ++ IR T A ++++ KD P
Sbjct: 123 SDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDP 182
Query: 183 S--CALRSDELVQISGEASVVKKALCQIASRLHD-NP-------SRSQHLLASAI----- 227
S CA+ D +V ISGE VK+AL +++ ++ NP S SQ + A+++
Sbjct: 183 SHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVIVPSD 242
Query: 228 -SNS-------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD-- 277
SNS +S+ ++ A P A + + GY A S P
Sbjct: 243 LSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHG 302
Query: 278 ---DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE-GDD-CLIT 332
S+E +++CP+ NI VIGKGG+ I +IR+ SG+ I+V+ S T+ GDD C+I
Sbjct: 303 FGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVII 362
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
V++ E +D S +EAV+ LQ E I D + +LLV + IGC+IGK GS+I
Sbjct: 363 VTATESPDDMKSMAVEAVLLLQ----EYIN-DEDAENVKMQLLVSSKVIGCVIGKSGSVI 417
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R+ T ANI I + D++V++SG++ +DALIQ++ RLR ++ + +
Sbjct: 418 NEIRKRTNANICIS--------KGKKDDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDS 469
Query: 453 VSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYGSSDLAAGDSYGSYGSSQLG 512
V+T P P +D ++ S S P + S +A+ + YGS G
Sbjct: 470 VATRKP-----PAR---TDNCSFLSGSSNAGYTLPSF----MSSMASTSGFHGYGSFPAG 517
Query: 513 GTGSAYGSYGSYSSGR 528
+ GS G YS GR
Sbjct: 518 --DNVLGSTGPYSYGR 531
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 158/339 (46%), Gaps = 68/339 (20%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE--TVPGSEERVVTVYSASDE 98
E+ V++ LCP+ I +IG+GG +K++R + S I + + T G +E V+ V
Sbjct: 310 EELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIV------ 363
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A E D S A +A+ + +E DED++ V +LLV S IGCVIGK
Sbjct: 364 -TATESPDDMKSMAVEAVL------LLQEYINDEDAEN---VKMQLLVSSKVIGCVIGKS 413
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN--- 215
G ++ IR T A I I K + D+LV++SGE S V+ AL QI RL ++
Sbjct: 414 GSVINEIRKRTNANICISKG--------KKDDLVEVSGEVSSVRDALIQIVLRLREDVLG 465
Query: 216 ----------PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAG 265
P+R+ + S S S G T + + +A G + GY AG
Sbjct: 466 DKDSVATRKPPARTDNC-------SFLSGSSNAGYTLPSFMSSMASTSG-FHGYGSFPAG 517
Query: 266 D---WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
D S YS R SS +L ++ P + V+GKGG + IR+ SGA I++ +S
Sbjct: 518 DNVLGSTGPYSYGRLPSSS---ALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISAS 574
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
T D + LS T+E Q RC+E +
Sbjct: 575 KTSHGDHIA----------LLSGTLE-----QMRCAENL 598
>gi|30684386|ref|NP_849406.1| KH domain-containing protein [Arabidopsis thaliana]
gi|24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsis thaliana]
gi|332658635|gb|AEE84035.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 532
Score = 218 bits (554), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 179/556 (32%), Positives = 286/556 (51%), Gaps = 67/556 (12%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLR 69
KR Q + ++ N++R D+ I E VYR LCPI +G +IG+ G+++ +R
Sbjct: 6 KRKQIQRNNSESNRNQKRRISHDK---INRDELVVYRILCPIDVVGGVIGKSGKVINAIR 62
Query: 70 IDTKSKIRIGETVPGSEERVVTVYSA----SDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
+TK+KI++ + + G +RV+T+Y + +E + ++ + AQDAL KV+D ++A
Sbjct: 63 HNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVA 122
Query: 126 --EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLP 182
EE + D +LLVP Q +IGK G+ ++ IR T A ++++ KD P
Sbjct: 123 SDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDP 182
Query: 183 S--CALRSDELVQISGEASVVKKALCQIASRLHD-NP-------SRSQHLLASAI----- 227
S CA+ D +V ISGE VK+AL +++ ++ NP S SQ + A+++
Sbjct: 183 SHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVIVPSD 242
Query: 228 -SNS-------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD-- 277
SNS +S+ ++ A P A + + GY A S P
Sbjct: 243 LSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHG 302
Query: 278 ---DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE-GDD-CLIT 332
S+E +++CP+ NI VIGKGG+ I +IR+ SG+ I+V+ S T+ GDD C+I
Sbjct: 303 FGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVII 362
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
V++ E +D S +EAV+ LQ E I D + +LLV + IGC+IGK GS+I
Sbjct: 363 VTATESPDDMKSMAVEAVLLLQ----EYIN-DEDAENVKMQLLVSSKVIGCVIGKSGSVI 417
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R+ T ANI I + D++V++SG++ +DALIQ++ RLR ++ + +
Sbjct: 418 NEIRKRTNANICIS--------KGKKDDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDS 469
Query: 453 VSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYGSSDLAAGDSYGSYGSSQLG 512
V+T P P +D ++ S S P + S +A+ + YGS G
Sbjct: 470 VATRKP-----PAR---TDNCSFLSGSSNAGYTLPSF----MSSMASTSGFHGYGSFPAG 517
Query: 513 GTGSAYGSYGSYSSGR 528
+ GS G YS GR
Sbjct: 518 --DNVLGSTGPYSYGR 531
>gi|302143921|emb|CBI23026.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 147/430 (34%), Positives = 232/430 (53%), Gaps = 46/430 (10%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD
Sbjct: 4 TSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRD 60
Query: 103 EDG--DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+G +F SPAQ+ALF +HDR++ +SD G ++V +GC++GKGG+
Sbjct: 61 PEGRMPQF-SPAQEALFMIHDRIL--------ESDAG--FGNGMVVSRMHVGCLLGKGGK 109
Query: 161 IVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
I++ +R ET QIRIL +D +LP C S+E+VQ+ G+ + VK A+ I+SRL ++ R
Sbjct: 110 IIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIANISSRLRESQHRD 169
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG------------------YKG 261
+ I SS P + AP P G +
Sbjct: 170 RSHFHGRI---QSSPERFFPPDDDYSHMNNAPRRMPIDGNSFGSRVSTGLVGTRSNSFAS 226
Query: 262 DTAGDWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
T+G ++ +AP D + + + R++CPV + V+G+ II ++ E G +
Sbjct: 227 RTSG-YTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDGIIELLQNEIGVDV 285
Query: 318 KVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVP 377
KV ++ +I ++S+E +D L EA++ +Q R + +I TTRLLVP
Sbjct: 286 KVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIVNLLPDKENVI--TTRLLVP 343
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
+S IGC G+ S+ +EMRRLT ANI+I+P+E LP S DE+++I G++ A+DAL++
Sbjct: 344 SSEIGCFEGRDCSL-SEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEIKAARDALVE 402
Query: 438 VMTRLRANLF 447
V +RLR+ L+
Sbjct: 403 VTSRLRSYLY 412
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 1 MAGQR-NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIG 59
+ G R NS+ R+ T + P D+ QF+ ED V+R LCP+ K+ ++G
Sbjct: 216 LVGTRSNSFASRTSGYTLESGAAP-----IADNAQQFL--GEDIVFRILCPVDKVECVVG 268
Query: 60 RGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKV 119
I++ L+ + +++ + V GS E+++ + S E D + PAQ+AL +
Sbjct: 269 ESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSE-------EGPDDELFPAQEALLHI 321
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
R++ L D++ + +T +LLVPS +IGC G+ + + +R TGA I+I+ E
Sbjct: 322 QTRIV--NLLPDKE----NVITTRLLVPSSEIGCFEGRDCSLSE-MRRLTGANIQIVPRE 374
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRL 212
LP+ +DEL++I GE + AL ++ SRL
Sbjct: 375 QLPAFISGTDELLEIVGEIKAARDALVEVTSRL 407
>gi|225455340|ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 661
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 235/443 (53%), Gaps = 49/443 (11%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD
Sbjct: 67 TSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEI---SDTRRRD 123
Query: 103 EDG--DKFVSPAQDALFKVHDRVIAEE-------------LRGDEDSDGGHQVTAKLLVP 147
+G +F SPAQ+ALF +HDR++ + GG++V +++V
Sbjct: 124 PEGRMPQF-SPAQEALFMIHDRILESDAGFGNGFGGNGDDDDDFGPRGGGNRVATRMVVS 182
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALC 206
+GC++GKGG+I++ +R ET QIRIL +D +LP C S+E+VQ+ G+ + VK A+
Sbjct: 183 RMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAIA 242
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG-------- 258
I+SRL ++ R + I SS P + AP P G
Sbjct: 243 NISSRLRESQHRDRSHFHGRI---QSSPERFFPPDDDYSHMNNAPRRMPIDGNSFGSRVS 299
Query: 259 ----------YKGDTAGDWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGVIGKGGA 304
+ T+G ++ +AP D + + + R++CPV + V+G+
Sbjct: 300 TGLVGTRSNSFASRTSG-YTLESGAAPIADNAQQFLGEDIVFRILCPVDKVECVVGESDG 358
Query: 305 IINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
II ++ E G +KV ++ +I ++S+E +D L EA++ +Q R +
Sbjct: 359 IIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIVNLLPDK 418
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
+I TTRLLVP+S IGC G+ S+ +EMRRLT ANI+I+P+E LP S DE+++I
Sbjct: 419 ENVI--TTRLLVPSSEIGCFEGRDCSL-SEMRRLTGANIQIVPREQLPAFISGTDELLEI 475
Query: 425 SGDLDLAKDALIQVMTRLRANLF 447
G++ A+DAL++V +RLR+ L+
Sbjct: 476 VGEIKAARDALVEVTSRLRSYLY 498
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 113/213 (53%), Gaps = 22/213 (10%)
Query: 1 MAGQR-NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIG 59
+ G R NS+ R+ T + P D+ QF+ ED V+R LCP+ K+ ++G
Sbjct: 302 LVGTRSNSFASRTSGYTLESGAAP-----IADNAQQFL--GEDIVFRILCPVDKVECVVG 354
Query: 60 RGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKV 119
I++ L+ + +++ + V GS E+++ + S E D + PAQ+AL +
Sbjct: 355 ESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSE-------EGPDDELFPAQEALLHI 407
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
R++ L D++ + +T +LLVPS +IGC G+ + + +R TGA I+I+ E
Sbjct: 408 QTRIV--NLLPDKE----NVITTRLLVPSSEIGCFEGRDCSLSE-MRRLTGANIQIVPRE 460
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRL 212
LP+ +DEL++I GE + AL ++ SRL
Sbjct: 461 QLPAFISGTDELLEIVGEIKAARDALVEVTSRL 493
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 149/423 (35%), Positives = 236/423 (55%), Gaps = 29/423 (6%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LC ++G+IIG+ G ++K L+ T +KIRI + P S +RV+ V + + A D
Sbjct: 27 FRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSAPA----AASD 82
Query: 105 GDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
G+ VS AQ AL KV DRV +A E G E D V+ +LL + Q+G VIGK G++V
Sbjct: 83 GE--VSTAQVALLKVFDRVLDVAAETAGTEVGD--RVVSCRLLADTSQVGAVIGKAGKVV 138
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
+ IR +TG +IR+L +E LP+C SDE+V++ G+ + VKKAL ++ L D P +
Sbjct: 139 EKIRMDTGCKIRVL-NEGLPACTAPSDEIVEVEGQLTSVKKALVAVSGCLQDCPPPDRTK 197
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGI-------APLMGPYGGYKGDTAGDWSRSL---- 271
+ + S + P + + I + L G+ +G S
Sbjct: 198 MTGSRHYEVVRSETCSVPLESLTNLHIDRRLQRSSTLSTLSNRSNGNASGAPKLSAEVNR 257
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
SA +E + R++C +G VIGKGG+I+ ++ ESGA I S E +D L+
Sbjct: 258 VSALDPKALQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLV 317
Query: 332 TVS-SKEFFEDTLSATIEAVVRLQPRCSEK-IERDSGLIS-----FTTRLLVPTSRIGCL 384
T++ S++ E S +AVV + + E +E+ + S T +L+VP++++GCL
Sbjct: 318 TITASEQNPESRYSPAQKAVVLVFSKSVEAGVEKGLDMGSKKESYVTAQLVVPSNQVGCL 377
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
+GKGG+I++EMR+ T ANIR++ + +PK S++D++VQISG+ + A+ RLR
Sbjct: 378 LGKGGAIVSEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYNATGRLRD 437
Query: 445 NLF 447
NLF
Sbjct: 438 NLF 440
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 153/295 (51%), Gaps = 24/295 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +R +C ++G++IG+GG IV+ L+ ++ + I G ++ E+R+VT+ T
Sbjct: 268 QEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLVTI------TA 321
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRG--DEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+ ++ + SPAQ A+ V + + + D S VTA+L+VPS+Q+GC++GKG
Sbjct: 322 SEQNPESRYSPAQKAVVLVFSKSVEAGVEKGLDMGSKKESYVTAQLVVPSNQVGCLLGKG 381
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G IV +R TGA IR++ ++ +P C +D+LVQISGE S V+ A+ RL DN
Sbjct: 382 GAIVSEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIYNATGRLRDNLFV 441
Query: 219 SQHLLASAISNSHSSSG--------------SLVGPTAATPIVGIAPLMGPYGGYKGDTA 264
S A S S SG SL G A + GI + G +G T+
Sbjct: 442 STQNSGGARSLSSVLSGGKPTVAVSLSLNRHSLPGLQAPQTVAGINSRV-TNGVSRGLTS 500
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
L S + + + ++++ P IG V G+ G+ + ++RQ SGA + V
Sbjct: 501 QKGGLELVSGSKTAIVTNT-TVQIAVPDDVIGSVYGENGSNLARLRQISGAKVIV 554
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 86/163 (52%), Gaps = 6/163 (3%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
+ + RL+C + +G +IGK G +I +++ +GA I+++ + + D +I VS+
Sbjct: 22 TTHVTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSAPAAAS 81
Query: 341 DTLSATIEAVV-----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
D +T + + R+ +E + G + RLL TS++G +IGK G ++ ++
Sbjct: 82 DGEVSTAQVALLKVFDRVLDVAAETAGTEVGDRVVSCRLLADTSQVGAVIGKAGKVVEKI 141
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
R T IR+L E LP + DE+V++ G L K AL+ V
Sbjct: 142 RMDTGCKIRVL-NEGLPACTAPSDEIVEVEGQLTSVKKALVAV 183
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 75/188 (39%), Gaps = 67/188 (35%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS--- 195
VT +LL + ++G +IGK G +++ ++ TGA+IRI E P + D ++ +S
Sbjct: 24 HVTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRI---EDAPPDS--PDRVILVSAPA 78
Query: 196 ----GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
GE S + AL ++ R+ D
Sbjct: 79 AASDGEVSTAQVALLKVFDRVLD------------------------------------- 101
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+TAG ++ + S RL+ + +G VIGK G ++ +IR
Sbjct: 102 -------VAAETAG-----------TEVGDRVVSCRLLADTSQVGAVIGKAGKVVEKIRM 143
Query: 312 ESGAAIKV 319
++G I+V
Sbjct: 144 DTGCKIRV 151
>gi|297804330|ref|XP_002870049.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315885|gb|EFH46308.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 184/576 (31%), Positives = 288/576 (50%), Gaps = 86/576 (14%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDD-----RDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEI 64
KR +Q + + N++R ++ RD+ +I YR LCPI +G +IG+ G++
Sbjct: 6 KRKQNQRNNNESNRNQKRRISNNGEKINRDELVI------YRILCPIDVVGGVIGKSGKV 59
Query: 65 VKQLRIDTKSKIRIGETVPGSEERVVTVYSA-----SDETNAFEDGDKFVSPAQDALFKV 119
+ +R +TK+KI++ + + G +RV+T+Y + +E + + + + AQDAL KV
Sbjct: 60 INAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKKEEEIDFMKSETEPLCCAQDALLKV 119
Query: 120 HDRVIA---EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
+D ++A E ++ D D + LLVPS Q +IGK G+ ++ IRS T A ++++
Sbjct: 120 YDAIVASDEENIKIDRDD----KKECLLLVPSSQSFSLIGKAGENIKRIRSTTRASVKVV 175
Query: 177 -KDEHLPS--CALRSDELVQISGEASVVKKALCQIASRLHD-NP-------SRSQHLLAS 225
KD PS CA+ D +V ISGE VKKAL +++ L+ NP S Q + AS
Sbjct: 176 SKDVSDPSHVCAMDYDNIVVISGEPESVKKALFAVSAILYKINPREHIPLDSTGQDVPAS 235
Query: 226 AI-----SNS-------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
I SNS +S+ ++ A P A + + GY A S
Sbjct: 236 IIVSSDLSNSVYPQTGFYSNQDHILQQRAGVPSYFNALSVSNFQGYAETAANPMPVFASS 295
Query: 274 APRD-----DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE-GD 327
P SKE L+++CP++NI VIGKGG+ I +IR+ SG+ I+V+ S T+ GD
Sbjct: 296 LPVTHGFGGSSRSKELVLKVLCPLSNITRVIGKGGSTIKRIRETSGSCIEVNDSRTKCGD 355
Query: 328 D-CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIG 386
D C+I V++ E +D S +EAV+ LQ E I D +L V + IGC+IG
Sbjct: 356 DECVIIVTATESPDDMKSMAVEAVLLLQ----EYIN-DEDAEKVKMQLFVSSKDIGCVIG 410
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
K GS+I E+R+ T ANI I + D++V+++G++ ++A+IQ++ RLR ++
Sbjct: 411 KSGSVINEIRKRTNANICIS--------KGKKDDLVEVAGEISSVRNAIIQIVLRLREDV 462
Query: 447 F-DREGAVSTFVPVLPYIPVSE-NGSDGLNYESRDSKRHGRGPPYGGYGSSDLAAGDSYG 504
DR+ ++ P S +GS Y + GYGS AGD
Sbjct: 463 LGDRDSVAASRKPPARTDNYSLFSGSSNAGYTLPSFMSSASSSGFHGYGS--FPAGD--- 517
Query: 505 SYGSSQLGGTGSAYGSYGSYSSGR--SGSGLSSHAP 538
+ +GS YS GR S S L P
Sbjct: 518 -----------NVFGSVSPYSFGRLPSSSALEILIP 542
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/334 (31%), Positives = 158/334 (47%), Gaps = 58/334 (17%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE--TVPGSEERVVTVYSASDE 98
++ V + LCP+ I +IG+GG +K++R + S I + + T G +E V+ V
Sbjct: 309 KELVLKVLCPLSNITRVIGKGGSTIKRIRETSGSCIEVNDSRTKCGDDECVIIV------ 362
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A E D S A +A+ + +E DED++ +V +L V S IGCVIGK
Sbjct: 363 -TATESPDDMKSMAVEAVL------LLQEYINDEDAE---KVKMQLFVSSKDIGCVIGKS 412
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH----- 213
G ++ IR T A I I K + D+LV+++GE S V+ A+ QI RL
Sbjct: 413 GSVINEIRKRTNANICISKG--------KKDDLVEVAGEISSVRNAIIQIVLRLREDVLG 464
Query: 214 --DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGD---WS 268
D+ + S+ A + S S S G T P + + GY AGD S
Sbjct: 465 DRDSVAASRKPPARTDNYSLFSGSSNAGYT--LPSFMSSASSSGFHGYGSFPAGDNVFGS 522
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGD 327
S YS R SS +L ++ P + V+GKGG + IR+ SGA I++ DS +++GD
Sbjct: 523 VSPYSFGRLPSSS---ALEILIPANAMSKVMGKGGGNLENIRRISGAMIEISDSKTSQGD 579
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
+ LS T+E Q RC+E +
Sbjct: 580 HIAL-----------LSGTLE-----QMRCAENL 597
>gi|297847528|ref|XP_002891645.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297337487|gb|EFH67904.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 144/452 (31%), Positives = 227/452 (50%), Gaps = 75/452 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP-GSEERVVTVYSAS--- 96
E +R LCP + G+IIG+GG +++ L+ T SKIR+ + +P SEERVV + + S
Sbjct: 17 ESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76
Query: 97 -DETNAFE-----------------------DGDKFVSPAQDALFKVHDRVI----AEEL 128
D++N F+ D ++ S AQ AL +V +R++ A +
Sbjct: 77 KDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASV 136
Query: 129 RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
GD G + +++V +Q+ ++ KGG+++Q IR ++GA +RI + +P CA
Sbjct: 137 DGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAFPG 196
Query: 189 DELVQ--ISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPI 246
D ++Q I+G+ S VKKAL I + L + + A P
Sbjct: 197 DVVIQMKITGKFSSVKKALLLITNCLQE--------------------------SGAPPT 230
Query: 247 VGIAPLMGPYGGYKGDTAG-----DWSRSLYSAPRD------DLSSKEFSLRLVCPVANI 295
P P GY D W P D + +E S RL+CP +
Sbjct: 231 WDECPF--PQPGYPPDYHSMEYHPQWDHPPNPMPEDVVPFNRPVVEEEVSFRLLCPADKV 288
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQP 355
G +IGKGGA++ ++ ESGA+IKV + + ++ +I +S++E E S + V+R+
Sbjct: 289 GSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQDGVMRVHN 348
Query: 356 RCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIA 415
R E S + RLLV + IG L+GKGG +I+EMRR T A+IR+ K+ K
Sbjct: 349 RIVEIGFEPSAAV--VARLLVHSPYIGRLLGKGGHLISEMRRATGASIRVFAKDQATKYE 406
Query: 416 SEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
S+ DE+VQ+ G+L +DAL Q++ RLR +F
Sbjct: 407 SQHDEIVQVIGNLKTVQDALFQILCRLREAMF 438
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 93/224 (41%), Gaps = 54/224 (24%)
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-------------------- 319
+++ RL+CP A G +IGKGG++I ++ +G+ I+V
Sbjct: 15 AAESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSG 74
Query: 320 ------------DSSSTE-----GDDCLITVSSKEFFEDTLSATIEAVVRLQPRC----- 357
+ SS E G +C T + E+ S+ A++R+ R
Sbjct: 75 KKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDD--EEAPSSAQMALLRVLERIVFGDD 132
Query: 358 SEKIE---RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ ++ D G R++V +++ L+ KGG +I +R + A +RI + +P
Sbjct: 133 AASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPC 192
Query: 415 ASEDDEMVQ--ISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
A D ++Q I+G K AL+ L N GA T+
Sbjct: 193 AFPGDVVIQMKITGKFSSVKKALL-----LITNCLQESGAPPTW 231
>gi|15217969|ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana]
gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana]
gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis thaliana]
gi|110735740|dbj|BAE99849.1| hypothetical protein [Arabidopsis thaliana]
gi|332194564|gb|AEE32685.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 621
Score = 209 bits (532), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 140/452 (30%), Positives = 231/452 (51%), Gaps = 76/452 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP-GSEERVVTVYSAS--- 96
E +R LCP + G+IIG+GG +++ L+ T SKIR+ + +P SEERVV + + S
Sbjct: 17 ESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 76
Query: 97 -DETNAFE-----------------------DGDKFVSPAQDALFKVHDRVI----AEEL 128
DE+N + D ++ S AQ AL +V +R++ A +
Sbjct: 77 KDESNVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDAATV 136
Query: 129 RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
GDE G + +++V +Q+ ++ KGG+++Q IR ++GA +RI + +P CA
Sbjct: 137 DGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPCAFPG 196
Query: 189 DELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG 248
D ++Q++G+ S VKKAL + + L + + A P
Sbjct: 197 DVVIQMNGKFSSVKKALLLVTNCLQE--------------------------SGAPPTWD 230
Query: 249 IAPLMGPYGGYKGDTAG-----DWSRSLYSAPRDDLS-------SKEFSLRLVCPVANIG 296
P P GY + W + +D+ +E + RL+CP +G
Sbjct: 231 ECPF--PQPGYPPEYHSMEYHPQWDHPPPNPMPEDVGPFNRPVVEEEVAFRLLCPADKVG 288
Query: 297 GVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR 356
+IGKGGA++ ++ ESGA+IKV + + ++ +I +S++E E S + V+R+ R
Sbjct: 289 SLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQDGVMRVHNR 348
Query: 357 CSE-KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIA 415
E E + +++ RLLV + IG L+GKGG +I+EMRR T A+IR+ K+ K
Sbjct: 349 IVEIGFEPSAAVVA---RLLVHSPYIGRLLGKGGHLISEMRRATGASIRVFAKDQATKYE 405
Query: 416 SEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
S+ DE+VQ+ G+L +DAL Q++ RLR +F
Sbjct: 406 SQHDEIVQVIGNLKTVQDALFQILCRLREAMF 437
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 52/222 (23%)
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-------------------- 319
+++ RL+CP G +IGKGG++I ++ +G+ I+V
Sbjct: 15 AAESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSG 74
Query: 320 -----------------DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR------ 356
+ +G +C T + E+ S+ A++R+ R
Sbjct: 75 KKKDESNVCDSENPGSEEPKQEKGSECAGTSGGDD--EEAPSSAQMALLRVFERIVFGDD 132
Query: 357 --CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ E D G R++V +++ L+ KGG +I ++R + A +RI + +P
Sbjct: 133 AATVDGDELDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPC 192
Query: 415 ASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
A D ++Q++G K AL+ L N GA T+
Sbjct: 193 AFPGDVVIQMNGKFSSVKKALL-----LVTNCLQESGAPPTW 229
>gi|255563372|ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 698
Score = 209 bits (531), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 150/438 (34%), Positives = 231/438 (52%), Gaps = 47/438 (10%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+ P +R LC +IG IIG+ G I+KQL+ + +KIRI E+ S +RV+TV +
Sbjct: 51 LPPGHVSFRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQ 110
Query: 98 ETNAF--EDGDKFVSPAQDALFKVHDRV--IAEELRG-DEDSDGGHQVTAKLLVPSDQIG 152
+ E + VS AQ+ L +V +R+ +A E G + + GG V+ ++L S Q G
Sbjct: 111 IVSKVRVESEEVDVSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCRMLAGSKQAG 170
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
VIGKGG++V+ IR + G +IR+L D+ LP CA ++E+++I G+ VKKAL ++ L
Sbjct: 171 SVIGKGGKVVEKIRKDCGVKIRVLTDK-LPVCAGPNEEMIEIEGDILSVKKALIAVSRCL 229
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
D + S P+ + + P T + + S
Sbjct: 230 QD---------CQPVDKPRVGSSKYFEAVPQEPLPEMRVEIAPQRNIMVPTMQNNAVSCA 280
Query: 273 SAPRD-------------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P + L +E +++CP +GGVIGKGG II ++ E+GA+I +
Sbjct: 281 PVPHNFLLETDRVPSLDMKLFQQEVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITI 340
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTS 379
++ E D+ LITV + E E SA +AVV + +RL+VP++
Sbjct: 341 GATIAESDERLITVIASENPESRYSAAQKAVVLV-----------------FSRLVVPSN 383
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
++GCL+GKGG II++MR+ T +I+IL + LPK E++++VQISGD KDA+ V
Sbjct: 384 QVGCLLGKGGIIISDMRKTTGTSIKILAGDQLPKCVPENEQVVQISGDFMNVKDAVYHVT 443
Query: 440 TRLRANLFDREGAVSTFV 457
RLR NLF A+ST V
Sbjct: 444 GRLRDNLFS--SALSTPV 459
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 113/205 (55%), Gaps = 36/205 (17%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ V++ LCP +G +IG+GG I+K L+ +T + I IG T+ S+ER++TV
Sbjct: 303 QEVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVI------- 355
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E+ + S AQ A+ V R L+VPS+Q+GC++GKGG
Sbjct: 356 ASENPESRYSAAQKAVVLVFSR---------------------LVVPSNQVGCLLGKGGI 394
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ ++R TG I+IL + LP C ++++VQISG+ VK A+ + RL DN
Sbjct: 395 IISDMRKTTGTSIKILAGDQLPKCVPENEQVVQISGDFMNVKDAVYHVTGRLRDN----- 449
Query: 221 HLLASAISNSHSSSGSLVGPTAATP 245
L +SA+S + S +++ T A+P
Sbjct: 450 -LFSSALSTPVTRSTTVI--TEASP 471
>gi|356516077|ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 647
Score = 208 bits (530), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 145/437 (33%), Positives = 236/437 (54%), Gaps = 42/437 (9%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD
Sbjct: 61 TSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEI---SDTRRRD 117
Query: 103 EDGDK-FVSPAQDALFKVHDRVIAEE-----LRGDED-------SDGGHQVTAKLLVPSD 149
+G SPAQ+AL +H+R++ + DE+ G +V +L+V
Sbjct: 118 PEGRMPSFSPAQEALLLIHERILESDAAFGVAEDDEEYGAGRGGGAGRDRVATRLVVSRM 177
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQI 208
+GC++GKGG+I++ +R ET QIRIL +D +LP C S+E+VQ+ G+ + VK AL I
Sbjct: 178 HVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNALVII 237
Query: 209 ASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI----APLMGPYGGYKGDTA 264
+SRL ++ R + + HS P V + + G G +G
Sbjct: 238 SSRLRESQHRDRSHFHGRV---HSPERFFSPDDDYVPHVTSGSRRSSVDGASFGSRGSNT 294
Query: 265 GDWSRSLYS---------APRDD----LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+ + S AP D +E R++CPV + +IG+ I+ ++
Sbjct: 295 NSRNNNHPSLSYAMEPGAAPVVDDAQGFYGEELVFRILCPVEKVDLIIGESDGIVEFLQS 354
Query: 312 ESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI-ERDSGLISF 370
E G +KV D+ +I ++S+E +D L EA++ +Q R + + ++D+ +
Sbjct: 355 EVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEALLHIQTRIVDLVLDKDN---TI 411
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
TTRL+VP+S I CL GK S ++E+RRLT ANI+ILP+++LP ++ DE+VQI G++
Sbjct: 412 TTRLVVPSSEIECLDGKDVS-LSEIRRLTGANIQILPRDDLPLCVAKTDELVQIVGEIKA 470
Query: 431 AKDALIQVMTRLRANLF 447
A+DA+++V +RLR+ L+
Sbjct: 471 ARDAVVEVTSRLRSYLY 487
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 149/299 (49%), Gaps = 36/299 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ V+R LCP+ K+ IIG IV+ L+ + +++ + V GS+E+++ + S
Sbjct: 325 EELVFRILCPVEKVDLIIGESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIIITSE----- 379
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL + R++ +L D+D+ +T +L+VPS +I C+ GK
Sbjct: 380 --EGPDDELFPAQEALLHIQTRIV--DLVLDKDN----TITTRLVVPSSEIECLDGKDVS 431
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HDN 215
+ + IR TGA I+IL + LP C ++DELVQI GE + A+ ++ SRL D
Sbjct: 432 LSE-IRRLTGANIQILPRDDLPLCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDF 490
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATP-----IVGIAPLMGPYGGYKGDTAGDWSRS 270
R L + + + +SS + + P A T + +A + P G ++ + +
Sbjct: 491 FQRDPIPLPAPLPGAEASSSNNIVPVAETSTTYQNVQTVAAALPP--KETGGSSTEVGKQ 548
Query: 271 LYSAPRDDLSS----------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S RDD+ S +L +V P + +I K + + QI + SGA + +
Sbjct: 549 KESGRRDDVLSGLNRIAVPLVTRSTLEVVIPEYAVPKLIAKSKSKLAQISELSGANVTL 607
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 90/263 (34%), Positives = 127/263 (48%), Gaps = 40/263 (15%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK-----EFF 339
S R++C GGVIGK G+II IRQ +GA I V ++ +I +S E
Sbjct: 62 SYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEISDTRRRDPEGR 121
Query: 340 EDTLSATIEAVVRLQPRCSEK------IERDSGLIS----------FTTRLLVPTSRIGC 383
+ S EA++ + R E E D + TRL+V +GC
Sbjct: 122 MPSFSPAQEALLLIHERILESDAAFGVAEDDEEYGAGRGGGAGRDRVATRLVVSRMHVGC 181
Query: 384 LIGKGGSIITEMRRLTKANIRILPKE-NLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
L+GKGG II +MR TK IRILP++ NLP+ S +E+VQ+ GD++ K+AL+ + +RL
Sbjct: 182 LLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNALVIISSRL 241
Query: 443 RANLF-DR---EGAVST----FVPVLPYIPVSENGS-----DGLNYESRDSKRHGRGP-- 487
R + DR G V + F P Y+P +GS DG ++ SR S + R
Sbjct: 242 RESQHRDRSHFHGRVHSPERFFSPDDDYVPHVTSGSRRSSVDGASFGSRGSNTNSRNNNH 301
Query: 488 PYGGYGSSDLAA---GDSYGSYG 507
P Y AA D+ G YG
Sbjct: 302 PSLSYAMEPGAAPVVDDAQGFYG 324
>gi|8809595|dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 660
Score = 208 bits (529), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 236/428 (55%), Gaps = 33/428 (7%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E VPG ER++ + SD
Sbjct: 68 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEI---SDNRRRD 124
Query: 103 EDGDK-FVSPAQDALFKVHDRVIAEELR-------GDEDSD------GGHQVTAKLLVPS 148
DG SPAQ+ALF VHDR++ E + +E+ D GG +V +L+V
Sbjct: 125 PDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSR 184
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQ 207
+GC++GKGG+I++ +R ET IRIL ++ +LP C S+E+VQI GE + VK AL
Sbjct: 185 MHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAI 244
Query: 208 IASRLHDNPSRSQHLLASAIS-NSHSSSGSLV--GPTAATPIVGIAPLMGPYGGYKGDT- 263
++SRL + SQH S SHS S G + + P G ++ +
Sbjct: 245 VSSRLRE----SQHRDRSNFQGRSHSPERSFAAAGDDYMPQLRRQSSDRFPRGNFRNNNF 300
Query: 264 ---AGDWSRSLYSAPR-DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+++ + P +++ S+E +++CP I V+G+ II+ ++ E G ++V
Sbjct: 301 SSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRV 360
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTS 379
D+ +IT+SS+E +D EA++ +Q + + I LI TTRLLVP+
Sbjct: 361 SDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIPDKDNLI--TTRLLVPSR 418
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
CL GK GS+ +E+ RLT +++IL +E +P+ AS +D ++QI+G++ A++AL+++
Sbjct: 419 DSICLEGKAGSV-SEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELT 477
Query: 440 TRLRANLF 447
LR+++F
Sbjct: 478 LLLRSHMF 485
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 29/235 (12%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N++ R Q++YA+ P G++ + E+ V++ LCP KI ++G I+
Sbjct: 298 NNFSSR---QSNYAEEAPAVP--VGEN-----VYSEELVFQILCPADKIVRVVGESQGII 347
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
L+ + +R+ + V GS+E+++T+ S E D PAQ+AL + ++I
Sbjct: 348 DLLQNEIGVDVRVSDPVAGSDEQIITISSE-------EAPDDPFFPAQEALLHIQTQII- 399
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
D D + +T +LLVPS C+ GK G V I TG ++IL E +P CA
Sbjct: 400 -----DLIPDKDNLITTRLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILAREEIPRCA 453
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
+D ++QI+GE ++AL ++ L RS + + +S S GP
Sbjct: 454 SINDVVIQITGEIRAAREALVELTLLL-----RSHMFKELSQKETPPASTSTTGP 503
>gi|30696273|ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|30725478|gb|AAP37761.1| At5g53060 [Arabidopsis thaliana]
gi|332008915|gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 652
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/428 (33%), Positives = 236/428 (55%), Gaps = 33/428 (7%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E VPG ER++ + SD
Sbjct: 68 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEI---SDNRRRD 124
Query: 103 EDGD-KFVSPAQDALFKVHDRVIAEELR-------GDEDSD------GGHQVTAKLLVPS 148
DG SPAQ+ALF VHDR++ E + +E+ D GG +V +L+V
Sbjct: 125 PDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVVSR 184
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQ 207
+GC++GKGG+I++ +R ET IRIL ++ +LP C S+E+VQI GE + VK AL
Sbjct: 185 MHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELNAVKNALAI 244
Query: 208 IASRLHDNPSRSQHLLASAIS-NSHSSSGSLV--GPTAATPIVGIAPLMGPYGGYKGDT- 263
++SRL + SQH S SHS S G + + P G ++ +
Sbjct: 245 VSSRLRE----SQHRDRSNFQGRSHSPERSFAAAGDDYMPQLRRQSSDRFPRGNFRNNNF 300
Query: 264 ---AGDWSRSLYSAPR-DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+++ + P +++ S+E +++CP I V+G+ II+ ++ E G ++V
Sbjct: 301 SSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVRVVGESQGIIDLLQNEIGVDVRV 360
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTS 379
D+ +IT+SS+E +D EA++ +Q + + I LI TTRLLVP+
Sbjct: 361 SDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLIPDKDNLI--TTRLLVPSR 418
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
CL GK GS+ +E+ RLT +++IL +E +P+ AS +D ++QI+G++ A++AL+++
Sbjct: 419 DSICLEGKAGSV-SEISRLTGTSVQILAREEIPRCASINDVVIQITGEIRAAREALVELT 477
Query: 440 TRLRANLF 447
LR+++F
Sbjct: 478 LLLRSHMF 485
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 114/235 (48%), Gaps = 29/235 (12%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N++ R Q++YA+ P G++ + E+ V++ LCP KI ++G I+
Sbjct: 298 NNFSSR---QSNYAEEAPAV--PVGEN-----VYSEELVFQILCPADKIVRVVGESQGII 347
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
L+ + +R+ + V GS+E+++T+ S E D PAQ+AL + ++I
Sbjct: 348 DLLQNEIGVDVRVSDPVAGSDEQIITISSE-------EAPDDPFFPAQEALLHIQTQII- 399
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
D D + +T +LLVPS C+ GK G V I TG ++IL E +P CA
Sbjct: 400 -----DLIPDKDNLITTRLLVPSRDSICLEGKAGS-VSEISRLTGTSVQILAREEIPRCA 453
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
+D ++QI+GE ++AL ++ L RS + + +S S GP
Sbjct: 454 SINDVVIQITGEIRAAREALVELTLLL-----RSHMFKELSQKETPPASTSTTGP 503
>gi|297792661|ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
gi|297310050|gb|EFH40474.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
Length = 652
Score = 207 bits (528), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 234/427 (54%), Gaps = 32/427 (7%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E VPG ER++ + SD
Sbjct: 69 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDVERIIEI---SDNRRRD 125
Query: 103 EDGDK-FVSPAQDALFKVHDRVIAEE-------LRGDEDSD------GGHQVTAKLLVPS 148
DG SPAQ+ALF VHDR++ E + +E+ D GG +V +L+V
Sbjct: 126 PDGRMPSFSPAQEALFNVHDRILESEPQFGYGGAQPEEEEDYGGVRPGGGRVVTRLVVSR 185
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQ 207
+GC++GKGG+I++ +R ET IRIL ++ +LP C S+E+VQI GE S VK AL
Sbjct: 186 MHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQIVGELSAVKNALLI 245
Query: 208 IASRLHDNPSRSQHLLASAIS-NSHSSSGSLVGP-TAATPIVGIAPLMGPYGGYKGDT-- 263
++SRL + SQH S SHS P + P G Y+ +
Sbjct: 246 VSSRLRE----SQHRDRSNFQGRSHSPERQFAAAGDDYIPQRRQSSDRFPRGNYRNNNFS 301
Query: 264 --AGDWSRSLYSAPR-DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
+++ + P +++ ++E +++CP I V+G+ I++ ++ E G ++V
Sbjct: 302 SRQSNYAEEAPAVPVGENVYTEELVFQILCPADKIVRVVGESQGILDLLQNEIGVDVRVS 361
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSR 380
T D+ +IT+SS+E +D EA++ +Q + + + LI TTRLLV +
Sbjct: 362 DPVTGSDEQIITISSEEAPDDPFFPAQEALLHIQTQIIDLLPDKDNLI--TTRLLVSSRD 419
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
CL GK GS+ +E+ RLT +++IL +E +P+ AS +D ++QI+GD+ A+DAL+++
Sbjct: 420 SVCLEGKAGSV-SEISRLTGTSVQILAREEIPRCASINDVVIQITGDIRAARDALVELTL 478
Query: 441 RLRANLF 447
LR+++F
Sbjct: 479 LLRSHMF 485
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 115/235 (48%), Gaps = 29/235 (12%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N++ R Q++YA+ P G++ + E+ V++ LCP KI ++G I+
Sbjct: 298 NNFSSR---QSNYAEEAPAV--PVGEN-----VYTEELVFQILCPADKIVRVVGESQGIL 347
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
L+ + +R+ + V GS+E+++T+ S + F PAQ+AL + ++I
Sbjct: 348 DLLQNEIGVDVRVSDPVTGSDEQIITISSEEAPDDPF-------FPAQEALLHIQTQII- 399
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
+L D+D + +T +LLV S C+ GK G V I TG ++IL E +P CA
Sbjct: 400 -DLLPDKD----NLITTRLLVSSRDSVCLEGKAGS-VSEISRLTGTSVQILAREEIPRCA 453
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
+D ++QI+G+ + AL ++ L RS + + +S S GP
Sbjct: 454 SINDVVIQITGDIRAARDALVELTLLL-----RSHMFKELSQKETPPASTSTTGP 503
>gi|7486302|pir||T04533 hypothetical protein F28J12.30 - Arabidopsis thaliana
gi|2832642|emb|CAA16717.1| putative protein [Arabidopsis thaliana]
gi|7268630|emb|CAB78839.1| putative protein [Arabidopsis thaliana]
Length = 846
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 158/500 (31%), Positives = 261/500 (52%), Gaps = 67/500 (13%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLR 69
KR Q + ++ N++R D+ I E VYR LCPI +G +IG+ G+++ +R
Sbjct: 314 KRKQIQRNNSESNRNQKRRISHDK---INRDELVVYRILCPIDVVGGVIGKSGKVINAIR 370
Query: 70 IDTKSKIRIGETVPGSEERVVTVYSA----SDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
+TK+KI++ + + G +RV+T+Y + +E + ++ + AQDAL KV+D ++A
Sbjct: 371 HNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVA 430
Query: 126 --EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLP 182
EE + D +LLVP Q +IGK G+ ++ IR T A ++++ KD P
Sbjct: 431 SDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDP 490
Query: 183 S--CALRSDELVQISGEASVVKKALCQIASRLHD-NP-------SRSQHLLASAI----- 227
S CA+ D +V ISGE VK+AL +++ ++ NP S SQ + A+++
Sbjct: 491 SHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVIVPSD 550
Query: 228 -SNS-------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD-- 277
SNS +S+ ++ A P A + + GY A S P
Sbjct: 551 LSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHG 610
Query: 278 ---DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE-GDD-CLIT 332
S+E +++CP+ NI VIGKGG+ I +IR+ SG+ I+V+ S T+ GDD C+I
Sbjct: 611 FGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVII 670
Query: 333 VSSKEFF--------------EDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPT 378
V++ E +D S +EAV+ LQ +++ + + +LLV +
Sbjct: 671 VTATEILFCCLSTPFVFMQSPDDMKSMAVEAVLLLQEYINDEDAENVKM-----QLLVSS 725
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
IGC+IGK GS+I E+R+ T ANI I + D++V++SG++ +DALIQ+
Sbjct: 726 KVIGCVIGKSGSVINEIRKRTNANICIS--------KGKKDDLVEVSGEVSSVRDALIQI 777
Query: 439 MTRLRANLFDREGAVSTFVP 458
+ RLR ++ + +V+T P
Sbjct: 778 VLRLREDVLGDKDSVATRKP 797
>gi|145347410|ref|XP_001418160.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578389|gb|ABO96453.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 651
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 155/472 (32%), Positives = 238/472 (50%), Gaps = 72/472 (15%)
Query: 11 RSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRI 70
RS + +HG N G+ RD + YR LCP +IG +IG+ G ++K R
Sbjct: 37 RSGERRHRGEHGSN-----GEFRDASV------RYRLLCPTTRIGRVIGKEGRVIKATRA 85
Query: 71 DTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEE--- 127
+T +++++ T G++ERV+ V S D T EDG+ + A+ ALF++ D + EE
Sbjct: 86 ETGARVKVAPTTRGADERVILVASGDDLTVG-EDGEGMTT-AEVALFRIFDTITGEEGVT 143
Query: 128 -----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
+ G +LLVP Q+G +IGKGG ++ IR+ +GA +R++
Sbjct: 144 AARGGEGEGEGEASGGSTRGASTPICRLLVPRVQVGSLIGKGGTVISAIRASSGATVRVM 203
Query: 177 KDEHLPSCALRSDELVQISGEA--------------SVVKKALCQIASRLHDNPSRSQHL 222
LP+CA + DEL+QI+ + + VK AL IA L + PS++
Sbjct: 204 PANMLPACASQGDELLQITAPSRDADGAERDQKLSMASVKNALRMIAKHLREYPSKN--- 260
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS- 281
A+ SN ++G A P+ G + A + + + R +L+
Sbjct: 261 -AATESNRSPFEAFMIGNKTA-----------PHAGVESPGAKNGG---HMSTRMNLNGV 305
Query: 282 -----KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
E + RL+CPV+ G VIG+ G +I QIR ++GA +KV ++ +I VSS
Sbjct: 306 YVPGGTEITFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVCEQVNGAEERIICVSSS 365
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ D L+ + A V L +E I RLLV TS+IGCLIGKGGSII ++R
Sbjct: 366 D---DGLAPMLAAQVALFRVYRCIVESAGNEIPLPFRLLVQTSQIGCLIGKGGSIIKQIR 422
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL-IQVMT-RLRANL 446
T A +R+LP E LP A+ DDE+++I G AL I++++ RLR N+
Sbjct: 423 NETGATVRVLPSEALPSCAN-DDELLEI-GQWPADACALGIRIVSGRLRGNI 472
>gi|356509231|ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 644
Score = 205 bits (522), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 143/435 (32%), Positives = 232/435 (53%), Gaps = 41/435 (9%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E +PG EER++ + SD
Sbjct: 61 TSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEI---SDTRRRD 117
Query: 103 EDGDK-FVSPAQDALFKVHDRVIAEE---------LRGDEDSDGGHQVTAKLLVPSDQIG 152
+G SPAQ+AL +H+R++ + G ++ +L+V +G
Sbjct: 118 PEGRMPSFSPAQEALLLIHERILESDAAFGVAEEDEEYGGRGGGRDRIATRLVVSRMHVG 177
Query: 153 CVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
C++GKGG+I++ +R ET QIRIL +D +LP C S+E+VQ+ G + VK AL I+SR
Sbjct: 178 CLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGNVNAVKNALVIISSR 237
Query: 212 LHDNPSRSQHLLASAISNSHSSSGSLVGP-TAATPIVGI----APLMGPYGGYKGDTAG- 265
L + SQH S S P P V + + G G +G
Sbjct: 238 LRE----SQHRDRSHFHGRVHSPERFFSPDDDYVPHVTSGSRRSSVDGASFGSRGSNTNS 293
Query: 266 --------DWSRSLYSAPRDD----LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
+++ +AP D +E R++CP+ + +IG+ I+ ++ E
Sbjct: 294 RNNNHPSLNYAMEPGAAPVVDDAQGFYGEELVFRILCPIEKVDRIIGESEGIVEFLQNEV 353
Query: 314 GAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI-ERDSGLISFTT 372
G +KV D+ +I ++S+E +D L EA++ +Q R + + ++D+ + TT
Sbjct: 354 GVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEALLHVQTRIVDLVLDKDN---TITT 410
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
RL+VP+S I CL GK S ++E+RRLT ANI+ILP++ LP ++ DE+VQI G++ A+
Sbjct: 411 RLVVPSSEIECLDGKDVS-LSEIRRLTGANIQILPRDELPLCVAKTDELVQIVGEIKAAR 469
Query: 433 DALIQVMTRLRANLF 447
DA+++V +RLR+ L+
Sbjct: 470 DAVVEVTSRLRSYLY 484
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 146/301 (48%), Gaps = 40/301 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ V+R LCPI K+ IIG IV+ L+ + +++ + V GS+E+++ + S
Sbjct: 322 EELVFRILCPIEKVDRIIGESEGIVEFLQNEVGVDVKVTDPVGGSDEQIIIITSE----- 376
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL V R++ +L D+D + +T +L+VPS +I C+ GK
Sbjct: 377 --EGPDDELFPAQEALLHVQTRIV--DLVLDKD----NTITTRLVVPSSEIECLDGKDVS 428
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HDN 215
+ + IR TGA I+IL + LP C ++DELVQI GE + A+ ++ SRL D
Sbjct: 429 LSE-IRRLTGANIQILPRDELPLCVAKTDELVQIVGEIKAARDAVVEVTSRLRSYLYRDF 487
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATP-------IVGIAPLMGPYGGYKGDTAGDWS 268
R L + + + +SS + + P TP V A GG +T
Sbjct: 488 FQRDTVPLPAPLPGAAASSSNNIVPVTETPTTYQNLQTVAAALPSKETGGSSTETG---- 543
Query: 269 RSLYSAPRDDLSS----------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
+ S RDDL S +L +V P + ++ K + + QI + SGA +
Sbjct: 544 KQKESDRRDDLLSGLNRIAVPLVTRSTLEVVLPEYAVPKLVAKSKSKLAQISELSGANVT 603
Query: 319 V 319
+
Sbjct: 604 L 604
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/263 (33%), Positives = 127/263 (48%), Gaps = 43/263 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK-----EFF 339
S R++C GGVIGK G+II IRQ +GA I V ++ +I +S E
Sbjct: 62 SYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERIIEISDTRRRDPEGR 121
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL----------------ISFTTRLLVPTSRIGC 383
+ S EA++ + R +E D+ TRL+V +GC
Sbjct: 122 MPSFSPAQEALLLIHERI---LESDAAFGVAEEDEEYGGRGGGRDRIATRLVVSRMHVGC 178
Query: 384 LIGKGGSIITEMRRLTKANIRILPKE-NLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
L+GKGG II +MR TK IRILP++ NLP+ S +E+VQ+ G+++ K+AL+ + +RL
Sbjct: 179 LLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGNVNAVKNALVIISSRL 238
Query: 443 RANLF-DR---EGAVST----FVPVLPYIPVSENGS-----DGLNYESRDSKRHGRGP-- 487
R + DR G V + F P Y+P +GS DG ++ SR S + R
Sbjct: 239 RESQHRDRSHFHGRVHSPERFFSPDDDYVPHVTSGSRRSSVDGASFGSRGSNTNSRNNNH 298
Query: 488 PYGGYGSSDLAA---GDSYGSYG 507
P Y AA D+ G YG
Sbjct: 299 PSLNYAMEPGAAPVVDDAQGFYG 321
>gi|308804768|ref|XP_003079696.1| putative KH domain containing protein (ISS) [Ostreococcus tauri]
gi|116058152|emb|CAL53341.1| putative KH domain containing protein (ISS), partial [Ostreococcus
tauri]
Length = 709
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 156/452 (34%), Positives = 232/452 (51%), Gaps = 70/452 (15%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ +IG +IG+ G ++K LR +T +++++ T G++ERVV V AS E +D
Sbjct: 72 FRLLCPVARIGRVIGKEGRVIKALRAETGARVKVAPTTRGADERVVLV--ASGEELMMDD 129
Query: 105 GDKF---VSPAQDALFKVHDRVIAEE---LRGDEDS---------------------DGG 137
GD V+ A+ ALF++ D V +E L G D +GG
Sbjct: 130 GDGSDVPVTTAERALFRIFDTVASESGGALDGTRDGTSSESGSGVPESSSTGGERSMNGG 189
Query: 138 HQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
V +LLVP Q+G +IGKGG ++ IR+ +GA +R++ LP+CA R DEL+QI+
Sbjct: 190 RAVPICRLLVPRAQVGSLIGKGGAVISAIRASSGATVRLMPATMLPTCASRGDELLQITA 249
Query: 197 EA------------SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAAT 244
+ VK AL +A L + P++ ++S S P A
Sbjct: 250 PVRDTDGNDVDLALASVKSALRMVAKNLREYPTK------------MATSESFRSPLEAF 297
Query: 245 PIVGIAPLMGPYGGYKGDTAGDWSRSL-YSAPRDDLSS------KEFSLRLVCPVANIGG 297
++GI P G S + + R +L+ E RL+CPV+ G
Sbjct: 298 -MLGIKPGANADGDGGNGAGIAGGSSGGHMSTRMNLNGVYVPGGTEIMFRLLCPVSKTGS 356
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
VIG+ G +I QIR E+GA +KV ++ +I VSS + D L+ + A V L R
Sbjct: 357 VIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSSND---DGLAPMLAAQVALF-RV 412
Query: 358 SEKIERDSGL-ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIAS 416
I SG + RLLV TS+IGCLIGKGGSII ++R T A +R+LP + LP A+
Sbjct: 413 YRCIVDSSGSDVPLPFRLLVQTSQIGCLIGKGGSIIRQIRNETGATVRVLPSDALPACAN 472
Query: 417 EDDEMVQISGDLDLAKDAL-IQVMT-RLRANL 446
DDE+++I G AL I++++ RLR N+
Sbjct: 473 ADDELLEI-GQWPADACALGIRIVSGRLRGNM 503
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/291 (33%), Positives = 158/291 (54%), Gaps = 23/291 (7%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA 95
++ G + ++R LCP+ K GS+IGR GE+++Q+R +T +K+++ E + +EER++ V S
Sbjct: 336 YVPGGTEIMFRLLCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSSN 395
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-QVTAKLLVPSDQIGCV 154
+DG + AQ ALF+V+ ++ DS G + +LLV + QIGC+
Sbjct: 396 -------DDGLAPMLAAQVALFRVYRCIV--------DSSGSDVPLPFRLLVQTSQIGCL 440
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI-SGEASVVKKALCQIASRLH 213
IGKGG I++ IR+ETGA +R+L + LP+CA DEL++I A + ++ RL
Sbjct: 441 IGKGGSIIRQIRNETGATVRVLPSDALPACANADDELLEIGQWPADACALGIRIVSGRLR 500
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
N + SN +S+S + TP + + LM YG Y+ + SL
Sbjct: 501 GNMRHKAAERLNVESNVYSASMTPTMAVQDTPTLQQSELM-MYGMTAYETEPVDTALASL 559
Query: 272 -YSAPRDDLS--SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
SAP ++ + S+ + +IG V+G+GG I+ RQ SGA IK+
Sbjct: 560 SLSAPPVEIPGVTTVNSVHMTISSQHIGSVLGRGGCNISIARQVSGARIKL 610
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 96/204 (47%), Gaps = 41/204 (20%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-----KDEHLPSCALRSDELVQI 194
V +LL P +IG VIGK G++++ +R+ETGA++++ DE + A +EL+
Sbjct: 70 VQFRLLCPVARIGRVIGKEGRVIKALRAETGARVKVAPTTRGADERVVLVA-SGEELMMD 128
Query: 195 SGEASVVKKALCQIA-SRLHDN-PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
G+ S V + A R+ D S S L + S SGS V +++T
Sbjct: 129 DGDGSDVPVTTAERALFRIFDTVASESGGALDGTRDGTSSESGSGVPESSST-------- 180
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
GG + G + P RL+ P A +G +IGKGGA+I+ IR
Sbjct: 181 ----GGERSMNGG------RAVP---------ICRLLVPRAQVGSLIGKGGAVISAIRAS 221
Query: 313 SGAAIK------VDSSSTEGDDCL 330
SGA ++ + + ++ GD+ L
Sbjct: 222 SGATVRLMPATMLPTCASRGDELL 245
>gi|357159179|ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 123/347 (35%), Positives = 196/347 (56%), Gaps = 29/347 (8%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQ------VTAKLLVPSDQIGCVIGKGGQIVQNI 165
A A +V +RV+ + GD+ +G + V ++L Q+GCV+GKGG+ V+ +
Sbjct: 78 APAAAVRVWERVVGHRVGGDDAGEGEEEKEVTGVVGCRMLAAGGQVGCVLGKGGKTVERM 137
Query: 166 RSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
R E+GAQIR+ ++ + +P CAL+ DEL+ ISG S +KAL +++ L DNP
Sbjct: 138 RQESGAQIRVFRNKDQVPPCALQGDELIHISGSFSAARKALLLVSTCLQDNPR------- 190
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSLYSA------PR 276
+ S+ S+G GP + VG P + + Y D+ +S+ PR
Sbjct: 191 --LETSNFSTGRSFGPPGSG--VGCPPGVDSHSQRSYLPPHIPDYHARNFSSNVAAPGPR 246
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+ +E R++C +GG+IGKGGA I ++ ++GA++KV + + D+ +I +S++
Sbjct: 247 FFIE-QEIVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIVISAR 305
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
E E S +AV+R+ R SE S + RLLVP+ IGCL+GKGGSII EMR
Sbjct: 306 ENSEMMHSPAQDAVLRVYSRISEASMDKSSAVP--ARLLVPSQHIGCLLGKGGSIIAEMR 363
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+T A+IRI E +P+ A +DE+VQ++G+ +DAL+ + R+R
Sbjct: 364 NVTGASIRIFGNEQIPRCAQRNDELVQVTGNFQSIQDALLHITGRIR 410
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/212 (36%), Positives = 121/212 (57%), Gaps = 20/212 (9%)
Query: 9 GKRSHSQTDY-ADHGP--NKRRYTGD---DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G SHSQ Y H P + R ++ + +F I ++ V+R +C +G IIG+GG
Sbjct: 214 GVDSHSQRSYLPPHIPDYHARNFSSNVAAPGPRFFIE-QEIVFRMICLNEMVGGIIGKGG 272
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
++ L+ DT + +++ + V S+ERV+ + +A E+ + SPAQDA+ +V+ R
Sbjct: 273 ATIRALQSDTGASVKVIDAVADSDERVIVI-------SARENSEMMHSPAQDAVLRVYSR 325
Query: 123 VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP 182
+ + D V A+LLVPS IGC++GKGG I+ +R+ TGA IRI +E +P
Sbjct: 326 I------SEASMDKSSAVPARLLVPSQHIGCLLGKGGSIIAEMRNVTGASIRIFGNEQIP 379
Query: 183 SCALRSDELVQISGEASVVKKALCQIASRLHD 214
CA R+DELVQ++G ++ AL I R+ D
Sbjct: 380 RCAQRNDELVQVTGNFQSIQDALLHITGRIRD 411
>gi|224141139|ref|XP_002323932.1| predicted protein [Populus trichocarpa]
gi|222866934|gb|EEF04065.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 151/448 (33%), Positives = 231/448 (51%), Gaps = 46/448 (10%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE- 103
+R LC +IG +IG+ G I+K L+ T +K+RI + S +RV+TV ++
Sbjct: 38 FRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQSAVVFS 97
Query: 104 --DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
+ VS Q+AL +V +R++ E+ + DS V+ ++L +G VIGKGG++
Sbjct: 98 RIESAVEVSKGQEALVRVFERIL--EVAAESDSVADGVVSCRMLAEVSSVGAVIGKGGKV 155
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ IR + G +I++L D+ LP CA ++E+++I G+ S VKK L ++ L D Q
Sbjct: 156 VEKIRKDCGCRIKVLVDK-LPDCAASNEEMIEIEGDVSAVKKGLVAVSRCLQD----CQP 210
Query: 222 LLASAISNS---------------------HSS------SGSLVGPTAATPIVGIAPLMG 254
+ + ++NS HS+ S V PT +G+ +
Sbjct: 211 VDKTRVTNSKPAEAVSRVSLSDVRVEIHPRHSAVLPTIAQNSSVLPTIPQHSLGLPTIPK 270
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
Y S D ++ R++C IGGVIGKGG I+ ++ E+G
Sbjct: 271 SSINYASRVHPLSLESDRVVTPDTNIPQQLVFRILCTTDRIGGVIGKGGNIVRALQNETG 330
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK-IER--DSGL---I 368
AAI V + +E D+ LITV++ E E SA + +V + R E IE+ D G
Sbjct: 331 AAISVGPTVSECDERLITVTASENPESRYSAAQKTIVLVFSRAVESGIEKGLDPGSSRGS 390
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP-KENLPKIASEDDEMVQISGD 427
T RL+V S++GCL+GKGG+II+EMR+ T +IRI+ + PK E D +V+ISGD
Sbjct: 391 PVTARLVVSPSQVGCLLGKGGTIISEMRKATSTSIRIIVGDQRNPKCVPETDHVVEISGD 450
Query: 428 LDLAKDALIQVMTRLRANLFDREGAVST 455
KDA+ V RLR NLF G +ST
Sbjct: 451 FVNVKDAIYHVTGRLRDNLF--SGMLST 476
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 99/179 (55%), Gaps = 10/179 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P+ V+R LC +IG +IG+GG IV+ L+ +T + I +G TV +ER++TV
Sbjct: 297 PQQLVFRILCTTDRIGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITV------- 349
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRG--DEDSDGGHQVTAKLLVPSDQIGCVIGK 157
A E+ + S AQ + V R + + D S G VTA+L+V Q+GC++GK
Sbjct: 350 TASENPESRYSAAQKTIVLVFSRAVESGIEKGLDPGSSRGSPVTARLVVSPSQVGCLLGK 409
Query: 158 GGQIVQNIRSETGAQIRILK-DEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GG I+ +R T IRI+ D+ P C +D +V+ISG+ VK A+ + RL DN
Sbjct: 410 GGTIISEMRKATSTSIRIIVGDQRNPKCVPETDHVVEISGDFVNVKDAIYHVTGRLRDN 468
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 97/174 (55%), Gaps = 17/174 (9%)
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV----- 333
+ S S RL+C + IGGVIGK G II ++Q++GA ++++ + ++ D +ITV
Sbjct: 31 VPSGHVSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPIT 90
Query: 334 SSKEFFEDTLSAT-----IEAVVRLQPRCSE-KIERDS---GLISFTTRLLVPTSRIGCL 384
S F SA EA+VR+ R E E DS G++S R+L S +G +
Sbjct: 91 QSAVVFSRIESAVEVSKGQEALVRVFERILEVAAESDSVADGVVS--CRMLAEVSSVGAV 148
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
IGKGG ++ ++R+ I++L + LP A+ ++EM++I GD+ K L+ V
Sbjct: 149 IGKGGKVVEKIRKDCGCRIKVL-VDKLPDCAASNEEMIEIEGDVSAVKKGLVAV 201
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 47/183 (25%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
GH V+ +LL + +IG VIGK G I++ ++ +TGA++RI E PS + D ++ + G
Sbjct: 34 GH-VSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRI---EDAPSDS--PDRVITVIG 87
Query: 197 EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY 256
+ +I S + S+ Q L I+ +A
Sbjct: 88 PITQSAVVFSRIESAVEV--SKGQEALVRVFER----------------ILEVA------ 123
Query: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
A D ++ S R++ V+++G VIGKGG ++ +IR++ G
Sbjct: 124 -----------------AESDSVADGVVSCRMLAEVSSVGAVIGKGGKVVEKIRKDCGCR 166
Query: 317 IKV 319
IKV
Sbjct: 167 IKV 169
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 200 bits (508), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/360 (36%), Positives = 195/360 (54%), Gaps = 27/360 (7%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEA 198
V ++L Q+GCV+GKGG+ V+ +R E+GAQIR+ ++ E +P CAL+ DEL+ ISG
Sbjct: 110 VGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGSF 169
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG 258
S +KAL +++ L DNP S+ SG GP + VG P + P+
Sbjct: 170 SAARKALLLVSTCLQDNPRPD---------TSNFPSGRPFGPPGSG--VGCPPGVDPHSQ 218
Query: 259 ---YKGDTAGDWSRSLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
D+ +S+ PR +E R++C +GGVIGKGG+ I +
Sbjct: 219 RSYLPPPHVPDYHARNFSSNGAAPGPRF-FVEQEIVFRMICLNDMVGGVIGKGGSTIRAL 277
Query: 310 RQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS 369
+ E+GA++KV + D+ +I +S++E E S + +A++R+ + SE S S
Sbjct: 278 QSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVYSKISEASMDKSS--S 335
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
RLLVP IGCL+GKGGSII EMR+LT A+IRI E +P+ A +DE+VQ++G
Sbjct: 336 VPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQ 395
Query: 430 LAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPY 489
+DAL+ + R+R + + S +P PY PV N S + + S G PPY
Sbjct: 396 SIQDALLHITGRIRDLIIPPKPHPSGGMP--PYPPVG-NPSHHQSRQEAPSHHSGGMPPY 452
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 104/174 (59%), Gaps = 13/174 (7%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ V+R +C +G +IG+GG ++ L+ +T + +++ + V S+ER++ + +
Sbjct: 250 QEIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVI-------S 302
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E+ + SP+QDAL +V+ ++ + D V A+LLVP+ IGC++GKGG
Sbjct: 303 ARENSEMMRSPSQDALLRVYSKI------SEASMDKSSSVPARLLVPAQHIGCLLGKGGS 356
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
I+ +R TGA IRI +E +P CA R+DELVQ++G ++ AL I R+ D
Sbjct: 357 IIAEMRKLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 410
>gi|147832545|emb|CAN68300.1| hypothetical protein VITISV_009906 [Vitis vinifera]
Length = 408
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/138 (67%), Positives = 116/138 (84%), Gaps = 1/138 (0%)
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
EE+ G EDS+ +QVT +LLVPS+QIGCVIGKGGQI+Q+IRSE+GAQIRILKD+HLPSC+
Sbjct: 270 EEVHG-EDSEEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCS 328
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATP 245
L S+EL+QIS E +V+K L QIASRLHDNPSRSQHL + +SSSGSL+G T+ P
Sbjct: 329 LSSNELIQISREPFIVRKILYQIASRLHDNPSRSQHLFVYVVPIGYSSSGSLMGLTSGAP 388
Query: 246 IVGIAPLMGPYGGYKGDT 263
I+G+APL+G YGGY+GD+
Sbjct: 389 IIGLAPLVGTYGGYRGDS 406
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T RLLVP+++IGC+IGKGG II +R + A IRIL ++LP + +E++QIS + +
Sbjct: 284 TVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCSLSSNELIQISREPFI 343
Query: 431 AKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYG 490
+ L Q+ +RL N R + +V +P+ + S L + + G P G
Sbjct: 344 VRKILYQIASRLHDNP-SRSQHLFVYV-----VPIGYSSSGSLMGLTSGAPIIGLAPLVG 397
Query: 491 GYG 493
YG
Sbjct: 398 TYG 400
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D + + ++RL+ P IG VIGKGG II IR ESGA I++
Sbjct: 276 DSEEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRI 318
>gi|125555220|gb|EAZ00826.1| hypothetical protein OsI_22856 [Oryza sativa Indica Group]
Length = 693
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 137/435 (31%), Positives = 225/435 (51%), Gaps = 50/435 (11%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T +R LCP K+ G + ++R DT + + I PG RV+ SD
Sbjct: 85 TSFRILCPQSKV---YGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVI---ETSDGARRE 138
Query: 103 EDG-DKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGH---------QVTAKLLVPSDQI 151
DG SPAQ+AL VH R++ E GDED + G +VT +L+VP +
Sbjct: 139 ADGRPPSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHV 198
Query: 152 GCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
GC++GKGG+I++ +R+ET IRIL +D+H P C S+E+VQ+ GE + VKKA+ I+
Sbjct: 199 GCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISD 258
Query: 211 RLHDNPSRSQHLLASAISNSHSS--------SGSLVGPTAATP------IVGIAPLMGPY 256
RL ++ R + +++ G+ P P I + P
Sbjct: 259 RLKESLHRDRGPFRGRMNSPEHRFPQEDEYYGGAQQMPAYEEPYGRPDQIRNNTSMEPP- 317
Query: 257 GGYKGDTAG----DWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
GY+ D+ G D + L+ DD+ R++CP + ++G ++ ++++
Sbjct: 318 -GYEFDSNGGKINDHTEILF----DDI-----IFRILCPSDKVNSLVGTRDGLLEMLQED 367
Query: 313 SGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT 372
G I++ S D+ +I ++S+E + L EA++ LQ + +I TT
Sbjct: 368 VGVDIRLTDSLDGSDERIIIITSREGPDHELFPAQEALLHLQTHIVDLGPDKDNII--TT 425
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
RLLVP+S I C G+ GS +++++R T AN++ILP++ LP A E DE++QI G++ A+
Sbjct: 426 RLLVPSSEIACFEGRDGS-LSDIQRQTSANVQILPRQALPSCALESDELIQIVGEIRAAR 484
Query: 433 DALIQVMTRLRANLF 447
DAL+Q+ +LR+ +
Sbjct: 485 DALVQITAKLRSYFY 499
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 163/341 (47%), Gaps = 36/341 (10%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R LCP K+ S++G +++ L+ D IR+ +++ GS+ER++ + S
Sbjct: 337 DDIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSR----- 391
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL + ++ D D + +T +LLVPS +I C G+ G
Sbjct: 392 --EGPDHELFPAQEALLHLQTHIV------DLGPDKDNIITTRLLVPSSEIACFEGRDGS 443
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HDN 215
+ +I+ +T A ++IL + LPSCAL SDEL+QI GE + AL QI ++L +
Sbjct: 444 L-SDIQRQTSANVQILPRQALPSCALESDELIQIVGEIRAARDALVQITAKLRSYFYREI 502
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAAT--PIVGIAPLMGPYGGYKGDTAGDWSRSLY- 272
P +Q + + + GS GP + P+ +K D+ G + S
Sbjct: 503 PGPNQLGNITVHGSISPAKGSPRGPYQGSDIPMPSYQQAQHVPASWK-DSGGGANMSFEQ 561
Query: 273 -SAPRDDL---SSKEF--------SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
S DD+ ++K F +L +V P + + + + G+ + QI + SGA + +
Sbjct: 562 GSNINDDMRQSAAKRFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLA 621
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
+ + ++ +S D + ++ + L + EK
Sbjct: 622 DERPDAIEKVVRISGTPEQADKAQSLLQGFI-LSSKVKEKF 661
>gi|449448150|ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 192 bits (487), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 146/482 (30%), Positives = 226/482 (46%), Gaps = 84/482 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P DT++R LCP K+ SI+ + LR ++I + E +P EE V+ + + S
Sbjct: 65 PSDTLFRLLCPASKVSSIL-------RHLRDIPGARIHVDEPLPSCEECVLVILAGSPSK 117
Query: 100 NAFEDGDKFVSPAQDALFKVHD-------------------------RVIAEELRGDEDS 134
A +P D F+ HD R +R +EDS
Sbjct: 118 PAH------TNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDS 171
Query: 135 -------------------DGGHQ---VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
GG V +LL PS Q+G V+G+GG+ V+ IR E+ A
Sbjct: 172 GENQEIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAH 231
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHS 232
++I + P+CA DEL+QISG S V KAL ++S L D+P + +S+S
Sbjct: 232 VKIFPKDQNPACASPQDELIQISGNFSAVMKALSSVSSCLQDSPR---------VDSSNS 282
Query: 233 SSGSLVGPTAATPIVGIA-PLMGPYGGYKGDTAGDWSRSLYSA----------PRDDLSS 281
SS +GPT+ + + P Y D+ YS+ PR +
Sbjct: 283 SSTKSLGPTSHASSMSVQDEEPSPRRRYGSHHNADYRSRSYSSIPGHENAGAGPRAAM-E 341
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
++ RL+C +G +IGKGG ++ ++ E+GA+IK+ + + D+ L+ +S++E E
Sbjct: 342 EDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKI-VDTPDLDERLVVISARETLEQ 400
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
T S EAV+R R +E I + G + RLLV +IG L+G+GG II +MRR T
Sbjct: 401 TYSPAQEAVIRAHCRIAE-IGYEPG-AAVVARLLVHGQQIGYLVGRGGHIINDMRRGTGT 458
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
+I+I P++ + DE+VQ+ G+L +DAL + R+R F V F P
Sbjct: 459 SIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFFPMRPHVPNFNNHPP 518
Query: 462 YI 463
Y+
Sbjct: 519 YL 520
>gi|54290950|dbj|BAD61631.1| putative HEN4 [Oryza sativa Japonica Group]
Length = 662
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 137/438 (31%), Positives = 223/438 (50%), Gaps = 56/438 (12%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T +R LCP K+ G + ++R DT + + I PG RV+ SD
Sbjct: 85 TSFRILCPQSKV---YGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVI---ETSDGARRE 138
Query: 103 EDG-DKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGH---------QVTAKLLVPSDQI 151
DG SPAQ+AL VH R++ E GDED + G +VT +L+VP +
Sbjct: 139 ADGRPPSFSPAQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKVTTRLIVPRLHV 198
Query: 152 GCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
GC++GKGG+I++ +R+ET IRIL +D+H P C S+E+VQ+ GE + VKKA+ I+
Sbjct: 199 GCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGNCVKKAVAIISD 258
Query: 211 RLHDNPSRSQHLL---ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG---------- 257
RL ++ R + ++ + G P PYG
Sbjct: 259 RLKESLHRDRGPFRGRMNSPEHRFPQEDEYYGGAQQMPA-----YEEPYGRPDQIRNNTS 313
Query: 258 ----GYKGDTAG----DWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
GY+ D+ G D + L+ DD+ R++CP + ++G ++ +
Sbjct: 314 MELPGYEFDSNGGKINDHTEILF----DDI-----IFRILCPSDKVNSLVGTRDGLLEML 364
Query: 310 RQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS 369
+++ G I++ S D+ +I ++S+E + L EA++ LQ + +I
Sbjct: 365 QEDVGVDIRLTDSLDGSDERIIIITSREGPDHELFPAQEALLHLQTHIVDLGPDKDNII- 423
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
TTRLLVP+S I C G+ GS +++++R T AN++ILP++ LP A E DE++QI G++
Sbjct: 424 -TTRLLVPSSEIACFEGRDGS-LSDIQRQTSANVQILPRQALPSCALESDELIQIVGEIR 481
Query: 430 LAKDALIQVMTRLRANLF 447
A+DAL+Q+ +LR+ +
Sbjct: 482 AARDALVQITAKLRSYFY 499
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 154/314 (49%), Gaps = 35/314 (11%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R LCP K+ S++G +++ L+ D IR+ +++ GS+ER++ + S
Sbjct: 337 DDIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSR----- 391
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL + ++ D D + +T +LLVPS +I C G+ G
Sbjct: 392 --EGPDHELFPAQEALLHLQTHIV------DLGPDKDNIITTRLLVPSSEIACFEGRDGS 443
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HDN 215
+ +I+ +T A ++IL + LPSCAL SDEL+QI GE + AL QI ++L +
Sbjct: 444 L-SDIQRQTSANVQILPRQALPSCALESDELIQIVGEIRAARDALVQITAKLRSYFYREI 502
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAAT--PIVGIAPLMGPYGGYKGDTAGDWSRSLY- 272
P +Q + + + GS GP + P+ +K D+ G + S
Sbjct: 503 PGPNQLGNITVHGSISPAKGSPRGPYQGSDIPMPSYQQAQHVPASWK-DSGGGANMSFEQ 561
Query: 273 -SAPRDDL---SSKEF--------SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
S DD+ ++K F +L +V P + + + + G+ + QI + SGA + +
Sbjct: 562 GSNINDDMRQSAAKRFAVPLVTRSTLEVVIPKSAVASLTMRAGSKLAQISEMSGATVTLA 621
Query: 321 SSSTEGDDCLITVS 334
+ + ++ +S
Sbjct: 622 DERPDAIEKVVRIS 635
>gi|226529077|ref|NP_001146029.1| hypothetical protein [Zea mays]
gi|219885375|gb|ACL53062.1| unknown [Zea mays]
gi|414589866|tpg|DAA40437.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 624
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 189/365 (51%), Gaps = 35/365 (9%)
Query: 115 ALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
A + + V+ + GDE G + V ++L Q+GCV+GKGG+ V+ +R
Sbjct: 77 AAVRAWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQ 136
Query: 168 ETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
E GAQIR+ ++ E LP A DEL+ ISG S V+KAL +++ L DNP H +
Sbjct: 137 ECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDNPRPDTHNIPIG 196
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSLYSA------PRDD 278
SG+ G P M P+ Y D+ Y + PR
Sbjct: 197 RPFGLPGSGT-----------GCPPGMDPHSQRSYLPPHIPDYHTRNYPSNAGPPGPRF- 244
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+E R++ +G +IGKGG+ I ++ E+GA IK+ + D+ ++ ++++E
Sbjct: 245 FFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITAREN 304
Query: 339 FEDTLSATIEAVVRLQPRCSE-KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
+ S +AVVR+ R SE I+R S RLLVP+ IGCL+GKGGSII+EMR+
Sbjct: 305 SDMLHSPAQDAVVRVYSRISEASIDRSS---HTPARLLVPSQHIGCLLGKGGSIISEMRK 361
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE---GAVS 454
+T ANIRI E +P+ A +DEMVQ++G +DAL+ + R+R + + G +
Sbjct: 362 ITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMP 421
Query: 455 TFVPV 459
+ PV
Sbjct: 422 PYPPV 426
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 20/212 (9%)
Query: 9 GKRSHSQTDY-ADHGP--NKRRY---TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G HSQ Y H P + R Y G +F ++ V+R + +GSIIG+GG
Sbjct: 211 GMDPHSQRSYLPPHIPDYHTRNYPSNAGPPGPRFFFE-QEIVFRMIILNEMVGSIIGKGG 269
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
++ L+ +T + I+I E V S+ERVV + A E+ D SPAQDA+ +V+ R
Sbjct: 270 STIRALQSETGACIKILEPVADSDERVVAI-------TARENSDMLHSPAQDAVVRVYSR 322
Query: 123 VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP 182
+ + D A+LLVPS IGC++GKGG I+ +R TGA IRI +E +P
Sbjct: 323 I------SEASIDRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIP 376
Query: 183 SCALRSDELVQISGEASVVKKALCQIASRLHD 214
CA R+DE+VQ++G ++ AL I R+ D
Sbjct: 377 RCAQRNDEMVQVTGSFQSIQDALLHITGRIRD 408
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 32/171 (18%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
LRL+CP + + A + R + VD GD+ ++ +S DT +A
Sbjct: 36 LRLLCPSSRV--------ATLRPSRD-----LHVDHPPV-GDEAVLVISGP----DTPAA 77
Query: 346 TIEAVVRLQPRCSEKIERDSGL----------ISFTTRLLVPTSRIGCLIGKGGSIITEM 395
+ A + ++E D + + R+L ++GC++GKGG + M
Sbjct: 78 AVRAWEHV---VGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERM 134
Query: 396 RRLTKANIRIL-PKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
R+ A IR+ +E LP A DE++ ISG + AL+ V T L+ N
Sbjct: 135 RQECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDN 185
>gi|414589867|tpg|DAA40438.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 640
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 124/365 (33%), Positives = 189/365 (51%), Gaps = 35/365 (9%)
Query: 115 ALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
A + + V+ + GDE G + V ++L Q+GCV+GKGG+ V+ +R
Sbjct: 77 AAVRAWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERMRQ 136
Query: 168 ETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
E GAQIR+ ++ E LP A DEL+ ISG S V+KAL +++ L DNP H +
Sbjct: 137 ECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDNPRPDTHNIPIG 196
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSLYSA------PRDD 278
SG+ G P M P+ Y D+ Y + PR
Sbjct: 197 RPFGLPGSGT-----------GCPPGMDPHSQRSYLPPHIPDYHTRNYPSNAGPPGPRF- 244
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+E R++ +G +IGKGG+ I ++ E+GA IK+ + D+ ++ ++++E
Sbjct: 245 FFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAITAREN 304
Query: 339 FEDTLSATIEAVVRLQPRCSE-KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
+ S +AVVR+ R SE I+R S RLLVP+ IGCL+GKGGSII+EMR+
Sbjct: 305 SDMLHSPAQDAVVRVYSRISEASIDRSS---HTPARLLVPSQHIGCLLGKGGSIISEMRK 361
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE---GAVS 454
+T ANIRI E +P+ A +DEMVQ++G +DAL+ + R+R + + G +
Sbjct: 362 ITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMP 421
Query: 455 TFVPV 459
+ PV
Sbjct: 422 PYPPV 426
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 115/212 (54%), Gaps = 20/212 (9%)
Query: 9 GKRSHSQTDY-ADHGP--NKRRY---TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGG 62
G HSQ Y H P + R Y G +F ++ V+R + +GSIIG+GG
Sbjct: 211 GMDPHSQRSYLPPHIPDYHTRNYPSNAGPPGPRFFFE-QEIVFRMIILNEMVGSIIGKGG 269
Query: 63 EIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
++ L+ +T + I+I E V S+ERVV + A E+ D SPAQDA+ +V+ R
Sbjct: 270 STIRALQSETGACIKILEPVADSDERVVAI-------TARENSDMLHSPAQDAVVRVYSR 322
Query: 123 VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP 182
+ + D A+LLVPS IGC++GKGG I+ +R TGA IRI +E +P
Sbjct: 323 I------SEASIDRSSHTPARLLVPSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIP 376
Query: 183 SCALRSDELVQISGEASVVKKALCQIASRLHD 214
CA R+DE+VQ++G ++ AL I R+ D
Sbjct: 377 RCAQRNDEMVQVTGSFQSIQDALLHITGRIRD 408
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 76/171 (44%), Gaps = 32/171 (18%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
LRL+CP + + A + R + VD GD+ ++ +S DT +A
Sbjct: 36 LRLLCPSSRV--------ATLRPSRD-----LHVDHPPV-GDEAVLVISGP----DTPAA 77
Query: 346 TIEAVVRLQPRCSEKIERDSGL----------ISFTTRLLVPTSRIGCLIGKGGSIITEM 395
+ A + ++E D + + R+L ++GC++GKGG + M
Sbjct: 78 AVRAWEHV---VGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQVGCVLGKGGKTVERM 134
Query: 396 RRLTKANIRIL-PKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
R+ A IR+ +E LP A DE++ ISG + AL+ V T L+ N
Sbjct: 135 RQECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVSTCLQDN 185
>gi|449492545|ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 145/482 (30%), Positives = 225/482 (46%), Gaps = 84/482 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P DT++R LCP K+ SI+ + LR ++I + E +P EE V+ + + S
Sbjct: 65 PSDTLFRLLCPASKVSSIL-------RHLRDIPGARIHVDEPLPSCEECVLVILAGSPSK 117
Query: 100 NAFEDGDKFVSPAQDALFKVHD-------------------------RVIAEELRGDEDS 134
+P D F+ HD R +R +EDS
Sbjct: 118 ------PTHTNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDS 171
Query: 135 -------------------DGGHQ---VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
GG V +LL PS Q+G V+G+GG+ V+ IR E+ A
Sbjct: 172 GENQEIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAH 231
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHS 232
++I + P+CA DEL+QISG S V KAL ++S L D+P + +S+S
Sbjct: 232 VKIFPKDQNPACASPQDELIQISGNFSAVMKALSSVSSCLQDSPR---------VDSSNS 282
Query: 233 SSGSLVGPTAATPIVGIA-PLMGPYGGYKGDTAGDWSRSLYSA----------PRDDLSS 281
SS +GPT+ + + P Y D+ YS+ PR +
Sbjct: 283 SSTKSLGPTSHASSMSVQDEEPSPRRRYGSHHNADYRSRSYSSIPGHENAGAGPRAAM-E 341
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
++ RL+C +G +IGKGG ++ ++ E+GA+IK+ + + D+ L+ +S++E E
Sbjct: 342 EDVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKI-VDTPDLDERLVVISARETLEQ 400
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
T S EAV+R R +E I + G + RLLV +IG L+G+GG II +MRR T
Sbjct: 401 TYSPAQEAVIRAHCRIAE-IGYEPG-AAVVARLLVHGQQIGYLVGRGGHIINDMRRGTGT 458
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
+I+I P++ + DE+VQ+ G+L +DAL + R+R F V F P
Sbjct: 459 SIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALFHITNRIRDTFFPMRPHVPNFNNHPP 518
Query: 462 YI 463
Y+
Sbjct: 519 YL 520
>gi|356526304|ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
max]
Length = 565
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 132/408 (32%), Positives = 216/408 (52%), Gaps = 67/408 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D V+R +CP K + GG+ K L E + G+EERVV +
Sbjct: 18 DAVFRIVCPAAKTADVAAIGGDGAKILV----------EDLVGAEERVVVIV-------- 59
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
GD+ S AQ AL +V +R + EE + V+ KL+ PS Q+GCV+G+GG+I
Sbjct: 60 ---GDE--SAAQVALIRVLERTMDEETKNS-------TVSCKLVAPSYQVGCVLGRGGKI 107
Query: 162 VQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
V+ IR ++GA IR+L KD+ DE +QI+G VKKA+ +++ LH+N
Sbjct: 108 VEKIRQDSGAHIRVLPKDQ---PPPPPGDEFIQITGNFGAVKKAVLSVSACLHEN----- 159
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
+ + S GS P + G Y ++AG S ++
Sbjct: 160 ----NYGAFKPSGGGSYAPPDHHS-----------RGAYS-ESAGHSSHRMFV------- 196
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
+E +L+C +G +IGKGG+++ ++ E+GA+I++ + + D+ ++ +S++E E
Sbjct: 197 EEEVVFKLLCRHDKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISAQETSE 256
Query: 341 DTLSATIEAVVRLQPRCSE-KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
S EAV+R+ R +E E + +++ +LLV + ++GCL+GKGG +I+EMRR T
Sbjct: 257 QKHSPAQEAVIRVHCRLTEIGFEPSAAVVA---KLLVRSPQVGCLLGKGGLVISEMRRAT 313
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
A+IRI KE + K S+++E+VQ+ G L +DAL + R+R +F
Sbjct: 314 GASIRIFSKEQI-KYISQNEEVVQVIGSLQSVQDALFHITNRIRETIF 360
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 107/174 (61%), Gaps = 14/174 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ V++ LC K+GS+IG+GG +V+ L+ +T + I+I E P S+ERVV + +
Sbjct: 198 EEVVFKLLCRHDKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVI-------S 250
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E ++ SPAQ+A+ +VH R+ E+ G E S V AKLLV S Q+GC++GKGG
Sbjct: 251 AQETSEQKHSPAQEAVIRVHCRLT--EI-GFEPSAA---VVAKLLVRSPQVGCLLGKGGL 304
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
++ +R TGA IRI E + + +++E+VQ+ G V+ AL I +R+ +
Sbjct: 305 VISEMRRATGASIRIFSKEQIKYIS-QNEEVVQVIGSLQSVQDALFHITNRIRE 357
>gi|218202392|gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indica Group]
Length = 617
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/410 (31%), Positives = 203/410 (49%), Gaps = 52/410 (12%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T R LCP + ++ G + L +D P +E V+++ A
Sbjct: 36 TTLRILCPSSRASALRGAS----RDLHVDQP---------PVGDEAVLSISGPDAPAVAV 82
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
++ V RV +E G+E+ + V ++L S Q+GCV+GKGG+ V
Sbjct: 83 RAWERVVG----------HRVGGDEAAGEEEREVPGVVGCRMLAASGQVGCVLGKGGKTV 132
Query: 163 QNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP----- 216
+ +R E+GAQIR+ ++ + LP A DEL+ ISG S V+KAL + + L DNP
Sbjct: 133 ERMRQESGAQIRVFRNRDQLPPWAAPVDELIHISGNFSAVRKALLLVTTCLQDNPRPDAS 192
Query: 217 ---SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ HS G L P M Y A ++S ++ +
Sbjct: 193 NFPPGRFGPPGPVGIDPHSQRGYL------------PPSMPDY------HARNYSSNMAA 234
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+E R++C +G +IGKGG+ I ++ E+GA+IK+ +++ ++ +I +
Sbjct: 235 PGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVI 294
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
S+ E E S +AV+R+ R SE S + T RLLVP+ IGCL+GKGGSII
Sbjct: 295 SAHENSEMMHSPAQDAVLRVHSRISESSMDKSSAV--TARLLVPSQHIGCLLGKGGSIIA 352
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
EMR++T A IRI E +P+ A +DE+VQ++G +DAL+ + R+R
Sbjct: 353 EMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIR 402
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 105/174 (60%), Gaps = 13/174 (7%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ V+R +C +GSIIG+GG ++ L+ +T + I+I E SEERV+ + +
Sbjct: 243 QEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVI-------S 295
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E+ + SPAQDA+ +VH R+ + D VTA+LLVPS IGC++GKGG
Sbjct: 296 AHENSEMMHSPAQDAVLRVHSRI------SESSMDKSSAVTARLLVPSQHIGCLLGKGGS 349
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
I+ +R TGA IRI +E +P CA R+DELVQ++G ++ AL I R+ D
Sbjct: 350 IIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 403
>gi|356522258|ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 559
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 126/407 (30%), Positives = 210/407 (51%), Gaps = 71/407 (17%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D V+R +CP K + GG+ K L D S +EERVV +
Sbjct: 18 DAVFRIVCPAAKTEDVATIGGDGAKILVEDLVS----------AEERVVVIVGEE----- 62
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
S AQ AL +V +R + EE + V+ KL+ PS Q+GCV+G+GG+I
Sbjct: 63 --------SAAQVALVRVFERTVDEETKNS-------TVSCKLVAPSYQVGCVLGRGGKI 107
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ IR +TGA IR+L + P +E +QI+G VKKA+ +++ +DN
Sbjct: 108 VEKIRQDTGAHIRVLPKDQPPLPPPPGEEFIQITGNFGAVKKAVLSVSACFYDN------ 161
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
+SG+ PL G ++AG S ++
Sbjct: 162 -----------NSGAF------------KPLDHHSRGCYSESAGHSSHRMFL-------E 191
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
++ +L+C +G +IGKGG+++ ++ E+GA+I++ + + D+ ++ +S++E E
Sbjct: 192 EDVVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISARETSEQ 251
Query: 342 TLSATIEAVVRLQPRCSE-KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
S EAV+R+ R +E E + +++ +LLV + ++GCL+GKGG +I+EMRR+T
Sbjct: 252 KHSPAQEAVIRVHCRLTEIGFEPSAAVVA---KLLVRSPQVGCLLGKGGLVISEMRRVTG 308
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
A+IRI KE + K S+++E+VQ+ G L +DAL + +R+R +F
Sbjct: 309 ASIRIFSKEQI-KYISQNEEVVQVIGSLQSVQDALFHITSRIRETIF 354
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/174 (40%), Positives = 107/174 (61%), Gaps = 14/174 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
ED V++ LC K+GS+IG+GG +V+ L+ +T + I+I E P S+ERVV + +
Sbjct: 192 EDVVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVI-------S 244
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E ++ SPAQ+A+ +VH R+ E+ G E S V AKLLV S Q+GC++GKGG
Sbjct: 245 ARETSEQKHSPAQEAVIRVHCRLT--EI-GFEPSAA---VVAKLLVRSPQVGCLLGKGGL 298
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
++ +R TGA IRI E + + +++E+VQ+ G V+ AL I SR+ +
Sbjct: 299 VISEMRRVTGASIRIFSKEQIKYIS-QNEEVVQVIGSLQSVQDALFHITSRIRE 351
>gi|147767494|emb|CAN60206.1| hypothetical protein VITISV_036062 [Vitis vinifera]
Length = 242
Score = 184 bits (467), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 117/258 (45%), Positives = 144/258 (55%), Gaps = 62/258 (24%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGR 60
MAG+RNSY K++ SQ+DY D+G NKR GDDR+ F IGP+DTVY L ++
Sbjct: 1 MAGKRNSYEKQAQSQSDYGDNGGNKRINPGDDRNPFTIGPDDTVYIDLYALK-------- 52
Query: 61 GGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
ER+ E F DK VS KVH
Sbjct: 53 --------------------------ERL--------EDALFRVHDKVVSE------KVH 72
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
ED + QVT +LLV SDQIGCVIGKGGQI+QNI SE+GAQI ILK++H
Sbjct: 73 ----------SEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYILKNDH 122
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
L SCAL DELVQISGE + L ++ +LH QHLLAS + +SS GSL+GP
Sbjct: 123 LLSCALSFDELVQISGE----RPLLGRLFIKLHLFFMIIQHLLASIVPIGYSSGGSLIGP 178
Query: 241 TAATPIVGIAPLMGPYGG 258
T+ PI+G+APL+G YGG
Sbjct: 179 TSGAPIMGLAPLVGTYGG 196
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 8/124 (6%)
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
KE ED L + VV + SE E S + T +LLV + +IGC+IGKGG II +
Sbjct: 52 KERLEDALFRVHDKVVS-EKVHSEDFEEASQV---TVQLLVTSDQIGCVIGKGGQIIQNI 107
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
+ A I IL ++L A DE+VQISG+ + L ++ +L + +++
Sbjct: 108 YSESGAQIYILKNDHLLSCALSFDELVQISGE----RPLLGRLFIKLHLFFMIIQHLLAS 163
Query: 456 FVPV 459
VP+
Sbjct: 164 IVPI 167
>gi|356529691|ref|XP_003533422.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 611
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 140/438 (31%), Positives = 221/438 (50%), Gaps = 24/438 (5%)
Query: 29 TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEER 88
+ + R F + P +R +C +G +IG G IV QLR +T KI +++ +E+R
Sbjct: 36 SNNKRPVFKVLPGQIAFRLVCHASIVGGLIGSSGSIVSQLRRETACKIHCEDSLSSAEDR 95
Query: 89 VVTVYSASDETNAFEDGD---KFVSPAQDALFKVHDRVIAEELRGDEDSDGG--HQVTAK 143
V+ V + + GD VS AQ+A+ +V +RV E +S+ +V +K
Sbjct: 96 VILVIGSVSPRKGLQLGDGGEVEVSSAQEAIVRVFERVWGLEAEKGVNSNRAVNSEVFSK 155
Query: 144 LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKK 203
LL + QIG V+GKGG+ + IR+ TGA+IR+ P CA + +ELV I+G VKK
Sbjct: 156 LLAHTSQIGAVVGKGGKNITAIRNSTGAKIRVCPP---PQCATKDEELVLITGGILAVKK 212
Query: 204 ALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT 263
AL ++ L D P + ++S+I S S P A + L+ G
Sbjct: 213 ALISVSHCLQDCPPLCKVPVSSSIPTVSSFDRSSSDPNAEL-FPRLNSLLTSMEGLS--- 268
Query: 264 AGDWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ R+ S + SK E RL+C G VIGK GAI+ + ++GA+I
Sbjct: 269 --IYERTTNSNESSNRDSKGGEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIF 326
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK------IERDSGLISFTTR 373
+ +E + ++T+S+ E E S +AV+ + R E ++ S T R
Sbjct: 327 AAPLSEHAERIVTISAIESLESCNSPAQDAVILVFARIIEDHIGKGFLQVSSMESPVTAR 386
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
LLV TS + G G +I E+R +T A+I+IL E++P AS+DD +VQI+G+ ++
Sbjct: 387 LLVATSTVNSWSGNEGQVILELREVTGADIQILHGESVPNGASDDDVVVQITGEYRCVQN 446
Query: 434 ALIQVMTRLRANLFDREG 451
AL ++ +R+R NL E
Sbjct: 447 ALYKITSRIRDNLSPNEA 464
>gi|326490983|dbj|BAK05591.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 137/432 (31%), Positives = 220/432 (50%), Gaps = 40/432 (9%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+ T +R LCP K G + + D+ + I I PG RV+ +D T
Sbjct: 107 QTTSFRILCPESKA---YGFPASFINNAQDDSGAIITIHPPFPGDPVRVI---ETADGTL 160
Query: 101 AFEDG-DKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGH---------QVTAKLLVPSD 149
DG SPAQ+AL VH R++ + GDED + G +VT +L+VP
Sbjct: 161 READGRPPMFSPAQEALLMVHRRILETQPDDGDEDGEYGPRGKDARDRGKVTTRLIVPRQ 220
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQI 208
+GC++GKGG+I++ +RSET IRIL +++++P C S+++VQ+ GE + VKKA+ I
Sbjct: 221 HVGCLLGKGGKIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEGNNVKKAVAII 280
Query: 209 ASRLHDNPSRSQ-HLLASAISNSHSSS-------GSLVGPTAATPIVGIAPL-----MGP 255
+ RL ++ R + L S H S G P P + M P
Sbjct: 281 SDRLKESLHRDRGPFLRGRNSPEHRISQADEYLGGGQQMPAFEEPYPRFDQIRNNGSMEP 340
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
GY+ D+ G P D E R++CP ++G II+ ++ E G
Sbjct: 341 -PGYEFDSNGSKFNEHPEIPYD-----EIIFRILCPNDKAISLVGSRDGIIDMLQAEVGV 394
Query: 316 AIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLL 375
+++ D+ + ++S+E + L EA++ +Q + +I TTRLL
Sbjct: 395 DVRLTDLIAGSDERTLIITSREGPDHELFPAQEALLHIQTFIVDLGPDKDNII--TTRLL 452
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL 435
VP+S I C G+ GS +++++R T AN++ILP+E LP A E DE++QI G++ A++AL
Sbjct: 453 VPSSEIACFEGRDGS-LSDIQRQTSANVQILPREELPSCALESDELIQIVGEIRAARNAL 511
Query: 436 IQVMTRLRANLF 447
+QV T+LR+ ++
Sbjct: 512 MQVTTKLRSYIY 523
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 85/301 (28%), Positives = 145/301 (48%), Gaps = 37/301 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ ++R LCP K S++G I+ L+ + +R+ + + GS+ER + + S
Sbjct: 361 DEIIFRILCPNDKAISLVGSRDGIIDMLQAEVGVDVRLTDLIAGSDERTLIITSR----- 415
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+AL + ++ D D + +T +LLVPS +I C G+ G
Sbjct: 416 --EGPDHELFPAQEALLHIQTFIV------DLGPDKDNIITTRLLVPSSEIACFEGRDGS 467
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HDN 215
+ +I+ +T A ++IL E LPSCAL SDEL+QI GE + AL Q+ ++L +
Sbjct: 468 L-SDIQRQTSANVQILPREELPSCALESDELIQIVGEIRAARNALMQVTTKLRSYIYREM 526
Query: 216 PSRSQ----HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
P+ Q ++ S S G G PI AP M + D+ S S
Sbjct: 527 PAPIQIGGINVHGSISPAKGSPRGLYAGNDLPMPIYQQAPQMA-TSWHSKDSGLSASGSF 585
Query: 272 Y--SAPRDDL---SSKEF--------SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
S+ DD+ ++K + +L +V P + + + + G+ + QI + SGA++
Sbjct: 586 EQGSSINDDMRQSNTKRYAVPLVTRSTLEVVIPQSAVASLSMRAGSKLAQISEMSGASVT 645
Query: 319 V 319
+
Sbjct: 646 L 646
>gi|357124311|ref|XP_003563844.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 666
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 137/431 (31%), Positives = 219/431 (50%), Gaps = 36/431 (8%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T +R LCP K G + + + D+ + I I G RV+ + +D
Sbjct: 93 TSFRILCPESKT---YGFPASFIIKAQDDSGAIITIHAPFAGDPVRVIEM---ADGVPRD 146
Query: 103 EDG-DKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGH---------QVTAKLLVPSDQI 151
DG SPAQ+AL VH R++ E GDED + G +VT +L+VP +
Sbjct: 147 VDGRPPMFSPAQEALIMVHRRILETEPDDGDEDGEYGPRGKDARDRGKVTTRLVVPRLHV 206
Query: 152 GCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
GC++GKGG+I++ +RSET IRIL +D++ P C S+E+VQI GE + VKKA+ I+
Sbjct: 207 GCLLGKGGKIIEQMRSETKTHIRILPRDQNTPRCVSLSEEVVQIVGEGNCVKKAVAIISD 266
Query: 211 RLHDNPSRSQHLLASAISNSHSSSGS---LVGPTAATPIVGIAPL-----MGPYGGYKGD 262
RL ++ R + S H S + P P + M P GY+ D
Sbjct: 267 RLKESLHRDRGPFRGRNSPEHRISQADEYQQMPAYEEPFARFDQIRNNGSMEP-PGYEFD 325
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ G P D E R++CP ++G I+ ++ E G +++
Sbjct: 326 SNGSKFNEHPEFPYD-----EIIFRILCPNDKANNLVGSRDGILEMLQVEVGVDVRLTDL 380
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIG 382
D+ + ++S+E + L EA++ +Q + + +I TTRLLVP+S +
Sbjct: 381 VVGSDERTVIITSREGPDHELFPAQEALLHIQTHIVDLGPDNDNII--TTRLLVPSSEVA 438
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
C G+ GS+ ++++R T AN++ILP+E LP A E DE++QI G + A+ AL+QV T++
Sbjct: 439 CFEGRDGSL-SDIQRQTSANVQILPREELPSCALESDELIQIVGGIRAARSALMQVTTKI 497
Query: 443 RANLFDREGAV 453
R+ ++ RE +V
Sbjct: 498 RSYIY-REMSV 507
>gi|255583245|ref|XP_002532387.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527911|gb|EEF29999.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 688
Score = 181 bits (459), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 144/442 (32%), Positives = 219/442 (49%), Gaps = 43/442 (9%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVY--- 93
++ P +R +C IG +IGR G + Q+R DT + E V GS+ RV+T+
Sbjct: 19 MLQPGQVAFRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHCDEQVQGSDHRVITIVGPA 78
Query: 94 -----------SASDETNAFEDGDKFVSPAQDALFKVHDRVI----AEELRGDEDSDGGH 138
+ D A E+ + VS AQ+A+ +V +R+ E RG D++ +
Sbjct: 79 SPGKRITLNSTTCHDHNGAEEEEKELVSVAQEAVIRVCERMWEVDGQRERRGGVDNNSNN 138
Query: 139 QVTAK----LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
+ LL + QIG V+GKGG+ V +R E+GA IR L H CA + D+L+QI
Sbjct: 139 SGLGEGYCGLLADTTQIGAVVGKGGKNVLRMRRESGADIRFLPPPH---CASKDDQLIQI 195
Query: 195 SGEASVVKKALCQIASRLHDNP--SRSQHLLASAISN-SHSSSGSLVGPTAATPIVGIAP 251
+G VKKAL + LHD P + LL + SH +S A ++
Sbjct: 196 TGSILAVKKALVAVTDCLHDCPPYEKDPTLLMRPLERASHLASSD----PHAEFFPHLSS 251
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSS--KEFSLRLVCPVANIGGVIGKGGAIINQI 309
L+ P G G T+ S P D + E S RL+C G +IGK G I+ +
Sbjct: 252 LLPPLSGNSG-TSHPLSSDAGEDPNQDAEAVRHEVSFRLLCSNGAAGSIIGKKGTIVRTL 310
Query: 310 RQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK-IER--DSG 366
+ E+GA+I + + + ++T+S+ E E S A + + R E IE+ SG
Sbjct: 311 QNETGASIMFAAPMSMSGERVVTISALENLESWHSPAQNAAILVFARSVEHDIEKGHPSG 370
Query: 367 LI---SFTTRLLVPTSRIGCLIGKGGS--IITEMRRLTKANIRILPKENLPKIASEDDEM 421
LI + T RLLV + + CLI KGG+ I +EM ++ A+IRIL E + ASEDD +
Sbjct: 371 LIEGATVTARLLVASDAVCCLIEKGGTGNIDSEMIEVSGADIRILDGEQIMACASEDDVV 430
Query: 422 VQISGDLDLAKDALIQVMTRLR 443
++I+G+ ++AL V +LR
Sbjct: 431 IEITGEYKNVQNALFMVTGKLR 452
>gi|356496890|ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 602
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 145/458 (31%), Positives = 229/458 (50%), Gaps = 31/458 (6%)
Query: 14 SQTDYADHGPNKRRYT-----GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQL 68
S TD+ KR T R F + P +R +C +G +IG G IV QL
Sbjct: 7 SDTDHQTTPSPKRSNTTTTNRSSKRPVFKVLPGQIAFRLVCHASTVGGLIGSSGSIVSQL 66
Query: 69 RIDTKSKIRIGETVPGSEERVVTVYSASDETNAF---EDGDKFVSPAQDALFKVHDRVIA 125
R +T KI +++ +E+RV+ V + + G+ VS AQ+A+ +V +RV
Sbjct: 67 RRETGCKIHCEDSLSSAEDRVILVIGSLSPRKGLLLGDGGEVEVSSAQEAVVRVFERVWD 126
Query: 126 EELRGDEDSDGG--HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
E +S+ +V +KLL + QIG V+GKGG+ + IR+ TGA+IR+ P
Sbjct: 127 LEAEKGVNSNRAVNGEVFSKLLAHTSQIGAVVGKGGKNITAIRNNTGAKIRVFPP---PQ 183
Query: 184 CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
CA + +ELVQI+G VKKAL ++ L D P L S + + S ++
Sbjct: 184 CATKDEELVQITGGILAVKKALISVSHCLQDCPP-----LCKVPVTSSTPTVSSSDRLSS 238
Query: 244 TPIVGIAP-LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSK----EFSLRLVCPVANIGGV 298
P + P L +G + + R+ S + SK E RL+C G V
Sbjct: 239 DPNAELFPHLNSLLTSMEGLSI--YERTTNSNETSNRDSKGAEHEVVFRLLCSNNVAGSV 296
Query: 299 IGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
IGK GAI+ + ++GA+I + +E + ++T+S+ E E S +AV+ + R
Sbjct: 297 IGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAVESLESCNSPAQDAVILVFARII 356
Query: 359 EK------IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
E ++ S T RLLV TS + C G G +I+E+R +T A+I+IL E++P
Sbjct: 357 EDHIGKGFLQVSSMESPVTARLLVATSTVNCFSGNEGQVISELREVTGADIQILHGESVP 416
Query: 413 KIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
AS++D +VQI+G+ ++AL ++ +R+R NL E
Sbjct: 417 NGASDEDVVVQITGEYRCVQNALYKITSRIRDNLSPNE 454
>gi|357128987|ref|XP_003566150.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 729
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 127/404 (31%), Positives = 213/404 (52%), Gaps = 39/404 (9%)
Query: 84 GSEERVVTVYSASDE--------TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
G EE+V + AS E + + ++ + +A+ V DR+ E+ G+E D
Sbjct: 166 GKEEKVDSERDASKEEKDDPSVAKDTKAEPERVLLSPMNAILHVFDRIFITEI-GNESGD 224
Query: 136 GGHQ---VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ V+ +LLV Q+G ++G G +++ + +++G +IR+ K E LP CAL DEL
Sbjct: 225 PSGERTPVSFRLLVLDSQVGWLLGNRGSVIKQMSADSGCEIRVSK-EKLPLCALLKDELC 283
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS-NSHSSSGSL---VGPTAATPIVG 248
QI+GE V+K L +A L +P R +L S +S ++ + S +L + P + P G
Sbjct: 284 QITGELDSVRKGLNAVAQVLLTHPPRESDVLPSGLSSHAFNRSDALPPGMQPNFSLPFQG 343
Query: 249 IAPLMGPYGGYKG-------DTAGDWSRSLYSAP---------RDDLSSKEFSLRLVCPV 292
+ GP+ T D ++ P + + + RL+C
Sbjct: 344 PSHARGPFDSIDPRPNIPPFPTFPDQRSNIPPFPAFPDALMHSHASVPPEPLTFRLLCSS 403
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+G +IGKGG I I++++G IK+ + + +D +I +S D +S A++
Sbjct: 404 DKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVISGPAHPGDGISPAQNAILH 463
Query: 353 LQPRCSEKI--ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
+Q R + ++ IS RL+V +++GCL+GKGGSII EMR+L+KA+I +L K+
Sbjct: 464 VQRRITPPTANNKEGAAIS---RLIVSPNQVGCLLGKGGSIIAEMRKLSKAHIVVLSKDK 520
Query: 411 LPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DREGAV 453
+PK E DE+VQI+GD + ++AL+Q+ RLR +LF DR A+
Sbjct: 521 IPKGVQESDEVVQITGDSEAIQEALMQITARLRNHLFRDRMAAM 564
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 33/251 (13%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+ PE +R LC K+GSIIG+GG +K ++ DT +I+I ETVP SE+RV+ + +
Sbjct: 390 VPPEPLTFRLLCSSDKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVISGPA- 448
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
GD +SPAQ+A+ V R+ E + ++L+V +Q+GC++GK
Sbjct: 449 -----HPGDG-ISPAQNAILHVQRRITPPTANNKEGA-----AISRLIVSPNQVGCLLGK 497
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG I+ +R + A I +L + +P SDE+VQI+G++ +++AL QI +RL +
Sbjct: 498 GGSIIAEMRKLSKAHIVVLSKDKIPKGVQESDEVVQITGDSEAIQEALMQITARLRN--- 554
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT-------AGDWSRS 270
HL + + +GP P + P G + G T A + +
Sbjct: 555 ---HLFRDRM--------AAMGPNMQPPFGSLDPQFGAFAGSHESTSPRIYPNASQFHKD 603
Query: 271 LYSAPRDDLSS 281
P D++ +
Sbjct: 604 FMGRPLDEMPA 614
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPG 84
K ++T + +I P + R LCP K G++IG+GG I+ ++R + KIR+ E VPG
Sbjct: 27 KTKHTSSQQPPLVIQPGVPLIRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVDEAVPG 86
Query: 85 SEERVVTV-YSASDETNAFEDGDKFV 109
+ERV+ + + D+ + E G + V
Sbjct: 87 CDERVIVITITEKDKEASREQGKQNV 112
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+R++CP G VIGKGG II +IRQE+G I+VD + D+ +I ++ E
Sbjct: 47 IRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVDEAVPGCDERVIVITITE 98
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
++L P+++ G VIGKGG I+ IR E G +IR+ DE +P C R
Sbjct: 48 RILCPTEKCGNVIGKGGVIIAKIRQENGVKIRV--DEAVPGCDER 90
>gi|224095794|ref|XP_002310483.1| predicted protein [Populus trichocarpa]
gi|222853386|gb|EEE90933.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 144/433 (33%), Positives = 239/433 (55%), Gaps = 35/433 (8%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
++R LC +IG IIG+GG I+K L+ T +KIRI + S +RV+T+ + +++
Sbjct: 58 VLFRLLCHDSRIGGIIGKGGNIIKGLQQQTGAKIRIEDAPLESPDRVITIVGSVTQSSVV 117
Query: 103 EDG---DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
G VS Q+AL +V +R++ E+ + DS G V+ +LL +G VIGKGG
Sbjct: 118 FSGIGSAIEVSKGQEALVRVFERIL--EVAAESDSVAGGLVSCRLLAEISSVGAVIGKGG 175
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD-NPSR 218
+ V+ IR + G ++++L D+ LP+CA ++E+++I G+ S VKK L ++ RL D P
Sbjct: 176 KTVEKIRKDCGCKVKVLIDK-LPACASSNEEMIEIEGDVSAVKKGLVAVSHRLQDCQPVD 234
Query: 219 SQHLLAS----AISN-SHSSSGSLVGP--TAATPIVGIAPLMGPYGGYKGDTAGDWS--R 269
+++S A+S S G + P +A P + + P +++ D++
Sbjct: 235 KTRVISSKPVEAVSRVSFPEVGVEILPQHSAVRPTIAQHSVAPPT---VTNSSIDYASGT 291
Query: 270 SLYSAPRDDLSS-------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
L+S + +S+ ++ R++C +GGVIGKGG I+ ++ E+GA I +
Sbjct: 292 HLFSLESERVSTLDTSTPQQQVVFRILCNNDRVGGVIGKGGNIVTALQNETGATISIGPK 351
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-------ISFTTRLL 375
D+ LITV++ E E SA + VV + R E + + GL + RL+
Sbjct: 352 VAGCDERLITVTASENPESRYSAAQKTVVLVFSRVVESV-IEKGLDPGSSEGSPVSVRLV 410
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN-LPKIASEDDEMVQISGDLDLAKDA 434
V +++GCL+GKGG+II+EMR+ T +IRI+ ++ PK E+D +V+I GD KD+
Sbjct: 411 VSPNQVGCLLGKGGTIISEMRKATSTSIRIIGRDQGNPKCVPENDHVVEILGDFLNVKDS 470
Query: 435 LIQVMTRLRANLF 447
+ + RLR NLF
Sbjct: 471 IYHITGRLRDNLF 483
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 63/178 (35%), Positives = 98/178 (55%), Gaps = 10/178 (5%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+ V+R LC ++G +IG+GG IV L+ +T + I IG V G +ER++TV
Sbjct: 311 QQVVFRILCNNDRVGGVIGKGGNIVTALQNETGATISIGPKVAGCDERLITV-------T 363
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRG--DEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A E+ + S AQ + V RV+ + D S G V+ +L+V +Q+GC++GKG
Sbjct: 364 ASENPESRYSAAQKTVVLVFSRVVESVIEKGLDPGSSEGSPVSVRLVVSPNQVGCLLGKG 423
Query: 159 GQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G I+ +R T IRI+ +D+ P C +D +V+I G+ VK ++ I RL DN
Sbjct: 424 GTIISEMRKATSTSIRIIGRDQGNPKCVPENDHVVEILGDFLNVKDSIYHITGRLRDN 481
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 141/303 (46%), Gaps = 27/303 (8%)
Query: 232 SSSGSLVGPTAATPIV--GIAPLMGP--YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLR 287
SS + P A P+ I P P GY + S +AP + S R
Sbjct: 3 SSFSPFLSPPAKRPVYYSTILPDPNPNSTNGYSANKRSKPHPSTSAAP-SPVPSGHVLFR 61
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV-----SSKEFFEDT 342
L+C + IGG+IGKGG II ++Q++GA I+++ + E D +IT+ S F
Sbjct: 62 LLCHDSRIGGIIGKGGNIIKGLQQQTGAKIRIEDAPLESPDRVITIVGSVTQSSVVFSGI 121
Query: 343 LSAT-----IEAVVRLQPRCSE-KIERDS---GLISFTTRLLVPTSRIGCLIGKGGSIIT 393
SA EA+VR+ R E E DS GL+S RLL S +G +IGKGG +
Sbjct: 122 GSAIEVSKGQEALVRVFERILEVAAESDSVAGGLVS--CRLLAEISSVGAVIGKGGKTVE 179
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR-ANLFDREGA 452
++R+ +++L + LP AS ++EM++I GD+ K L+ V RL+ D+
Sbjct: 180 KIRKDCGCKVKVL-IDKLPACASSNEEMIEIEGDVSAVKKGLVAVSHRLQDCQPVDKTRV 238
Query: 453 VSTF-VPVLPYIPVSENGSDGLNYESR---DSKRHGRGPPYGGYGSSDLAAGDSYGSYGS 508
+S+ V + + E G + L S +H PP S D A+G S S
Sbjct: 239 ISSKPVEAVSRVSFPEVGVEILPQHSAVRPTIAQHSVAPPTVTNSSIDYASGTHLFSLES 298
Query: 509 SQL 511
++
Sbjct: 299 ERV 301
>gi|384253488|gb|EIE26963.1| hypothetical protein COCSUDRAFT_59455 [Coccomyxa subellipsoidea
C-169]
Length = 648
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 144/446 (32%), Positives = 228/446 (51%), Gaps = 56/446 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
YR LCP +IG++IG+GG +++Q+R T ++I++ V G ER++++ S+SDE A
Sbjct: 33 YRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISL-SSSDEPGAE-- 89
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
+ AQ+ALF V R ++E ED+ ++LV Q+GCV+GKGG+++ +
Sbjct: 90 ----LCRAQEALFAVQSR-LSEADAAQEDTC----CVVRMLVEQAQVGCVLGKGGEVISD 140
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS-QHLL 223
+R TGA IR+ LP+CA D LV + GEA V AL Q+++ L + R Q
Sbjct: 141 LRRRTGANIRVSDKRDLPACAGSEDSLVAVKGEAQAVSDALRQLSALLRTHSQRKPQQAR 200
Query: 224 ASAISNSHSSSGSLVGPTAAT--------PIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
A N + + + V P A P+ +AP+ P+ + + +A
Sbjct: 201 APMTFNITAVATAAVQPEQAQHRRQPMREPV--LAPIARPHQCHNCLPDAHAMQPRMTAV 258
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS----------SSTE 325
++ + E LRL+ P +IG VIG+ G +I IR ++GA IKV S +
Sbjct: 259 QEASAVVEVQLRLLVPATHIGCVIGRRGEMIRTIRDDTGAHIKVHEGSQGARAFPPSEKK 318
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF-TTRLLVPTS----- 379
G D +ITV++ E +S T EAV L C + SGL R+LVPT
Sbjct: 319 GVDRVITVAAAEAAGAAVSPTEEAVC-LMALC---LLGPSGLPPVPCIRILVPTPQGGTA 374
Query: 380 ------RIGCLIGKGGSIITEMRRLTKANIRILPKEN-----LPK--IASEDDEMVQISG 426
++G ++GKGG+ IT++R+ + A +R++P E LP+ A + ++VQI G
Sbjct: 375 EALSLLQVGGVLGKGGATITQVRKDSGAGVRLVPLEAEDDRWLPRDVAAGQMHKVVQIEG 434
Query: 427 DLDLAKDALIQVMTRLRANLFDREGA 452
+ A+ V +LRA +GA
Sbjct: 435 PITATVKAVRAVCAQLRAWQARSQGA 460
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 134 SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
S G V +LL P+ +IG VIGKGG ++Q +R TGA+I++ P A S+ L+
Sbjct: 25 SAAGAMVEYRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKV-----EPEVAGCSERLIS 79
Query: 194 IS------GEASVVKKALCQIASRLHD 214
+S E ++AL + SRL +
Sbjct: 80 LSSSDEPGAELCRAQEALFAVQSRLSE 106
>gi|293332893|ref|NP_001169297.1| uncharacterized protein LOC100383161 [Zea mays]
gi|224028485|gb|ACN33318.1| unknown [Zea mays]
Length = 664
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 219/431 (50%), Gaps = 42/431 (9%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV-TVYSASDETNA 101
T +R LCP K S V ++R D+ + + + G RV+ TV A E +
Sbjct: 85 TSFRILCPECKAYSF---SPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADG 141
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEEL-----------RGDEDSDGGHQVTAKLLVPSDQ 150
SPAQ+AL VH R++ + RG + D G + T +L+VP
Sbjct: 142 CP---PMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDARDRG-KTTTRLIVPKQH 197
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIA 209
+GC++GKGG+I++ +R ET IRIL + +H P C S+E+VQ+ G+ + VKKA+ I
Sbjct: 198 VGCLLGKGGKIIEQMRMETKTHIRILSRGQHTPRCVSSSEEVVQVVGDGNCVKKAVAIIT 257
Query: 210 SRLHDNPSRSQHLLASAISNSH---SSSGSLVGPTAATPIVGIAPLMGP----------Y 256
RL ++ R + +++ S +G P + L GP
Sbjct: 258 DRLKESLHRDRGPFRGRLNSPEPRISQEDEYLGGVQQMPAY-VESLGGPDQIRNNISMEP 316
Query: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
GY D+ G + P D+ ++ R++CP ++ I+ ++ + G
Sbjct: 317 PGYVFDSNGG---KVIEHP--DILYEDIIFRILCPNDKADSLVATRDGILEMLQTDVGVD 371
Query: 317 IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLV 376
+++ +++ D+ ++ ++S+E + L EAV+ +Q + +I TTRLLV
Sbjct: 372 VRLSDITSDSDERVLIITSREGPDHELFPAQEAVLHIQTHIVDLGPDMDNII--TTRLLV 429
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALI 436
P S I C G+ GS+ ++++R T AN++ILP+E+LP A E DE++QI G++ A++ALI
Sbjct: 430 PASEIACFDGREGSL-SDIQRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNALI 488
Query: 437 QVMTRLRANLF 447
QV T+LR+ L+
Sbjct: 489 QVTTKLRSFLY 499
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 143/306 (46%), Gaps = 47/306 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
ED ++R LCP K S++ I++ L+ D +R+ + S+ERV+ + S
Sbjct: 337 EDIIFRILCPNDKADSLVATRDGILEMLQTDVGVDVRLSDITSDSDERVLIITSR----- 391
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+A+ + ++ D D + +T +LLVP+ +I C G+ G
Sbjct: 392 --EGPDHELFPAQEAVLHIQTHIV------DLGPDMDNIITTRLLVPASEIACFDGREGS 443
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
+ +I+ +T A ++IL E LPSCAL SDEL+QI GE + AL Q+ ++L R
Sbjct: 444 L-SDIQRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSFLYRE- 501
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG---PYGGYK-----------GDTAGD 266
+ I + + + P A +P P G P G Y D+ G
Sbjct: 502 --MPDPIQVGNINLHGAISPVAGSP---RGPYQGNDIPMGAYHQASQLATSWHSKDSGGS 556
Query: 267 WSRSLY--SAPRDDL---SSKEF--------SLRLVCPVANIGGVIGKGGAIINQIRQES 313
S S S DD+ ++K F +L +V P + + + + G+ + QI + S
Sbjct: 557 ASGSFEQGSNINDDIRQSATKRFAVPLVTRSTLEIVIPNSAVASLTMRAGSKLAQISEIS 616
Query: 314 GAAIKV 319
GAA+ +
Sbjct: 617 GAAVTL 622
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 88/204 (43%), Gaps = 47/204 (23%)
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV---------------DSSST 324
S+ S R++CP + ++R +SGA + V D +
Sbjct: 81 STATTSFRILCPECK---AYSFSPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARR 137
Query: 325 EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE----------------KIERDSGLI 368
E D C S EA++ + R E K RD G
Sbjct: 138 EADGC----------PPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDARDRG-- 185
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK-ENLPKIASEDDEMVQISGD 427
TTRL+VP +GCL+GKGG II +MR TK +IRIL + ++ P+ S +E+VQ+ GD
Sbjct: 186 KTTTRLIVPKQHVGCLLGKGGKIIEQMRMETKTHIRILSRGQHTPRCVSSSEEVVQVVGD 245
Query: 428 LDLAKDALIQVMTRLRANLFDREG 451
+ K A+ + RL+ +L G
Sbjct: 246 GNCVKKAVAIITDRLKESLHRDRG 269
>gi|413953982|gb|AFW86631.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 581
Score = 174 bits (440), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 213/422 (50%), Gaps = 29/422 (6%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV-TVYSASDETNAFE 103
+R LCP K G V ++R D+ + + + G RV+ TV A E +
Sbjct: 91 FRILCPECKA---YGFPPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGRP 147
Query: 104 DGDKFVSPAQDALFKVHDRVIAEEL-----------RGDEDSDGGHQVTAKLLVPSDQIG 152
SPAQ+AL VH R++ + RG + D G + T +L+VP +G
Sbjct: 148 ---PMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRG-KTTTRLIVPKMHVG 203
Query: 153 CVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
C++GKGG+I++ +R ET IRIL +D+H P C S+E+VQ+ G+ + VKKA+ I R
Sbjct: 204 CLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDR 263
Query: 212 LHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
L ++ R + +++ + + +G + +T+ +
Sbjct: 264 LKESLHRDRGPFRGRMNSPEPRISQEDDYLGVSQMPAYEESLGRSDQIRNNTSMEPPGYE 323
Query: 272 YSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
+ + D+ + R++CP + ++ I+ ++ + G +++
Sbjct: 324 FDSNDGKVIEHPDILYDDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAG 383
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
D+ ++ ++S+E + L EAV+ +Q + +I TTRLLVP+S I C
Sbjct: 384 SDERVVIITSREGPDHELFPAQEAVLHIQTHIVDLGPDKDNII--TTRLLVPSSEIACFD 441
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
G+ GS+ ++++R T AN++ILPKE+LP A E DE++QI G++ A++ALIQV T+LR+
Sbjct: 442 GREGSL-SDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSF 500
Query: 446 LF 447
L+
Sbjct: 501 LY 502
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 14/172 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R LCP K+ +++ I++ L+ D +R+ + + GS+ERVV + S
Sbjct: 340 DDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSR----- 394
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+A+ + ++ D D + +T +LLVPS +I C G+ G
Sbjct: 395 --EGPDHELFPAQEAVLHIQTHIV------DLGPDKDNIITTRLLVPSSEIACFDGREGS 446
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ +I+ +T A ++IL E LP CAL SDEL+QI GE S + AL Q+ ++L
Sbjct: 447 L-SDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKL 497
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK-ENLPKIASED 418
K RD G TTRL+VP +GCL+GKGG II +MR TK +IRILP+ ++ P+ S
Sbjct: 183 KDSRDRG--KTTTRLIVPKMHVGCLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLS 240
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFDREG 451
+E+VQ+ GD + K A+ + RL+ +L G
Sbjct: 241 EEVVQVVGDGNCVKKAVAIITDRLKESLHRDRG 273
>gi|413953981|gb|AFW86630.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 667
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 122/422 (28%), Positives = 213/422 (50%), Gaps = 29/422 (6%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV-TVYSASDETNAFE 103
+R LCP K G V ++R D+ + + + G RV+ TV A E +
Sbjct: 91 FRILCPECKA---YGFPPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARREADGRP 147
Query: 104 DGDKFVSPAQDALFKVHDRVIAEEL-----------RGDEDSDGGHQVTAKLLVPSDQIG 152
SPAQ+AL VH R++ + RG + D G + T +L+VP +G
Sbjct: 148 ---PMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRG-KTTTRLIVPKMHVG 203
Query: 153 CVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
C++GKGG+I++ +R ET IRIL +D+H P C S+E+VQ+ G+ + VKKA+ I R
Sbjct: 204 CLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNCVKKAVAIITDR 263
Query: 212 LHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
L ++ R + +++ + + +G + +T+ +
Sbjct: 264 LKESLHRDRGPFRGRMNSPEPRISQEDDYLGVSQMPAYEESLGRSDQIRNNTSMEPPGYE 323
Query: 272 YSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
+ + D+ + R++CP + ++ I+ ++ + G +++
Sbjct: 324 FDSNDGKVIEHPDILYDDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAG 383
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
D+ ++ ++S+E + L EAV+ +Q + +I TTRLLVP+S I C
Sbjct: 384 SDERVVIITSREGPDHELFPAQEAVLHIQTHIVDLGPDKDNII--TTRLLVPSSEIACFD 441
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
G+ GS+ ++++R T AN++ILPKE+LP A E DE++QI G++ A++ALIQV T+LR+
Sbjct: 442 GREGSL-SDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKLRSF 500
Query: 446 LF 447
L+
Sbjct: 501 LY 502
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 97/172 (56%), Gaps = 14/172 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R LCP K+ +++ I++ L+ D +R+ + + GS+ERVV + S
Sbjct: 340 DDIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSR----- 394
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D + PAQ+A+ + ++ D D + +T +LLVPS +I C G+ G
Sbjct: 395 --EGPDHELFPAQEAVLHIQTHIV------DLGPDKDNIITTRLLVPSSEIACFDGREGS 446
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ +I+ +T A ++IL E LP CAL SDEL+QI GE S + AL Q+ ++L
Sbjct: 447 L-SDIQRQTSANVQILPKEDLPLCALESDELIQIVGEISAARNALIQVTTKL 497
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK-ENLPKIASED 418
K RD G TTRL+VP +GCL+GKGG II +MR TK +IRILP+ ++ P+ S
Sbjct: 183 KDSRDRG--KTTTRLIVPKMHVGCLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLS 240
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFDREG 451
+E+VQ+ GD + K A+ + RL+ +L G
Sbjct: 241 EEVVQVVGDGNCVKKAVAIITDRLKESLHRDRG 273
>gi|294462548|gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 140/222 (63%), Gaps = 19/222 (8%)
Query: 307 NQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSG 366
NQIRQE+GA IKV + D+ +I VSSKEF +D +S T+EAV+ LQ + SEK +
Sbjct: 20 NQIRQETGANIKVIDQVPDCDERVIVVSSKEFVDDRISPTLEAVLHLQFKTSEKSIEEGK 79
Query: 367 LISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
TTR LVP++ IGCL+GKGGSII+EMR+ T+ANIRI+ K+N+PK A E++E+VQ+ G
Sbjct: 80 EGVITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNIPKCAGENEELVQVIG 139
Query: 427 DLDLAKDALIQVMTRLRANLF-DREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGR 485
++D+A++ALIQ+ TRLR+N+F D++G + V P + + +GR
Sbjct: 140 EVDVAREALIQIATRLRSNVFKDQDGGSNAGSVVPPSLSL-----------------YGR 182
Query: 486 GPPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSG 527
G P G+G D G + Y LG G+A G Y S S G
Sbjct: 183 GVPDSGFGRGD-ELGSTGRMYSLPSLGLEGTASGRYSSASYG 223
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 151/321 (47%), Gaps = 81/321 (25%)
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL----FKVHD 121
Q+R +T + I++ + VP +ERV+ V S E D +SP +A+ FK +
Sbjct: 20 NQIRQETGANIKVIDQVPDCDERVIVVSSK-------EFVDDRISPTLEAVLHLQFKTSE 72
Query: 122 RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
+ I E G +T + LVPS+ IGC++GKGG I+ +R T A IRI+ +++
Sbjct: 73 KSIEEGKEG--------VITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNI 124
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPT 241
P CA ++ELVQ+ GE V ++AL QIA+RL N + Q + S++GS+V P+
Sbjct: 125 PKCAGENEELVQVIGEVDVAREALIQIATRLRSNVFKDQ--------DGGSNAGSVVPPS 176
Query: 242 AATPIVGIAPLMGPYGGY-KGDTAGDWSRSLYSAPRDDL--------------------- 279
+ G+ P G+ +GD G R +YS P L
Sbjct: 177 LSLYGRGV-----PDSGFGRGDELGSTGR-MYSLPSLGLEGTASGRYSSASYGSLGGVQN 230
Query: 280 -------SSKEFS-------------------LRLVCPVANIGGVIGKGGAIINQIRQES 313
S FS + + P ++G ++G+GG+ I+QIR+ S
Sbjct: 231 GGAGGYGSFSSFSTSRAPAGGLPAGVAKSGSTVEVTIPNKSVGSILGRGGSNISQIREIS 290
Query: 314 GAAIKVDSSSTEGDDCLITVS 334
GA +K+ S G D ++ +S
Sbjct: 291 GAKVKLHESKPGGTDRVVEIS 311
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 36/54 (66%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
P + +GSI+GRGG + Q+R + +K+++ E+ PG +RVV + ++T+A +
Sbjct: 268 PNKSVGSILGRGGSNISQIREISGAKVKLHESKPGGTDRVVEISGTPEQTHAAQ 321
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 47/97 (48%), Gaps = 21/97 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI--GETVP---GSEERVVTVYSASDETN 100
R+L P IG ++G+GG I+ ++R T++ IRI + +P G E +V V D
Sbjct: 86 RFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIMSKDNIPKCAGENEELVQVIGEVD--- 142
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG 137
A++AL ++ R+ + + D DGG
Sbjct: 143 ----------VAREALIQIATRLRSNVFK---DQDGG 166
>gi|226530329|ref|NP_001151982.1| nucleic acid binding protein [Zea mays]
gi|195651499|gb|ACG45217.1| nucleic acid binding protein [Zea mays]
gi|224029689|gb|ACN33920.1| unknown [Zea mays]
gi|413947861|gb|AFW80510.1| nucleic acid binding protein [Zea mays]
Length = 705
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 121/361 (33%), Positives = 196/361 (54%), Gaps = 23/361 (6%)
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGD--EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ + A A+ V DR+ A E + S V+ ++LV Q G ++GKGG +V+
Sbjct: 197 ERVIPLALKAVSLVFDRIFATEGNNETGNASAASAPVSLRMLVLYSQAGWLLGKGGSVVK 256
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
+ ++ G +IR+LKD +LPSCAL +D+L QI+GE V+K L ++ L +P + +
Sbjct: 257 QMAADNGCEIRVLKD-NLPSCALLNDKLCQITGEIDSVRKGLNAVSEVLLAHPPKETDAV 315
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIA-----PLMGPYGGYKGD-TAGDWSRSLYSAPRD 277
A S+ SS P G+ PL GP G D ++
Sbjct: 316 ADVHSSGSSSRSLFSQPDGLP--SGMQSNFHIPLQGPPSQANGPFDIVDLQPPIHG--HA 371
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ + S R++CP +G +IGKGG I+ I+ ++G IKV + + DD +I++S
Sbjct: 372 SVAIESLSFRMLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGPA 431
Query: 338 FFEDTLSATIEAVVRLQPRC----SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
D +S A++ +Q + S+K E + T RL+V +++GC++GKGGSII
Sbjct: 432 HPSDGISPAQNAILHVQRKIMLPSSDKKEGPA-----TCRLIVSGNQVGCVLGKGGSIIA 486
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DREGA 452
EMR+L+ A I +L K+ +P+ E DE++QI+G + ++AL+QV RLR +LF DR A
Sbjct: 487 EMRKLSGAFIVVLSKDKIPRGVPEHDEVIQINGSCEAIQEALMQVTARLRNHLFRDRMPA 546
Query: 453 V 453
V
Sbjct: 547 V 547
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 163/354 (46%), Gaps = 74/354 (20%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E +R LCP K+GSIIG+GG IVK ++ DT +I++ +TVP +++R++++ + ++
Sbjct: 376 ESLSFRMLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGPAHPSD 435
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+SPAQ+A+ V +++ L + +G T +L+V +Q+GCV+GKGG
Sbjct: 436 G-------ISPAQNAILHVQRKIM---LPSSDKKEG--PATCRLIVSGNQVGCVLGKGGS 483
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ +R +GA I +L + +P DE++QI+G +++AL Q+ +RL +
Sbjct: 484 IIAEMRKLSGAFIVVLSKDKIPRGVPEHDEVIQINGSCEAIQEALMQVTARLRN------ 537
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG-------YKGD--------TAG 265
HL + VGP P + P GP+ G + D A
Sbjct: 538 HLFRDRMP--------AVGPNMRPPFGLLDPQFGPFSGNHESSSLFHKDFMGRPLDGIAA 589
Query: 266 DWS----RSL-------------------YSAP-----RDDLSSKEFSLRLVCPVANIGG 297
W+ R L + P +L+++ RLV PV
Sbjct: 590 PWTVKGMRDLSDPVSISDIPGAGHREAGGFPGPGQPSMMPNLTAEVLVPRLVIPV----- 644
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVV 351
+ G+ G +++IR+ S A I V + + D + +S + +EA V
Sbjct: 645 LCGEDGGCLDRIREFSEAKITVAEPTADAMDTAVLISGTPEQMHAARSLVEAFV 698
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGP-NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIG 59
M + + +RS +DY G K ++ + QF I P ++R LCP K G++IG
Sbjct: 5 MTPSKRPFQRRS---SDYDGRGKWQKTKHPSPHKSQFKIEPGVPIFRILCPASKSGNVIG 61
Query: 60 RGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
+GG I+ ++R +T+ +IR+ PG +ERV+ + +A+ + A
Sbjct: 62 KGGAIIAKIRQETRMRIRVDRAAPGCDERVIFITAANKDEEA 103
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 86/325 (26%), Positives = 130/325 (40%), Gaps = 69/325 (21%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++L P+ + G VIGKGG I+ IR ET +IR+ D P C DE V
Sbjct: 48 RILCPASKSGNVIGKGGAIIAKIRQETRMRIRV--DRAAPGC----DERV---------- 91
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
+ +A +N +GS G GG
Sbjct: 92 -------------------IFITA-ANKDEEAGSEQGGEND-------------GGAAAS 118
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSL---RLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
T GD + D +SKE ++ C N G G I+ ++ G K
Sbjct: 119 TGGDHEKD------KDNNSKEQNVDPEENNCNEQNDDSEKGSGKEEIDGFEKDHGTEEKN 172
Query: 320 DSSST----EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC------SEKIERDSGLIS 369
DS E DD L+ +K E + ++AV + R +E +
Sbjct: 173 DSEKEHNKGEKDDPLVAKVTKLEPERVIPLALKAVSLVFDRIFATEGNNETGNASAASAP 232
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
+ R+LV S+ G L+GKGGS++ +M IR+L K+NLP A +D++ QI+G++D
Sbjct: 233 VSLRMLVLYSQAGWLLGKGGSVVKQMAADNGCEIRVL-KDNLPSCALLNDKLCQITGEID 291
Query: 430 LAKDALIQVMTRLRANLFDREGAVS 454
+ L V L A+ AV+
Sbjct: 292 SVRKGLNAVSEVLLAHPPKETDAVA 316
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 3/77 (3%)
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFS---LRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
D G W ++ + +P E R++CP + G VIGKGGAII +IRQE+ I+
Sbjct: 20 DGRGKWQKTKHPSPHKSQFKIEPGVPIFRILCPASKSGNVIGKGGAIIAKIRQETRMRIR 79
Query: 319 VDSSSTEGDDCLITVSS 335
VD ++ D+ +I +++
Sbjct: 80 VDRAAPGCDERVIFITA 96
>gi|242055819|ref|XP_002457055.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
gi|241929030|gb|EES02175.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
Length = 716
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 120/372 (32%), Positives = 194/372 (52%), Gaps = 59/372 (15%)
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-----VTAKLLVPSDQIGCVIGKGGQ 160
++ + A A+ V DR+ A GD + G V+ +LLV Q G ++GKGG
Sbjct: 208 ERVIPSALKAISLVFDRIFAA---GDNNETGNASAASTPVSLRLLVLYSQAGWLLGKGGS 264
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP---- 216
+++ + ++ G +IR+L+D +LPSCAL +D+L QI+GE V+K L ++ L +P
Sbjct: 265 VIKQMSADNGCEIRVLRD-NLPSCALLNDKLCQITGEIDSVRKGLNAVSELLLAHPPKET 323
Query: 217 -----------------SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
++S L + SN H L GP+ A I L P G+
Sbjct: 324 DAVSGVHSSGSSSRSLFNQSDGLPSGMQSNFHIP---LQGPSQANGPFDIIDLQPPIHGH 380
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S P + LS R++CP +G +IGKGG I+ I++++G IKV
Sbjct: 381 ------------ASVPIESLS-----FRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKV 423
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR----CSEKIERDSGLISFTTRLL 375
+ + +D +I++S D +S A++ +Q + S+K E + RL+
Sbjct: 424 LDTVPKSEDRIISISGPAHPSDGISPAQNAILHVQRKIMLPTSDKKEGPA-----ICRLI 478
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL 435
V +++GC++GKGGSII EMR+L+ A I +L K+ +P+ E DE+VQISG + ++AL
Sbjct: 479 VSANQVGCVLGKGGSIIAEMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEAL 538
Query: 436 IQVMTRLRANLF 447
+Q+ RLR +LF
Sbjct: 539 MQITARLRNHLF 550
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 128/241 (53%), Gaps = 26/241 (10%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E +R LCP K+GSIIG+GG IVK ++ DT +I++ +TVP SE+R++++ + ++
Sbjct: 386 ESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISGPAHPSD 445
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+SPAQ+A+ V +++ L + +G +L+V ++Q+GCV+GKGG
Sbjct: 446 G-------ISPAQNAILHVQRKIM---LPTSDKKEG--PAICRLIVSANQVGCVLGKGGS 493
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ +R +GA I +L + +P DE+VQISG +++AL QI +RL ++ R
Sbjct: 494 IIAEMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEALMQITARLRNHLFRVD 553
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
+ A +GP P + GP+ G ++ + + P D +S
Sbjct: 554 RMPA-------------MGPNMRPPFGLLDSQFGPFAGNH-ESPSLFHKDFMGRPLDGIS 599
Query: 281 S 281
+
Sbjct: 600 A 600
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 11/143 (7%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGP-NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIG 59
M + + K S +DY G K +++ + QF I P +R LCP K G++IG
Sbjct: 5 MTPSKRPFQKNS---SDYNGRGKWQKTKHSSPHKSQFKIEPGVPFFRILCPASKSGNVIG 61
Query: 60 RGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA-SDETNAFEDG---DKFVSPAQDA 115
+GG I+ ++R +T+ +IR+ PG +ERV+ + + DE + E G D+ V+ + A
Sbjct: 62 KGGAIIAKIREETRMRIRVDRAAPGCDERVIFITAVDKDEEASSERGVENDRGVAASTGA 121
Query: 116 LFKVHDRVIAEELRGDEDSDGGH 138
HDR G++D +G +
Sbjct: 122 ---GHDRDGDNSKEGNDDPEGNN 141
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 265 GDWSRSLYSAPRDDLSSKEFS---LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
G W ++ +S+P E R++CP + G VIGKGGAII +IR+E+ I+VD
Sbjct: 23 GKWQKTKHSSPHKSQFKIEPGVPFFRILCPASKSGNVIGKGGAIIAKIREETRMRIRVDR 82
Query: 322 SSTEGDDCLITVSS 335
++ D+ +I +++
Sbjct: 83 AAPGCDERVIFITA 96
Score = 38.5 bits (88), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
++L P+ + G VIGKGG I+ IR ET +IR+ D P C R
Sbjct: 48 RILCPASKSGNVIGKGGAIIAKIREETRMRIRV--DRAAPGCDER 90
>gi|357485457|ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355514351|gb|AES95974.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 596
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 139/450 (30%), Positives = 225/450 (50%), Gaps = 31/450 (6%)
Query: 16 TDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSK 75
TD+ P +R R F + P +R +C +G +IG G IV QLR +T K
Sbjct: 13 TDHHHPQPPLKR-NNRKRPVFKLLPGQIAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCK 71
Query: 76 IRIGETVPGSEERVVTVYSASDETNAFEDGDK--FVSPAQDALFKVHDRVIAEELRGDED 133
I + V G+++RV+ V + + GD+ VS AQ+ + +V DRV G E
Sbjct: 72 IHCEDAVVGTDDRVILVIGSMSDRKGIVLGDREMEVSNAQEGVVRVFDRV-----WGLES 126
Query: 134 SDGGH-QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
GG+ +V KLL S Q+G ++GKGG+ + NIR+ +G+ IR+ H CA + +EL+
Sbjct: 127 EKGGNGEVYGKLLAHSSQVGAIVGKGGKNISNIRNNSGSNIRVCPAPH---CAAKDEELI 183
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS-NSHSSSGSLVGPTAATPIVGIAP 251
I+GE+ VKKAL ++ L D P + L + + NS S S + P
Sbjct: 184 LITGESLAVKKALIYVSYCLQDCPPMGKVSLNTPPTINSSDRSTSYTHEDLFPHLNSWLP 243
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAP-RDDLSSK----EFSLRLVCPVANIGGVIGKGGAII 306
M +G + D S+ +A L SK RL+C G VIGK G+I+
Sbjct: 244 SM------EGLSINDASKQTTNANGNSSLDSKGSGHAVVFRLLCSNNVAGSVIGKKGSIV 297
Query: 307 NQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSG 366
+GA+I + ++ ++T+S+ E E + S +AV+ + R +E R+
Sbjct: 298 RTFEIRTGASIVFAPPLGQYEERIVTISAFENLESSNSPAQDAVILVFTRIAEDHIRNGF 357
Query: 367 LIS------FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
+ T RLL+ TS + L G G +I+E+R+++ A+I++L E +P AS++D
Sbjct: 358 QPATAVESPVTARLLITTSTLHLLTGNEGQVISELRQVSGADIQLLHGEPIPN-ASDNDV 416
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDRE 450
+VQI+G ++AL ++ + +R N E
Sbjct: 417 VVQITGGYRCVENALRKITSIIRDNPLTNE 446
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 153/324 (47%), Gaps = 27/324 (8%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
V+R LC GS+IG+ G IV+ I T + I + EER+VT+ +AFE
Sbjct: 276 VFRLLCSNNVAGSVIGKKGSIVRTFEIRTGASIVFAPPLGQYEERIVTI-------SAFE 328
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVIGKGGQI 161
+ + SPAQDA+ V R+ + +R + VTA+LL+ + + + G GQ+
Sbjct: 329 NLESSNSPAQDAVILVFTRIAEDHIRNGFQPATAVESPVTARLLITTSTLHLLTGNEGQV 388
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
+ +R +GA I++L E +P+ A +D +VQI+G V+ AL +I S + DNP ++
Sbjct: 389 ISELRQVSGADIQLLHGEPIPN-ASDNDVVVQITGGYRCVENALRKITSIIRDNPLTNEL 447
Query: 222 LLASAISNSHSSSGSLVGPTAAT------PIVGIAPL-MGPYGGYKGDTAGDWSRSLYSA 274
L + I S + V T P + P G Y K G+ +L
Sbjct: 448 LAEAKIKPSFPLNKDTVRSKFITRKKSSFPFARVPPQNAGVYQAKKVTENGESHTNLIEN 507
Query: 275 P---RDDL--SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV---DSSSTEG 326
R ++ + ++ ++ G V G+ G +++IRQ SGA + V S+ T G
Sbjct: 508 VEPGRGNIVATVTNTTVEIIVSEHVFGSVYGEDGGNLDRIRQISGADVTVFDPSSTGTSG 567
Query: 327 DDCLITVSSKEFF--EDTLSATIE 348
+I+ + + F + L A I+
Sbjct: 568 GKVVISGTPDQTFAAQSLLQAFIQ 591
>gi|224097168|ref|XP_002310861.1| predicted protein [Populus trichocarpa]
gi|222853764|gb|EEE91311.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 131/402 (32%), Positives = 204/402 (50%), Gaps = 35/402 (8%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVY-SAS 96
+ P +R +C KIG++IG G ++ Q+R++T + E V GSE R + V SAS
Sbjct: 21 LQPGQVAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGSAS 80
Query: 97 DETNAF--EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-QVTAKLLVPSDQIGC 153
E ED VS AQ+A+ +V +R+ D DGG + LL + QIG
Sbjct: 81 PERKIAVGEDETVEVSAAQEAVVRVLERM----WEVDAVKDGGDCEGYCGLLANTSQIGA 136
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV-VKKALCQIASRL 212
V+G+ G+ ++ ++ +GA I IL P CAL+ D+L+QI+G ++V VKKA+ I S L
Sbjct: 137 VVGREGRNIKRMKRASGAHIWILPA---PLCALKEDQLIQITGSSTVAVKKAVIAITSCL 193
Query: 213 HDNPSRSQH---LLASAISNSHSSSGSLVGPTAATPIVGIAP-LMGPYGGYKGDTAGDWS 268
D P + L A+ S S + P P L Y + A D
Sbjct: 194 QDCPPYEKDEVDLSLEAVRRRRSGS-------SGDPHAEFFPHLCSLLPTYSENIATDKD 246
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P + L + R++CP G +IGKGG+++ ++ ++GA+I + T D
Sbjct: 247 ---HKKPNEQL---QVQFRMICPHGAAGSIIGKGGSVVRALQNQTGASIILAPPITNSDG 300
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEK-IERDSGL-----ISFTTRLLVPTSRIG 382
L+TVS+ E E + S A++ + R E IER L I+ T LL+P++R+
Sbjct: 301 RLVTVSALENLESSHSPAQNALLLVFARSIEHDIERARSLGLIEEITVTATLLLPSNRVS 360
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
CLI +GG I +EM T A+I+IL + AS +D ++Q+
Sbjct: 361 CLIERGGRIDSEMIETTGADIQILQGDQFFYCASNNDVVLQV 402
>gi|224116392|ref|XP_002317286.1| predicted protein [Populus trichocarpa]
gi|222860351|gb|EEE97898.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/363 (33%), Positives = 187/363 (51%), Gaps = 41/363 (11%)
Query: 9 GKRSHSQTDYADHGPNKRRYTGD---DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
GKRS Q DY N++R+ D + D I VYR LCP IGS+IG+ G+++
Sbjct: 5 GKRSRPQRDYDGDTNNQKRHKDDKGTNNDGLI------VYRILCPDGVIGSVIGKSGKVI 58
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKVH 120
+R ++++++++ + PG+++R++T+Y E + D F + AQDAL KVH
Sbjct: 59 NSIRHESRARVKVVDPFPGAKDRIITIYCHIKEKEDVDVDDDFNHTNPLCAAQDALLKVH 118
Query: 121 DRVI-AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KD 178
+ A GD D + ++LVP+ Q +IGK G ++ +RS+T I+I+ KD
Sbjct: 119 AAISNAVASLGDSDKRLRDKEECQILVPASQSANIIGKAGATIKRLRSKTRTSIKIIAKD 178
Query: 179 EHLP--SCALRSDELVQISGEASVVKKALCQIASRLHD-NPSRSQHLLASAISNSHSSSG 235
P SCA+ D + I+GE+ VKKAL +++ ++ NP L A+ S
Sbjct: 179 STDPTHSCAMDFDNFLLITGESEAVKKALFAVSAIMYKFNPKEEIPLEATVPEPPPSIII 238
Query: 236 SLVGPT--------AATPIVG---IAPLMGP-----YGGYKGDTAGDW---SRSLYSAPR 276
P A PIV + P++G GY GD W + +L P
Sbjct: 239 PSDVPIYQPGGFYPNAEPIVSSRSVPPILGATHIPELQGY-GDMGSSWPVYTSTLPVVPS 297
Query: 277 DDLSSK--EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
S+ E +R++CP IG VIGKGG+ I IRQ SGA I+VD + + D+C+ITV+
Sbjct: 298 FGNVSRYEELIIRVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECIITVT 357
Query: 335 SKE 337
+ E
Sbjct: 358 ATE 360
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 20/172 (11%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV----------SSK 336
R++CP IG VIGK G +IN IR ES A +KV D +IT+
Sbjct: 39 RILCPDGVIGSVIGKSGKVINSIRHESRARVKVVDPFPGAKDRIITIYCHIKEKEDVDVD 98
Query: 337 EFFEDT--LSATIEAVVRLQPRCSEKI----ERDSGLI-SFTTRLLVPTSRIGCLIGKGG 389
+ F T L A +A++++ S + + D L ++LVP S+ +IGK G
Sbjct: 99 DDFNHTNPLCAAQDALLKVHAAISNAVASLGDSDKRLRDKEECQILVPASQSANIIGKAG 158
Query: 390 SIITEMRRLTKANIRILPKENLP---KIASEDDEMVQISGDLDLAKDALIQV 438
+ I +R T+ +I+I+ K++ A + D + I+G+ + K AL V
Sbjct: 159 ATIKRLRSKTRTSIKIIAKDSTDPTHSCAMDFDNFLLITGESEAVKKALFAV 210
>gi|222618061|gb|EEE54193.1| hypothetical protein OsJ_01028 [Oryza sativa Japonica Group]
Length = 748
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 120/354 (33%), Positives = 191/354 (53%), Gaps = 14/354 (3%)
Query: 112 AQDALFKVHDRVIAEELR---GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
A A+ V DR+ E+ GD + H V+ +LLV Q+G ++GK G +++ + ++
Sbjct: 245 AVKAILLVFDRIFVNEMENGTGDASGERNH-VSLRLLVLDSQVGWLLGKNGSVIKQMSTD 303
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
+ +IR+ KD+ LP CAL DEL QI+GE V+K L +A L +P + +L +
Sbjct: 304 SCCEIRVSKDK-LPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVLGA--H 360
Query: 229 NSHSSSGSLVGPTAATPIVGIAP-LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLR 287
NS SS P P G+ P L P+ G ++ +L + + + R
Sbjct: 361 NSGSSRSFFNQPDVLPP--GMQPNLHLPFQGPNVAHLPNFPEALMHG-HGSVPPEPLTFR 417
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATI 347
L+C +GG+IGKGG I I+ ++G IKV + + +D ++ +S D +S
Sbjct: 418 LLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQ 477
Query: 348 EAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
A++ +Q + G RL+V +++GCL+GKGGSII EMR+L+ A+I +L
Sbjct: 478 NAILHVQRKIVPTSNTKEG--PAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLS 535
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
K+ +PK E+DE+VQISG + ++AL+Q+ RLR +LF R+ ST V P
Sbjct: 536 KDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF-RDRMASTVPNVQP 588
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 116/203 (57%), Gaps = 16/203 (7%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+ PE +R LC K+G IIG+GG +K ++ DT +I++ +TVP SE+R+V + +
Sbjct: 409 VPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAH 468
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+ +SPAQ+A+ V +++ ++ G + +L+V +Q+GC++GK
Sbjct: 469 PGDG-------ISPAQNAILHVQRKIVPT-----SNTKEGPAI-CRLIVSPNQVGCLLGK 515
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG I+ +R +GA I +L + +P +DE+VQISG + +++AL QI +RL ++
Sbjct: 516 GGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF 575
Query: 218 RSQHLLASAISNSHSSSGSLVGP 240
R + +AS + N G LV P
Sbjct: 576 RDR--MASTVPNVQPPFG-LVDP 595
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 5 RNSYGKRSHSQTDYADHGPNKRRYTGDD---RDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
R++ KR + +G K + T + + Q I+ P ++R LCP K G++IG+G
Sbjct: 47 RSTPSKRPFQKNSSEQNGRGKWQKTKHNSLQQPQLIVQPGVPIFRILCPTSKSGNVIGKG 106
Query: 62 GEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS 94
G I+ ++R +T KIR+ E VPG +ERV+ + +
Sbjct: 107 GGIIAKIRQETGVKIRVDEVVPGCDERVIVITA 139
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 265 GDWSRSLYSA---PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
G W ++ +++ P+ + R++CP + G VIGKGG II +IRQE+G I+VD
Sbjct: 66 GKWQKTKHNSLQQPQLIVQPGVPIFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDE 125
Query: 322 SSTEGDDCLITVSS 335
D+ +I +++
Sbjct: 126 VVPGCDERVIVITA 139
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
++L P+ + G VIGKGG I+ IR ETG +IR+ DE +P C R
Sbjct: 91 RILCPTSKSGNVIGKGGGIIAKIRQETGVKIRV--DEVVPGCDER 133
>gi|297806983|ref|XP_002871375.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
gi|297317212|gb|EFH47634.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 142/482 (29%), Positives = 238/482 (49%), Gaps = 57/482 (11%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
++R L + ++G +IG+ G +++QL+ T S+I + + S RV+T+ + T+
Sbjct: 24 VLFRILGHVSQVGDVIGKDGRVIRQLKESTNSQIWVEKAPLDSLYRVITIIADVGSTSRV 83
Query: 103 EDG-----------------DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLL 145
+ G + VS AQ AL +V + A +R S V+++LL
Sbjct: 84 KLGVIVNNASNRKKEEVQEQEVEVSRAQGALIRVFE---ALNVRFGTSST----VSSRLL 136
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
+ + + VIGKGG++++ IR ETG + I + +LPSCA D +V+I G VKK L
Sbjct: 137 MEACHVVTVIGKGGELMEMIRKETGCNVEICQ-YNLPSCADPDDVMVKIEGNVFAVKKVL 195
Query: 206 CQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAG 265
I+SRL S + + + N H+ ++V P A L ++GD +
Sbjct: 196 VSISSRLQACQSIFKKKM---VGNPHNMQTNVV-PREA--------LYRASNVFQGDISV 243
Query: 266 --------DWSRSLY---SAPRDDL--SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
D SL+ S PR D + ++ L+++C IG VIG G A I ++ E
Sbjct: 244 SRLKHRELDPLESLHRNLSQPRKDSEDNKQQVVLKILCSKERIGRVIGNGRATIRDLQSE 303
Query: 313 SGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER---DSGLIS 369
+GA I + S+ + D+ L T+++ E S + A+V + + E DSGL S
Sbjct: 304 TGAFITLGSNRLDCDEGLFTITASEDPNAKNSPSQRALVLVFSKMYENTTAKVLDSGLTS 363
Query: 370 -FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
T RL+V +++I CL+G+ G I + +++ T A I +L E PK SE++++VQISG
Sbjct: 364 SITARLVVRSNQINCLMGEEGHIKSTIQQRTGAFITVLNVEQNPKCVSENNQIVQISGAF 423
Query: 429 DLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPP 488
K+A+ QV + LR +L ++ + + PV + P N+ S + G P
Sbjct: 424 PNVKEAINQVTSMLREDLINQSFQMGSHFPVNYFNPCIRPEDSFPNWFSPTT---GYAPN 480
Query: 489 YG 490
+G
Sbjct: 481 FG 482
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 94/175 (53%), Gaps = 7/175 (4%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+ V + LC +IG +IG G ++ L+ +T + I +G +E + T+ +AS++ N
Sbjct: 273 QQVVLKILCSKERIGRVIGNGRATIRDLQSETGAFITLGSNRLDCDEGLFTI-TASEDPN 331
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A SP+Q AL V ++ DS +TA+L+V S+QI C++G+ G
Sbjct: 332 AKN------SPSQRALVLVFSKMYENTTAKVLDSGLTSSITARLVVRSNQINCLMGEEGH 385
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
I I+ TGA I +L E P C ++++VQISG VK+A+ Q+ S L ++
Sbjct: 386 IKSTIQQRTGAFITVLNVEQNPKCVSENNQIVQISGAFPNVKEAINQVTSMLRED 440
>gi|294464716|gb|ADE77865.1| unknown [Picea sitchensis]
Length = 348
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 117/179 (65%), Gaps = 2/179 (1%)
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
S +E R++CP IG VIG+ G+II ++ + GA IK+ + D+ +I +S+ E
Sbjct: 17 FSGEELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIIISANEV 76
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
ED LS EA++ +Q + + G+I TT+LL+P+++ GCL+GKGG+II+EMR+
Sbjct: 77 LEDNLSPAQEALLHIQSQIVDLGPDKDGVI--TTKLLIPSNQTGCLLGKGGAIISEMRKQ 134
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
T+ANIRILP+E+LP A + DEMVQI GD+ A+ AL+QV +RLR+ + G F+
Sbjct: 135 TRANIRILPREDLPPCALDSDEMVQIVGDIRAARAALVQVTSRLRSFIHREIGISGPFL 193
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 112/173 (64%), Gaps = 13/173 (7%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ V+R LCP +KIGS+IGR G I+K L+ D +KI+I + VPGS+ER++ + +
Sbjct: 20 EELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIIISA----NE 75
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
ED +SPAQ+AL + +++ +L D+D +T KLL+PS+Q GC++GKGG
Sbjct: 76 VLEDN---LSPAQEALLHIQSQIV--DLGPDKDG----VITTKLLIPSNQTGCLLGKGGA 126
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
I+ +R +T A IRIL E LP CAL SDE+VQI G+ + AL Q+ SRL
Sbjct: 127 IISEMRKQTRANIRILPREDLPPCALDSDEMVQIVGDIRAARAALVQVTSRLR 179
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 82/197 (41%), Gaps = 60/197 (30%)
Query: 123 VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP 182
V+ R E S G ++ ++L P+ +IG VIG+ G I+++++ + GA+I+I + +P
Sbjct: 5 VVEYHARDYEPSFSGEELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKI--TDAVP 62
Query: 183 SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTA 242
SDE + I V L DN S +Q L S
Sbjct: 63 G----SDERIIIISANEV-----------LEDNLSPAQEALLHIQSQ------------- 94
Query: 243 ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKG 302
IV + P D G + L + P G ++GKG
Sbjct: 95 ---IVDLGP----------DKDGVITTKL-----------------LIPSNQTGCLLGKG 124
Query: 303 GAIINQIRQESGAAIKV 319
GAII+++R+++ A I++
Sbjct: 125 GAIISEMRKQTRANIRI 141
>gi|218187831|gb|EEC70258.1| hypothetical protein OsI_01061 [Oryza sativa Indica Group]
Length = 722
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 119/353 (33%), Positives = 186/353 (52%), Gaps = 38/353 (10%)
Query: 112 AQDALFKVHDRVIAEELR---GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
A A+ V DR+ E+ GD + H V+ +LLV Q+G ++GK G +++ + ++
Sbjct: 245 AVKAILLVFDRIFVNEMENGTGDASGERNH-VSLRLLVLDSQVGWLLGKNGSVIKQMSTD 303
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAIS 228
+ +IR+ KD+ LP CAL DEL QI+GE V+K L +A L +P + +L +
Sbjct: 304 SCCEIRVSKDK-LPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVLGA--- 359
Query: 229 NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRL 288
H+S GP A LM +G S P + L+ RL
Sbjct: 360 --HNS-----GPNVAHLPNFPEALMHGHG---------------SVPPEPLT-----FRL 392
Query: 289 VCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIE 348
+C +GG+IGKGG I I+ ++G IKV + + +D ++ +S D +S
Sbjct: 393 LCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQN 452
Query: 349 AVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK 408
A++ +Q + G RL+V +++GCL+GKGGSII EMR+L+ A+I +L K
Sbjct: 453 AILHVQRKIVPTSNTKEG--PAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSK 510
Query: 409 ENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
+ +PK E+DE+VQISG + ++AL+Q+ RLR +LF R+ ST V P
Sbjct: 511 DKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF-RDRMASTVPNVQP 562
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/203 (33%), Positives = 116/203 (57%), Gaps = 16/203 (7%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+ PE +R LC K+G IIG+GG +K ++ DT +I++ +TVP SE+R+V + +
Sbjct: 383 VPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAH 442
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+ +SPAQ+A+ V +++ ++ G + +L+V +Q+GC++GK
Sbjct: 443 PGDG-------ISPAQNAILHVQRKIVPT-----SNTKEGPAI-CRLIVSPNQVGCLLGK 489
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG I+ +R +GA I +L + +P +DE+VQISG + +++AL QI +RL ++
Sbjct: 490 GGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF 549
Query: 218 RSQHLLASAISNSHSSSGSLVGP 240
R + +AS + N G LV P
Sbjct: 550 RDR--MASTVPNVQPPFG-LVDP 569
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 5 RNSYGKRSHSQTDYADHGPNKRRYTGDD---RDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
R++ KR + +G K + T + + Q I+ P ++R LCP K G++IG+G
Sbjct: 47 RSTPSKRPFQKNSSEQNGRGKWQKTKHNSLQQPQLIVQPGVPIFRILCPTSKSGNVIGKG 106
Query: 62 GEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS 94
G I+ ++R +T KIR+ E VPG +ERV+ + +
Sbjct: 107 GGIIAKIRQETGVKIRVDEVVPGCDERVIVITA 139
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 265 GDWSRSLYSA---PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
G W ++ +++ P+ + R++CP + G VIGKGG II +IRQE+G I+VD
Sbjct: 66 GKWQKTKHNSLQQPQLIVQPGVPIFRILCPTSKSGNVIGKGGGIIAKIRQETGVKIRVDE 125
Query: 322 SSTEGDDCLITVSS 335
D+ +I +++
Sbjct: 126 VVPGCDERVIVITA 139
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
++L P+ + G VIGKGG I+ IR ETG +IR+ DE +P C R
Sbjct: 91 RILCPTSKSGNVIGKGGGIIAKIRQETGVKIRV--DEVVPGCDER 133
>gi|297740744|emb|CBI30926.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 100/291 (34%), Positives = 162/291 (55%), Gaps = 37/291 (12%)
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS--------------- 230
+ D V I+G++ VKKAL I++ ++ R + L + + +
Sbjct: 1 MEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPA 60
Query: 231 ---HSSSGSLVGPTAATPIVGIAPLMGPYGGYK--GDTAGDWSRSL-----YSAPRDDLS 280
+ S+ S+V + P++ A + GY G T +S +L Y A R
Sbjct: 61 GGFYPSADSIVSARSVPPVLA-ATHVPELQGYSDMGSTWPVYSSNLPVVSGYGASR---- 115
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S+E +R++CP IG VIG+GG+ I +R+ SGA ++VD + + D+CLITV+S E +
Sbjct: 116 SEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVD 175
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
D S +EAV+ LQ + ++ E D + RLLVP+ IGC+IGK GSII E+R+ T+
Sbjct: 176 DLKSMAVEAVLLLQAKIND--EDDD---TVAIRLLVPSKIIGCIIGKSGSIINEIRKRTR 230
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN-LFDRE 450
A++RI K PK A +DE++++ G++ +DAL+Q++ RLR + L DR+
Sbjct: 231 ADVRI-SKSERPKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDRD 280
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 105/339 (30%), Positives = 153/339 (45%), Gaps = 51/339 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ + R LCP KIG +IGRGG +K +R + + + + +T +E ++TV S
Sbjct: 117 EELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST----- 171
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E D S A +A+ + ++ DED D V +LLVPS IGC+IGK G
Sbjct: 172 --ESVDDLKSMAVEAVLLLQAKI------NDEDDD---TVAIRLLVPSKIIGCIIGKSGS 220
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ IR T A +RI K E P CA +DEL+++ GE V+ AL QI RL D+ + +
Sbjct: 221 IINEIRKRTRADVRISKSER-PKCADANDELIEVVGEVGSVRDALVQIVLRLRDDALKDR 279
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDW------------- 267
N+ + + SL A + + P P D +
Sbjct: 280 D----TGHNTSAGTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQRAETGSGLGLLSSSSLY 335
Query: 268 -------------SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
S S YS+ + +V P +G V+GKGGA I IR+ SG
Sbjct: 336 GYGSLSVGENAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVGKVMGKGGANIANIRKISG 395
Query: 315 AAIKV-DSSSTEGDDCLI---TVSSKEFFEDTLSATIEA 349
A I++ DS S+ GD + T K E+ + A I A
Sbjct: 396 AVIEISDSKSSRGDRVALISGTPEQKRTAENLIQAFIMA 434
>gi|115475229|ref|NP_001061211.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|38636959|dbj|BAD03220.1| putative KH domain protein [Oryza sativa Japonica Group]
gi|113623180|dbj|BAF23125.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|215695475|dbj|BAG90642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 128/374 (34%), Positives = 187/374 (50%), Gaps = 58/374 (15%)
Query: 189 DELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSS-----------SGSL 237
D VQI+G+A V+KAL +++ ++ PS+ L +++S+ S S +
Sbjct: 4 DNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPSSNF 63
Query: 238 VGPTAATPIVGIAPL--MG--PYGGYKGDTAGDWSR-----------SLYSAPRDDLSSK 282
P+ A G L +G P+ +A SR Y+ P+ S
Sbjct: 64 YSPSDAAISSGHPSLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPAYNTPK---CSG 120
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E LR++CP IG VIGKGG I IR+ESGA I VD S + ++ +IT++S E +D
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
SA +EAV+ LQ + ++ E L RLLVP IGCLIGKGGSI+ +MR TKA
Sbjct: 181 KSAAVEAVLLLQSKINDDNEGKMNL-----RLLVPGKVIGCLIGKGGSIVNDMRSKTKAA 235
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF----DREGA------ 452
I I E P+ AS DE+V++ G+++ +DAL+Q++ RLR ++ DR+ +
Sbjct: 236 IYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRDSVDRQNSEKDGKL 294
Query: 453 -VSTFVPV------LPYIPVSENGSDGLNYESR-DSKRHGRGPPYGG-YGSSDLAAGD-- 501
V+T P+ LP + L Y+ R D +R P+ YG S L A D
Sbjct: 295 TVATTDPLYASSYPLPALLPYRQQITPLGYDHRGDIERGLEVYPHSSLYGYSSLQAIDDG 354
Query: 502 --SYGSYGSSQLGG 513
+ SY S GG
Sbjct: 355 YSAVSSYASKGYGG 368
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 100/343 (29%), Positives = 159/343 (46%), Gaps = 62/343 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
+ V R LCP KIG +IG+GG +K +R ++ ++I + ++ EE ++T+ S
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSN------ 174
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E D S A +A+ + ++ ++D++G ++ +LLVP IGC+IGKGG I
Sbjct: 175 -EATDDAKSAAVEAVLLLQSKI-------NDDNEG--KMNLRLLVPGKVIGCLIGKGGSI 224
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V ++RS+T A I I K E P A SDELV++ GE ++ AL QI RL D+
Sbjct: 225 VNDMRSKTKAAIYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDD------ 277
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIA---PLMGPYG------GYKGDTAGDWSRSLY 272
+L ++ +S + P+ + P + PY GY D GD R L
Sbjct: 278 VLRDSVDRQNSEKDGKLTVATTDPLYASSYPLPALLPYRQQITPLGY--DHRGDIERGLE 335
Query: 273 SAPRDDL-------------------SSKEF-----SLRLVCPVANIGGVIGKGGAIINQ 308
P L +SK + + + P + + V+GK G ++
Sbjct: 336 VYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTIPASGLSKVMGKHGTNLDN 395
Query: 309 IRQESGAAIKV--DSSSTEGDDCLI--TVSSKEFFEDTLSATI 347
I + SGA I++ SS G I T K+ E+ + A I
Sbjct: 396 IIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAENLIKAFI 438
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
Length = 807
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 130/455 (28%), Positives = 220/455 (48%), Gaps = 64/455 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE------- 98
R L P ++G ++GRGG+IV+++R ++ ++IR+ +P ++ + S DE
Sbjct: 186 RLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRV---LP--KDHIPACASPGDELIQGSMK 240
Query: 99 ---------------TNAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVT 141
+ A +G V L+K V + L+G G
Sbjct: 241 RKGGVGRVVGGCCCCSRALREGYGVV------LWKKLGEVETLLRRLQGQVIKGGAE--- 291
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
D +G + KG ++S R LK P+ + + I+G V
Sbjct: 292 -------DIMGSRLSKGCSFA--VKSFYSLASRFLKG--FPTSIMWNPWGPNITGTFPAV 340
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS-LVGPTAATPIVGI-APLMGPYGGY 259
+KAL ++S L DNP A+A G+ + G + P G + L GP
Sbjct: 341 RKALLLVSSCLQDNPRADATNSAAAKPTGGMLHGNGMPGQLDSFPQRGYGSSLHGPDYHS 400
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+G ++ ++ + R L +E +L+C +G +IGKGG+II ++ E+GA+IK+
Sbjct: 401 RGYSSMPGPENIGANHRMVLE-EEVVFKLLCHFEKVGSLIGKGGSIIRXLQSETGASIKI 459
Query: 320 DSSSTEGDDCLITVSSKEFF-----EDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL 374
++ + D+ ++ +S++E E S +AV+R+ R +E I + G + RL
Sbjct: 460 ADAAPDSDERVVVISAREACTLTNXEQKHSPAQDAVIRVHCRIAE-IGFEPGA-AVVARL 517
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
LV + +IGCL+GKGG II+EMRR T A+IRI KE +PK S++DE+VQ+ G L +DA
Sbjct: 518 LVHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDA 577
Query: 435 LIQVMTRLRANLFDREGAVST-----FVPVLPYIP 464
L + +R+R +F + ++S ++ P IP
Sbjct: 578 LFCITSRIRETIFPLKPSISNVNGPPYMSSFPEIP 612
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/223 (35%), Positives = 125/223 (56%), Gaps = 19/223 (8%)
Query: 1 MAGQRNSYGKRSHSQT----DYADHG----PNKRRYTGDDRDQFIIGPEDTVYRYLCPIR 52
M GQ +S+ +R + + DY G P + R ++ E+ V++ LC
Sbjct: 377 MPGQLDSFPQRGYGSSLHGPDYHSRGYSSMPGPENIGANHR---MVLEEEVVFKLLCHFE 433
Query: 53 KIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
K+GS+IG+GG I++ L+ +T + I+I + P S+ERVV + ++ E + ++ SPA
Sbjct: 434 KVGSLIGKGGSIIRXLQSETGASIKIADAAPDSDERVVVI--SAREACTLTNXEQKHSPA 491
Query: 113 QDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
QDA+ +VH R+ + + G V A+LLV S QIGC++GKGG I+ +R TGA
Sbjct: 492 QDAVIRVHCRI------AEIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGAS 545
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
IRI E +P C ++DELVQ+ G V+ AL I SR+ +
Sbjct: 546 IRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALFCITSRIRET 588
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 101/181 (55%), Gaps = 30/181 (16%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS-------- 94
++R LCP K G +IG+GG I++Q R DT +KIRI ++V G +ERV+ + +
Sbjct: 56 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 115
Query: 95 ------------------ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD- 135
++ N D SPAQ AL +V +R++ + +E
Sbjct: 116 ASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 175
Query: 136 ---GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
G V +LL PS+Q+GCV+G+GG+IV+ IR E+GAQIR+L +H+P+CA DEL+
Sbjct: 176 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELI 235
Query: 193 Q 193
Q
Sbjct: 236 Q 236
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/179 (31%), Positives = 94/179 (52%), Gaps = 41/179 (22%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV------SSKE-- 337
R++CP GGVIGKGGAII Q R+++GA I++D S D+ +I + S +E
Sbjct: 58 FRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREAS 117
Query: 338 -------------------------FFEDTLSATIEAVVRLQPRC--------SEKIERD 364
+D S +A+VR+ R ++ + D
Sbjct: 118 AICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKED 177
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
G ++ RLL P++++GC++G+GG I+ ++R+ + A IR+LPK+++P AS DE++Q
Sbjct: 178 LGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQ 236
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 88/186 (47%), Gaps = 27/186 (14%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
QV ++L P+ + G VIGKGG I++ R +TGA+IRI D+ + C + ++ I +A
Sbjct: 55 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRI--DDSVLGC---DERVILIVADA 109
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLAS-----AISNSHSSSGSLVGPTAATPIVGIAPLM 253
K+ I ++ S +L S A+ + SS A +V + +
Sbjct: 110 VKSKREASAICGAEANDGEESANLSNSSPNPVAVDDDESS-------PAQQALVRVFERI 162
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
K D ++DL + RL+ P +G V+G+GG I+ +IRQES
Sbjct: 163 -----LKVDEE-----REEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQES 212
Query: 314 GAAIKV 319
GA I+V
Sbjct: 213 GAQIRV 218
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 159/307 (51%), Gaps = 28/307 (9%)
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
+ISG S +KAL +++ L DNP S+ SG GP + VG P
Sbjct: 69 EISGSFSAARKALLLVSTCLQDNPRPD---------TSNFPSGRPFGPPGSG--VGCPPG 117
Query: 253 MGPYGG---YKGDTAGDWSRSLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
+ P+ D+ +S+ PR +E R++C +GGVIGKGG
Sbjct: 118 VDPHSQRSYLPPPHVPDYHARNFSSNGAAPGPRF-FVEQEIVFRMICLNDMVGGVIGKGG 176
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE-KIE 362
+ I ++ E+GA++KV + D+ +I +S++E E S + +A++R+ + SE ++
Sbjct: 177 STIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVYSKISEASMD 236
Query: 363 RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ S S RLLVP IGCL+GKGGSII EMR+LT A+IRI E +P+ A +DE+V
Sbjct: 237 KSS---SVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELV 293
Query: 423 QISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKR 482
Q++G +DAL+ + R+R + + S +P PY PV N S + + S
Sbjct: 294 QVTGSFQSIQDALLHITGRIRDLIIPPKPHPSGGMP--PYPPVG-NPSHHQSRQEAPSHH 350
Query: 483 HGRGPPY 489
G PPY
Sbjct: 351 SGGMPPY 357
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 104/174 (59%), Gaps = 13/174 (7%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ V+R +C +G +IG+GG ++ L+ +T + +++ + V S+ER++ + +
Sbjct: 155 QEIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVI-------S 207
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E+ + SP+QDAL +V+ ++ + D V A+LLVP+ IGC++GKGG
Sbjct: 208 ARENSEMMRSPSQDALLRVYSKI------SEASMDKSSSVPARLLVPAQHIGCLLGKGGS 261
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
I+ +R TGA IRI +E +P CA R+DELVQ++G ++ AL I R+ D
Sbjct: 262 IIAEMRKLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 315
>gi|388500506|gb|AFK38319.1| unknown [Lotus japonicus]
Length = 437
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/287 (34%), Positives = 154/287 (53%), Gaps = 35/287 (12%)
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS--------------- 230
+ D V I+GE+ VK+AL ++S ++ + L + + +
Sbjct: 1 MEFDNFVVITGESESVKRALFAVSSIMYKFGPKEDISLDTTVPEAPPSIIIPSEVPYYPH 60
Query: 231 ---HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS------- 280
+ SS ++ P A I+G + GY D W LYS+ +S
Sbjct: 61 GGLYPSSDPIIPPRAVPQIMGGTNIQD-VQGY-ADIGNTWP--LYSSALPVVSGGVDASQ 116
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S+E +R++CP IG VIG+GG+ I +RQ SG I+VD S D+CLI +++ E
Sbjct: 117 SEELIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTESPS 176
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
D S +EAV+ +Q + S+ E D+ + +LLVP+ IGC+IGK GSII E+R+ T+
Sbjct: 177 DLKSMAVEAVLLIQGKISD--EDDT---EVSIQLLVPSKVIGCIIGKSGSIINEIRKRTR 231
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
A+IRI K + PK A +DE+V++ G +D +DALIQ++ RLR ++
Sbjct: 232 ADIRI-SKGDKPKCADVNDELVEVGGAIDCVRDALIQIILRLRDDVL 277
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 152/336 (45%), Gaps = 44/336 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+ + R LCP KIG +IGRGG +K +R + ++I + ++ +E ++ + +
Sbjct: 118 EELIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTT----- 172
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E S A +A+ + ++ DED +V+ +LLVPS IGC+IGK G
Sbjct: 173 --ESPSDLKSMAVEAVLLIQGKI------SDEDD---TEVSIQLLVPSKVIGCIIGKSGS 221
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
I+ IR T A IRI K + P CA +DELV++ G V+ AL QI RL D+ R +
Sbjct: 222 IINEIRKRTRADIRISKGDK-PKCADVNDELVEVGGAIDCVRDALIQIILRLRDDVLRER 280
Query: 221 -------------------HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ L + + S + +V A G+ L G
Sbjct: 281 DTGHNPTIGGESLYSGGAAYSLPPMLPSVSSVAAPMVYDQRAESATGMGMLSSSSLYGYG 340
Query: 262 DTAGDWSR---SLYSAPRDDLSS--KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
+ W S+ S P S +L ++ P +G V+GKGGA I IR+ SGA
Sbjct: 341 SLSQMWESGYGSISSYPTKLYGSLPPPSTLDILIPANAVGKVLGKGGANIANIRKISGAT 400
Query: 317 IKVDSSSTEGDDCLI---TVSSKEFFEDTLSATIEA 349
I++ + GD + T K E+ + A I A
Sbjct: 401 IEISDARARGDRIALISGTPEEKRAAENLIQAFIMA 436
>gi|326530414|dbj|BAJ97633.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 130/218 (59%), Gaps = 22/218 (10%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFE 340
+EFS+R++C IG VIG+ GA + Q+ Q++GA I V + + LI +SSKE
Sbjct: 65 EEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVISSKEIPA 124
Query: 341 DTLSATIEAVVRLQPRCS-----EKIERD-SGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
D +S TIEA++ L + S E E + SG TRL+VP+ ++GC++G+GG +ITE
Sbjct: 125 DPVSPTIEALILLHSKVSASKVSEPSESEPSGEHKLVTRLVVPSKKVGCILGEGGKVITE 184
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVS 454
MRR A IR+ K + PK S ++E+VQ+SG D+A++AL ++ +RLR + R+G +S
Sbjct: 185 MRRRIGAEIRVYSKADKPKYLSFNEELVQVSGSPDIAREALTEIASRLRDRIL-RDG-IS 242
Query: 455 TFVPVLPYIPVSENGSDGLNYESRDSKRHGR--GPPYG 490
+F +G + SR+ ++GR PPYG
Sbjct: 243 SF-----------DGPPADIFPSREFTQYGRPVNPPYG 269
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 106/205 (51%), Gaps = 10/205 (4%)
Query: 13 HSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDT 72
H D+ P Y + PE+ R LC IG +IGR G V+Q+ T
Sbjct: 37 HLHVDHPPPMPLLDPYRNRPLQYPVPEPEEFSIRILCASELIGPVIGRSGANVRQVEQQT 96
Query: 73 KSKIRIGETVP-GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD 131
++I + E S ER++ + S + VSP +AL +H +V A ++
Sbjct: 97 GARIVVQELHKDASGERLIVISSKEIPADP-------VSPTIEALILLHSKVSASKVSEP 149
Query: 132 EDSD--GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSD 189
+S+ G H++ +L+VPS ++GC++G+GG+++ +R GA+IR+ P ++
Sbjct: 150 SESEPSGEHKLVTRLVVPSKKVGCILGEGGKVITEMRRRIGAEIRVYSKADKPKYLSFNE 209
Query: 190 ELVQISGEASVVKKALCQIASRLHD 214
ELVQ+SG + ++AL +IASRL D
Sbjct: 210 ELVQVSGSPDIAREALTEIASRLRD 234
>gi|115479947|ref|NP_001063567.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|113631800|dbj|BAF25481.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|215695028|dbj|BAG90219.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 398
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 105/174 (60%), Gaps = 13/174 (7%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ V+R +C +GSIIG+GG ++ L+ +T + I+I E SEERV+ + +
Sbjct: 24 QEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVI-------S 76
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E+ + SPAQDA+ +VH R+ + D VTA+LLVPS IGC++GKGG
Sbjct: 77 AHENSEMMHSPAQDAVLRVHSRI------SESSMDKSSAVTARLLVPSQHIGCLLGKGGS 130
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
I+ +R TGA IRI +E +P CA R+DELVQ++G ++ AL I R+ D
Sbjct: 131 IIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 184
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/162 (40%), Positives = 102/162 (62%), Gaps = 2/162 (1%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
+E R++C +G +IGKGG+ I ++ E+GA+IK+ +++ ++ +I +S+ E E
Sbjct: 24 QEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAHENSEM 83
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
S +AV+R+ R SE S + T RLLVP+ IGCL+GKGGSII EMR++T A
Sbjct: 84 MHSPAQDAVLRVHSRISESSMDKSSAV--TARLLVPSQHIGCLLGKGGSIIAEMRKITGA 141
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
IRI E +P+ A +DE+VQ++G +DAL+ + R+R
Sbjct: 142 GIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIR 183
>gi|222641854|gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japonica Group]
Length = 609
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 105/174 (60%), Gaps = 13/174 (7%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ V+R +C +GSIIG+GG ++ L+ +T + I+I E SEERV+ + +
Sbjct: 235 QEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVI-------S 287
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A E+ + SPAQDA+ +VH R+ + D VTA+LLVPS IGC++GKGG
Sbjct: 288 AHENSEMMHSPAQDAVLRVHSRI------SESSMDKSSAVTARLLVPSQHIGCLLGKGGS 341
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
I+ +R TGA IRI +E +P CA R+DELVQ++G ++ AL I R+ D
Sbjct: 342 IIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALLHITGRIRD 395
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 112/192 (58%), Gaps = 9/192 (4%)
Query: 258 GYKGDTAGDWSRSLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
GY + D+ YS+ PR +E R++C +G +IGKGG+ I ++
Sbjct: 206 GYLPPSMPDYHARNYSSNMAAPGPRF-FVEQEIVFRMICLNEMVGSIIGKGGSTIRALQS 264
Query: 312 ESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFT 371
E+GA+IK+ +++ ++ +I +S+ E E S +AV+R+ R SE S + T
Sbjct: 265 ETGASIKIIEPNSDSEERVIVISAHENSEMMHSPAQDAVLRVHSRISESSMDKSSAV--T 322
Query: 372 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLA 431
RLLVP+ IGCL+GKGGSII EMR++T A IRI E +P+ A +DE+VQ++G
Sbjct: 323 ARLLVPSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSI 382
Query: 432 KDALIQVMTRLR 443
+DAL+ + R+R
Sbjct: 383 QDALLHITGRIR 394
>gi|79550843|ref|NP_178410.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|45752620|gb|AAS76208.1| At2g03110 [Arabidopsis thaliana]
gi|46359791|gb|AAS88759.1| At2g03110 [Arabidopsis thaliana]
gi|330250570|gb|AEC05664.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 153
Score = 136 bits (342), Expect = 4e-29, Method: Composition-based stats.
Identities = 77/153 (50%), Positives = 106/153 (69%), Gaps = 11/153 (7%)
Query: 76 IRIGETVPGSEERVVTVYSASDETNAFEDGDK-FVSPAQDALFKVHD-------RVIAEE 127
+R+ E +PG +ERVVT+YS S+E N ED ++ FV PA DALFKVHD +
Sbjct: 1 MRVNEALPGCDERVVTIYSNSEERNRIEDDNEDFVCPAFDALFKVHDMVVVEEFDDDDDY 60
Query: 128 LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSC--A 185
DE S+G VT ++LVPSDQIG +IGKGG I+Q +R++T AQIR+ ++++LP C A
Sbjct: 61 NDNDEYSEGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCALA 119
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
L DEL+QI G+ S V++AL Q+A L++NPSR
Sbjct: 120 LSHDELLQIIGDPSAVREALYQVAFLLYNNPSR 152
Score = 60.8 bits (146), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 366 GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP--KIASEDDEMVQ 423
G T R+LVP+ +IG LIGKGG II +R T A IR+ +NLP +A DE++Q
Sbjct: 69 GQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCALALSHDELLQ 127
Query: 424 ISGDLDLAKDALIQVMTRLRAN 445
I GD ++AL QV L N
Sbjct: 128 IIGDPSAVREALYQVAFLLYNN 149
>gi|169647179|gb|ACA61608.1| hypothetical protein AP1_E07.1 [Arabidopsis lyrata subsp. petraea]
Length = 532
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 152/321 (47%), Gaps = 71/321 (22%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP-GSEERVVTVYSAS--- 96
E +R LCP + G+IIG+GG +++ L+ T SKIR+ + +P SEERVV + + S
Sbjct: 240 ESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKK 299
Query: 97 -DETNAFE-----------------------DGDKFVSPAQDALFKVHDRVI----AEEL 128
D++N F+ D ++ S AQ AL +V +R++ A +
Sbjct: 300 KDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASV 359
Query: 129 RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
GD G + +++V +Q+ ++ KGG+++Q IR ++GA +RI + +P CA
Sbjct: 360 DGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAFPG 419
Query: 189 DELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG 248
D ++QI+G+ S VKKAL I + L + + A P
Sbjct: 420 DVVIQITGKFSSVKKALLLITNCLQE--------------------------SGAPPTWD 453
Query: 249 IAPLMGPYGGYKGDTAG-----DWSRSLYSAPRD------DLSSKEFSLRLVCPVANIGG 297
P P GY D W P D + +E S RL+CP +G
Sbjct: 454 ECPF--PQPGYPPDYHSMEYHPQWDHPPNPMPEDVVPFNRPVVEEEVSFRLLCPADKVGS 511
Query: 298 VIGKGGAIINQIRQESGAAIK 318
+IGKGGA++ ++ ESGA+IK
Sbjct: 512 LIGKGGAVVRALQNESGASIK 532
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 96/229 (41%), Gaps = 52/229 (22%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV------------- 319
S+ R +++ RL+CP + G +IGKGG++I ++ +G+ I+V
Sbjct: 231 SSKRPATAAESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVV 290
Query: 320 -------------------DSSSTE-----GDDCLITVSSKEFFEDTLSATIEAVVRLQP 355
+ SS E G +C T + E+ S+ A++R+
Sbjct: 291 LIIAPSGKKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDD--EEAPSSAQMALLRVLE 348
Query: 356 RC-----SEKIE---RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
R + ++ D G R++V +++ L+ KGG +I +R + A +RI
Sbjct: 349 RIVFGDDAASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISS 408
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+ +P A D ++QI+G K AL+ L N GA T+
Sbjct: 409 TDQIPPCAFPGDVVIQITGKFSSVKKALL-----LITNCLQESGAPPTW 452
>gi|356546743|ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 663
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
+E S R++C +GGVIGKGG I+ ++ E+GA I + E +D LIT+++ E E
Sbjct: 309 QEVSFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPLVAECEDRLITIAASENPES 368
Query: 342 TLSATIEAVVRLQPRCSE---KIERDSGL---ISFTTRLLVPTSRIGCLIGKGGSIITEM 395
S +A V + R E + E DSGL + T RL+VP+S++GCLIGKGG I++E+
Sbjct: 369 RYSPAQKAAVLVFSRSIEVGFEKELDSGLNKGSTVTVRLVVPSSQVGCLIGKGGVIVSEI 428
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
R+ T ANIRI+ + +PK AS++D++VQISG+ +DAL RLR NLF
Sbjct: 429 RKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNATGRLRDNLF 480
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 104/177 (58%), Gaps = 9/177 (5%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +R LC ++G +IG+GG IV+ L+ +T + I IG V E+R++T+
Sbjct: 309 QEVSFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPLVAECEDRLITIA------- 361
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS--DGGHQVTAKLLVPSDQIGCVIGKG 158
A E+ + SPAQ A V R I + DS + G VT +L+VPS Q+GC+IGKG
Sbjct: 362 ASENPESRYSPAQKAAVLVFSRSIEVGFEKELDSGLNKGSTVTVRLVVPSSQVGCLIGKG 421
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G IV IR TGA IRI+ + +P CA +D++VQISGE S V+ AL RL DN
Sbjct: 422 GVIVSEIRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALYNATGRLRDN 478
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 118/205 (57%), Gaps = 8/205 (3%)
Query: 18 YADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
+ +GP+KR + P +R LC +IG +IG+ G ++K L+ T +KIR
Sbjct: 20 FPPNGPSKRSRQSKPPPPLSVPPGHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIR 79
Query: 78 IGETVPGSEERVVTVYS-ASDETNAFEDGDKFV--SPAQDALFKVHDRV--IAEELRGDE 132
I + S +RV+ V + A+ ++ V S AQ+AL KV DR+ +A E+ G +
Sbjct: 80 IEDAPQESPDRVILVIADAALSCKVLLRNEEVVEVSKAQEALLKVFDRILEVAAEMEGVD 139
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
D ++ +L+ S Q G VIGKGG++V+ I+ ETG +IR+L D+ LP CA SDE++
Sbjct: 140 VGD--RVMSCRLVADSAQAGSVIGKGGKVVERIKKETGCKIRVLTDD-LPLCASASDEMI 196
Query: 193 QISGEASVVKKALCQIASRLHDNPS 217
+I G S VKKAL ++ RL D PS
Sbjct: 197 EIEGRVSSVKKALVAVSQRLQDCPS 221
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 19/176 (10%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD------------CLI 331
+ RL+C + IGGVIGK G++I ++Q +GA I+++ + E D C +
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSCKV 104
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIER----DSGLISFTTRLLVPTSRIGCLIGK 387
+ ++E E +S EA++++ R E D G + RL+ +++ G +IGK
Sbjct: 105 LLRNEEVVE--VSKAQEALLKVFDRILEVAAEMEGVDVGDRVMSCRLVADSAQAGSVIGK 162
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
GG ++ +++ T IR+L ++LP AS DEM++I G + K AL+ V RL+
Sbjct: 163 GGKVVERIKKETGCKIRVL-TDDLPLCASASDEMIEIEGRVSSVKKALVAVSQRLQ 217
>gi|357508127|ref|XP_003624352.1| KH domain-containing protein [Medicago truncatula]
gi|355499367|gb|AES80570.1| KH domain-containing protein [Medicago truncatula]
Length = 188
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 100/167 (59%), Gaps = 35/167 (20%)
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+IE V LQ + KI G ++V + IGCLIGKGGSIITEMRRLT++NIRI
Sbjct: 12 SIEVVQLLQEELT-KIGHSMG-----KAVIVAANMIGCLIGKGGSIITEMRRLTRSNIRI 65
Query: 406 LPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPV 465
L KENLPKIAS+DDEMVQ G+V F+PVLPYIP
Sbjct: 66 LSKENLPKIASDDDEMVQ---------------------------GSVPGFLPVLPYIPA 98
Query: 466 SENGSDGLNYESRDSKRHGRG--PPYGGYGSSDLAAGDSYGSYGSSQ 510
+G D LNY+SRD KRHGRG G GSSDL GD+YGSY SSQ
Sbjct: 99 PVDGPDVLNYDSRDGKRHGRGHSYSSGYGGSSDLGPGDTYGSYASSQ 145
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+L +E + GH + ++V ++ IGC+IGKGG I+ +R T + IRIL E+LP A
Sbjct: 17 QLLQEELTKIGHSMGKAVIVAANMIGCLIGKGGSIITEMRRLTRSNIRILSKENLPKIAS 76
Query: 187 RSDELVQ 193
DE+VQ
Sbjct: 77 DDDEMVQ 83
>gi|218200638|gb|EEC83065.1| hypothetical protein OsI_28176 [Oryza sativa Indica Group]
gi|222640076|gb|EEE68208.1| hypothetical protein OsJ_26373 [Oryza sativa Japonica Group]
Length = 431
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 123/374 (32%), Positives = 183/374 (48%), Gaps = 68/374 (18%)
Query: 189 DELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSS-----------SGSL 237
D VQI+G+A V+KAL +++ ++ PS+ L +++S+ S S +
Sbjct: 4 DNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPSSNF 63
Query: 238 VGPTAATPIVGIAPL--MG--PYGGYKGDTAGDWSR-----------SLYSAPRDDLSSK 282
P+ A G L +G P+ +A SR Y+ P+ S
Sbjct: 64 YSPSDAAISSGHPSLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPAYNTPK---CSG 120
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E LR++CP IG VIGKGG I IR+ESGA I VD S + ++ +IT++S E +D
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSNEATDDA 180
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
SA +EAV+ LQ + ++ E G + IGCLIGKGGSI+ +MR TKA
Sbjct: 181 KSAAVEAVLLLQSKINDDNE---GKV------------IGCLIGKGGSIVNDMRSKTKAA 225
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF----DREGA------ 452
I I E P+ AS DE+V++ G+++ +DAL+Q++ RLR ++ DR+ +
Sbjct: 226 IYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDDVLRDSVDRQNSEKDGKL 284
Query: 453 -VSTFVPV------LPYIPVSENGSDGLNYESR-DSKRHGRGPPYGG-YGSSDLAAGD-- 501
V+T P+ LP + L Y+ R D +R P+ YG S L A D
Sbjct: 285 TVATTDPLYASSYPLPALLPYRQQITPLGYDHRGDIERGLEVYPHSSLYGYSSLQAIDDG 344
Query: 502 --SYGSYGSSQLGG 513
+ SY S GG
Sbjct: 345 YSAVSSYASKGYGG 358
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 152/343 (44%), Gaps = 72/343 (20%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
+ V R LCP KIG +IG+GG +K +R ++ ++I + ++ EE ++T+ S
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITITSN------ 174
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E D S A +A+ + ++ ++D++G IGC+IGKGG I
Sbjct: 175 -EATDDAKSAAVEAVLLLQSKI-------NDDNEG------------KVIGCLIGKGGSI 214
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V ++RS+T A I I K E P A SDELV++ GE ++ AL QI RL D+
Sbjct: 215 VNDMRSKTKAAIYISKGEK-PRKASSSDELVEVFGEVENLRDALVQIVLRLRDD------ 267
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIA---PLMGPYG------GYKGDTAGDWSRSLY 272
+L ++ +S + P+ + P + PY GY D GD R L
Sbjct: 268 VLRDSVDRQNSEKDGKLTVATTDPLYASSYPLPALLPYRQQITPLGY--DHRGDIERGLE 325
Query: 273 SAPRDDL-------------------SSKEF-----SLRLVCPVANIGGVIGKGGAIINQ 308
P L +SK + + + P + + V+GK G ++
Sbjct: 326 VYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTIPASGLSKVMGKHGTNLDN 385
Query: 309 IRQESGAAIKV--DSSSTEGDDCLI--TVSSKEFFEDTLSATI 347
I + SGA I++ SS G I T K+ E+ + A I
Sbjct: 386 IIKISGAHIEIIESKSSRHGHVARISGTTEQKQSAENLIKAFI 428
>gi|297821485|ref|XP_002878625.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297324464|gb|EFH54884.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 121/437 (27%), Positives = 205/437 (46%), Gaps = 38/437 (8%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA---- 95
P++T R +C IG IIG G +V +LR +T +KI V GS+ VV + +
Sbjct: 22 PDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVN 81
Query: 96 -----SDETNAFEDGDKF------VSPAQDALFKVHDR---VIAEELRGDEDSDGGHQVT 141
+D F G+ VS AQ AL +V +R V+A + G +
Sbjct: 82 KSVLLTDRVGDFSGGEHEDWVTCDVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAY 141
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
+L +QIG V+G GG+ V+ +R +GA IR+L P C +DEL+QI+G+ V
Sbjct: 142 CGILADRNQIGAVLGLGGKNVEWMRRSSGAMIRVLPP---PICGTNTDELIQITGDVLAV 198
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
KKAL +++ + DNP + + I SS+ + P P +
Sbjct: 199 KKALVMVSTCIQDNPPVNGYPQPLCIKAYESSTDG----NSEDPHSEFFPNLRSSVPNAS 254
Query: 262 DTAGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
D+A +R L + + + + ++ +++ GG+IGK G II ++ E+GA+I +
Sbjct: 255 DSASS-NRHLPAVYDEGNGTERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISIG 313
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-------ISFTTR 373
+ + ++T+S++E E S A+ + R E I+ + GL T+
Sbjct: 314 APLKVSGERVVTISARENLESRYSHAQNALALVFARSVE-IDVEKGLRPGLHNGAVVKTK 372
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
LLVP+ L+G G E T A++ I + + SE++ +++I G+ +
Sbjct: 373 LLVPSQFANSLVGNGNR---EAIIATGADVHIPVDNQILEWISENEVVIEIKGEYGHVQK 429
Query: 434 ALIQVMTRLRANLFDRE 450
AL V ++LR NL ++
Sbjct: 430 ALTHVSSKLRENLLPKK 446
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 100/198 (50%), Gaps = 14/198 (7%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
V++ + G IIG+ G I++ L+ +T + I IG + S ERVVT+ +A
Sbjct: 277 VVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISIGAPLKVSGERVVTI-------SAR 329
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRG--DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E+ + S AQ+AL V R + ++ G V KLLVPS ++G G +
Sbjct: 330 ENLESRYSHAQNALALVFARSVEIDVEKGLRPGLHNGAVVKTKLLVPSQFANSLVGNGNR 389
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN--PSR 218
+ I + TGA + I D + ++ +++I GE V+KAL ++S+L +N P +
Sbjct: 390 --EAIIA-TGADVHIPVDNQILEWISENEVVIEIKGEYGHVQKALTHVSSKLRENLLPKK 446
Query: 219 SQHLLASAISNSHSSSGS 236
+ + +SN + S+G+
Sbjct: 447 VLGEMRARVSNPYESAGT 464
>gi|359489188|ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 343
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 150/309 (48%), Gaps = 67/309 (21%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH KRR +D ++R + P R+IG +IG+ G ++++R +TK+ I+I
Sbjct: 47 DHRSPKRRAKN----------QDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIA 96
Query: 80 ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG--- 136
+ + EERV+ + S +D + +S A++AL +V ++ E+ D ++D
Sbjct: 97 DAIARHEERVIIISS--------KDSENVISDAENALLQVASLILKED---DSNTDALKV 145
Query: 137 --GHQV--TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR--SDE 190
GH V +LL+ Q GC+IG GQ ++ +R+ +GA I IL LP CA SD
Sbjct: 146 GVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDR 205
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+VQISG+ V KAL +I +L +NP R ++ I+
Sbjct: 206 MVQISGDVPAVLKALEEIGCQLRENPPRQ--------------------------VISIS 239
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
P+ P D + + Y +L ++ P +GG+IG+ G+ I++IR
Sbjct: 240 PIYNPNTNRTSQQYLDPASADY-----------VTLNMMIPETLVGGLIGRCGSNISRIR 288
Query: 311 QESGAAIKV 319
ESGA IKV
Sbjct: 289 NESGAMIKV 297
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 16/202 (7%)
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
G G+ A D + +P+ +++ R+V P IG VIGK G+ I +IR+E+
Sbjct: 35 GVIASATGEVADD-----HRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREET 89
Query: 314 GAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSG------- 366
A IK+ + ++ +I +SSK+ E+ +S A++++ ++ + ++
Sbjct: 90 KATIKIADAIARHEERVIIISSKD-SENVISDAENALLQVASLILKEDDSNTDALKVGVG 148
Query: 367 -LISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIAS--EDDEMVQ 423
+++ RLL+ S+ GCLIG G I ++R + A I ILP+ LP AS + D MVQ
Sbjct: 149 HVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQ 208
Query: 424 ISGDLDLAKDALIQVMTRLRAN 445
ISGD+ AL ++ +LR N
Sbjct: 209 ISGDVPAVLKALEEIGCQLREN 230
>gi|212723602|ref|NP_001132277.1| uncharacterized protein LOC100193713 [Zea mays]
gi|194693942|gb|ACF81055.1| unknown [Zea mays]
Length = 510
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/164 (41%), Positives = 106/164 (64%), Gaps = 5/164 (3%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFF 339
++EFS+R++C IG VIGK GA + ++ Q++GA IKV + + LI +SS E
Sbjct: 30 TEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIP 89
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
+ +S IEA++ L + S E+ +TRL+VP+S++GC+IG+GG +IT+MRR T
Sbjct: 90 AEPISPAIEALILLHDKVSAPSEKHHS----STRLVVPSSKVGCIIGEGGKVITDMRRRT 145
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
A IR+ K + PK S DDE+VQ++G +A+ AL ++ +RLR
Sbjct: 146 GAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRLR 189
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 101/173 (58%), Gaps = 16/173 (9%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASDET 99
E+ R LC IGS+IG+ G V+++ T ++I++ E S ER++ + +S+E
Sbjct: 31 EEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIII--SSNEI 88
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A + +SPA +AL +HD+V A + H + +L+VPS ++GC+IG+GG
Sbjct: 89 PA-----EPISPAIEALILLHDKVSAPSEK--------HHSSTRLVVPSSKVGCIIGEGG 135
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+++ ++R TGA+IR+ P DELVQ++G ++ + AL +IASRL
Sbjct: 136 KVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIASRL 188
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 5/97 (5%)
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
+G T L +P S +G ++G GG + E+R+++ A +R+ A + +V+I
Sbjct: 416 TGRFLSTIELRIPNSSLGSIVGAGGVNLAEIRQVSGARLRLHEAH-----AGSSESVVEI 470
Query: 425 SGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
G LD AK A + + AN ++ S+ +P+ P
Sbjct: 471 QGTLDQAKAAQSLLQGFISANSRQQQQPYSSRMPLYP 507
>gi|297734587|emb|CBI16638.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/309 (30%), Positives = 150/309 (48%), Gaps = 67/309 (21%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH KRR +D ++R + P R+IG +IG+ G ++++R +TK+ I+I
Sbjct: 47 DHRSPKRRAKN----------QDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIA 96
Query: 80 ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG--- 136
+ + EERV+ + S +D + +S A++AL +V ++ E+ D ++D
Sbjct: 97 DAIARHEERVIIISS--------KDSENVISDAENALLQVASLILKED---DSNTDALKV 145
Query: 137 --GHQV--TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR--SDE 190
GH V +LL+ Q GC+IG GQ ++ +R+ +GA I IL LP CA SD
Sbjct: 146 GVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDR 205
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+VQISG+ V KAL +I +L +NP R ++ I+
Sbjct: 206 MVQISGDVPAVLKALEEIGCQLRENPPRQ--------------------------VISIS 239
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
P+ P D + + Y +L ++ P +GG+IG+ G+ I++IR
Sbjct: 240 PIYNPNTNRTSQQYLDPASADY-----------VTLNMMIPETLVGGLIGRCGSNISRIR 288
Query: 311 QESGAAIKV 319
ESGA IKV
Sbjct: 289 NESGAMIKV 297
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 107/202 (52%), Gaps = 16/202 (7%)
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
G G+ A D + +P+ +++ R+V P IG VIGK G+ I +IR+E+
Sbjct: 35 GVIASATGEVADD-----HRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREET 89
Query: 314 GAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSG------- 366
A IK+ + ++ +I +SSK+ E+ +S A++++ ++ + ++
Sbjct: 90 KATIKIADAIARHEERVIIISSKD-SENVISDAENALLQVASLILKEDDSNTDALKVGVG 148
Query: 367 -LISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIAS--EDDEMVQ 423
+++ RLL+ S+ GCLIG G I ++R + A I ILP+ LP AS + D MVQ
Sbjct: 149 HVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQ 208
Query: 424 ISGDLDLAKDALIQVMTRLRAN 445
ISGD+ AL ++ +LR N
Sbjct: 209 ISGDVPAVLKALEEIGCQLREN 230
>gi|168039902|ref|XP_001772435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676232|gb|EDQ62717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 115/185 (62%), Gaps = 10/185 (5%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV 90
D ++ P D V+R + P++K+G IIGR GE VK++ +T+S+I+I E VPG+ ER+V
Sbjct: 1 DGEKKWAGWPGDNVFRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIV 60
Query: 91 TVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI--AEELRGD-EDSDGGHQVTAKLLVP 147
V +A ED + +SPA + L +VH RVI AE D E + GG V+++LLV
Sbjct: 61 MV-------SAREDPEAAISPAMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRLLVA 113
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQ 207
+ Q G +IG+ G +++I+ +GA +R+L E LP CAL D +V++ G+ V++A+
Sbjct: 114 ATQAGSLIGRQGATIKSIQDTSGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMEL 173
Query: 208 IASRL 212
+ S L
Sbjct: 174 VVSHL 178
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 95/171 (55%), Gaps = 7/171 (4%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +GG+IG+ G + ++ +E+ + IK+ + ++ VS++E E +S
Sbjct: 15 FRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP 74
Query: 346 TIEAVVRLQPRCSEKIERDS-------GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
+E ++R+ R E E +S G ++RLLV ++ G LIG+ G+ I ++
Sbjct: 75 AMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDT 134
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ AN+R+LP E LP A DD +V++ GD + A+ V++ LR L DR
Sbjct: 135 SGANVRVLPAEELPLCALADDRVVEVQGDPRNVQRAMELVVSHLRKFLVDR 185
>gi|297596401|ref|NP_001042525.2| Os01g0235800 [Oryza sativa Japonica Group]
gi|56783855|dbj|BAD81267.1| HEN4 -like [Oryza sativa Japonica Group]
gi|255673037|dbj|BAF04439.2| Os01g0235800 [Oryza sativa Japonica Group]
Length = 449
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 161/298 (54%), Gaps = 10/298 (3%)
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
+ +++ +IR+ KD+ LP CAL DEL QI+GE V+K L +A L +P + +L
Sbjct: 1 MSTDSCCEIRVSKDK-LPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKESDVLG 59
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAP-LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKE 283
+ NS SS P P G+ P L P+ G ++ +L + +
Sbjct: 60 A--HNSGSSRSFFNQPDVLPP--GMQPNLHLPFQGPNVAHLPNFPEALMHG-HGSVPPEP 114
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+ RL+C +GG+IGKGG I I+ ++G IKV + + +D ++ +S D +
Sbjct: 115 LTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGI 174
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S A++ +Q + G RL+V +++GCL+GKGGSII EMR+L+ A+I
Sbjct: 175 SPAQNAILHVQRKIVPTSNTKEG--PAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHI 232
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
+L K+ +PK E+DE+VQISG + ++AL+Q+ RLR +LF R+ ST V P
Sbjct: 233 IVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF-RDRMASTVPNVQP 289
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 117/203 (57%), Gaps = 16/203 (7%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+ PE +R LC K+G IIG+GG +K ++ DT +I++ +TVP SE+R+V + +
Sbjct: 110 VPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPA- 168
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
GD +SPAQ+A+ V +++ ++ G + +L+V +Q+GC++GK
Sbjct: 169 -----HPGDG-ISPAQNAILHVQRKIVPTS-----NTKEGPAI-CRLIVSPNQVGCLLGK 216
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG I+ +R +GA I +L + +P +DE+VQISG + +++AL QI +RL ++
Sbjct: 217 GGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEAIQEALMQITARLRNHLF 276
Query: 218 RSQHLLASAISNSHSSSGSLVGP 240
R + +AS + N G LV P
Sbjct: 277 RDR--MASTVPNVQPPFG-LVDP 296
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 144/277 (51%), Gaps = 29/277 (10%)
Query: 190 ELVQISGEASVVKKALCQIASRLHDNPSR--------------SQHLLASAISNSHSSSG 235
++QI G+ VKKAL ++ RL D P+ Q L + G
Sbjct: 122 NVLQIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRG 181
Query: 236 SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANI 295
S++ P + I Y + + R P+ S +E +++C +
Sbjct: 182 SVLPPIPSNTIS--------YASGSRPLSINTERISTLDPKT--SQQEVIFKILCSNDRV 231
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQP 355
GGVIGKGG I+ ++ E+GA+I V + E D+ LIT+++ E E S V+ +
Sbjct: 232 GGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFN 291
Query: 356 RCSEK-IER--DSGLI--SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
R E IE+ DSG + RL+VP++++GCL+GKGG+II+EMR+ + A IRI+ +
Sbjct: 292 RSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQ 351
Query: 411 LPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
+PK ASE+D++VQISG+ +D L + RLR NLF
Sbjct: 352 VPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLF 388
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 114/191 (59%), Gaps = 8/191 (4%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +++ LC ++G +IG+GG IVK L+ + + I +G V +ER++T+
Sbjct: 218 QEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITI-------T 270
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEEL-RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A E+ + SPAQ+ + V +R I + +G + G V+A+L+VPS+Q+GC++GKGG
Sbjct: 271 ASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGG 330
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
I+ +R +GA IRI+ + +P CA +D++VQISGE V+ L I RL DN S
Sbjct: 331 TIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPS 390
Query: 220 QHLLASAISNS 230
+ L + I +S
Sbjct: 391 KTLNGAGIRSS 401
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/281 (33%), Positives = 147/281 (52%), Gaps = 19/281 (6%)
Query: 186 LRSD--ELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
LR D EL QI G+ + VKKAL ++ RL D P + + + S + P +
Sbjct: 2 LRKDCLELYQIEGQLTSVKKALIAVSHRLQDCPPPDRTKMTGSRHYEVVQSETFSVPLES 61
Query: 244 TPIVGI-------APLMGPYGGYKGDTAGDWSRSL----YSAPRDDLSSKEFSLRLVCPV 292
+ I + L G+ +G S SA +E + R++C
Sbjct: 62 LTNLHIDHHLQRSSTLSTLSNRSNGNASGAHKLSAEVNRVSALDPKAYQQEVTFRIICSN 121
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+G VIGKGG+I+ ++ ESGA I V S E +D L+T+++ E E T S +AVV
Sbjct: 122 DRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASENPESTYSPAQKAVVL 181
Query: 353 LQPRCSEK-IERDSGLIS-----FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+ + E +E+ L S T RL+VP++++GCL+GKGG+I++EMR+ T ANIR++
Sbjct: 182 VFSKSVEAGVEKGLELGSKKEPYVTARLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVI 241
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
+ +P S++D++VQISG + A+ RLR +LF
Sbjct: 242 GNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRDHLF 282
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 160/316 (50%), Gaps = 37/316 (11%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +R +C ++G++IG+GG IV+ L+ ++ + I +G ++ E+R+VT+
Sbjct: 111 QEVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTI-------T 163
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEEL-RGDE-DSDGGHQVTAKLLVPSDQIGCVIGKG 158
A E+ + SPAQ A+ V + + + +G E S VTA+L+VPS+Q+GC++GKG
Sbjct: 164 ASENPESTYSPAQKAVVLVFSKSVEAGVEKGLELGSKKEPYVTARLVVPSNQVGCLLGKG 223
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G IV +R TGA IR++ ++ +P C +D+LVQISG S V+ A+ RL D
Sbjct: 224 GAIVSEMRKATGANIRVIGNDQVPMCVSDNDQLVQISGVFSNVQAAIHNATGRLRD---- 279
Query: 219 SQHLLAS-------------------AISNSHS-SSGSLVGPTAATPIVGIAPLMGPYGG 258
HL S ++ SHS + SL G A + GI G G
Sbjct: 280 --HLFVSTQNSGGARSLSSVLAGGQPTLAISHSLNRHSLPGLQAPQTVAGINS-RGTNGV 336
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
+G + L S + + + ++++V P IG V G+ G+ + ++RQ SGA +
Sbjct: 337 SRGLISRKGGLELISGSKTAIVTNT-TVQIVVPDDVIGSVYGENGSNLARLRQISGAKVI 395
Query: 319 VDSSSTEGDDCLITVS 334
V D I +S
Sbjct: 396 VHEPRPGTSDRTIIIS 411
>gi|9759415|dbj|BAB09870.1| unnamed protein product [Arabidopsis thaliana]
Length = 833
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 119/201 (59%), Gaps = 17/201 (8%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G T+ EER++ V
Sbjct: 447 VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAV----- 501
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVI 155
A E+ + SPAQ A+ + R+ EL ++ D G + +TA+L+VP+ QIGCV+
Sbjct: 502 --TASENPECQSSPAQKAIMLIFSRLF--ELATNKILDNGPRSSITARLVVPTSQIGCVL 557
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG IV +R TGA I+ILK E P C +D++VQI+GE V++A+ I SRL D+
Sbjct: 558 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
Query: 216 PSRSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 618 ------VFSNSMKNSLAKSSS 632
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 108/174 (62%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 446 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASE 505
Query: 338 FFEDTLSATIEAVV----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ RL + KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 506 NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVS 565
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D++VQI+G+ ++A+ + +RLR ++F
Sbjct: 566 EMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVF 619
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 104/184 (56%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D + +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 105 GDK--------------FVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
G VS AQ AL KV + + AE DSD V +LL S
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 160
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V++ G A VKKAL I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISR 219
Query: 211 RLHD 214
L +
Sbjct: 220 CLQN 223
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL- 343
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ + D +IT+ ++ + +
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 344 --------------------SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
S A++++ + + + D + RLL +S G
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSD----TVVCRLLTESSHAGA 163
Query: 384 LIGKGGSIITEMRRLT--KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+IGKGG ++ +R+ T K +IRI ENLP A DDEMV++ G+ K AL+ +
Sbjct: 164 VIGKGGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 66/190 (34%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
G V K+L ++ G VIG GG++V+ + SETGA I + L C R L+ ++
Sbjct: 448 GNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV--GNTLDDCEER---LIAVT 502
Query: 196 G------EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
++S +KA+ I SRL + LA+
Sbjct: 503 ASENPECQSSPAQKAIMLIFSRLFE--------LAT------------------------ 530
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
++ L + PR +++ RLV P + IG V+GKGG I++++
Sbjct: 531 ------------------NKILDNGPRSSITA-----RLVVPTSQIGCVLGKGGVIVSEM 567
Query: 310 RQESGAAIKV 319
R+ +GAAI++
Sbjct: 568 RKTTGAAIQI 577
>gi|42573788|ref|NP_974990.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010500|gb|AED97883.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 824
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 119/201 (59%), Gaps = 17/201 (8%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G T+ EER++ V
Sbjct: 447 VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAV----- 501
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVI 155
A E+ + SPAQ A+ + R+ EL ++ D G + +TA+L+VP+ QIGCV+
Sbjct: 502 --TASENPECQSSPAQKAIMLIFSRLF--ELATNKILDNGPRSSITARLVVPTSQIGCVL 557
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG IV +R TGA I+ILK E P C +D++VQI+GE V++A+ I SRL D+
Sbjct: 558 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
Query: 216 PSRSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 618 ------VFSNSMKNSLAKSSS 632
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 108/174 (62%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 446 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASE 505
Query: 338 FFEDTLSATIEAVV----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ RL + KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 506 NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVS 565
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D++VQI+G+ ++A+ + +RLR ++F
Sbjct: 566 EMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVF 619
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D + +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 105 G--------------DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
G + VS AQ AL KV + + AE DSD V +LL S
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 160
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V++ G A VKKAL I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISR 219
Query: 211 RLHD 214
L +
Sbjct: 220 CLQN 223
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL- 343
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ + D +IT+ ++ + +
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 344 --------------------SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
S A++++ + + + D + RLL +S G
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSD----TVVCRLLTESSHAGA 163
Query: 384 LIGKGGSIITEMRRLT--KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+IGKGG ++ +R+ T K +IRI ENLP A DDEMV++ G+ K AL+ +
Sbjct: 164 VIGKGGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 66/190 (34%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
G V K+L ++ G VIG GG++V+ + SETGA I + L C R L+ ++
Sbjct: 448 GNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV--GNTLDDCEER---LIAVT 502
Query: 196 G------EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
++S +KA+ I SRL + LA+
Sbjct: 503 ASENPECQSSPAQKAIMLIFSRLFE--------LAT------------------------ 530
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
++ L + PR +++ RLV P + IG V+GKGG I++++
Sbjct: 531 ------------------NKILDNGPRSSITA-----RLVVPTSQIGCVLGKGGVIVSEM 567
Query: 310 RQESGAAIKV 319
R+ +GAAI++
Sbjct: 568 RKTTGAAIQI 577
>gi|334188619|ref|NP_001190612.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010502|gb|AED97885.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 866
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 119/201 (59%), Gaps = 17/201 (8%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G T+ EER++ V
Sbjct: 447 VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAV----- 501
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVI 155
A E+ + SPAQ A+ + R+ EL ++ D G + +TA+L+VP+ QIGCV+
Sbjct: 502 --TASENPECQSSPAQKAIMLIFSRLF--ELATNKILDNGPRSSITARLVVPTSQIGCVL 557
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG IV +R TGA I+ILK E P C +D++VQI+GE V++A+ I SRL D+
Sbjct: 558 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
Query: 216 PSRSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 618 ------VFSNSMKNSLAKSSS 632
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 108/174 (62%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 446 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASE 505
Query: 338 FFEDTLSATIEAVV----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ RL + KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 506 NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVS 565
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D++VQI+G+ ++A+ + +RLR ++F
Sbjct: 566 EMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVF 619
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D + +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 105 G--------------DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
G + VS AQ AL KV + + AE DSD V +LL S
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 160
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V++ G A VKKAL I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISR 219
Query: 211 RLHD 214
L +
Sbjct: 220 CLQN 223
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL- 343
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ + D +IT+ ++ + +
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 344 --------------------SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
S A++++ + + + D + RLL +S G
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSD----TVVCRLLTESSHAGA 163
Query: 384 LIGKGGSIITEMRRLT--KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+IGKGG ++ +R+ T K +IRI ENLP A DDEMV++ G+ K AL+ +
Sbjct: 164 VIGKGGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 66/190 (34%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
G V K+L ++ G VIG GG++V+ + SETGA I + L C R L+ ++
Sbjct: 448 GNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV--GNTLDDCEER---LIAVT 502
Query: 196 G------EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
++S +KA+ I SRL + LA+
Sbjct: 503 ASENPECQSSPAQKAIMLIFSRLFE--------LAT------------------------ 530
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
++ L + PR +++ RLV P + IG V+GKGG I++++
Sbjct: 531 ------------------NKILDNGPRSSITA-----RLVVPTSQIGCVLGKGGVIVSEM 567
Query: 310 RQESGAAIKV 319
R+ +GAAI++
Sbjct: 568 RKTTGAAIQI 577
>gi|22328051|ref|NP_201244.2| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010501|gb|AED97884.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 857
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/201 (37%), Positives = 119/201 (59%), Gaps = 17/201 (8%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G T+ EER++ V
Sbjct: 447 VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAV----- 501
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVI 155
A E+ + SPAQ A+ + R+ EL ++ D G + +TA+L+VP+ QIGCV+
Sbjct: 502 --TASENPECQSSPAQKAIMLIFSRLF--ELATNKILDNGPRSSITARLVVPTSQIGCVL 557
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG IV +R TGA I+ILK E P C +D++VQI+GE V++A+ I SRL D+
Sbjct: 558 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
Query: 216 PSRSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 618 ------VFSNSMKNSLAKSSS 632
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 108/174 (62%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 446 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASE 505
Query: 338 FFEDTLSATIEAVV----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ RL + KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 506 NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVS 565
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D++VQI+G+ ++A+ + +RLR ++F
Sbjct: 566 EMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDSVF 619
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D + +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 105 G--------------DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
G + VS AQ AL KV + + AE DSD V +LL S
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 160
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V++ G A VKKAL I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISR 219
Query: 211 RLHD 214
L +
Sbjct: 220 CLQN 223
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL- 343
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ + D +IT+ ++ + +
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 344 --------------------SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
S A++++ + + + D + RLL +S G
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSD----TVVCRLLTESSHAGA 163
Query: 384 LIGKGGSIITEMRRLT--KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+IGKGG ++ +R+ T K +IRI ENLP A DDEMV++ G+ K AL+ +
Sbjct: 164 VIGKGGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 66/190 (34%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
G V K+L ++ G VIG GG++V+ + SETGA I + L C R L+ ++
Sbjct: 448 GNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV--GNTLDDCEER---LIAVT 502
Query: 196 G------EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
++S +KA+ I SRL + LA+
Sbjct: 503 ASENPECQSSPAQKAIMLIFSRLFE--------LAT------------------------ 530
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
++ L + PR +++ RLV P + IG V+GKGG I++++
Sbjct: 531 ------------------NKILDNGPRSSITA-----RLVVPTSQIGCVLGKGGVIVSEM 567
Query: 310 RQESGAAIKV 319
R+ +GAAI++
Sbjct: 568 RKTTGAAIQI 577
>gi|124359392|gb|ABN05856.1| KH, type 1 [Medicago truncatula]
Length = 564
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
+E + +++C IGGVIGKGG II ++ E+GA + V S E +D LIT+++ E E
Sbjct: 127 QEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPES 186
Query: 342 TLSATIEAVVRLQPRCSEK-IER--DSGL---ISFTTRLLVPTSRIGCLIGKGGSIITEM 395
S +A V + R E IE+ DSGL S T +L+V ++++GCL+GKGG I++EM
Sbjct: 187 RYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEM 246
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
R+ T A+IRI+ + + K AS++D++VQISG+ +DAL RLR NLF
Sbjct: 247 RKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNLF 298
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 104/177 (58%), Gaps = 9/177 (5%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ ++ +C +IG +IG+GG I++ L+ +T + + +G +V E+R++T+
Sbjct: 127 QEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITI-------T 179
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS--DGGHQVTAKLLVPSDQIGCVIGKG 158
A E + SPAQ A V R + + DS + G VTA+L+V S+Q+GC++GKG
Sbjct: 180 ASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKG 239
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G IV +R TGA IRI+ + + CA +D++VQISGE S V+ AL RL DN
Sbjct: 240 GVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDN 296
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 143/276 (51%), Gaps = 29/276 (10%)
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSR--------------SQHLLASAISNSHSSSGS 236
++ I G+ VKKAL ++ RL D P+ Q L + GS
Sbjct: 139 MIIIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQQSLPDPRVDLFQQRGS 198
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
++ P + I Y + + R P+ S +E +++C +G
Sbjct: 199 VLPPIPSNTI--------SYASGSRPLSINTERISTLDPKT--SQQEVIFKILCSNDRVG 248
Query: 297 GVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR 356
GVIGKGG I+ ++ E+GA+I V + E D+ LIT+++ E E S V+ + R
Sbjct: 249 GVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNR 308
Query: 357 CSEK-IER--DSGLI--SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENL 411
E IE+ DSG + RL+VP++++GCL+GKGG+II+EMR+ + A IRI+ + +
Sbjct: 309 SIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQV 368
Query: 412 PKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
PK ASE+D++VQISG+ +D L + RLR NLF
Sbjct: 369 PKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLF 404
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 114/191 (59%), Gaps = 8/191 (4%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ +++ LC ++G +IG+GG IVK L+ + + I +G V +ER++T+
Sbjct: 234 QEVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITI-------T 286
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEEL-RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A E+ + SPAQ+ + V +R I + +G + G V+A+L+VPS+Q+GC++GKGG
Sbjct: 287 ASENPESRYSPAQNGVILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGG 346
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
I+ +R +GA IRI+ + +P CA +D++VQISGE V+ L I RL DN S
Sbjct: 347 TIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLYHITGRLRDNLFPS 406
Query: 220 QHLLASAISNS 230
+ L + I +S
Sbjct: 407 KTLNGAGIRSS 417
>gi|297794027|ref|XP_002864898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310733|gb|EFH41157.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 115/199 (57%), Gaps = 13/199 (6%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G T+ EER++ V
Sbjct: 455 VGNQDVVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAV----- 509
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
A E+ + SPAQ A+ + R+ + D+ +TA+L+VP+ QIGCV+GK
Sbjct: 510 --TAPENPECQSSPAQKAIMLLFSRLFELSTKKILDNGPRTSITARLVVPTSQIGCVLGK 567
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG IV +R TGA I+ILK E P C +D+++QI+GE V++A+ I SRL D+
Sbjct: 568 GGVIVSEMRKTTGATIQILKVEQNPKCVSENDQVIQITGEFPNVREAIFHITSRLRDS-- 625
Query: 218 RSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 626 ----VFSNSMKNSITKSSS 640
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 108/174 (62%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 454 EVGNQDVVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAVTAPE 513
Query: 338 FFEDTLSATIEAVVRLQPRCSE----KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ L R E KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 514 NPECQSSPAQKAIMLLFSRLFELSTKKILDNGPRTSITARLVVPTSQIGCVLGKGGVIVS 573
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D+++QI+G+ ++A+ + +RLR ++F
Sbjct: 574 EMRKTTGATIQILKVEQNPKCVSENDQVIQITGEFPNVREAIFHITSRLRDSVF 627
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 105/184 (57%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D + +
Sbjct: 47 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVKL 106
Query: 105 G--------------DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
G + VS AQ AL KV + + AE DSD V +LL S
Sbjct: 107 GVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 158
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V+I G A VKKAL I+
Sbjct: 159 AGAVIGKGGQMVGSIRKETGCKISI-RTENLPICADTDDEMVEIEGNAIAVKKALVSISR 217
Query: 211 RLHD 214
L +
Sbjct: 218 CLQN 221
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 26/175 (14%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLS 344
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ D +IT+ ++ + +
Sbjct: 46 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVK 105
Query: 345 ATIE---------------------AVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
+ A++++ + + + D + RLL +S G
Sbjct: 106 LGVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSD----TVVCRLLTESSHAGA 161
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+IGKGG ++ +R+ T I I ENLP A DDEMV+I G+ K AL+ +
Sbjct: 162 VIGKGGQMVGSIRKETGCKISIR-TENLPICADTDDEMVEIEGNAIAVKKALVSI 215
>gi|357445989|ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482320|gb|AES63523.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 766
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
+E + +++C IGGVIGKGG II ++ E+GA + V S E +D LIT+++ E E
Sbjct: 329 QEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPES 388
Query: 342 TLSATIEAVVRLQPRCSEK-IER--DSGL---ISFTTRLLVPTSRIGCLIGKGGSIITEM 395
S +A V + R E IE+ DSGL S T +L+V ++++GCL+GKGG I++EM
Sbjct: 389 RYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEM 448
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
R+ T A+IRI+ + + K AS++D++VQISG+ +DAL RLR NLF
Sbjct: 449 RKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDNLF 500
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 110/393 (27%), Positives = 179/393 (45%), Gaps = 73/393 (18%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE- 103
+R LC +IG +IG+ G ++K L++ T +KIRI ++ S +RV+ V AS+
Sbjct: 50 FRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKVMV 109
Query: 104 -----DGDKF-VSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
DG+ VS AQ+AL +V DR+ +A E+ G E D V+ +L+ S Q G VI
Sbjct: 110 RSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGD--RTVSCRLVADSAQAGSVI 167
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG++V+ I+ +TG +I + KD +LP+C DE+++I G S VKKAL ++ L D
Sbjct: 168 GKGGKVVEKIKKDTGCKIWVCKD-NLPACISSPDEVIEIEGSVSSVKKALVAVSRNLQD- 225
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
+H H+ + G + I + G +L S P
Sbjct: 226 ----RH---------HADRTKMTGQNSHEVI------------HHEALVGVPRETLMSVP 260
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
R+ IG + + E+ + VD I SS
Sbjct: 261 RETF-------------------IGAPRETLTAVPCETLTDLHVDHLLQRRSALSILPSS 301
Query: 336 KEFFE---DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ +LSA + V L+P+ ++ T +++ RIG +IGKGG+II
Sbjct: 302 SNSYATGVHSLSAEVNRVSSLEPKAHQQ--------EITFKIICSNDRIGGVIGKGGNII 353
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
++ T A + + P +A +D ++ I+
Sbjct: 354 RALQSETGATVSV-----GPSVAECEDRLITIT 381
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 104/177 (58%), Gaps = 9/177 (5%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++ ++ +C +IG +IG+GG I++ L+ +T + + +G +V E+R++T+
Sbjct: 329 QEITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITI-------T 381
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS--DGGHQVTAKLLVPSDQIGCVIGKG 158
A E + SPAQ A V R + + DS + G VTA+L+V S+Q+GC++GKG
Sbjct: 382 ASESPESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKG 441
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G IV +R TGA IRI+ + + CA +D++VQISGE S V+ AL RL DN
Sbjct: 442 GVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALYNATGRLRDN 498
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 23/188 (12%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ RL+C + IGGVIGK G +I ++ +GA I+++ S E D +I V +
Sbjct: 47 HVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGK 106
Query: 343 --------------LSATIEAVVRLQPRCSEKIERDSGL----ISFTTRLLVPTSRIGCL 384
+S EA++R+ R E G+ + + RL+ +++ G +
Sbjct: 107 VMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSAQAGSV 166
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
IGKGG ++ ++++ T I + K+NLP S DE+++I G + K AL+ V
Sbjct: 167 IGKGGKVVEKIKKDTGCKIWVC-KDNLPACISSPDEVIEIEGSVSSVKKALVAV----SR 221
Query: 445 NLFDREGA 452
NL DR A
Sbjct: 222 NLQDRHHA 229
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 41/183 (22%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
GH V +LL S +IG VIGK G +++N++ TGA+IRI E P+ + D ++ + G
Sbjct: 46 GH-VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRI---EDSPNES--PDRVIMVIG 99
Query: 197 EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY 256
+++ K + RS AI S + L I+ +A M
Sbjct: 100 ASNIDGKVMV-----------RSHSGDGEAIEVSKAQEALL---RVFDRILEVAAEM--- 142
Query: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
+G GD + S RLV A G VIGKGG ++ +I++++G
Sbjct: 143 ---EGIELGD---------------RTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGCK 184
Query: 317 IKV 319
I V
Sbjct: 185 IWV 187
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 112/177 (63%), Gaps = 11/177 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R + P++K+G IIGR GE VK++ +T+S+I+I E VPG+ ER+V V
Sbjct: 7 PGDNVFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMV------- 59
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI--AEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIG 156
+A ED + +SPA + L +VH RVI AE D E + GG V+++LLV + Q G +IG
Sbjct: 60 SAREDPEAAISPAMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIG 119
Query: 157 KGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ G +++I+ +GA +R+L E LP CAL D +V+++GE V++A + + L
Sbjct: 120 RQGATIKSIQDSSGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHL 176
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 16/200 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +GG+IG+ G + ++ +E+ + IK+ + ++ VS++E E +S
Sbjct: 12 FRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP 71
Query: 346 TIEAVVRLQPRCSEKIERDS-------GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
+E ++R+ R E E +S G ++RLLV ++ G LIG+ G+ I ++
Sbjct: 72 AMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDS 131
Query: 399 TKANIRILP-KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
+ A +R+LP E LP A DD +V+++G+ + A V+ LR L DR
Sbjct: 132 SGATVRVLPAAEELPLCALADDRVVEVTGEPRNVQRATELVVAHLRKFLVDRS------- 184
Query: 458 PVLPYIPVSENGSDGLNYES 477
VLP ++ ++ N +S
Sbjct: 185 -VLPLFELNRAVANQSNQQS 203
>gi|4314357|gb|AAD15568.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 649
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 205/443 (46%), Gaps = 50/443 (11%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA---- 95
P++T R +C IG IIG G +V +LR +T +KI V GS+ VV + +
Sbjct: 22 PDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVN 81
Query: 96 -----SDETNAFEDGDK------FVSPAQDALFKVHDR---VIAEELRGDEDSDGGHQVT 141
+D F G+ VS AQ AL +V +R V+A + G +
Sbjct: 82 QSILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAY 141
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
+L +QIG V+G GG+ V+ +R +GA IR+L P C ++DEL+QI+G+ V
Sbjct: 142 CGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP---PICGTKNDELIQITGDVLAV 198
Query: 202 KKALCQIASRLHDNPSRSQHLLASAIS--NSHSSSGSLVGP-TAATPIVGIAPLMGPYGG 258
KKAL ++S + +N + + +I S S+ G+ P + P + + L
Sbjct: 199 KKALVMVSSYIQNNAPLNGYPPPLSIKGYESLSTDGNSEDPHSEFFPNLRSSSL------ 252
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKE----FSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
A + S P D +S E F + VA GG+IGK G II ++ E+G
Sbjct: 253 ---SNATEIVASNRHLPYDGGNSTERKVVFKIIFTSVVA--GGIIGKQGTIIRALQNETG 307
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL------- 367
A+I V + + ++TVS++E E S A+ + R E I+ + GL
Sbjct: 308 ASISVGAPLKVSGERVVTVSARENLESRYSHAQNALALVFARSVE-IDVEKGLRPGLHNG 366
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
T+LLVP+ G G E T A++ I + + SE++ +++I G+
Sbjct: 367 AIVKTKLLVPSHFANSFNGNGNR---EAIIATGADVHISVGNQVLEWISENEVVIEIKGE 423
Query: 428 LDLAKDALIQVMTRLRANLFDRE 450
+ AL V ++LR NL ++
Sbjct: 424 YSHVQKALTHVSSKLRENLLPKK 446
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 96/199 (48%), Gaps = 18/199 (9%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
V++ + G IIG+ G I++ L+ +T + I +G + S ERVVTV +A
Sbjct: 277 VVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTV-------SAR 329
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRG--DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E+ + S AQ+AL V R + ++ G V KLLVPS G G +
Sbjct: 330 ENLESRYSHAQNALALVFARSVEIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGNR 389
Query: 161 --IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN--P 216
I+ TGA + I + ++ +++I GE S V+KAL ++S+L +N P
Sbjct: 390 EAIIA-----TGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLRENLLP 444
Query: 217 SRSQHLLASAISNSHSSSG 235
+ + + +SN + S+G
Sbjct: 445 KKVLGEMRARVSNPYESAG 463
>gi|356536806|ref|XP_003536925.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 561
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 103/174 (59%), Gaps = 8/174 (4%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P + V+R L P++K+GSIIGR GE ++++ DTK++I+I + PG+ ER V V
Sbjct: 159 PGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMV------- 211
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+A E+ D + PA D L +VH +V+ + D S V +LLV Q G +IGK
Sbjct: 212 SAKEEPDCSIPPAVDGLLRVHKQVVNVDPHPADSASGAVRPVVTRLLVADTQAGSLIGKQ 271
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++ + TG IRIL EHLP ALR D +V+I GE+S V KA+ +A L
Sbjct: 272 GSTIKSFQDATGCNIRILGSEHLPVFALRDDSIVEIQGESSGVHKAVELVAIHL 325
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFS----------LRLVCPVANIGGVIGKGGAIINQIR 310
GD ++ P +DL E R++ PV +G +IG+ G I +I
Sbjct: 129 GDVTENFGSEEKRGPEEDLKGGEVKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIRKIT 188
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC----SEKIERDSG 366
+++ A IK+ + + VS+KE + ++ ++ ++R+ + + SG
Sbjct: 189 EDTKARIKILDGPPGTSERAVMVSAKEEPDCSIPPAVDGLLRVHKQVVNVDPHPADSASG 248
Query: 367 LI-SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
+ TRLLV ++ G LIGK GS I + T NIRIL E+LP A DD +V+I
Sbjct: 249 AVRPVVTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSIVEIQ 308
Query: 426 GDLDLAKDALIQVMTRLRANLFDR 449
G+ A+ V LR L DR
Sbjct: 309 GESSGVHKAVELVAIHLRKFLVDR 332
>gi|30681758|ref|NP_850026.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|330252232|gb|AEC07326.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 632
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 128/443 (28%), Positives = 205/443 (46%), Gaps = 50/443 (11%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSA---- 95
P++T R +C IG IIG G +V +LR +T +KI V GS+ VV + +
Sbjct: 22 PDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVN 81
Query: 96 -----SDETNAFEDGDK------FVSPAQDALFKVHDR---VIAEELRGDEDSDGGHQVT 141
+D F G+ VS AQ AL +V +R V+A + G +
Sbjct: 82 QSILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEEAY 141
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
+L +QIG V+G GG+ V+ +R +GA IR+L P C ++DEL+QI+G+ V
Sbjct: 142 CGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP---PICGTKNDELIQITGDVLAV 198
Query: 202 KKALCQIASRLHDNPSRSQHLLASAIS--NSHSSSGSLVGP-TAATPIVGIAPLMGPYGG 258
KKAL ++S + +N + + +I S S+ G+ P + P + + L
Sbjct: 199 KKALVMVSSYIQNNAPLNGYPPPLSIKGYESLSTDGNSEDPHSEFFPNLRSSSL------ 252
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKE----FSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
A + S P D +S E F + VA GG+IGK G II ++ E+G
Sbjct: 253 ---SNATEIVASNRHLPYDGGNSTERKVVFKIIFTSVVA--GGIIGKQGTIIRALQNETG 307
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL------- 367
A+I V + + ++TVS++E E S A+ + R E I+ + GL
Sbjct: 308 ASISVGAPLKVSGERVVTVSARENLESRYSHAQNALALVFARSVE-IDVEKGLRPGLHNG 366
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
T+LLVP+ G G E T A++ I + + SE++ +++I G+
Sbjct: 367 AIVKTKLLVPSHFANSFNGNGNR---EAIIATGADVHISVGNQVLEWISENEVVIEIKGE 423
Query: 428 LDLAKDALIQVMTRLRANLFDRE 450
+ AL V ++LR NL ++
Sbjct: 424 YSHVQKALTHVSSKLRENLLPKK 446
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 14/197 (7%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
V++ + G IIG+ G I++ L+ +T + I +G + S ERVVTV +A
Sbjct: 277 VVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTV-------SAR 329
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRG--DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E+ + S AQ+AL V R + ++ G V KLLVPS G G +
Sbjct: 330 ENLESRYSHAQNALALVFARSVEIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGNR 389
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN--PSR 218
+ I + TGA + I + ++ +++I GE S V+KAL ++S+L +N P +
Sbjct: 390 --EAIIA-TGADVHISVGNQVLEWISENEVVIEIKGEYSHVQKALTHVSSKLRENLLPKK 446
Query: 219 SQHLLASAISNSHSSSG 235
+ + +SN + S+G
Sbjct: 447 VLGEMRARVSNPYESAG 463
>gi|28261405|gb|AAO37829.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 836
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 17/201 (8%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G + EER++ V
Sbjct: 459 VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAV----- 513
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVI 155
A E+ + SPAQ A+ + R+ EL ++ D G + +TA+L+VP+ QIGCV+
Sbjct: 514 --TASENPECQSSPAQKAIMLIFSRLF--ELATNKILDNGPRSSITARLVVPTSQIGCVL 569
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG IV +R TGA I+ILK E P C +D++VQI+ E V++A+ I SRL D+
Sbjct: 570 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDS 629
Query: 216 PSRSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 630 ------VFSNSMKNSLAKSSS 644
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 107/174 (61%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 458 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASE 517
Query: 338 FFEDTLSATIEAVV----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ RL + KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 518 NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVS 577
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D++VQI+ + ++A+ + +RLR ++F
Sbjct: 578 EMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVF 631
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D + +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 105 G--------------DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
G + VS AQ AL KV + + AE DSD V +LL S
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 160
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V++ G A VKKAL I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISR 219
Query: 211 RLHD 214
L +
Sbjct: 220 CLQN 223
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL- 343
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ + D +IT+ ++ + +
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 344 --------------------SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
S A++++ + + + D + RLL +S G
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSD----TVVCRLLTESSHAGA 163
Query: 384 LIGKGGSIITEMRRLT--KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+IGKGG ++ +R+ T K +IRI ENLP A DDEMV++ G+ K AL+ +
Sbjct: 164 VIGKGGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 66/190 (34%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
G V K+L ++ G VIG GG++V+ + SETGA I + L C R L+ ++
Sbjct: 460 GNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV--GNALDDCEER---LIAVT 514
Query: 196 G------EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
++S +KA+ I SRL + LA+
Sbjct: 515 ASENPECQSSPAQKAIMLIFSRLFE--------LAT------------------------ 542
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
++ L + PR +++ RLV P + IG V+GKGG I++++
Sbjct: 543 ------------------NKILDNGPRSSITA-----RLVVPTSQIGCVLGKGGVIVSEM 579
Query: 310 RQESGAAIKV 319
R+ +GAAI++
Sbjct: 580 RKTTGAAIQI 589
>gi|28261403|gb|AAO37828.1| HEN4 [Arabidopsis thaliana]
Length = 869
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/201 (36%), Positives = 117/201 (58%), Gaps = 17/201 (8%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G +D V++ LC G +IG GG++V+ L +T + I +G + EER++ V
Sbjct: 459 VGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAV----- 513
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVI 155
A E+ + SPAQ A+ + R+ EL ++ D G + +TA+L+VP+ QIGCV+
Sbjct: 514 --TASENPECQSSPAQKAIMLIFSRLF--ELATNKILDNGPRSSITARLVVPTSQIGCVL 569
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG IV +R TGA I+ILK E P C +D++VQI+ E V++A+ I SRL D+
Sbjct: 570 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDS 629
Query: 216 PSRSQHLLASAISNSHSSSGS 236
+ ++++ NS + S S
Sbjct: 630 ------VFSNSMKNSLAKSSS 644
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 107/174 (61%), Gaps = 4/174 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ +++C N GGVIG GG ++ + E+GA I V ++ + ++ LI V++ E
Sbjct: 458 EVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASE 517
Query: 338 FFEDTLSATIEAVV----RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
E S +A++ RL + KI + S T RL+VPTS+IGC++GKGG I++
Sbjct: 518 NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVLGKGGVIVS 577
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
EMR+ T A I+IL E PK SE+D++VQI+ + ++A+ + +RLR ++F
Sbjct: 578 EMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDSVF 631
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 105/184 (57%), Gaps = 23/184 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ +G++IG+ G ++KQL+ T +KIR+ E GS +RV+T+ + +D + +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 105 G--------------DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
G + VS AQ AL KV + + AE DSD V +LL S
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAE-----ADSD---TVVCRLLTESSH 160
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G VIGKGGQ+V +IR ETG +I I + E+LP CA DE+V++ G A VKKAL I+
Sbjct: 161 AGAVIGKGGQMVGSIRKETGCKISI-RIENLPICADTDDEMVEVEGNAIAVKKALVSISR 219
Query: 211 RLHD 214
L +
Sbjct: 220 CLQN 223
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL- 343
+ RL+CP++++G VIGK G +I Q++Q +GA I+V+ + D +IT+ ++ + +
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 344 --------------------SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
S A++++ + + + D + RLL +S G
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSD----TVVCRLLTESSHAGA 163
Query: 384 LIGKGGSIITEMRRLT--KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+IGKGG ++ +R+ T K +IRI ENLP A DDEMV++ G+ K AL+ +
Sbjct: 164 VIGKGGQMVGSIRKETGCKISIRI---ENLPICADTDDEMVEVEGNAIAVKKALVSI 217
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 66/190 (34%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
G V K+L ++ G VIG GG++V+ + SETGA I + L C R L+ ++
Sbjct: 460 GNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINV--GNALDDCEER---LIAVT 514
Query: 196 G------EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
++S +KA+ I SRL + LA+
Sbjct: 515 ASENPECQSSPAQKAIMLIFSRLFE--------LAT------------------------ 542
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
++ L + PR +++ RLV P + IG V+GKGG I++++
Sbjct: 543 ------------------NKILDNGPRSSITA-----RLVVPTSQIGCVLGKGGVIVSEM 579
Query: 310 RQESGAAIKV 319
R+ +GAAI++
Sbjct: 580 RKTTGAAIQI 589
>gi|147817258|emb|CAN62067.1| hypothetical protein VITISV_030085 [Vitis vinifera]
Length = 288
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 103/182 (56%), Gaps = 30/182 (16%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS-------- 94
++R LCP K G +IG+GG I++Q R DT +KIRI ++V G +ERV+ + +
Sbjct: 100 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 159
Query: 95 ----ASDETNAFEDG--------------DKFVSPAQDALFKVHDRVIAEELRGDEDSD- 135
E N E+ D SPAQ AL +V +R++ + +E
Sbjct: 160 ASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 219
Query: 136 ---GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
G V +LL PS+Q+GCV+G+GG+IV+ IR E+GAQIR+L +H+P+CA DEL+
Sbjct: 220 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELI 279
Query: 193 QI 194
Q+
Sbjct: 280 QV 281
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 96/184 (52%), Gaps = 41/184 (22%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV------SSKE-- 337
R++CP GGVIGKGGAII Q R+++GA I++D S D+ +I + S +E
Sbjct: 102 FRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREAS 161
Query: 338 -------------------------FFEDTLSATIEAVVRLQPRCSE--------KIERD 364
+D S +A+VR+ R + + + D
Sbjct: 162 AICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKED 221
Query: 365 SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
G ++ RLL P++++GC++G+GG I+ ++R+ + A IR+LPK+++P AS DE++Q+
Sbjct: 222 LGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELIQV 281
Query: 425 SGDL 428
L
Sbjct: 282 VHKL 285
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 34/211 (16%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
QV ++L P+ + G VIGKGG I++ R +TGA+IRI D+ + C + ++ I +A
Sbjct: 99 QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRI--DDSVLGC---DERVILIVADA 153
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLAS-----AISNSHSSSGSLVGPTAATPIVGIAPLM 253
K+ I ++ S +L S A+ + SS A +V + +
Sbjct: 154 VKSKREASAICGAEANDGEESANLRNSSPNPVAVDDDESSP-------AQQALVRVFERI 206
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
K D ++DL + RL+ P +G V+G+GG I+ +IRQES
Sbjct: 207 -----LKVDEE-----REEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQES 256
Query: 314 GAAIKV------DSSSTEGDDCLITVSSKEF 338
GA I+V + ++ GD+ LI V K F
Sbjct: 257 GAQIRVLPKDHIPACASPGDE-LIQVVHKLF 286
>gi|242045198|ref|XP_002460470.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
gi|241923847|gb|EER96991.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
Length = 371
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 112/200 (56%), Gaps = 13/200 (6%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G +IGKGG+ I ++ E+GA IK+ + D+ ++ +S++E + S +AVVR+
Sbjct: 8 VGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAISARENSDMMHSPAQDAVVRVY 67
Query: 355 PRCSE-KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPK 413
R SE ++R S RLLVP+ IGCL+GKGGSIITEMR++T A+IRI E +P+
Sbjct: 68 SRISEASMDRSS---PTPARLLVPSQHIGCLLGKGGSIITEMRKITGASIRIFGNEQIPR 124
Query: 414 IASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPY--IPVSENGSD 471
A +DEMVQ++G +DAL+ + R+R + + P P IPV ++
Sbjct: 125 CAQRNDEMVQVTGSFQSIQDALLHITGRIRDVILPKPHPSGGMPPYPPVGNIPVHQS--- 181
Query: 472 GLNYESRDSKRHGRG--PPY 489
E H G PPY
Sbjct: 182 --RQEPPPPHLHPSGGMPPY 199
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/161 (40%), Positives = 97/161 (60%), Gaps = 13/161 (8%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQ 113
+GSIIG+GG ++ L+ +T + I+I E V S+ERVV + +A E+ D SPAQ
Sbjct: 8 VGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAI-------SARENSDMMHSPAQ 60
Query: 114 DALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
DA+ +V+ R+ + D A+LLVPS IGC++GKGG I+ +R TGA I
Sbjct: 61 DAVVRVYSRI------SEASMDRSSPTPARLLVPSQHIGCLLGKGGSIITEMRKITGASI 114
Query: 174 RILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
RI +E +P CA R+DE+VQ++G ++ AL I R+ D
Sbjct: 115 RIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALLHITGRIRD 155
>gi|384248562|gb|EIE22046.1| hypothetical protein COCSUDRAFT_43031 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/185 (41%), Positives = 105/185 (56%), Gaps = 31/185 (16%)
Query: 24 NKRRYTGDDRD-------QFI---IGPE-DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDT 72
+KRRY DDRD Q I GP+ +TVYR L +K+GS+IG+ G IVK +R +T
Sbjct: 75 SKRRY--DDRDGPPDAKRQAIGAAEGPQTETVYRLLVQSKKVGSVIGKAGTIVKAIRDET 132
Query: 73 KSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDE 132
++IR+ E VP +ERV+ + +A D + AQ+ALFKVH RV E
Sbjct: 133 GARIRVVEGVPNCDERVIVI-------SARSDAARHTDAAQEALFKVHARV-------HE 178
Query: 133 DSDGGH----QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
+G H T ++LV Q GC+IGK G I++ IR +GA I+IL E LP C L +
Sbjct: 179 HEEGPHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIREASGAHIKILPAEDLPPCGLSN 238
Query: 189 DELVQ 193
D +VQ
Sbjct: 239 DRVVQ 243
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E RL+ +G VIGK G I+ IR E+GA I+V D+ +I +S++
Sbjct: 102 ETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVEGVPNCDERVIVISARSDAARH 161
Query: 343 LSATIEAVVRLQPRCSEKIE-RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
A EA+ ++ R E E + TTR+LV ++ GCLIGK G+II E+R + A
Sbjct: 162 TDAAQEALFKVHARVHEHEEGPHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIREASGA 221
Query: 402 NIRILPKENLPKIASEDDEMVQ 423
+I+ILP E+LP +D +VQ
Sbjct: 222 HIKILPAEDLPPCGLSNDRVVQ 243
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 110/176 (62%), Gaps = 11/176 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+GSIIGR GE +K++ +T+++I+I + PG+ ER V V
Sbjct: 149 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMV------- 201
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDED---SDGGHQVTAKLLVPSDQIGCVIG 156
+A E+ D + PA D L +VH R++ + L GD S G +V+ +LLVP+ Q G +IG
Sbjct: 202 SAKEEPDSALPPAMDGLLRVHKRIV-DGLDGDSSHASSGTGTKVSTRLLVPASQAGSLIG 260
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G V++I+ + +R+L E LP AL+ D +V++ G+A+ V KA+ IAS L
Sbjct: 261 KQGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHL 316
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 90/173 (52%), Gaps = 6/173 (3%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I +I +E+ A IK+ + + VS+KE +
Sbjct: 151 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSA 210
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIGKGGSIITEMR 396
L ++ ++R+ R + ++ DS S +TRLLVP S+ G LIGK G + ++
Sbjct: 211 LPPAMDGLLRVHKRIVDGLDGDSSHASSGTGTKVSTRLLVPASQAGSLIGKQGGTVKSIQ 270
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ +R+L E+LP A +DD +V++ GD A+ + + LR L DR
Sbjct: 271 EASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKAVELIASHLRKFLVDR 323
>gi|356504987|ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 529
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 109/184 (59%), Gaps = 8/184 (4%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
G++ ++ P + V+R L P++K+GSIIGR GE +K++ +TK++I+I + PG ER
Sbjct: 113 GNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERA 172
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGGHQVTAKLLVPS 148
V V +A E+ D+ + PA D L +VH +VI + D G V +LLV
Sbjct: 173 VMV-------SAKEEPDRPIPPAIDGLLRVHKQVINVDRDLVDSALAAGRSVVTRLLVAD 225
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
Q G +IGK G +++I+ +G IR+L E+LP ALR D +V+I GE++ V KA+ I
Sbjct: 226 TQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELI 285
Query: 209 ASRL 212
A L
Sbjct: 286 AVHL 289
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ PV +G +IG+ G I +I +E+ A IK+ + + VS+KE +
Sbjct: 125 ENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDRP 184
Query: 343 LSATIEAVVRLQPRCSEKIERD---SGLI---SFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ I+ ++R+ + ++RD S L S TRLLV ++ G LIGK GS I ++
Sbjct: 185 IPPAIDGLLRVHKQVI-NVDRDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQ 243
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ IR+L ENLP A DD +V+I G+ A+ + LR L DR
Sbjct: 244 DGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDR 296
>gi|356572245|ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 528
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 108/184 (58%), Gaps = 8/184 (4%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
G++ ++ P + V+R L P++K+GSIIGR GE +K++ +TK++I+I + PG ER
Sbjct: 112 GNEIKKWPGWPGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERA 171
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGGHQVTAKLLVPS 148
V V +A E+ D + PA D L +VH +VI + D G V +LLV
Sbjct: 172 VMV-------SAKEEPDCPIPPAVDGLLRVHKQVINVDRDLADSALAAGRSVVTRLLVAD 224
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
Q G +IGK G +++I+ +G IR+L E+LP ALR D +V+I GE++ V KA+ I
Sbjct: 225 TQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELI 284
Query: 209 ASRL 212
A L
Sbjct: 285 AVHL 288
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 89/173 (51%), Gaps = 7/173 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ PV +G +IG+ G I +I +E+ A IK+ + + VS+KE +
Sbjct: 124 ENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDCP 183
Query: 343 LSATIEAVVRLQPRCSEKIERD---SGLI---SFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ ++ ++R+ + ++RD S L S TRLLV ++ G LIGK GS I ++
Sbjct: 184 IPPAVDGLLRVHKQVI-NVDRDLADSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQ 242
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ IR+L ENLP A DD +V+I G+ A+ + LR L DR
Sbjct: 243 DGSGCTIRVLGSENLPIFALRDDSIVEIQGESAGVHKAVELIAVHLRKFLVDR 295
>gi|224137186|ref|XP_002327061.1| predicted protein [Populus trichocarpa]
gi|222835376|gb|EEE73811.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 142/291 (48%), Gaps = 59/291 (20%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D ++R + P KIG +IG+ G ++++R DTK+ I+I + V EERV+ + S +E A
Sbjct: 50 DVIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISSKENENGA 109
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS---------DGGHQV--TAKLLVPSDQ 150
+ A++AL ++ + ++ E+ G + GH T +LL+ Q
Sbjct: 110 TD--------AENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHVAANTIRLLIAGSQ 161
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQI 208
G +IG GQ + +R+ +GA I +L LP C A SD +VQISG+ VV KAL +I
Sbjct: 162 AGSLIGMSGQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQISGDVPVVLKALEEI 221
Query: 209 ASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
+L +NP + IS S S + S V P+ Y A D+
Sbjct: 222 GCQLRENPPK------QVISISPSYNYSAV----------------PFQQYAPQAAADY- 258
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
++ ++ P +GG+IG+ G+ I++IR ESGA IKV
Sbjct: 259 ---------------VTMEMMVPETMMGGLIGRSGSNISRIRVESGAVIKV 294
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 16/176 (9%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF------F 339
R+V P IG VIGK G I +IR+++ A IK+ + ++ +I +SSKE
Sbjct: 53 FRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISSKENENGATDA 112
Query: 340 EDTLSATIEAVVRLQPRCSE--------KIERDSGLISFTTRLLVPTSRIGCLIGKGGSI 391
E+ L E ++ S K+ + + T RLL+ S+ G LIG G
Sbjct: 113 ENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHVAANTIRLLIAGSQAGSLIGMSGQN 172
Query: 392 ITEMRRLTKANIRILPKENLPKIAS--EDDEMVQISGDLDLAKDALIQVMTRLRAN 445
I ++R + A I +L LP AS E D +VQISGD+ + AL ++ +LR N
Sbjct: 173 IVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQISGDVPVVLKALEEIGCQLREN 228
>gi|334187557|ref|NP_196518.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004027|gb|AED91410.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 612
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 143/525 (27%), Positives = 237/525 (45%), Gaps = 98/525 (18%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP---------------GS 85
E +R LC + + G +IG+ G +VK+L T+S I + +T P GS
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKT-PLDDSPYRIIKIFGHVGS 86
Query: 86 EERV---VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
RV V V + S+ ++ + VS AQ AL +V + + GD S V+
Sbjct: 87 VSRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFEALNF----GDCTSST---VSC 139
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE-ASVV 201
LL+ + VIGK G+++Q I ETG ++ L+ L C D +++I G S V
Sbjct: 140 NLLMEGSHVVTVIGKNGELMQRILEETGCNVQ-LRSHDLSICTNPGDVVLKIEGNRLSAV 198
Query: 202 KKALCQIASRLHDNPSRSQ-HLLASAISNS-----------------------H---SSS 234
KAL I+SRL P S L A A+ ++ H S
Sbjct: 199 MKALVSISSRLQACPPISTASLHAEAVPDALRRPMEYRSQQYREVDPHGSLHRHVEISQE 258
Query: 235 GSLVGP---TAATPIVGIAPLMGPYGGYKGDTAGDWS-----RSLYSAPRDDLSSKEFSL 286
+LV P T P + P P ++ T+ + + A +DD+ ++ L
Sbjct: 259 DALVRPFFRTITQPRIDYLP--HPSYDHRLITSASKNPPVTIKQPLQASKDDI--RQVDL 314
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSAT 346
+++C + +++ + R + A+I V + D+ L+T+++ E +D S +
Sbjct: 315 KILCS--------NESASVVIKTRSVTDASISVGDRHPDCDERLVTITAFEKTKDITSES 366
Query: 347 IEAVVRLQPRCSEKIER---DSGLIS-FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
A+V + E DSGL S T RL+V +++I CL+G+ G I T +++ T A
Sbjct: 367 QRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEEGRIKTTIQQRTGAF 426
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR------EGAVS-- 454
I +L E PK SE++++VQISG+ ++A+ QV + LR +L ++ + AV+
Sbjct: 427 ITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQSFQRGSQYAVNYS 486
Query: 455 ------TFVPVLPYIPV-----SENGSDGLNYESRDSKRHGRGPP 488
F P Y P + + +D +Y S+ S R PP
Sbjct: 487 EDPFPELFSPTAGYTPTFGRSSTMDPNDIFHYSSQASSRLWESPP 531
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 109/237 (45%), Gaps = 15/237 (6%)
Query: 59 GRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFK 118
+V + R T + I +G+ P +ER+VT+ AFE S +Q AL
Sbjct: 320 NESASVVIKTRSVTDASISVGDRHPDCDERLVTI-------TAFEKTKDITSESQRALVL 372
Query: 119 VHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
V + DS +TA+L+V S+QI C++G+ G+I I+ TGA I +L
Sbjct: 373 VFSNMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEEGRIKTTIQQRTGAFITVLNV 432
Query: 179 EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS--AISNSHSSSGS 236
E P C ++++VQISGE V++A+ Q+ S L ++ S A++ S
Sbjct: 433 EQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQSFQRGSQYAVNYSEDPFPE 492
Query: 237 LVGPTAA-TPIVGIAPLMGPYGGYKGDTAGD---WSRSLYSAPR--DDLSSKEFSLR 287
L PTA TP G + M P + + W +APR +D S FS R
Sbjct: 493 LFSPTAGYTPTFGRSSTMDPNDIFHYSSQASSRLWESPPPAAPRSVNDGSGGLFSTR 549
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 70/178 (39%), Positives = 103/178 (57%), Gaps = 12/178 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R L P + +G IIGR GE VK++ +T+S+I+I E + G+ ER V V
Sbjct: 82 PGDNVFRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMV------- 134
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI--AEELRGD---EDSDGGHQVTAKLLVPSDQIGCV 154
+A E+ + VSPA D + +VH R+I + RG+ G ++ +LLV Q G +
Sbjct: 135 SAKEEPEAPVSPAMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSL 194
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
IG+ G ++ I+ +GA +R+L E LP CAL D LV++ GEA V KA+ I S L
Sbjct: 195 IGRQGATIKAIQEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHL 252
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ P +GG+IG+ G + ++ +E+ + IK+ + + VS+KE E +S
Sbjct: 87 FRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMVSAKEEPEAPVSP 146
Query: 346 TIEAVVRLQPRCSEKIERDSGLI---------SFTTRLLVPTSRIGCLIGKGGSIITEMR 396
++ ++R+ R E G + + +TRLLV ++ G LIG+ G+ I ++
Sbjct: 147 AMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSLIGRQGATIKAIQ 206
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ A +R+L E+LP A DD +V++ G+ A+ +++ LR L DR
Sbjct: 207 EGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVHKAVELIVSHLRKFLVDR 259
>gi|255541092|ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
gi|223548790|gb|EEF50279.1| conserved hypothetical protein [Ricinus communis]
Length = 363
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 147/286 (51%), Gaps = 52/286 (18%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R + P R+IG +IG+ G ++++R +TK+ I+I + + EERV+ + S
Sbjct: 69 QDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISS------ 122
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD---GGH--QVTAKLLVPSDQIGCVI 155
++ D VS A++AL K+ ++ E+ E S GH T +LL+ Q G +I
Sbjct: 123 --KESDCVVSDAENALKKIATLILKEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSLI 180
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIASRLH 213
G GQ ++ +R+ +GA I +L LP C A SD +VQISG+ VV KA+ +I +L
Sbjct: 181 GVSGQNIEKLRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLR 240
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+NP + IS S + + + V PT P + P T+ D+
Sbjct: 241 ENPPK------QVISISPTYNYATVRPT--------QPYVDP-------TSADY------ 273
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+L ++ +GG+IG+ G+ I++IR ESGA IKV
Sbjct: 274 ----------VTLEMMVSETLVGGLIGRCGSNISRIRNESGAMIKV 309
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF-- 338
+++ R+V P IG VIGK G I +IR+E+ A IK+ + ++ +I +SSKE
Sbjct: 68 AQDVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISSKESDC 127
Query: 339 ----FEDTLSATIEAVVR--LQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
E+ L +++ P S K+ L + T RLL+ S+ G LIG G I
Sbjct: 128 VVSDAENALKKIATLILKEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSLIGVSGQNI 187
Query: 393 TEMRRLTKANIRILPKENLPKIAS--EDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
++R + A I +L LP AS E D +VQISGD+ + A+ ++ +LR N +
Sbjct: 188 EKLRNSSGATITVLAPNQLPLCASAHESDRVVQISGDVPVVLKAVEEIGCQLRENPPKQV 247
Query: 451 GAVS------TFVPVLPYI 463
++S T P PY+
Sbjct: 248 ISISPTYNYATVRPTQPYV 266
>gi|148907101|gb|ABR16694.1| unknown [Picea sitchensis]
Length = 490
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 159/326 (48%), Gaps = 58/326 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P + V+R L P +K+G IIGR GE VK++ +T+S+I+I + + G+ ERVV V
Sbjct: 47 PGENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMV------- 99
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA--EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A E+ D +SPA D + KVH R+I +E+ + + GG +T +LL+ Q G +IGK
Sbjct: 100 SAKEEPDATISPAMDGILKVHKRIIEGIDEVGRTQQAAGGPTIT-RLLLAGIQSGSLIGK 158
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD--- 214
G +++I+ +G +++ E +P CAL D++++I GE + V KAL + S L
Sbjct: 159 QGATIKSIQENSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHLRKFLV 218
Query: 215 ----------NPSRS------QHLLASAISNSHSS----SGSLVGPTAATPIVGIAPLMG 254
N S++ Q+L S++ +S SGS G + P
Sbjct: 219 DRSVLPMYEMNMSKTNQSQMEQNLSHQPWSHNQTSSLPNSGSGFGNNSK-----YTPTAP 273
Query: 255 PYGGYKG------DTAGDWSRSLYSAPRDDLSSK------------EFSLRLVCPVANIG 296
P+ Y +T ++Y RD L + S R+ P++
Sbjct: 274 PHDNYYAPSDLPPETHSHHGLNMYG--RDPLGGHSVPNAAPAPVITQVSQRMQIPLSYAD 331
Query: 297 GVIGKGGAIINQIRQESGAAIKVDSS 322
VIG GA I+ R+ SGA I ++ +
Sbjct: 332 AVIGTNGANISYCRRNSGAIITIEET 357
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 92/172 (53%), Gaps = 5/172 (2%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +GG+IG+ G + ++ +E+ + IK+ + + ++ VS+KE + T
Sbjct: 49 ENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMVSAKEEPDAT 108
Query: 343 LSATIEAVVRLQPRCSEKIE-----RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
+S ++ ++++ R E I+ + + TRLL+ + G LIGK G+ I ++
Sbjct: 109 ISPAMDGILKVHKRIIEGIDEVGRTQQAAGGPTITRLLLAGIQSGSLIGKQGATIKSIQE 168
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ +++ E++P A DD++++I G+ AL V++ LR L DR
Sbjct: 169 NSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVHKALELVVSHLRKFLVDR 220
>gi|225463940|ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 123/221 (55%), Gaps = 20/221 (9%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIG--------PEDTVYRYLCPIR 52
MA ++G+ Q D P ++R G D D I G P ++V+R L P +
Sbjct: 1 MAEVEENFGEPDMDQLP-EDSQPQQKR--GRDDDSAIGGGEKRWPGWPGESVFRMLVPAQ 57
Query: 53 KIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
K+GSIIGR GE +K++ +T+++I+I + PG+ ER V V +A E+ D + PA
Sbjct: 58 KVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV-------SAKEEPDSSLPPA 110
Query: 113 QDALFKVHDRVIAEELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
D L KVH R++ + L GD G +V+ +LLV + Q G +IGK G V++I+ +
Sbjct: 111 MDGLLKVHKRIV-DGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNC 169
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+R+L E LP AL+ D +V++ GE V KA+ IAS L
Sbjct: 170 IVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHL 210
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I +I +E+ A IK+ + + VS+KE + +
Sbjct: 47 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSS 106
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLI----SFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
L ++ ++++ R + +E DS + +TRLLV S+ G LIGK G + ++
Sbjct: 107 LPPAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEA 166
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ +R+L E+LP A +DD +V++ G+ A+ + + LR L DR
Sbjct: 167 SNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDR 217
>gi|296087899|emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 123/221 (55%), Gaps = 20/221 (9%)
Query: 1 MAGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIG--------PEDTVYRYLCPIR 52
MA ++G+ Q D P ++R G D D I G P ++V+R L P +
Sbjct: 70 MAEVEENFGEPDMDQLP-EDSQPQQKR--GRDDDSAIGGGEKRWPGWPGESVFRMLVPAQ 126
Query: 53 KIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
K+GSIIGR GE +K++ +T+++I+I + PG+ ER V V +A E+ D + PA
Sbjct: 127 KVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV-------SAKEEPDSSLPPA 179
Query: 113 QDALFKVHDRVIAEELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
D L KVH R++ + L GD G +V+ +LLV + Q G +IGK G V++I+ +
Sbjct: 180 MDGLLKVHKRIV-DGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNC 238
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+R+L E LP AL+ D +V++ GE V KA+ IAS L
Sbjct: 239 IVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHL 279
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I +I +E+ A IK+ + + VS+KE + +
Sbjct: 116 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSS 175
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLI----SFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
L ++ ++++ R + +E DS + +TRLLV S+ G LIGK G + ++
Sbjct: 176 LPPAMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEA 235
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ +R+L E+LP A +DD +V++ G+ A+ + + LR L DR
Sbjct: 236 SNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDR 286
>gi|449442959|ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 108/175 (61%), Gaps = 10/175 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+GSIIGR GE +K++ +T+++I+I + PG+ ER V V SA DE
Sbjct: 82 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV-SAKDEP 140
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGD--EDSDGGHQVTAKLLVPSDQIGCVIGK 157
D PA D L +VH R++ + L GD + G +V+ +LLV + Q G +IGK
Sbjct: 141 ------DSAFPPAVDGLLRVHKRIV-DGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGK 193
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G V++I+ E+ +R+L E LP AL+ D +V++ G+ + V KA+ IAS L
Sbjct: 194 QGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHL 248
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I +I +E+ A IK+ + + VS+K+ +
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLI-----SFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
++ ++R+ R + +E D+ +TRLLV S+ G LIGK G + ++
Sbjct: 144 FPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQE 203
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
+ +R+L E+LP A +DD +V++ GD A+ + + LR L DR + +
Sbjct: 204 ESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDR-----SII 258
Query: 458 PVL 460
PV
Sbjct: 259 PVF 261
>gi|449531912|ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 108/175 (61%), Gaps = 10/175 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+GSIIGR GE +K++ +T+++I+I + PG+ ER V V SA DE
Sbjct: 82 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV-SAKDEP 140
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGD--EDSDGGHQVTAKLLVPSDQIGCVIGK 157
D PA D L +VH R++ + L GD + G +V+ +LLV + Q G +IGK
Sbjct: 141 ------DSAFPPAVDGLLRVHKRIV-DGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGK 193
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G V++I+ E+ +R+L E LP AL+ D +V++ G+ + V KA+ IAS L
Sbjct: 194 QGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHL 248
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 10/183 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I +I +E+ A IK+ + + VS+K+ +
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLI-----SFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
++ ++R+ R + +E D+ +TRLLV S+ G LIGK G + ++
Sbjct: 144 FPPAVDGLLRVHKRIVDGLEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKSIQE 203
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
+ +R+L E+LP A +DD +V++ GD A+ + + LR L DR + +
Sbjct: 204 ESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKAVELIASHLRKFLVDR-----SII 258
Query: 458 PVL 460
PV
Sbjct: 259 PVF 261
>gi|356530005|ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 385
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 145/289 (50%), Gaps = 59/289 (20%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R + P R+IG +IG+ G ++++R DTK+ I+I + + EERV+ + S
Sbjct: 100 QDVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISS------ 153
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA--------KLLVPSDQIG 152
+D D+ V+ A+ AL ++ ++ E D+ S +VTA +LL+ Q G
Sbjct: 154 --KDNDEKVTDAEKALEQIAHLILKE----DDSSLDASKVTAGHVAANTIRLLIAGSQAG 207
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIAS 210
+IG GQ ++ +R +GA I +L LP C A SD +VQ+SG+ V KAL +I
Sbjct: 208 GLIGMSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGC 267
Query: 211 RLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRS 270
+L +NP R IS S + + + + P+ P + P T+ D+
Sbjct: 268 QLRENPPR------QVISISPTYNYAAIRPS--------QPYLDP-------TSVDY--- 303
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ ++ +GG+IG+ G+ I++IR ESGA IKV
Sbjct: 304 -------------VTFEMLISETMVGGLIGRCGSNISRIRNESGAMIKV 339
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 90/178 (50%), Gaps = 19/178 (10%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
++ R+V P IG VIGK G I +IR+++ A IK+ + ++ +I +SSK+ E
Sbjct: 100 QDVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDNDEK 159
Query: 342 TLSA--TIEAVVRLQPRCSEKIERDSGL----------ISFTTRLLVPTSRIGCLIGKGG 389
A +E + L + E DS L + T RLL+ S+ G LIG G
Sbjct: 160 VTDAEKALEQIAHLILK-----EDDSSLDASKVTAGHVAANTIRLLIAGSQAGGLIGMSG 214
Query: 390 SIITEMRRLTKANIRILPKENLPKIAS--EDDEMVQISGDLDLAKDALIQVMTRLRAN 445
I ++R + A+I +L LP AS E D +VQ+SGD+ AL ++ +LR N
Sbjct: 215 QNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLREN 272
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 113/297 (38%), Gaps = 84/297 (28%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G V +++VPS QIG VIGK G +Q IR +T A I+I + A + ++ IS
Sbjct: 99 GQDVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIAD-----AIARHEERVIIISS 153
Query: 197 -----EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
+ + +KAL QIA HL+ +S +S G AA
Sbjct: 154 KDNDEKVTDAEKALEQIA-----------HLILKEDDSSLDASKVTAGHVAAN------- 195
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
++RL+ + GG+IG G I ++R
Sbjct: 196 ---------------------------------TIRLLIAGSQAGGLIGMSGQNIEKLRD 222
Query: 312 ESGAAIKVDSSST----------------EGDDCLITVSSKEFFEDTLSATIEAVVRLQP 355
SGA+I V + + GD + + +E V+ + P
Sbjct: 223 SSGASITVLAPNQLPLCASAHESDRVVQLSGDVPAVMKALEEIGCQLRENPPRQVISISP 282
Query: 356 -------RCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
R S+ + + T +L+ + +G LIG+ GS I+ +R + A I++
Sbjct: 283 TYNYAAIRPSQPYLDPTSVDYVTFEMLISETMVGGLIGRCGSNISRIRNESGAMIKV 339
>gi|308080276|ref|NP_001183239.1| hypothetical protein [Zea mays]
gi|238010240|gb|ACR36155.1| unknown [Zea mays]
gi|414884425|tpg|DAA60439.1| TPA: hypothetical protein ZEAMMB73_126154 [Zea mays]
Length = 647
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 121/395 (30%), Positives = 186/395 (47%), Gaps = 50/395 (12%)
Query: 78 IGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG 137
+G TVP R V S+S E A SPAQ+AL V D A ++++ G
Sbjct: 82 VGPTVP---VRRVEASSSSAEPLAL-------SPAQEALVAVIDTEGALCCAVEKEARGK 131
Query: 138 HQ---VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH--LPSCALRSDELV 192
+ +T LLV +D++ G+G +++ I E GA +R+ E P +E+V
Sbjct: 132 ARPGCITCLLLVDADRLEASTGRG--VMERIALEAGADVRVAMWEEGAQPPRGQPLEEVV 189
Query: 193 QISGEASVVKKALCQIASRLH-DNPSRSQHLLASAISNSHS---SSGSLVGPTAATPIVG 248
+I+G+ + V+KAL ++S L D P I NS + GS++ P A++ + G
Sbjct: 190 EITGDRTAVRKALVALSSFLQGDLP----------IGNSTTYVKKEGSIL-PWASSEVPG 238
Query: 249 IAPLMGPYGGYKGDTAGDWSRSLYSAPRD---DLSSK---EFSLRLVCPVANIGGVIGKG 302
P MG S + P D SK + S RL+ P GG+IGK
Sbjct: 239 --PNMGASCSEASTEFAQGSVAKTHCPEGNTGDAQSKTLQQVSFRLLLPTYLAGGLIGKK 296
Query: 303 GAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE-------FFEDTLSATIEAVVRLQP 355
G II I E+GA I V + + +IT+ + E + L + ++ ++
Sbjct: 297 GLIIKGIEVETGACIDVGAPVAGCKERVITICALESPDSEYHIVQSALLLIFDRMMEMET 356
Query: 356 RCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIA 415
E+ S F R+LV ++ GCL+G GGSII EM T A I+IL +P A
Sbjct: 357 NTHSTFEKAS---QFLVRVLVLKNQFGCLVGLGGSIIKEMVNTTGARIQILDDTEIPACA 413
Query: 416 SEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
S + +VQI+G+L ++AL V +LR ++F E
Sbjct: 414 STFELVVQITGELMNIRNALSLVFWKLRNHIFSNE 448
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 121/235 (51%), Gaps = 24/235 (10%)
Query: 12 SHSQTDYAD------HGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
S + T++A H P TGD + + + + +R L P G +IG+ G I+
Sbjct: 246 SEASTEFAQGSVAKTHCPEGN--TGDAQSKTL---QQVSFRLLLPTYLAGGLIGKKGLII 300
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
K + ++T + I +G V G +ERV+T+ A E D Q AL + DR++
Sbjct: 301 KGIEVETGACIDVGAPVAGCKERVITIC-------ALESPDSEYHIVQSALLLIFDRMME 353
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E + Q ++LV +Q GC++G GG I++ + + TGA+I+IL D +P+CA
Sbjct: 354 METNTHSTFEKASQFLVRVLVLKNQFGCLVGLGGSIIKEMVNTTGARIQILDDTEIPACA 413
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ------HLLASAISNSHSSS 234
+ +VQI+GE ++ AL + +L ++ ++ H+ +S I+ S+++S
Sbjct: 414 STFELVVQITGELMNIRNALSLVFWKLRNHIFSNETDYNNSHISSSEIAESNATS 468
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 110/191 (57%), Gaps = 19/191 (9%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP 83
N +R+ G P D+V+R L P+ K+G+IIGR GE +K++ ++K++I+I + P
Sbjct: 103 NDKRWPG--------WPGDSVFRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPP 154
Query: 84 GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVT 141
G ER V + SA DE D+ +SPA D L ++H R+ ++ G G
Sbjct: 155 GVPERAVMI-SAKDEP------DEQISPAMDGLLRIHKRIADGSDGEFGQTQRGTGTMGP 207
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
+LLVP+ Q G +IGK G +++I+ + A +RI+ E++P AL D +V+I GE V
Sbjct: 208 TRLLVPASQAGSLIGKQGATIKSIQDSSKAVVRIV--ENVPPVALNDDRVVEIQGEPLSV 265
Query: 202 KKALCQIASRL 212
+KA+ IAS L
Sbjct: 266 QKAVELIASHL 276
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 96/171 (56%), Gaps = 10/171 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ PV +G +IG+ G I ++ +ES A IK+ + + +S+K+ ++ +S
Sbjct: 116 FRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQISP 175
Query: 346 TIEAVVRLQPRCSE-------KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++R+ R ++ + +R +G + TRLLVP S+ G LIGK G+ I ++
Sbjct: 176 AMDGLLRIHKRIADGSDGEFGQTQRGTGTMG-PTRLLVPASQAGSLIGKQGATIKSIQDS 234
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+KA +RI+ EN+P +A DD +V+I G+ + A+ + + LR L D
Sbjct: 235 SKAVVRIV--ENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRKFLVDH 283
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 107/173 (61%), Gaps = 10/173 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P + V+R L P++K+G IIGR GE +K+L +TK++I+I + PG+ ER V V
Sbjct: 37 PGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMV------- 89
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A E+ D ++PA D L +VH ++ ++ D S G V+ +LLV + Q G +IGK G
Sbjct: 90 SAKEEPDAPIAPAIDGLLRVHKCIM--DVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQG 147
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+++I+ + +R+L E+LP AL++D +V+I GE + V KA+ IAS L
Sbjct: 148 ATIKSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNL 199
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 5/170 (2%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ PV +G +IG+ G I ++ +E+ A IK+ + + VS+KE +
Sbjct: 39 ENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAP 98
Query: 343 LSATIEAVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++ I+ ++R+ +C +E D + + +TRLLV ++ G LIGK G+ I ++ +
Sbjct: 99 IAPAIDGLLRVH-KCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEAS 157
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+R+L ENLP A ++D +V+I G+ A+ + + LR L DR
Sbjct: 158 NCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDR 206
>gi|359479585|ref|XP_002275698.2| PREDICTED: uncharacterized protein LOC100266515 [Vitis vinifera]
Length = 858
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 107/173 (61%), Gaps = 10/173 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P + V+R L P++K+G IIGR GE +K+L +TK++I+I + PG+ ER V V
Sbjct: 37 PGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMV------- 89
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A E+ D ++PA D L +VH ++ ++ D S G V+ +LLV + Q G +IGK G
Sbjct: 90 SAKEEPDAPIAPAIDGLLRVHKCIM--DVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQG 147
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+++I+ + +R+L E+LP AL++D +V+I GE + V KA+ IAS L
Sbjct: 148 ATIKSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNL 199
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 5/170 (2%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ PV +G +IG+ G I ++ +E+ A IK+ + + VS+KE +
Sbjct: 39 ENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAP 98
Query: 343 LSATIEAVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++ I+ ++R+ +C +E D + + +TRLLV ++ G LIGK G+ I ++ +
Sbjct: 99 IAPAIDGLLRVH-KCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEAS 157
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+R+L ENLP A ++D +V+I G+ A+ + + LR L DR
Sbjct: 158 NCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDR 206
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 103/168 (61%), Gaps = 11/168 (6%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
L P +K+GSIIGR GE +K++ +T+++I+I + PG+ ER V V +A E+ D
Sbjct: 2 LVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMV-------SAKEEPDS 54
Query: 108 FVSPAQDALFKVHDRVIAEELRGDEDSD---GGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
+ PA D L +VH R+I + L D + G +V+ +LLVP+ Q G +IGK G V++
Sbjct: 55 SLPPAMDGLLRVHKRII-DGLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKS 113
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
I+ + +R+L E LP AL+ D +V++ GEA+ V KA+ IAS L
Sbjct: 114 IQEASTCIVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHL 161
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 88/168 (52%), Gaps = 6/168 (3%)
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATI 347
++ P +G +IG+ G I +I +E+ A IK+ + + VS+KE + +L +
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAM 60
Query: 348 EAVVRLQPRCSEKIERDSGLISFT------TRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
+ ++R+ R + ++ DS T TRLLVP S+ G LIGK G + ++ +
Sbjct: 61 DGLLRVHKRIIDGLDSDSSNTPPTSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQEASTC 120
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+R+L E+LP A +DD +V++ G+ A+ + + LR L DR
Sbjct: 121 IVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVELIASHLRKFLVDR 168
>gi|357463999|ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355491329|gb|AES72532.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 646
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 112/186 (60%), Gaps = 14/186 (7%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC + G +IG+ G I+K +R T + I + E V G EER++ + SD
Sbjct: 63 TSYRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERIIEI---SDTRRRD 119
Query: 103 EDG--DKFVSPAQDALFKVHDRVIAEELRGDEDSD-------GGHQVTAKLLVPSDQIGC 153
DG +F SPAQ+AL +H+R++ + +++ D GG +V+++L+V +G
Sbjct: 120 PDGRMPQF-SPAQEALLLIHERLLENDPGFEDEEDYGGGRGGGGKRVSSRLVVSKMHVGS 178
Query: 154 VIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
++GKGG+I++ +R ET QIRIL +D +LP C S+E+VQ++G+ VK A I+SRL
Sbjct: 179 LLGKGGKIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIVQVTGDIHNVKNAFLVISSRL 238
Query: 213 HDNPSR 218
++ R
Sbjct: 239 RESQHR 244
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 108/192 (56%), Gaps = 6/192 (3%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
++ R++CPV + ++G+ G I+ ++ G +++ D+ ++ ++S+E D
Sbjct: 329 EDLIFRILCPVDRVDRIVGESGGILELLQDRVGVDVQISDRVGGSDEQMVIITSEEGPND 388
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
T+ EA++ +Q + ++ +I TTRL+VP+S I CL GK S+ +E+ R T A
Sbjct: 389 TMFPAQEALLHIQ---THIVDLSDSII--TTRLIVPSSDIECLDGKNASL-SEIERSTGA 442
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
+++ILP+E LP + DE+VQI G+++ A++ ++ V +LR+ ++ T P P
Sbjct: 443 SVQILPREELPPCIANTDELVQIVGEIEAARNVILDVTAKLRSYVYRDILQWDTVPPSAP 502
Query: 462 YIPVSENGSDGL 473
V + S+ +
Sbjct: 503 LPSVEASSSNSM 514
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 141/315 (44%), Gaps = 43/315 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
ED ++R LCP+ ++ I+G G I++ L+ ++I + V GS+E++V + S
Sbjct: 329 EDLIFRILCPVDRVDRIVGESGGILELLQDRVGVDVQISDRVGGSDEQMVIITSE----- 383
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E + + PAQ+AL + ++ + SD +T +L+VPS I C+ GK
Sbjct: 384 --EGPNDTMFPAQEALLHIQTHIV-------DLSDS--IITTRLIVPSSDIECLDGKNAS 432
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD------ 214
+ + RS TGA ++IL E LP C +DELVQI GE + + + ++L
Sbjct: 433 LSEIERS-TGASVQILPREELPPCIANTDELVQIVGEIEAARNVILDVTAKLRSYVYRDI 491
Query: 215 ------NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
PS + ++ SNS ++ V +A GG + +
Sbjct: 492 LQWDTVPPSAPLPSVEASSSNSMATVAETATANQNMQSVAVALASKESGG-----STEMG 546
Query: 269 RSLYSAPRDDLSS---------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ S RDDL + L +V P + ++ K + + QI + SGA +K+
Sbjct: 547 KQKESDRRDDLPTGLNRTVSLVTRSILEVVIPEYAVPKLLAKSKSKLAQISELSGANVKL 606
Query: 320 DSSSTEGDDCLITVS 334
+ + +I +S
Sbjct: 607 VEDRPDEKEKIIQIS 621
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 97/188 (51%), Gaps = 24/188 (12%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED--- 341
S RL+C GGVIGK G+II IRQ +GA I V ++ +I +S +
Sbjct: 64 SYRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERIIEISDTRRRDPDGR 123
Query: 342 --TLSATIEAVVRLQPRCSEKIERDSGL--------------ISFTTRLLVPTSRIGCLI 385
S EA++ + R +E D G ++RL+V +G L+
Sbjct: 124 MPQFSPAQEALLLIHERL---LENDPGFEDEEDYGGGRGGGGKRVSSRLVVSKMHVGSLL 180
Query: 386 GKGGSIITEMRRLTKANIRILPKEN-LPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
GKGG II +MR TK IRILP+++ LP+ S +E+VQ++GD+ K+A + + +RLR
Sbjct: 181 GKGGKIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIVQVTGDIHNVKNAFLVISSRLRE 240
Query: 445 NLF-DREG 451
+ DR G
Sbjct: 241 SQHRDRSG 248
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 107/174 (61%), Gaps = 9/174 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P +TV+R L P +K+GSIIGR G+++K++ +T+++I+I + PG+ ER V V
Sbjct: 175 PGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMV------- 227
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDE-DSDGGHQVTAKLLVPSDQIGCVIGKG 158
+ E+ + + P+ D L +VH R++ + L G+ + +V+ +LLVP+ Q G +IGK
Sbjct: 228 SGKEEPESSLPPSMDGLLRVHMRIV-DGLDGEPSQAPPASKVSTRLLVPASQAGSLIGKQ 286
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G V+ I+ + +R+L E LP AL+ D +V++ GE + V KAL IAS L
Sbjct: 287 GGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHL 340
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 90/171 (52%), Gaps = 4/171 (2%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G +I +I +E+ A IK+ + + VS KE E +
Sbjct: 177 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 236
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLIS----FTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
L +++ ++R+ R + ++ + +TRLLVP S+ G LIGK G + ++
Sbjct: 237 LPPSMDGLLRVHMRIVDGLDGEPSQAPPASKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 296
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ +R+L E+LP A +DD +V++ G+ AL + + LR L DR
Sbjct: 297 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKALELIASHLRKFLVDR 347
>gi|255557235|ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 462
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/328 (30%), Positives = 161/328 (49%), Gaps = 55/328 (16%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
DE + V ++L P + IG VIGK G+++ +IR ET A+++++ P+ D
Sbjct: 30 DERGNNDELVAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGPN-----DR 84
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS--AISNSHSSSGSLVGPTAATPIVG 248
++ I V KK ++ HD+ Q A+ A+ HS+ + V
Sbjct: 85 VITIY--CYVKKKEDVELDDEFHDH----QPFCAAQDALLRVHSAISNAVS--------- 129
Query: 249 IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
S+ + R + KE R++ P + +IGK G I +
Sbjct: 130 ---------------------SVLDSDRK-MKDKE-ECRILVPSSQSANIIGKAGTTIKK 166
Query: 309 IRQESGAAIKV--DSSSTEGDDCLITVSSKEFFEDTL-SATIEAVVRLQPRCSEKIERDS 365
+R ++ A IKV +S C + + D L S +EA++ LQ + +++ D
Sbjct: 167 LRSKTRATIKVTPKDASDPTHSCAMDFDNFIMSPDDLKSMAVEAILLLQGKINDE---DD 223
Query: 366 GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
+S RLLVP IGC+IGK GSII E+RR TKA+IRI K PK A DE+V++
Sbjct: 224 DTVSI--RLLVPCKVIGCIIGKSGSIINEIRRRTKADIRI-SKGQKPKCADSSDELVEVL 280
Query: 426 GDLDLAKDALIQVMTRLRAN-LFDREGA 452
G++ +DAL+Q++ RLR + L +++G+
Sbjct: 281 GEVGSVRDALVQIVLRLRDDALKEKDGS 308
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 101/311 (32%), Positives = 144/311 (46%), Gaps = 48/311 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE-D 104
R L P + +IIG+ G +K+LR T++ I+ VT ASD T++ D
Sbjct: 145 RILVPSSQSANIIGKAGTTIKKLRSKTRATIK------------VTPKDASDPTHSCAMD 192
Query: 105 GDKFV-SPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
D F+ SP V ++ + DED D V+ +LLVP IGC+IGK G I+
Sbjct: 193 FDNFIMSPDDLKSMAVEAILLLQGKINDEDDD---TVSIRLLVPCKVIGCIIGKSGSIIN 249
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ--- 220
IR T A IRI K + P CA SDELV++ GE V+ AL QI RL D+ + +
Sbjct: 250 EIRRRTKADIRISKGQK-PKCADSSDELVEVLGEVGSVRDALVQIVLRLRDDALKEKDGS 308
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPL----------------MGPYGGYKGDTA 264
H + +S + P+ + + + PL GY T
Sbjct: 309 HNPSVGADPLYSGGSGISVPSLLSSVPPVTPLAYDQRPETGSGLGLLSSSNLYGYGSLTM 368
Query: 265 GDWSRSLYSAPRDDLSSKEF-------SLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
GD Y + SSK + +L ++ P +G V+GKGGA I IR+ SGA I
Sbjct: 369 GDNG---YDSMSSYSSSKLYGGLPPPSTLEMLVPANAVGKVLGKGGANIANIRKISGAMI 425
Query: 318 KV-DSSSTEGD 327
++ D+ S GD
Sbjct: 426 EISDAKSARGD 436
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 104/196 (53%), Gaps = 13/196 (6%)
Query: 9 GKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQL 68
GKR+ Q D+ D ++ +D+D+ E YR LCP IGS+IG+ G+++ +
Sbjct: 5 GKRNRLQRDHHDGDNKNQKRRVNDKDERGNNDELVAYRILCPDEVIGSVIGKNGKVINSI 64
Query: 69 RIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF-----VSPAQDALFKVHDRV 123
R +T++K+++ + PG +RV+T+Y + E D+F AQDAL +VH +
Sbjct: 65 RQETRAKVKVVDPFPGPNDRVITIYCYVKKKEDVELDDEFHDHQPFCAAQDALLRVHSAI 124
Query: 124 ---IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDE 179
++ L D D + ++LVPS Q +IGK G ++ +RS+T A I++ KD
Sbjct: 125 SNAVSSVL--DSDRKMKDKEECRILVPSSQSANIIGKAGTTIKKLRSKTRATIKVTPKDA 182
Query: 180 HLP--SCALRSDELVQ 193
P SCA+ D +
Sbjct: 183 SDPTHSCAMDFDNFIM 198
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 32 DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVT 91
D D++ P ++V+R L P +K+G+IIGR GE +K++ +TK++I+I + PG ER V
Sbjct: 110 DDDKWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVM 169
Query: 92 VYSASDETNAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSD 149
+ SA DE +A +SPA D L +VH R+ + G G+ +LLVPS
Sbjct: 170 I-SAKDEPDA------PLSPAVDGLLRVHKRITDSSNGESGQLQRSAGNIGPTRLLVPSS 222
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA 209
Q G +IGK G +++I+ + + +RI+ E++P AL D +V+I GE V+KA+ IA
Sbjct: 223 QAGSLIGKQGATIKSIQDSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELIA 280
Query: 210 SRL 212
S L
Sbjct: 281 SHL 283
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 98/174 (56%), Gaps = 10/174 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +E+ A IK+ + + +S+K+ +
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 179
Query: 343 LSATIEAVVRLQPRCSE-------KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
LS ++ ++R+ R ++ +++R +G I TRLLVP+S+ G LIGK G+ I +
Sbjct: 180 LSPAVDGLLRVHKRITDSSNGESGQLQRSAGNIG-PTRLLVPSSQAGSLIGKQGATIKSI 238
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ +K+ +RI+ EN+P +A DD +V+I G+ + A+ + + LR L DR
Sbjct: 239 QDSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELIASHLRKFLVDR 290
>gi|147807331|emb|CAN73002.1| hypothetical protein VITISV_044056 [Vitis vinifera]
Length = 1121
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 107/173 (61%), Gaps = 10/173 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P + V+R L P++K+G IIGR GE +K+L +TK++I+I + PG+ ER V V
Sbjct: 37 PGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMV------- 89
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A E+ D ++PA D L +VH ++ ++ D S G V+ +LLV + Q G +IGK G
Sbjct: 90 SAKEEPDAPIAPAIDGLLRVHKCIM--DVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQG 147
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+++I+ + +R+L E+LP AL++D +V+I GE + V KA+ IAS L
Sbjct: 148 ATIKSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNL 199
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 92/170 (54%), Gaps = 5/170 (2%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ PV +G +IG+ G I ++ +E+ A IK+ + + VS+KE +
Sbjct: 39 ENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDAP 98
Query: 343 LSATIEAVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++ I+ ++R+ +C +E D + + +TRLLV ++ G LIGK G+ I ++ +
Sbjct: 99 IAPAIDGLLRVH-KCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEAS 157
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+R+L ENLP A ++D +V+I G+ A+ + + LR L DR
Sbjct: 158 NCIVRVL-GENLPLFALQNDTVVEIQGEPASVHKAVELIASNLRKFLVDR 206
>gi|147794489|emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
Length = 534
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 104/175 (59%), Gaps = 9/175 (5%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
G E +R L P +K+GSIIGR GE +K++ +T+++I+I + PG+ ER V V
Sbjct: 124 GLERVFFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV------ 177
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGK 157
+A E+ D + PA D L KVH R++ + L GD G +V+ +LLV + Q G +IGK
Sbjct: 178 -SAKEEPDSSLPPAMDGLLKVHKRIV-DGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGK 235
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G V++I+ + +R+L E LP AL+ D +V++ GE V KA+ IAS L
Sbjct: 236 QGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHL 290
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 89/168 (52%), Gaps = 4/168 (2%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ P +G +IG+ G I +I +E+ A IK+ + + VS+KE + +L
Sbjct: 130 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPP 189
Query: 346 TIEAVVRLQPRCSEKIERDSGLI----SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
++ ++++ R + +E DS + +TRLLV S+ G LIGK G + ++ +
Sbjct: 190 AMDGLLKVHKRIVDGLEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEASNC 249
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+R+L E+LP A +DD +V++ G+ A+ + + LR L DR
Sbjct: 250 IVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVELIASHLRKFLVDR 297
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 30/42 (71%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
DG +V ++LVP+ ++G +IG+ G+ ++ I ET A+I+IL
Sbjct: 123 DGLERVFFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKIL 164
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 113/191 (59%), Gaps = 9/191 (4%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P + G + ++ P +TV+R L P +K+GSIIGR G+++K++ +T+++I+I +
Sbjct: 167 PEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGP 226
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVT 141
PG+ ER V V + E+ + + P+ D L +VH R++ + L G+ + +V+
Sbjct: 227 PGTTERAVMV-------SGKEEPESSLPPSMDGLLRVHMRIV-DGLDGEASQAPPPSKVS 278
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
+LLVP+ Q G +IGK G V+ I+ + +R+L E LP AL+ D +V++ GE + V
Sbjct: 279 TRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSV 338
Query: 202 KKALCQIASRL 212
+AL IAS L
Sbjct: 339 HRALELIASHL 349
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G +I +I +E+ A IK+ + + VS KE E +
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLIS----FTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
L +++ ++R+ R + ++ ++ +TRLLVP S+ G LIGK G + ++
Sbjct: 246 LPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 305
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ +R+L E+LP A +DD +V++ G+ AL + + LR L DR
Sbjct: 306 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDR 356
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 113/191 (59%), Gaps = 9/191 (4%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P + G + ++ P +TV+R L P +K+GSIIGR G+++K++ +T+++I+I +
Sbjct: 167 PEEDATVGGEEKRWPGWPGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGP 226
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVT 141
PG+ ER V V + E+ + + P+ D L +VH R++ + L G+ + +V+
Sbjct: 227 PGTTERAVMV-------SGKEEPESSLPPSMDGLLRVHMRIV-DGLDGEASQAPPPSKVS 278
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
+LLVP+ Q G +IGK G V+ I+ + +R+L E LP AL+ D +V++ GE + V
Sbjct: 279 TRLLVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSV 338
Query: 202 KKALCQIASRL 212
+AL IAS L
Sbjct: 339 HRALELIASHL 349
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 4/171 (2%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G +I +I +E+ A IK+ + + VS KE E +
Sbjct: 186 ETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPESS 245
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLIS----FTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
L +++ ++R+ R + ++ ++ +TRLLVP S+ G LIGK G + ++
Sbjct: 246 LPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQEA 305
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ +R+L E+LP A +DD +V++ G+ AL + + LR L DR
Sbjct: 306 SACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRALELIASHLRKFLVDR 356
>gi|356573119|ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Glycine max]
Length = 446
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 105/176 (59%), Gaps = 11/176 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G IIGR GE +K++ +T+++++I + PG+ +R V +
Sbjct: 44 PGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMI------- 96
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGD---EDSDGGHQVTAKLLVPSDQIGCVIG 156
+A E+ V PA D L +VH R+I + L D S +V+ KLLVP+ Q G +IG
Sbjct: 97 SAKEEPGSSVPPAVDGLLRVHKRII-DGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIG 155
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G V++I+ + +R+L E LP AL+ D +V++ G+ + V KAL IAS L
Sbjct: 156 KQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHL 211
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 106/217 (48%), Gaps = 22/217 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +GG+IG+ G I +I +E+ A +K+ + +S+KE +
Sbjct: 46 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSS 105
Query: 343 LSATIEAVVRLQPRCSEKIERD-----SGLI-SFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ ++ ++R+ R + +E D SG+ +T+LLVP S+ G LIGK G + ++
Sbjct: 106 VPPAVDGLLRVHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 165
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+ +R+L E+LP A +DD +V++ GD AL + + LR L DR
Sbjct: 166 EASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTGVHKALELIASHLRKFLVDRG------ 219
Query: 457 VPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYG 493
IP+ E +N ++ ++ PP+ +G
Sbjct: 220 -----VIPIFE-----MNMQTANTHHAEHMPPHQSWG 246
>gi|356505941|ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/176 (36%), Positives = 105/176 (59%), Gaps = 11/176 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G IIGR GE +K++ +T+++++I + PG+ +R V +
Sbjct: 41 PGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMI------- 93
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGD---EDSDGGHQVTAKLLVPSDQIGCVIG 156
+A E+ V PA D L ++H R+I + L D S +V+ KLLVP+ Q G +IG
Sbjct: 94 SAKEEPGSSVPPAVDGLLRIHKRII-DGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIG 152
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G V++I+ + +R+L E LP AL+ D +V++ G+ + V KAL IAS L
Sbjct: 153 KQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHL 208
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 106/220 (48%), Gaps = 22/220 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +GG+IG+ G I +I +E+ A +K+ + +S+KE +
Sbjct: 43 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSS 102
Query: 343 LSATIEAVVRLQPRCSEKIERD-----SGLI-SFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ ++ ++R+ R + +E D SG+ +T+LLVP S+ G LIGK G + ++
Sbjct: 103 VPPAVDGLLRIHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 162
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+ +R+L E+LP A +DD +V++ GD AL + + LR L DR
Sbjct: 163 EASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAGVHKALELIASHLRKFLVDRG------ 216
Query: 457 VPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYGSSD 496
IP+ E +N ++ + PP+ +G S
Sbjct: 217 -----VIPIFE-----MNMQTANPHHAEHMPPHQSWGPSQ 246
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 106/175 (60%), Gaps = 11/175 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G+IIGR GE +K++ ++K++I+I + PG ER V + SA DE
Sbjct: 105 PGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMI-SAKDEP 163
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
D +SPA D LF+V+ R+ ++ G + + + +LLVP+ Q G +IGK
Sbjct: 164 ------DAPISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGK 217
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++I+ + + +RI+ E LP AL D +V+I GE V+KAL IAS L
Sbjct: 218 QGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 8/173 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +ES A IK+ + + +S+K+ +
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFT------TRLLVPTSRIGCLIGKGGSIITEMR 396
+S ++ + R+ R ++ + DSG TRLLVP S+ G LIGK G+ I ++
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+K+ +RI+ E LP +A DD +V+I G+ + AL + + LR L DR
Sbjct: 227 DSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDR 277
>gi|297601352|ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza sativa Japonica Group]
Length = 512
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 106/175 (60%), Gaps = 11/175 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G+IIGR GE +K++ ++K++I+I + PG ER V + SA DE
Sbjct: 107 PGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMI-SAKDEP 165
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
D +SPA D LF+V+ R+ ++ G + + + +LLVP+ Q G +IGK
Sbjct: 166 ------DAPISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGK 219
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++I+ + + +RI+ E LP AL D +V+I GE V+KAL IAS L
Sbjct: 220 QGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 272
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 8/173 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +ES A IK+ + + +S+K+ +
Sbjct: 109 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 168
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFT------TRLLVPTSRIGCLIGKGGSIITEMR 396
+S ++ + R+ R ++ + DSG TRLLVP S+ G LIGK G+ I ++
Sbjct: 169 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 228
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+K+ +RI+ E LP +A DD +V+I G+ + AL + + LR L DR
Sbjct: 229 DSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDR 279
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 106/175 (60%), Gaps = 11/175 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G+IIGR GE +K++ ++K++I+I + PG ER V + SA DE
Sbjct: 105 PGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMI-SAKDEP 163
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
D +SPA D LF+V+ R+ ++ G + + + +LLVP+ Q G +IGK
Sbjct: 164 ------DAPISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGK 217
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++I+ + + +RI+ E LP AL D +V+I GE V+KAL IAS L
Sbjct: 218 QGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 8/173 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +ES A IK+ + + +S+K+ +
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFT------TRLLVPTSRIGCLIGKGGSIITEMR 396
+S ++ + R+ R ++ + DSG TRLLVP S+ G LIGK G+ I ++
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+K+ +RI+ E LP +A DD +V+I G+ + AL + + LR L DR
Sbjct: 227 DSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDR 277
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 105/175 (60%), Gaps = 11/175 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P++K+G++IGR GE +K++ +++++I+I + PG ER V + SA DE
Sbjct: 123 PGESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMI-SAKDEP 181
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGGHQV-TAKLLVPSDQIGCVIGK 157
+A VSPA D L +VH R+ + D+ G V +LLVP+ Q G +IGK
Sbjct: 182 DA------LVSPAVDGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGSLIGK 235
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++I+ + +RIL E++P AL D +V+I GE V KA+ IAS L
Sbjct: 236 QGATIKSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPLDVHKAVELIASHL 288
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 99/175 (56%), Gaps = 12/175 (6%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ PV +G VIG+ G I ++ +ES A IK+ + + +S+K+ +
Sbjct: 125 ESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMISAKDEPDAL 184
Query: 343 LSATIEAVVRLQPRCSEKI-------ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
+S ++ ++R+ R ++ + +R +G + TRLLVP S+ G LIGK G+ I +
Sbjct: 185 VSPAVDGLLRVHKRITDGLDSETDQPQRGAGPVG-PTRLLVPASQAGSLIGKQGATIKSI 243
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGD-LDLAKDALIQVMTRLRANLFDR 449
+ +K +RIL EN+P +A DD +V+I G+ LD+ K A+ + + LR L DR
Sbjct: 244 QDASKCALRIL--ENVPPVALNDDRVVEIQGEPLDVHK-AVELIASHLRKFLVDR 295
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 106/182 (58%), Gaps = 25/182 (13%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G+IIGR GE +K++ +TK++I+I + PG ER V + SA DE
Sbjct: 118 PGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMI-SAKDEP 176
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG---------GHQVTAKLLVPSDQ 150
D +SPA D L +VH R+ + SDG G+ +LLVPS Q
Sbjct: 177 ------DAPLSPAMDGLLRVHKRIT-------DSSDGESSQPQRSAGNIGPTRLLVPSSQ 223
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G +IGK G +++I+ + + +RI+ E++P AL D +V+I GE V+KA+ I+S
Sbjct: 224 AGSLIGKQGATIKSIQDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELISS 281
Query: 211 RL 212
L
Sbjct: 282 HL 283
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 96/174 (55%), Gaps = 10/174 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +E+ A IK+ + + +S+K+ +
Sbjct: 120 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 179
Query: 343 LSATIEAVVRLQPRC-------SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
LS ++ ++R+ R S + +R +G I TRLLVP+S+ G LIGK G+ I +
Sbjct: 180 LSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIG-PTRLLVPSSQAGSLIGKQGATIKSI 238
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ +K+ +RI+ EN+P +A DD +V+I G+ + A+ + + LR L DR
Sbjct: 239 QDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQKAVELISSHLRKFLVDR 290
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 109/183 (59%), Gaps = 11/183 (6%)
Query: 32 DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVT 91
D +++ P ++V+R L P +K+G+IIGR GE +K++ +TK++I+I + PG ER V
Sbjct: 220 DDNKWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVM 279
Query: 92 VYSASDETNAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSD 149
+ SA DE +A +SPA D L +VH R+ ++ G+ +LLVPS
Sbjct: 280 I-SAKDEPDA------PLSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSS 332
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA 209
Q G +IGK G +++I+ + + +RI+ E++P AL D +V+I GE V++A+ I+
Sbjct: 333 QAGSLIGKQGATIKSIQDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQEAVELIS 390
Query: 210 SRL 212
S L
Sbjct: 391 SHL 393
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 97/174 (55%), Gaps = 10/174 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +E+ A IK+ + + +S+K+ +
Sbjct: 230 ESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDAP 289
Query: 343 LSATIEAVVRLQPRC-------SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
LS ++ ++R+ R S + +R +G I TRLLVP+S+ G LIGK G+ I +
Sbjct: 290 LSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIG-PTRLLVPSSQAGSLIGKQGATIKSI 348
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ +K+ +RI+ EN+P +A DD +V+I G+ ++A+ + + LR L DR
Sbjct: 349 QDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQEAVELISSHLRKFLVDR 400
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/175 (38%), Positives = 107/175 (61%), Gaps = 11/175 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L P +K+G+IIGR GE +K++ ++K++I+I + PG ER V + SA DE
Sbjct: 105 PGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMI-SAKDEP 163
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A +SPA D LF+V+ R+ ++ G + + + +LLVP+ Q G +IGK
Sbjct: 164 DA------PISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGK 217
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++I+ + + +RI+ E LP AL D +V+I GE V+KAL IAS L
Sbjct: 218 QGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHL 270
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 8/173 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G +IG+ G I ++ +ES A IK+ + + +S+K+ +
Sbjct: 107 ESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDAP 166
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFT------TRLLVPTSRIGCLIGKGGSIITEMR 396
+S ++ + R+ R ++ + DSG TRLLVP S+ G LIGK G+ I ++
Sbjct: 167 ISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSIQ 226
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+K+ +RI+ E LP +A DD +V+I G+ + AL + + LR L DR
Sbjct: 227 DSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKALESIASHLRKFLVDR 277
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 151/305 (49%), Gaps = 52/305 (17%)
Query: 53 KIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
KIG +IG+ G +K+LR +T + I+I + + +E+R V + S ++ G S A
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNE-------GVSDRSCA 564
Query: 113 QDALFKVHDRVIAEELRGDEDSDGG---------HQVT---AKLLVPSDQIGCVIGKGGQ 160
+ AL +V ++ +D DG HQ + +LL+ Q G +IGK G
Sbjct: 565 ELALLEVVTILL-------KDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGA 617
Query: 161 IVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIASRLHDNP-- 216
++NIR + A +R+L + LP C A +D LVQISGE + V+ A+ +A+ L DNP
Sbjct: 618 NIKNIRGSSSASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPK 677
Query: 217 --------SRSQHLL------ASAISNSHSSSGSLVGPT-AATPIVGIA--PLMGPYGGY 259
+++ + L + HSS ++ G + ++ + G+ PL GP Y
Sbjct: 678 ETVPTNPEAKTAYFLGIDGNTGQQVLLPHSSVAAVYGHSPSSMALYGLQPHPLAGP--AY 735
Query: 260 KGDTAGDWSRSLYSAPRDDLSS--KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
G + LY+ P L + S + P + +GG+IGKGG I+ +R SGA I
Sbjct: 736 AGGVLAQ-APPLYANPAARLPPMLPKVSAEMSVPSSVMGGLIGKGGFHISHMRSVSGATI 794
Query: 318 KVDSS 322
KV+ S
Sbjct: 795 KVNGS 799
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 31/173 (17%)
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE---------------- 337
IG VIGK G+ I ++R E+GA IK+ +D + +SSK
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGVSDRSCAELALLEV 571
Query: 338 ---FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
+D AT A + Q + S + TRLL+ S+ G LIGK G+ I
Sbjct: 572 VTILLKDGDGATPSAAIGPQHQGSPNL----------TRLLIAGSQAGSLIGKAGANIKN 621
Query: 395 MRRLTKANIRILPKENLP--KIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
+R + A++R+LP + LP A E D +VQISG++ + A+ V LR N
Sbjct: 622 IRGSSSASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDN 674
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 93/305 (30%), Positives = 151/305 (49%), Gaps = 52/305 (17%)
Query: 53 KIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
KIG +IG+ G +K+LR +T + I+I + + +E+R V + S ++ G + A
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNE-------GGSDRTCA 565
Query: 113 QDALFKVHDRVIAEELRGDEDSDGG---------HQVT---AKLLVPSDQIGCVIGKGGQ 160
+ AL +V ++ +D DG HQ + +LL+ Q G +IGK G
Sbjct: 566 ELALLEVVTILL-------KDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGA 618
Query: 161 IVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIASRLHDNP-- 216
++NIR + A +R+L + LP C A +D LVQISGE + V+ A+ +A+ L DNP
Sbjct: 619 NIKNIRGSSSASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDNPPK 678
Query: 217 --------SRSQHLL------ASAISNSHSSSGSLVGPT-AATPIVGIA--PLMGPYGGY 259
+++ + L + HSS ++ G + ++ + G+ PL GP Y
Sbjct: 679 ETVPTTPEAKTAYFLGIDGKTGQQVLLPHSSVAAVYGHSPSSMALYGLQPHPLAGP--AY 736
Query: 260 KGDTAGDWSRSLYSAPRDDLSS--KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
G + LY+ P L + S + P + +GG+IGKGG I+ +R SGA I
Sbjct: 737 AGGVLAQ-APPLYANPAARLPPMLPKVSAEMSVPSSVMGGLIGKGGFHISHMRSVSGATI 795
Query: 318 KVDSS 322
KV+ S
Sbjct: 796 KVNGS 800
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 82/173 (47%), Gaps = 31/173 (17%)
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE---------------- 337
IG VIGK G+ I ++R E+GA IK+ +D + +SSK
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSDRTCAELALLEV 572
Query: 338 ---FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
+D AT A + Q + S + TRLL+ S+ G LIGK G+ I
Sbjct: 573 VTILLKDGDGATPSAAIGPQHQGSPNL----------TRLLIAGSQAGSLIGKAGANIKN 622
Query: 395 MRRLTKANIRILPKENLP--KIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
+R + A++R+LP + LP A E D +VQISG++ + A+ V LR N
Sbjct: 623 IRGSSSASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANLRDN 675
>gi|255574127|ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 416
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 103/178 (57%), Gaps = 13/178 (7%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D VYR + P+ K+GSIIGR GE++K++ ++T+++IRI + P +R+V +
Sbjct: 24 PGDNVYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLI------- 76
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA-----KLLVPSDQIGCV 154
+ E+ + +SPA DA+ +V RV G+ D+ G A KLLV S Q +
Sbjct: 77 SGKEEPEAALSPAMDAVLRVFKRVSGLS-AGEADAMGSAVAGAAFSSVKLLVASSQAINL 135
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
IGK G +++I+ T A +R+L +E PS A + +V+I GEAS V KAL + +L
Sbjct: 136 IGKQGSTIKSIQESTAATVRVLAEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQL 193
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 13/182 (7%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSAT 346
RL+ PVA +G +IG+ G +I ++ E+ A I++ D ++ +S KE E LS
Sbjct: 30 RLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGKEEPEAALSPA 89
Query: 347 IEAVVRLQPRCS--EKIERDS------GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++AV+R+ R S E D+ G + +LLV +S+ LIGK GS I ++
Sbjct: 90 MDAVLRVFKRVSGLSAGEADAMGSAVAGAAFSSVKLLVASSQAINLIGKQGSTIKSIQES 149
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
T A +R+L +E P A+ D+ +V+I G+ AL V+ +LR L D T VP
Sbjct: 150 TAATVRVLAEEEAPSYATSDERIVEIHGEASKVLKALEGVIGQLRKFLVDH-----TVVP 204
Query: 459 VL 460
+
Sbjct: 205 IF 206
>gi|147789222|emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
Length = 587
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 107/183 (58%), Gaps = 7/183 (3%)
Query: 18 YADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
YA +G +KR G +R LC +IG +IG+ G IVKQL+ DT ++IR
Sbjct: 28 YAPNGSSKRSKPPPPPIPVPAG--HVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIR 85
Query: 78 IGETVPGSEERVVTVYSAS--DETNAFEDGDKFV--SPAQDALFKVHDRVIAEELRGDED 133
+ ++ S+ RV+ V + + + A + + V S AQ+A+ +V +R++ D
Sbjct: 86 VEDSPSTSDHRVILVIAPASVNRRIALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGV 145
Query: 134 SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
GG V+ +LL + Q+G VIGKGG++V+ IR E+G++I++L E LP+CA +DE+V+
Sbjct: 146 PPGG-VVSCRLLAETSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVE 204
Query: 194 ISG 196
SG
Sbjct: 205 HSG 207
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/162 (36%), Positives = 90/162 (55%), Gaps = 20/162 (12%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV----------- 333
+ RL+C + IGGVIGK G I+ Q++ ++GA I+V+ S + D +I V
Sbjct: 52 AFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRIA 111
Query: 334 ---SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGK 387
SS+E SA EAV+R+ R E G+ + RLL TS++G +IGK
Sbjct: 112 LQGSSEEV---EASAAQEAVLRVFERILEVAAVVDGVPPGGVVSCRLLAETSQVGSVIGK 168
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
GG ++ ++RR + + I++L E LP A+ DEMV+ SG L+
Sbjct: 169 GGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEHSGSLE 210
>gi|3548819|gb|AAC34491.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 155
Score = 106 bits (265), Expect = 2e-20, Method: Composition-based stats.
Identities = 58/127 (45%), Positives = 85/127 (66%), Gaps = 9/127 (7%)
Query: 76 IRIGETVPGSEERVVTVYSASDETNAFEDGDK-FVSPAQDALFKVHD-------RVIAEE 127
+R+ E +PG +ERVVT+YS S+E N ED ++ FV PA DALFKVHD +
Sbjct: 1 MRVNEALPGCDERVVTIYSNSEERNRIEDDNEDFVCPAFDALFKVHDMVVVEEFDDDDDY 60
Query: 128 LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
DE S+G VT ++LVPSDQIG +IGKGG I+Q +R++T AQIR+ ++++LP C +
Sbjct: 61 NDNDEYSEGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCTEK 119
Query: 188 SDELVQI 194
+ ++ +
Sbjct: 120 ARTILMV 126
Score = 46.2 bits (108), Expect = 0.040, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 366 GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
G T R+LVP+ +IG LIGKGG II +R T A IR+ +NLP + ++ +
Sbjct: 69 GQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RNDNLPMCTEKARTILMVQ 127
Query: 426 GDL 428
+L
Sbjct: 128 RNL 130
Score = 40.4 bits (93), Expect = 2.4, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTV 92
R L P +IG +IG+GG I++ LR DT ++IR+ + +P E+ T+
Sbjct: 76 RMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRVRNDNLPMCTEKARTI 123
>gi|412992928|emb|CCO16461.1| predicted protein [Bathycoccus prasinos]
Length = 703
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 14/186 (7%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAF 102
+YR LCP + GS+IG+ GE VKQL+ D+ +KI++ V + ERV+ + A D
Sbjct: 266 LYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAERVIAI-EAQDV---- 320
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELR----GDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
D +P+Q AL ++ + ++ + R G + + GH + +LL+PS QI VIG+
Sbjct: 321 -DDPTVWAPSQIALLRIVETIVLDAERNTTIGAAEENNGH-IVIRLLLPSSQIRNVIGRF 378
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA-SVVKKALCQIASRLH-DNP 216
G +++ IR +G+ +R+L P CA R+DE++QIS E+ V AL I ++L D P
Sbjct: 379 GNVIERIRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVASALAMITTQLRLDPP 438
Query: 217 SRSQHL 222
R+ L
Sbjct: 439 VRAHEL 444
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 104/185 (56%), Gaps = 16/185 (8%)
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV----DSSSTEGD 327
Y P + +++ RL+CP A G VIGK G + Q++++SGA IKV DS+ E
Sbjct: 253 YRMPENHGATRTLLYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAER- 311
Query: 328 DCLITVSSKEFFEDTLSATIE-AVVRLQPRCSEKIERDSGLIS-------FTTRLLVPTS 379
+I + +++ + T+ A + A++R+ ER++ + + RLL+P+S
Sbjct: 312 --VIAIEAQDVDDPTVWAPSQIALLRIVETIVLDAERNTTIGAAEENNGHIVIRLLLPSS 369
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD-LDLAKDALIQV 438
+I +IG+ G++I +R + +++R+LP P+ A +DE++QIS + ++ AL +
Sbjct: 370 QIRNVIGRFGNVIERIRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVASALAMI 429
Query: 439 MTRLR 443
T+LR
Sbjct: 430 TTQLR 434
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 115/211 (54%), Gaps = 20/211 (9%)
Query: 4 QRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGE 63
+ N+Y + Q G +KR + G P D+V+R L P +K+G+IIGR GE
Sbjct: 84 EENAYNGQVKQQESLQVEGEDKR-WPG--------WPGDSVFRILVPAQKVGAIIGRKGE 134
Query: 64 IVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV 123
+K++ +K++I+I + PG ER V + SA DE D+ +SPA D L ++H R+
Sbjct: 135 FIKKMCEQSKARIKILDGPPGVTERAVII-SAKDEP------DEPISPAMDGLLRIHKRI 187
Query: 124 I--AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
++ G + +LLVP+ Q G +IGK G +++I+ + + +RI+ E++
Sbjct: 188 TDGSDGEFGQPQRGASNVGPTRLLVPASQAGSLIGKQGATIKSIQDSSKSVVRIV--ENV 245
Query: 182 PSCALRSDELVQISGEASVVKKALCQIASRL 212
P AL D +V+I GE V KA+ IA+ L
Sbjct: 246 PPVALNDDRVVEIQGEPLGVHKAVELIANHL 276
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 90/170 (52%), Gaps = 8/170 (4%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ P +G +IG+ G I ++ ++S A IK+ + + +S+K+ ++ +S
Sbjct: 116 FRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVIISAKDEPDEPISP 175
Query: 346 TIEAVVRLQPRCSEKIERDSGLISF------TTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++ ++R+ R ++ + + G TRLLVP S+ G LIGK G+ I ++ +
Sbjct: 176 AMDGLLRIHKRITDGSDGEFGQPQRGASNVGPTRLLVPASQAGSLIGKQGATIKSIQDSS 235
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
K+ +RI+ EN+P +A DD +V+I G+ A+ + LR L D
Sbjct: 236 KSVVRIV--ENVPPVALNDDRVVEIQGEPLGVHKAVELIANHLRKFLVDH 283
>gi|147855522|emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
Length = 321
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 35/229 (15%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
DH KRR +D ++R + P R+IG +IG+ G ++++R +TK+ I+I
Sbjct: 47 DHRSPKRRAKN----------QDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIA 96
Query: 80 ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG--- 136
+ + EERV+ + S +D + +S A++AL + ++ E+ D ++D
Sbjct: 97 DAIARHEERVIIISS--------KDSENVISDAENALLQXASLILKED---DSNTDALKV 145
Query: 137 --GHQV--TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR--SDE 190
GH V +LL+ Q GC+IG GQ ++ +R+ +GA I IL LP CA SD
Sbjct: 146 GVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDR 205
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVG 239
+VQISG+ V KAL +I +L R+ +L A ++ + +LVG
Sbjct: 206 MVQISGDVPAVLKALEEIGCQL-----RTTNLAADYVTLNMMIPETLVG 249
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 109/215 (50%), Gaps = 15/215 (6%)
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
G G+ A D + +P+ +++ R+V P IG VIGK G+ I +IR+E+
Sbjct: 35 GVIASATGEVADD-----HRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREET 89
Query: 314 GAAIKVDSSSTEGDDCLITVSSKEF------FEDTLSATIEAVVRLQPRCSEKIERDSG- 366
A IK+ + ++ +I +SSK+ E+ L +++ ++ ++ G
Sbjct: 90 KATIKIADAIARHEERVIIISSKDSENVISDAENALLQXASLILKEDDSNTDALKVGVGH 149
Query: 367 LISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIAS--EDDEMVQI 424
+++ RLL+ S+ GCLIG G I ++R + A I ILP+ LP AS + D MVQI
Sbjct: 150 VVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQI 209
Query: 425 SGDLDLAKDALIQVMTRLR-ANLFDREGAVSTFVP 458
SGD+ AL ++ +LR NL ++ +P
Sbjct: 210 SGDVPAVLKALEEIGCQLRTTNLAADYVTLNMMIP 244
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 109/234 (46%), Gaps = 43/234 (18%)
Query: 124 IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
+A++ R + V +++VPS QIG VIGK G +Q IR ET A I+I +
Sbjct: 44 VADDHRSPKRRAKNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIAD-----A 98
Query: 184 CALRSDELVQISGEASV-----VKKALCQIASR-LHDNPSRSQ-------HLLASAIS-- 228
A + ++ IS + S + AL Q AS L ++ S + H++A+AI
Sbjct: 99 IARHEERVIIISSKDSENVISDAENALLQXASLILKEDDSNTDALKVGVGHVVANAIRLL 158
Query: 229 NSHSSSGSLVGPT---------AATPIVGIAPL-MGPYGGYKGDT------AGDWSRSLY 272
+ S +G L+G + ++ + I P P D+ +GD L
Sbjct: 159 IAGSQAGCLIGMSGQNIEKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLK 218
Query: 273 SAPR-------DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ +L++ +L ++ P +GG+IG+ G+ I++IR ESGA IKV
Sbjct: 219 ALEEIGCQLRTTNLAADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKV 272
>gi|302816563|ref|XP_002989960.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
gi|300142271|gb|EFJ08973.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
Length = 393
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 159/353 (45%), Gaps = 81/353 (22%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P +R++ G P D V+R + P+ K+G+IIGR GE VK++ +T+S+I+I + V
Sbjct: 37 PGERKWPG--------WPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGV 88
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
PG+ ER+V V +A ED + +SPA D L +VH RV E S G +
Sbjct: 89 PGTLERIVLV-------SAKEDPEATISPAMDGLLRVHRRV-------TEGSSGDGEPVE 134
Query: 143 KLLVPSDQIGCVIGKGGQIVQN--IRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
+++PS +VQ+ + + T A I + E LP CAL D +V++ GE
Sbjct: 135 HIILPSG-----------LVQSRLLVTATQAGSLIGRQEELPLCALADDRMVEVQGEILK 183
Query: 201 VKKALCQIASRLHD-----------------NPSRS----------QHLLASAISNSHSS 233
V+KA+ + S L SRS Q ++S + ++
Sbjct: 184 VQKAMELVVSHLRKFLVDRSVLQLFEFNVSFAGSRSIGYKVHNGELQRAMSSQVQGQQAA 243
Query: 234 SGSLVGPTAATPIVGIAPLMGPYGG--YKGDTAGD--WSRSLYSAP--RDDLSS------ 281
+ + + ATP V PY Y D A ++ S+Y R D++S
Sbjct: 244 A---IATSWATPTVAAT---TPYSSTDYYADQAQSQHYAVSMYGGDPGRVDVTSTTPAPP 297
Query: 282 -KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+ S +L P+ +IG GA IN +R+ SGA I + + + I V
Sbjct: 298 AESVSQQLQVPLLYADAIIGTAGANINYMRRTSGATISIQETPNAPGEMTIEV 350
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 32/174 (18%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ P+ +G +IG+ G + ++ +E+ + IK+ + ++ VS+KE E T+S
Sbjct: 51 FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAKEDPEATISP 110
Query: 346 TIEAVVRLQPRCSE----------KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
++ ++R+ R +E I SGL+ +RLLV ++ G LIG+
Sbjct: 111 AMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQ--SRLLVTATQAGSLIGR-------- 160
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+E LP A DD MV++ G++ + A+ V++ LR L DR
Sbjct: 161 ------------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLRKFLVDR 202
>gi|302770987|ref|XP_002968912.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
gi|300163417|gb|EFJ30028.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
Length = 393
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 155/353 (43%), Gaps = 81/353 (22%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P +R++ G P D V+R + P+ K+G+IIGR GE VK++ +T+S+I+I + V
Sbjct: 37 PGERKWPG--------WPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGV 88
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
PG+ ER+V V +A ED + +SPA D L +VH RV E S G +
Sbjct: 89 PGTLERIVLV-------SAKEDPEATISPAMDGLLRVHRRV-------TEGSSGDGEPVE 134
Query: 143 KLLVPSDQIGCVIGKGGQIVQN--IRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
+++PS +VQ+ + + T A I + E LP CAL D +V++ GE
Sbjct: 135 HIILPSG-----------LVQSRLLVTATQAGSLIGRQEELPLCALADDRMVEVQGEILK 183
Query: 201 VKKALCQIASRLHD-----------------NPSRS----------QHLLASAISNSHSS 233
V+KA+ + S L SRS Q ++S + ++
Sbjct: 184 VQKAMELVVSHLRKFLVDRSVLQLFEFNVSFAGSRSIGYKVHNGELQRAMSSQVQGQQAA 243
Query: 234 SGSLVGPTAATPIVGIAPLMGPYGG--YKGDTA-----------GDWSRSLYSAPRDDLS 280
+ + + ATP V PY Y D A GD R ++
Sbjct: 244 A---IATSWATPTVAAT---TPYSSTDYYADQAQSQHYAVSVYGGDPGRVDVTSTTPAAP 297
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
++ S +L P+ +IG GA IN +R+ SGA I + + + I V
Sbjct: 298 AETVSQQLQVPLLYADAIIGTAGANINYMRRTSGATISIQETPNAPGEMTIEV 350
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 85/174 (48%), Gaps = 32/174 (18%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ P+ +G +IG+ G + ++ +E+ + IK+ + ++ VS+KE E T+S
Sbjct: 51 FRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLVSAKEDPEATISP 110
Query: 346 TIEAVVRLQPRCSE----------KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
++ ++R+ R +E I SGL+ +RLLV ++ G LIG+
Sbjct: 111 AMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQ--SRLLVTATQAGSLIGR-------- 160
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+E LP A DD MV++ G++ + A+ V++ LR L DR
Sbjct: 161 ------------QEELPLCALADDRMVEVQGEILKVQKAMELVVSHLRKFLVDR 202
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 101/175 (57%), Gaps = 11/175 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P ++V+R L +K+G++IGR GE +K++ ++K++I+I + PG ER V + SA DE
Sbjct: 117 PGESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMI-SAKDEP 175
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGGHQV-TAKLLVPSDQIGCVIGK 157
D V PA D L +VH+R+ + D+ G +LLVP+ Q G +IGK
Sbjct: 176 ------DALVPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIGK 229
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++I+ + +RIL E++P AL D +V+I GE V KA+ IA+ L
Sbjct: 230 QGTTIKSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPHDVHKAVELIANHL 282
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 89/173 (51%), Gaps = 8/173 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ +G +IG+ G I ++ ES A IK+ + + +S+K+ +
Sbjct: 119 ESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISAKDEPDAL 178
Query: 343 LSATIEAVVRLQPRCSEKIERDS------GLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ I+ ++R+ R ++ ++ ++ + TRLLVP S+ G LIGK G+ I ++
Sbjct: 179 VPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIGKQGTTIKSIQ 238
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+K +RIL EN+P +A DD +V+I G+ A+ + LR L DR
Sbjct: 239 DASKCALRIL--ENVPPVALNDDRVVEIQGEPHDVHKAVELIANHLRKFLVDR 289
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 110/190 (57%), Gaps = 11/190 (5%)
Query: 16 TDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSK 75
+D A H P+ +TG ++ P D V+R + P+ K+GSIIGR G+++K++ +T+++
Sbjct: 56 SDSAAHEPSN--HTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRAR 113
Query: 76 IRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
IR+ + G+ +RVV + + E+ + +SPA DA+ +V RV L +ED
Sbjct: 114 IRVLDGAVGTPDRVVLI-------SGKEELESPLSPAMDAVIRVFKRVSG--LSENEDEA 164
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
+ +LLV S Q +IGK G ++++I+ TGA +R+L + +P A + +V++
Sbjct: 165 KASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQ 224
Query: 196 GEASVVKKAL 205
GE+ V KAL
Sbjct: 225 GESLKVLKAL 234
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 92/165 (55%), Gaps = 2/165 (1%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I ++ +E+ A I+V + D ++ +S KE E LS
Sbjct: 83 FRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSP 142
Query: 346 TIEAVVRLQPRCSEKIE-RDSGLISF-TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
++AV+R+ R S E D SF + RLLV +++ LIGK GS+I ++ T A++
Sbjct: 143 AMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 202
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
R+L + +P A D+ MV++ G+ AL V+ LR L D
Sbjct: 203 RVLSGDEMPFYAGADERMVELQGESLKVLKALEGVVGHLRKFLVD 247
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/184 (35%), Positives = 106/184 (57%), Gaps = 13/184 (7%)
Query: 32 DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVT 91
D ++ P ++V+R L P +K+G++IGR GE +K++ +++++I++ + PG +R V
Sbjct: 104 DEKKWPGWPGESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVM 163
Query: 92 VYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD---GGHQVTAKLLVPS 148
+ SA DE +A + PA D L +VH R I + L G+ D G +LLVP+
Sbjct: 164 I-SAKDEPDA------PLPPAVDGLLRVHKR-ITDGLDGESDQPQRAAGTVGPTRLLVPA 215
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
Q G +IGK G +++I+ + +RIL E +P AL D +V+I GE V KA+ I
Sbjct: 216 SQAGSLIGKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELI 273
Query: 209 ASRL 212
AS L
Sbjct: 274 ASHL 277
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 97/175 (55%), Gaps = 12/175 (6%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G VIG+ G I ++ +ES A IKV D + +S+K+ +
Sbjct: 114 ESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKDEPDAP 173
Query: 343 LSATIEAVVRLQPRC-------SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
L ++ ++R+ R S++ +R +G + TRLLVP S+ G LIGK G+ I +
Sbjct: 174 LPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVG-PTRLLVPASQAGSLIGKQGATIKSI 232
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGD-LDLAKDALIQVMTRLRANLFDR 449
+ +K +RIL E++P +A DD +V+I G+ LD+ K A+ + + LR L DR
Sbjct: 233 QDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHK-AVELIASHLRKFLVDR 284
>gi|124359391|gb|ABN05855.1| KH, type 1 [Medicago truncatula]
Length = 222
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/173 (36%), Positives = 102/173 (58%), Gaps = 12/173 (6%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE- 103
+R LC +IG +IG+ G ++K L++ T +KIRI ++ S +RV+ V AS+
Sbjct: 50 FRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKVMV 109
Query: 104 -----DGDKF-VSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
DG+ VS AQ+AL +V DR+ +A E+ G E D V+ +L+ S Q G VI
Sbjct: 110 RSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGD--RTVSCRLVADSAQAGSVI 167
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
GKGG++V+ I+ +TG +I + KD +LP+C DE+++ S S+ A+ +I
Sbjct: 168 GKGGKVVEKIKKDTGCKIWVCKD-NLPACISSPDEVIECSASRSMFGSAVTRI 219
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 19/173 (10%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT-- 342
+ RL+C + IGGVIGK G +I ++ +GA I+++ S E D +I V +
Sbjct: 49 AFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKVM 108
Query: 343 ------------LSATIEAVVRLQPRCSEKIERDSGL----ISFTTRLLVPTSRIGCLIG 386
+S EA++R+ R E G+ + + RL+ +++ G +IG
Sbjct: 109 VRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRLVADSAQAGSVIG 168
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
KGG ++ ++++ T I + K+NLP S DE+++ S + A+ +++
Sbjct: 169 KGGKVVEKIKKDTGCKIWVC-KDNLPACISSPDEVIECSASRSMFGSAVTRIV 220
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 41/184 (22%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
GH V +LL S +IG VIGK G +++N++ TGA+IRI E P+ + D ++ +
Sbjct: 45 AGH-VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRI---EDSPNES--PDRVIMVI 98
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
G +++ K + RS AI S + L I+ +A M
Sbjct: 99 GASNIDGKVMV-----------RSHSGDGEAIEVSKAQEALL---RVFDRILEVAAEM-- 142
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
+G GD + S RLV A G VIGKGG ++ +I++++G
Sbjct: 143 ----EGIELGD---------------RTVSCRLVADSAQAGSVIGKGGKVVEKIKKDTGC 183
Query: 316 AIKV 319
I V
Sbjct: 184 KIWV 187
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 104/177 (58%), Gaps = 11/177 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R + P+ K+GSIIGR GE++K++ +T+++IR+ + G+ +R+V +
Sbjct: 75 PGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLI------- 127
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA-EELRGDEDSDGGHQV---TAKLLVPSDQIGCVI 155
+ E+ + +SPA DA+ +V RV E GD + G V + +LLV S Q +I
Sbjct: 128 SGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLI 187
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
GK G ++++I+ TGA +R+L + +P A + +V++ GEA V+KAL + L
Sbjct: 188 GKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHL 244
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 95/171 (55%), Gaps = 8/171 (4%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I ++ +E+ A I+V + D ++ +S +E E LS
Sbjct: 80 FRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISGREEPEAPLSP 139
Query: 346 TIEAVVRLQPRCSEKIERD--------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
++AV+R+ R + E + +G+ + RLLV +++ LIGK GS+I ++
Sbjct: 140 AMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQE 199
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A++R+L + +P A+ D+ +V++ G+ + AL V+ LR L D
Sbjct: 200 STGASVRVLSGDEVPFYAAADERIVELQGEALKVQKALEAVVGHLRKFLVD 250
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/312 (30%), Positives = 146/312 (46%), Gaps = 34/312 (10%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D V+R + KIG +IG+ G + QLR DT ++I+I + V E+RV+ + S +E
Sbjct: 92 DIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKGEEEEE 151
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA----KLLVPSDQIGCVIGK 157
S A+ AL ++ ++ E + G + +LL+ Q G +IG
Sbjct: 152 -------TSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGA 204
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRS--DELVQISGEASVVKKALCQIASRLHDN 215
G+ ++ IR+++GA I+IL P CA S D LVQISGE S V KAL I L ++
Sbjct: 205 SGKTIKEIRNDSGATIKILPQNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLREH 264
Query: 216 PSRSQ-HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
P R + + ++G +V P P Y G++ + + A
Sbjct: 265 PPREVISTRPTYYAGLSPANGLMVLPQTVLP---------GYNMQTGNSNYSYLGAAGRA 315
Query: 275 PRDDLSSK----EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
+S+ + ++ + P + GGVIGK G I+QIR SGA +KV E D
Sbjct: 316 AGGTISAAFALPKVTVEMKIPSSVAGGVIGKRGDNISQIRSLSGAIVKVIG---EKDGAT 372
Query: 331 ITVSSKEFFEDT 342
T+ FFE T
Sbjct: 373 RTI----FFEGT 380
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 12/173 (6%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
++ R+V IG VIGK G+ INQ+R+++GA IK+ T +D +I +SSK E+
Sbjct: 91 RDIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKGEEEE 150
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTT--------RLLVPTSRIGCLIGKGGSIIT 393
SA +A++++ E+ S T RLL+ S+ G LIG G I
Sbjct: 151 ETSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGASGKTIK 210
Query: 394 EMRRLTKANIRILPKENLPKI---ASEDDEMVQISGDLDLAKDALIQVMTRLR 443
E+R + A I+ILP +NL I ASE D +VQISG++ AL + LR
Sbjct: 211 EIRNDSGATIKILP-QNLSPICASASETDRLVQISGEVSQVLKALDHIGVTLR 262
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 77/192 (40%), Gaps = 68/192 (35%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G + +++V S++IG VIGK G + +R +TGA+I+I P L D ++ IS
Sbjct: 90 GRDIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIAD----PVTPL-EDRVIIISS 144
Query: 197 E------ASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG-- 248
+ S ++AL QIA+ + + G ++AT VG
Sbjct: 145 KGEEEEETSAAEQALIQIATVILEES----------------------GESSATAKVGTR 182
Query: 249 -IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
+ P M +RL+ + G +IG G I
Sbjct: 183 HVGPNM--------------------------------MRLLIAGSQAGSLIGASGKTIK 210
Query: 308 QIRQESGAAIKV 319
+IR +SGA IK+
Sbjct: 211 EIRNDSGATIKI 222
>gi|7671433|emb|CAB89374.1| putative protein [Arabidopsis thaliana]
Length = 567
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 141/528 (26%), Positives = 234/528 (44%), Gaps = 102/528 (19%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP---------------GS 85
E +R LC + + G +IG+ G +VK+L T+S I + +T P GS
Sbjct: 28 EYVTFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKT-PLDDSPYRIIKIFGHVGS 86
Query: 86 EERV---VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
RV V V + S+ ++ + VS AQ AL +V + + GD S V+
Sbjct: 87 VSRVKLGVIVNNVSNREKKEQEQEVEVSRAQYALIRVFEALNF----GDCTSST---VSC 139
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR----SDELVQISGE- 197
LL+ + VIGK G+++Q I ETG ++K S + R + +I G
Sbjct: 140 NLLMEGSHVVTVIGKNGELMQRILEETGCN-SLIKALLFGSSSCRIIHGTYARDKIEGNR 198
Query: 198 ASVVKKALCQIASRLHDNPSRSQ-HLLASAISNS-----------------------H-- 231
S V KAL I+SRL P S L A A+ ++ H
Sbjct: 199 LSAVMKALVSISSRLQACPPISTASLHAEAVPDALRRPMEYRSQQYREVDPHGSLHRHVE 258
Query: 232 -SSSGSLVGP---TAATPIVGIAPLMGPYGGYKGDTAGDWS-----RSLYSAPRDDLSSK 282
S +LV P T P + P P ++ T+ + + A +DD+ +
Sbjct: 259 ISQEDALVRPFFRTITQPRIDYLP--HPSYDHRLITSASKNPPVTIKQPLQASKDDI--R 314
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ L+++C + +++ + R + A+I V + D+ L+T+++ E +D
Sbjct: 315 QVDLKILCS--------NESASVVIKTRSVTDASISVGDRHPDCDERLVTITAFEKTKDI 366
Query: 343 LSATIEAVVRLQPRCSEKIER---DSGLIS-FTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
S + A+V + E DSGL S T RL+V +++I CL+G+ G I T +++
Sbjct: 367 TSESQRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEEGRIKTTIQQR 426
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR------EGA 452
T A I +L E PK SE++++VQISG+ ++A+ QV + LR +L ++ + A
Sbjct: 427 TGAFITVLNVEQNPKCVSENNQVVQISGEFPNVREAINQVTSMLREDLINQSFQRGSQYA 486
Query: 453 VS--------TFVPVLPYIPV-----SENGSDGLNYESRDSKRHGRGP 487
V+ F P Y P + + +D +Y S+ S R P
Sbjct: 487 VNYSEDPFPELFSPTAGYTPTFGRSSTMDPNDIFHYSSQASSRLWESP 534
>gi|376338927|gb|AFB33992.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338929|gb|AFB33993.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338931|gb|AFB33994.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338933|gb|AFB33995.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
Length = 86
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 67/85 (78%), Gaps = 1/85 (1%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
TT+LL+P+++ GCL+GKGG+II+EMR+ T+ANIRILPKE+LP A + DEMVQI GD+
Sbjct: 3 ITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDIR 62
Query: 430 LAKDALIQVMTRLRANLFDREGAVS 454
A+ AL+QV +RLR + RE +S
Sbjct: 63 AARAALVQVTSRLR-SFIHREIGIS 86
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 52/74 (70%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T KLL+PS+Q GC++GKGG I+ +R +T A IRIL E LP CAL SDE+VQI G+
Sbjct: 3 ITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDIR 62
Query: 200 VVKKALCQIASRLH 213
+ AL Q+ SRL
Sbjct: 63 AARAALVQVTSRLR 76
>gi|356528013|ref|XP_003532600.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 167
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/151 (41%), Positives = 96/151 (63%), Gaps = 10/151 (6%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LC ++G+IIG+ G ++K L+ T +KIRI + P S +RV+ V + S ED
Sbjct: 27 FRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAPS----VTED 82
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
G+ +S AQ+AL KV DRV+ + G E D V+ +LL + Q+G VIGK G++V+
Sbjct: 83 GE--LSTAQEALLKVFDRVL-DVAAGTEVGD--LVVSCRLLAETSQVGAVIGKAGKVVEK 137
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQIS 195
IR +TG +IR+L +E LP+ SDE+V++S
Sbjct: 138 IRMDTGCKIRVL-NEGLPAGTAPSDEIVEVS 167
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 83/147 (56%), Gaps = 3/147 (2%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
+ + RL+C + +G +IGK G +I +++ +GA I++ + + D +I VS+ E
Sbjct: 22 TTHVTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAPSVTE 81
Query: 341 D-TLSATIEAVVRLQPRCSEKIE-RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
D LS EA++++ R + + G + + RLL TS++G +IGK G ++ ++R
Sbjct: 82 DGELSTAQEALLKVFDRVLDVAAGTEVGDLVVSCRLLAETSQVGAVIGKAGKVVEKIRMD 141
Query: 399 TKANIRILPKENLPKIASEDDEMVQIS 425
T IR+L E LP + DE+V++S
Sbjct: 142 TGCKIRVL-NEGLPAGTAPSDEIVEVS 167
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK--DEHLPSCALRSDELVQISG 196
VT +LL + ++G +IGK G ++++++ TGA+IRI+ + L S V G
Sbjct: 24 HVTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAPSVTEDG 83
Query: 197 EASVVKKALCQIASRLHD 214
E S ++AL ++ R+ D
Sbjct: 84 ELSTAQEALLKVFDRVLD 101
>gi|449445515|ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
gi|449529952|ref|XP_004171961.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
Length = 276
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 115/213 (53%), Gaps = 11/213 (5%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D ++R + P ++IG +IG+ G ++++R +TK+ I+I + V EERV+ + S+ D N+
Sbjct: 68 DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSKDNENS 126
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGCVIGKGG 159
D +K + + K D EEL+ GH T +LL+ Q G +IG G
Sbjct: 127 VTDAEKALQQIAALILK-EDGSSIEELK----VGTGHVAANTIRLLIAGSQAGSLIGASG 181
Query: 160 QIVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
Q ++ +R+ +GA I IL LP C A SD +VQISG+ V KAL +I ++L NP
Sbjct: 182 QNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLRVNPP 241
Query: 218 RSQHLLASAIS-NSHSSSGSLVGPTAATPIVGI 249
R ++ + N+ S + PT+ PI+ +
Sbjct: 242 RQVISVSPTYNYNTMHPPQSYMDPTSGKPILQL 274
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 9/182 (4%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
SAP+ + + R+V P IG VIGK G I ++R+E+ A IK+ + ++ +I
Sbjct: 58 SAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVII 117
Query: 333 VSSKEF------FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT-RLLVPTSRIGCLI 385
+SSK+ E L +++ E+++ +G ++ T RLL+ S+ G LI
Sbjct: 118 ISSKDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLI 177
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIAS--EDDEMVQISGDLDLAKDALIQVMTRLR 443
G G I ++R + A+I IL LP AS E D +VQISGD+ AL ++ +LR
Sbjct: 178 GASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR 237
Query: 444 AN 445
N
Sbjct: 238 VN 239
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS- 195
H V +++VPS QIG VIGK G +Q +R ET A I+I + A + ++ IS
Sbjct: 66 AHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIAD-----AVARYEERVIIISS 120
Query: 196 --GEASVV--KKALCQIASRL 212
E SV +KAL QIA+ +
Sbjct: 121 KDNENSVTDAEKALQQIAALI 141
>gi|356530338|ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 110/193 (56%), Gaps = 18/193 (9%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P ++R+ G P D V+R + P+ K+GSIIGR GE++K++ +T+S+IR+ +
Sbjct: 41 PPEKRWPG--------WPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAP 92
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQV 140
G+ +R+V V + ED + +SPA DA+ ++ RV +E +++S G
Sbjct: 93 LGTPDRIVLV-------SGKEDPEAALSPAMDAVVRIFKRVSGFSETDAENQESAAGLAF 145
Query: 141 TA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
++ +LLV S Q +IGK G ++++I+ T A +R+L + + A ++ +V+I GEA
Sbjct: 146 SSIRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQFYATANERIVEIQGEAL 205
Query: 200 VVKKALCQIASRL 212
V KAL + L
Sbjct: 206 KVLKALEAVVGHL 218
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 7/170 (4%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I ++ +E+ + I+V + D ++ VS KE E LS
Sbjct: 55 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEDPEAALSP 114
Query: 346 TIEAVVRLQPRCS-------EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++AVVR+ R S E E +GL + RLLV +++ LIGK GS+I ++
Sbjct: 115 AMDAVVRIFKRVSGFSETDAENQESAAGLAFSSIRLLVASTQAINLIGKQGSLIKSIQEN 174
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A++R+L + + A+ ++ +V+I G+ AL V+ LR L D
Sbjct: 175 TSASVRVLSGDEVQFYATANERIVEIQGEALKVLKALEAVVGHLRKFLVD 224
>gi|356556240|ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 112/205 (54%), Gaps = 18/205 (8%)
Query: 12 SHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRID 71
+ S A P ++R+ G P D V+R + P+ K+GSIIGR GE++K++ +
Sbjct: 29 TESNAAAAASTPPEKRWPG--------WPGDCVFRLIVPVGKVGSIIGRKGELIKKMCEE 80
Query: 72 TKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV--IAE-EL 128
T+S+IR+ + G+ +R+V V + E+ + +SPA DA+ ++ RV ++E +
Sbjct: 81 TRSRIRVLDAPLGTPDRIVLV-------SGKEEPEAALSPAMDAVVRIFKRVSGLSETDA 133
Query: 129 RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
E + G + +LLV S Q +IGK G ++++I+ T A +R+L + + S A
Sbjct: 134 ENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQSYATVD 193
Query: 189 DELVQISGEASVVKKALCQIASRLH 213
+ +V+I GEA V KAL + L
Sbjct: 194 ERIVEIQGEALKVLKALEAVVGHLR 218
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 99/192 (51%), Gaps = 15/192 (7%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I ++ +E+ + I+V + D ++ VS KE E LS
Sbjct: 54 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEEPEAALSP 113
Query: 346 TIEAVVRLQPRCS-------EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++AVVR+ R S E E +GL + RLLV +++ LIGK GS+I ++
Sbjct: 114 AMDAVVRIFKRVSGLSETDAENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSIQEN 173
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
T A++R+L + + A+ D+ +V+I G+ AL V+ LR L D
Sbjct: 174 TSASVRVLSGDEVQSYATVDERIVEIQGEALKVLKALEAVVGHLRKFLVDHS-------- 225
Query: 459 VLPYIPVSENGS 470
VLP + N S
Sbjct: 226 VLPLFEKTYNAS 237
>gi|413955216|gb|AFW87865.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 102/180 (56%), Gaps = 16/180 (8%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L TK+++RI E G+ ER+V V
Sbjct: 37 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLV------- 89
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI-----AEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ ED +SPA DAL +V RVI A E G + + A+LLVP Q +
Sbjct: 90 SGKEDPGLELSPAMDALMRVFKRVIGITDGAAE--GTQAAATPGVCAARLLVPGAQAINL 147
Query: 155 IGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
IGK G ++ I+ TGA IR++ DEH + DE +V+I G+ V KAL +++ L
Sbjct: 148 IGKQGATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHL 207
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ + + A +++ + ++ VS KE LS
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELSP 101
Query: 346 TIEAVVRLQPR-------CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R +E + + RLLVP ++ LIGK G+ I ++
Sbjct: 102 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQES 161
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A IR++ + P ++D+ +V+I GD + AL V LR L D
Sbjct: 162 TGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVD 213
>gi|226502036|ref|NP_001148766.1| nucleic acid binding protein [Zea mays]
gi|195621990|gb|ACG32825.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 102/180 (56%), Gaps = 16/180 (8%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L TK+++RI E G+ ER+V V
Sbjct: 37 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLV------- 89
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI-----AEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ ED +SPA DAL +V RVI A E G + + A+LLVP Q +
Sbjct: 90 SGKEDPGLELSPAMDALMRVFKRVIGITDGAAE--GTQAAATPGVCAARLLVPGAQAINL 147
Query: 155 IGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
IGK G ++ I+ TGA IR++ DEH + DE +V+I G+ V KAL +++ L
Sbjct: 148 IGKQGATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHL 207
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ + + A +++ + ++ VS KE LS
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELSP 101
Query: 346 TIEAVVRLQPR-------CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R +E + + RLLVP ++ LIGK G+ I ++
Sbjct: 102 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQES 161
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A IR++ + P ++D+ +V+I GD + AL V LR L D
Sbjct: 162 TGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVD 213
>gi|414867775|tpg|DAA46332.1| TPA: nucleic acid binding protein [Zea mays]
Length = 448
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 101/180 (56%), Gaps = 16/180 (8%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L +TK+++RI E G+ ER+V V
Sbjct: 43 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLV------- 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI-----AEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ ED D + PA DAL +V RV A E G + + A+LLVP Q +
Sbjct: 96 SGKEDPDLELPPAMDALMRVFKRVTGITDGAAE--GTQAAATPDVCAARLLVPGAQAINL 153
Query: 155 IGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
IGK G ++ I+ T A IR++ DEH + DE +V+I G+ V KAL +++ L
Sbjct: 154 IGKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHL 213
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ +E+ A +++ + ++ VS KE + L
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELPP 107
Query: 346 TIEAVVRLQPRCS-------EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R + E + + RLLVP ++ LIGK G+ I ++
Sbjct: 108 AMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQES 167
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A IR++ + P ++D+ +V+I GD + AL V LR L D
Sbjct: 168 TSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVD 219
>gi|219888687|gb|ACL54718.1| unknown [Zea mays]
Length = 448
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 101/180 (56%), Gaps = 16/180 (8%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L +TK+++RI E G+ ER+V V
Sbjct: 43 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLV------- 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI-----AEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ ED D + PA DAL +V RV A E G + + A+LLVP Q +
Sbjct: 96 SGKEDPDLELPPAMDALMRVFKRVTGITDGAAE--GTQAAATPDVCAARLLVPGAQAINL 153
Query: 155 IGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
IGK G ++ I+ T A IR++ DEH + DE +V+I G+ V KAL +++ L
Sbjct: 154 IGKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHL 213
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 9/172 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ +E+ A +++ + ++ VS KE + L
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELPP 107
Query: 346 TIEAVVRLQPRCS-------EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R + E + + RLLVP ++ LIGK G+ I ++
Sbjct: 108 AMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQES 167
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A IR++ + P ++D+ +V+I GD + AL V LR L D
Sbjct: 168 TSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVD 219
>gi|223945455|gb|ACN26811.1| unknown [Zea mays]
Length = 126
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/118 (49%), Positives = 76/118 (64%), Gaps = 3/118 (2%)
Query: 421 MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDS 480
MVQI+G LD+A++AL+Q+ TRL+AN F+REG++S F PV+PY P+ SD Y RD+
Sbjct: 1 MVQITGGLDVARNALVQIATRLKANFFEREGSLSAFPPVIPYHPLPAGVSDEPKYLGRDT 60
Query: 481 KRHGRGPPYGGYGSSD-LAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRSGSGLSSHA 537
K G G+ +SD DSY SYG SQ G G YG+Y YS+ S SGLS H+
Sbjct: 61 KPVGHYLYSSGFRTSDDTIPSDSYASYGGSQAPGRG--YGAYSGYSARSSNSGLSGHS 116
>gi|15236094|ref|NP_194330.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|4538929|emb|CAB39665.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|7269451|emb|CAB79455.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|15810499|gb|AAL07137.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|20466386|gb|AAM20510.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|21280915|gb|AAM45112.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|332659742|gb|AEE85142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 495
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 146/317 (46%), Gaps = 42/317 (13%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R + P+ K+G+IIGR G+ +K++ +T+++I++ + + +R+V +
Sbjct: 71 PGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI------- 123
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGCVIGK 157
+ E+ + ++SPA DA+ +V RV D+D V + +LLV S Q +IGK
Sbjct: 124 SGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGK 183
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD--- 214
G ++++I +GA +RIL +E P A + + +V + GEA + KAL I L
Sbjct: 184 QGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLV 243
Query: 215 ----------------NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL------ 252
+ +R + LA + S+ H+ S +L+ P + + PL
Sbjct: 244 DHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNLMEPDFSL-LARREPLFLERDS 302
Query: 253 -----MGPYGG--YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAI 305
+ P G Y D S A + S + P + +IG GA
Sbjct: 303 RVDSRVQPSGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEGAN 362
Query: 306 INQIRQESGAAIKVDSS 322
I IR+ SGA I + S
Sbjct: 363 IAYIRRRSGATITIKES 379
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 11/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ PV +G +IG+ G I ++ +E+ A IKV D ++ +S KE E +S
Sbjct: 76 FRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSP 135
Query: 346 TIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++AV+R+ R S + D +G + + RLLV +++ LIGK GS+I + +
Sbjct: 136 AMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVENS 195
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
A++RIL +E P A++D+ +V + G+ AL ++ LR L D T VP+
Sbjct: 196 GASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRRFLVDH-----TVVPL 250
Query: 460 L 460
Sbjct: 251 F 251
>gi|356549146|ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 98/175 (56%), Gaps = 8/175 (4%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P V+R + P+ K+GSIIGR GE++K+ +TK++IR+ + G+ +R+V +
Sbjct: 43 PGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLI------- 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA-EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+ ED + +SPA DA+ +V RV E+ + + +LLV S Q +IGK
Sbjct: 96 SGKEDLEAPLSPAMDAVIRVFKRVSGFSEIDAKNKASAVAFCSVRLLVASTQAINLIGKQ 155
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
G ++++I+ TGA +R+L + +P A + +V++ GEA V KAL + L
Sbjct: 156 GSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLR 210
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 94/168 (55%), Gaps = 5/168 (2%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I + +E+ A I+V + D ++ +S KE E LS
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEDLEAPLSP 107
Query: 346 TIEAVVRLQPRCSEKIERD----SGLISF-TTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
++AV+R+ R S E D + ++F + RLLV +++ LIGK GS+I ++ T
Sbjct: 108 AMDAVIRVFKRVSGFSEIDAKNKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTG 167
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
A++R+L + +P A+ D+ +V++ G+ AL V+ LR L D
Sbjct: 168 ASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVD 215
>gi|361066701|gb|AEW07662.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158160|gb|AFG61426.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158161|gb|AFG61427.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158162|gb|AFG61428.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158163|gb|AFG61429.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158164|gb|AFG61430.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158166|gb|AFG61432.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158167|gb|AFG61433.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158168|gb|AFG61434.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158169|gb|AFG61435.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158170|gb|AFG61436.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158171|gb|AFG61437.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158172|gb|AFG61438.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158173|gb|AFG61439.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158174|gb|AFG61440.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158175|gb|AFG61441.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158176|gb|AFG61442.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158177|gb|AFG61443.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/123 (48%), Positives = 82/123 (66%), Gaps = 6/123 (4%)
Query: 103 EDGDKF--VSPAQDALFKVHDRVIAEE---LRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
EDGD+ + PAQDAL +VH VIA+E D D+D Q A+LLV + QIG +IGK
Sbjct: 8 EDGDENEPICPAQDALLRVHS-VIAQESSVKDKDNDADKKGQQNARLLVANSQIGSLIGK 66
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG +Q +R+E+GAQI+I + + LP CA DELV ISG+A VKKAL +++ L+ +P
Sbjct: 67 GGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVSAFLYKHPP 126
Query: 218 RSQ 220
+ Q
Sbjct: 127 KEQ 129
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 42/72 (58%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
RLLV S+IG LIGKGG+ I +MR + A I+I K+ LP A DE+V ISGD
Sbjct: 50 NARLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKA 109
Query: 431 AKDALIQVMTRL 442
K AL V L
Sbjct: 110 VKKALYSVSAFL 121
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 13/187 (6%)
Query: 29 TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEER 88
T D ++ P ++V+R L P K+G++IGR G+ +K++ +++++I++ E P ER
Sbjct: 93 TVPDDKKWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPER 152
Query: 89 VVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVT---AKLL 145
V + SA DE D + PA D L +VH R I + L + D V +LL
Sbjct: 153 AVMI-SAKDEP------DTELPPAVDGLLRVHRR-ITDGLETETDQPQRATVNTGPTRLL 204
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
VP+ Q G +IGK G +++I+ + +RI+ E++P AL D +V+I GE KA+
Sbjct: 205 VPASQAGSLIGKQGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAV 262
Query: 206 CQIASRL 212
IAS L
Sbjct: 263 ELIASHL 269
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 8/173 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G VIG+ G I ++ +ES A IKV + + +S+K+ +
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 343 LSATIEAVVRLQPRCSEKIERDSG------LISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
L ++ ++R+ R ++ +E ++ + + TRLLVP S+ G LIGK G+ I ++
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQ 225
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+K +RI+ EN+P +A DD +V+I G+ + A+ + + LR L DR
Sbjct: 226 DASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFLVDR 276
>gi|414868822|tpg|DAA47379.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 499
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 13/187 (6%)
Query: 29 TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEER 88
T D ++ P ++V+R L P K+G++IGR G+ +K++ +++++I++ E P ER
Sbjct: 93 TVPDDKKWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPER 152
Query: 89 VVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVT---AKLL 145
V + SA DE D + PA D L +VH R I + L + D V +LL
Sbjct: 153 AVMI-SAKDEP------DTELPPAVDGLLRVHRR-ITDGLETETDQPQRATVNTGPTRLL 204
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
VP+ Q G +IGK G +++I+ + +RI+ E++P AL D +V+I GE KA+
Sbjct: 205 VPASQAGSLIGKQGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAV 262
Query: 206 CQIASRL 212
IAS L
Sbjct: 263 ELIASHL 269
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 8/173 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G VIG+ G I ++ +ES A IKV + + +S+K+ +
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 343 LSATIEAVVRLQPRCSEKIERDSG------LISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
L ++ ++R+ R ++ +E ++ + + TRLLVP S+ G LIGK G+ I ++
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQ 225
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+K +RI+ EN+P +A DD +V+I G+ + A+ + + LR L DR
Sbjct: 226 DASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFLVDR 276
>gi|297803502|ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
gi|297315471|gb|EFH45894.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/316 (26%), Positives = 147/316 (46%), Gaps = 40/316 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R + P+ K+G+IIGR G+ +K++ +T+++I++ + + +R+V +
Sbjct: 71 PGDCVFRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI------- 123
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDED--SDGGHQVTAKLLVPSDQIGCVIGK 157
+ E+ + ++SPA DA+ +V RV D+D + G + +LLV S Q +IGK
Sbjct: 124 SGKEEPEAYMSPAMDAVLRVFRRVSGLPDNDDDDVQNAGSAFCSVRLLVASTQAINLIGK 183
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD--- 214
G ++++I +GA +RIL +E P A + + +V + GEA + KAL I L
Sbjct: 184 QGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRKFLV 243
Query: 215 ----------------NPSRSQHLLASAISNSHSSSGSLVGPTAAT-----PIV-----G 248
+ +R + LA + S+ H+ S +++ P + P+
Sbjct: 244 DHTVVPLFEKQYLARVSQTRQEEPLAESKSSLHTISSNVIEPDFSLLARRDPLFLDRDAR 303
Query: 249 IAPLMGPYGG--YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAII 306
+ + P G Y D S A + S + P + +IG GA I
Sbjct: 304 VESRVQPTGVSIYSQDPVLSARHSPGLARVSSAFVTQVSQTMQIPFSYAEDIIGVEGANI 363
Query: 307 NQIRQESGAAIKVDSS 322
IR+ SGA I + S
Sbjct: 364 AYIRRRSGATITIKES 379
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 95/181 (52%), Gaps = 11/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ PV+ +G +IG+ G I ++ +E+ A IKV D ++ +S KE E +S
Sbjct: 76 FRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSP 135
Query: 346 TIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++AV+R+ R S + D +G + RLLV +++ LIGK GS+I + +
Sbjct: 136 AMDAVLRVFRRVSGLPDNDDDDVQNAGSAFCSVRLLVASTQAINLIGKQGSLIKSIVENS 195
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
A++RIL +E P A++D+ +V + G+ AL ++ LR L D T VP+
Sbjct: 196 GASVRILSEEETPFYAAQDERIVDLQGEALKILKALEAIVGHLRKFLVDH-----TVVPL 250
Query: 460 L 460
Sbjct: 251 F 251
>gi|357117002|ref|XP_003560265.1| PREDICTED: uncharacterized protein LOC100827626 [Brachypodium
distachyon]
Length = 656
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 104/365 (28%), Positives = 178/365 (48%), Gaps = 60/365 (16%)
Query: 109 VSPAQDALFKVHD------RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
+SPAQ+AL V D RV+A R E V+ +LV + + +G+G +
Sbjct: 114 LSPAQEALVSVVDVGGVLHRVVA---RAPE------FVSCLVLVEAAGLE-ALGRG--TL 161
Query: 163 QNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
+ I SET A++R+ L + PS E+++I+G+ + ++KA+ ++S L +
Sbjct: 162 EAIASETNAELRVTSLAEGATPSVH-SPKEVIEITGDRTTIRKAIVALSSYLQGD----- 215
Query: 221 HLLASAISNSHSSSGSLVGPTAATPI-------------VGIAPLMGPYGGYKGDTAGDW 267
L A +++ S ++ + P ++ + A + P+ D AG+
Sbjct: 216 -LHACSLTTSVTTPSPMF-PWKSSEVPEPNYGDLHSGVSTKCANINVPWIDCPQDVAGNV 273
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
+ ++ S RL+C V GG+IGK G II E+GA+I V + +
Sbjct: 274 ETE---------NLQQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCM 324
Query: 328 DCLITVSSKEF---FEDTLSATIEAVVRLQPRCSEKIERD--SGLISFTTRLLVPTSRIG 382
+ +IT+S+ E SA + R+ E++ER+ G + R+LVP S+
Sbjct: 325 ERVITISALESPGKHSKVQSAILCIFDRM-----EEVERNLMFGKPECSARVLVPKSQFS 379
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
L+G GG+II EM + T A I IL + ++P AS + ++QI+G+L +DAL V +L
Sbjct: 380 SLVGLGGAIIKEMVKSTGARIEILDEMDVPACASNCERVLQITGNLVNVRDALFVVSEKL 439
Query: 443 RANLF 447
R + F
Sbjct: 440 RNHAF 444
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 92/171 (53%), Gaps = 11/171 (6%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LC + G +IG+ G I+K +T + I +G G ERV+T+ +A E
Sbjct: 283 FRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITI-------SALES 335
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
K S Q A+ + DR+ EE+ + G + +A++LVP Q ++G GG I++
Sbjct: 336 PGKH-SKVQSAILCIFDRM--EEVERNL-MFGKPECSARVLVPKSQFSSLVGLGGAIIKE 391
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
+ TGA+I IL + +P+CA + ++QI+G V+ AL ++ +L ++
Sbjct: 392 MVKSTGARIEILDEMDVPACASNCERVLQITGNLVNVRDALFVVSEKLRNH 442
>gi|224121400|ref|XP_002330818.1| predicted protein [Populus trichocarpa]
gi|222872620|gb|EEF09751.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 130/270 (48%), Gaps = 26/270 (9%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R + P+ K+GSIIGR GE+VK++ +T+++IRI E G +R+V + S +E
Sbjct: 8 PGDNVFRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLI-SGKEEP 66
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-----------VTAKLLVPS 148
A + SPA DA+ +V RV G +G + + +LLV S
Sbjct: 67 EAPQ------SPAMDAVMRVFKRV-----SGLSPGEGDNTGSAAAAAGSAFCSIRLLVAS 115
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
Q +IGK G I+++I+ TGA + ++ ++ LPS A + +V+I GEA V KAL +
Sbjct: 116 SQAINLIGKQGSIIKSIQENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAV 175
Query: 209 ASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-GGYKGDTAGDW 267
+L H + +++++ S P A P + L Y A D+
Sbjct: 176 IGQLRKF--LVDHSVIPIFEKTYNATISQECPADARPDIAQPSLHSAYVPTIPSGIASDY 233
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGG 297
S S P +F ++ P +I G
Sbjct: 234 SLSFKRDPSIYEHETQFEHKISQPGLSIYG 263
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 89/174 (51%), Gaps = 10/174 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ P++ +G +IG+ G ++ ++ E+ A I++ D ++ +S KE E S
Sbjct: 13 FRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLISGKEEPEAPQSP 72
Query: 346 TIEAVVRLQPRCS----------EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
++AV+R+ R S +G + RLLV +S+ LIGK GSII +
Sbjct: 73 AMDAVMRVFKRVSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIKSI 132
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ T A + ++ ++ LP A+ D+ +V+I G+ AL V+ +LR L D
Sbjct: 133 QENTGAAVHVMAEDELPSYATSDERIVEIHGEAMKVFKALEAVIGQLRKFLVDH 186
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 103/187 (55%), Gaps = 13/187 (6%)
Query: 29 TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEER 88
T D ++ P ++V+R L P K+G++IGR G+ +K++ +++++I++ E P ER
Sbjct: 93 TVPDDKKWPGWPGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPER 152
Query: 89 VVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVT---AKLL 145
V + SA DE D + PA D L +VH R I + L + D V +LL
Sbjct: 153 AVMI-SAKDEP------DTELPPAVDGLLRVHRR-ITDGLETETDQPQRATVNTGPTRLL 204
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
VP+ Q G +IGK G +++I+ + +RI+ E++P AL D +V+I GE KA+
Sbjct: 205 VPASQAGSLIGKQGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAV 262
Query: 206 CQIASRL 212
IAS L
Sbjct: 263 ELIASHL 269
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 94/173 (54%), Gaps = 8/173 (4%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E R++ P +G VIG+ G I ++ +ES A IKV + + +S+K+ +
Sbjct: 106 ESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDTE 165
Query: 343 LSATIEAVVRLQPRCSEKIERDSG------LISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
L ++ ++R+ R ++ +E ++ + + TRLLVP S+ G LIGK G+ I ++
Sbjct: 166 LPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSIQ 225
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+K +RI+ EN+P +A DD +V+I G+ + A+ + + LR L DR
Sbjct: 226 DASKCVLRIV--ENVPPVALNDDRVVEIQGEPHDSHKAVELIASHLRKFLVDR 276
>gi|12597878|gb|AAG60186.1|AC084763_6 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|31433543|gb|AAP55041.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|125532979|gb|EAY79544.1| hypothetical protein OsI_34673 [Oryza sativa Indica Group]
gi|125575714|gb|EAZ16998.1| hypothetical protein OsJ_32483 [Oryza sativa Japonica Group]
gi|215769329|dbj|BAH01558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 458
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/178 (36%), Positives = 100/178 (56%), Gaps = 12/178 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L +TK+K+R+ E G+ ER+V V + E
Sbjct: 53 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLV--SGKED 110
Query: 100 NAFEDGDKFVSPAQDALFKVHDRV--IAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
A E + PA DAL +V RV I + G + + A+LLVP Q +IG
Sbjct: 111 PALE-----LPPAMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIG 165
Query: 157 KGGQIVQNIRSETGAQIRILK--DEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G ++ I+ TGA IR++ + P + + +V+I GE V KAL +++ L
Sbjct: 166 KQGASIKAIQEGTGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHL 223
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 84/172 (48%), Gaps = 9/172 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ +E+ A ++V + ++ VS KE L
Sbjct: 58 FRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGKEDPALELPP 117
Query: 346 TIEAVVRLQPRCS-------EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R S E + + RLLVP ++ LIGK G+ I ++
Sbjct: 118 AMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIGKQGASIKAIQEG 177
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A IR++ + P ED+ +V+I G+ + AL V LR L D
Sbjct: 178 TGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKALQAVSNHLRKFLVD 229
>gi|383158165|gb|AFG61431.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/123 (47%), Positives = 82/123 (66%), Gaps = 6/123 (4%)
Query: 103 EDGDKF--VSPAQDALFKVHDRVIAEE---LRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+DGD+ + PAQDAL +VH VIA+E D D+D Q A+LLV + QIG +IGK
Sbjct: 8 DDGDENEPICPAQDALLRVHS-VIAQESSVKDKDNDADKKGQQNARLLVANSQIGSLIGK 66
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG +Q +R+E+GAQI+I + + LP CA DELV ISG+A VKKAL +++ L+ +P
Sbjct: 67 GGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKALYSVSAFLYKHPP 126
Query: 218 RSQ 220
+ Q
Sbjct: 127 KEQ 129
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 42/72 (58%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
RLLV S+IG LIGKGG+ I +MR + A I+I K+ LP A DE+V ISGD
Sbjct: 50 NARLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKA 109
Query: 431 AKDALIQVMTRL 442
K AL V L
Sbjct: 110 VKKALYSVSAFL 121
>gi|357507881|ref|XP_003624229.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355499244|gb|AES80447.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 275
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 102/178 (57%), Gaps = 14/178 (7%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+D ++R + P ++IG +IG+ G ++++R T++ I+I + + EERV+ + S
Sbjct: 98 QDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISS------ 151
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD--GGHQV--TAKLLVPSDQIGCVIG 156
+D D+ V+ A+ AL ++ + ++ E+ + S GH T +LL+ Q G +IG
Sbjct: 152 --KDNDEMVTDAEKALEQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIG 209
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIASRL 212
GQ ++ +R+ +GA I +L LP C A SD +VQ+SG+ S V KAL +I +L
Sbjct: 210 MSGQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSGDVSTVMKALEEIGCQL 267
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 20/214 (9%)
Query: 251 PLMGPYGGYKGDTAGDWSR-----SLYSAPRDDLSS------KEFSLRLVCPVANIGGVI 299
PL PY + R L +A +LS+ ++ R+V P IG VI
Sbjct: 56 PLQLPYSTHDAGYPSSMKRRRDDEDLGTASSAELSAAKRAKGQDVIFRIVVPSKQIGKVI 115
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA--TIEAVVRLQPRC 357
GK G I +IR+ + A IK+ + ++ +I +SSK+ E A +E + L +
Sbjct: 116 GKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDNDEMVTDAEKALEQIANLILKE 175
Query: 358 SEKIERDSGLI-----SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
S L + T RLL+ S+ G LIG G I ++R + A I +L LP
Sbjct: 176 DNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMSGQNIEKLRNSSGAMITVLAPSQLP 235
Query: 413 KIAS--EDDEMVQISGDLDLAKDALIQVMTRLRA 444
AS E D +VQ+SGD+ AL ++ +LR+
Sbjct: 236 LCASAHESDRVVQLSGDVSTVMKALEEIGCQLRS 269
Score = 38.5 bits (88), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 25/39 (64%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
G V +++VPS QIG VIGK G +Q IR T A I+I
Sbjct: 97 GQDVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKI 135
>gi|255554418|ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 451
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 59/176 (33%), Positives = 100/176 (56%), Gaps = 9/176 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D V+R + P+ K+GSIIGR G+++K++ +T+++IR+ + G+ +RVV +
Sbjct: 58 PGDCVFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLI------- 110
Query: 100 NAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+ ED + +SPA DA+ +V RV + E + + G + +LLV S Q +IGK
Sbjct: 111 SGKEDVEAPLSPAMDAVIRVFKRVSGLPEGNAQELGAAGIAFSSIRLLVASTQAINLIGK 170
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
G I+++I+ TGA +R+L + +P + +V + GEA V +AL I L
Sbjct: 171 QGSIIKSIQESTGASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHLR 226
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 93/169 (55%), Gaps = 6/169 (3%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I ++ E+ A I+V + D ++ +S KE E LS
Sbjct: 63 FRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLISGKEDVEAPLSP 122
Query: 346 TIEAVVRLQPRCS-----EKIERDSGLISFTT-RLLVPTSRIGCLIGKGGSIITEMRRLT 399
++AV+R+ R S E + I+F++ RLLV +++ LIGK GSII ++ T
Sbjct: 123 AMDAVIRVFKRVSGLPEGNAQELGAAGIAFSSIRLLVASTQAINLIGKQGSIIKSIQEST 182
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
A++R+L + +P + D+ +V + G+ +AL ++ LR L D
Sbjct: 183 GASVRVLSENEVPFYVATDERIVDLQGEAMKVLEALEAIVGHLRKFLVD 231
>gi|356562072|ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 105/194 (54%), Gaps = 16/194 (8%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
D ++R+ G P V+R + P+ K+GSIIGR GE++K+ +TK++IR+
Sbjct: 31 DPAAAEKRWPG--------WPGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVL 82
Query: 80 ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA-EELRGDEDSDGGH 138
+ G+ +R+V + + E+ + +SPA +A+ +V RV E+ + +
Sbjct: 83 DGAVGTSDRIVLI-------SGKEEPEAPLSPAMNAVIRVFKRVSGFSEIDAENKASAVA 135
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+ +LLV S Q +IGK G ++++I+ TGA +R+L + +P A + +V++ GEA
Sbjct: 136 FCSVRLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEA 195
Query: 199 SVVKKALCQIASRL 212
V KAL + L
Sbjct: 196 MKVLKALEAVVGHL 209
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 91/168 (54%), Gaps = 5/168 (2%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I + +E+ A I+V + D ++ +S KE E LS
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEEPEAPLSP 107
Query: 346 TIEAVVRLQPRCSEKIERD-----SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
+ AV+R+ R S E D S + + RLLV +++ LIGK GS+I ++ T
Sbjct: 108 AMNAVIRVFKRVSGFSEIDAENKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTG 167
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
A++R+L + +P A+ D+ +V++ G+ AL V+ LR L D
Sbjct: 168 ASVRVLSGDEVPFYAAADERIVELQGEAMKVLKALEAVVGHLRKFLVD 215
>gi|242040159|ref|XP_002467474.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
gi|241921328|gb|EER94472.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
Length = 452
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 101/180 (56%), Gaps = 16/180 (8%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L +TK+++RI E G+ ER+V V
Sbjct: 47 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLV------- 99
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI-----AEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ ED + PA DAL +V RVI A E G + + A+LLVP Q +
Sbjct: 100 SGKEDPGLELPPAMDALMRVFKRVIGITDGAAE--GTQAAATPGVCAARLLVPGAQAINL 157
Query: 155 IGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
IGK G ++ I+ TGA IR++ DE + DE +++I G+ V KAL +++ L
Sbjct: 158 IGKQGATIKAIQESTGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHL 217
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 85/172 (49%), Gaps = 9/172 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ +E+ A +++ + ++ VS KE L
Sbjct: 52 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPGLELPP 111
Query: 346 TIEAVVRLQPR-------CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R +E + + RLLVP ++ LIGK G+ I ++
Sbjct: 112 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQES 171
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A IR++ + P ++D+ +++I GD + AL V LR L D
Sbjct: 172 TGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKALQAVSNHLRKFLVD 223
>gi|326511144|dbj|BAJ87586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 106/195 (54%), Gaps = 20/195 (10%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P +R+ G P D V+R + P+ K+GSIIGR GE++K+L +TK+++R+ E
Sbjct: 39 PEAKRWPG--------WPGDNVFRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGP 90
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV--IAE-ELRGDEDSDGGHQ 139
G+ ER+V V +A ED + PA DAL +V RV I++ G + S
Sbjct: 91 VGATERIVLV-------SAKEDPGLELPPAMDALIRVFKRVNGISDGAAEGTQTSAAPGV 143
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGE 197
A+L+VP Q +IGK G ++ I+ TGA IR++ DE + DE +V+I GE
Sbjct: 144 CAARLVVPGAQAINLIGKQGASIKAIQEGTGATIRVISVDERDRPFYVTDDERIVEIQGE 203
Query: 198 ASVVKKALCQIASRL 212
V KAL +++ L
Sbjct: 204 TEKVLKALQAVSNHL 218
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 87/172 (50%), Gaps = 9/172 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R+V PV +G +IG+ G +I ++ +E+ A ++V + ++ VS+KE L
Sbjct: 53 FRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVSAKEDPGLELPP 112
Query: 346 TIEAVVRLQPR-------CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ R +E + + RL+VP ++ LIGK G+ I ++
Sbjct: 113 AMDALIRVFKRVNGISDGAAEGTQTSAAPGVCAARLVVPGAQAINLIGKQGASIKAIQEG 172
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A IR++ + + P ++D+ +V+I G+ + AL V LR L D
Sbjct: 173 TGATIRVISVDERDRPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLVD 224
>gi|224115590|ref|XP_002332094.1| predicted protein [Populus trichocarpa]
gi|222874914|gb|EEF12045.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 25/192 (13%)
Query: 34 DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVY 93
D++ P D V+R + P+ K+GSIIGR GE+VK++ +T+++IRI E G +R+V +
Sbjct: 44 DKWPGWPGDNVFRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLI- 102
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------------V 140
+ E+ + +SPA DA+ +V RV G +G +
Sbjct: 103 ------SGKEEPEAPLSPAMDAVLRVFKRV-----SGLSPGEGDNTGSAAAAAAAGSAFC 151
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
+ +LLV S Q +IGK G I+++I+ TG +R++ ++ +P+ A + +V+I GEA
Sbjct: 152 SIRLLVASSQAINLIGKQGSIIKSIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMK 211
Query: 201 VKKALCQIASRL 212
V KAL + L
Sbjct: 212 VFKALEAVIGHL 223
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 12/176 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV+ +G +IG+ G ++ ++ E+ A I++ D ++ +S KE E LS
Sbjct: 55 FRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISGKEEPEAPLSP 114
Query: 346 TIEAVVRLQPRCS-----------EKIERDSGLISF-TTRLLVPTSRIGCLIGKGGSIIT 393
++AV+R+ R S + +F + RLLV +S+ LIGK GSII
Sbjct: 115 AMDAVLRVFKRVSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIK 174
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
++ T +R++ ++++P A+ D+ +V+I G+ AL V+ LR L D
Sbjct: 175 SIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAMKVFKALEAVIGHLRKFLVDH 230
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 160/353 (45%), Gaps = 61/353 (17%)
Query: 39 GPEDTV-YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
GP T+ R + +++GSIIG+GGE +K+ R + ++I I ++ ER+VTV +++
Sbjct: 14 GPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDS--SCAERIVTVTGSTE 71
Query: 98 E-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
NAFE + K + ++ + S VT +L+VP+ Q G +IG
Sbjct: 72 AINNAFE-----------MITKKFEEDVSNNMA--NSSTPKPPVTLRLVVPASQCGSLIG 118
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ IR TGA +++ D S ++ V ISG + K + QI + ++P
Sbjct: 119 KGGSKIKEIRENTGASVQVAGDMLHQS----TERAVTISGTPEAITKCVYQICCVMLESP 174
Query: 217 S-------RSQHLLASAISNSHSSSGSLVGP------------------TAATPIVGIAP 251
R + A+A +++ G+ P TP A
Sbjct: 175 PKGATIPYRPKPTNATATHPAYAVHGNYAVPYPDFMKLHHLTMQHTPFLPGQTPFTPTAL 234
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
MG YG +AG + + + + ++ P IG VIG+GGA IN+IRQ
Sbjct: 235 NMG-YGVANAASAGTQVAT----------TGQQTYEIMIPNDLIGCVIGRGGAKINEIRQ 283
Query: 312 ESGAAIKVDSSSTEGDDCLITVS----SKEFFEDTLSATIEAVVRLQPRCSEK 360
SGA IK+ +S +D +T+S + +++++E L P + K
Sbjct: 284 ISGATIKIANSQEGSNDRSVTISGTVEAINLAHFLINSSLELAKNLAPELAAK 336
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 69/140 (49%), Gaps = 25/140 (17%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSS----------STE 325
+D + ++RL+ +G +IGKGG I + R++SGA I + DSS STE
Sbjct: 12 NDGPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDSSCAERIVTVTGSTE 71
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
+ + +K+F ED + + P T RL+VP S+ G LI
Sbjct: 72 AINNAFEMITKKFEEDVSNNMANSSTPKPP--------------VTLRLVVPASQCGSLI 117
Query: 386 GKGGSIITEMRRLTKANIRI 405
GKGGS I E+R T A++++
Sbjct: 118 GKGGSKIKEIRENTGASVQV 137
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T +++P IGC+IG+GG+ I E+R+++ A I+I + +D V ISG ++
Sbjct: 257 TYEIMIPNDLIGCVIGRGGAKINEIRQISGATIKIANSQE-----GSNDRSVTISGTVEA 311
Query: 431 AKDA--LIQVMTRLRANLFDREGAVSTFVP 458
A LI L NL A + +P
Sbjct: 312 INLAHFLINSSLELAKNLAPELAAKANLIP 341
>gi|226528431|ref|NP_001149906.1| nucleic acid binding protein [Zea mays]
gi|195635381|gb|ACG37159.1| nucleic acid binding protein [Zea mays]
Length = 448
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 99/178 (55%), Gaps = 12/178 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L +TK+++RI E G+ ER+V V
Sbjct: 43 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLV------- 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQV-TAKLLVPSDQIGCVIG 156
+ ED D + PA DAL +V V I + + V A+LLVP Q +IG
Sbjct: 96 SGKEDPDLELPPAMDALMRVFKXVTGITDGAAEXTQAAATPDVCAARLLVPGAQAINLIG 155
Query: 157 KGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
K G ++ I+ T A IR++ DEH + DE +V+I G+ V KAL +++ L
Sbjct: 156 KQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHL 213
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 9/172 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV PV +G +IG+ G +I ++ +E+ A +++ + ++ VS KE + L
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELPP 107
Query: 346 TIEAVVRLQPRCSEKIERDSGLISF-------TTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A++R+ + + + RLLVP ++ LIGK G+ I ++
Sbjct: 108 AMDALMRVFKXVTGITDGAAEXTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQES 167
Query: 399 TKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A IR++ + P ++D+ +V+I GD + AL V LR L D
Sbjct: 168 TSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKALQAVSNHLRKFLVD 219
>gi|361066699|gb|AEW07661.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 92.8 bits (229), Expect = 4e-16, Method: Composition-based stats.
Identities = 55/123 (44%), Positives = 79/123 (64%), Gaps = 6/123 (4%)
Query: 103 EDGDKF--VSPAQDALFKVHDRVIAEELRGDEDSDGGH---QVTAKLLVPSDQIGCVIGK 157
+DGD+ + PAQDAL +VH VIA+E + Q A+LLV + QIG +IGK
Sbjct: 8 DDGDENEPICPAQDALLRVHS-VIAQESSAKDKDSDADKKGQQNARLLVANSQIGSLIGK 66
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG +Q +R+E+GAQI+I + + LP CA DELV ISG+A+ VKKAL +++ L+ +
Sbjct: 67 GGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDATAVKKALYAVSAFLYKHLP 126
Query: 218 RSQ 220
+ Q
Sbjct: 127 KEQ 129
Score = 57.8 bits (138), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 48/86 (55%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
RLLV S+IG LIGKGG+ I +MR + A I+I K+ LP A DE+V ISGD K
Sbjct: 52 RLLVANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDATAVK 111
Query: 433 DALIQVMTRLRANLFDREGAVSTFVP 458
AL V L +L + S +P
Sbjct: 112 KALYAVSAFLYKHLPKEQIPWSLILP 137
>gi|384490263|gb|EIE81485.1| hypothetical protein RO3G_06190 [Rhizopus delemar RA 99-880]
Length = 426
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 152/338 (44%), Gaps = 69/338 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L ++ G IIG+GG+ V ++R + +++ I + VPG+ ER++TV
Sbjct: 82 RSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGAAERILTVVGP---------- 131
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVIGKGGQIVQ 163
VS A V +++I E ED+ G Q VT K+L+ ++++G +IGK G +++
Sbjct: 132 ---VSAVAKAYALVAEKIIEENTLA-EDNKGPIQQDVTIKILILANRMGSIIGKSGSVIR 187
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR----- 218
+I+ +GA++ ++E LP L ++ +V I G +++A+ +I L D P+
Sbjct: 188 SIQETSGAKVS-AQEEPLP---LSTERVVTIHGTPDAIEQAVKKIGDILVDQPNHHGNYM 243
Query: 219 --------SQHLLASAISNSHSS--------------------------SGSLVGPTAAT 244
+ H +S N H + SG L P
Sbjct: 244 LYKPIAGAAPHTSSSNHGNGHRNYRRSNDNNNAASHAMPTAAAAAMMGYSGML--PMGNM 301
Query: 245 PIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD--------DLSSKEFSLRLVCPVANIG 296
+ G Y G G GD+ + + ++ S ++ P +G
Sbjct: 302 SMNGFYYPPTNYPGGSGGRQGDYPLPMMPGLSNLSMMGGLSNMMPATQSQQIYIPNEMVG 361
Query: 297 GVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+IGKGG IN+IRQ SG+ IK+ ST+ + LIT++
Sbjct: 362 CIIGKGGMKINEIRQTSGSHIKIADPSTDSHERLITIT 399
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 33/224 (14%)
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
++R++ A + + + SLR + + + G +IGKGG +++IR S A + +
Sbjct: 62 YTRTVTVASEEGMIAGNISLRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGA 121
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI-------ERDSGLIS--FTTRLLVP 377
+ ++TV + AV + +EKI E + G I T ++L+
Sbjct: 122 AERILTV----------VGPVSAVAKAYALVAEKIIEENTLAEDNKGPIQQDVTIKILIL 171
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
+R+G +IGK GS+I ++ + A + +E LP +++E +V I G DA+ Q
Sbjct: 172 ANRMGSIIGKSGSVIRSIQETSGAKVSAQ-EEPLP-LSTE--RVVTIHG----TPDAIEQ 223
Query: 438 VMTRLRANLFDR---EGAVSTFVPV---LPYIPVSENGSDGLNY 475
+ ++ L D+ G + P+ P+ S +G+ NY
Sbjct: 224 AVKKIGDILVDQPNHHGNYMLYKPIAGAAPHTSSSNHGNGHRNY 267
>gi|307136423|gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 331
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 98/176 (55%), Gaps = 10/176 (5%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D ++R + P ++IG +IG+ G ++++R +TK+ I+I + V EERV+ + S+ D N+
Sbjct: 68 DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVI-IISSKDNENS 126
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGCVIGKGG 159
D +K + + K D EEL+ GH T +LL+ Q G +IG G
Sbjct: 127 VTDAEKALQQIAALILK-EDGSSIEELK----VGTGHVAANTIRLLIAGSQAGSLIGASG 181
Query: 160 QIVQNIRSETGAQIRILKDEHLPSC--ALRSDELVQISGEASVVKKALCQIASRLH 213
Q ++ +R+ +GA I IL LP C A SD +VQISG+ V KAL +I ++L
Sbjct: 182 QNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR 237
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 94/180 (52%), Gaps = 9/180 (5%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
SAP+ + + R+V P IG VIGK G I ++R+E+ A IK+ + ++ +I
Sbjct: 58 SAPKRQAKAHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVII 117
Query: 333 VSSKEF------FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT-RLLVPTSRIGCLI 385
+SSK+ E L +++ E+++ +G ++ T RLL+ S+ G LI
Sbjct: 118 ISSKDNENSVTDAEKALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLI 177
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIAS--EDDEMVQISGDLDLAKDALIQVMTRLR 443
G G I ++R + A+I IL LP AS E D +VQISGD+ AL ++ +LR
Sbjct: 178 GASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKALEEIGNQLR 237
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS- 195
H V +++VPS QIG VIGK G +Q +R ET A I+I + A + ++ IS
Sbjct: 66 AHDVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIAD-----AVARYEERVIIISS 120
Query: 196 --GEASVV--KKALCQIAS 210
E SV +KAL QIA+
Sbjct: 121 KDNENSVTDAEKALQQIAA 139
>gi|449524744|ref|XP_004169381.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 224
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 94/161 (58%), Gaps = 11/161 (6%)
Query: 16 TDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSK 75
+D A H P+ +TG ++ P D V+R + P+ K+GSIIGR G+++K++ +T+++
Sbjct: 56 SDSAAHEPSN--HTGPSDKKWPGWPGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRAR 113
Query: 76 IRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
IR+ + G+ +RVV + + E+ + +SPA DA+ +V RV L +ED
Sbjct: 114 IRVLDGAVGTPDRVVLI-------SGKEELESPLSPAMDAVIRVFKRV--SGLSENEDEA 164
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
+ +LLV S Q +IGK G ++++I+ TGA +R+L
Sbjct: 165 KASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVL 205
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 72/123 (58%), Gaps = 2/123 (1%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I ++ +E+ A I+V + D ++ +S KE E LS
Sbjct: 83 FRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSP 142
Query: 346 TIEAVVRLQPRCSEKIE-RDSGLISFTT-RLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
++AV+R+ R S E D SF + RLLV +++ LIGK GS+I ++ T A++
Sbjct: 143 AMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 202
Query: 404 RIL 406
R+L
Sbjct: 203 RVL 205
>gi|257831439|gb|ACV71020.1| UPA21 [Capsicum annuum]
Length = 433
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 97/176 (55%), Gaps = 10/176 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D VYR + P+ K+GSIIGR GE+VK++ T ++IR+ E G+ +R+V +
Sbjct: 51 PGDNVYRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLI------- 103
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGD--EDSDGGHQVTAKLLVPSDQIGCVIGK 157
+ ED D VSPA DA+F+V RV E GD + G + KLL+ S Q +IG+
Sbjct: 104 SGREDPDAQVSPAMDAVFRVFKRVAGLE-GGDPGAAAAGFAFCSFKLLMASSQAVHLIGR 162
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
G ++ I+ +GA +R+L ++ + A + +V+I GE V A + +L
Sbjct: 163 HGSTIKEIQERSGASLRVLSEDDVVPYATADERIVEIRGEGLKVLDAFEAVVRQLR 218
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 93/167 (55%), Gaps = 5/167 (2%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSAT 346
RLV P+ +G +IG+ G ++ ++ +++GA I+V D ++ +S +E + +S
Sbjct: 57 RLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISGREDPDAQVSPA 116
Query: 347 IEAVVRLQPRCS-----EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
++AV R+ R + + +G + +LL+ +S+ LIG+ GS I E++ + A
Sbjct: 117 MDAVFRVFKRVAGLEGGDPGAAAAGFAFCSFKLLMASSQAVHLIGRHGSTIKEIQERSGA 176
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
++R+L ++++ A+ D+ +V+I G+ DA V+ +LR L D
Sbjct: 177 SLRVLSEDDVVPYATADERIVEIRGEGLKVLDAFEAVVRQLRKFLVD 223
>gi|357479529|ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355511105|gb|AES92247.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 431
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 103/196 (52%), Gaps = 17/196 (8%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
D +++R+ G P V+R + P+ K+G IIGR GE++K+ +T ++IR+
Sbjct: 29 DESESEKRWPG--------WPGHCVFRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVL 80
Query: 80 ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGG 137
+ G+ +R+V + + ED + +SPA DA+ ++ RV ++E + + G
Sbjct: 81 DAPVGTPDRIVLI-------SGKEDLEAPLSPAMDAILRIFKRVSGLSETDNNNTAAAGV 133
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE 197
+ +LLV S Q +IGK G ++ I+ TGA IR+L + LPS A + ++ + GE
Sbjct: 134 ALCSIRLLVASTQAINLIGKQGSSIKAIQENTGAVIRVLSGDELPSYAGADERIIDLQGE 193
Query: 198 ASVVKKALCQIASRLH 213
V KAL + L
Sbjct: 194 TLKVLKALEAVVGHLR 209
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 94/181 (51%), Gaps = 11/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +G +IG+ G +I + +E+ A I+V + D ++ +S KE E LS
Sbjct: 46 FRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVGTPDRIVLISGKEDLEAPLSP 105
Query: 346 TIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++A++R+ R S E D +G+ + RLLV +++ LIGK GS I ++ T
Sbjct: 106 AMDAILRIFKRVSGLSETDNNNTAAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQENT 165
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPV 459
A IR+L + LP A D+ ++ + G+ AL V+ LR L D S+ +P+
Sbjct: 166 GAVIRVLSGDELPSYAGADERIIDLQGETLKVLKALEAVVGHLRKFLVD-----SSVIPL 220
Query: 460 L 460
Sbjct: 221 F 221
>gi|357140452|ref|XP_003571781.1| PREDICTED: uncharacterized protein LOC100836040 [Brachypodium
distachyon]
Length = 587
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/173 (34%), Positives = 98/173 (56%), Gaps = 11/173 (6%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P TV+R L K+G+IIG+ GE V++L +TK+ +R+ + ERVV ++
Sbjct: 59 PGTTVFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIF------ 112
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A E D+ + PA DAL +V+ ++ ++ G SD V ++L+PS+Q +IG+ G
Sbjct: 113 -AKEQPDEPIPPAMDALLRVYQNIVNDDGLG-MGSDSA--VVTRILIPSEQALNLIGEQG 168
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
++ I + IR+L D +LP AL D +V+I G+ + V+KAL +A L
Sbjct: 169 SMINLIEEASQTDIRVL-DCNLPPAALDEDRIVEIWGQPTRVRKALELVARHL 220
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 101/192 (52%), Gaps = 16/192 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ +G +IG+ G + ++ +E+ A+++V + ++ + +KE ++ +
Sbjct: 64 FRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIFAKEQPDEPIPP 123
Query: 346 TIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
++A++R+ + I D GL + TR+L+P+ + LIG+ GS+I + ++
Sbjct: 124 AMDALLRVY----QNIVNDDGLGMGSDSAVVTRILIPSEQALNLIGEQGSMINLIEEASQ 179
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVL 460
+IR+L NLP A ++D +V+I G + AL V LR L DR + +P+
Sbjct: 180 TDIRVL-DCNLPPAALDEDRIVEIWGQPTRVRKALELVARHLRKYLVDR-----SVIPLF 233
Query: 461 -PYIPVSENGSD 471
P++P++ + D
Sbjct: 234 DPHVPMTTSHVD 245
>gi|357449597|ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355484123|gb|AES65326.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 470
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 106/193 (54%), Gaps = 17/193 (8%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P ++R+ G P D V+R + P+ K+G IIGR G+++K+L +TK+++R+ +
Sbjct: 58 PPEQRWPG--------WPGDCVFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDAD 109
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQV 140
G +R++ + + E+ + +SPA DA+ ++ RV ++E ++ G
Sbjct: 110 LGIPDRIILI-------SGKEELEAAISPAMDAVIRIFKRVSGLSETDSENKGPAGVTLC 162
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
+ +LLV S Q +IGK G I+++I+ +GA +R+L + + A + +V + GEA +
Sbjct: 163 SIRLLVASTQAISLIGKQGTIIRSIQESSGASVRVLSGDEVQYFATAEERIVDLQGEALM 222
Query: 201 VKKALCQIASRLH 213
V KAL + L
Sbjct: 223 VLKALEAVIGHLR 235
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 93/169 (55%), Gaps = 6/169 (3%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RL+ PV +GG+IG+ G +I ++ E+ A ++V + D +I +S KE E +S
Sbjct: 72 FRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILISGKEELEAAISP 131
Query: 346 TIEAVVRLQPRCSEKIERDS------GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
++AV+R+ R S E DS G+ + RLLV +++ LIGK G+II ++ +
Sbjct: 132 AMDAVIRIFKRVSGLSETDSENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSIQESS 191
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
A++R+L + + A+ ++ +V + G+ + AL V+ LR L D
Sbjct: 192 GASVRVLSGDEVQYFATAEERIVDLQGEALMVLKALEAVIGHLRKFLVD 240
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 187/409 (45%), Gaps = 64/409 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 257
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A A + + + A E + ED + K+L + +G +IGK G+
Sbjct: 258 A----------ACRMILDIMQKE-ANETKTTED------IPLKILAHNSLVGRLIGKEGR 300
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPS 217
++ I +TG +I I + L + + + G KA +I +L ++N
Sbjct: 301 NLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYENDI 358
Query: 218 RSQHLLASAISNSH------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+ + A+ I + SSG V P AA P + P + P G ++ L
Sbjct: 359 AAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAV-PAVAPAG---------YNPFL 408
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
AP ++ + L P +G +IGK G I Q+ +GA+IK+ + E D
Sbjct: 409 QQAPEQEV------VYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI--APAESPD--- 457
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIG 386
V+ + ++ T EA + Q R K++ ++ + T + VP+S G +IG
Sbjct: 458 -VTERMVI---ITGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIG 513
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
KGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 514 KGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 558
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASD 97
PE V P + +G++IG+ G+ +KQL + I+I P ER+V + + +
Sbjct: 411 APEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVII-TGTP 469
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E G F ++ F + V ++ + VPS G VIGK
Sbjct: 470 EAQFKAQGRIFGKLKEENFFSAKEEV---------------KLETHIKVPSSAAGRVIGK 514
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASRLHDNP 216
GG+ V +++ T A++ + +D+ +DE V+ISG + A +I +
Sbjct: 515 GGKTVNELQNLTSAEVIVPRDQ----TPDENDEVFVKISGHFFASQTAQRKIREIIQQVK 570
Query: 217 SRSQ-HLLASAISNSHS 232
+ Q H +A+S HS
Sbjct: 571 QQEQKHQQGAAVSPHHS 587
>gi|432934409|ref|XP_004081928.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Oryzias latipes]
Length = 600
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 108/418 (25%), Positives = 189/418 (45%), Gaps = 57/418 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDET 99
+D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S +
Sbjct: 186 QDFPLRILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGC 245
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++ A + + + A E + +E+ + K+L + +G +IGK G
Sbjct: 246 SS----------ACRMILDIMQKE-ANETKTNEE------IPLKILAHNSLVGRLIGKEG 288
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L C + + + G KA +I +L ++N
Sbjct: 289 RNLKKIEEETGTKITISSLQDLTIC--NPERTITVKGSLEACCKAEVEIMKKLKEAYEND 346
Query: 217 SRSQHLLASAISNSH------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRS 270
+ + A+ I + SSG V P AA G P M P G +
Sbjct: 347 IAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGS-RGAVPPMPPAGYNPFLSHSSHLSG 405
Query: 271 LYSAPRDDLSSKEFS--------LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
LY P + S + L P +G +IGK G I Q+ +GA+IK+ +
Sbjct: 406 LYGVPPTSAIPHQHSQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI--A 463
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVP 377
E D V+ + ++ T EA + Q R K++ ++ + T + VP
Sbjct: 464 PAESPD----VTERMVI---ITGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKVP 516
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
+S G +IGKGG + E++ LT A + I+P++ +P E+DE+ V+ISG ++ A
Sbjct: 517 SSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQIP---DENDEVFVKISGHFFASQTA 570
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 22/160 (13%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASD 97
PE V P + +G++IG+ G+ +KQL + I+I P ER+V + + +
Sbjct: 423 APEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVII-TGTP 481
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E G F ++ F + V ++ + VPS G VIGK
Sbjct: 482 EAQFKAQGRIFGKLKEENFFSAKEEV---------------KLETHIKVPSSAAGRVIGK 526
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISG 196
GG+ V +++ T A++ + +D+ +P +DE V+ISG
Sbjct: 527 GGKTVNELQNLTSAEVIVPRDQ-IPD---ENDEVFVKISG 562
>gi|338723967|ref|XP_001497902.3| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Equus caballus]
Length = 638
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 194/418 (46%), Gaps = 58/418 (13%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 251 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 310
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 311 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 353
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + I G KA +I ++ ++N
Sbjct: 354 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITIKGNVETCAKAEEEIMKKIRESYEN 411
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 412 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 456
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S+ ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 457 QFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 513
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 514 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 567
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P D +V+I+G +A+ + +++T+++ +
Sbjct: 568 TVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 622
>gi|348564372|ref|XP_003467979.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cavia porcellus]
Length = 741
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 194/416 (46%), Gaps = 60/416 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 356 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 415
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 416 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 458
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 459 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 516
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P P GP ++ P
Sbjct: 517 DIASMNLQAHLIPGLNLNALGLFPPTSGMP----PPTSGP------------PSAMPPYP 560
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 561 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 616
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 617 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 670
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P D +V+I+G +A+ + +++T+++
Sbjct: 671 TVNELQNLSSAEV-VVPRDQTPD--ENDQVVVKITGHFYACQVAQRKIQEILTQVK 723
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 97/313 (30%), Positives = 150/313 (47%), Gaps = 53/313 (16%)
Query: 40 PEDT------VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTV 92
PEDT R L ++IGSIIG+ GE VK++R + ++I I E GS ER+ T+
Sbjct: 14 PEDTELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI 70
Query: 93 YSASDETNAFEDGDKFVSPAQDALFKVHDRV---IAEELRGDED--SDGGHQVTAKLLVP 147
++D A+F+ + + E+L D + G VT +L++P
Sbjct: 71 TGSTD-----------------AVFRAVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVIP 113
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQ 207
+ Q G +IGK G ++ IR TGAQ+++ D LP+ R+ V +SG + + Q
Sbjct: 114 ASQCGSLIGKAGAKIREIRESTGAQVQVAGDL-LPNSTERA---VTVSGVPDTIIHCVRQ 169
Query: 208 IASRLHDNPSRSQHLLASAISNSH-----SSSGSLVGPTAAT------PIVG--IAPLMG 254
I + + + P+ S A + H + SL+ + T P VG P+M
Sbjct: 170 ICAVILEVPTESPTQAWGAFPHQHGYLPPKMTLSLISWSPCTHQSPPNPAVGKHWHPIMT 229
Query: 255 -PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
Y ++ T S SL P D SS+ S + P IG +IG+ G+ I++IRQ S
Sbjct: 230 DAYSYWRPTTPLLTSLSL--PPGLDTSSQNSSQEFLVPNDLIGCIIGRHGSKISEIRQMS 287
Query: 314 GAAIKVDSSSTEG 326
GA IK+ + TEG
Sbjct: 288 GAHIKI-GNQTEG 299
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 29/192 (15%)
Query: 266 DWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
D + S+ +P D S +LR++ IG +IGK G + +IR++S A I + S
Sbjct: 5 DGASSVSGSPEDTELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS-- 62
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS---------FTTRLLV 376
C ++ T++ + +AV R + K+E D G S T RL++
Sbjct: 63 ---CPERIT-------TITGSTDAVFRAVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVI 112
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALI 436
P S+ G LIGK G+ I E+R T A +++ + LP + + V +SG D +I
Sbjct: 113 PASQCGSLIGKAGAKIREIRESTGAQVQVA-GDLLP---NSTERAVTVSG----VPDTII 164
Query: 437 QVMTRLRANLFD 448
+ ++ A + +
Sbjct: 165 HCVRQICAVILE 176
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEER 88
G D +G R + P + GS+IG+ G ++++R T +++++ G+ +P S ER
Sbjct: 93 GAGSDGAAVGRSPVTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTER 152
Query: 89 VVTVYSASD 97
VTV D
Sbjct: 153 AVTVSGVPD 161
>gi|194222666|ref|XP_001498933.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Equus caballus]
Length = 620
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 189/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 214 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 273
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 274 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 315
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 316 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFEND 373
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A V AP P+ + G + +
Sbjct: 374 MLAVNQQANLIPGLNLSALGIFSTGLSMLPPPAGPRGVPPAPPYHPFATHSGYFSSLYPP 433
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+S P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 434 HQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 491
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 492 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 544
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 545 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 592
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 446 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 504
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 505 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 549
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 550 GKTVNELQNLTSAEVIVPRDQ 570
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 183/397 (46%), Gaps = 47/397 (11%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQL------RIDTKSKIRIGETVPGSEERVVTVYSA 95
D R L +G+IIGR G ++Q+ R+D K +G S E+ +T+Y
Sbjct: 142 DFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVG-----SLEKAITIYGN 196
Query: 96 SDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
D TNA + + + + K +D + G +S +++T K+L ++ IG +
Sbjct: 197 PDNCTNACKKILEVMQQEANNTNKGYDEGSNSDDHGAVNS---YEITLKILAHNNLIGRI 253
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-- 212
IGKGG ++ I +T +I + + S L + ++ + G + KA I+S+L
Sbjct: 254 IGKGGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGTIENMSKAESMISSKLRQ 311
Query: 213 -HDNPSRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDW 267
++N ++ Q ++ + S + +G ++ P + G P PY G
Sbjct: 312 SYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLQTQQG-- 369
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
P D F L P ++G +IG G+ I I + SGA++K+ + E D
Sbjct: 370 ------VPASDTQETTF---LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLEQD 418
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRI 381
+ ++ T+ + E+ + Q EK+ R+ G +S T +LVP++++
Sbjct: 419 KPAEQQTERKV---TIVGSPESQWKAQYLIFEKM-REEGYVSGTEDVRLTIEILVPSAQV 474
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
G +IGKGG + E++R+T + I++ ++ P A E+
Sbjct: 475 GRIIGKGGQNVRELQRVTGSVIKLSEQQATPPSADEE 511
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 98/222 (44%), Gaps = 20/222 (9%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFED 341
+F LR++ +G +IG+ G+ I QI Q S A + V G + IT+ D
Sbjct: 142 DFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITIYGNP---D 198
Query: 342 TLSATIEAVVRLQPRCSEKIER---------DSGLIS---FTTRLLVPTSRIGCLIGKGG 389
+ + ++ + + + + D G ++ T ++L + IG +IGKGG
Sbjct: 199 NCTNACKKILEVMQQEANNTNKGYDEGSNSDDHGAVNSYEITLKILAHNNLIGRIIGKGG 258
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+ I + + T I + ++ E ++ + G ++ A + ++LR + +
Sbjct: 259 NTIKRIMQDTDTKITVSSINDINSFNLE--RIITVKGTIENMSKAESMISSKLRQSYEND 316
Query: 450 EGAVSTFVPVLPYI-PVSENGSDGLNYESRDSKRHGRGP-PY 489
A++ + P + P++ + G+ Y SR +G GP PY
Sbjct: 317 LQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPY 358
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE--ERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + P + ER VT+ +
Sbjct: 376 QETTFLYI-PNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGS 434
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E + G ED ++T ++LVPS Q+G +
Sbjct: 435 PES-------------QWKAQYLIFEKMREEGYVSGTEDV----RLTIEILVPSAQVGRI 477
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
IGKGGQ V+ ++ TG+ I++ + + P A
Sbjct: 478 IGKGGQNVRELQRVTGSVIKLSEQQATPPSA 508
>gi|357147442|ref|XP_003574345.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 1-like
[Brachypodium distachyon]
Length = 447
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 100/180 (55%), Gaps = 15/180 (8%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D+V+R + P+ K+GSIIGR GE++K+L +TK+++R+ + G+ ERVV V
Sbjct: 44 PGDSVFRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLV------- 96
Query: 100 NAFEDGDKFVSPAQDALFKVHDRV-----IAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ E+ + PA DAL +V RV +A + + G A+LLVP Q +
Sbjct: 97 SGKEEPGLDLPPAMDALIRVFKRVNGITDVAADSTTQTAAPPG-VCAARLLVPGAQAINL 155
Query: 155 IGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDE-LVQISGEASVVKKALCQIASRL 212
IGK G ++ I+ TGA IR++ DE + DE +V+I GE V KAL +++ L
Sbjct: 156 IGKQGASIKAIQEGTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHL 215
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 86/173 (49%), Gaps = 10/173 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R+V PV +G +IG+ G +I ++ +E+ A ++V + ++ VS KE L
Sbjct: 49 FRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVSGKEEPGLDLPP 108
Query: 346 TIEAVVRLQPRCS--EKIERDSGLISF------TTRLLVPTSRIGCLIGKGGSIITEMRR 397
++A++R+ R + + DS + RLLVP ++ LIGK G+ I ++
Sbjct: 109 AMDALIRVFKRVNGITDVAADSTTQTAAPPGVCAARLLVPGAQAINLIGKQGASIKAIQE 168
Query: 398 LTKANIRILP--KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A IR++ + P ++D+ +V+I G+ + AL V LR L D
Sbjct: 169 GTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKALQAVSNHLRKFLVD 221
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 106/417 (25%), Positives = 187/417 (44%), Gaps = 57/417 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 257
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A A + + + A E + ED + K+L + +G +IGK G+
Sbjct: 258 A----------ACRMILDIMQKE-ANETKTTED------IPLKILAHNSLVGRLIGKEGR 300
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPS 217
++ I +TG +I I + L + + + G KA +I +L ++N
Sbjct: 301 NLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYENDI 358
Query: 218 RSQHLLASAISNSH------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+ + A+ I + SSG V P AA P + P + P G + L
Sbjct: 359 AAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAV-PAVAPAGYNPFLSHSSHLSGL 417
Query: 272 YSAP--------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
Y P + ++ + L P +G +IGK G I Q+ +GA+IK+ +
Sbjct: 418 YGVPPASAIPHQHSQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI--AP 475
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
E D V+ + ++ T EA + Q R K++ ++ + T + VP+
Sbjct: 476 AESPD----VTERMVI---ITGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKVPS 528
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 529 SAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 581
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASD 97
PE V P + +G++IG+ G+ +KQL + I+I P ER+V + + +
Sbjct: 434 APEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVII-TGTP 492
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E G F ++ F + V ++ + VPS G VIGK
Sbjct: 493 EAQFKAQGRIFGKLKEENFFSAKEEV---------------KLETHIKVPSSAAGRVIGK 537
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASRLHDNP 216
GG+ V +++ T A++ + +D+ +DE V+ISG + A +I +
Sbjct: 538 GGKTVNELQNLTSAEVIVPRDQ----TPDENDEVFVKISGHFFASQTAQRKIREIIQQVK 593
Query: 217 SRSQ-HLLASAISNSHS 232
+ Q H +A+S HS
Sbjct: 594 QQEQKHQQGAAVSPHHS 610
>gi|300796214|ref|NP_001179217.1| insulin-like growth factor 2 mRNA-binding protein 3 [Bos taurus]
gi|296488613|tpg|DAA30726.1| TPA: insulin-like growth factor 2 mRNA binding protein 3 [Bos
taurus]
Length = 580
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 196/417 (47%), Gaps = 60/417 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAITPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S+ ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 456 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 509
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 510 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 562
>gi|426227471|ref|XP_004007841.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Ovis aries]
Length = 580
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/419 (22%), Positives = 197/419 (47%), Gaps = 60/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S+ ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 456 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 509
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 510 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 564
>gi|328720738|ref|XP_001949210.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 155/338 (45%), Gaps = 44/338 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
+ R L R++G++IG+GGE VK +R + +++ I + + ER+VT+ + TNA
Sbjct: 20 NLTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISDG--STPERIVTI---TGTTNA 74
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-VTAKLLVPSDQIGCVIGKGGQ 160
+ + + F+ R + D +G +T KL+VP+ Q G +IGKGG
Sbjct: 75 ICKATELIGLKVEEFFE----------RQNGDWNGPKAPLTFKLIVPASQCGFIIGKGGC 124
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ IR +GA I++ D LP+ ++ LV I+G + + + Q+ + L D+P RS
Sbjct: 125 KIKEIRESSGAAIQVASD-MLPNS---TERLVSITGTTGTISQCVYQVCNVLLDSPPRSA 180
Query: 221 HLLASAISNS----HSSSGSLVGPTAATPIVGIAPL---MGPYGGYK----GDTAGDWSR 269
+ S + S+ G+ G P+ +A L GG AG R
Sbjct: 181 TIPYDPRSKTSGFASSAVGNDFGRQRTNPLASLAALGLGTASTGGINPAALAALAGSQLR 240
Query: 270 SLYSAPRD--------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-- 319
+ R+ + +S ++ + P IG VIG+ G+ I +IRQ SGA + +
Sbjct: 241 TGNRQNRNGSGEHKNQNSNSNTETISMTVPNDLIGCVIGRRGSKIAEIRQISGALVHIAK 300
Query: 320 ---DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+ E +D IT++ + IE V LQ
Sbjct: 301 GEGTHENGENEDRHITITGNKDSISVAKYLIEMSVELQ 338
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D + ++R++ +G VIGKGG + IR +SGA + + ST + ++T++
Sbjct: 14 NDYNDVNLTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISDGSTP--ERIVTITG- 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS-----FTTRLLVPTSRIGCLIGKGGSI 391
T +A +A + + E ER +G + T +L+VP S+ G +IGKGG
Sbjct: 71 -----TTNAICKATELIGLKVEEFFERQNGDWNGPKAPLTFKLIVPASQCGFIIGKGGCK 125
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
I E+R + A I++ + LP + + +V I+G + QV L
Sbjct: 126 IKEIRESSGAAIQV-ASDMLP---NSTERLVSITGTTGTISQCVYQVCNVL 172
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 359 EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
E ++S + T + VP IGC+IG+ GS I E+R+++ A + I E + +
Sbjct: 252 EHKNQNSNSNTETISMTVPNDLIGCVIGRRGSKIAEIRQISGALVHIAKGEGTHENGENE 311
Query: 419 DEMVQISGDLDLAKDA--LIQVMTRL-RANLFDREGAVSTFV-------PVLPYIPVSE 467
D + I+G+ D A LI++ L +ANL EG V P+ IP+++
Sbjct: 312 DRHITITGNKDSISVAKYLIEMSVELQKANL---EGQTHPLVLTMVAASPLSSAIPLAQ 367
>gi|73976022|ref|XP_863341.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 7 [Canis lupus familiaris]
Length = 580
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 197/419 (47%), Gaps = 60/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + + + ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQAPQTETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 456 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 509
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 510 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 564
>gi|410952456|ref|XP_003982896.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Felis catus]
Length = 580
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/419 (22%), Positives = 197/419 (47%), Gaps = 60/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + + + ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQAPETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 456 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 509
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 510 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 564
>gi|403287927|ref|XP_003935171.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Saimiri boliviensis boliviensis]
Length = 579
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 198/423 (46%), Gaps = 61/423 (14%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYS 94
F P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S
Sbjct: 189 FKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILS 248
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ T+A A ++ ++ + A++++ E+ + K+L ++ +G +
Sbjct: 249 TPEGTSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRL 291
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-- 212
IGK G+ ++ I +T +I I + L + + + G KA +I ++
Sbjct: 292 IGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRE 349
Query: 213 -HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
++N S +L A I + ++ L PT+ P T+G S
Sbjct: 350 SYENDIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMT 394
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
P+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D +
Sbjct: 395 PPYPQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKV 451
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIG 386
+ ++ EA + Q R KI+ ++ + + + VP+ G +IG
Sbjct: 452 RMV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIG 504
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRL 442
KGG + E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T++
Sbjct: 505 KGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQV 560
Query: 443 RAN 445
+ +
Sbjct: 561 KQH 563
>gi|73976012|ref|XP_539474.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Canis lupus familiaris]
Length = 579
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|410952454|ref|XP_003982895.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Felis catus]
Length = 579
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|392339927|ref|XP_003753941.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|392347297|ref|XP_003749789.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|149033413|gb|EDL88214.1| insulin-like growth factor 2, binding protein 3 [Rattus norvegicus]
Length = 579
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|395830897|ref|XP_003788549.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Otolemur garnettii]
Length = 579
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 196/417 (47%), Gaps = 61/417 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 561
>gi|296209450|ref|XP_002751548.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Callithrix jacchus]
Length = 579
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 197/419 (47%), Gaps = 61/419 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|301771918|ref|XP_002921377.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ailuropoda melanoleuca]
Length = 579
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 196/417 (47%), Gaps = 61/417 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 561
>gi|301771920|ref|XP_002921378.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 2 [Ailuropoda melanoleuca]
Length = 582
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/417 (22%), Positives = 196/417 (47%), Gaps = 58/417 (13%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P P G + + ++
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP--------PPTSGPPSAMTPPYPHNSFTR- 404
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
SS+ ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 405 ----SSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 457
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 458 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 511
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 512 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 564
>gi|30795212|ref|NP_006538.2| insulin-like growth factor 2 mRNA-binding protein 3 [Homo sapiens]
gi|114612360|ref|XP_001157593.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 4 [Pan troglodytes]
gi|397472938|ref|XP_003807987.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3 [Pan
paniscus]
gi|254763311|sp|O00425.2|IF2B3_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=KH
domain-containing protein overexpressed in cancer;
Short=hKOC; AltName: Full=VICKZ family member 3
gi|4191612|gb|AAD09828.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|40807047|gb|AAH65269.1| Insulin-like growth factor 2 mRNA binding protein 3 [Homo sapiens]
gi|51095013|gb|EAL24257.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|119614193|gb|EAW93787.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Homo sapiens]
gi|261861412|dbj|BAI47228.1| insulin-like growth factor 2 mRNA binding protein 3 [synthetic
construct]
gi|410216456|gb|JAA05447.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410260770|gb|JAA18351.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410287810|gb|JAA22505.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410334615|gb|JAA36254.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
Length = 579
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 196/417 (47%), Gaps = 61/417 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 561
>gi|109067156|ref|XP_001098422.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 3 [Macaca mulatta]
gi|402863939|ref|XP_003896249.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Papio anubis]
Length = 579
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 196/417 (47%), Gaps = 61/417 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 561
>gi|119614192|gb|EAW93786.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_a
[Homo sapiens]
Length = 422
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 196/417 (47%), Gaps = 61/417 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 36 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 95
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 96 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 138
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 139 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 196
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 197 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 241
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 242 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 297
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 298 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 351
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 352 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 404
>gi|395738667|ref|XP_003780758.1| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2
mRNA-binding protein 3 [Pongo abelii]
Length = 567
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 196/417 (47%), Gaps = 61/417 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 181 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 240
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 241 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 283
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 284 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 341
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 342 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 386
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 387 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 442
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 443 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 496
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 497 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 549
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 106/409 (25%), Positives = 187/409 (45%), Gaps = 68/409 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 257
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A A + + + A E + ED + K+L + +G +IGK G+
Sbjct: 258 A----------ACRMILDIMQKE-ANETKTTED------IPLKILAHNSLVGRLIGKEGR 300
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPS 217
++ I +TG +I I + L + + + G KA +I +L ++N
Sbjct: 301 NLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYENDI 358
Query: 218 RSQHLLASAISNSH------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+ + A+ I + SSG V P AA P I P ++ + S+S
Sbjct: 359 AAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPPTRIPP-----------SSPEMSQS- 406
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
AP ++ + L P +G +IGK G I Q+ +GA+IK+ + E D
Sbjct: 407 --APEQEV------VYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI--APAESPD--- 453
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIG 386
V+ + ++ T EA + Q R K++ ++ + T + VP+S G +IG
Sbjct: 454 -VTERMVI---ITGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIG 509
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
KGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 510 KGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 554
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASD 97
PE V P + +G++IG+ G+ +KQL + I+I P ER+V + + +
Sbjct: 407 APEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMV-IITGTP 465
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E G F ++ F + V ++ + VPS G VIGK
Sbjct: 466 EAQFKAQGRIFGKLKEENFFSAKEEV---------------KLETHIKVPSSAAGRVIGK 510
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASRLHDNP 216
GG+ V +++ T A++ + +D+ +DE V+ISG + A +I +
Sbjct: 511 GGKTVNELQNLTSAEVIVPRDQ----TPDENDEVFVKISGHFFASQTAQRKIREIIQQVK 566
Query: 217 SRSQ-HLLASAISNSHS 232
+ Q H +A+S HS
Sbjct: 567 QQEQKHQQGAAVSPHHS 583
>gi|296089737|emb|CBI39556.3| unnamed protein product [Vitis vinifera]
Length = 526
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 59/85 (69%)
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
L+ K G + E+ +T NI IL KENL ++AS+DDEMVQI G+L++A + L+Q+ RL+
Sbjct: 94 LLIKMGPFVYEVMSVTGVNISILSKENLSQVASKDDEMVQIIGELNVASNTLVQMTLRLK 153
Query: 444 ANLFDREGAVSTFVPVLPYIPVSEN 468
ANLF REG + F L Y+P+ ++
Sbjct: 154 ANLFGREGVTTAFPSTLLYLPIVKH 178
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
++ K G V + S TG I IL E+L A + DE+VQI GE +V L Q+ RL
Sbjct: 94 LLIKMGPFVYEVMSVTGVNISILSKENLSQVASKDDEMVQIIGELNVASNTLVQMTLRLK 153
Query: 214 DN 215
N
Sbjct: 154 AN 155
>gi|255071283|ref|XP_002507723.1| predicted protein [Micromonas sp. RCC299]
gi|226522998|gb|ACO68981.1| predicted protein [Micromonas sp. RCC299]
Length = 287
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 132/282 (46%), Gaps = 46/282 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKI---RIGETVPGSEERVVTVYSASDE 98
+ ++L P GSIIG+GG V +L+ T S+I R E PG+++R+VTVY +
Sbjct: 2 NITLKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQLSRATEVFPGTKDRIVTVYGTA-- 59
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
P+ F + +I++ +R E GG KL++P+ GC+IG+G
Sbjct: 60 ------------PSILGAFHL---MISKLVRDGEGLVGGRP-HVKLVIPNASCGCIIGRG 103
Query: 159 GQIVQNIRSETGAQIRILKDEH-LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
G ++N ++ A+I++ EH LP ++ ++ I+G +D
Sbjct: 104 GATIRNFADDSQAEIKLSSQEHMLPGV---NERVLTITGA---------------NDRVL 145
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
R+ L+A+A+S + P+ T I + PY G D A + ++
Sbjct: 146 RAIALVATALSQDGCYEELISRPSTYT----IDGMPMPYSGINNDFAAAVNHNVEHGRSQ 201
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D S+ + P +IG V+GKGG I++I+ SG IKV
Sbjct: 202 D--GDVISVAIDVPDEHIGAVLGKGGRTISEIQITSGIRIKV 241
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 106/211 (50%), Gaps = 23/211 (10%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+L+ + P + G +IGKGGA +N+++ ++G+ I++ S +TE + +K+ T+
Sbjct: 3 ITLKFLLPDSAAGSIIGKGGATVNELQSQTGSRIQL-SRATE-----VFPGTKDRIV-TV 55
Query: 344 SATIEAVVRLQPRCSEKIERD-SGLISFT--TRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
T +++ K+ RD GL+ +L++P + GC+IG+GG+ I ++
Sbjct: 56 YGTAPSILGAFHLMISKLVRDGEGLVGGRPHVKLVIPNASCGCIIGRGGATIRNFADDSQ 115
Query: 401 ANIRILPKEN-LPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN-----LFDREGAVS 454
A I++ +E+ LP + ++ ++ I+G D A+ V T L + L R +
Sbjct: 116 AEIKLSSQEHMLPGV---NERVLTITGANDRVLRAIALVATALSQDGCYEELISRPSTYT 172
Query: 455 TFVPVLPYIPVSENGSDGLNYESRDSKRHGR 485
+PY ++ + + +N+ + HGR
Sbjct: 173 IDGMPMPYSGINNDFAAAVNH----NVEHGR 199
>gi|344270303|ref|XP_003406985.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Loxodonta africana]
Length = 492
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 196/417 (47%), Gaps = 61/417 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 106 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 165
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 166 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 208
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 209 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 266
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 267 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 311
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 312 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 367
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 368 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 421
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 422 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 474
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
LI VSS+E +D +S TIEA++ L + S E TTRL+VP++++GC++G+GG
Sbjct: 549 LIVVSSQEIPDDPVSPTIEALILLHSKASTLAENHQ----LTTRLVVPSNKVGCILGEGG 604
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
+ITEMRR T A IR+ K + PK S D+E+VQ S
Sbjct: 605 KVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQAS 640
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 19/114 (16%)
Query: 84 GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR--VIAEELRGDEDSDGGHQVT 141
SEER++ V S E D VSP +AL +H + +AE HQ+T
Sbjct: 544 ASEERLIVVSSQ-------EIPDDPVSPTIEALILLHSKASTLAEN----------HQLT 586
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
+L+VPS+++GC++G+GG+++ +R TGA+IR+ P +ELVQ S
Sbjct: 587 TRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQAS 640
>gi|218184819|gb|EEC67246.1| hypothetical protein OsI_34185 [Oryza sativa Indica Group]
Length = 470
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
LI VSS+E +D +S TIEA++ L + S E TTRL+VP++++GC++G+GG
Sbjct: 226 LIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHQ----LTTRLVVPSNKVGCILGEGG 281
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
+ITEMRR T A IR+ K + PK S D+E+VQ S
Sbjct: 282 KVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQAS 317
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 19/114 (16%)
Query: 84 GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVT 141
SEER++ V S E D VSP +AL +H +V +AE HQ+T
Sbjct: 221 ASEERLIVVSSQ-------EIPDDPVSPTIEALILLHSKVSTLAEN----------HQLT 263
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
+L+VPS+++GC++G+GG+++ +R TGA+IR+ P +ELVQ S
Sbjct: 264 TRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQAS 317
>gi|212275472|ref|NP_001130567.1| uncharacterized protein LOC100191666 [Zea mays]
gi|194689502|gb|ACF78835.1| unknown [Zea mays]
gi|413934214|gb|AFW68765.1| hypothetical protein ZEAMMB73_642279 [Zea mays]
Length = 580
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 95/174 (54%), Gaps = 13/174 (7%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR-IGETVPGSEERVVTVYSASDE 98
P TV+R L P +K+G+IIG GE V++L +T++ +R IG + +E+ V+
Sbjct: 52 PGTTVFRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIF------ 105
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
E D+ + PA DAL +V+ + I + D + + ++L PS+Q +IG+
Sbjct: 106 --GREQLDEPLPPAMDALLRVYQQTINND---SLDVGPDNVIVRRILAPSEQAASLIGEH 160
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G ++ +I + IR+L D+ LP AL D +++I G + V KAL +AS L
Sbjct: 161 GVMINSIMEASQTDIRVLDDD-LPPVALEEDRVIEIWGSPAGVYKALELVASHL 213
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 83/165 (50%), Gaps = 2/165 (1%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ P +G +IG G + ++ +E+ A +++ + + + +E ++ L
Sbjct: 57 FRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQLDEPLPP 116
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTR-LLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
++A++R+ + D G + R +L P+ + LIG+ G +I + ++ +IR
Sbjct: 117 AMDALLRVYQQTINNDSLDVGPDNVIVRRILAPSEQAASLIGEHGVMINSIMEASQTDIR 176
Query: 405 ILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
+L ++LP +A E+D +++I G AL V + LR L DR
Sbjct: 177 VL-DDDLPPVALEEDRVIEIWGSPAGVYKALELVASHLRKYLVDR 220
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 63/94 (67%), Gaps = 4/94 (4%)
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
LI VSS+E +D +S TIEA++ L + S E TTRL+VP++++GC++G+GG
Sbjct: 567 LIVVSSQEIPDDPVSPTIEALILLHSKASTLAENHQ----LTTRLVVPSNKVGCILGEGG 622
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
+ITEMRR T A IR+ K + PK S D+E+VQ
Sbjct: 623 KVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 656
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 61/112 (54%), Gaps = 19/112 (16%)
Query: 84 GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR--VIAEELRGDEDSDGGHQVT 141
SEER++ V S E D VSP +AL +H + +AE HQ+T
Sbjct: 562 ASEERLIVVSSQ-------EIPDDPVSPTIEALILLHSKASTLAEN----------HQLT 604
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
+L+VPS+++GC++G+GG+++ +R TGA+IR+ P +ELVQ
Sbjct: 605 TRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 656
>gi|224097170|ref|XP_002310862.1| predicted protein [Populus trichocarpa]
gi|222853765|gb|EEE91312.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 117/239 (48%), Gaps = 23/239 (9%)
Query: 193 QISGEASV-VKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
+I+G +SV +KKA+ + S L D P + + S + ++ P+ + P
Sbjct: 6 KITGSSSVAIKKAVIDVTSCLQDCPPYEK----DEVDLSLGAGRRRRSGSSGEPMCSLLP 61
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
GD + P + + R++C G +IG GG+++ ++
Sbjct: 62 TYSENIATDGD---------HKKPNEQ---SQVQFRMICSHGAAGRIIGTGGSVVRALQN 109
Query: 312 ESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK-IERDSGL--- 367
++GA+I T DD L+TVS+ E E + S A++ + R E IER L
Sbjct: 110 QTGASIIFARPITNSDDRLVTVSALENLESSHSPAQNALLLVFARSIEHDIERARSLGLI 169
Query: 368 --ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQI 424
I+ T LL+P++++ CLIG+GG + +EM T A+I+I+ + +AS++D +VQ+
Sbjct: 170 EEITVTATLLLPSNKVYCLIGRGGRVDSEMIETTGADIQIMQGDQFFDLASKNDAVVQV 228
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 83/152 (54%), Gaps = 9/152 (5%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R +C G IIG GG +V+ L+ T + I + S++R+VTV +A E+
Sbjct: 84 FRMICSHGAAGRIIGTGGSVVRALQNQTGASIIFARPITNSDDRLVTV-------SALEN 136
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVIGKGGQIV 162
+ SPAQ+AL V R I ++ + VTA LL+PS+++ C+IG+GG++
Sbjct: 137 LESSHSPAQNALLLVFARSIEHDIERARSLGLIEEITVTATLLLPSNKVYCLIGRGGRVD 196
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
+ TGA I+I++ + A ++D +VQ+
Sbjct: 197 SEMIETTGADIQIMQGDQFFDLASKNDAVVQV 228
>gi|242039711|ref|XP_002467250.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
gi|241921104|gb|EER94248.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
Length = 588
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 97/174 (55%), Gaps = 13/174 (7%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR-IGETVPGSEERVVTVYSASDE 98
P +V+R L P +K+G IIG GE V++L +T++ +R IG + +E+ V+
Sbjct: 52 PGTSVFRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIF------ 105
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
E ++ + PA DAL +V+ + I +E D SDG + ++LVPS+Q +IG+
Sbjct: 106 --GREQPEEPLPPAMDALLRVYQQTINDE-SLDVGSDG--VIVRRILVPSEQAESLIGEH 160
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G ++ +I + IR+L D LP AL D +V+I G + V KAL +AS L
Sbjct: 161 GVMINSIMEASQTDIRVL-DGDLPPVALEEDRVVEIWGLPARVHKALELVASHL 213
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 87/167 (52%), Gaps = 6/167 (3%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ P +G +IG G + ++ +E+ A +++ + + + +E E+ L
Sbjct: 57 FRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQPEEPLPP 116
Query: 346 TIEAVVRL--QPRCSEKIERDS-GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
++A++R+ Q E ++ S G+I R+LVP+ + LIG+ G +I + ++ +
Sbjct: 117 AMDALLRVYQQTINDESLDVGSDGVI--VRRILVPSEQAESLIGEHGVMINSIMEASQTD 174
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
IR+L +LP +A E+D +V+I G AL V + LR L DR
Sbjct: 175 IRVL-DGDLPPVALEEDRVVEIWGLPARVHKALELVASHLRKYLVDR 220
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 144/316 (45%), Gaps = 44/316 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I + E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESSARINVSEG--NCPERIVTITGPTDAI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS-------R 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P R
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGTPEAIIQCVKQICVVMLESPPKGATIPYR 181
Query: 219 SQHLLASAI-SNSHSSSGSLVGPTAA--TPIVGIAPL-----MGPYGGYKGDTAGDWSRS 270
+ A I S + +L P A + ++ PL G Y D +
Sbjct: 182 PKPATAPVIFSGGQVRADTLTAPATANLSLLLQHQPLPAYTIQGQYAIPHPDLTKLHQLA 241
Query: 271 LYSAPRD------------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
+ P D SS+ + L P IG +IG+ G IN+IRQ SGA IK
Sbjct: 242 MQQTPFTSLGQTTPAFPGVDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIK 301
Query: 319 VDSSSTEGDDCLITVS 334
+ ++ D IT++
Sbjct: 302 IANAMEGSSDRQITIT 317
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 100/231 (43%), Gaps = 75/231 (32%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R E+ A+I + + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 60 IVTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSQATSKPPV------------ 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
+ +GA ++V D L + + T+S T EA++ +C ++I
Sbjct: 127 ESTGAQVQV------AGDMLPNSTERAV---TISGTPEAII----QCVKQI 164
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ES A I V +EG+ C + T+
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESSARINV----SEGN-CPERIV-------TI 63
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 64 TGPTDAIFKAFAMIAYKFEEDIINSMSNSQATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
EMR T A +++ + LP + + V ISG +A+IQ + ++ + +
Sbjct: 124 EMRESTGAQVQVA-GDMLP---NSTERAVTISG----TPEAIIQCVKQICVVMLESPPKG 175
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 176 AT----IPYRP 182
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L +P+D IGC+IG+ G + IR +GAQI+I + SD + I+G +
Sbjct: 268 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----AMEGSSDRQITITGTPAN 322
Query: 201 VKKALCQIASRLHD 214
+ A I +R D
Sbjct: 323 ISLAQYLINARFRD 336
>gi|413944062|gb|AFW76711.1| hypothetical protein ZEAMMB73_249479 [Zea mays]
Length = 426
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 59/78 (75%), Gaps = 1/78 (1%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
TTRLLVP S I C G+ GS+ ++++R T AN++ILP+E+LP A E DE++QI G++
Sbjct: 185 ITTRLLVPASEIACFDGREGSL-SDIQRQTSANVQILPREDLPSCALESDELIQIVGEIK 243
Query: 430 LAKDALIQVMTRLRANLF 447
A++ALIQV T+LR+ L+
Sbjct: 244 AARNALIQVTTKLRSFLY 261
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/245 (27%), Positives = 112/245 (45%), Gaps = 48/245 (19%)
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D + PAQ+A+ + ++ D D + +T +LLVP+ +I C G+ G + +I
Sbjct: 157 DHELFPAQEAVLHIQTHIV------DLGPDMDNIITTRLLVPASEIACFDGREGSL-SDI 209
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ +T A ++IL E LPSCAL SDEL+QI GE + AL Q+ ++L R +
Sbjct: 210 QRQTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSFLYRE---MPD 266
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG------------------YKGDTAGDW 267
I + + + P A +P GPY G + D+ G
Sbjct: 267 PIQVGNINLHGAISPVAGSP-------RGPYQGNDIPMGAYHQASQLATSWHSKDSGGSA 319
Query: 268 SRSLY--SAPRDDL---SSKEF--------SLRLVCPVANIGGVIGKGGAIINQIRQESG 314
S S S DD+ ++K F +L +V P + + + + G+ + QI + SG
Sbjct: 320 SGSFEQGSNINDDIRQSATKRFAVPLVTRSTLEIVIPNSAVASLTMRAGSKLAQISEISG 379
Query: 315 AAIKV 319
AA+ +
Sbjct: 380 AAVTL 384
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 28/283 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 59 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 110
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 111 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 165
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 166 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 221
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFS 285
S+ G A T + G Y D + + +S+ D S +
Sbjct: 222 P--KPASTPVIFAGGQAYT-------IQGQYAIPHPDVSFHFVCLPFSSCLDA-SPPAST 271
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 272 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEGSS 313
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 67/235 (28%)
Query: 92 VYSASDETNAFEDGDKFVSPAQDAL-----FKVHDRVIAEELRGDEDSDGGHQVTA--KL 144
++S F GD +P+ L F H + + S+GG VT +L
Sbjct: 1 MFSVISSCAFFFPGDTIWAPSILPLGTLGTFSHHLQTHFGRKMESKVSEGGLNVTLTIRL 60
Query: 145 LVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
L+ ++G +IGK G+ V+ +R E+GA+I I + +C R +V I+G + KA
Sbjct: 61 LMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---IVTITGPTDAIFKA 113
Query: 205 LCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA 264
IA + ++ I NS S+S P + P V
Sbjct: 114 FAMIAYKFEED-----------IINSMSNS-----PATSKPPV----------------- 140
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+LRLV P + G +IGKGG+ I +IR+ +GA ++V
Sbjct: 141 --------------------TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 175
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 109/247 (44%), Gaps = 33/247 (13%)
Query: 249 IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
I PL G G + + R + S + + ++RL+ +G +IGK G + +
Sbjct: 22 ILPL-GTLGTFSHHLQTHFGRKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKK 80
Query: 309 IRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD---- 364
+R+ESGA I + +EG+ C + T++ +A+ + + K E D
Sbjct: 81 MREESGARINI----SEGN-CPERIV-------TITGPTDAIFKAFAMIAYKFEEDIINS 128
Query: 365 ------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED 418
+ T RL+VP S+ G LIGKGGS I E+R T A +++ + LP +
Sbjct: 129 MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NST 184
Query: 419 DEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTFVPVLPYIPVSENGSDGLNYE 476
+ V ISG DA+IQ + ++ + + +GA + P PV G +
Sbjct: 185 ERAVTISG----TPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQ 240
Query: 477 SRDSKRH 483
+ + H
Sbjct: 241 GQYAIPH 247
>gi|426217762|ref|XP_004003121.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Ovis aries]
Length = 556
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 176/388 (45%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA+ N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAA---NTHSGYFSSLCPPHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 144/326 (44%), Gaps = 82/326 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER+VT+ +D
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPTD------- 69
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVI 155
A+FK + L+ +ED + VT +L+VP+ Q G +I
Sbjct: 70 ----------AIFKAFSMI---ALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLI 116
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++
Sbjct: 117 GKGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLES 172
Query: 216 PS-----------------------RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
P R+ +LASA +H+ L P A +
Sbjct: 173 PPKGATIPYRPKPASAPIIFAGGQVRADTILASA--GNHT---VLAQPQPAPAFT----I 223
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRD------------DLSSKEFSLRLVCPVANIGGVIG 300
G Y D ++ P D +S S L P IG +IG
Sbjct: 224 QGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATSPTSSHELTIPNDLIGCIIG 283
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEG 326
+ G+ IN+IRQ SGA IK+ +++TEG
Sbjct: 284 RQGSKINEIRQMSGAQIKI-ANATEG 308
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + S IT
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFS 76
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED ++ + V +P T RL+VP S+ G LIGKGGS I
Sbjct: 77 MIALKFEEDINASMTNSTVTSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 124 KEIRESTGAQVQVA-GDMLP---NSTERAVTISGT----PDAIIQCVKQICVVMLESPPK 175
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 176 GAT----IPYRP 183
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + SC R +
Sbjct: 9 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----SCPER---I 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + ++++NS +S V
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEED-------INASMTNSTVTSKPPV------------- 101
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 102 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 STGAQVQV 136
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 144/326 (44%), Gaps = 82/326 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER+VT+ +D
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPTD------- 69
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVI 155
A+FK + L+ +ED + VT +L+VP+ Q G +I
Sbjct: 70 ----------AIFKAFSMI---ALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLI 116
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++
Sbjct: 117 GKGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLES 172
Query: 216 PS-----------------------RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
P R+ +LASA +H+ L P A +
Sbjct: 173 PPKGATIPYRPKPASAPIIFAGGQVRADTILASA--GNHT---VLAQPQPAPAFT----I 223
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRD------------DLSSKEFSLRLVCPVANIGGVIG 300
G Y D ++ P D +S S L P IG +IG
Sbjct: 224 QGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATSPTSSHELTIPNDLIGCIIG 283
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEG 326
+ G+ IN+IRQ SGA IK+ +++TEG
Sbjct: 284 RQGSKINEIRQMSGAQIKI-ANATEG 308
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 88/187 (47%), Gaps = 26/187 (13%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + S IT + F+
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFK--- 73
Query: 344 SATIEAVVRLQPRCSEKIE---RDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRR 397
A + + E I +S + S T RL+VP S+ G LIGKGGS I E+R
Sbjct: 74 -----AFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
T A +++ + LP + + V ISG DA+IQ + ++ + + +T
Sbjct: 129 STGAQVQVA-GDMLP---NSTERAVTISGT----PDAIIQCVKQICVVMLESPPKGAT-- 178
Query: 458 PVLPYIP 464
+PY P
Sbjct: 179 --IPYRP 183
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + SC R +
Sbjct: 9 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----SCPER---I 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + ++++NS
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEED-------INASMTNS--------------------- 93
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
S+ S P +LRLV P + G +IGKGG+ I +IR+
Sbjct: 94 ------------------SVTSKP-------PVTLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 STGAQVQV 136
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 181/401 (45%), Gaps = 73/401 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 189
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 190 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 231
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 232 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLRE--AFE 287
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 288 NDMLAV---NTHSGYFSSLYPPHQ---------FGPFPHH------------HSYPEQEI 323
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 324 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 371
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 372 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 428
Query: 395 MRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 429 LQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 465
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 319 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 377
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 378 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 422
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 423 GKTVNELQNLTSAEVIVPRDQ 443
>gi|301759725|ref|XP_002915743.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 556
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPPHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|395839825|ref|XP_003792776.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Otolemur garnettii]
Length = 597
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 182/401 (45%), Gaps = 55/401 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 191 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 250
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 251 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 292
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 293 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFEND 350
Query: 217 SRSQHLLASAISNSHSSSGSLV--GPTAATPIVGI--APLMGPYGGYKGDTAGDWSRSLY 272
+ + A+ I + S+ + G + P G AP PY + T + SLY
Sbjct: 351 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPSGPRGAPPAAPYHPFA--THSGYFSSLY 408
Query: 273 SA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG
Sbjct: 409 PHHQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEG 466
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRI 381
D VS + ++ EA + Q R K++ ++ + + VP+S
Sbjct: 467 PD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTA 519
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 520 GRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 556
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 423 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 481
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 482 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 526
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 527 GKTVNELQNLTSAEVIVPRDQ 547
>gi|345309017|ref|XP_001516066.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 679
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 192/423 (45%), Gaps = 70/423 (16%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G +K L T+SK+ I + G+ E+ +T+++ +
Sbjct: 269 PLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEG 328
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGK 157
++ +A R+I E ++ + D + ++ K+L + +G +IGK
Sbjct: 329 SS-------------EAC-----RLILEIMQKEADETKSAEEIPLKILAHNSLVGRLIGK 370
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL----- 212
G+ ++ I +TG +I I + L + + + G A +I +L
Sbjct: 371 EGRNLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGSIEACSNAEVEIMKKLREAYE 428
Query: 213 HDNPSRSQH-------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY--G 257
+D + +Q + ++ +S S++G G TAA+P A PY G
Sbjct: 429 NDVVAVNQQANLIPGLNLSALGIFSTGLSMLPSTAGPH-GATAASPYNPFAS-HSPYLSG 486
Query: 258 GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
Y G + +S P ++ + L P +G +IGK G I Q+ + +GA+I
Sbjct: 487 LYGASRVGAFPHQ-HSVPEQEV------VNLFIPTQAVGAIIGKKGQHIKQLARFAGASI 539
Query: 318 KVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTT 372
K+ + EG D +S+ ++ EA + Q R K++ ++ +
Sbjct: 540 KI--APAEGPD-----ASERMV--IITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEA 590
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLA 431
+ VP+S G +IGKGG + E++ LT A + I+P++ P E++E +V+I G +
Sbjct: 591 HIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVKIIGHFFAS 646
Query: 432 KDA 434
+ A
Sbjct: 647 QTA 649
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 142/300 (47%), Gaps = 39/300 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + ++ +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPRKGVTVVVA 179
Query: 226 ----------AISNSHSSSGSLVGP--------TAATPIVGIAPLMGPYGGYKG-DTAGD 266
A +++ G P A PL + G D A
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGTDRAVP 239
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
+ RS ++ D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 240 FVRSPWAC--LDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 296
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD--RE 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + R+
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPRK 172
Query: 451 GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
G P PV G + + + H
Sbjct: 173 GVTVVVAPKPASTPVIFAGGQAYTIQGQYAIPH 205
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
>gi|332215033|ref|XP_003256641.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Nomascus leucogenys]
gi|397470079|ref|XP_003806661.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Pan paniscus]
gi|179479950|gb|ACB86627.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 493
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 181/401 (45%), Gaps = 73/401 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 189
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 190 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 231
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 232 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFE 287
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 288 NDMLAV---NTHSGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEI 323
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 324 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 371
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 372 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 428
Query: 395 MRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 429 LQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 465
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 319 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 377
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 378 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 422
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 423 GKTVNELQNLTSAEVIVPRDQ 443
>gi|291400301|ref|XP_002716510.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 556
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEAEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|332242549|ref|XP_003270447.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Nomascus leucogenys]
Length = 579
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/416 (22%), Positives = 198/416 (47%), Gaps = 55/416 (13%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G+ ++ I +T +I I + L + + + G KA +I ++ ++
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRES--- 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +AS +H G + +G+ P P G T+G S P+ +
Sbjct: 351 YENDIASMNVQTHLIPGLNLND------LGLFP---PTSGMPPPTSGPPSAMTPPYPQFE 401
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 402 QSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV---- 454
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG +
Sbjct: 455 ---IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLRAN 445
E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++ +
Sbjct: 512 ELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVKQH 563
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 140/321 (43%), Gaps = 72/321 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E T P ER+VT+ +D
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEGTCP---ERIVTITGPTD------- 69
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVI 155
A+FK + L+ +ED + VT +L+VP+ Q G +I
Sbjct: 70 ----------AIFKAFSMI---ALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLI 116
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++
Sbjct: 117 GKGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLES 172
Query: 216 PSRSQ------------------HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG 257
P + + A I S + L P A + G Y
Sbjct: 173 PPKGATIPYRPKPASAPIIFAGGQVRADTILASAGNHTVLAQPQPAPAFT----IQGQYA 228
Query: 258 GYKGDTAGDWSRSLYSAPRD------------DLSSKEFSLRLVCPVANIGGVIGKGGAI 305
D ++ P D ++ S L P IG +IG+ G+
Sbjct: 229 IPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATTPTSSHELTIPNDLIGCIIGRQGSK 288
Query: 306 INQIRQESGAAIKVDSSSTEG 326
IN+IRQ SGA IK+ +++TEG
Sbjct: 289 INEIRQMSGAQIKI-ANATEG 308
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 88/187 (47%), Gaps = 26/187 (13%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + + IT + F+
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGTCPERIVTITGPTDAIFK--- 73
Query: 344 SATIEAVVRLQPRCSEKIE---RDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRR 397
A + + E I +S + S T RL+VP S+ G LIGKGGS I E+R
Sbjct: 74 -----AFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
T A +++ + LP + + V ISG DA+IQ + ++ + + +T
Sbjct: 129 STGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKGAT-- 178
Query: 458 PVLPYIP 464
+PY P
Sbjct: 179 --IPYRP 183
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 9 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----TCPER---I 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + ++++NS
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEED-------INASMTNS--------------------- 93
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
S+ S P +LRLV P + G +IGKGG+ I +IR+
Sbjct: 94 ------------------SVTSKP-------PVTLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 STGAQVQV 136
>gi|2105469|gb|AAC35208.1| putative RNA binding protein KOC [Homo sapiens]
gi|4098297|gb|AAD09223.1| Koc1 [Homo sapiens]
Length = 579
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/417 (22%), Positives = 195/417 (46%), Gaps = 61/417 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHQFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 561
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 48/189 (25%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV++++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 399 QFEQSETETVHQFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 457
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H RV
Sbjct: 458 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRV----------------------- 494
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE----LVQISGEASVVK 202
PS G VIGKGG+ V +++ + A++ + +D+ DE +V+I+G
Sbjct: 495 PSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQ-------TPDENDQVVVKITGHFYA-- 545
Query: 203 KALCQIASR 211
CQ+A R
Sbjct: 546 ---CQVAQR 551
>gi|296491333|tpg|DAA33396.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 2
[Bos taurus]
Length = 556
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPPHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 38/293 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ + A + + ++ P T + +A P+ G T +
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPL-GQTNPAF------ 264
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
P D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 265 -PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 315
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 51/180 (28%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 191
Query: 100 ---------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAE 126
A+ ++ P D L K+H + +
Sbjct: 192 KQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQ 251
Query: 127 E-----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 252 TPFPPLGQTNPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 309
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 32/212 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
A + P PV G + + + H
Sbjct: 206 ATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 237
>gi|301786262|ref|XP_002928556.1| PREDICTED: RNA-binding protein Nova-2-like [Ailuropoda melanoleuca]
Length = 329
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 137/300 (45%), Gaps = 46/300 (15%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 22 TKRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 130
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 131 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 187
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
V KA+ I ++ ++P S L + S ++ GP A + P PY
Sbjct: 188 QVHKAVSAIVQKVQEDPQSSSCL--------NISYANVAGPVANS-----NPTGSPYAS- 233
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D A + ++ L + + P +G ++GKGG + + ++ +GA I++
Sbjct: 234 PADLAAESAKEL--------------VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 279
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|56118219|ref|NP_001007226.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform b [Homo
sapiens]
gi|4883681|gb|AAD31596.1|AF057352_1 hepatocellular carcinoma autoantigen [Homo sapiens]
gi|119598615|gb|EAW78209.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Homo sapiens]
gi|410223072|gb|JAA08755.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251294|gb|JAA13614.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302888|gb|JAA30044.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342485|gb|JAA40189.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 556
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 38/293 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ + A + + ++ P T + +A P+ G T +
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPL-GQTNPAF------ 264
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
P D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 265 -PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 315
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 51/180 (28%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 191
Query: 100 ---------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAE 126
A+ ++ P D L K+H + +
Sbjct: 192 KQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQ 251
Query: 127 E-----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 252 TPFPPLGQTNPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 309
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 32/212 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
A + P PV G + + + H
Sbjct: 206 ATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 237
>gi|332215031|ref|XP_003256640.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Nomascus leucogenys]
Length = 556
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 144/292 (49%), Gaps = 36/292 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I+ + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIISS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 223 -------LASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
+ A +++ G P T + +A P+ G T + L ++
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL-GQTNPAFPAGLDAS 238
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
P S+ E ++ P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 239 P--PASTHELTI----PNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 283
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + S++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IISSMSNSPATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +S+ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIISSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
GA + P PV G + + + H
Sbjct: 173 GATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 205
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 47/178 (26%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEE---------------- 87
R + P + GS+IG+GG +K++R T +++++ G+ +P S E
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 159
Query: 88 -RVVTVYSASDETNA--------------FEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
++ V S A F G + Q A L K+H + +
Sbjct: 160 KQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQT 219
Query: 128 L-----RGDEDSDGGHQV-----TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+ + G T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 PFPPLGQTNPAFPAGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 277
>gi|293331673|ref|NP_001170496.1| uncharacterized protein LOC100384498 [Zea mays]
gi|238005660|gb|ACR33865.1| unknown [Zea mays]
Length = 239
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 89/175 (50%), Gaps = 32/175 (18%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
RLLVP IGCLIG+GGSI+ +MR+ TKANI ++ K + P+ AS DE+V++SG+ D
Sbjct: 1 MNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANI-LISKGDKPRRASSSDELVEVSGEAD 59
Query: 430 LAKDALIQVMTRLRANLF---------DREGAVS---------TFVPVLPYIPVSENGSD 471
+DAL+Q++ RLR + DR+G ++ + +P+ +P ++ +
Sbjct: 60 KLRDALVQIILRLREAVLKESVESQNSDRDGQLTVAASDSLYGSSLPLPALLPHNQQIAP 119
Query: 472 GLNYESRDSKRHGRGPPYGGYGSSDLAAGDSYGSYGSSQLGGTGSAYGSYGSYSS 526
L Y+ R G L SYG S + T YG SY+S
Sbjct: 120 -LGYDRR------------GEPERALEVFPRTSSYGYSSMQVTDDGYGGLPSYAS 161
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 103/219 (47%), Gaps = 54/219 (24%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+ +LLVP+ IGC+IG+GG IV ++R +T A I I K + P A SDELV++SGEA
Sbjct: 1 MNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDK-PRRASSSDELVEVSGEAD 59
Query: 200 VVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGPTAATPIV-- 247
++ AL QI RL + N R L +A S SL G + P +
Sbjct: 60 KLRDALVQIILRLREAVLKESVESQNSDRDGQLTVAA-------SDSLYGSSLPLPALLP 112
Query: 248 ---GIAPLMGPYGGYKGDTAGDWSRSLYSAPR------------DD-------LSSKEFS 285
IAPL GY D G+ R+L PR DD +SK +
Sbjct: 113 HNQQIAPL-----GY--DRRGEPERALEVFPRTSSYGYSSMQVTDDGYGGLPSYASKAYE 165
Query: 286 -----LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
L + P + I V+GK G ++ IR+ SGA I++
Sbjct: 166 EHVPRLEMTVPASGISKVMGKHGTNLDNIRKISGAHIEI 204
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 8/99 (8%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE-D 104
R L P + IG +IGRGG IV +R TK+ I I + G + R S+SDE +
Sbjct: 4 RLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISK---GDKPRRA---SSSDELVEVSGE 57
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRG-DEDSDGGHQVTA 142
DK + ++ + V+ E + + D DG V A
Sbjct: 58 ADKLRDALVQIILRLREAVLKESVESQNSDRDGQLTVAA 96
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 174/388 (44%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 125 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 184
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D ++ K+L + +G +IGK G
Sbjct: 185 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 226
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 227 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLRE--AFE 282
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 283 NDMLAV---NTHSGYFSSLYPPHQ---------FGPFPHH------------HSYPEQEI 318
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 319 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 366
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 367 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 423
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 424 LQNLTSAEV-IVPRDQTP---DENEEVI 447
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 314 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 372
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 373 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 417
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 418 GKTVNELQNLTSAEVIVPRDQ 438
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 137/290 (47%), Gaps = 27/290 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 44 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 103
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 104 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 160
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ P + +V +SGE V KA+ I ++ ++P S
Sbjct: 161 VKAVMEQSGAWVQL---SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 217
Query: 222 L------LASAISNSHSSSGSLVGPTAATPIVGIAP------LMGPYGGYKGDTAGDWSR 269
L +A ++NS+ + P P A L+GP G G G +
Sbjct: 218 LNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLLGP-AGLAG--VGAFPA 274
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+L + DL +KE + + P +G ++GKGG + + ++ +GA I++
Sbjct: 275 ALPAFSGTDL-AKEL-VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 322
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 40 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 99
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 100 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 157
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 158 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 209
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 91/224 (40%), Gaps = 52/224 (23%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
D D + G K+L+PS G +IGKGGQ + ++ ETGA I++ K +
Sbjct: 33 DRDGEEGEYFL-KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVC 91
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
LVQ G A + IA ++ + P Q + + N
Sbjct: 92 LVQ--GTAEALNAVHSFIAEKVREIP---QAMTKPEVVN--------------------- 125
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
++ P D A +L+ P + G +IGKGGA + +
Sbjct: 126 -ILQPQTTMNPDRAKQ-------------------AKLIVPNSTAGLIIGKGGATVKAVM 165
Query: 311 QESGAAIKVDSSSTEGDDC---LITVSSK-EFFEDTLSATIEAV 350
++SGA +++ S EG + ++TVS + E +SA ++ V
Sbjct: 166 EQSGAWVQL-SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKV 208
>gi|197101075|ref|NP_001125573.1| insulin-like growth factor 2 mRNA-binding protein 2 [Pongo abelii]
gi|75041981|sp|Q5RB68.1|IF2B2_PONAB RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|55728499|emb|CAH90992.1| hypothetical protein [Pongo abelii]
Length = 556
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
>gi|109042331|ref|XP_001095005.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Macaca mulatta]
gi|402860701|ref|XP_003894761.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Papio anubis]
Length = 556
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEV 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 41/199 (20%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS---STEGDDCLITVSSKE 337
++E L+++ +G +IGK G + +I E+G I + S S + ITV
Sbjct: 272 AEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKG-- 329
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERD-------SGLISF-------------------- 370
T+ A A + + + E E D SG S
Sbjct: 330 ----TVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQE 385
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 386 VVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 441
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 442 QFKAQGRIFGKLKEENFFN 460
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 38/293 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ + A + + ++ P T + +A P+ G T +
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPL-GQTNPAF------ 232
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
P D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 233 -PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 283
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 51/180 (28%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 159
Query: 100 ---------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAE 126
A+ ++ P D L K+H + +
Sbjct: 160 KQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQ 219
Query: 127 E-----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 TPFPPLGQTNPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 277
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
GA + P PV G + + + H
Sbjct: 173 GATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 205
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 139/293 (47%), Gaps = 38/293 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ + A + + ++ P T + +A P+ G T +
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPL-GQTNPAF------ 232
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
P D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 233 -PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 283
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 51/180 (28%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 159
Query: 100 ---------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAE 126
A+ ++ P D L K+H + +
Sbjct: 160 KQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQ 219
Query: 127 E-----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 TPFPPLGQTNPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 277
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
GA + P PV G + + + H
Sbjct: 173 GATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 205
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 193/422 (45%), Gaps = 58/422 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y + T
Sbjct: 111 DFPLRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSLEKAITIYGNPENCT 170
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + I E ++ + ++ ++T K+L ++ IG +IGKGG
Sbjct: 171 NACKK-------------------ILEVMQQEANNTNKGEITLKILAHNNLIGRIIGKGG 211
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + S L + ++ + G + KA I+S+L ++N
Sbjct: 212 NTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGSIDNMSKAESMISSKLRQSYEND 269
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q ++ + S + +G ++ P + G P PY G
Sbjct: 270 LQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQG------- 322
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P ++G +IG G+ I I + SGA++K+ + E D
Sbjct: 323 -VPASDTQETTF---LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLEQDKPAEQ 376
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
+ ++ T+ + E+ + Q EK+ R+ G ++ T +LVP++++G +IG
Sbjct: 377 QTERKV---TIVGSPESQWKAQYLIFEKM-REEGYVAGTEDVRLTIEILVPSTQVGRIIG 432
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGG + E++R+T + I++ ++ P ++E++ V I G + A R+RA +
Sbjct: 433 KGGQNVRELQRVTGSVIKLSEQQATPP-SAEEETTVHIIGPFFSVQSA----QRRIRAMV 487
Query: 447 FD 448
Sbjct: 488 LQ 489
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG--DDCLITVSSKEFFE 340
+F LR++ +G +IG+ G I QI Q + A + V G + + + E
Sbjct: 111 DFPLRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNVGSLEKAITIYGNPENCT 170
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
+ +E V++ + + K E T ++L + IG +IGKGG+ I + + T
Sbjct: 171 NACKKILE-VMQQEANNTNKGE-------ITLKILAHNNLIGRIIGKGGNTIKRIMQDTD 222
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVL 460
I + ++ E ++ + G +D A + ++LR + + A++ +
Sbjct: 223 TKITVSSINDINSFNLE--RIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSMMF 280
Query: 461 PYI-PVSENGSDGLNYESRDSKRHGRGP-PY 489
P + P++ + G+ Y SR +G GP PY
Sbjct: 281 PGLHPMAMMSTAGMGYSSRGPGLYGSGPAPY 311
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE--ERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + P + ER VT+ +
Sbjct: 329 QETTFLYI-PNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGS 387
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E + G ED ++T ++LVPS Q+G +
Sbjct: 388 PES-------------QWKAQYLIFEKMREEGYVAGTEDV----RLTIEILVPSTQVGRI 430
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
IGKGGQ V+ ++ TG+ I++ + + P A
Sbjct: 431 IGKGGQNVRELQRVTGSVIKLSEQQATPPSA 461
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 50/299 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPRKGVTV--- 176
Query: 226 AISNSHSSSGSLVGPT-AATPIV---GIA-PLMGPYGGYKGDTAGDWSRSLYSAPRD--- 277
+V P A+TP++ G A + G Y D ++ P
Sbjct: 177 -----------VVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLG 225
Query: 278 ----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 226 QTNPAFPAGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 283
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD--RE 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + R+
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPRK 172
Query: 451 GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
G P PV G + + + H
Sbjct: 173 GVTVVVAPKPASTPVIFAGGQAYTIQGQYAIPH 205
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 74/178 (41%), Gaps = 47/178 (26%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVV------------- 90
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER V
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 159
Query: 91 ---------------TVYSASDETNA---FEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
TV A + F G + Q A L K+H + +
Sbjct: 160 KQICVVMLESPRKGVTVVVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQT 219
Query: 128 L-----RGDEDSDGGHQV-----TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+ + G T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 PFPPLGQTNPAFPAGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 277
>gi|413935391|gb|AFW69942.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 468
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/301 (28%), Positives = 140/301 (46%), Gaps = 34/301 (11%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV--PGSEER 88
D R ++ P +V+R + P K+G IIGR G+ +K+L +T++++R+ + G+ R
Sbjct: 86 DARPRWPGWPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSR 145
Query: 89 VVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA------ 142
+V V SA +E A +SPA +A K+ + E D +SDG A
Sbjct: 146 IVLV-SAREEVEAE------LSPAMNAAIKIFKHINEIE---DINSDGTLMAPAPEISSV 195
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+LLVP Q VIGK G +++I+ TG+ +RI+ ++ L S + +V+I+G + V
Sbjct: 196 RLLVPFAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVL 255
Query: 203 KALCQIASRLHDNPSRS--QHLLASAISNSHSSSGSLVGPTAATPIVGIAP-LMGPYGGY 259
AL + L HL S P + + G P PY
Sbjct: 256 NALKLVLGLLRKFLVDHGVLHLFERKNPEVAQPQQSRGNPKGSRFLYGHDPSFHAPY--- 312
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
SR L S P D L +K + + P+A++G +IG G + IR SGA + +
Sbjct: 313 --------SRDL-SQPADSLITK-ITRTMQIPLADVGEIIGVRGENVELIRSVSGAVVVL 362
Query: 320 D 320
+
Sbjct: 363 E 363
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC---LITVSSKEFFEDT 342
RLV P +GG+IG+ G I ++ E+ A ++V + GD ++ VS++E E
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRV-LDAPHGDGAFSRIVLVSAREEVEAE 158
Query: 343 LSATIEAVVRLQPRCSE--KIERDSGLIS-----FTTRLLVPTSRIGCLIGKGGSIITEM 395
LS + A +++ +E I D L++ + RLLVP ++ +IGK G I +
Sbjct: 159 LSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSI 218
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
+ T + +RI+ ++ L + + +V+I+G +AL V+ LR L D G +
Sbjct: 219 QESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDH-GVLHL 277
Query: 456 F 456
F
Sbjct: 278 F 278
>gi|345485195|ref|XP_001603038.2| PREDICTED: far upstream element-binding protein 1-like isoform 1
[Nasonia vitripennis]
Length = 767
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/387 (22%), Positives = 167/387 (43%), Gaps = 57/387 (14%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED----- 104
P + +G IIGRGGE + +L+ +T KI++ G ER T+ + D N ++
Sbjct: 101 PDKMVGLIIGRGGEQITRLQSETGCKIQMAAESGGMPERTCTLTGSRDAVNRAKELVQSI 160
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSD----GGHQVTAKLLVPSDQIGCVIGKGGQ 160
++ V P +D + + GH ++++P ++G +IGKGG+
Sbjct: 161 VNQRVKPGEDLIPGANPPYPGPASSASSSVTASILAGHPGFVEIMIPGPKVGLIIGKGGE 220
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA-------LCQIASRLH 213
++ ++ ++GA++ +++D ++ ++I+G+ V+ A + + +L+
Sbjct: 221 TIKQLQEKSGAKMVVIQD----GPGQEQEKPLRITGDPQKVEHAKQLVYELIAEKEMQLY 276
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ +R+ S + +S SG G+ YG ++G+ + +S
Sbjct: 277 NRGTRNFSSNNSFSQDGNSESGEDRRGN------GVTGRPSEYGSWEGNRPAGEGKVEFS 330
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLIT 332
P P G +IGKGG I +I Q++GA ++D + D D T
Sbjct: 331 YP--------------VPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGTDTDKFFT 376
Query: 333 V--------SSKEFFEDTLSATIEAVVRLQP--RCSE----KIERDSGLISFTTRLLVPT 378
+ +K F + L + + P R +E + R + T VPT
Sbjct: 377 IRGTPEQVEHAKRVFAEKLGGGMGSSSNGYPTGRPNEYGGWDVNRQGNKVEVT--YPVPT 434
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRI 405
++ G +IGKGG I ++ + T A+ +
Sbjct: 435 NKCGIIIGKGGETIKQINQQTGAHCEL 461
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 48/194 (24%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+ Y P K G IIG+GG +K++ T + + PG+ D
Sbjct: 329 FSYPVPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGT------------------D 370
Query: 105 GDKFV----SPAQDALFKVHDRVIAEELR-------------------GDEDSDGGHQVT 141
DKF +P Q K RV AE+L G + + G++V
Sbjct: 371 TDKFFTIRGTPEQVEHAK---RVFAEKLGGGMGSSSNGYPTGRPNEYGGWDVNRQGNKVE 427
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
VP+++ G +IGKGG+ ++ I +TGA + D P +++ I G V
Sbjct: 428 VTYPVPTNKCGIIIGKGGETIKQINQQTGAHCEL--DRRNP--GTETEKFFTIKGTPEQV 483
Query: 202 KKALCQIASRLHDN 215
+ A + +L +N
Sbjct: 484 EHAQRIFSEKLGNN 497
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 112/305 (36%), Gaps = 83/305 (27%)
Query: 144 LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKK 203
+ VP +G +IG+GG+ + ++SETG +I Q++ E+ + +
Sbjct: 98 IRVPDKMVGLIIGRGGEQITRLQSETGCKI-------------------QMAAESGGMPE 138
Query: 204 ALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT 263
C + D +R++ L+ S I N G + P A P G A
Sbjct: 139 RTCTLTGS-RDAVNRAKELVQS-IVNQRVKPGEDLIPGANPPYPGPA------------- 183
Query: 264 AGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DS 321
S + S L+ + ++ P +G +IGKGG I Q++++SGA + V D
Sbjct: 184 ----SSASSSVTASILAGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDG 239
Query: 322 SSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD----------------- 364
E + L + E E + + + + R+
Sbjct: 240 PGQEQEKPLRITGDPQKVEHAKQLVYELIAEKEMQLYNRGTRNFSSNNSFSQDGNSESGE 299
Query: 365 ------------------------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
G + F+ VP+++ G +IGKGG I E+ + T
Sbjct: 300 DRRGNGVTGRPSEYGSWEGNRPAGEGKVEFS--YPVPSNKCGIIIGKGGVTIKEINQQTG 357
Query: 401 ANIRI 405
A+ +
Sbjct: 358 AHCEL 362
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 38/183 (20%), Positives = 85/183 (46%), Gaps = 29/183 (15%)
Query: 291 PVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVS------SKEFFEDT 342
P +G +IG+GG I +++ E+G I++ +S C +T S +KE +
Sbjct: 101 PDKMVGLIIGRGGEQITRLQSETGCKIQMAAESGGMPERTCTLTGSRDAVNRAKELVQSI 160
Query: 343 LSATIEAVVRLQPRCSEKIERD-------------SGLISFTTRLLVPTSRIGCLIGKGG 389
++ ++ L P + +G F +++P ++G +IGKGG
Sbjct: 161 VNQRVKPGEDLIPGANPPYPGPASSASSSVTASILAGHPGFV-EIMIPGPKVGLIIGKGG 219
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD---LDLAKDALIQVMTRLRANL 446
I +++ + A + ++ ++ P E ++ ++I+GD ++ AK + +++ L
Sbjct: 220 ETIKQLQEKSGAKMVVI--QDGP--GQEQEKPLRITGDPQKVEHAKQLVYELIAEKEMQL 275
Query: 447 FDR 449
++R
Sbjct: 276 YNR 278
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 193/422 (45%), Gaps = 58/422 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y + T
Sbjct: 120 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGNPENCT 179
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + I E ++ + ++ ++T K+L ++ IG +IGKGG
Sbjct: 180 NACKK-------------------ILEVMQQEANNTNKGEITLKILAHNNLIGRIIGKGG 220
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + S L + ++ + G + KA I+S+L ++N
Sbjct: 221 NTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGSIDNMSKAESMISSKLRQSYEND 278
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q ++ + S + +G ++ P + G P PY G
Sbjct: 279 LQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQG------- 331
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P ++G +IG G+ I I + SGA++K+ + E D
Sbjct: 332 -VPASDTQETTF---LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLEQDKPAEQ 385
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
+ ++ T+ + E+ + Q EK+ R+ G ++ T +LVP++++G +IG
Sbjct: 386 QTERKV---TIVGSPESQWKAQYLIFEKM-REEGYVAGTEDVRLTIEILVPSTQVGRIIG 441
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGG + E++R+T + I++ ++ P ++E++ V I G + A R+RA +
Sbjct: 442 KGGQNVRELQRVTGSVIKLSEQQATPP-SAEEETTVHIIGPFFSVQSA----QRRIRAMV 496
Query: 447 FD 448
Sbjct: 497 LQ 498
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE--ERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + P + ER VT+ +
Sbjct: 338 QETTFLYI-PNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGS 396
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E + G ED ++T ++LVPS Q+G +
Sbjct: 397 PES-------------QWKAQYLIFEKMREEGYVAGTEDV----RLTIEILVPSTQVGRI 439
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
IGKGGQ V+ ++ TG+ I++ + + P A
Sbjct: 440 IGKGGQNVRELQRVTGSVIKLSEQQATPPSA 470
>gi|348522861|ref|XP_003448942.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Oreochromis niloticus]
Length = 588
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 101/419 (24%), Positives = 186/419 (44%), Gaps = 66/419 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T SKI I + G+ E+ +T++S D +
Sbjct: 194 DIPLRMLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITIHSTPDGCS 253
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+A + D + E L D+ ++ K+L + +G +IGK G+
Sbjct: 254 -------------NACKTIMDIMQKEAL----DTKFTEEIPLKILAHNSFVGRLIGKEGR 296
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
++ I ETG +I I L+D L + + + G KA ++ ++ +++
Sbjct: 297 NLKKIEQETGTKITISPLQDLTL----YNPERTITVKGSIEACAKAEEEVMKKIRESYES 352
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG---PYGGYKGDTAGDWSRSLY 272
+ +L ++ I + ++ L PT A G+ P M P G + G S S
Sbjct: 353 DMAAMNLQSNLIPGLNLNALGLF-PTTAP---GMGPSMSSITPPGAHGG------SSSFG 402
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P + ++ L P +G +IGK G I Q+ +GA+IK+ + EG D
Sbjct: 403 GHPESE------TVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKI--APAEGMDAKQR 454
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ + EA + Q R K++ ++ + + VP G +IGK
Sbjct: 455 MV-------IIVGPPEAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPAFAAGRVIGK 507
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL---DLAKDALIQVMTRLR 443
GG + E++ LT A + ++P++ P D +V+ISG LA+ + +++ ++R
Sbjct: 508 GGKTVNELQNLTCAEV-VVPRDQTPD--ENDQVIVKISGHFFACQLAQRKIQEILAQVR 563
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 88/198 (44%), Gaps = 24/198 (12%)
Query: 255 PYGGYKGDTAGDWSRS----LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
P GG +G A RS L + P+ + LR++ P +G +IGK GA I I
Sbjct: 165 PAGGRRGFNARGPPRSGSPGLGARPK---VQSDIPLRMLVPTQFVGAIIGKEGATIRNIT 221
Query: 311 QESGAAIKVDSSSTEG-DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS 369
+++ + I + G + IT+ S D S + ++ + +++++
Sbjct: 222 KQTHSKIDIHRKENAGAAEKPITIHST---PDGCSNACKTIMDI-------MQKEALDTK 271
Query: 370 FT----TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
FT ++L S +G LIGK G + ++ + T I I P ++L + + +
Sbjct: 272 FTEEIPLKILAHNSFVGRLIGKEGRNLKKIEQETGTKITISPLQDL--TLYNPERTITVK 329
Query: 426 GDLDLAKDALIQVMTRLR 443
G ++ A +VM ++R
Sbjct: 330 GSIEACAKAEEEVMKKIR 347
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 79/181 (43%), Gaps = 41/181 (22%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I +++R+V +
Sbjct: 405 PESETVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDAKQRMVII------ 458
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
V P +A FK R+ E G ++ ++ A + VP+ G V
Sbjct: 459 ----------VGPP-EAQFKAQCRIFGKLKEENFFGPKEEV---KLEAHIKVPAFAAGRV 504
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE----LVQISGEASVVKKALCQIAS 210
IGKGG+ V +++ T A++ + +D+ DE +V+ISG CQ+A
Sbjct: 505 IGKGGKTVNELQNLTCAEVVVPRDQ-------TPDENDQVIVKISGHFFA-----CQLAQ 552
Query: 211 R 211
R
Sbjct: 553 R 553
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 104/409 (25%), Positives = 183/409 (44%), Gaps = 71/409 (17%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 198 DFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 257
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A A + + + A E + ED + K+L + +G +IGK G+
Sbjct: 258 A----------ACRMILDIMQKE-ANETKTTED------IPLKILAHNSLVGRLIGKEGR 300
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPS 217
++ I +TG +I I + L + + + G KA +I +L ++N
Sbjct: 301 NLKKIEEDTGTKITISSLQDL--TIYNPERTITVKGSIDACCKAEVEITKKLREAYENDI 358
Query: 218 RSQHLLASAISNSH------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+ + A+ I + SSG V P AA P + P + P
Sbjct: 359 AAINQQANLIPGLNLNALGIFSSGLPVLPPAAGPRSAV-PAVAPQ--------------- 402
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
AP ++ + L P +G +IGK G I Q+ +GA+IK+ + E D
Sbjct: 403 -QAPEQEV------VYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKI--APAESPD--- 450
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIG 386
V+ + ++ T EA + Q R K++ ++ + T + VP+S G +IG
Sbjct: 451 -VTERMVI---ITGTPEAQFKAQGRIFGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIG 506
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
KGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 507 KGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 551
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASD 97
PE V P + +G++IG+ G+ +KQL + I+I P ER+V + + +
Sbjct: 404 APEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMV-IITGTP 462
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E G F ++ F + V ++ + VPS G VIGK
Sbjct: 463 EAQFKAQGRIFGKLKEENFFSAKEEV---------------KLETHIKVPSSAAGRVIGK 507
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASRLHDNP 216
GG+ V +++ T A++ + +D+ +DE V+ISG + A +I +
Sbjct: 508 GGKTVNELQNLTSAEVIVPRDQ----TPDENDEVFVKISGHFFASQTAQRKIREIIQQVK 563
Query: 217 SRSQ-HLLASAISNSHS 232
+ Q H +A+S HS
Sbjct: 564 QQEQKHQQGAAVSPHHS 580
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 145/305 (47%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMRDESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-------GYKGDT--- 263
+ + A + + ++ P T + +A P+ + G+
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLSL 239
Query: 264 -AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ + +++L P D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 240 HSSEEAQNLMGQPSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 298
Query: 322 SSTEG 326
++TEG
Sbjct: 299 NATEG 303
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 87/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 173 GAT----IPYRP 180
>gi|224079280|ref|XP_002305814.1| predicted protein [Populus trichocarpa]
gi|222848778|gb|EEE86325.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 62/87 (71%), Gaps = 6/87 (6%)
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S TIEA+++LQ + SE E+ G+I TRLLVP+S++GC++G+G I EMRRL +A I
Sbjct: 61 SQTIEAILQLQNKTSEFSEK--GMI---TRLLVPSSKVGCILGQGSQDINEMRRL-QAEI 114
Query: 404 RILPKENLPKIASEDDEMVQISGDLDL 430
R+ PK PK ASED+E+VQ + ++
Sbjct: 115 RVYPKNEKPKCASEDEELVQANNSPNM 141
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
+ ++ + + E S+ G + +LLVPS ++GC++G+G Q + +R A+IR+
Sbjct: 65 EAILQLQNKTSEFSEKG--MITRLLVPSSKVGCILGQGSQDINEMR-RLQAEIRVYPKNE 121
Query: 181 LPSCALRSDELVQ 193
P CA +ELVQ
Sbjct: 122 KPKCASEDEELVQ 134
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 144/305 (47%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-------GYKGD---- 262
+ + A + + ++ P T + +A P+ + G+
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTTPAFPGEKLPL 239
Query: 263 -TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
++ + + +P D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 240 HSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 298
Query: 322 SSTEG 326
++TEG
Sbjct: 299 NATEG 303
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 173 GAT----IPYRP 180
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 139/292 (47%), Gaps = 37/292 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 223 -------LASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
+ A +++ G P T + +A P+ G T +
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL-GQTTPAF------- 231
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
P D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 232 PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 282
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
GA + P PV G + + + H
Sbjct: 173 GATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 205
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 159
Query: 100 ---------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAE 126
A+ ++ P D L K+H + +
Sbjct: 160 KQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPD-LTKLHQLAMQQ 218
Query: 127 E-----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 219 TPFPPLGQTTPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 276
>gi|148665207|gb|EDK97623.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_d
[Mus musculus]
Length = 603
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 182/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 197 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 256
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + +V K+L + +G +IGK G
Sbjct: 257 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 298
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 299 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFEND 356
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A V +P P+ + G + +
Sbjct: 357 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPH 416
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 417 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 474
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 475 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 527
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 528 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 562
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 429 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 487
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 488 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 532
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 533 GKTVNELQNLTSAEVIVPRDQ 553
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 433 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 488
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 489 QFKAQGRIFGKLKEENFFN 507
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 180/404 (44%), Gaps = 65/404 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y + T
Sbjct: 287 DFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPENCT 346
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + I E ++ + ++ ++ K+L ++ IG +IGKGG
Sbjct: 347 NAC-------------------KRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGG 387
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I ET +I + + S L + ++ + G + +A QI+++L ++N
Sbjct: 388 NTIKRIMQETDTKITVSSINDINSFNL--ERIITVKGAIDNMSRAEAQISAKLRQSYEND 445
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
++ Q ++ + + + +G + G AP G Y GD + Y
Sbjct: 446 LQAMAPQTMMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPGMYPAGAAQGGGDSQETTY- 504
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV---DSSSTEGDDCL 330
L P +G +IG G+ I I + SGA++K+ D + +
Sbjct: 505 --------------LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQ----- 545
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCL 384
++ T+ + EA + Q EK+ R+ G ++ T ++VP+S++G +
Sbjct: 546 ---ETQNERRVTIVGSPEAQWKAQYLIFEKM-REEGFVAGSDDVRLTVEIMVPSSQVGRI 601
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
IGKGG + E++R+T + I++ + P+ ED+ V I G
Sbjct: 602 IGKGGQNVRELQRVTGSVIKLPEQGASPQ---EDETTVHIIGPF 642
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 26/142 (18%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVP--GSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I ET P ER VT+
Sbjct: 500 QETTYLYI-PNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVG- 557
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGC 153
SP +A +K +I E++R + G V T +++VPS Q+G
Sbjct: 558 --------------SP--EAQWKAQ-YLIFEKMREEGFVAGSDDVRLTVEIMVPSSQVGR 600
Query: 154 VIGKGGQIVQNIRSETGAQIRI 175
+IGKGGQ V+ ++ TG+ I++
Sbjct: 601 IIGKGGQNVRELQRVTGSVIKL 622
>gi|74215286|dbj|BAE41861.1| unnamed protein product [Mus musculus]
Length = 530
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 188/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 124 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 183
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + +V K+L + +G +IGK G
Sbjct: 184 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 225
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 226 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFEND 283
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A V +P P+ + G + +
Sbjct: 284 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPH 343
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 344 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 401
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 402 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 454
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 455 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 502
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 356 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 414
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 415 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 459
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 460 GKTVNELQNLTSAEVIVPRDQ 480
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 360 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 415
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 416 QFKAQGRIFGKLKEENFFN 434
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 177/390 (45%), Gaps = 50/390 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 124 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 183
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + ED+ +V K+L + +G +IGK G
Sbjct: 184 -------------EAC-----RMILEIMQKEAEDTKLAEEVPLKILAHNGLVGRLIGKEG 225
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 226 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTIDACANAEMEIMKKLREAFEND 283
Query: 217 SRSQHLLASAISNSH------SSSGSLVGPTAATPIVGIAPLM--GPYGGYKGDTAGDWS 268
+ + A+ I + S+G V P A P G+ P + P+ + G +
Sbjct: 284 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGP-RGVPPSVPYHPFASHSGYFPNMYP 342
Query: 269 RSLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG
Sbjct: 343 HHHFGPFPHHHSYPEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGP 400
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIG 382
D VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 401 D----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAG 453
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLP 412
+IGKGG + E++ LT A + I+P++ P
Sbjct: 454 RVIGKGGKTVNELQNLTSAEV-IVPRDQTP 482
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 356 PEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 414
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 415 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 459
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 460 GKTVNELQNLTSAEVIVPRDQ 480
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 360 TVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 415
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 416 QFKAQGRIFGKLKEENFFN 434
>gi|148665204|gb|EDK97620.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Mus musculus]
Length = 596
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 182/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 190 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 249
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + +V K+L + +G +IGK G
Sbjct: 250 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 291
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 292 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFEND 349
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A V +P P+ + G + +
Sbjct: 350 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPH 409
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 410 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 467
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 468 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 520
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 521 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 555
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 422 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 480
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 481 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 525
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 526 GKTVNELQNLTSAEVIVPRDQ 546
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 426 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 481
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 482 QFKAQGRIFGKLKEENFFN 500
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 157/327 (48%), Gaps = 43/327 (13%)
Query: 39 GPEDTV-YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSAS 96
GP T+ R + +++GSIIG+ G+ +K+ R ++ +KI I + GS ER+VTV ++
Sbjct: 69 GPSVTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISD---GSCPERIVTVTGST 125
Query: 97 DET-NAFE-DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH----QVTAKLLVPSDQ 150
+ AF KF +L + + + L+ + S+G H VT +L+VP+ Q
Sbjct: 126 EAILKAFSLIARKFEE--MLSLLCLPVQTVGPTLQ-ELQSNGSHLPKPPVTLRLIVPASQ 182
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS 210
G +IGKGG ++ IR TGA I++ E LP+ R+ V +SG A + K + QI
Sbjct: 183 CGSLIGKGGSKIKEIREVTGASIQV-ASEMLPNSTERA---VTVSGTAEAITKCIYQICC 238
Query: 211 RLHDN-------PSRSQHLLASAI---SNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGY 259
+ ++ P R + + I +++ G P T + +A P
Sbjct: 239 VMMESPPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYAIPHPDLTKLHQLALQHAPL--L 296
Query: 260 KGDTAGDWSRSLYSA--PRDDL----------SSKEFSLRLVCPVANIGGVIGKGGAIIN 307
G + G + +A ++L ++ + + P IG +IGKGG+ IN
Sbjct: 297 PGHSVGAINPQALAALATTNNLRPNTAAAAIATASTTTTEMTIPNDLIGCIIGKGGSKIN 356
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVS 334
+IRQ SGA IK+ +S D +T+S
Sbjct: 357 EIRQLSGATIKISNSEEGSKDRTVTIS 383
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 82/173 (47%), Gaps = 16/173 (9%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS-- 335
D S ++RL+ +G +IGK G I + R+ESGA I + S +T S+
Sbjct: 68 DGPSVTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTGSTEA 127
Query: 336 --KEF------FEDTLSATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCLI 385
K F FE+ LS V + P E S L T RL+VP S+ G LI
Sbjct: 128 ILKAFSLIARKFEEMLSLLCLPVQTVGPTLQELQSNGSHLPKPPVTLRLIVPASQCGSLI 187
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
GKGGS I E+R +T A+I++ E LP + + V +SG + + Q+
Sbjct: 188 GKGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTVSGTAEAITKCIYQI 236
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 93/257 (36%), Gaps = 78/257 (30%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-----------TVPGSEE------ 87
R + P + GS+IG+GG +K++R T + I++ TV G+ E
Sbjct: 174 LRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTVSGTAEAITKCI 233
Query: 88 -RVVTVYSASDETNA--------------FEDGDKFVSPAQDA-----LFKVHDRVI--A 125
++ V S A F G + Q A L K+H + A
Sbjct: 234 YQICCVMMESPPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYAIPHPDLTKLHQLALQHA 293
Query: 126 EELRGDEDSDGGHQVTAKL-------------------------LVPSDQIGCVIGKGGQ 160
L G Q A L +P+D IGC+IGKGG
Sbjct: 294 PLLPGHSVGAINPQALAALATTNNLRPNTAAAAIATASTTTTEMTIPNDLIGCIIGKGGS 353
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG--EASVVKKALCQIASRLHDNPSR 218
+ IR +GA I+I E D V ISG EA + + L + LH N
Sbjct: 354 KINEIRQLSGATIKISNSEE-----GSKDRTVTISGTPEAINLAQYLINTSMELHKN--- 405
Query: 219 SQHLLASAISNSHSSSG 235
L +S +H +SG
Sbjct: 406 ----LTLDLSATHPASG 418
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD---LDL 430
+ +P IGC+IGKGGS I E+R+L+ A I+I E D V ISG ++L
Sbjct: 337 MTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEE-----GSKDRTVTISGTPEAINL 391
Query: 431 AKDALIQVMTRLRANL 446
A+ LI L NL
Sbjct: 392 AQ-YLINTSMELHKNL 406
>gi|145207996|ref|NP_898850.2| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
gi|81889459|sp|Q5SF07.1|IF2B2_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|46577878|gb|AAT01428.1| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
Length = 592
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 182/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 186 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 245
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + +V K+L + +G +IGK G
Sbjct: 246 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 287
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 288 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFEND 345
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A V +P P+ + G + +
Sbjct: 346 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPH 405
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 406 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 463
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 464 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 516
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 517 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 551
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 418 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 476
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 477 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 521
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 522 GKTVNELQNLTSAEVIVPRDQ 542
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 422 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 477
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 478 QFKAQGRIFGKLKEENFFN 496
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 178/392 (45%), Gaps = 53/392 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y + T
Sbjct: 187 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNLGSLEKAITIYGNPENCT 246
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + I E + + + ++T K+L ++ IG +IGKGG
Sbjct: 247 NACKK-------------------ILEVMHQEASNTNKGEITLKILAHNNLIGRIIGKGG 287
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + S L + ++ + G + KA I+++L ++N
Sbjct: 288 NTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGSIENMSKAEAMISNKLRQSYEND 345
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q ++ + S + +G + P + G P PY G +
Sbjct: 346 LQAMAPQSMMFPGLHPMAMMSTASMGYNSRGPALYGTGPAPYPYQSNLTPQQGVLT---- 401
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
D F L P ++G +IG G+ I I + SGA++K+ + E D
Sbjct: 402 ----SDAQETTF---LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLESDKPAEQ 452
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
+ ++ T+ + E+ + Q EK+ R+ G +S T +LVP++++G +IG
Sbjct: 453 QTERKV---TIVGSPESQWKAQYLIFEKM-REEGFVSGTEDVRLTVEILVPSAQVGRIIG 508
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASED 418
KGG + E++R+T + I++ ++ P A E+
Sbjct: 509 KGGQNVRELQRVTGSVIKLSEQQATPPTADEE 540
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + ER VT+ +
Sbjct: 405 QETTFLYI-PNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLESDKPAEQQTERKVTIVGS 463
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEEL-RGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G ED ++T ++LVPS Q+G +
Sbjct: 464 PES-------------QWKAQYLIFEKMREEGFVSGTEDV----RLTVEILVPSAQVGRI 506
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
IGKGGQ V+ ++ TG+ I++ + + P A
Sbjct: 507 IGKGGQNVRELQRVTGSVIKLSEQQATPPTA 537
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 191/427 (44%), Gaps = 68/427 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQL------RIDTKSKIRIGETVPGSEERVVTVYSA 95
D R L +G+IIGR G ++Q+ R+D K +G S E+ +T+Y
Sbjct: 146 DFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVG-----SLEKAITIYGN 200
Query: 96 SDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ TNA + I + ++ + S ++T K+L ++ IG +
Sbjct: 201 PENCTNACKK-------------------ILDVMQQEAASTNKGEITLKILAHNNLIGRI 241
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-- 212
IGKGG ++ I +T ++I + + S L + ++ + G + KA I+S+L
Sbjct: 242 IGKGGNTIKRIMQDTDSKITVSSINDINSFNL--ERIITVKGTIENMSKAESMISSKLRQ 299
Query: 213 -HDNPSRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDW 267
++N ++ Q ++ + S + +G ++ P + G P PY G
Sbjct: 300 SYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQG-- 357
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
P D F L P ++G +IG G+ I I + SGA++K+ + E D
Sbjct: 358 ------VPASDTQETTF---LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKI--APLEQD 406
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRI 381
+ ++ T+ + E+ + Q EK+ R+ G ++ T +LVP++++
Sbjct: 407 KPAEQQTERKV---TIIGSPESQWKAQYLIFEKM-REEGYVAGTEDVRLTIEILVPSTQV 462
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR 441
G +IGKGG + E++R+T + I++ ++ P ++E++ V I G + A R
Sbjct: 463 GRIIGKGGQNVRELQRVTGSVIKLSEQQATPP-SAEEETTVHIIGPFFSVQSA----QRR 517
Query: 442 LRANLFD 448
+RA +
Sbjct: 518 IRAMVLQ 524
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 94/210 (44%), Gaps = 12/210 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFED 341
+F LR++ +G +IG+ G+ I QI Q S A + V G + IT+
Sbjct: 146 DFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNVGSLEKAITIYGNPENCT 205
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
I V++ + + K E T ++L + IG +IGKGG+ I + + T +
Sbjct: 206 NACKKILDVMQQEAASTNKGE-------ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDS 258
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
I + ++ E ++ + G ++ A + ++LR + + A++ + P
Sbjct: 259 KITVSSINDINSFNLE--RIITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFP 316
Query: 462 YI-PVSENGSDGLNYESRDSKRHGRGP-PY 489
+ P++ + G+ Y SR +G GP PY
Sbjct: 317 GLHPMAMMSTAGMGYSSRGPGLYGSGPAPY 346
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 85/174 (48%), Gaps = 25/174 (14%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE--ERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + P + ER VT+ +
Sbjct: 364 QETTFLYI-PNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIIGS 422
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E + G ED ++T ++LVPS Q+G +
Sbjct: 423 PES-------------QWKAQYLIFEKMREEGYVAGTEDV----RLTIEILVPSTQVGRI 465
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
IGKGGQ V+ ++ TG+ I++ + + P A + V I G V+ A +I
Sbjct: 466 IGKGGQNVRELQRVTGSVIKLSEQQATPPSA-EEETTVHIIGPFFSVQSAQRRI 518
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 146/313 (46%), Gaps = 41/313 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-------GYKGD---- 262
+ + A + S ++ P T + +A P+ + G+
Sbjct: 180 PKPASAPVIFAGGQAYSIQGQYAIPHPDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPL 239
Query: 263 -TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
++ + + + D SS+ + L P IG +IG+ G IN+IRQ SGA IK+ S
Sbjct: 240 HSSEEAQNLMGQSAGMDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAS 299
Query: 322 SSTEGDDCLITVS 334
+ + IT++
Sbjct: 300 AMEGSAERQITIT 312
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 173 GAT----IPYRP 180
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
>gi|212723546|ref|NP_001131366.1| uncharacterized protein LOC100192689 [Zea mays]
gi|194691330|gb|ACF79749.1| unknown [Zea mays]
gi|413935393|gb|AFW69944.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 467
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 143/299 (47%), Gaps = 31/299 (10%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV--PGSEER 88
D R ++ P +V+R + P K+G IIGR G+ +K+L +T++++R+ + G+ R
Sbjct: 86 DARPRWPGWPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSR 145
Query: 89 VVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA------ 142
+V V SA +E A +SPA +A K+ + E D +SDG A
Sbjct: 146 IVLV-SAREEVEAE------LSPAMNAAIKIFKHINEIE---DINSDGTLMAPAPEISSV 195
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+LLVP Q VIGK G +++I+ TG+ +RI+ ++ L S + +V+I+G + V
Sbjct: 196 RLLVPFAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEVL 255
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-GGYKG 261
AL + L + L+ + + P A P P + G+
Sbjct: 256 NALKLVLGLLR------KFLVDHGVLHLFERK----NPEVAQPQSRGNPKGSRFLYGHDP 305
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
+SR L S P D L +K + + P+A++G +IG G + IR SGA + ++
Sbjct: 306 SFHAPYSRDL-SQPADSLITK-ITRTMQIPLADVGEIIGVRGENVELIRSVSGAVVVLE 362
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC---LITVSSKEFFEDT 342
RLV P +GG+IG+ G I ++ E+ A ++V + GD ++ VS++E E
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRV-LDAPHGDGAFSRIVLVSAREEVEAE 158
Query: 343 LSATIEAVVRLQPRCSE--KIERDSGLIS-----FTTRLLVPTSRIGCLIGKGGSIITEM 395
LS + A +++ +E I D L++ + RLLVP ++ +IGK G I +
Sbjct: 159 LSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSI 218
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
+ T + +RI+ ++ L + + +V+I+G +AL V+ LR L D G +
Sbjct: 219 QESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDH-GVLHL 277
Query: 456 F 456
F
Sbjct: 278 F 278
>gi|357146019|ref|XP_003573848.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 470
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 153/326 (46%), Gaps = 31/326 (9%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
G+ R ++ P +V+R + K+G +IGR GE +++L +T++++R+ + G +
Sbjct: 74 GEFRPRWPGFPGASVFRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQ 133
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS-----DGGHQVTAKL 144
+ + SA++ET A ++PA DA K+ V E+ G S +A+L
Sbjct: 134 IVLISATEETQAE------LAPAMDAAIKIFKHV--NEIEGINASVTFSASAPEICSARL 185
Query: 145 LVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
LVP +Q +IGK G ++++I+ TG+ IRI+ + L + + + +V+I G + A
Sbjct: 186 LVPKEQAAHLIGKQGIMIKSIQETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNA 245
Query: 205 LCQIA----------SRLHDNPSRSQHLL-ASAISNSHSSSGSLVGPTAATPIVG----- 248
L + S LH ++Q + A IS + S P + ++
Sbjct: 246 LKSVLGLLRKFLVDHSVLHLFERKNQAIAHAQDISKENQVSNDYALPVSRDLLLSDGQSP 305
Query: 249 IAPLMGPYGGYKGD-TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
++P Y Y D + D S P + L K+ + + P+ +IG GG I
Sbjct: 306 LSPKGNRYLSYGRDPSVCDPYSSQIRHPTESL-IKKITQTMKIPLPQADEIIGVGGRNIA 364
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITV 333
IR SGA + ++ + ++ L+T+
Sbjct: 365 HIRSVSGAIVVLEETGDYLNEVLVTI 390
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 112/246 (45%), Gaps = 26/246 (10%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTLS 344
RLV +GG+IG+ G I ++ +E+ A ++V D + ++ +S+ E + L+
Sbjct: 89 FRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQIVLISATEETQAELA 148
Query: 345 ATIEAVVRLQPRCSEKIERDSGLISFTT--------RLLVPTSRIGCLIGKGGSIITEMR 396
++A +++ +E IE + ++F+ RLLVP + LIGK G +I ++
Sbjct: 149 PAMDAAIKIFKHVNE-IEGINASVTFSASAPEICSARLLVPKEQAAHLIGKQGIMIKSIQ 207
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
T + IRI+ K++L D+ +V+I G A +AL V+ LR L D
Sbjct: 208 ETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNALKSVLGLLRKFLVDHS------ 261
Query: 457 VPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYGSSDLAAGDSYGSYGSSQLGGTGS 516
+ + E + + + SK + Y S DL D G S L G+
Sbjct: 262 -----VLHLFERKNQAIAHAQDISKENQVSNDYALPVSRDLLLSD-----GQSPLSPKGN 311
Query: 517 AYGSYG 522
Y SYG
Sbjct: 312 RYLSYG 317
>gi|395839831|ref|XP_003792779.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Otolemur garnettii]
Length = 574
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 177/391 (45%), Gaps = 58/391 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 191 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 250
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 251 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 292
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 293 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFEND 350
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+ + A+ I + S+ + G++ L P G A + Y P
Sbjct: 351 MLAVNQQANLIPGLNLSALGIFS-------TGLSVLPPPSGPRGAPPAAPYHPFAY--PE 401
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 402 QEI------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSER 449
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + + VP+S G +IGKGG
Sbjct: 450 MVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKT 506
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + I+P++ P E++E++
Sbjct: 507 VNELQNLTSAEV-IVPRDQTP---DENEEVI 533
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 400 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 458
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 459 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 503
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 504 GKTVNELQNLTSAEVIVPRDQ 524
>gi|147834901|emb|CAN63963.1| hypothetical protein VITISV_030144 [Vitis vinifera]
Length = 739
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 89/158 (56%), Gaps = 31/158 (19%)
Query: 285 SLRLVCPV---ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED 341
S R V PV A+IG VIG+GG+ I +R+ SGA ++VD + + D+CLITV+S E +D
Sbjct: 603 SARSVLPVLAAAHIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDD 662
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
S +EAV+ L+ + +++ D ++ T RLL T+A
Sbjct: 663 LKSMAVEAVLLLRAKINDE---DDDIV--TIRLL----------------------RTRA 695
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
++RI K PK A +DE++++ G++ +DAL+Q++
Sbjct: 696 DVRIS-KSERPKCADANDELIEVVGEIGSVRDALVQII 732
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 39/155 (25%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQ 113
IG +IGRGG +K +R + + + + +T +E ++TV S E D S A
Sbjct: 616 IGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTST-------ESVDDLKSMAV 668
Query: 114 DALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQI 173
+A+ + ++ DED D VT +LL T A +
Sbjct: 669 EAVLLLRAKI------NDEDDD---IVTIRLL----------------------RTRADV 697
Query: 174 RILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
RI K E P CA +DEL+++ GE V+ AL QI
Sbjct: 698 RISKSER-PKCADANDELIEVVGEIGSVRDALVQI 731
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 137/299 (45%), Gaps = 31/299 (10%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 9 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 68
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 69 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 125
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 126 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 182
Query: 222 L------LASAISNSHSSSGSLVGPTAATP------------IVGIAPL--MGPYGGYKG 261
L +A ++NS+ + P P ++G A L +G +
Sbjct: 183 LNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLLGPAGLAGVGAFPAXXX 242
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
AG L + S+KE + + P +G ++GKGG + + ++ +GA I++
Sbjct: 243 XXAGAAGGFLTAEKLAAESAKEL-VEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 300
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 5 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 64
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 65 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 122
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 123 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 174
>gi|410970835|ref|XP_003991882.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Felis catus]
Length = 536
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 187/417 (44%), Gaps = 62/417 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 189
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 190 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 231
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 232 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFEND 289
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P AP P+ + G +
Sbjct: 290 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPTGPRGAPPAPPYHPFATHSG-----YFS 344
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 345 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 402
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 403 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 455
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 456 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 508
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 362 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 420
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 421 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 465
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 466 GKTVNELQNLTSAEVIVPRDQ 486
>gi|148665206|gb|EDK97622.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Mus musculus]
Length = 543
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 188/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 137 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 196
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + +V K+L + +G +IGK G
Sbjct: 197 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 238
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 239 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFEND 296
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A V +P P+ + G + +
Sbjct: 297 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPH 356
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 357 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 414
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 415 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 467
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 468 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 515
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 369 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 427
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 428 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 472
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 473 GKTVNELQNLTSAEVIVPRDQ 493
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 373 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 428
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 429 QFKAQGRIFGKLKEENFFN 447
>gi|410970839|ref|XP_003991884.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Felis catus]
Length = 542
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/417 (24%), Positives = 187/417 (44%), Gaps = 62/417 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 136 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 195
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 196 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 237
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 238 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFEND 295
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P AP P+ + G +
Sbjct: 296 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPTGPRGAPPAPPYHPFATHSG-----YFS 350
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 351 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 408
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 409 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 461
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 462 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 514
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 368 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 426
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 427 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 471
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 472 GKTVNELQNLTSAEVIVPRDQ 492
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 143/315 (45%), Gaps = 76/315 (24%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E S ER+VT+ A++
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITGATE-------- 69
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+F+ +IA++ D + + VT +L+ P Q G +IGKG
Sbjct: 70 ---------AIFRAFA-MIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKG 119
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP R+ V ISG + + + I S + ++P +
Sbjct: 120 GSKIKEIRETTGAQVQVAGD-MLPDSTERA---VTISGTPQAITQCVRHICSVMLESPPK 175
Query: 219 SQHLLASAISNSHSSSGSLVG--PTAATPIVGIAPLMGP-YGGYKGDTAGDWS------- 268
G+ + P A T VG+ ++ P + G ++
Sbjct: 176 ----------------GATIPYRPKAVT--VGVHAVLAPQQSAHAFAIPGQYTFAHQDLT 217
Query: 269 ----------------RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+S + P D S+ S + P IG +IG+ G+ IN+IRQ
Sbjct: 218 KLHQLAMQHIPLPSLGQSNPTFPGLDPSAPTSSQEMAIPNDFIGCIIGRQGSKINEIRQV 277
Query: 313 SGAAIKVDSSSTEGD 327
SGA IK+ +S+T+G
Sbjct: 278 SGAHIKI-ASTTDGS 291
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 68/132 (51%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LRL+ +G +IGK G + ++R+ESGA I + +EG SS E T+
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEG-------SSPERIV-TI 64
Query: 344 SATIEAVVRLQPRCSEKIERD-SGLIS---------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ EA+ R ++K E D S +S T RL+ P S+ G LIGKGGS I
Sbjct: 65 TGATEAIFRAFAMIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIK 124
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 125 EIRETTGAQVQV 136
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 62/193 (32%)
Query: 129 RGDEDSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+ + SDG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I +
Sbjct: 4 KEEMSSDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGS------- 56
Query: 187 RSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPI 246
+ +V I+G + +A IA + ++ +++A+SNS
Sbjct: 57 SPERIVTITGATEAIFRAFAMIAQKFEED-------ISAAMSNS---------------- 93
Query: 247 VGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAII 306
S+ S P +LRLV P + G +IGKGG+ I
Sbjct: 94 -----------------------SVTSKP-------PVTLRLVFPGSQCGSLIGKGGSKI 123
Query: 307 NQIRQESGAAIKV 319
+IR+ +GA ++V
Sbjct: 124 KEIRETTGAQVQV 136
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/301 (27%), Positives = 142/301 (47%), Gaps = 37/301 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDTI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGTPEAIIQCVRQICVVMLESPPKGATIPYR 181
Query: 223 ---LASAISNSHSSSGSLVG------PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
++ + S + ++ G P T + +A P+ G T +
Sbjct: 182 PKPTSTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPL-GQTTPAF------ 234
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
P D S + L P IG +IG+ G IN+IRQ SGA IK+ ++ + IT+
Sbjct: 235 -PGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITI 293
Query: 334 S 334
+
Sbjct: 294 T 294
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 71/222 (31%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 60 IVTITGPTDTIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV--- 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+ +GA ++V D L + + T+S T EA+++
Sbjct: 127 ESTGAQVQV------AGDMLPNSTERAV---TISGTPEAIIQ 159
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFA 75
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 76 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 122
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
EMR T A +++ + LP + + V ISG +A+IQ + ++ + + +
Sbjct: 123 KEMRESTGAQVQVA-GDMLP---NSTERAVTISG----TPEAIIQCVRQICVVMLESPPK 174
Query: 451 GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
GA + P PV +G + + + H
Sbjct: 175 GATIPYRPKPTSTPVIFSGGQAYTIQGQYAIPH 207
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 51/180 (28%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ +
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCV 161
Query: 100 ---------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAE 126
A+ ++ P D L K+H + +
Sbjct: 162 RQICVVMLESPPKGATIPYRPKPTSTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQ 221
Query: 127 E-----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 222 TPFTPLGQTTPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 279
>gi|281348784|gb|EFB24368.1| hypothetical protein PANDA_018514 [Ailuropoda melanoleuca]
Length = 346
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 137/306 (44%), Gaps = 41/306 (13%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 22 TKRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 130
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 131 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 187
Query: 200 VVKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATPIVGIAPLM 253
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 188 QVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP-------- 239
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
A + +A + S + + + P +G ++GKGG + + ++ +
Sbjct: 240 ---------AAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELT 290
Query: 314 GAAIKV 319
GA I++
Sbjct: 291 GARIQI 296
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|395839827|ref|XP_003792777.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Otolemur garnettii]
Length = 554
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/388 (23%), Positives = 174/388 (44%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 191 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 250
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 251 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 292
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 293 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLRE--AFE 348
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P P+ + +S P ++
Sbjct: 349 NDMLAV---NTHSGYFSSLYPHHQ---------FSPFPHH------------HSYPEQEI 384
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 385 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 432
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 433 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 489
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 490 LQNLTSAEV-IVPRDQTP---DENEEVI 513
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 380 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 438
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 439 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 483
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 484 GKTVNELQNLTSAEVIVPRDQ 504
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 75/174 (43%), Gaps = 9/174 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
+F LR++ P +G +IGK G I I +++ + + + G + +T+ +
Sbjct: 191 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHA------ 244
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
T T EA + ++ + ++L +G LIGK G + ++ T
Sbjct: 245 TPEGTSEACRMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGT 304
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
I I ++L E + + G ++ +A I++M +LR + AV+T
Sbjct: 305 KITISSLQDLSIYNPE--RTITVKGTVEACANAEIEIMKKLREAFENDMLAVNT 356
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 142/301 (47%), Gaps = 37/301 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDTI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGTPEAIIQCVKQICVVMLESPPKGATIPYR 181
Query: 223 ---LASAISNSHSSSGSLVG------PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
++ + S + ++ G P T + +A P+ ++ +
Sbjct: 182 PKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPF--------TPLGQATPA 233
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
P D S + L P IG +IG+ G IN+IRQ SGA IK+ ++ + IT+
Sbjct: 234 FPGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITI 293
Query: 334 S 334
+
Sbjct: 294 T 294
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFA 75
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 76 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 122
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
EMR T A +++ + LP + + V ISG +A+IQ + ++ + + +
Sbjct: 123 KEMRESTGAQVQVA-GDMLP---NSTERAVTISG----TPEAIIQCVKQICVVMLESPPK 174
Query: 451 GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
GA + P PV +G + + + H
Sbjct: 175 GATIPYRPKPASTPVIFSGGQAYTIQGQYAIPH 207
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 99/229 (43%), Gaps = 75/229 (32%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +V
Sbjct: 9 EGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---IV 61
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 62 TITGPTDTIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV----- 100
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG+ I ++R+
Sbjct: 101 --------------------------------TLRLVVPASQCGSLIGKGGSKIKEMRES 128
Query: 313 SGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
+GA ++V D L + + T+S T EA++ +C ++I
Sbjct: 129 TGAQVQV------AGDMLPNSTERAV---TISGTPEAII----QCVKQI 164
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 51/180 (28%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ +
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCV 161
Query: 100 ---------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAE 126
A+ ++ P D L K+H + +
Sbjct: 162 KQICVVMLESPPKGATIPYRPKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQ 221
Query: 127 E-----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 222 TPFTPLGQATPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 279
>gi|383858850|ref|XP_003704912.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Megachile rotundata]
Length = 624
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 182/392 (46%), Gaps = 53/392 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y + T
Sbjct: 186 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGNPENCT 245
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + I E ++ + +S ++T K+L ++ IG +IGKGG
Sbjct: 246 NACKK-------------------ILEVMQQEANSINKGEITLKILAHNNLIGRIIGKGG 286
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + S L + ++ + G + KA I+S+L ++N
Sbjct: 287 TTIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGTIENMSKAESMISSKLRQSYEND 344
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q ++ + S + +G ++ P + G P PY G
Sbjct: 345 LQAMAPQSMMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQASLPPQQG------- 397
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P +++G +IG G+ I I + SGA++K+ + E D
Sbjct: 398 -VPATDTQETAF---LYIPNSSVGAIIGTKGSHIRNIIRFSGASVKI--APIEQDKPAEQ 451
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
+ ++ T+ + E+ + Q EK+ R+ G ++ T +LVP++++G +IG
Sbjct: 452 QTERKV---TIVGSPESQWKAQYLIFEKM-REEGFVAGTDDVRLTIEILVPSAQVGRIIG 507
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASED 418
KGG + E++R+T + I++ +++ A E+
Sbjct: 508 KGGQNVRELQRVTGSIIKLSEQQSTSPSADEE 539
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 95/210 (45%), Gaps = 12/210 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFED 341
+F LR++ +G +IG+ G+ I QI Q + A + V G + IT+ +
Sbjct: 186 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNVGSLEKAITIYGN---PE 242
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
+ + ++ + + + I + T ++L + IG +IGKGG+ I + + T
Sbjct: 243 NCTNACKKILEVMQQEANSINKG----EITLKILAHNNLIGRIIGKGGTTIKRIMQDTDT 298
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
I + ++ E ++ + G ++ A + ++LR + + A++ + P
Sbjct: 299 KITVSSINDINSFNLE--RIITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFP 356
Query: 462 YI-PVSENGSDGLNYESRDSKRHGRGP-PY 489
+ P++ + G+ Y SR +G GP PY
Sbjct: 357 GLHPMAMMSTAGMGYSSRGPGLYGSGPAPY 386
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 84/177 (47%), Gaps = 23/177 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE--ERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + P + ER VT+ +
Sbjct: 404 QETAFLYI-PNSSVGAIIGTKGSHIRNIIRFSGASVKIAPIEQDKPAEQQTERKVTIVGS 462
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ A + + +++ E D ++T ++LVPS Q+G +I
Sbjct: 463 PES-------------QWKAQYLIFEKMREEGFVAGTDD---VRLTIEILVPSAQVGRII 506
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
GKGGQ V+ ++ TG+ I+ L ++ S + + V I G V+ A +I S +
Sbjct: 507 GKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVHIIGPFFSVQSAQRRIRSMV 562
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 143/304 (47%), Gaps = 43/304 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-LA 224
R TGAQ+++ D LP+ R+ V ISG + + + QI + + S+S ++
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLEVQSKSPPRGVS 179
Query: 225 SAISNSHSSSGSLVGPTAATPIVG---------------------IAPLMGPYGGYKG-D 262
++ +S+ + A I G PL + G D
Sbjct: 180 RVVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGTD 239
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
A + RS ++ D S + L P IG +IG+ G IN+IRQ SGA IK+ ++
Sbjct: 240 RAVPFVRSPWAC--LDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-AN 296
Query: 323 STEG 326
+TEG
Sbjct: 297 ATEG 300
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 32/176 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE 168
>gi|320583120|gb|EFW97336.1| RNA binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 404
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 142/337 (42%), Gaps = 53/337 (15%)
Query: 27 RYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE 86
R T DD P +R LC I + +I+G+GGE + +++ + +++ + E + G
Sbjct: 71 RPTNDD-------PTYVHFRMLCSINETAAIVGKGGETINRIKEMSSARVNVSENLKGIP 123
Query: 87 ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
ERV+TV ++ +V+ A F + R I +E + Q+ KLL
Sbjct: 124 ERVITVRGPAE----------YVAKA----FGLITRAIMDEPFNQASTVESKQINLKLLF 169
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
P IG +IGK G + I + A ++ D+ LP+ +D ++ I+G A + A
Sbjct: 170 PHTIIGYIIGKRGARFREIEDNSAAALK-ASDQILPAS---TDRILHITGVADAIHIATY 225
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSG-----------------------SLVGPTAA 243
+A + ++ QHL + N + + + P
Sbjct: 226 YVAQTVIEH---KQHLAKAVFYNPANCNQPSTPVGGNASRMAYGNGYPPQVMQVPAPIMQ 282
Query: 244 TPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKE-FSLRLVCPVANIGGVIGKG 302
+P +G P+ PYG Y A + AP S +E + + P +IG VIGKG
Sbjct: 283 SPYMG-QPVQQPYGQYIPGAAAGAVAAPVPAPMQAQSGQEKINQDIYVPQMHIGLVIGKG 341
Query: 303 GAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
G + IR +G +KV+ + +T+ S F
Sbjct: 342 GKNLKDIRTITGCYVKVNDEVPGATERKLTLMSTSPF 378
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 140/311 (45%), Gaps = 68/311 (21%)
Query: 51 IRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFV 109
++++GSIIG+ G+ +K+ R ++ +KI I + GS ER+VTV +++
Sbjct: 1 MQEVGSIIGKKGDNIKKFREESGAKINISD---GSCPERIVTVTGSTE------------ 45
Query: 110 SPAQDALFKVHDRVI--AEELRGDEDSDGGH----QVTAKLLVPSDQIGCVIGKGGQIVQ 163
A+ K + EE+ S+G H VT +L+VP+ Q G +IGKGG ++
Sbjct: 46 -----AILKAFSLIARKFEEVSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIK 100
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
IR E A I++ E LP+ R+ V +SG A + K + QI + ++P +
Sbjct: 101 EIR-EARASIQV-ASEMLPNSTERA---VTVSGTADAITKCIYQICCVMMESPPK----- 150
Query: 224 ASAISNSHSSSGSLVG--PTAATPIVGIA-----PLMGPYGGYKGDTAGDWSRSLYSAP- 275
G+ + P A P V A + G Y D +L AP
Sbjct: 151 -----------GATIPYRPKPAMPPVIFAGGQAYTVQGQYAIPHPDLTKLHQLALQHAPL 199
Query: 276 ------------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
++ + + P IG +IGKGG+ IN+IRQ SGA IK+ +S
Sbjct: 200 LPGHSVGAINPQAAIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNSE 259
Query: 324 TEGDDCLITVS 334
D +T+S
Sbjct: 260 EGSKDRTVTIS 270
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 85/219 (38%), Gaps = 55/219 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNA--- 101
R + P + GS+IG+GG +K++R + ++ I++ E +P S ER VTV +D
Sbjct: 80 RLIVPASQCGSLIGKGGSKIKEIR-EARASIQVASEMLPNSTERAVTVSGTADAITKCIY 138
Query: 102 ----------------------------FEDGDKFVSPAQDA-----LFKVHDRVI--AE 126
F G + Q A L K+H + A
Sbjct: 139 QICCVMMESPPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYAIPHPDLTKLHQLALQHAP 198
Query: 127 ELRGDEDSDGGHQVTAKLL--------VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
L G Q +P+D IGC+IGKGG + IR +GA I+I
Sbjct: 199 LLPGHSVGAINPQAAIATASTTTTEMTIPNDLIGCIIGKGGSKINEIRQLSGATIKISNS 258
Query: 179 EHLPSCALRSDELVQISG--EASVVKKALCQIASRLHDN 215
E D V ISG EA + + L + LH N
Sbjct: 259 EE-----GSKDRTVTISGTPEAINLAQYLINTSMELHKN 292
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 27/154 (17%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G +IGK G I + R+ESGA I + S + ++TV+ + EA+++
Sbjct: 4 VGSIIGKKGDNIKKFREESGAKINISDGSC--PERIVTVT----------GSTEAILKAF 51
Query: 355 PRCSEKIERDSG----------LISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
+ K E S T RL+VP S+ G LIGKGGS I E+R +A+I+
Sbjct: 52 SLIARKFEEVSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEIRE-ARASIQ 110
Query: 405 ILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
+ E LP + + V +SG D + Q+
Sbjct: 111 VA-SEMLP---NSTERAVTVSGTADAITKCIYQI 140
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 39/74 (52%), Gaps = 9/74 (12%)
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD---LDLAK 432
+P IGC+IGKGGS I E+R+L+ A I+I E D V ISG ++LA+
Sbjct: 226 IPNDLIGCIIGKGGSKINEIRQLSGATIKISNSEE-----GSKDRTVTISGTPEAINLAQ 280
Query: 433 DALIQVMTRLRANL 446
LI L NL
Sbjct: 281 -YLINTSMELHKNL 293
>gi|410897014|ref|XP_003961994.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Takifugu rubripes]
Length = 607
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 95/406 (23%), Positives = 182/406 (44%), Gaps = 57/406 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R + P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +A
Sbjct: 200 RIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHSTPEGCSA--- 256
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
A + ++ + A E + ED + K++ ++ IG +IGK G+ ++
Sbjct: 257 -------ACRMIMEIMQKE-ANETKAMED------IPLKIIASNNYIGRLIGKQGRNLKK 302
Query: 165 IRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSRS 219
I ETG +I I L+D ++ ++ + + G A +I +L ++N +
Sbjct: 303 IEEETGTKITISSLQDLNI----YNNERTITVKGSLEACCNAEVEIMKKLREAYENDIAA 358
Query: 220 QHLLASAI-----------SNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
+ S I S++ GP + P VG A P+ G+ + +
Sbjct: 359 INQQTSLIPGLNLNALGIFSSTLPVLSPAAGPRSTMPPVGPAGY-NPFLGHSSHLSSLYG 417
Query: 269 RSLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
SA P + ++ L P +G +IGK G I Q+ +GA+IKV +
Sbjct: 418 VPPASAIPHQHAAQEQEVAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKVAPAEMPDA 477
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIG 382
+ + ++ T EA + Q R K++ ++ + T + VP++ G
Sbjct: 478 TERMVI---------ITGTPEAQFKAQGRIFGKLKEENIFTGKEEVRLETHIKVPSTAAG 528
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
+IGKGG + E++ LT A + I+P++ P +++ +V+I G
Sbjct: 529 RVIGKGGKTVNELQSLTSAEV-IVPRDQTPD--EKNEVVVKICGHF 571
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 90/196 (45%), Gaps = 25/196 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASDET 99
E V P + +G++IG+ G+ +KQL + I++ +P + ER+V
Sbjct: 432 EQEVAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKVAPAEMPDATERMV--------- 482
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGCVIGK 157
++ +A FK R+ +L+ + G +V + VPS G VIGK
Sbjct: 483 --------IITGTPEAQFKAQGRIFG-KLKEENIFTGKEEVRLETHIKVPSTAAGRVIGK 533
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG+ V ++S T A++ + +D+ + +++ +V+I G + A +I +
Sbjct: 534 GGKTVNELQSLTSAEVIVPRDQ---TPDEKNEVVVKICGHFFANQTAQRKIREIIQQVKQ 590
Query: 218 RSQ-HLLASAISNSHS 232
+ Q H +A+S HS
Sbjct: 591 QEQKHQQGAAVSPQHS 606
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 37/191 (19%), Positives = 84/191 (43%), Gaps = 13/191 (6%)
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCL 330
+ APR + + LR++ P +G +IGK G I + +++ + + + G +
Sbjct: 189 FGAPR----TTQQDLRIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKP 244
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
IT+ S + SA ++ + ++ + +++ + IG LIGK G
Sbjct: 245 ITIHST---PEGCSAACRMIMEI---MQKEANETKAMEDIPLKIIASNNYIGRLIGKQGR 298
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
+ ++ T I I ++L ++ + + G L+ +A +++M +LR +
Sbjct: 299 NLKKIEEETGTKITISSLQDLN--IYNNERTITVKGSLEACCNAEVEIMKKLREAYENDI 356
Query: 451 GAVSTFVPVLP 461
A++ ++P
Sbjct: 357 AAINQQTSLIP 367
>gi|363808250|ref|NP_001242748.1| uncharacterized protein LOC100819415 [Glycine max]
gi|255637181|gb|ACU18921.1| unknown [Glycine max]
Length = 318
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A E+ D + PA D L +VH +V+ + D S G V +LLV Q G +IGK
Sbjct: 2 VSAKEEPDCSIPPAVDVLLRVHKQVVNVDPHPADSASGAGRPVVTRLLVADTQAGSLIGK 61
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
G +++ + TG IRIL EHLP ALR D +V+I GE+S V KA+ +A L
Sbjct: 62 QGSTIKSFQDATGCNIRILGSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHL 116
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 44/83 (53%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
TRLLV ++ G LIGK GS I + T NIRIL E+LP A DD +V+I G+
Sbjct: 45 VTRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSVVEIQGESSG 104
Query: 431 AKDALIQVMTRLRANLFDREGAV 453
A+ V LR L DR V
Sbjct: 105 VHKAVELVAIHLRKFLVDRSIVV 127
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 142/326 (43%), Gaps = 64/326 (19%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
++ GSIIG+ G+ VK+ R D+ +KI I ++ ER+VTV +D+ F+
Sbjct: 11 KEAGSIIGKKGDNVKKFREDSGAKINISDS--SCPERIVTVTGTTDQI--FKAFTMICKK 66
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
++ + H+ + VT +L+VP+ Q G +IGKGG ++ IR TGA
Sbjct: 67 FEEDIVNTHNSTTLPK----------PPVTLRLIVPASQCGSLIGKGGAKIKEIRELTGA 116
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ----------- 220
I++ E LP+ R+ V +SG+A + + + I + ++P +
Sbjct: 117 SIQV-ASEMLPNSTERA---VTVSGQADAITQCIYNICCVMLESPPKGATIPYRPKPCVP 172
Query: 221 --HLLASAISNSHSSSGSLV-----GPTAATPIVG--IAPLMGPY--------------- 256
L +S + S G + P A P V PL P
Sbjct: 173 PVMLPSSCGGQAFSIQGQQILLPPSHPNATQPDVSPHCVPLPPPCFISLRARLQTHSLIC 232
Query: 257 ----GGYKGDTAGDWSRSLYSAPRD-----DLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
Y G A + APR ++S++ + + P IG +IG+GGA IN
Sbjct: 233 IIIRDVYPGMNAAMAAGIPQFAPRQAGPGANMSAQTHEMTI--PNDLIGCIIGRGGAKIN 290
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITV 333
+IRQ SGA IK+ ++ D +T+
Sbjct: 291 EIRQLSGATIKIANADEGSSDRKVTI 316
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 25/186 (13%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LR++ G +IGK G + + R++SGA I + SS +T ++ + F+
Sbjct: 2 VTLRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISDSSCPERIVTVTGTTDQIFK--- 58
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISF-----TTRLLVPTSRIGCLIGKGGSIITEMRRL 398
A + + E I + T RL+VP S+ G LIGKGG+ I E+R L
Sbjct: 59 -----AFTMICKKFEEDIVNTHNSTTLPKPPVTLRLIVPASQCGSLIGKGGAKIKEIREL 113
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
T A+I++ E LP + + V +SG DA+ Q + + + + +T
Sbjct: 114 TGASIQVA-SEMLP---NSTERAVTVSGQ----ADAITQCIYNICCVMLESPPKGAT--- 162
Query: 459 VLPYIP 464
+PY P
Sbjct: 163 -IPYRP 167
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VTV +D
Sbjct: 87 LRLIVPASQCGSLIGKGGAKIKEIRELTGASIQVASEMLPNSTERAVTVSGQAD 140
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDELVQISGEAS 199
T ++ +P+D IGC+IG+GG + IR +GA I+I DE SD V I G
Sbjct: 268 THEMTIPNDLIGCIIGRGGAKINEIRQLSGATIKIANADEG------SSDRKVTIMGSLE 321
Query: 200 VVKKALCQIASR 211
+ A I +R
Sbjct: 322 TIHAAQYMINAR 333
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
LI + ++ + +A + + PR + + + + T + +P IGC+IG+GG
Sbjct: 230 LICIIIRDVYPGMNAAMAAGIPQFAPR---QAGPGANMSAQTHEMTIPNDLIGCIIGRGG 286
Query: 390 SIITEMRRLTKANIRILPKENLPKIASED----DEMVQISGDLDLAKDALIQVMTR 441
+ I E+R+L+ A I KIA+ D D V I G L+ A + R
Sbjct: 287 AKINEIRQLSGATI---------KIANADEGSSDRKVTIMGSLETIHAAQYMINAR 333
>gi|115482006|ref|NP_001064596.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|78708635|gb|ABB47610.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639205|dbj|BAF26510.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|215693240|dbj|BAG88622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612825|gb|EEE50957.1| hypothetical protein OsJ_31513 [Oryza sativa Japonica Group]
Length = 586
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 97/183 (53%), Gaps = 13/183 (7%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
G++RD P +V+R L P K+G++IG GE +++L +TK+ +R+ + ER
Sbjct: 48 GENRDPG--WPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERA 105
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSD 149
V ++ A E D+ PA DAL +V++ +I ++ D + V A++L PS+
Sbjct: 106 VIIF-------AKEQPDEPKPPAIDALLRVYECIINDD---GLDVRYNNIVVARILTPSE 155
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA 209
Q +IG G ++ I+ + I ++ D LP AL D +++I G + V +AL +A
Sbjct: 156 QAASLIGDQGSVINYIKKASKTNIHVI-DGDLPPVALEDDMIIEIWGLPARVHQALELVA 214
Query: 210 SRL 212
L
Sbjct: 215 CHL 217
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 94/195 (48%), Gaps = 12/195 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ P +G VIG G + ++ +E+ A ++V + + + +KE ++
Sbjct: 61 FRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKPP 120
Query: 346 TIEAVVRLQPRCSEKIERDSGL-ISFTT----RLLVPTSRIGCLIGKGGSIITEMRRLTK 400
I+A++R+ E I D GL + + R+L P+ + LIG GS+I +++ +K
Sbjct: 121 AIDALLRVY----ECIINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASK 176
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVL 460
NI ++ +LP +A EDD +++I G AL V LR L R + F P +
Sbjct: 177 TNIHVI-DGDLPPVALEDDMIIEIWGLPARVHQALELVACHLRKYLVHR-SVIPLFDPHV 234
Query: 461 PYIPVSENGSDGLNY 475
IP+S +Y
Sbjct: 235 -SIPISPVDMPPFHY 248
>gi|355560757|gb|EHH17443.1| hypothetical protein EGK_13854 [Macaca mulatta]
gi|355747773|gb|EHH52270.1| hypothetical protein EGM_12689 [Macaca fascicularis]
Length = 583
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 95/421 (22%), Positives = 196/421 (46%), Gaps = 65/421 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 I--ITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL-----DLAKDALIQVMTRL 442
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T++
Sbjct: 509 TAKVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQAKVAQRKIQEILTQV 564
Query: 443 R 443
+
Sbjct: 565 K 565
>gi|348582424|ref|XP_003476976.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Cavia porcellus]
Length = 532
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 184/413 (44%), Gaps = 54/413 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 126 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 185
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 186 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 227
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 228 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGAVEACASAEVEIMKKLREAFEND 285
Query: 217 SRSQHLLASAISNSHSSS--------GSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
+ H A+ I + S+ L P AP P+ + G + +
Sbjct: 286 MLAVHQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPTAPYH-PFATHSGYFSSLYP 344
Query: 269 RSLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG
Sbjct: 345 HHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGP 402
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIG 382
D VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 403 D----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAG 455
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 456 RVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 504
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 358 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 416
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 417 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 461
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 462 GKTVNELQNLTSAEVIVPRDQ 482
>gi|413935392|gb|AFW69943.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 397
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 141/302 (46%), Gaps = 36/302 (11%)
Query: 31 DDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP---GSEE 87
D R ++ P +V+R + P K+G IIGR G+ +K+L +T++++R+ + P G+
Sbjct: 86 DARPRWPGWPGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDA-PHGDGAFS 144
Query: 88 RVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA----- 142
R+V V SA +E A +SPA +A K+ + E D +SDG A
Sbjct: 145 RIVLV-SAREEVEAE------LSPAMNAAIKIFKHINEIE---DINSDGTLMAPAPEISS 194
Query: 143 -KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
+LLVP Q VIGK G +++I+ TG+ +RI+ ++ L S + +V+I+G + V
Sbjct: 195 VRLLVPFAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEINGASLEV 254
Query: 202 KKALCQIASRLHDNPSRS--QHLLASAISNSHSSSGSLVGPTAATPIVGIAP-LMGPYGG 258
AL + L HL S P + + G P PY
Sbjct: 255 LNALKLVLGLLRKFLVDHGVLHLFERKNPEVAQPQQSRGNPKGSRFLYGHDPSFHAPY-- 312
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
SR L S P D L +K + + P+A++G +IG G + IR SGA +
Sbjct: 313 ---------SRDL-SQPADSLITK-ITRTMQIPLADVGEIIGVRGENVELIRSVSGAVVV 361
Query: 319 VD 320
++
Sbjct: 362 LE 363
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 12/181 (6%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC---LITVSSKEFFEDT 342
RLV P +GG+IG+ G I ++ E+ A ++V + GD ++ VS++E E
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRV-LDAPHGDGAFSRIVLVSAREEVEAE 158
Query: 343 LSATIEAVVRLQPRCSE--KIERDSGLIS-----FTTRLLVPTSRIGCLIGKGGSIITEM 395
LS + A +++ +E I D L++ + RLLVP ++ +IGK G I +
Sbjct: 159 LSPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSI 218
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
+ T + +RI+ ++ L + + +V+I+G +AL V+ LR L D G +
Sbjct: 219 QESTGSTVRIMDEDELLSHETMGERIVEINGASLEVLNALKLVLGLLRKFLVDH-GVLHL 277
Query: 456 F 456
F
Sbjct: 278 F 278
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/301 (27%), Positives = 142/301 (47%), Gaps = 37/301 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDTI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGTPEAIIQCVKQICVVMLESPPKGATIPYR 181
Query: 223 ---LASAISNSHSSSGSLVG------PTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
++ + S + ++ G P T + +A P+ G T +
Sbjct: 182 PKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPL-GQTTPAF------ 234
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
P D + + L P IG +IG+ G IN+IRQ SGA IK+ ++ + IT+
Sbjct: 235 -PGLDAAPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITI 293
Query: 334 S 334
+
Sbjct: 294 T 294
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 75/231 (32%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 60 IVTITGPTDTIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV--- 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
+ +GA ++V D L + + T+S T EA++ +C ++I
Sbjct: 127 ESTGAQVQV------AGDMLPNSTERAV---TISGTPEAII----QCVKQI 164
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFA 75
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 76 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 122
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
EMR T A +++ + LP + + V ISG +A+IQ + ++ + + +
Sbjct: 123 KEMRESTGAQVQVA-GDMLP---NSTERAVTISG----TPEAIIQCVKQICVVMLESPPK 174
Query: 451 GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
GA + P PV +G + + + H
Sbjct: 175 GATIPYRPKPASTPVIFSGGQAYTIQGQYAIPH 207
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 74/178 (41%), Gaps = 47/178 (26%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ +
Sbjct: 102 LRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAGDMLPNSTERAVTISGTPEAIIQCV 161
Query: 100 ---------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAE 126
A+ ++ P D L K+H + +
Sbjct: 162 KQICVVMLESPPKGATIPYRPKPASTPVIFSGGQAYTIQGQYAIPHPDQLTKLHQLAMQQ 221
Query: 127 E----LRGDEDSDGGHQV-----TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
L + G T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 222 TPFTPLGQTTPAFPGLDAAPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 279
>gi|328723971|ref|XP_003247997.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 559
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/429 (25%), Positives = 187/429 (43%), Gaps = 73/429 (17%)
Query: 38 IGPEDTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI--GETVPGSEERVVTVY 93
IG T + R L +G+IIGRGG ++Q+ T++++ + + V GS E+ +T+Y
Sbjct: 141 IGNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNV-GSLEKAITIY 199
Query: 94 SASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIG 152
+ TNA R I E ++ + + V K+L ++ IG
Sbjct: 200 GNPENCTNAC-------------------RKILEVMQQEATNTNKSDVILKILAHNNLIG 240
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+IGK G ++ I SET +I + + S + ++ + G + KA QI+++L
Sbjct: 241 RIIGKEGNTIKRIMSETETKITVSSINDINS--FNYERIITVKGSIENMSKAEAQISAKL 298
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRS-- 270
+ ++ L S + G + P A GI Y G G T+
Sbjct: 299 RQS---FENDLQSMAPQTVMFPG--LHPMAMMSATGIT-----YPGRGGPTSYQQFAPAP 348
Query: 271 -----------LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ A D+ F L P + +G +IG G+ I + + SGA++KV
Sbjct: 349 YPPMYPSTIPPINPALAADVQETAF---LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKV 405
Query: 320 DSSSTE--------GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS-- 369
S+ E GD +S++ T+ T ++ + Q +K+ RD G +
Sbjct: 406 ASTENEKQGVVGNAGDANSAQQASRKV---TIVGTADSQWKAQGMIFDKL-RDEGFVPNN 461
Query: 370 ----FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
T +LVP+S++G +IG+GGS + E++R+T + I+ LP + +ED V I
Sbjct: 462 EEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIK-LPTQGSTD-GTEDTTTVHII 519
Query: 426 GDLDLAKDA 434
G + A
Sbjct: 520 GHFLATQSA 528
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFED 341
EF LR++ +G +IG+GG+ I QI Q++ A + V G + IT+ E+
Sbjct: 147 EFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNP--EN 204
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
+A + + +Q + + D L ++L + IG +IGK G+ I + T+
Sbjct: 205 CTNACRKILEVMQQEATNTNKSDVIL-----KILAHNNLIGRIIGKEGNTIKRIMSETET 259
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
I + ++ E ++ + G ++ A Q+ +LR + + +++ + P
Sbjct: 260 KITVSSINDINSFNYE--RIITVKGSIENMSKAEAQISAKLRQSFENDLQSMAPQTVMFP 317
Query: 462 YI-PVSENGSDGLNYESR 478
+ P++ + G+ Y R
Sbjct: 318 GLHPMAMMSATGITYPGR 335
>gi|395839829|ref|XP_003792778.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Otolemur garnettii]
Length = 575
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 176/392 (44%), Gaps = 59/392 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 191 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 250
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 251 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 292
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 293 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLRE--AFE 348
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGI----APLMGPYGGYKGDTAGDWSRSLYSAP 275
+LA + +L+ P +GI ++ P G +G P
Sbjct: 349 NDMLAV------NQQANLI-PGLNLSALGIFSTGLSVLPPPSGPRGAPPAAPYHPFAQYP 401
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS
Sbjct: 402 EQEI------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSE 449
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
+ ++ EA + Q R K++ ++ + + VP+S G +IGKGG
Sbjct: 450 RMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGK 506
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + I+P++ P E++E++
Sbjct: 507 TVNELQNLTSAEV-IVPRDQTP---DENEEVI 534
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 401 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 459
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 460 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 504
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 505 GKTVNELQNLTSAEVIVPRDQ 525
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 188/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 414 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 473
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 474 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 515
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 516 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 573
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G + +
Sbjct: 574 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPP 633
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+S P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 634 HQFSPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 691
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 692 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 744
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 745 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 792
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 646 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 704
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 705 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 749
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 750 GKTVNELQNLTSAEVIVPRDQ 770
>gi|321455006|gb|EFX66153.1| hypothetical protein DAPPUDRAFT_2216 [Daphnia pulex]
Length = 388
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 109/437 (24%), Positives = 198/437 (45%), Gaps = 79/437 (18%)
Query: 39 GPE---DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI--GETVPGSEERVVTVY 93
GP+ D R L +G+IIGR G ++Q+ T++++ + E V GS E+ +T+Y
Sbjct: 4 GPQRQPDFPLRVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHRKENV-GSLEKAITIY 62
Query: 94 SASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIG 152
+ TNA R + E ++ + D+ +++ K+L ++ IG
Sbjct: 63 GNPENCTNAC-------------------RRVLEVMQQEADNTNKGEISLKILAHNNLIG 103
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+IGKGG ++ + ET +I + + S + + ++ I G
Sbjct: 104 RIIGKGGSTIKRVMLETETKITVSSLNDVSSFNM--ERVITIKGTI-------------- 147
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL-------MGPYGGYKGDTAG 265
DN SR++ ++++ + S+ S + P + G+ P+ MG +G T
Sbjct: 148 -DNMSRAEGMISAKLRQSYESDLQAMAPQSMM-FPGLHPMAMMSTVGMGFSPSVRG-TPP 204
Query: 266 DWSRSLY---SAPRDDLSSK---EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ +Y +AP E S L P + +G +IG G+ I I + SGA++K+
Sbjct: 205 AAAPGMYPPGAAPYAQAGPAGVGETSF-LYIPNSAVGAIIGTRGSHIRNIIRFSGASVKI 263
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL------ISFTTR 373
+S EG T + + T+ T EA + Q EK+ R+ G + T
Sbjct: 264 -TSLPEGT----TAEPQAERKVTIVGTPEAQWKAQYLIFEKM-REEGFMPAGEDVRLTVE 317
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
LLV +S++G +IGKGG + EM+R T + I+ LP++ ++ ++ V I G+ +
Sbjct: 318 LLVASSQVGRIIGKGGQNVREMQRTTSSVIK-LPEQGA---STGEETTVHIIGNFFAVQS 373
Query: 434 ALIQVMTRLRANLFDRE 450
A R+RA + ++
Sbjct: 374 A----QRRIRAMMSQQQ 386
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 171/391 (43%), Gaps = 87/391 (22%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDE 98
+ + L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V +++
Sbjct: 33 ELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAE- 91
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELR----GDEDSDGG----HQVT--------A 142
AL VH+ IAE++R G +D G Q T A
Sbjct: 92 ----------------ALLSVHN-FIAEKVREVPQGAPKNDLGVLLPPQSTINAERAKQA 134
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
KL+VP+ G +IGKGG V+NI E+GA +++ + P+ + + +V +SGE S V+
Sbjct: 135 KLIVPNTTAGLIIGKGGATVRNIMEESGAWVQLSQK---PAGSNLHERVVTVSGEPSQVQ 191
Query: 203 KALCQIASRLHDNPSR-SQHLLASAISN-----SHSSSGSLVGPTAATPIVGIAPLMGPY 256
KA+ I + ++P + + HL S I+ + + +GS AA P+ + P
Sbjct: 192 KAIHSIIHKSREDPPQGTTHLNISYINTQGPVANSNPTGSPYAGGAAEPV--LTPFQPAP 249
Query: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRL-VCPVANIGGVIGKGGAIINQIRQESGA 315
+ GD SA + L+S +S + P+ +GGV ++ E+G
Sbjct: 250 PAPPAISGGDLLA--ISAALNTLASYGYSTGMGYNPL--VGGVHPAAVNLLASYTGEAGP 305
Query: 316 AIKVDSSSTEGDDC-LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL 374
++ + + +V+ KE E +
Sbjct: 306 SLGLGGGGILLEKMGAESVTGKETLE---------------------------------M 332
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
VP + +G ++GKGG + E + LT A I+I
Sbjct: 333 AVPETLVGAILGKGGKTLVEYQELTGARIQI 363
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 85/178 (47%), Gaps = 25/178 (14%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ S++
Sbjct: 33 ELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAEA 92
Query: 338 FF--EDTLSATIEAV----------VRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
+ ++ + V V L P+ + ER + +L+VP + G +I
Sbjct: 93 LLSVHNFIAEKVREVPQGAPKNDLGVLLPPQSTINAER-----AKQAKLIVPNTTAGLII 147
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
GKGG+ + + + A +++ K P ++ + +V +SG+ + A+ ++ + R
Sbjct: 148 GKGGATVRNIMEESGAWVQLSQK---PAGSNLHERVVTVSGEPSQVQKAIHSIIHKSR 202
>gi|47222225|emb|CAG11104.1| unnamed protein product [Tetraodon nigroviridis]
Length = 580
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 99/440 (22%), Positives = 191/440 (43%), Gaps = 68/440 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G+ ++ L T SKI I + G+ E+ +T++S + ++
Sbjct: 166 DIPLRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPEGSS 225
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+A + D + E + D+ ++ K+LV ++ +G +IGK G+
Sbjct: 226 -------------NACRTIMDIMQKEAI----DTKFTEEIPLKILVHNNFVGRLIGKEGR 268
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
++ I +TG +I I L+D L + + + G +A ++ ++ +++
Sbjct: 269 NLKKIEQDTGTKITISSLQDLTL----YNPERTITVKGSIEACGRAEEEVMKKIREAYES 324
Query: 216 PSRSQHLLASAISNSHSSSGSLV--GPTAATPIVGIAPLMGPYGGYK------GDTAGDW 267
+ +L ++ I + ++ L G P + P G +GG G W
Sbjct: 325 DVAAMNLQSNLIPGLNLNALGLFPSGSPGMGPSMSSVPPPGAHGGCSFGCSPYGVEGPLW 384
Query: 268 SRSLYSAPRDDL--SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
+ S+ SA L S + ++ L P +G +IGK G I Q+ +GA+IK +
Sbjct: 385 A-SMMSASGQTLAGSPESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKASRKGMD 443
Query: 326 GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSR 380
++ + EA + Q R K++ ++ + + VP+
Sbjct: 444 PKHRMVIIVGPP----------EAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPSFA 493
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
G +IGKGG + E++ LT A + ++P++ P +D +V+I G + +
Sbjct: 494 AGRVIGKGGKTVNELQNLTCAEV-VVPRDQTPD--EKDQVIVKIIGHFFACQVS------ 544
Query: 441 RLRANLFDREGAVSTFVPVL 460
F R GAV F+ +
Sbjct: 545 ------FYRRGAVFCFICIF 558
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 24/144 (16%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
PE P +G+IIG+ G+ +KQL + I+ + R+V +
Sbjct: 399 PESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKASRKGMDPKHRMVII------- 451
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
V P +A FK R+ E G ++ ++ A + VPS G VI
Sbjct: 452 ---------VGPP-EAQFKAQCRIFGKLKEENFFGPKEEV---KLEAHIKVPSFAAGRVI 498
Query: 156 GKGGQIVQNIRSETGAQIRILKDE 179
GKGG+ V +++ T A++ + +D+
Sbjct: 499 GKGGKTVNELQNLTCAEVVVPRDQ 522
>gi|198465289|ref|XP_001353580.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
gi|198150092|gb|EAL31093.2| GA20351 [Drosophila pseudoobscura pseudoobscura]
Length = 330
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 130/282 (46%), Gaps = 55/282 (19%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DAGKIGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA---------SRLHDNPSRSQH 221
I++ E LP+ R+ V +SG A + + + QI S + NP S
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESCPRSTVAKNPLASLA 193
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
L A N S+ G + TAA +A L AG R+ +A R
Sbjct: 194 ALGLAGMNPASTGG--INHTAA-----LAAL-----------AGSQLRTANAANRAQQQQ 235
Query: 282 KEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
E + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 236 HEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 271
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D+G I T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDAGKIGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 128/348 (36%), Gaps = 106/348 (30%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ A I +
Sbjct: 77 AIFSAFTLITKKFE---------------------------------------------- 90
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+W A + + + +RL+ P + G +IGK G+ I +IRQ +G +I+V
Sbjct: 91 ------EWCSQFNDAGK--IGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV 142
Query: 320 DS----SSTE------GDDCLITVSSKEFFEDTLSATIEAVV--------------RLQP 355
S +STE G IT + L + + V + P
Sbjct: 143 ASEMLPNSTERAVTLSGSAEQITQCIYQICLVMLESCPRSTVAKNPLASLAALGLAGMNP 202
Query: 356 RCSEKIERDSGLISFT-----------------TRLLVPTSRIGCLIGKGGSIITEMRRL 398
+ I + L + + V IGC+IGKGG+ I E+R++
Sbjct: 203 ASTGGINHTAALAALAGSQLRTANAANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQI 262
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
+ A IRI E + D + ISG+ D AL Q + +R ++
Sbjct: 263 SGAMIRISNCEE--REGGNTDRTITISGNPDSV--ALAQYLINMRISM 306
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 74/174 (42%), Gaps = 32/174 (18%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
IG R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 102 IGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 97 DETN---------AFEDGDK-----------------FVSPAQDALFKVHDRVIA----E 126
++ E + ++PA H +A
Sbjct: 162 EQITQCIYQICLVMLESCPRSTVAKNPLASLAALGLAGMNPASTGGIN-HTAALAALAGS 220
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI E
Sbjct: 221 QLRTANAANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE 274
>gi|328723977|ref|XP_001952825.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Acyrthosiphon pisum]
Length = 563
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 107/428 (25%), Positives = 186/428 (43%), Gaps = 71/428 (16%)
Query: 38 IGPEDTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYS 94
IG T + R L +G+IIGRGG ++Q+ T++++ + + GS E+ +T+Y
Sbjct: 141 IGNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYG 200
Query: 95 ASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ TNA R I E ++ + + V K+L ++ IG
Sbjct: 201 NPENCTNAC-------------------RKILEVMQQEATNTNKSDVILKILAHNNLIGR 241
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+IGK G ++ I SET +I + + S + ++ + G + KA QI+++L
Sbjct: 242 IIGKEGNTIKRIMSETETKITVSSINDINS--FNYERIITVKGSIENMSKAEAQISAKLR 299
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRS--- 270
+ ++ L S + G + P A GI Y G G T+
Sbjct: 300 QS---FENDLQSMAPQTVMFPG--LHPMAMMSATGIT-----YPGRGGPTSYQQFAPAPY 349
Query: 271 ----------LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
+ A D+ F L P + +G +IG G+ I + + SGA++KV
Sbjct: 350 PPMYPSTIPPINPALAADVQETAF---LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKVA 406
Query: 321 SSSTE--------GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS--- 369
S+ E GD +S++ T+ T ++ + Q +K+ RD G +
Sbjct: 407 STENEKQGVVGNAGDANSAQQASRKV---TIVGTADSQWKAQGMIFDKL-RDEGFVPNNE 462
Query: 370 ---FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
T +LVP+S++G +IG+GGS + E++R+T + I+ LP + +ED V I G
Sbjct: 463 EVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIK-LPTQGSTD-GTEDTTTVHIIG 520
Query: 427 DLDLAKDA 434
+ A
Sbjct: 521 HFLATQSA 528
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 90/198 (45%), Gaps = 11/198 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFED 341
EF LR++ +G +IG+GG+ I QI Q++ A + V G + IT+ E+
Sbjct: 147 EFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNP--EN 204
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
+A + + +Q + + D L ++L + IG +IGK G+ I + T+
Sbjct: 205 CTNACRKILEVMQQEATNTNKSDVIL-----KILAHNNLIGRIIGKEGNTIKRIMSETET 259
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
I + ++ E ++ + G ++ A Q+ +LR + + +++ + P
Sbjct: 260 KITVSSINDINSFNYE--RIITVKGSIENMSKAEAQISAKLRQSFENDLQSMAPQTVMFP 317
Query: 462 YI-PVSENGSDGLNYESR 478
+ P++ + G+ Y R
Sbjct: 318 GLHPMAMMSATGITYPGR 335
>gi|328723973|ref|XP_003247998.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 3 [Acyrthosiphon pisum]
gi|328723975|ref|XP_003247999.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 4 [Acyrthosiphon pisum]
Length = 553
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 186/429 (43%), Gaps = 79/429 (18%)
Query: 38 IGPEDTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI--GETVPGSEERVVTVY 93
IG T + R L +G+IIGRGG ++Q+ T++++ + + V GS E+ +T+Y
Sbjct: 141 IGNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNV-GSLEKAITIY 199
Query: 94 SASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIG 152
+ TNA R I E ++ + + V K+L ++ IG
Sbjct: 200 GNPENCTNAC-------------------RKILEVMQQEATNTNKSDVILKILAHNNLIG 240
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+IGK G ++ I SET +I + + + ++ + G + KA QI+++L
Sbjct: 241 RIIGKEGNTIKRIMSETETKITV--------SSFNYERIITVKGSIENMSKAEAQISAKL 292
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRS-- 270
+ ++ L S + G + P A GI Y G G T+
Sbjct: 293 RQS---FENDLQSMAPQTVMFPG--LHPMAMMSATGIT-----YPGRGGPTSYQQFAPAP 342
Query: 271 -----------LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ A D+ F L P + +G +IG G+ I + + SGA++KV
Sbjct: 343 YPPMYPSTIPPINPALAADVQETAF---LFIPNSAVGAIIGTKGSNIRSMIRFSGASVKV 399
Query: 320 DSSSTE--------GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS-- 369
S+ E GD +S++ T+ T ++ + Q +K+ RD G +
Sbjct: 400 ASTENEKQGVVGNAGDANSAQQASRKV---TIVGTADSQWKAQGMIFDKL-RDEGFVPNN 455
Query: 370 ----FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
T +LVP+S++G +IG+GGS + E++R+T + I+ LP + +ED V I
Sbjct: 456 EEVRLTVEILVPSSQVGRIIGRGGSNVRELQRVTGSIIK-LPTQGSTD-GTEDTTTVHII 513
Query: 426 GDLDLAKDA 434
G + A
Sbjct: 514 GHFLATQSA 522
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 89/198 (44%), Gaps = 17/198 (8%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFED 341
EF LR++ +G +IG+GG+ I QI Q++ A + V G + IT+ E+
Sbjct: 147 EFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNP--EN 204
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
+A + + +Q + + D L ++L + IG +IGK G+ I + T+
Sbjct: 205 CTNACRKILEVMQQEATNTNKSDVIL-----KILAHNNLIGRIIGKEGNTIKRIMSETET 259
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
I + + + ++ + G ++ A Q+ +LR + + +++ + P
Sbjct: 260 KITVS--------SFNYERIITVKGSIENMSKAEAQISAKLRQSFENDLQSMAPQTVMFP 311
Query: 462 YI-PVSENGSDGLNYESR 478
+ P++ + G+ Y R
Sbjct: 312 GLHPMAMMSATGITYPGR 329
>gi|18858571|ref|NP_571566.1| insulin-like growth factor 2 mRNA-binding protein 3 [Danio rerio]
gi|82248267|sp|Q9PW80.1|IF2B3_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=Decapentaplegic and Vg-related 1 RNA-binding
protein; AltName: Full=IGF-II mRNA-binding protein 3;
AltName: Full=VICKZ family member 3; AltName: Full=Vg1
RNA-binding protein; Short=Vg1-RBP
gi|5596632|gb|AAD45610.1|AF161270_1 Vg1 RNA binding protein [Danio rerio]
gi|28278436|gb|AAH45873.1| Insulin-like growth factor 2 mRNA binding protein 3 [Danio rerio]
gi|182889884|gb|AAI65768.1| Igf2bp3 protein [Danio rerio]
Length = 582
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 189/421 (44%), Gaps = 69/421 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T SKI I + G+ E+ +TV+S + +
Sbjct: 194 DVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHSTPEGCS 253
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDE-DSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ R I E ++ + D+ ++ K+L ++ +G +IGK G
Sbjct: 254 S------------------ACRNIMEIMQKEAIDTKITEEIPLKILAHNNFVGRLIGKEG 295
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 296 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGTLDACAKAEEEIMKKVRESYE 351
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAAT----PIVGIAPLMGPYGGYKGDTAGDWSRS 270
N + HL ++ I + ++ L P AA+ P V P G GY+ A S +
Sbjct: 352 NDVAAMHLQSNLIPGLNLNALGLF-PGAASGGISPSVVSGPPPGAQAGYQSFGAQMESET 410
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
++ L P +G +IGK G I Q+ + +GA+IK+ + +G D
Sbjct: 411 VH---------------LFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APADGIDAK 453
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLI 385
+ +S EA + Q R K++ ++ + + VP+ G +I
Sbjct: 454 QRMV-------IISGPPEAQFKAQGRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVI 506
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL---DLAKDALIQVMTRL 442
GKGG + E++ LT A + ++P++ P D +V+I+G LA+ + ++++++
Sbjct: 507 GKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHFYASQLAQRKIQEIISQV 563
Query: 443 R 443
R
Sbjct: 564 R 564
>gi|26353480|dbj|BAC40370.1| unnamed protein product [Mus musculus]
Length = 579
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 198/422 (46%), Gaps = 67/422 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP---LMGPYGGYKGDTAGDWSRSLY 272
S +L A+ I + ++ L PT+ P P L PY
Sbjct: 354 DIASMNLQANLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY---------------- 397
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D +
Sbjct: 398 --PQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVR 452
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ ++ EA + Q R KI+ ++ + + + VP+ G +IGK
Sbjct: 453 MV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGK 505
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
GG + E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 506 GGKTVNELQSLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 561
Query: 444 AN 445
+
Sbjct: 562 QH 563
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 48/189 (25%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 399 QFEQSETETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 457
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H RV
Sbjct: 458 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRV----------------------- 494
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE----LVQISGEASVVK 202
PS G VIGKGG+ V ++S + A++ + +D+ DE +V+I+G
Sbjct: 495 PSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQ-------TPDENDQVVVKITGHFYA-- 545
Query: 203 KALCQIASR 211
CQ+A R
Sbjct: 546 ---CQVAQR 551
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 185/420 (44%), Gaps = 65/420 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 197 DFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 256
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A + D + E + D+ + K+L + +G +IGK G+
Sbjct: 257 T-------------ACHMIMDIMQKEAV----DTKVTEDIPLKILAHNSLVGRLIGKEGR 299
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-- 218
++ I +T +I I + L + + + G +A +I +L +
Sbjct: 300 NLKKIEEDTETKITISSLQDL--TIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDV 357
Query: 219 ----SQHLLASAISNSH---SSSGSLVGPTAATPIVGIAPL----MGPYGGYKGDTAGDW 267
Q L +S S S+G V P AA P GI P+ P+ G+ G
Sbjct: 358 AAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGP-RGIPPVPPTGYNPFLGHSSQLGG-- 414
Query: 268 SRSLYSAP-------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
LY P + + ++ + L P +G +IGK G I Q+ + +GA+IK+
Sbjct: 415 ---LYGVPPASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI- 470
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLL 375
+ E D V+ + ++ EA + Q R K++ ++ + T +
Sbjct: 471 -APAESPD----VTQRMVI---ITGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIK 522
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
VP+S G +IGKGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 523 VPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 578
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVY 93
Q PE V P + +G+IIG+ G+ +KQL + I+I P +R+V +
Sbjct: 427 QHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMV-II 485
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ E G F ++ F + V ++ + VPS G
Sbjct: 486 TGPPEAQFKAQGRIFGKLKEENFFTAKEEV---------------KLETHIKVPSSAAGR 530
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDE 179
VIGKGG+ V +++ T A++ + +D+
Sbjct: 531 VIGKGGKTVNELQNLTSAEVIVPRDQ 556
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 147/320 (45%), Gaps = 55/320 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 92 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 143
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 144 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 198
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 199 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 254
Query: 219 ----SQHLLAS-----------AISNSHSSSGSLVGPTAATPIVGIAPL------MGPYG 257
S ++ + AI + + L P+A + + L P G
Sbjct: 255 PKPASTPVIFAGGQAYTIQGQYAIPHPDPLAHGLYQPSAILQLTKLHQLAMQQTPFPPLG 314
Query: 258 ----GYKGD-----TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
+ G+ ++ + + +P D S + L P IG +IG+ G IN+
Sbjct: 315 QTNPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKINE 374
Query: 309 IRQESGAAIKVDSSSTEGDD 328
IRQ SGA IK+ +++TEG
Sbjct: 375 IRQMSGAQIKI-ANATEGSS 393
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 81 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 133
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 134 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 173
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 174 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 200
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 201 STGAQVQV 208
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 105/253 (41%), Gaps = 39/253 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 89 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 148
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 149 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 195
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 196 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 247
Query: 451 GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYGSSDLAAGDSYGSYGSSQ 510
GA + P PV G + + + H +G Y S + Q
Sbjct: 248 GATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDPLAHGLYQPSAILQLTKLHQLAMQQ 307
Query: 511 -----LGGTGSAY 518
LG T A+
Sbjct: 308 TPFPPLGQTNPAF 320
>gi|189194345|ref|XP_001933511.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187979075|gb|EDU45701.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 434
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 131/299 (43%), Gaps = 34/299 (11%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQD 114
+IIG+GGE V Q+R + +K + + G+ ER++TV D A
Sbjct: 138 ATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVD--------------AVS 183
Query: 115 ALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIR 174
F + R + +E + +LL+P IG +IGK G ++ I+ + A++
Sbjct: 184 KAFGLIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLN 243
Query: 175 ILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------PSRSQHLLASAI 227
D LP+ RS + + G A V A+ +A L + P+ SQ+ S +
Sbjct: 244 -ASDTLLPNSGERS---LIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGM 299
Query: 228 SNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT---------AGDWSRSLYSAPRDD 278
+ + G V P P +P GPYGG T + A
Sbjct: 300 AANVVPGGMSVQPYVPQPAGAGSPSRGPYGGPAAPTPYGAHPAAAPVAHGGAAPHAAVGA 359
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+ + + ++ P +G +IGKGGA IN+IRQ SG+ IK++ + ++ L+T++ +
Sbjct: 360 MPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQ 418
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 3/106 (2%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG + QIR+ SGA V S + ++TVS + D +S +VR +
Sbjct: 140 IIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQV---DAVSKAFGLIVRTLNQE 196
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ S ++ RLL+P IG +IGK G I E++ + A +
Sbjct: 197 DLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKL 242
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI-LPKENLPKIASEDDEMVQISGDL 428
T ++ +P +G +IGKGG+ I E+R+L+ + I+I P +N ++ +V I+G
Sbjct: 365 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDN------SNERLVTITGTQ 418
Query: 429 DLAKDALIQVMTRL 442
+ + AL + +RL
Sbjct: 419 ECNQMALYMLYSRL 432
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 134/299 (44%), Gaps = 47/299 (15%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET-NAFED-GDKFV 109
+ +GSIIG+ G+ +K+ R ++ ++I I + S ER+VT+ +++ AF G KF
Sbjct: 29 KDVGSIIGKKGDTIKRFREESGARINISDG--SSPERIVTITGSTENILKAFNMIGKKF- 85
Query: 110 SPAQDALFKVHDRVIAEELRGDEDSDGGH--------QVTAKLLVPSDQIGCVIGKGGQI 161
+ED H VT +L+VP+ Q G +IGKGG
Sbjct: 86 ---------------------EEDMKAAHVNSSVPVPPVTLRLIVPASQCGSLIGKGGSK 124
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
++ IR TGA I++ D LP+ R+ V +SG + + + I + ++P +
Sbjct: 125 IKEIREVTGASIQVAGD-MLPNSTERA---VTVSGTPDAISQCVYHICCVMLESPPKGAT 180
Query: 222 L-LASAISNSHSSSGSLV-GPTAATPIVGIA----PLMGPYGGYKGDTAGDWSRSLYSAP 275
+ ++ S+SG +V T + +A P + P A + S P
Sbjct: 181 IPYKPRPASGTSTSGPVVFAGGQLTKLHQLALQQTPYITPGTTLPAALATQFGVQTASQP 240
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+ S L P IG +IGKGG IN+IRQ SGA IK+ D +T++
Sbjct: 241 GNPSSQTH---ELTIPNELIGCIIGKGGCKINEIRQCSGATIKIAGMQEGSTDRQVTIT 296
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 95/201 (47%), Gaps = 37/201 (18%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS----- 335
S ++RL+ ++G +IGK G I + R+ESGA I + S+ IT S+
Sbjct: 17 SVTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISDGSSPERIVTITGSTENILK 76
Query: 336 ------KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
K+F ED +A + + V + P T RL+VP S+ G LIGKGG
Sbjct: 77 AFNMIGKKFEEDMKAAHVNSSVPVPP--------------VTLRLIVPASQCGSLIGKGG 122
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR 449
S I E+R +T A+I++ + LP + + V +SG DA+ Q + + + +
Sbjct: 123 SKIKEIREVTGASIQVA-GDMLP---NSTERAVTVSG----TPDAISQCVYHICCVMLES 174
Query: 450 EGAVSTFVPVLPYIPVSENGS 470
+T +PY P +G+
Sbjct: 175 PPKGAT----IPYKPRPASGT 191
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 46/177 (25%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDETN--- 100
R + P + GS+IG+GG +K++R T + I++ G+ +P S ER VTV D +
Sbjct: 105 LRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAGDMLPNSTERAVTVSGTPDAISQCV 164
Query: 101 ------AFEDGDKFVS------PAQDA------------LFKVHDRVIAE--------EL 128
E K + PA L K+H + + L
Sbjct: 165 YHICCVMLESPPKGATIPYKPRPASGTSTSGPVVFAGGQLTKLHQLALQQTPYITPGTTL 224
Query: 129 RGDEDSDGGHQV----------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+ G Q T +L +P++ IGC+IGKGG + IR +GA I+I
Sbjct: 225 PAALATQFGVQTASQPGNPSSQTHELTIPNELIGCIIGKGGCKINEIRQCSGATIKI 281
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S T L +P IGC+IGKGG I E+R+ + A I+I
Sbjct: 245 SQTHELTIPNELIGCIIGKGGCKINEIRQCSGATIKI 281
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 74 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 125
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 126 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 180
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 181 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 236
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 237 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 296
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 297 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 355
Query: 322 SSTEG 326
++TEG
Sbjct: 356 NATEG 360
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 63 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 115
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 116 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 155
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 156 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 182
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 183 STGAQVQV 190
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 71 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 118
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 119 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 178
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 179 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 230
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 231 AT----IPYRP 237
>gi|146336943|gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 135/282 (47%), Gaps = 31/282 (10%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + ++I++ E PG+ +R++ V A +E
Sbjct: 36 TYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEV 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ + L K + EL ++D+D + +L+VP+ G +IGKGG
Sbjct: 96 ---------LRAVELILSK-----LLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGG 141
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+++ E+ A I+I ++ S ++D +V ++G + + I S+L ++P S
Sbjct: 142 ATIRSFIEESQAGIKISPQDN--SYYGQNDRIVTVTGTLDEQMRGIDLIVSKLAEDPHYS 199
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP--YGGYKGDTAGDWSRSLYSAPRD 277
++S+ + SG+ V P + P + P Y G G ++ + ++
Sbjct: 200 H-----SMSSPFTYSGAYVSGYQGVPYTYVLPSVAPPAYNGVNYRPNGTGAK--FQNSKE 252
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D S+ S+ + +IG V+G+GG I+ I Q SGA IK+
Sbjct: 253 DRSN---SMTIGVADEHIGLVVGRGGRNISDISQTSGAKIKI 291
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 79/170 (46%), Gaps = 28/170 (16%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT--- 342
+R + + G VIGKGG+ I + +SGA I++ ++ EFF T
Sbjct: 38 VRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNN-------------EFFPGTTDR 84
Query: 343 ---LSATIEAVVR-----LQPRCSEKIERDSGLISFTT--RLLVPTSRIGCLIGKGGSII 392
+S I V+R L SE D + T RL+VP G +IGKGG+ I
Sbjct: 85 IIMVSGAINEVLRAVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATI 144
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
++A I+I P++N ++D +V ++G LD + ++++L
Sbjct: 145 RSFIEESQAGIKISPQDN--SYYGQNDRIVTVTGTLDEQMRGIDLIVSKL 192
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 185/420 (44%), Gaps = 65/420 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 197 DFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 256
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A + D + E + D+ + K+L + +G +IGK G+
Sbjct: 257 T-------------ACHMIMDIMQKEAV----DTKVTEDIPLKILAHNSLVGRLIGKEGR 299
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN----- 215
++ I +T +I I + L + + + G +A +I +L +
Sbjct: 300 NLKKIEEDTETKITISSLQDL--TIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDV 357
Query: 216 -PSRSQHLLASAISNSH---SSSGSLVGPTAATPIVGIAPL----MGPYGGYKGDTAGDW 267
Q L +S S S+G V P AA P GI P+ P+ G+ G
Sbjct: 358 AAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGP-RGIPPVPPTGYNPFLGHSSQLGG-- 414
Query: 268 SRSLYSAP-------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
LY P + + ++ + L P +G +IGK G I Q+ + +GA+IK+
Sbjct: 415 ---LYGVPPASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI- 470
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLL 375
+ E D V+ + ++ EA + Q R K++ ++ + T +
Sbjct: 471 -APAESPD----VTQRMVI---ITGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIK 522
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
VP+S G +IGKGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 523 VPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 578
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVY 93
Q PE V P + +G+IIG+ G+ +KQL + I+I P +R+V +
Sbjct: 427 QHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMV-II 485
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ E G F ++ F + V ++ + VPS G
Sbjct: 486 TGPPEAQFKAQGRIFGKLKEENFFTAKEEV---------------KLETHIKVPSSAAGR 530
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDE 179
VIGKGG+ V +++ T A++ + +D+
Sbjct: 531 VIGKGGKTVNELQNLTSAEVIVPRDQ 556
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 271
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 272 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 330
Query: 322 SSTEG 326
++TEG
Sbjct: 331 NATEG 335
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 206 AT----IPYRP 212
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 104/420 (24%), Positives = 185/420 (44%), Gaps = 65/420 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S + +
Sbjct: 43 DFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGAAEKPITIHSTPEGCS 102
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A + D + E + D+ + K+L + +G +IGK G+
Sbjct: 103 T-------------ACHMIMDIMQKEAV----DTKVTEDIPLKILAHNSLVGRLIGKEGR 145
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN----- 215
++ I +T +I I + L + + + G +A +I +L +
Sbjct: 146 NLKKIEEDTETKITISSLQDL--TIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDV 203
Query: 216 -PSRSQHLLASAISNSH---SSSGSLVGPTAATPIVGIAPL----MGPYGGYKGDTAGDW 267
Q L +S S S+G V P AA P GI P+ P+ G+ G
Sbjct: 204 AAINQQSNLIPGLSLSALGIFSTGLSVLPPAAGP-RGIPPVPPTGYNPFLGHSSQLGG-- 260
Query: 268 SRSLYSAP-------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
LY P + + ++ + L P +G +IGK G I Q+ + +GA+IK+
Sbjct: 261 ---LYGVPPASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI- 316
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLL 375
+ E D V+ + ++ EA + Q R K++ ++ + T +
Sbjct: 317 -APAESPD----VTQRMVI---ITGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIK 368
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM-VQISGDLDLAKDA 434
VP+S G +IGKGG + E++ LT A + I+P++ P E+DE+ V+ISG ++ A
Sbjct: 369 VPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENDEVFVKISGHFFASQTA 424
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 17/146 (11%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVY 93
Q PE V P + +G+IIG+ G+ +KQL + I+I P +R+V +
Sbjct: 273 QHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPDVTQRMV-II 331
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ E G F ++ F + V ++ + VPS G
Sbjct: 332 TGPPEAQFKAQGRIFGKLKEENFFTAKEEV---------------KLETHIKVPSSAAGR 376
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDE 179
VIGKGG+ V +++ T A++ + +D+
Sbjct: 377 VIGKGGKTVNELQNLTSAEVIVPRDQ 402
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 173/420 (41%), Gaps = 116/420 (27%)
Query: 24 NKRRYT-GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET- 81
KR T G+D + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 22 TKRSNTAGEDGELFL--------KVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSK 73
Query: 82 --VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR----GDEDSD 135
PG+ ERV V +++ +L VH+ IAE++R G +D
Sbjct: 74 DFYPGTTERVCLVQGSAE-----------------SLLSVHN-FIAEKVREVPQGGTKND 115
Query: 136 GG----HQVT--------AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPS 183
G Q T AKL+VP+ G +IGKGG V++I E+GA +++ + P+
Sbjct: 116 LGVLLPPQTTINAERAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQLSQKPAGPN 175
Query: 184 CALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
R +V +SGE S V+KA+ I + ++P + L + +NS
Sbjct: 176 LHER---VVTVSGEPSQVQKAIRSIIHKSREDPPQGTTHLNISYTNSQG----------- 221
Query: 244 TPIVGIAPLMGPYGGYKGD----------------TAGDWSRSLYSAPRDDLSSKEFSLR 287
P+ P PY G + T GD SA + L+S +S
Sbjct: 222 -PVANSNPTGSPYAGGSAEQVLTPFQPAPPAPPAITGGDLLA--ISAALNTLASYGYSTG 278
Query: 288 L-VCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC-LITVSSKEFFEDTLSA 345
+ P+ +GGV ++ E+G A+ + + +V+ KE E
Sbjct: 279 MGFNPL--VGGVHPAAVNLLASYTGEAGPALGLGGGGILLEKMGAESVTGKETLE----- 331
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ VP + +G ++GKGG + E + LT A I+I
Sbjct: 332 ----------------------------MAVPETLVGAILGKGGKTLVEYQELTGARIQI 363
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ S++
Sbjct: 33 ELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAES 92
Query: 338 FF--EDTLSATIEAV----------VRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
+ ++ + V V L P+ + ER + +L+VP + G +I
Sbjct: 93 LLSVHNFIAEKVREVPQGGTKNDLGVLLPPQTTINAER-----AKQAKLIVPNTTAGLII 147
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
GKGG+ + + + A +++ K P + + +V +SG+ + A+ ++ + R
Sbjct: 148 GKGGATVRSIMEESGAWVQLSQKPAGPNL---HERVVTVSGEPSQVQKAIRSIIHKSR 202
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 185/411 (45%), Gaps = 58/411 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G +K L T+SK+ I + G+ E+ +T+++ + +
Sbjct: 118 RMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS---- 173
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
+A R+I + ++ + D + ++ K+L + +G +IGK G+ ++
Sbjct: 174 ---------EAC-----RMILDIMQKEADETKSAEEIPLKILAHNSLVGRLIGKEGRNLK 219
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------P 216
I +TG +I I + L + + + G KA +I +L +
Sbjct: 220 KIEQDTGTKITISPLQDL--TIYNPERTITVKGSTEACSKAQVEIMKKLREAYENDVVAV 277
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP- 275
++ +L+ N+ + + +TP A PY + +A + LY AP
Sbjct: 278 NQQANLIPGLNLNALGIFSTGLSMLPSTPGARGAAAATPYHPFASSSA--YLSGLYGAPP 335
Query: 276 ------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
+ L +E + L P +G +IGK G I Q+ + +GA+IK+ + EG D
Sbjct: 336 GSAFPHQHPLPEQEV-VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--APAEGPD- 391
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCL 384
+S+ ++ EA + Q R K++ ++ + + VP+ G +
Sbjct: 392 ----ASERMV--IITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRV 445
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 446 IGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVKIIGHFFASQTA 492
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G+ +KQL + I+I P + ER+V + + E
Sbjct: 346 PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVII-TGPPE 404
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 405 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIKVPSFAAGRVIGKG 449
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 450 GKTVNELQNLTSAEVIVPRDQ 470
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 48/228 (21%), Positives = 92/228 (40%), Gaps = 13/228 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
EF LR++ P +G +IGK G I + +++ + + + G + IT+ +
Sbjct: 114 EFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHA------ 167
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
T EA + ++ + ++L S +G LIGK G + ++ + T
Sbjct: 168 TPEGCSEACRMILDIMQKEADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGT 227
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
I I P ++L + + + G + A +++M +LR + AV+ ++P
Sbjct: 228 KITISPLQDL--TIYNPERTITVKGSTEACSKAQVEIMKKLREAYENDVVAVNQQANLIP 285
Query: 462 YIPVSENGSDGLNYESRDSKRHGRGP----PYGGYGSSDLAAGDSYGS 505
+ ++ G S RG PY + SS YG+
Sbjct: 286 GLNLNALGIFSTGLSMLPSTPGARGAAAATPYHPFASSSAYLSGLYGA 333
>gi|74151175|dbj|BAE27710.1| unnamed protein product [Mus musculus]
Length = 579
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 197/422 (46%), Gaps = 67/422 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP---LMGPYGGYKGDTAGDWSRSLY 272
S +L A I + ++ L PT+ P P L PY
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY---------------- 397
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D +
Sbjct: 398 --PQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVR 452
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ ++ EA + Q R KI+ ++ + + + VP+ G +IGK
Sbjct: 453 MV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGK 505
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
GG + E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 506 GGKTVNELQSLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 561
Query: 444 AN 445
+
Sbjct: 562 QH 563
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 48/189 (25%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 399 QFEQSETETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 457
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H RV
Sbjct: 458 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRV----------------------- 494
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE----LVQISGEASVVK 202
PS G VIGKGG+ V ++S + A++ + +D+ DE +V+I+G
Sbjct: 495 PSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQ-------TPDENDQVVVKITGHFYA-- 545
Query: 203 KALCQIASR 211
CQ+A R
Sbjct: 546 ---CQVAQR 551
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 271
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 272 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 330
Query: 322 SSTEG 326
++TEG
Sbjct: 331 NATEG 335
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 206 AT----IPYRP 212
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 48 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 99
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 100 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 154
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 155 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 210
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 211 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 270
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 271 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 329
Query: 322 SSTEG 326
++TEG
Sbjct: 330 NATEG 334
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 37 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 89
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 90 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 129
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 130 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 156
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 157 STGAQVQV 164
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 45 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 92
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 93 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 152
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 153 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 204
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 205 AT----IPYRP 211
>gi|225543383|ref|NP_076159.3| insulin-like growth factor 2 mRNA-binding protein 3 [Mus musculus]
gi|81916748|sp|Q9CPN8.1|IF2B3_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3;
Short=mIMP-3; AltName: Full=IGF-II mRNA-binding protein
3; AltName: Full=VICKZ family member 3
gi|11933384|dbj|BAB19755.1| igf2 mRNA-binding protein 3 [Mus musculus]
gi|12847973|dbj|BAB27779.1| unnamed protein product [Mus musculus]
gi|28175449|gb|AAH45138.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|29145081|gb|AAH49082.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|148666183|gb|EDK98599.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Mus musculus]
Length = 579
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 197/422 (46%), Gaps = 67/422 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP---LMGPYGGYKGDTAGDWSRSLY 272
S +L A I + ++ L PT+ P P L PY
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY---------------- 397
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D +
Sbjct: 398 --PQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVR 452
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ ++ EA + Q R KI+ ++ + + + VP+ G +IGK
Sbjct: 453 MV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGK 505
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
GG + E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 506 GGKTVNELQSLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 561
Query: 444 AN 445
+
Sbjct: 562 QH 563
Score = 45.4 bits (106), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 48/189 (25%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 399 QFEQSETETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 457
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H RV
Sbjct: 458 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRV----------------------- 494
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE----LVQISGEASVVK 202
PS G VIGKGG+ V ++S + A++ + +D+ DE +V+I+G
Sbjct: 495 PSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQ-------TPDENDQVVVKITGHFYA-- 545
Query: 203 KALCQIASR 211
CQ+A R
Sbjct: 546 ---CQVAQR 551
>gi|224153471|ref|XP_002337357.1| predicted protein [Populus trichocarpa]
gi|222838904|gb|EEE77255.1| predicted protein [Populus trichocarpa]
Length = 103
Score = 79.7 bits (195), Expect = 4e-12, Method: Composition-based stats.
Identities = 37/69 (53%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 372 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLA 431
TRLLVP+S++GC++G+G I EMRRL +A I + PK PK ASED+E+VQISG+ +A
Sbjct: 3 TRLLVPSSKVGCILGQGSQDINEMRRL-QAEICVYPKNEKPKCASEDEELVQISGNYGVA 61
Query: 432 KDALIQVMT 440
KD L+ + +
Sbjct: 62 KDVLVDIAS 70
Score = 57.4 bits (137), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+LLVPS ++GC++G+G Q + +R A+I + P CA +ELVQISG V K
Sbjct: 4 RLLVPSSKVGCILGQGSQDINEMR-RLQAEICVYPKNEKPKCASEDEELVQISGNYGVAK 62
Query: 203 KALCQIAS 210
L IAS
Sbjct: 63 DVLVDIAS 70
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 142/313 (45%), Gaps = 41/313 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 271
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 272 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN 331
Query: 322 SSTEGDDCLITVS 334
++ + IT++
Sbjct: 332 ATEGSSERQITIT 344
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 206 AT----IPYRP 212
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/315 (27%), Positives = 143/315 (45%), Gaps = 43/315 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R D+ ++I I E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVTITGPTDAI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS-------R 218
R TGAQ+++ D LP+ R+ V ISG + + + QI L ++P R
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGAPEAIIQCVKQICVVLLESPPKGATIPYR 181
Query: 219 SQHLLASAISNSHSSSGSLVGPTAA--TPIVGIAPL-----MGPYGGYKGDTAGDWSRSL 271
+ I + +G + A + ++ PL G Y D + ++
Sbjct: 182 PKPASTPVIFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQGQYAIPHPDLSKLHQLAM 241
Query: 272 YSAPRD------------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P D S++ + L P IG +IG+ G IN+IRQ SGA IK+
Sbjct: 242 QQTPFTPLGQTTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 301
Query: 320 DSSSTEGDDCLITVS 334
++ + IT++
Sbjct: 302 ANAMEGSSERQITIT 316
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 92/191 (48%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R++SGA I + +EG+ C + T+
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINI----SEGN-CPERIV-------TI 63
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 64 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
EMR T A +++ + LP + + V ISG A +A+IQ + ++ L +
Sbjct: 124 EMRESTGAQVQVA-GDMLP---NSTERAVTISG----APEAIIQCVKQICVVLLESPPKG 175
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 176 AT----IPYRP 182
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 62/189 (32%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R ++GA+I I + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 60 IVTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV--- 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 127 ESTGAQVQV 135
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 135 DGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D +Q T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ +
Sbjct: 260 DASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----AMEGSSERQIT 314
Query: 194 ISGEASVVKKALCQIASRLHD 214
I+G + + A I +R D
Sbjct: 315 ITGTPANISLAQYLINARFRD 335
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIFQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 180 PKPACTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 239
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 240 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 298
Query: 322 SSTEG 326
++TEG
Sbjct: 299 NATEG 303
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 34/213 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+ Q + ++ + + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIFQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
GA + P PV G + + + H
Sbjct: 173 GATIPYRPKPACTPVIFAGGQAYTIQGQYAIPH 205
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 142/302 (47%), Gaps = 41/302 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIA------PLMGPYGGYKGDTAGDWSRSLY 272
+ SSS + T + +A P+ G+ G + Y
Sbjct: 173 GVTI---PYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGY 229
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
A D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + D +T
Sbjct: 230 WAGLDA-SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVT 288
Query: 333 VS 334
++
Sbjct: 289 IT 290
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|410911650|ref|XP_003969303.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Takifugu rubripes]
Length = 581
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 187/422 (44%), Gaps = 73/422 (17%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD-ET 99
D R L P + +G+IIG+ G+ ++ L T SKI I + G+ E+ +T++S + +
Sbjct: 194 DIPLRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPEGSS 253
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDE-DSDGGHQVTAKLLVPSDQIGCVIGKG 158
NA R I E ++ + D+ ++ K+LV ++ +G +IGK
Sbjct: 254 NAC-------------------RTIMEIMQKEAIDTKFTEEIPLKILVHNNFVGRLIGKE 294
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +TG +I I + L + + + G +A ++ ++ +++
Sbjct: 295 GRNLKKIEQDTGTKITISSLQDL--TVYNPERTITVKGAIENCGRAEEEVMKKIREAYES 352
Query: 216 PSRSQHLLASAISNSHSSSGSLV--GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS 273
+ +L ++ I + ++ L G P + P G +GGY S
Sbjct: 353 DVAAMNLQSNLIPGLNLNALGLFPSGTPGMGPSMSSLPPPGAHGGY----------SFGG 402
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD----C 329
P + ++ L P +G +IGK G I Q+ +GA+IK+ + EG D
Sbjct: 403 NPESE------TVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKI--APAEGMDPKHRM 454
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCL 384
+I V EA + Q R K++ ++ + + VP+ G +
Sbjct: 455 VIIVGPP-----------EAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRV 503
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL---DLAKDALIQVMTR 441
IGKGG + E++ LT A + ++P++ P +D +V+I G LA+ + +++ +
Sbjct: 504 IGKGGKTVNELQNLTCAEV-VVPRDQTPD--EKDQVIVKIIGHFFACQLAQRKIQEILAQ 560
Query: 442 LR 443
+R
Sbjct: 561 VR 562
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 39/180 (21%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS----EERVVTVYSA 95
PE P +G+IIG+ G+ +KQL + I+I P + R+V +
Sbjct: 404 PESETVHLFIPTLAVGAIIGKQGQHIKQLSHFAGASIKIA---PAEGMDPKHRMVII--- 457
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQI 151
V P +A FK R+ E G ++ ++ A + VPS
Sbjct: 458 -------------VGPP-EAQFKAQCRIFGKLKEENFFGPKEEV---KLEAHIKVPSFAA 500
Query: 152 GCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
G VIGKGG+ V +++ T A++ + +D+ + + +V+I G CQ+A R
Sbjct: 501 GRVIGKGGKTVNELQNLTCAEVVVPRDQ---TPDEKDQVIVKIIGHFFA-----CQLAQR 552
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 142/308 (46%), Gaps = 54/308 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIA------PLMGPYGGYKG------DTAGD 266
+ SSS + T + +A P+ G+ G + G
Sbjct: 173 G---VTIPYRPKPSSSPVIFAGGQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGY 229
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
W D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 230 WGL--------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGS 281
Query: 327 DDCLITVS 334
D +T++
Sbjct: 282 TDRQVTIT 289
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|449509689|ref|XP_002192903.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Taeniopygia guttata]
Length = 531
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 99/413 (23%), Positives = 184/413 (44%), Gaps = 71/413 (17%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K L T+SK+ I + G+ E+ +T+++ + +
Sbjct: 116 DFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS 175
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I + ++ + D + +V K+L + +G +IGK G
Sbjct: 176 -------------EAC-----RMILDIMQKEADETKSAEEVPLKILAHNSLVGRLIGKEG 217
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HD 214
+ ++ I +TG +I I + L + + + G A +I +L +D
Sbjct: 218 RNLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGSTEACSNAEVEIMKKLREAYEND 275
Query: 215 NPSRSQH-------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ +Q + ++ +S S+ G+ G AATP A G +
Sbjct: 276 VVAVNQQANLIPGLNLSALGIFSTGLSMLPSTPGAR-GAAAATPYHPFA----QQSGRRR 330
Query: 262 DTAGDWSRSLYSAP-------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
+ + SLY AP + L +E + L P +G +IGK G I Q+ + +G
Sbjct: 331 TGSSAYLSSLYGAPPAGAFPHQHPLPEQEV-VNLFIPTQAVGAIIGKKGQHIKQLARFAG 389
Query: 315 AAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----IS 369
A+IK+ + EG D +S+ ++ EA + Q R K++ ++ +
Sbjct: 390 ASIKI--APAEGPD-----ASERMV--IITGPPEAQFKAQGRIFGKLKEENFFNPKEEVK 440
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ VP+ G +IGKGG + E++ LT A + I+P++ P E++E+V
Sbjct: 441 LEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVV 489
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G+ +KQL + I+I P + ER+V + + E
Sbjct: 356 PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVII-TGPPE 414
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 415 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIKVPSFAAGRVIGKG 459
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 460 GKTVNELQNLTSAEVIVPRDQ 480
>gi|193848519|gb|ACF22709.1| hypothetical protein-2 [Brachypodium distachyon]
Length = 429
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 166/343 (48%), Gaps = 60/343 (17%)
Query: 109 VSPAQDALFKVHD------RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
+SPAQ+AL V D RV+A R E V+ +LV + + +G+G +
Sbjct: 114 LSPAQEALVSVVDVGGVLHRVVA---RAPE------FVSCLVLVEAAGLE-ALGRG--TL 161
Query: 163 QNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
+ I SET A++R+ L + PS E+++I+G+ + ++KA+ ++S L +
Sbjct: 162 EAIASETNAELRVTSLAEGATPSVH-SPKEVIEITGDRTTIRKAIVALSSYLQGD----- 215
Query: 221 HLLASAISNSHSSSGSLVGPTAATPI-------------VGIAPLMGPYGGYKGDTAGDW 267
L A +++ S ++ + P ++ + A + P+ D AG+
Sbjct: 216 -LHACSLTTSVTTPSPMF-PWKSSEVPEPNYGDLHSGVSTKCANINVPWIDCPQDVAGNV 273
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
++L ++ S RL+C V GG+IGK G II E+GA+I V + +
Sbjct: 274 ET-------ENL--QQISFRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCM 324
Query: 328 DCLITVSSKEF---FEDTLSATIEAVVRLQPRCSEKIERD--SGLISFTTRLLVPTSRIG 382
+ +IT+S+ E SA + R+ E++ER+ G + R+LVP S+
Sbjct: 325 ERVITISALESPGKHSKVQSAILCIFDRM-----EEVERNLMFGKPECSARVLVPKSQFS 379
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQIS 425
L+G GG+II EM + T A I IL + ++P AS + ++Q S
Sbjct: 380 SLVGLGGAIIKEMVKSTGARIEILDEMDVPACASNCERVLQAS 422
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 80/151 (52%), Gaps = 11/151 (7%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LC + G +IG+ G I+K +T + I +G G ERV+T+ +A E
Sbjct: 283 FRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITI-------SALES 335
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
K S Q A+ + DR+ EE+ + G + +A++LVP Q ++G GG I++
Sbjct: 336 PGKH-SKVQSAILCIFDRM--EEVERNL-MFGKPECSARVLVPKSQFSSLVGLGGAIIKE 391
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQIS 195
+ TGA+I IL + +P+CA + ++Q S
Sbjct: 392 MVKSTGARIEILDEMDVPACASNCERVLQAS 422
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 271
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 272 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 330
Query: 322 SSTEG 326
++TEG
Sbjct: 331 NATEG 335
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 206 AT----IPYRP 212
>gi|291400299|ref|XP_002716509.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 599
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 178/400 (44%), Gaps = 53/400 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL-----HD 214
+ ++ I ETG +I I + L + + + G A +I +L +D
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEAEIMKKLREAFEND 352
Query: 215 NPSRSQH------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
+ +Q L SA+ + L P AP P+ + G + +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSMLPPPAGPRGAPPTAPYH-PFATHSGYFSSLYP 411
Query: 269 RSLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG
Sbjct: 412 HHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGP 469
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIG 382
D VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 470 D----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAG 522
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 523 RVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 52 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 103
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 104 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 158
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 159 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 214
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 215 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 274
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 275 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 333
Query: 322 SSTEG 326
++TEG
Sbjct: 334 NATEG 338
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 41 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 93
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 94 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 133
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 134 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 160
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 161 STGAQVQV 168
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 96
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 97 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 156
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 157 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 208
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 209 AT----IPYRP 215
>gi|403299426|ref|XP_003940488.1| PREDICTED: RNA-binding protein Nova-2 [Saimiri boliviensis
boliviensis]
Length = 508
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 135/301 (44%), Gaps = 51/301 (16%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 206 TKRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 257
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 258 FYPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 314
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 315 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 371
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
V KA+ I ++ ++P S L + S ++ GP A + P G
Sbjct: 372 QVHKAVSAIVQKVQEDPQSSSCL--------NISYANVAGPVANS---------NPTG-- 412
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S Y++P ++ P +G ++GKGG + + ++ +GA I++
Sbjct: 413 ----------SPYASPXXXXXXXXIAV----PENLVGAILGKGGKTLVEYQELTGARIQI 458
Query: 320 D 320
Sbjct: 459 S 459
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 216 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 275
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 276 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 333
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 334 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 385
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 142/306 (46%), Gaps = 44/306 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDW---SRS 270
+ + A + + ++ P T + +A P+ G T +
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPL-GQTTPAFPGEKLP 238
Query: 271 LYSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
L+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+
Sbjct: 239 LHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI- 297
Query: 321 SSSTEG 326
+++TEG
Sbjct: 298 ANATEG 303
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 34/213 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
GA + P PV G + + + H
Sbjct: 173 GATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 205
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 271
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 272 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 330
Query: 322 SSTEG 326
++TEG
Sbjct: 331 NATEG 335
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 206 AT----IPYRP 212
>gi|339258170|ref|XP_003369271.1| putative KH domain protein [Trichinella spiralis]
gi|316966532|gb|EFV51093.1| putative KH domain protein [Trichinella spiralis]
Length = 640
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 155/351 (44%), Gaps = 88/351 (25%)
Query: 17 DYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKI 76
D + H KRR +G + GPE R L + G++IG+GGE +K+LR + +
Sbjct: 265 DESLHYSRKRRRSGHE------GPE---LRLLIASKSAGAVIGKGGENIKRLRSQYCASV 315
Query: 77 RIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG 136
I ++ + ERV+ + A+ V+ D + + R+ D+ G
Sbjct: 316 NIPDS--STPERVLNISCAN------------VATLTDCVSDLIPRL-------DDGKSG 354
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA-LRSDELVQIS 195
+ ++LV Q G +IG+ G ++ +R TGA IR+ + CA L ++ ++Q S
Sbjct: 355 PQEAEVRMLVHQSQAGAIIGRAGFKIKELRDITGAGIRVYSE-----CAPLSTERVIQFS 409
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAI--------------------SNS----- 230
G+ + A+ + + P + L A SNS
Sbjct: 410 GDKEKIVNAIRHVKEICEETPIKGVERLYDANNYDMSYALDYGGYTTDRNWRSNSTTRRS 469
Query: 231 ---HSSSGSLVGPTAATP----IVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKE 283
HSSS P A+TP + I+P+ G SLY+ ++L +
Sbjct: 470 SGIHSSS-----PAASTPHFTGVNEISPMQA---------LGYSPMSLYA---ENLIA-- 510
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
++++ P G +IGKGG IN+IR+ESGA I VD + + D+ +IT+S
Sbjct: 511 -TVQVTIPKELGGTIIGKGGERINRIREESGAQIVVDPPTPDSDERIITIS 560
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 14/153 (9%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
LRL+ + G VIGKGG I ++R + A++ + SST I+ ++ D +S
Sbjct: 284 LRLLIASKSAGAVIGKGGENIKRLRSQYCASVNIPDSSTPERVLNISCANVATLTDCVSD 343
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
I PR + SG R+LV S+ G +IG+ G I E+R +T A IR+
Sbjct: 344 LI-------PRLDDG---KSGPQEAEVRMLVHQSQAGAIIGRAGFKIKELRDITGAGIRV 393
Query: 406 LPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
E P +++E ++Q SGD + +A+ V
Sbjct: 394 Y-SECAP-LSTE--RVIQFSGDKEKIVNAIRHV 422
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 239
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 240 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 298
Query: 322 SSTEG 326
++TEG
Sbjct: 299 NATEG 303
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 173 GAT----IPYRP 180
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 179
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 180 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 239
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 240 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 298
Query: 322 SSTEG 326
++TEG
Sbjct: 299 NATEG 303
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 173 GAT----IPYRP 180
>gi|157114471|ref|XP_001652287.1| igf2 mRNA binding protein, putative [Aedes aegypti]
gi|108877277|gb|EAT41502.1| AAEL006876-PA [Aedes aegypti]
Length = 541
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 180/411 (43%), Gaps = 41/411 (9%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L +G+IIGR G ++Q+ ++++++ + + GS E+ +T+Y +
Sbjct: 126 DFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSLEKAITIYGNPENCT 185
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+ + I E ++ + ++ ++ K+L ++ IG +IGK G
Sbjct: 186 S------------------ACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKSGN 227
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ I +T +I + + S L + ++ + G + + QI+++L +
Sbjct: 228 TIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGSIDNMSRGESQISAKLRQSYENDL 285
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAP-LMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
LA S + P A G G G Y G + +
Sbjct: 286 QALAP-----QSIMFPGLHPMAMMSTAGNGMGFTGRTGMYPGTSYPMYQPPTVPGAPPGS 340
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
S + + L P +G +IG G+ I I + SGA++K+ + E D L + ++
Sbjct: 341 SDVQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKI--APLEADKPLEQQTERKV- 397
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIGKGGSIIT 393
T+ T EA + Q EK+ R+ G +S T +LVP++++G +IGKGG +
Sbjct: 398 --TIVGTPEAQWKAQYLIFEKM-REEGFVSGTDDVRLTVEILVPSAQVGRIIGKGGQNVR 454
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
E++R+T + I+ LP E+ +++ V I G + A ++ T + A
Sbjct: 455 ELQRVTGSIIK-LP-EHTTNTPVDEETTVHIIGPFFSVQSAQRRIRTMMLA 503
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 344 QETTYLYI-PNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGT 402
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGC 153
+ A +K +I E++R + G V T ++LVPS Q+G
Sbjct: 403 PE-----------------AQWKAQ-YLIFEKMREEGFVSGTDDVRLTVEILVPSAQVGR 444
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIAS-RL 212
+IGKGGQ V+ ++ TG+ I++ EH + + + V I G V+ A +I + L
Sbjct: 445 IIGKGGQNVRELQRVTGSIIKL--PEHTTNTPVDEETTVHIIGPFFSVQSAQRRIRTMML 502
Query: 213 HDNP 216
NP
Sbjct: 503 ATNP 506
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 62 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 113
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 114 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 168
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 169 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 224
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 225 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 284
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 285 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 343
Query: 322 SSTEG 326
++TEG
Sbjct: 344 NATEG 348
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 51 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 103
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 104 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 143
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 144 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 170
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 171 STGAQVQV 178
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 59 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 118
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 119 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 165
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 166 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 217
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 218 GAT----IPYRP 225
>gi|431908994|gb|ELK12585.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Pteropus
alecto]
Length = 613
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 185/406 (45%), Gaps = 64/406 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S+ ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 456 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 509
Query: 391 I-------ITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+ E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 510 TASTSAKPVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHF 551
>gi|327265639|ref|XP_003217615.1| PREDICTED: poly(rC)-binding protein 4-like [Anolis carolinensis]
Length = 422
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 142/303 (46%), Gaps = 54/303 (17%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ ++D
Sbjct: 30 LRMLMHGKEVGSIIGKKGETVKRIREQSTARITISE---GSCPERITTITGSTD------ 80
Query: 104 DGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGH----QVTAKLLVPSDQIGCVIGK 157
A+F+ + EE G +GG VT +L++P+ Q G +IGK
Sbjct: 81 -----------AVFRAVSMIAFKLEEDLGTGAINGGTVSKPPVTLRLVIPASQCGSLIGK 129
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ V +SG + + + QI + + ++P
Sbjct: 130 AGAKIKEIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIIQCVRQICAVILESPP 185
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR-------- 269
+ + + + SL GP + G + + G YGG +
Sbjct: 186 KGATI-------PYHPNLSL-GPVLLSANQGFS-MQGQYGGISQAEVAKLQQLSGHPVSF 236
Query: 270 -SLYSAPRD----DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
SL P D +S+ S + P IG +IG+ G+ I++IRQ SGA IK+ + T
Sbjct: 237 SSLGQTPSIVAGLDTNSQNSSQEFLVPNDLIGCIIGRQGSKISEIRQMSGAHIKIG-NQT 295
Query: 325 EGD 327
EG
Sbjct: 296 EGS 298
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 42/230 (18%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S C ++
Sbjct: 25 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEGS-----CPERIT------ 73
Query: 341 DTLSATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGS 390
T++ + +AV R + K+E D +G I+ T RL++P S+ G LIGK G+
Sbjct: 74 -TITGSTDAVFRAVSMIAFKLEEDLGTGAINGGTVSKPPVTLRLVIPASQCGSLIGKAGA 132
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR- 449
I E+R T A +++ + LP + + V +SG DA+IQ + ++ A + +
Sbjct: 133 KIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIIQCVRQICAVILESP 184
Query: 450 -EGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYGSSDLA 498
+GA + P L PV + + G + + + YGG +++A
Sbjct: 185 PKGATIPYHPNLSLGPVLLSANQGFSMQGQ----------YGGISQAEVA 224
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 82/190 (43%), Gaps = 60/190 (31%)
Query: 130 GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSD 189
G E+++ +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 18 GLEETELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEG----SCPER-- 71
Query: 190 ELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
+ I+G V +A+ IA +L ++ +G++ G T + P V
Sbjct: 72 -ITTITGSTDAVFRAVSMIAFKLEED----------------LGTGAINGGTVSKPPV-- 112
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
+LRLV P + G +IGK GA I +I
Sbjct: 113 -----------------------------------TLRLVIPASQCGSLIGKAGAKIKEI 137
Query: 310 RQESGAAIKV 319
R+ +GA ++V
Sbjct: 138 RETTGAQVQV 147
>gi|224131210|ref|XP_002328482.1| predicted protein [Populus trichocarpa]
gi|222838197|gb|EEE76562.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDED---SDGGHQVTAKLLVPSDQIGCVIG 156
+A E+ D + PA D L +VH R+I + L GD G +V+ +LLVP+ Q G +IG
Sbjct: 3 SAKEEPDSSLPPAMDGLLRVHKRII-DGLEGDSSHAPPSSGAKVSTRLLVPASQAGSLIG 61
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G V++I+ + +R+L E LP +L+ D +V++ GEA V KA+ IAS+L
Sbjct: 62 KQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQL 117
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
VS+KE + +L ++ ++R+ R + +E DS +TRLLVP S+ G LIG
Sbjct: 2 VSAKEEPDSSLPPAMDGLLRVHKRIIDGLEGDSSHAPPSSGAKVSTRLLVPASQAGSLIG 61
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
K G + ++ + +R+L E+LP + +DD +V++ G+ A+ + ++LR L
Sbjct: 62 KQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQLRKFL 121
Query: 447 FDR 449
DR
Sbjct: 122 VDR 124
>gi|431909188|gb|ELK12778.1| RNA-binding protein Nova-2 [Pteropus alecto]
Length = 334
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/300 (23%), Positives = 136/300 (45%), Gaps = 41/300 (13%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 22 TKRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 130
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 131 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 187
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
V KA+ I ++ ++P S S ++ S+++ + GP
Sbjct: 188 QVHKAVSAIVQKVQEDPQSS-----SCLNISYAN------------------VAGPVANS 224
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
A + +A + S + + + P +G ++GKGG + + ++ +GA I++
Sbjct: 225 NPTAAAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQI 284
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|402860703|ref|XP_003894762.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Papio anubis]
Length = 536
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 186/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 189
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 190 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 231
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 232 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 289
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 290 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 349
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 350 HQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 407
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 408 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 460
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 461 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 508
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 362 PEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 420
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 421 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 465
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 466 GKTVNELQNLTSAEVIVPRDQ 486
>gi|402860705|ref|XP_003894763.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Papio anubis]
Length = 542
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 186/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 136 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 195
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 196 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 237
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 238 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 295
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 296 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 355
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 356 HQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 413
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 414 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 466
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 514
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 368 PEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 426
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 427 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 471
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 472 GKTVNELQNLTSAEVIVPRDQ 492
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 223 -------LASAISNSHSSSGSLVGP--------TAATPIVGIAPLMGPYGGYKGDT---- 263
+ A +++ G P A PL + G+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 271
Query: 264 AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ ++
Sbjct: 272 SSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-AN 330
Query: 323 STEG 326
+TEG
Sbjct: 331 ATEG 334
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 206 AT----IPYRP 212
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 139/290 (47%), Gaps = 38/290 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTD-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +IA + D + + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAF-AMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS- 217
G ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + + +
Sbjct: 117 GSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLEAYTI 172
Query: 218 RSQHLLASA-ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+ Q+ + ++ H + + T TP+ P P ++ + + +
Sbjct: 173 QGQYAIPHPDLTKLHQLA---MQQTPFTPLGQTTPAF-PGEKLPLHSSEEAQNLMGQSSG 228
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
D S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 229 LDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 277
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I+NS S+S + T+ P+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------ITNSMSNSTA----TSKPPV----- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 43/173 (24%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 159
Query: 100 --------NAFEDGDKFVSPAQDALFKVHDRVI------------------------AEE 127
A+ ++ P D L K+H + +EE
Sbjct: 160 KQICVVMLEAYTIQGQYAIPHPD-LTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEE 218
Query: 128 LRGDEDSDGGHQV-----TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+ G T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 219 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 271
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 22/171 (12%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + + IT + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFK--- 70
Query: 344 SATIEAVVRLQPRCSEKIER---DSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRR 397
A + + E I +S S T RL+VP S+ G LIGKGGS I E+R
Sbjct: 71 -----AFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 126 STGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE 168
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 143/327 (43%), Gaps = 74/327 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER+VT+ +D
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPTD------- 69
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVI 155
A+FK + L+ +ED + VT +L+VP+ Q G +I
Sbjct: 70 ----------AIFKAFSMI---ALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLI 116
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++
Sbjct: 117 GKGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLES 172
Query: 216 PS-----------------------RSQHLLASAISNSHSSSGSLVGPTAATPIVGIA-P 251
P R+ +LASA +++ L A
Sbjct: 173 PPKGATIPYRPKPASAPIIFAGGQVRADTILASAGNHTELRLSYLTDLCLNCACCFQAFT 232
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDL------------SSKEFSLRLVCPVANIGGVI 299
+ G Y D ++ P L ++ S L P IG +I
Sbjct: 233 IQGQYAIPHPDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATTPTSSHELTIPNDLIGCII 292
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEG 326
G+ G+ IN+IRQ SGA IK+ +++TEG
Sbjct: 293 GRQGSKINEIRQMSGAQIKI-ANATEG 318
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + S IT
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFS 76
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED ++ + V +P T RL+VP S+ G LIGKGGS I
Sbjct: 77 MIALKFEEDINASMTNSTVTSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 124 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 175
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 176 GAT----IPYRP 183
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
++GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + SC R +
Sbjct: 9 TEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----SCPER---I 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + ++++NS +S V
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEED-------INASMTNSTVTSKPPV------------- 101
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 102 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 STGAQVQV 136
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 223 -------LASAISNSHSSSGSLVGP--------TAATPIVGIAPLMGPYGGYKGDT---- 263
+ A +++ G P A PL + G+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 271
Query: 264 AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ ++
Sbjct: 272 SSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-AN 330
Query: 323 STEG 326
+TEG
Sbjct: 331 ATEG 334
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 206 AT----IPYRP 212
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 223 -------LASAISNSHSSSGSLVGP--------TAATPIVGIAPLMGPYGGYKGDT---- 263
+ A +++ G P A PL + G+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 271
Query: 264 AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ ++
Sbjct: 272 SSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-AN 330
Query: 323 STEG 326
+TEG
Sbjct: 331 ATEG 334
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 206 AT----IPYRP 212
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 136/296 (45%), Gaps = 38/296 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E S ER+VT+ ++ F
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITGPTE--GIFR-- 73
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F AQ K + + A + S VT +L+ P Q G +IGKGG ++ I
Sbjct: 74 -AFSMIAQ----KFEEDITAAMTNSNVTSKP--PVTLRLVFPGSQCGSLIGKGGSKIKEI 126
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL-- 223
R TGAQ+++ D LP R+ V ISG + + + I S + ++P + +
Sbjct: 127 RETTGAQVQVAGD-MLPDSTERA---VTISGTPQAITQCVRHICSVMLESPPKGATIPYR 182
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL---- 279
I + + +++ P + I G Y D ++ P L
Sbjct: 183 PKVIP---AGTHAVLAPQHSAQAFAIP---GQYAFAHQDLTKLHQLAMQHIPLPSLGQSN 236
Query: 280 --------SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
S+ S L P IG +IG+ G+ IN+IRQ SGA IK+ +S+T+G
Sbjct: 237 PTFPGLDASAPTSSQELAIPNDFIGCIIGRQGSKINEIRQVSGAHIKI-ASATDGS 291
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----------TEGDDCLIT 332
+LRL+ +G +IGK G + ++R+ESGA I + S TEG +
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPERIVTITGPTEGIFRAFS 76
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ +++F ED +A + V +P T RL+ P S+ G LIGKGGS I
Sbjct: 77 MIAQKFEEDITAAMTNSNVTSKP-------------PVTLRLVFPGSQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRI 405
E+R T A +++
Sbjct: 124 KEIRETTGAQVQV 136
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
SDG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I S + +
Sbjct: 9 SDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINI-------SEGSSPERI 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + +A IA + ++ + +A++NS+ +S V
Sbjct: 62 VTITGPTEGIFRAFSMIAQKFEED-------ITAAMTNSNVTSKPPV------------- 101
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 102 ---------------------------------TLRLVFPGSQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 TTGAQVQV 136
>gi|332215037|ref|XP_003256643.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 6 [Nomascus leucogenys]
Length = 542
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 186/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 136 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 195
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 196 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 237
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 238 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 295
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 296 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 355
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 356 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 413
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 414 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 466
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 514
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 368 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 426
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 427 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 471
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 472 GKTVNELQNLTSAEVIVPRDQ 492
>gi|291240053|ref|XP_002739934.1| PREDICTED: far upstream element-binding protein-like [Saccoglossus
kowalevskii]
Length = 767
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 87/415 (20%), Positives = 164/415 (39%), Gaps = 77/415 (18%)
Query: 26 RRYTGD-DRDQFI-IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP 83
RR+ G+ ++D+F G Y P + +G +IGRGGE + +L+ ++ KI+I +
Sbjct: 106 RRHLGNGNQDEFERPGQSSLSEEYAVPDKLVGLVIGRGGEQITRLQAESGCKIQIAQDSG 165
Query: 84 GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG---HQV 140
G +R+ T+ + A E + DR+I SDGG
Sbjct: 166 GLPDRMCTL---TGNPQAIERAKALI-----------DRIIERGQGPAVGSDGGLGDGNT 211
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T +L++PS+++G VIGKGG++++ ++ G ++ +++D + + SD+ +++SG+
Sbjct: 212 TIELMIPSNKVGLVIGKGGEMIKKLQERAGVKMVMIQDA---TTSGTSDKPLRVSGDPQK 268
Query: 201 VKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK 260
K A + + D + + + + G +
Sbjct: 269 CKHARELVNELIGDKDNPGMEMFGERMDGGYDRERDDDRDFERR-------------GGR 315
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
GD Y ++ P +G VIG+GG +I +I+ E+GA I+
Sbjct: 316 GD---------YGPRMGGPPGGGGGFEMLVPRFAVGIVIGRGGDMIKKIQNETGARIQFR 366
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF---------- 370
+ L +S +D + E + L +K E+
Sbjct: 367 PDDGHSPERLAVISGS---DDKIDHAREKIDELIDSARQKDEQRRQGGGRDRGFGPPPHR 423
Query: 371 --------------------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+T VP+S+ G +IGKGG I + + A++ +
Sbjct: 424 EGGRGGGGGGFRGGPPDRMDSTTFTVPSSKCGLVIGKGGETIRNINMQSGAHVEL 478
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 90/173 (52%), Gaps = 13/173 (7%)
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G+ ++ + P S+E+++ P +G VIG+GG I +++ ESG I++ S
Sbjct: 110 GNGNQDEFERPGQSSLSEEYAV----PDKLVGLVIGRGGEQITRLQAESGCKIQIAQDSG 165
Query: 325 EGDDCLITVSSKEFFEDTLSATIEAVV-RLQPRCSEKIERDSGLI--SFTTRLLVPTSRI 381
D + T++ + A I+ ++ R Q + D GL + T L++P++++
Sbjct: 166 GLPDRMCTLTGNPQAIERAKALIDRIIERGQ---GPAVGSDGGLGDGNTTIELMIPSNKV 222
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
G +IGKGG +I +++ +A ++++ ++ + D+ +++SGD K A
Sbjct: 223 GLVIGKGGEMIKKLQE--RAGVKMVMIQDA-TTSGTSDKPLRVSGDPQKCKHA 272
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 68/150 (45%), Gaps = 16/150 (10%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN-AFE 103
+ L P +G +IGRGG+++K+++ +T ++I+ S ER+ + + D+ + A E
Sbjct: 332 FEMLVPRFAVGIVIGRGGDMIKKIQNETGARIQFRPDDGHSPERLAVISGSDDKIDHARE 391
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRG---------------DEDSDGGHQVTAKLLVPS 148
D+ + A+ + + G + VPS
Sbjct: 392 KIDELIDSARQKDEQRRQGGGRDRGFGPPPHREGGRGGGGGGFRGGPPDRMDSTTFTVPS 451
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
+ G VIGKGG+ ++NI ++GA + + ++
Sbjct: 452 SKCGLVIGKGGETIRNINMQSGAHVELSRN 481
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 134/302 (44%), Gaps = 52/302 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E S ER+VT+ ++ F
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITGPTE--GIFR-- 73
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F AQ K + + A + S VT +L+ P Q G +IGKGG ++ I
Sbjct: 74 -AFSMIAQ----KFEEDITAAMTNSNVTSKP--PVTLRLVFPGSQCGSLIGKGGSKIKEI 126
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL-- 223
R TGAQ+++ D LP R+ V ISG + + + I S + ++P + +
Sbjct: 127 RETTGAQVQVAGD-MLPDSTERA---VTISGTPQAITQCVRHICSVMLESPPKGATIPYR 182
Query: 224 -------ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
A A+ S+ + P G Y D ++ P
Sbjct: 183 PKILPAGAHAVLAPQHSAHAFAIP-------------GQYAFAHQDLTKLHQLAMQHIPL 229
Query: 277 DDL------------SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
L S+ + L P IG +IG+ G+ IN+IRQ SGA IK+ +S+T
Sbjct: 230 PSLGQSNPTFPGLDSSASTSTQELAIPNDLIGCIIGRQGSKINEIRQVSGAHIKI-ASAT 288
Query: 325 EG 326
+G
Sbjct: 289 DG 290
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----------TEGDDCLIT 332
+LRL+ +G +IGK G + ++R+ESGA I + S TEG +
Sbjct: 17 LTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSSPERIVTITGPTEGIFRAFS 76
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ +++F ED +A + V +P T RL+ P S+ G LIGKGGS I
Sbjct: 77 MIAQKFEEDITAAMTNSNVTSKP-------------PVTLRLVFPGSQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRI 405
E+R T A +++
Sbjct: 124 KEIRETTGAQVQV 136
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 81/188 (43%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
SDG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I S + +
Sbjct: 9 SDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINI-------SEGSSPERI 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + +A IA + ++ + +A++NS+ +S V
Sbjct: 62 VTITGPTEGIFRAFSMIAQKFEED-------ITAAMTNSNVTSKPPV------------- 101
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 102 ---------------------------------TLRLVFPGSQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 TTGAQVQV 136
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
DS + T L +P IGC+IG+ GS I E+R+++ A+I+I
Sbjct: 243 DSSASTSTQELAIPNDLIGCIIGRQGSKINEIRQVSGAHIKI 284
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 141/313 (45%), Gaps = 58/313 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTD-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGD-------EDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A+FK +IA + D + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFA-MIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 117 GSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Query: 219 ------------SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGD 266
+ + A + + ++ P T + +A P+ G T
Sbjct: 173 GATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPL-GQTTPA 231
Query: 267 W---SRSLYSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
+ L+S+ D S + L P IG +IG+ G IN+IRQ S
Sbjct: 232 FPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMS 291
Query: 314 GAAIKVDSSSTEG 326
GA IK+ +++TEG
Sbjct: 292 GAQIKI-ANATEG 303
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 85/188 (45%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I+NS S+S + T+ P+
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------ITNSMSNSTA----TSKPPV----- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 174 AT----IPYRP 180
>gi|345485197|ref|XP_003425215.1| PREDICTED: far upstream element-binding protein 1-like isoform 2
[Nasonia vitripennis]
Length = 751
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/380 (21%), Positives = 163/380 (42%), Gaps = 57/380 (15%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED-----GDKFVSP 111
+IGRGGE + +L+ +T KI++ G ER T+ + D N ++ ++ V P
Sbjct: 92 VIGRGGEQITRLQSETGCKIQMAAESGGMPERTCTLTGSRDAVNRAKELVQSIVNQRVKP 151
Query: 112 AQDALFKVHDRVIAEELRGDEDSD----GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
+D + + GH ++++P ++G +IGKGG+ ++ ++
Sbjct: 152 GEDLIPGANPPYPGPASSASSSVTASILAGHPGFVEIMIPGPKVGLIIGKGGETIKQLQE 211
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA-------LCQIASRLHDNPSRSQ 220
++GA++ +++D ++ ++I+G+ V+ A + + +L++ +R+
Sbjct: 212 KSGAKMVVIQD----GPGQEQEKPLRITGDPQKVEHAKQLVYELIAEKEMQLYNRGTRNF 267
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
S + +S SG G+ YG ++G+ + +S P
Sbjct: 268 SSNNSFSQDGNSESGEDRRGN------GVTGRPSEYGSWEGNRPAGEGKVEFSYP----- 316
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITV------ 333
P G +IGKGG I +I Q++GA ++D + D D T+
Sbjct: 317 ---------VPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGTDTDKFFTIRGTPEQ 367
Query: 334 --SSKEFFEDTLSATIEAVVRLQP--RCSE----KIERDSGLISFTTRLLVPTSRIGCLI 385
+K F + L + + P R +E + R + T VPT++ G +I
Sbjct: 368 VEHAKRVFAEKLGGGMGSSSNGYPTGRPNEYGGWDVNRQGNKVEVT--YPVPTNKCGIII 425
Query: 386 GKGGSIITEMRRLTKANIRI 405
GKGG I ++ + T A+ +
Sbjct: 426 GKGGETIKQINQQTGAHCEL 445
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 78/194 (40%), Gaps = 48/194 (24%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+ Y P K G IIG+GG +K++ T + + PG+ D
Sbjct: 313 FSYPVPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGT------------------D 354
Query: 105 GDKFV----SPAQDALFKVHDRVIAEELR-------------------GDEDSDGGHQVT 141
DKF +P Q K RV AE+L G + + G++V
Sbjct: 355 TDKFFTIRGTPEQVEHAK---RVFAEKLGGGMGSSSNGYPTGRPNEYGGWDVNRQGNKVE 411
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
VP+++ G +IGKGG+ ++ I +TGA + D P +++ I G V
Sbjct: 412 VTYPVPTNKCGIIIGKGGETIKQINQQTGAHCEL--DRRNPGT--ETEKFFTIKGTPEQV 467
Query: 202 KKALCQIASRLHDN 215
+ A + +L +N
Sbjct: 468 EHAQRIFSEKLGNN 481
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/177 (21%), Positives = 83/177 (46%), Gaps = 29/177 (16%)
Query: 297 GVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVS------SKEFFEDTLSATIE 348
GVIG+GG I +++ E+G I++ +S C +T S +KE + ++ ++
Sbjct: 91 GVIGRGGEQITRLQSETGCKIQMAAESGGMPERTCTLTGSRDAVNRAKELVQSIVNQRVK 150
Query: 349 AVVRLQPRCSEKIERD-------------SGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
L P + +G F +++P ++G +IGKGG I ++
Sbjct: 151 PGEDLIPGANPPYPGPASSASSSVTASILAGHPGFV-EIMIPGPKVGLIIGKGGETIKQL 209
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGD---LDLAKDALIQVMTRLRANLFDR 449
+ + A + ++ ++ P E ++ ++I+GD ++ AK + +++ L++R
Sbjct: 210 QEKSGAKMVVI--QDGP--GQEQEKPLRITGDPQKVEHAKQLVYELIAEKEMQLYNR 262
>gi|396578132|ref|NP_001257527.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 1
[Rattus norvegicus]
gi|149019899|gb|EDL78047.1| similar to IGF-II mRNA-binding protein 2 (predicted) [Rattus
norvegicus]
Length = 592
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 181/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 186 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 245
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + +V K+L + +G +IGK G
Sbjct: 246 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 287
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 288 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTIEACASAEMEIMKKLREAFEND 345
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A +P P+ + G + +
Sbjct: 346 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPSPPYHPFATHSGYFSSLYPH 405
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 406 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 463
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 464 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 516
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 517 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 551
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 418 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 476
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 477 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 521
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 522 GKTVNELQNLTSAEVIVPRDQ 542
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 422 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 477
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 478 QFKAQGRIFGKLKEENFFN 496
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 141/304 (46%), Gaps = 41/304 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P + +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 223 -------LASAISNSHSSSGSLVGP--------TAATPIVGIAPLMGPYGGYKGDT---- 263
+ A +++ G P A PL + G+
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLH 271
Query: 264 AGDWSRSLYSAPRD-DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ + +++L D S + L P IG +IG+ G IN+IRQ SGA IK+ ++
Sbjct: 272 SSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-AN 330
Query: 323 STEG 326
+TEG
Sbjct: 331 ATEG 334
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 32/212 (15%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
A + P PV G + + + H
Sbjct: 206 ATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 237
>gi|354484186|ref|XP_003504271.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Cricetulus griseus]
Length = 487
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 165/378 (43%), Gaps = 69/378 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 124 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 183
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + ED+ +V K+L + +G +IGK G
Sbjct: 184 -------------EAC-----RMILEIMQKEAEDTKLAEEVPLKILAHNGLVGRLIGKEG 225
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 226 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTIDACANAEMEIMKKLRE--AFE 281
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA NSHS G + +S P +
Sbjct: 282 NDMLAV---NSHS---------------------GYFPNMYPHHHFGPFPHHHSYPEQE- 316
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 317 -----TVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 365
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 366 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 422
Query: 395 MRRLTKANIRILPKENLP 412
++ LT A + I+P++ P
Sbjct: 423 LQNLTSAEV-IVPRDQTP 439
Score = 45.8 bits (107), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 313 PEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 371
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 372 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 416
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 417 GKTVNELQNLTSAEVIVPRDQ 437
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 84/203 (41%), Gaps = 41/203 (20%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS---STEGDDCLITV 333
D ++E L+++ +G +IGK G + +I E+G I + S S + ITV
Sbjct: 199 DTKLAEEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITV 258
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF----------------------- 370
T+ A A + + + E E D ++
Sbjct: 259 KG------TIDACANAEMEIMKKLREAFENDMLAVNSHSGYFPNMYPHHHFGPFPHHHSY 312
Query: 371 ----TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G
Sbjct: 313 PEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITG 368
Query: 427 DLDLAKDALIQVMTRLR-ANLFD 448
+ A ++ +L+ N F+
Sbjct: 369 PPEAQFKAQGRIFGKLKEENFFN 391
>gi|335289843|ref|XP_003127279.2| PREDICTED: RNA-binding protein Nova-2 [Sus scrofa]
Length = 492
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 109/231 (47%), Gaps = 24/231 (10%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 23 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 74
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQV 140
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 75 YPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAK 131
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 132 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 188
Query: 201 VKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 189 VHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 239
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|2673961|gb|AAB88661.1| astrocytic NOVA-like RNA-binding protein [Homo sapiens]
Length = 498
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 24/232 (10%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 28 TKRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 79
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 80 FYPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 136
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 137 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 193
Query: 200 VVKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 194 QVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 245
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 38 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 97
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 98 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 155
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 156 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 207
>gi|291415485|ref|XP_002723980.1| PREDICTED: neuro-oncological ventral antigen 2 [Oryctolagus
cuniculus]
Length = 492
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 24/232 (10%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 22 TKRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 130
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 131 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 187
Query: 200 VVKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 188 QVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 239
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|164655395|ref|XP_001728827.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
gi|159102713|gb|EDP41613.1| hypothetical protein MGL_3994 [Malassezia globosa CBS 7966]
Length = 382
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 130/281 (46%), Gaps = 33/281 (11%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P V R L IIG+ G + ++R + +++ I E++P + ER++TV A D
Sbjct: 82 PGPIVMRALIITSDASVIIGKQGRHINEIRELSNARLNISESIPSNPERILTVSGALD-- 139
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A F + R I +E G + + ++P+ ++G +IG+ G
Sbjct: 140 ------------AVSKAFGLLVRRINDEPFDQPSLPGSRAASIRFIIPNSRMGAIIGRQG 187
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR- 218
++ I+ +GA++ + LP ++ ++ I+G A + A+ + + L ++P R
Sbjct: 188 SKIKEIQEASGARLHA-GETMLPGS---TERILSITGVADALHIAVYYVGATLLEHPDRG 243
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
S +L + + + + SLVG +PL P +A + ++L S
Sbjct: 244 SNNLPYRPAAVNRALTPSLVG----------SPLNSPSASMLALSATNSPKALASVLTPG 293
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
L +++ + P +G +IGKGG IN+IRQ S + IK+
Sbjct: 294 LQTQQ----IFIPNDLVGCIIGKGGQKINEIRQLSASHIKI 330
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 38/231 (16%)
Query: 26 RRYTGDDRDQ-FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VP 83
RR + DQ + G R++ P ++G+IIGR G +K+++ + +++ GET +P
Sbjct: 150 RRINDEPFDQPSLPGSRAASIRFIIPNSRMGAIIGRQGSKIKEIQEASGARLHAGETMLP 209
Query: 84 GSEERVVTVYSASDETN---------AFEDGDKFVS--PAQDALFKVHDRVIAEELRGDE 132
GS ER++++ +D + E D+ + P + A +R + L G
Sbjct: 210 GSTERILSITGVADALHIAVYYVGATLLEHPDRGSNNLPYRPAAV---NRALTPSLVGSP 266
Query: 133 DSDGGHQV---------------------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
+ + T ++ +P+D +GC+IGKGGQ + IR + +
Sbjct: 267 LNSPSASMLALSATNSPKALASVLTPGLQTQQIFIPNDLVGCIIGKGGQKINEIRQLSAS 326
Query: 172 QIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
I+I+ ++ + + S+ LV I+G ++ A+ + RL R H
Sbjct: 327 HIKIMERNAGIAAGGSGSERLVTITGPPPNIQMAVTLLYQRLEQEKMRLAH 377
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 58/109 (53%), Gaps = 9/109 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGK G IN+IR+ S A + + S + ++TVS D +S +VR R
Sbjct: 99 IIGKQGRHINEIRELSNARLNISESIPSNPERILTVSGAL---DAVSKAFGLLVR---RI 152
Query: 358 S-EKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ E ++ S G + + R ++P SR+G +IG+ GS I E++ + A +
Sbjct: 153 NDEPFDQPSLPGSRAASIRFIIPNSRMGAIIGRQGSKIKEIQEASGARL 201
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 27/36 (75%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
T ++ +P +GC+IGKGG I E+R+L+ ++I+I+
Sbjct: 296 TQQIFIPNDLVGCIIGKGGQKINEIRQLSASHIKIM 331
>gi|119577801|gb|EAW57397.1| neuro-oncological ventral antigen 2 [Homo sapiens]
Length = 556
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 24/232 (10%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 86 TKRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 137
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 138 FYPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 194
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 195 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 251
Query: 200 VVKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 252 QVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 303
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 96 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 155
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 156 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 213
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 214 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 265
>gi|395854336|ref|XP_003799652.1| PREDICTED: RNA-binding protein Nova-2, partial [Otolemur garnettii]
Length = 487
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 24/232 (10%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 17 TKRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 68
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 69 FYPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 125
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 126 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 182
Query: 200 VVKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 183 QVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 234
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 27 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 86
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 87 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 144
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 145 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 196
>gi|350591798|ref|XP_003483335.1| PREDICTED: replication factor C (activator 1) 4, 37kDa [Sus scrofa]
Length = 578
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 188/417 (45%), Gaps = 62/417 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 172 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 231
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 232 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 273
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 274 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFEND 331
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 332 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 386
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 387 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 444
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 445 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 497
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 498 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 550
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 404 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 462
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 463 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 507
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 508 GKTVNELQNLTSAEVIVPRDQ 528
>gi|332215029|ref|XP_003256639.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Nomascus leucogenys]
Length = 536
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 186/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 189
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 190 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 231
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 232 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 289
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 290 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 349
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 350 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 407
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 408 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 460
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 461 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 508
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 362 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 420
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 421 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 465
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 466 GKTVNELQNLTSAEVIVPRDQ 486
>gi|307110043|gb|EFN58280.1| hypothetical protein CHLNCDRAFT_142255 [Chlorella variabilis]
Length = 306
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 93/177 (52%), Gaps = 10/177 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P +TVYR + + IIGRGG V+Q+ T +++ + PG+ E+VV V++++ E
Sbjct: 101 PRETVYRLVLDVVDTALIIGRGGNTVRQIEQTTGGRVKRLQEPPGAREQVVVVWNSAREL 160
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ G + AQ+AL RV+ + E++ G ++A+LL+ Q V+
Sbjct: 161 PS--PGRMARNTAQEALVDCVRRVVFQ-----ENAPMGQPMSARLLISRTQEAGVMDNMN 213
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
IV G I + + + LP+CAL +D LV++SGE + A+ ++ L ++P
Sbjct: 214 AIVAE---NPGISIELKRAQELPACALDNDVLVELSGEKYSLLAAVEALSHVLREHP 267
Score = 38.9 bits (89), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 86/195 (44%), Gaps = 16/195 (8%)
Query: 257 GGYKGDTAG---DWSRSLYSAPRDDLS-SKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
G Y+G AG D R + P S +E RLV V + +IG+GG + QI Q
Sbjct: 73 GSYQGTAAGYATDAKRQHVAPPLTPASVPRETVYRLVLDVVDTALIIGRGGNTVRQIEQT 132
Query: 313 SGAAIKVDSSSTEGDDCLITV--SSKEFFEDTLSA---TIEAVVRLQPRCSEKIERDSGL 367
+G +K + ++ V S++E A EA+V R + G
Sbjct: 133 TGGRVKRLQEPPGAREQVVVVWNSARELPSPGRMARNTAQEALVDCVRRVVFQENAPMGQ 192
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
+ RLL+ ++ ++ +I+ E ++ I + + LP A ++D +V++SG+
Sbjct: 193 -PMSARLLISRTQEAGVMDNMNAIVAENPGIS---IELKRAQELPACALDNDVLVELSGE 248
Query: 428 ---LDLAKDALIQVM 439
L A +AL V+
Sbjct: 249 KYSLLAAVEALSHVL 263
>gi|329663502|ref|NP_001193038.1| RNA-binding protein Nova-2 [Bos taurus]
Length = 492
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 24/232 (10%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 22 TKRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 130
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 131 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 187
Query: 200 VVKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 188 QVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 239
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 50/307 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDW 267
S + A +++ G P T + +A + G+T +
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTG--F 230
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
S L D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 231 SAGL------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST 284
Query: 328 DCLITVS 334
D +T++
Sbjct: 285 DRQVTIT 291
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|5902724|ref|NP_002507.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|33516944|sp|Q9UNW9.1|NOVA2_HUMAN RecName: Full=RNA-binding protein Nova-2; AltName: Full=Astrocytic
NOVA1-like RNA-binding protein; AltName:
Full=Neuro-oncological ventral antigen 2
gi|3851553|gb|AAC72355.1| RNA-binding protein Nova-2 [Homo sapiens]
gi|195934809|gb|AAI68367.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 492
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 24/232 (10%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 22 TKRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 130
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 131 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 187
Query: 200 VVKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 188 QVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 239
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 146/319 (45%), Gaps = 61/319 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKG 261
S + A +++ G P T + +A P+ G+ G
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSG 232
Query: 262 ------DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
D G W+ D S++ S L P IG +IG+ GA IN+IRQ SGA
Sbjct: 233 VESSSPDEKGYWAGL-------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 285
Query: 316 AIKVDSSSTEGDDCLITVS 334
IK+ + D +T++
Sbjct: 286 QIKIANPVEGSTDRQVTIT 304
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS +SS V
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNSTASSRPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 193/426 (45%), Gaps = 58/426 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + G+ E+ +T+Y + T
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 245
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + K + Q + + S G +++ ++L ++ IG +IGKGG
Sbjct: 246 NACK---KIMEVTQQEAYGL--------------SKG--EISLRILAHNNLIGRIIGKGG 286
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + + L + ++ + G + KA I+S+L ++N
Sbjct: 287 TTIKKIMQDTDTKITVSSINDINNFNL--ERIITVKGSIDNMSKAESMISSKLRQSYEND 344
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q L+ + S + +G ++ P + G P PY G
Sbjct: 345 LQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGTGPAPYPYQTSLPTQQG------- 397
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P ++G +IG G+ I I + SGA++K+ + E D
Sbjct: 398 -IPIGDTQETAF---LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI--APIEQDK---P 448
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
V + + T+ + E+ + Q EK+ R+ G + T +LVP++++G +IG
Sbjct: 449 VEQQNDRKVTIVGSPESQWKAQYLIFEKM-REEGFVGGTEDVRLTIEILVPSTQVGRIIG 507
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGG + E++R+T + I++ +++ A E + VQI G + A R+RA +
Sbjct: 508 KGGQNVRELQRVTGSIIKLSEQQSTSPSADE-EATVQIIGPFFSVQSA----QRRIRAMV 562
Query: 447 FDREGA 452
GA
Sbjct: 563 LQSSGA 568
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG--DDCLITVSSKEFFE 340
+F LR++ +G +IG+ G+ I QI Q + A + V + G + + + E
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 245
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
+ +E + E G IS R+L + IG +IGKGG+ I ++ + T
Sbjct: 246 NACKKIMEVTQQ------EAYGLSKGEISL--RILAHNNLIGRIIGKGGTTIKKIMQDTD 297
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVL 460
I + ++ E ++ + G +D A + ++LR + + A++ +
Sbjct: 298 TKITVSSINDINNFNLE--RIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMF 355
Query: 461 PYI-PVSENGSDGLNYESRDSKRHGRGP-PY 489
P + P++ + G+ Y SR +G GP PY
Sbjct: 356 PGLHPMAMMSTAGMGYSSRGPGLYGTGPAPY 386
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 84/172 (48%), Gaps = 29/172 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + V +R VT+ +
Sbjct: 404 QETAFLYI-PNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGS 462
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIG 152
+ AQ +F E++R +E GG + +T ++LVPS Q+G
Sbjct: 463 PESQ----------WKAQYLIF--------EKMR-EEGFVGGTEDVRLTIEILVPSTQVG 503
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
+IGKGGQ V+ ++ TG+ I+ L ++ S + + VQI G V+ A
Sbjct: 504 RIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVQIIGPFFSVQSA 554
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 50/307 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDW 267
S + A +++ G P T + +A + G+T +
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTG--F 230
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
S L D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 231 SAGL------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST 284
Query: 328 DCLITVS 334
D +T++
Sbjct: 285 DRQVTIT 291
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|291219869|ref|NP_001025048.2| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 492
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 24/232 (10%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 22 TKRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 130
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 131 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 187
Query: 200 VVKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 188 QVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 239
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
>gi|281354032|gb|EFB29616.1| hypothetical protein PANDA_003725 [Ailuropoda melanoleuca]
Length = 434
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 61/404 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 58 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 117
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 118 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 159
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 160 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFEND 217
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 218 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 272
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 273 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 330
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 331 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 383
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
S G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 384 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 423
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 290 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 348
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 349 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 393
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 394 GKTVNELQNLTSAEVIVPRDQ 414
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/283 (28%), Positives = 136/283 (48%), Gaps = 24/283 (8%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS-RSQHLLA 224
R TGAQ+++ D LP+ R+ V ISG + + + QI + + + + Q+ +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIP 211
Query: 225 SA-ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKE 283
++ H L P +G P ++ + + + D S
Sbjct: 212 HPDLTKLH----QLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPA 267
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
+ L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 268 STHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 309
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 43/173 (24%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 191
Query: 100 --------NAFEDGDKFVSPAQDALFKVHDRVIAEE------------------LRGDED 133
A+ ++ P D L K+H + + L E+
Sbjct: 192 KQICVVMLEAYTIQGQYAIPHPD-LTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 250
Query: 134 SDG-----------GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+ T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 251 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 303
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 30/175 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE 200
>gi|396578134|ref|NP_001257528.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 2
[Rattus norvegicus]
Length = 524
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 181/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 118 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 177
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + +V K+L + +G +IGK G
Sbjct: 178 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 219
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 220 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTIEACASAEMEIMKKLREAFEND 277
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A +P P+ + G + +
Sbjct: 278 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPSPPYHPFATHSGYFSSLYPH 337
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 338 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 395
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 396 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 448
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 449 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 483
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 350 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 408
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 409 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 453
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 454 GKTVNELQNLTSAEVIVPRDQ 474
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 354 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 409
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 410 QFKAQGRIFGKLKEENFFN 428
>gi|332215027|ref|XP_003256638.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Nomascus leucogenys]
Length = 599
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 180/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 412
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 413 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 470
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 471 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|109042328|ref|XP_001095336.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 5 [Macaca mulatta]
gi|402860699|ref|XP_003894760.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Papio anubis]
Length = 599
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 180/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 412
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 413 HQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 470
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 471 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + ++I++ E PG+ +R++ V A +E
Sbjct: 36 TYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEI 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
Q A+ + ++++E L ++D+D + +L+VP+ G +IGKGG
Sbjct: 96 -------------QRAVELILSKLLSE-LHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGG 141
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+++ ++ A I+I ++ + ++D LV ++G +A+ I S+L ++P +
Sbjct: 142 ATIRSFIEDSQAGIKISPQDN--NYYGQNDRLVTLTGSFDEQMRAIELIVSKLSEDPHYA 199
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
Q ++++ S G P + P + P A ++ + + +
Sbjct: 200 Q-----SMNSPFSYPGVYFSGYQGVPYTYVLPSVAP----PAYNAVNYRPNGAAGGKLQN 250
Query: 280 SSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKV 319
S +E S L VA+ IG V+G+GG I +I Q SGA IK+
Sbjct: 251 SKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQASGARIKI 292
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+P D K +R + + G VIGKGG+ I + +SGA I++ +
Sbjct: 26 SPSLDSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRN----------- 74
Query: 334 SSKEFFEDT------LSATIEAVVR-----LQPRCSEKIERDSGLISFTT--RLLVPTSR 380
EFF T +S I + R L SE D T RL+VP
Sbjct: 75 --HEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGS 132
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
G +IGKGG+ I ++A I+I P++N ++D +V ++G D A+ +++
Sbjct: 133 CGGIIGKGGATIRSFIEDSQAGIKISPQDN--NYYGQNDRLVTLTGSFDEQMRAIELIVS 190
Query: 441 RL 442
+L
Sbjct: 191 KL 192
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 94/213 (44%), Gaps = 66/213 (30%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
+ LV + G VIGKGG + + +S++GA+I++ ++ E P +D ++ +SG + +
Sbjct: 39 RFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGT---TDRIIMVSGAINEI 95
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
++A+ + +L+ +S HS
Sbjct: 96 QRAV--------------ELILSKLLSELHSED--------------------------- 114
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-- 319
D+ + + +RLV P + GG+IGKGGA I ++S A IK+
Sbjct: 115 ---------------DNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISP 159
Query: 320 -DSSSTEGDDCLITVSSKEFFEDTLSATIEAVV 351
D++ +D L+T++ F++ + A IE +V
Sbjct: 160 QDNNYYGQNDRLVTLTGS--FDEQMRA-IELIV 189
>gi|397470081|ref|XP_003806662.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Pan paniscus]
gi|179479866|gb|ACB86625.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 542
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 186/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 136 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 195
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 196 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 237
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 238 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 295
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 296 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPH 355
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 356 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 413
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 414 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 466
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 514
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 368 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 426
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 427 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 471
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 472 GKTVNELQNLTSAEVIVPRDQ 492
>gi|392337608|ref|XP_001075246.3| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 560
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 24/232 (10%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 107 TKRINTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 158
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 159 FYPGTTERVCLVQGTAEALNA---AHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 215
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 216 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 272
Query: 200 VVKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 273 QVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 324
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 117 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 176
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 177 L--NAAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 234
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 235 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 286
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 144/307 (46%), Gaps = 50/307 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDW 267
S + A +++ G P T + +A + G+T +
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTG--F 230
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
S L D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 231 SAGL------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGST 284
Query: 328 DCLITVS 334
D +T++
Sbjct: 285 DRQVTIT 291
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 140/288 (48%), Gaps = 34/288 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS-RSQHLLA 224
R TGAQ+++ D LP+ R+ V ISG + + + QI + + + + Q+ +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIP 211
Query: 225 SA-ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT----AGDWSRSLYSAPRD-D 278
++ H + TP PL + G+ + + +++L D
Sbjct: 212 HPDLTKLHQLA------MQQTP---FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLD 262
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 263 ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 309
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 43/173 (24%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 132 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 191
Query: 100 --------NAFEDGDKFVSPAQDALFKVHDRVI--------------------------- 124
A+ ++ P D L K+H +
Sbjct: 192 KQICVVMLEAYTIQGQYAIPHPD-LTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 250
Query: 125 AEELRGDEDS-DGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
A+ L G D T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 251 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 303
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 30/175 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE 200
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 194/429 (45%), Gaps = 58/429 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + G+ E+ +T+Y + T
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 245
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + K + Q + + S G +++ ++L ++ IG +IGKGG
Sbjct: 246 NACK---KIMEVTQQEAYGL--------------SKG--EISLRILAHNNLIGRIIGKGG 286
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + + L + ++ + G + KA I+S+L ++N
Sbjct: 287 TTIKKIMQDTDTKITVSSINDINNFNL--ERIITVKGSIDNMSKAESMISSKLRQSYEND 344
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q L+ + S + +G ++ P + G P PY G
Sbjct: 345 LQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQTSLPTQQG------- 397
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P ++G +IG G+ I I + SGA++K+ + E D
Sbjct: 398 -IPIGDTQETAF---LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI--APIEQDK---P 448
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
V + + T+ + E+ + Q EK+ R+ G + T +LVP++++G +IG
Sbjct: 449 VEQQNDRKVTIVGSPESQWKAQYLIFEKM-REEGFVGGTEDVRLTIEILVPSTQVGRIIG 507
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGG + E++R+T + I++ +++ A E + VQI G + A R+RA +
Sbjct: 508 KGGQNVRELQRVTGSIIKLSEQQSTSPSADE-EATVQIIGPFFSVQSA----QRRIRAMV 562
Query: 447 FDREGAVST 455
GA T
Sbjct: 563 LQSSGAPGT 571
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG--DDCLITVSSKEFFE 340
+F LR++ +G +IG+ G+ I QI Q + A + V + G + + + E
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 245
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
+ +E + E G IS R+L + IG +IGKGG+ I ++ + T
Sbjct: 246 NACKKIMEVTQQ------EAYGLSKGEISL--RILAHNNLIGRIIGKGGTTIKKIMQDTD 297
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVL 460
I + ++ E ++ + G +D A + ++LR + + A++ +
Sbjct: 298 TKITVSSINDINNFNLE--RIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMF 355
Query: 461 PYI-PVSENGSDGLNYESRDSKRHGRGP-PY 489
P + P++ + G+ Y SR +G GP PY
Sbjct: 356 PGLHPMAMMSTAGMGYSSRGPGLYGSGPAPY 386
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 29/172 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + V +R VT+
Sbjct: 404 QETAFLYI-PNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVG- 461
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIG 152
SP ++ +K +I E++R +E GG + +T ++LVPS Q+G
Sbjct: 462 --------------SP--ESQWKAQ-YLIFEKMR-EEGFVGGTEDVRLTIEILVPSTQVG 503
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
+IGKGGQ V+ ++ TG+ I+ L ++ S + + VQI G V+ A
Sbjct: 504 RIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVQIIGPFFSVQSA 554
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 195/426 (45%), Gaps = 58/426 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + G+ E+ +T+Y + T
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 245
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + K + Q + + S G +++ ++L ++ IG +IGKGG
Sbjct: 246 NACK---KIMEVTQQEAYGL--------------SKG--EISLRILAHNNLIGRIIGKGG 286
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + + L + ++ + G + KA I+++L ++N
Sbjct: 287 TTIKKIMQDTDTKITVSSINDINNFNL--ERIITVKGSIDNMSKAESMISNKLRQSYEND 344
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q L+ + S + +G ++ P + G P PY G
Sbjct: 345 LQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQASLPTQQG------- 397
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P ++G +IG G+ I I + SGA++K+ + E D +
Sbjct: 398 -IPIGDTQETAF---LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI--APIEQDKPVDQ 451
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
+ ++ T+ + E+ + Q EK+ R+ G ++ T +LVP++++G +IG
Sbjct: 452 QNDRKV---TIVGSPESQWKAQYLIFEKM-REEGFVAGTEDVRLTIEILVPSTQVGRIIG 507
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGG + E++R+T + I++ +++ A E + VQI G + A R+RA +
Sbjct: 508 KGGQNVRELQRVTGSIIKLSEQQSTSPSADE-EATVQIIGPFFSVQSA----QRRIRAMV 562
Query: 447 FDREGA 452
GA
Sbjct: 563 LQSSGA 568
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 14/211 (6%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG--DDCLITVSSKEFFE 340
+F LR++ +G +IG+ G+ I QI Q + A + V + G + + + E
Sbjct: 186 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 245
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
+ +E + E G IS R+L + IG +IGKGG+ I ++ + T
Sbjct: 246 NACKKIMEVTQQ------EAYGLSKGEISL--RILAHNNLIGRIIGKGGTTIKKIMQDTD 297
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVL 460
I + ++ E ++ + G +D A + +LR + + A++ +
Sbjct: 298 TKITVSSINDINNFNLE--RIITVKGSIDNMSKAESMISNKLRQSYENDLQAMAPQSLMF 355
Query: 461 PYI-PVSENGSDGLNYESRDSKRHGRGP-PY 489
P + P++ + G+ Y SR +G GP PY
Sbjct: 356 PGLHPMAMMSTAGMGYSSRGPGLYGSGPAPY 386
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 85/166 (51%), Gaps = 17/166 (10%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
++T + Y+ P +G+IIG G ++ + + + ++I P +++ V D+ N
Sbjct: 404 QETAFLYI-PNTSVGAIIGSKGSHIRNIIRFSGASVKIA---PIEQDKPV------DQQN 453
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGCVIGKG 158
D + + ++ +K +I E++R + G V T ++LVPS Q+G +IGKG
Sbjct: 454 ---DRKVTIVGSPESQWKAQ-YLIFEKMREEGFVAGTEDVRLTIEILVPSTQVGRIIGKG 509
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
GQ V+ ++ TG+ I+ L ++ S + + VQI G V+ A
Sbjct: 510 GQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVQIIGPFFSVQSA 554
>gi|269784927|ref|NP_001161615.1| NOVA-like protein [Saccoglossus kowalevskii]
gi|268054231|gb|ACY92602.1| NOVA-like protein [Saccoglossus kowalevskii]
Length = 516
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 122/256 (47%), Gaps = 50/256 (19%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET- 81
P + G+D +++I+ + L P GS+IG+GG+ V QL+ +T + I++ ++
Sbjct: 33 PKRTNIGGNDDNKYIL-------KMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSN 85
Query: 82 --VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS---DG 136
PG+ ERVV + + A + FV + KV D G+E + +
Sbjct: 86 DYYPGTSERVVLITGTVESLTAVGN---FV------IEKVRDSPQLAAKTGNESAVSQER 136
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
QV K+++P+ G +IGKGG ++ +TG++++I + + S+ ++ ISG
Sbjct: 137 ARQV--KIIIPNSTAGLIIGKGGATIKAFMEQTGSKLQISQKSEGVNL---SERVLTISG 191
Query: 197 EASVVKKALCQIASRLHDNPSR------SQHLLASAISNS------HSSSGSLV------ 238
E KKA+ + S++ ++P S ++ I+N+ + +G LV
Sbjct: 192 EGDANKKAMNAVISKVQEDPQSGSCNNISYAAVSGPIANASPTGSPFAEAGGLVNVKQPQ 251
Query: 239 -----GPTAATPIVGI 249
GPTA P +G+
Sbjct: 252 MSLHTGPTAGMPTMGV 267
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST----EGDDCLITVSSKE 337
++ L+++ P A G VIGKGG + Q+++E+GA IK+ S+ + ++ + E
Sbjct: 44 NKYILKMLIPSAAAGSVIGKGGQTVVQLQRETGANIKLSKSNDYYPGTSERVVLITGTVE 103
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTR---LLVPTSRIGCLIGKGGSIITE 394
+ IE VR P+ + K +S + R +++P S G +IGKGG+ I
Sbjct: 104 SLTAVGNFVIEK-VRDSPQLAAKTGNESAVSQERARQVKIIIPNSTAGLIIGKGGATIKA 162
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T + ++I K ++ + ++ ISG+ D K A+ V+++++
Sbjct: 163 FMEQTGSKLQISQKSEGVNLS---ERVLTISGEGDANKKAMNAVISKVQ 208
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/313 (27%), Positives = 145/313 (46%), Gaps = 49/313 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKG 261
S + A +++ G P T + +A P+ G+ G
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSG 232
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ Y A D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 233 IESSSPEVKGYWAGLDA-SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIAN 291
Query: 322 SSTEGDDCLITVS 334
D +T++
Sbjct: 292 PVEGSTDRQVTIT 304
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 89/227 (39%), Gaps = 64/227 (28%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 94 ---------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
S F G + Q A L K+H + +
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 219
Query: 128 ----------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNI 165
G E S D Q T+ +L +P+D IGC+IG+ G + I
Sbjct: 220 HFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEI 279
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
R +GAQI+I +D V I+G A+ + A I RL
Sbjct: 280 RQMSGAQIKIANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 321
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 138/288 (47%), Gaps = 34/288 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPSRSQHLLA 224
R TGAQ+++ D LP+ R+ V ISG + + + QI L + Q+ +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIP 179
Query: 225 SA-ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT----AGDWSRSLYSAPRD-D 278
++ H + TP PL + G+ + + +++L D
Sbjct: 180 HPDLTKLHQLA------MQQTP---FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLD 230
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
S + L P IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 231 ASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 277
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 75/173 (43%), Gaps = 43/173 (24%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 100 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 159
Query: 100 --------NAFEDGDKFVSPAQDALFKVHDRVI--------------------------- 124
A+ ++ P D L K+H +
Sbjct: 160 KQICVVMLEAYTIQGQYAIPHPD-LTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 218
Query: 125 AEELRGDEDS-DGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
A+ L G D T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 219 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 271
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 32/176 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLE 168
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/318 (25%), Positives = 141/318 (44%), Gaps = 73/318 (22%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GEIVK+ R ++ +KI I + ER+VTV S
Sbjct: 31 KEVGSIIGKKGEIVKRFREESGAKINISDC--SCPERIVTV-----------------SG 71
Query: 112 AQDALFKVHDRVIAE------ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
++ A++K + + + + + ++ G Q+ +L+VP+ Q G +IGKGG ++ I
Sbjct: 72 SRSAIYKAFTLITKKFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEI 131
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL--- 222
R TG I++ E LP+ R+ V +SG A + + + I + ++P + +
Sbjct: 132 REITGCSIQV-ASEMLPNSTERA---VTLSGSAEAITQCIYHICCVMLESPPKGATIPYR 187
Query: 223 --------LASAISNSHSSSGSLVGPTAATPIVGIA--PL------------------MG 254
+ A +++ G+ P A + GIA PL +
Sbjct: 188 PKPQVNGPVIVANGQAYTIQGNYAVP--AQEVSGIAKNPLAGLAALGLAGAIPSNTGGLN 245
Query: 255 PYGGYKGDTAGDW-----------SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
P G Y A ++ S+ + R+ + S + P IG +IGKGG
Sbjct: 246 PTGKYSSPNALEYIPHAALAALAGSQLRTNNNRNVAPVQSQSHEMTVPNDLIGCIIGKGG 305
Query: 304 AIINQIRQESGAAIKVDS 321
I +IRQ SGA I++ +
Sbjct: 306 TKIAEIRQISGAMIRISN 323
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 20/184 (10%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS-SKEFFEDT 342
++RL+ +G +IGK G I+ + R+ESGA I + S + ++TVS S+
Sbjct: 22 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDCSC--PERIVTVSGSRSAIYKA 79
Query: 343 LSATIEAVVRLQPRCSEKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
+ + + + CS+ + + G RL+VP S+ G LIGKGGS I E+R +T
Sbjct: 80 FTLITK---KFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKEIREITG 136
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVL 460
+I++ E LP + + V +SG + +A+ Q + + + + +T +
Sbjct: 137 CSIQVA-SEMLP---NSTERAVTLSG----SAEAITQCIYHICCVMLESPPKGAT----I 184
Query: 461 PYIP 464
PY P
Sbjct: 185 PYRP 188
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ VP IGC+IGKGG+ I E+R+++ A IRI E + + D + I+G+ D
Sbjct: 290 MTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--RDSGNTDRTITITGNPDSV-- 345
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 346 ALAQYLINMRISM 358
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V +
Sbjct: 17 DPAVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDCSCP------ERIVTV 69
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQ 220
SG S + KA I + + S+ Q
Sbjct: 70 SGSRSAIYKAFTLITKKFEEWCSQFQ 95
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++ VP+D IGC+IGKGG + IR +GA IRI E S +D + I+G V
Sbjct: 289 EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERDSG--NTDRTITITGNPDSVA 346
Query: 203 KALCQIASRL 212
A I R+
Sbjct: 347 LAQYLINMRI 356
>gi|355559801|gb|EHH16529.1| hypothetical protein EGK_11818, partial [Macaca mulatta]
Length = 542
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 185/412 (44%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 136 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 195
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 196 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 237
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 238 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 295
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 296 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 355
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 356 HQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 413
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ + + + VP+S G
Sbjct: 414 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEEKFFTPKEEVKLEAHIRVPSSTAGR 466
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 514
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 62/148 (41%), Gaps = 31/148 (20%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTV------ 92
PE V P + +G+IIG+ G +KQL + I+I P ER+V +
Sbjct: 368 PEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 427
Query: 93 -YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQI 151
+ A +KF +P ++ + H RV PS
Sbjct: 428 QFKAQGRIFGKLKEEKFFTPKEEVKLEAHIRV-----------------------PSSTA 464
Query: 152 GCVIGKGGQIVQNIRSETGAQIRILKDE 179
G VIGKGG+ V +++ T A++ + +D+
Sbjct: 465 GRVIGKGGKTVNELQNLTSAEVIVPRDQ 492
>gi|397470077|ref|XP_003806660.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Pan paniscus]
gi|179479906|gb|ACB86626.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 536
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 186/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 130 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 189
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 190 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 231
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 232 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 289
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 290 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPH 349
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 350 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 407
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 408 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 460
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 461 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 508
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 362 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 420
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 421 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 465
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 466 GKTVNELQNLTSAEVIVPRDQ 486
>gi|440901500|gb|ELR52431.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Bos grunniens
mutus]
Length = 600
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 191/427 (44%), Gaps = 72/427 (16%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAITPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S+ ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 456 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 509
Query: 391 I-------------ITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDL--AKDA 434
+ E++ L+ A + ++P++ P E+D+ +V+I+G A
Sbjct: 510 TAIPLNVISVYLLQVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQASPL 565
Query: 435 LIQVMTR 441
L+QV R
Sbjct: 566 LLQVAQR 572
>gi|148223980|ref|NP_001082843.1| uncharacterized protein LOC557028 [Danio rerio]
gi|94732695|emb|CAK10813.1| novel protein similar to human IGF-II mRNA-binding protein 2
(IMP-2) [Danio rerio]
gi|167614340|gb|ABZ89742.1| IGF-II mRNA-binding protein 2b variant 1 [Danio rerio]
gi|167614342|gb|ABZ89743.1| IGF-II mRNA-binding protein 2b variant 2 [Danio rerio]
Length = 436
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 185/418 (44%), Gaps = 62/418 (14%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDET 99
++ R L P + +G+IIG+ G +K + T+SK+ I + G+ E+ +T++S+ +
Sbjct: 27 QELPLRILVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGATEKAITIHSSKE-- 84
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
S A + ++ ++ D+ +V K+L + +G +IGK G
Sbjct: 85 --------GCSQACRMILEIMEK-------EANDTKIVEEVPLKILAHNSLVGRLIGKEG 129
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN- 215
+ ++ I +TG +I I + L + + + G KA +I +L H+N
Sbjct: 130 RNLKKIEQDTGTKITISALQDL--TVYNQERTISVRGGVEECCKAEGEIMKKLREAHEND 187
Query: 216 -PSRSQHLLASAISNSHS----SSGSLVGPTAA-------TPIVGIAPLMGP--YGGYKG 261
S +Q A N + SSG V P A+ TP +PL+GP GG G
Sbjct: 188 VASVNQQTNMMAGLNLSALGIFSSGMSVLPPASGLRGSLSTP-ANYSPLLGPSIMGGLYG 246
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+ SL A ++ + L P +G +IGK G I ++ +GA+IK+ +
Sbjct: 247 -VPSSGALSLQQA-----GGEQEVVYLFIPTPAVGALIGKKGQHIKELAHFAGASIKIAA 300
Query: 322 SSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLV 376
+ + + + ++ EA + Q R K++ ++ + + V
Sbjct: 301 PESPDEPERMVI---------ITGPPEAQFKAQGRIYGKLKEENFFTAKEEVKLEAHIKV 351
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
P++ G +IGKGG + E++ LT A + I+P++ P DD V+I G ++ A
Sbjct: 352 PSTAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENDDVFVKIIGHFFASQTA 406
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASD 97
G ++ VY ++ P +G++IG+ G+ +K+L + I+I P ER+V + +
Sbjct: 260 GEQEVVYLFI-PTPAVGALIGKKGQHIKELAHFAGASIKIAAPESPDEPERMV-IITGPP 317
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E G + ++ F + V ++ A + VPS G VIGK
Sbjct: 318 EAQFKAQGRIYGKLKEENFFTAKEEV---------------KLEAHIKVPSTAAGRVIGK 362
Query: 158 GGQIVQNIRSETGAQIRILKDE 179
GG+ V +++ T A++ + +D+
Sbjct: 363 GGKTVNELQNLTSAEVIVPRDQ 384
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 72/165 (43%), Gaps = 13/165 (7%)
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG--DDCLITVSSKEFF 339
+E LR++ P +G +IGK G I I +++ + + + G + + SSKE
Sbjct: 27 QELPLRILVPTQFVGAIIGKEGLTIKNITKQTQSKVDIHRKENAGATEKAITIHSSKEGC 86
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGLI-SFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
+E + EK D+ ++ ++L S +G LIGK G + ++ +
Sbjct: 87 SQACRMILEIM--------EKEANDTKIVEEVPLKILAHNSLVGRLIGKEGRNLKKIEQD 138
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T I I ++L + + + G ++ A ++M +LR
Sbjct: 139 TGTKITISALQDL--TVYNQERTISVRGGVEECCKAEGEIMKKLR 181
>gi|301759723|ref|XP_002915742.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Ailuropoda melanoleuca]
Length = 599
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 61/404 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 407
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 408 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 465
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 466 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 518
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
S G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 519 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 140/327 (42%), Gaps = 59/327 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGDTAGDWSRSLYSA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
+ D ++ + P D S++ S L P IG +IG+ GA IN
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 295
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVS 334
+IRQ SGA IK+ + D +T++
Sbjct: 296 EIRQMSGAQIKIANPVEGSTDRQVTIT 322
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERII-------TL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|440899520|gb|ELR50813.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Bos grunniens
mutus]
Length = 597
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 61/404 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 191 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 250
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 251 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 292
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 293 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFEND 350
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 351 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 405
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 406 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 463
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 464 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 516
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
S G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 517 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 556
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 423 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 481
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 482 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 526
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 527 GKTVNELQNLTSAEVIVPRDQ 547
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 140/303 (46%), Gaps = 41/303 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-DKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD- 277
+ SSS + A I G + P A S S +
Sbjct: 173 G---VTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNT 229
Query: 278 ------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + +D +
Sbjct: 230 GFSGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQV 289
Query: 332 TVS 334
T++
Sbjct: 290 TIT 292
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 47/178 (26%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 94 ---------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
S F G + Q A L K+H + +
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 219
Query: 128 L-----RGDEDSDGGHQVTAK-----LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
G+ GG +A+ L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 HFPMSHSGNTGFSGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 277
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS +SS V
Sbjct: 60 TLAGPTNAIFKAFSMIIDKLEED-------ISSSMTNSTASSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 143/310 (46%), Gaps = 56/310 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPLSIIECVKQICVVMLESPPK 172
Query: 219 SQHL----------LASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYG---GYKGDTA 264
+ + A +++ G P T + +A P+ +G TA
Sbjct: 173 GVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGFTA 232
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 233 GM-----------DASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 281
Query: 325 EGDDCLITVS 334
D +T++
Sbjct: 282 GSSDRQVTIT 291
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S++SNS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMSNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD-SGLIS---------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D S +S T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|357615456|gb|EHJ69667.1| putative igf2 mRNA binding protein [Danaus plexippus]
Length = 599
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 184/399 (46%), Gaps = 63/399 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L +G+IIGR G ++ + +++++ + + GS E+ +T+Y D
Sbjct: 136 PTDFPLRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNVGSLEKAITIYGNPDN 195
Query: 99 -TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
TNA + I E ++ + ++ ++ K+L ++ IG +IGK
Sbjct: 196 CTNAC-------------------KRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGK 236
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG ++ I ET +I + + S L + ++ + G + KA QI+++L +
Sbjct: 237 GGNTIKRIMQETDTKITVSSINDINSFNL--ERIITVKGTIENMAKAESQISAKLRQSYE 294
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL--MGPYGGYKGDTAGDWSRSLYSAP 275
+LA S++ P G+ P+ M G+ G A AP
Sbjct: 295 NDLQVLAPQ---------SIMFP-------GLHPMAMMSTGRGFCG--APPPFPPPIYAP 336
Query: 276 --------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
+ S+E + L P +G +IG G+ I I + S A++K+ + E D
Sbjct: 337 LAGQGGAQQGAGDSQE-TTYLYIPNNAVGAIIGTKGSHIRNIIRFSNASVKI--APLEQD 393
Query: 328 DCLI-TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSR 380
+ +V++++ + T+ + EA + Q EK+ R+ G +S T ++V +S+
Sbjct: 394 KVIEGSVAAQQERKVTIVGSPEAQWKAQYLIFEKM-REEGFMSGSDDVRLTVAIVVASSQ 452
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDD 419
+G +IGKGG + E++R+T + I+ LP++ P A+ +D
Sbjct: 453 VGRIIGKGGQNVRELQRVTGSLIK-LPEQPQPPTAAGND 490
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 140/327 (42%), Gaps = 59/327 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGDTAGDWSRSLYSA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
+ D ++ + P D S++ S L P IG +IG+ GA IN
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 295
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVS 334
+IRQ SGA IK+ + D +T++
Sbjct: 296 EIRQMSGAQIKIANPVEGSTDRQVTIT 322
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 320
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 321 ITGSAASISLAQYLINVRL 339
>gi|300795407|ref|NP_001179433.1| insulin-like growth factor 2 mRNA-binding protein 2 [Bos taurus]
gi|296491332|tpg|DAA33395.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 1
[Bos taurus]
Length = 599
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/404 (24%), Positives = 182/404 (45%), Gaps = 61/404 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEIEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 407
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 408 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 465
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 466 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 518
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
S G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 519 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|390474894|ref|XP_002758191.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Callithrix jacchus]
Length = 1052
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 186/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 646 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 705
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 706 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 747
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 748 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACACAEIEIMKKLREAFEND 805
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 806 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 865
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 866 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 923
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 924 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 976
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 977 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 1024
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 878 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMV-IITGPPE 936
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 937 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 981
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 982 GKTVNELQNLTSAEVIVPRDQ 1002
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 61/319 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKG 261
S + A +++ G P T + +A P+ G+ G
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSG 232
Query: 262 ------DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
+ G W+ D S++ S L P IG +IG+ GA IN+IRQ SGA
Sbjct: 233 IESSSPEVKGYWAGL-------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 285
Query: 316 AIKVDSSSTEGDDCLITVS 334
IK+ + D +T++
Sbjct: 286 QIKIANPVEGSTDRQVTIT 304
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 59/190 (31%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 94 ---------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
S F G + Q A L K+H + +
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 219
Query: 128 ----------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNI 165
G E S D Q T+ +L +P+D IGC+IG+ G + I
Sbjct: 220 HFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEI 279
Query: 166 RSETGAQIRI 175
R +GAQI+I
Sbjct: 280 RQMSGAQIKI 289
>gi|345796405|ref|XP_535832.3| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 2 [Canis lupus familiaris]
Length = 531
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 188/417 (45%), Gaps = 62/417 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 125 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 184
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 185 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 226
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 227 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACANAEVEIMKKLREAFEND 284
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 285 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 339
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 340 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 397
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 398 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 450
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 451 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 503
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 357 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 415
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 416 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 460
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 461 GKTVNELQNLTSAEVIVPRDQ 481
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 139/326 (42%), Gaps = 74/326 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTD-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVIG 156
A+FK + + +ED + VT +L+VP+ Q G +IG
Sbjct: 67 ---------AIFKAFAMI---AFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIG 114
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++P
Sbjct: 115 KGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGMPDAIIQCVKQICVVMLESP 170
Query: 217 SRSQHL-----LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK-GDTAGDWSRS 270
+ + ASA + A P A L+ YK T+ W
Sbjct: 171 PKGATIPYRPKPASAPVIFAGGQAYTIQGQCAIPHPDDACLLS--AEYKTALTSTLWRSP 228
Query: 271 LYSAPRDDLSSKEF---SLR---------------------------LVCPVANIGGVIG 300
+ P L + SLR L P IG +IG
Sbjct: 229 QLAHPSSQLKEAAWRPESLRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIG 288
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEG 326
+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 289 RQGTKINEIRQMSGAQIKI-ANATEG 313
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
++GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 TEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I+NS ++S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAFKFEED-----------INNSMTNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 26/187 (13%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + + IT + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFK--- 70
Query: 344 SATIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
A + + E I + T RL+VP S+ G LIGKGGS I E+R
Sbjct: 71 -----AFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
T A +++ + LP + + V ISG DA+IQ + ++ + + +T
Sbjct: 126 STGAQVQVA-GDMLP---NSTERAVTISG----MPDAIIQCVKQICVVMLESPPKGAT-- 175
Query: 458 PVLPYIP 464
+PY P
Sbjct: 176 --IPYRP 180
>gi|242093092|ref|XP_002437036.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
gi|241915259|gb|EER88403.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
Length = 319
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 83/162 (51%), Gaps = 20/162 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVV-TVYSASDETNAFE 103
+R LCP K G V ++R ++ + + + G R++ TV A E +
Sbjct: 91 FRILCPECKA---YGFPPGFVAKVRDESGAFVTVHPPFAGDYVRIIETVDGARREADG-- 145
Query: 104 DGDKFVSPAQDALFKVHDRVIAEEL-----------RGDEDSDGGHQVTAKLLVPSDQIG 152
SPAQ+AL VH R++ + RG + D G + T +L+VP +G
Sbjct: 146 -RPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDPRDRG-KTTTRLIVPKLHVG 203
Query: 153 CVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQ 193
C++GKGG+I++ +R ET IRIL +D+H P C S+E+VQ
Sbjct: 204 CLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQ 245
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 75/162 (46%), Gaps = 29/162 (17%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI--TVSSKEFFED- 341
S R++CP G + ++R ESGA + V GD I TV D
Sbjct: 90 SFRILCPECKAYGF---PPGFVAKVRDESGAFVTVHPPFA-GDYVRIIETVDGARREADG 145
Query: 342 ---TLSATIEAVVRLQPRCSE----------------KIERDSGLISFTTRLLVPTSRIG 382
S EA++ + R E K RD G TTRL+VP +G
Sbjct: 146 RPPMFSPAQEALLMVHRRILETDADDGDEDGEYGPRGKDPRDRG--KTTTRLIVPKLHVG 203
Query: 383 CLIGKGGSIITEMRRLTKANIRILPK-ENLPKIASEDDEMVQ 423
CL+GKGG II +MR TK +IRILP+ ++ P+ S +E+VQ
Sbjct: 204 CLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQ 245
>gi|64085377|ref|NP_006539.3| insulin-like growth factor 2 mRNA-binding protein 2 isoform a [Homo
sapiens]
gi|224471831|sp|Q9Y6M1.2|IF2B2_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=Hepatocellular carcinoma autoantigen p62; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|119598617|gb|EAW78211.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Homo sapiens]
gi|158254760|dbj|BAF83353.1| unnamed protein product [Homo sapiens]
gi|410223074|gb|JAA08756.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251296|gb|JAA13615.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302886|gb|JAA30043.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342487|gb|JAA40190.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 599
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 180/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPH 412
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 413 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 470
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 471 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|328702409|ref|XP_001943097.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Acyrthosiphon pisum]
gi|328702413|ref|XP_003241893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Acyrthosiphon pisum]
Length = 426
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 8/181 (4%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+GP+D R L P + GSIIG+GG + +LR D + + + + PG E R++T+ S++D
Sbjct: 18 MGPDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPD-CPGPE-RILTIISSND 75
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
NA + + + +D + +++ G V ++LV Q GC+IGK
Sbjct: 76 --NALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIGK 133
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG V+ +R +TG++I+I + C + +D +VQI+G+ + + ++ L P
Sbjct: 134 GGLKVKELREKTGSRIKI----YTSCCPMSTDRVVQITGKPNTCSDCVREVLDLLKTAPV 189
Query: 218 R 218
+
Sbjct: 190 K 190
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
R + + LR++ P G +IGKGG I+++R + A + V G + ++T+ S
Sbjct: 15 RPKMGPDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTV--PDCPGPERILTIIS 72
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL------------ISFTTRLLVPTSRIGC 383
++ L E + L+ S + +R R+LV S+ GC
Sbjct: 73 SN--DNALKVLGEVMGNLEDGGS-RFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGC 129
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+IGKGG + E+R T + I+I D +VQI+G + D + +V+ L+
Sbjct: 130 IIGKGGLKVKELREKTGSRIKIYTS----CCPMSTDRVVQITGKPNTCSDCVREVLDLLK 185
>gi|146422870|ref|XP_001487369.1| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 78/356 (21%), Positives = 148/356 (41%), Gaps = 58/356 (16%)
Query: 3 GQRNSYGK-RSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
G SYG +++ +A+H R + + + + P +R CP+++ +IG+
Sbjct: 161 GTTTSYGTSQAYDPVPFANHLDYTSRPMANHQAERELDPTYVSFRMYCPVKEASFVIGKR 220
Query: 62 GEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA--LFKV 119
G+++ LR ++I++ E + +ER++ V PA++ F +
Sbjct: 221 GDMINHLREKANARIQVSENIKDVQERIILVK----------------GPAENVAKAFGL 264
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
R I EE + S Q K+L+P +G +IGKGG + I + A+++ ++
Sbjct: 265 ITRAILEEPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLK-AAEQ 323
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRL--HDNPSRSQHLLASAISNSHSSSGSL 237
LP+ +D ++ + G + A+ I+ + H + + ++ N+ + ++
Sbjct: 324 PLPNS---TDRVLSVLGVGDAIHIAIYYISQVIIEHKDILKKHKIVYYTPGNNQLMNNTM 380
Query: 238 ----------VGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR----------- 276
G PI G AP Y +A ++ P
Sbjct: 381 GLIPNNTYGNTGIIGNDPIQGGAPFQHNYQRQFQPSAPSHNQITTPVPTQLYTDEHGNTM 440
Query: 277 --DDLSS---------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA-IKVD 320
D ++S +FS + NIG VIGKGG I QIR+ SG + +K++
Sbjct: 441 IGDVITSVPVPAGTGTDKFSEDVFVANTNIGSVIGKGGNNIKQIRESSGCSYVKIE 496
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 9/130 (6%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS-SK 336
+L S R+ CPV VIGK G +IN +R+++ A I+V + + + +I V
Sbjct: 196 ELDPTYVSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIILVKGPA 255
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITE 394
E A++ E + + ++S + ++L+P +G +IGKGGS E
Sbjct: 256 ENVAKAFGLITRAILE------EPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFRE 309
Query: 395 MRRLTKANIR 404
+ + A ++
Sbjct: 310 IEENSAAKLK 319
>gi|332818640|ref|XP_001151234.2| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2 mRNA
binding protein 2 isoform 7 [Pan troglodytes]
Length = 599
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 180/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPH 412
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 413 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 470
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 471 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 195/429 (45%), Gaps = 58/429 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + G+ E+ +T+Y + T
Sbjct: 136 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 195
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + K + Q + + S G +++ ++L ++ IG +IGKGG
Sbjct: 196 NACK---KIMEVTQQEAYGL--------------SKG--EISLRILAHNNLIGRIIGKGG 236
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
++ I +T +I + + + L + ++ + G + KA I+S+L ++N
Sbjct: 237 TTIKKIMQDTDTKITVSSINDINNFNL--ERIITVKGSIDNMSKAESMISSKLRQSYEND 294
Query: 217 SRS---QHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLY 272
++ Q L+ + S + +G ++ P + G P PY G
Sbjct: 295 LQAMAPQSLMFPGLHPMAMMSTAGMGYSSRGPGLYGSGPAPYPYQTSLPTQQG------- 347
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P D F L P ++G +IG G+ I I + SGA++K+ + E D +
Sbjct: 348 -IPIGDTQETAF---LYIPNTSVGAIIGSKGSHIRNIIRFSGASVKI--APIEQDKPVEQ 401
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIG 386
+ ++ T+ + E+ + Q EK+ R+ G + T +LVP++++G +IG
Sbjct: 402 QNDRKV---TIVGSPESQWKAQYLIFEKM-REEGFVGGTEDVRLTIEILVPSTQVGRIIG 457
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGG + E++R+T + I++ +++ A E + VQI G + A R+RA +
Sbjct: 458 KGGQNVRELQRVTGSIIKLSEQQSTSPSADE-EATVQIIGPFFSVQSA----QRRIRAMV 512
Query: 447 FDREGAVST 455
GA T
Sbjct: 513 LQSSGAPGT 521
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 94/211 (44%), Gaps = 14/211 (6%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG--DDCLITVSSKEFFE 340
+F LR++ +G +IG+ G+ I QI Q + A + V + G + + + E
Sbjct: 136 DFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSLGAAEKAITIYGNPENCT 195
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
+ +E + E G IS R+L + IG +IGKGG+ I ++ + T
Sbjct: 196 NACKKIMEVTQQ------EAYGLSKGEISL--RILAHNNLIGRIIGKGGTTIKKIMQDTD 247
Query: 401 ANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVL 460
I + ++ E ++ + G +D A + ++LR + + A++ +
Sbjct: 248 TKITVSSINDINNFNLE--RIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMF 305
Query: 461 PYI-PVSENGSDGLNYESRDSKRHGRGP-PY 489
P + P++ + G+ Y SR +G GP PY
Sbjct: 306 PGLHPMAMMSTAGMGYSSRGPGLYGSGPAPY 336
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 29/172 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + V +R VT+
Sbjct: 354 QETAFLYI-PNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVG- 411
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIG 152
SP ++ +K +I E++R +E GG + +T ++LVPS Q+G
Sbjct: 412 --------------SP--ESQWKAQ-YLIFEKMR-EEGFVGGTEDVRLTIEILVPSTQVG 453
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
+IGKGGQ V+ ++ TG+ I+ L ++ S + + VQI G V+ A
Sbjct: 454 RIIGKGGQNVRELQRVTGSIIK-LSEQQSTSPSADEEATVQIIGPFFSVQSA 504
>gi|344282127|ref|XP_003412826.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Loxodonta africana]
Length = 599
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 188/417 (45%), Gaps = 62/417 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACATAEIEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A AP P+ + G +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSG-----YFS 407
Query: 270 SLYSA------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
SLY P ++ + L P +G +IGK GA I Q+ + +GA+IK+ +
Sbjct: 408 SLYPPHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--AP 465
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D VS + ++ EA + Q R K++ ++ + + VP+
Sbjct: 466 AEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPS 518
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 519 STAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 571
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|328702411|ref|XP_003241892.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Acyrthosiphon pisum]
Length = 428
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 95/181 (52%), Gaps = 8/181 (4%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+GP+D R L P + GSIIG+GG + +LR D + + + + PG E R++T+ S++D
Sbjct: 20 MGPDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPD-CPGPE-RILTIISSND 77
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
NA + + + +D + +++ G V ++LV Q GC+IGK
Sbjct: 78 --NALKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIGK 135
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG V+ +R +TG++I+I + C + +D +VQI+G+ + + ++ L P
Sbjct: 136 GGLKVKELREKTGSRIKI----YTSCCPMSTDRVVQITGKPNTCSDCVREVLDLLKTAPV 191
Query: 218 R 218
+
Sbjct: 192 K 192
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
R + + LR++ P G +IGKGG I+++R + A + V G + ++T+ S
Sbjct: 17 RPKMGPDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTV--PDCPGPERILTIIS 74
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL------------ISFTTRLLVPTSRIGC 383
++ L E + L+ S + +R R+LV S+ GC
Sbjct: 75 SN--DNALKVLGEVMGNLEDGGS-RFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGC 131
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+IGKGG + E+R T + I+I D +VQI+G + D + +V+ L+
Sbjct: 132 IIGKGGLKVKELREKTGSRIKIYTS----CCPMSTDRVVQITGKPNTCSDCVREVLDLLK 187
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 142/306 (46%), Gaps = 48/306 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVI---AEELRGDEDSDGGHQ---VTAKLLVPSDQIGCVIGKGG 159
A+FK +I E++R + VT L+VP+ Q G +IGKGG
Sbjct: 67 ---------AIFKAFAMIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGG 117
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR- 218
++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 118 CKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQIFVVMLESPPKG 173
Query: 219 ---------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDWS 268
S + A +++ G P T + +A + G+T +S
Sbjct: 174 VTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAIQQSHFPMTHGNTG--FS 231
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
L D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + D
Sbjct: 232 AGL------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTD 285
Query: 329 CLITVS 334
+T++
Sbjct: 286 RQVTIT 291
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/245 (23%), Positives = 100/245 (40%), Gaps = 59/245 (24%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY------------ 93
+ P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 102 LVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQ 161
Query: 94 -------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE-- 127
S F G + Q A L K+H I +
Sbjct: 162 IFVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAIQQSHF 221
Query: 128 --LRGDEDSDGGHQVTAK-----LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
G+ G +A+ L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 222 PMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 281
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
+D V I+G A+ + A I RL L+ + +S++++ S + P
Sbjct: 282 -----GSTDRQVTITGSAASISLAQYLINVRL--------SLVTGGMGSSYNNADSSIIP 328
Query: 241 TAATP 245
+P
Sbjct: 329 FCCSP 333
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 82/187 (43%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ + S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------IRSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +L LV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLSLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T L+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 146/319 (45%), Gaps = 61/319 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKG 261
S + A +++ G P T + +A P+ G+ G
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSG 232
Query: 262 ------DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
+ G W+ D S++ S L P IG +IG+ GA IN+IRQ SGA
Sbjct: 233 IESSSPEVKGYWAGL-------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 285
Query: 316 AIKVDSSSTEGDDCLITVS 334
IK+ + D +T++
Sbjct: 286 QIKIANPVEGSTDRQVTIT 304
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 76/190 (40%), Gaps = 59/190 (31%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 94 ---------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
S F G + Q A L K+H + +
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 219
Query: 128 ----------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNI 165
G E S D Q T+ +L +P+D IGC+IG+ G + I
Sbjct: 220 HFPMSHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEI 279
Query: 166 RSETGAQIRI 175
R +GAQI+I
Sbjct: 280 RQMSGAQIKI 289
>gi|196016215|ref|XP_002117961.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
gi|190579434|gb|EDV19529.1| hypothetical protein TRIADDRAFT_61998 [Trichoplax adhaerens]
Length = 364
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 39/300 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFEDGDKFVS 110
++ G IIG+GG +K R + ++I I + ++P ER+VTV D
Sbjct: 55 KEAGRIIGKGGAKIKSFREQSTARINISDGSLP---ERIVTVNGPID------------- 98
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGH-QVTAKLLVPSDQIGCVIGKGGQIVQNIRSET 169
A FK+ + + E+ R +S + LL+P +IGKGG V+ IR T
Sbjct: 99 -AVCKAFKLICQKLDEDFRIINNSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIREST 157
Query: 170 GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP--------SRSQH 221
GAQ+ I + LP+ SD ++ I+G +S + K + +++ L + P + +
Sbjct: 158 GAQVSIASNV-LPN---SSDRVMTITGSSSAISKCIQRLSQLLSELPLGQHVPYQPKPPN 213
Query: 222 LLASAISNS--HSSSGSLVGPTAATPIVGI-----APLMGPYGGYKGDTAGDWSRSLYSA 274
+ +A N H + ++ GP P + P++ Y D +++ +SA
Sbjct: 214 VPPTAFQNGQVHELTFAVPGPFPIPPHAQLPYGPPVPVITQIAPYSVDIPSIVTQN-FSA 272
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+ + + L P IG +IG+GG IN+IRQ SGA IK+ S + + +T+S
Sbjct: 273 MSNGGTFARSTQLLKIPHDLIGCIIGRGGVKINEIRQISGANIKIASPNGDTTGRQVTIS 332
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 58/193 (30%)
Query: 41 EDTV-YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
E T+ + L P+ SIIG+GG VK++R T +++ I V P S +RV+T+ +S
Sbjct: 125 EPTIKFDLLIPVPHCRSIIGKGGGTVKEIRESTGAQVSIASNVLPNSSDRVMTITGSSSA 184
Query: 99 TN-------------------------------AFEDGD----KFVSP------------ 111
+ AF++G F P
Sbjct: 185 ISKCIQRLSQLLSELPLGQHVPYQPKPPNVPPTAFQNGQVHELTFAVPGPFPIPPHAQLP 244
Query: 112 --------AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLL-VPSDQIGCVIGKGGQIV 162
Q A + V I + + G + +LL +P D IGC+IG+GG +
Sbjct: 245 YGPPVPVITQIAPYSVDIPSIVTQNFSAMSNGGTFARSTQLLKIPHDLIGCIIGRGGVKI 304
Query: 163 QNIRSETGAQIRI 175
IR +GA I+I
Sbjct: 305 NEIRQISGANIKI 317
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 25/159 (15%)
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQP 355
G +IGKGGA I R++S A I + S + ++TV+ I+AV +
Sbjct: 58 GRIIGKGGAKIKSFREQSTARINISDGSLP--ERIVTVN----------GPIDAVCKAFK 105
Query: 356 RCSEKIERDSGLISFTTR--------LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
+K++ D +I+ +++ LL+P +IGKGG + E+R T A + I
Sbjct: 106 LICQKLDEDFRIINNSSKSEPTIKFDLLIPVPHCRSIIGKGGGTVKEIRESTGAQVSI-- 163
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
N+ + + D ++ I+G A IQ +++L + L
Sbjct: 164 ASNV--LPNSSDRVMTITGS-SSAISKCIQRLSQLLSEL 199
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 364 DSGLISFTTRLL-VPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ G + +T+LL +P IGC+IG+GG I E+R+++ ANI+I
Sbjct: 275 NGGTFARSTQLLKIPHDLIGCIIGRGGVKINEIRQISGANIKI 317
>gi|4191610|gb|AAD09827.1| IGF-II mRNA-binding protein 2 [Homo sapiens]
gi|18204201|gb|AAH21290.1| Insulin-like growth factor 2 mRNA binding protein 2 [Homo sapiens]
gi|123982692|gb|ABM83087.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
gi|157928388|gb|ABW03490.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
Length = 598
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 180/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 192 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 251
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 252 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 293
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 294 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 351
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 352 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPH 411
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 412 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 469
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 470 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 522
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 523 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 557
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 424 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 482
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 483 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 527
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 528 GKTVNELQNLTSAEVIVPRDQ 548
>gi|426343191|ref|XP_004038198.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Gorilla gorilla gorilla]
Length = 376
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 176/389 (45%), Gaps = 73/389 (18%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
+G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 25 VGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS------------ 72
Query: 113 QDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
+A R+I E ++ + D + ++ K+L + +G +IGK G+ ++ I ETG
Sbjct: 73 -EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGT 126
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH 231
+I I + L + + + G A +I +L + + +LA N+H
Sbjct: 127 KITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFENDMLAV---NTH 179
Query: 232 SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCP 291
S S + P GP+ + +S P ++ + L P
Sbjct: 180 SGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEI------VNLFIP 212
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVV 351
+G +IGK GA I Q+ + +GA+IK+ + EG D VS + ++ EA
Sbjct: 213 TQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI---ITGPPEAQF 263
Query: 352 RLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+ Q R K++ ++ + + VP+S G +IGKGG + E++ LT A + I+
Sbjct: 264 KAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IV 322
Query: 407 PKENLPKIASEDDE-MVQISGDLDLAKDA 434
P++ P E++E +V+I G ++ A
Sbjct: 323 PRDQTP---DENEEVIVRIIGHFFASQTA 348
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 202 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 260
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 261 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 305
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 306 GKTVNELQNLTSAEVIVPRDQ 326
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 145/334 (43%), Gaps = 75/334 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
S + A SSGS P A + + L GP
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGP------PQEAYTI 226
Query: 269 RSLYSAPRDDL----------------------------SSKEFSLRLVCPVANIGGVIG 300
+ Y+ P+ DL S++ S L P IG +IG
Sbjct: 227 QGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIG 286
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 287 RQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 320
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS +SS V
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNSTASSRPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 264 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 318
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 319 ITGSAASISLAQYLINVRL 337
>gi|351705765|gb|EHB08684.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Heterocephalus
glaber]
Length = 546
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 185/406 (45%), Gaps = 65/406 (16%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 110 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 169
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 170 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 212
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 213 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 270
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 271 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 315
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 316 QFEQSETE-TVHLFIPAPSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 371
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 372 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 425
Query: 391 I-------ITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+ E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 426 TASTSAKPVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHF 467
>gi|403270472|ref|XP_003927203.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Saimiri boliviensis boliviensis]
Length = 585
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 98/412 (23%), Positives = 187/412 (45%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 179 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 238
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + E++ ++ K+L + +G +IGK G
Sbjct: 239 -------------EAC-----RMILEIMQKEAEETKLAEEIPLKILAHNGLVGRLIGKEG 280
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 281 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACACAEIEIMKKLREAFEND 338
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 339 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 398
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 399 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 456
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 457 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 509
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 510 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 557
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 411 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 469
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 470 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 514
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 515 GKTVNELQNLTSAEVIVPRDQ 535
>gi|351698877|gb|EHB01796.1| Poly(rC)-binding protein 4 [Heterocephalus glaber]
Length = 443
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 147/324 (45%), Gaps = 49/324 (15%)
Query: 12 SHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTV---YRYLCPIRKIGSIIGRGGEIVKQL 68
+HSQ A P++ + ++ PE ++ R L +++GSIIG+ GE VK++
Sbjct: 27 THSQATVAPAPPDRMSSSDAGLEE---EPELSITLTLRMLMHGKEVGSIIGKKGETVKRI 83
Query: 69 RIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEE 127
R + ++I I E GS ER+ T+ + T A ++ FK+ + + A
Sbjct: 84 REQSSARITISE---GSCPERITTI---TGSTAAVFHAVSMIA------FKLDEDLCAAP 131
Query: 128 LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
G S VT +L++P+ Q G +IGK G ++ IR TGAQ+++ D LP+ R
Sbjct: 132 ANGGSVSR--PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGD-LLPNSTER 188
Query: 188 SDELVQISGEASVVKKALCQIASRLHDNPSRSQH------------LLASAISNSHSSSG 235
+ V +SG + + QI + + ++P + LL++ S
Sbjct: 189 A---VTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQY 245
Query: 236 SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANI 295
V P T + ++ P+ D P SS+EF + P I
Sbjct: 246 GAVTPAEVTKLQQLSGHAVPFASPSVVPGLD--------PSAQTSSQEF----LVPNDLI 293
Query: 296 GGVIGKGGAIINQIRQESGAAIKV 319
G VIG+ G+ I++IRQ SGA IK+
Sbjct: 294 GCVIGRQGSKISEIRQMSGAHIKI 317
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 99/225 (44%), Gaps = 31/225 (13%)
Query: 255 PYGGYKGDTAGDWSRS---LYSAPRDDLSSKE------------FSLRLVCPVANIGGVI 299
P + A W+ S + AP D +SS + +LR++ +G +I
Sbjct: 14 PCSLARASQATAWTHSQATVAPAPPDRMSSSDAGLEEEPELSITLTLRMLMHGKEVGSII 73
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE--DTLSATIEAVVRLQPRC 357
GK G + +IR++S A I + S IT S+ F ++ ++ + P
Sbjct: 74 GKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPAN 133
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASE 417
+ R T RL++P S+ G LIGK G+ I E+R T A +++ + LP +
Sbjct: 134 GGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NS 185
Query: 418 DDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTFVPVL 460
+ V +SG DA+I + ++ A + + +GA + P L
Sbjct: 186 TERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPYHPSL 226
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 145/319 (45%), Gaps = 51/319 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ +++ I E GS ER++T+ ++D + F
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKRIREESSARVNISE---GSCPERIITITGSTD--SVFRA 73
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
+K+ + + A G S VT +L++P+ Q G +IGKGG ++
Sbjct: 74 FTMIT-------YKLEEDLTALVANGTISSK--PPVTLRLVIPASQCGSLIGKGGAKIKE 124
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-- 222
IR TGAQI++ D LP+ R V ISG V + + I + + ++P + +
Sbjct: 125 IRESTGAQIQVAGD-LLPNSTERG---VTISGNQDSVIQCVKLICTVILESPPKGATIPY 180
Query: 223 ------LASAISNSHSSSGSLVGPTAATPIVGIA----------PLMGPYGGYKGDTAGD 266
A I+ + S P P+ +A L YG + A
Sbjct: 181 RPSPSPAALLIAGNQVFEASEFAP---HPLYSVAQGGLDLQQAYTLQNQYGIPHSELAKL 237
Query: 267 WSRSL------YSAPRDDL-----SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
S+ + P + S+ + S L+ P IG +IG+ G IN+IRQ SGA
Sbjct: 238 HQLSVQQGLSPIAQPASAVIPGMDSNSQTSQELLIPNDLIGSIIGRQGTKINEIRQVSGA 297
Query: 316 AIKVDSSSTEGDDCLITVS 334
IK+ S D +T++
Sbjct: 298 QIKIGSQLDGTSDRHVTIT 316
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LRL+ +G +IGK G + +IR+ES A + + S IT S+ F
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCPERIITITGSTDSVF---- 71
Query: 344 SATIEAVVRLQPRCSEKIERD------SGLIS----FTTRLLVPTSRIGCLIGKGGSIIT 393
R + K+E D +G IS T RL++P S+ G LIGKGG+ I
Sbjct: 72 --------RAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIK 123
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A I++ + LP + + V ISG+ +D++IQ + + + +
Sbjct: 124 EIRESTGAQIQV-AGDLLP---NSTERGVTISGN----QDSVIQCVKLICTVILESPPKG 175
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 176 AT----IPYRP 182
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 79/187 (42%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
DGG VT +LL+ ++G +IGK G+ V+ IR E+ A++ I + SC R ++
Sbjct: 9 DGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG----SCPER---II 61
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
I+G V +A I +L ++ L + ++N SS V
Sbjct: 62 TITGSTDSVFRAFTMITYKLEED-------LTALVANGTISSKPPV-------------- 100
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGGA I +IR+
Sbjct: 101 --------------------------------TLRLVIPASQCGSLIGKGGAKIKEIRES 128
Query: 313 SGAAIKV 319
+GA I+V
Sbjct: 129 TGAQIQV 135
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 144/310 (46%), Gaps = 56/310 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-DKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPLSIIECVKQICVVMLESPPK 172
Query: 219 SQHL----------LASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPY---GGYKGDTA 264
+ + A +++ G P T + +A P+ +G TA
Sbjct: 173 GVTIPYRPKPSGSPVTFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGFTA 232
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G D +++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 233 G-----------MDATTQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 281
Query: 325 EGDDCLITVS 334
+D +T++
Sbjct: 282 GSNDRQVTIT 291
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S++SNS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIDKLEED-------ISSSMSNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 46/177 (25%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSA-------- 95
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPLSIIECV 159
Query: 96 -----------------------SDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
S F G + Q A L K+H + +
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSGSPVTFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 128 LRGDEDSDGGHQV---------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
S G + +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 PFPLAPSSQGFTAGMDATTQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|190344879|gb|EDK36648.2| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/356 (21%), Positives = 146/356 (41%), Gaps = 58/356 (16%)
Query: 3 GQRNSYG-KRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
G SYG +++ +A+H R + + + P +R CP+++ +IG+
Sbjct: 161 GTTTSYGTSQAYDPVPFANHLDYTSRPMANHQAERESDPTYVSFRMYCPVKEASFVIGKR 220
Query: 62 GEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA--LFKV 119
G+++ LR ++I++ E + +ER+++V PA++ F +
Sbjct: 221 GDMINHLREKANARIQVSENIKDVQERIISVK----------------GPAENVAKAFGL 264
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
R I EE + S Q K+L+P +G +IGKGG + I + A+++ ++
Sbjct: 265 ITRAILEEPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLK-AAEQ 323
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRL--HDNPSRSQHLLASAISNSHSSSGSL 237
LP+ +D ++ + G + A+ I+ + H + + ++ N+ + ++
Sbjct: 324 PLPNS---TDRVLSVLGVGDAIHIAIYYISQVIIEHKDILKKHKIVYYTPGNNQLMNNTM 380
Query: 238 ----------VGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS------- 280
G PI G AP Y +A ++ P +
Sbjct: 381 GLIPNNTYGNTGIIGNDPIQGGAPFQHNYQRQFQPSAPSHNQITTPVPTQSYTDEHGNTM 440
Query: 281 ---------------SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA-IKVD 320
+ +FS + NIG VIGKGG I QIR+ SG + +K++
Sbjct: 441 IGDVITSVPVPAGTGTDKFSEDVFVANTNIGSVIGKGGNNIKQIRESSGCSYVKIE 496
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS-SKEFFEDTL 343
S R+ CPV VIGK G +IN +R+++ A I+V + + + +I+V E
Sbjct: 203 SFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIISVKGPAENVAKAF 262
Query: 344 SATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
A++ E + + ++S + ++L+P +G +IGKGGS E+ + A
Sbjct: 263 GLITRAILE------EPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAA 316
Query: 402 NIR 404
++
Sbjct: 317 KLK 319
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 136/282 (48%), Gaps = 30/282 (10%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + ++I++ E PG+ +R++ V A +E
Sbjct: 36 TYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEI 95
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
Q A+ + ++++E L ++D+D + +L+VP+ G +IGKGG
Sbjct: 96 -------------QRAVELILSKLLSE-LHSEDDNDAEPKTKVRLVVPNGSCGGIIGKGG 141
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+++ ++ A I+I ++ + ++D LV ++G +A+ I S+L ++P +
Sbjct: 142 VTIRSFIEDSQAGIKISPQDN--NYYGQNDRLVMLTGTFDEQMRAIELIVSKLAEDPHYA 199
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
Q ++++ S G P + P + P A ++ + + +
Sbjct: 200 Q-----SMNSPFSYPGVYFSGYQGVPYTYVLPSVAP----PAYNAVNYRPNGTAGGKLQN 250
Query: 280 SSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKV 319
S +E S L VA+ IG V+G+GG I +I Q SGA IK+
Sbjct: 251 SKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQVSGARIKI 292
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 28/178 (15%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
D K +R + + G VIGKGG+ I + +SGA I++ + E
Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRN-------------HE 76
Query: 338 FFEDT------LSATIEAVVR-----LQPRCSEKIERDSGLISFTT--RLLVPTSRIGCL 384
FF T +S I + R L SE D T RL+VP G +
Sbjct: 77 FFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSEDDNDAEPKTKVRLVVPNGSCGGI 136
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
IGKGG I ++A I+I P++N ++D +V ++G D A+ ++++L
Sbjct: 137 IGKGGVTIRSFIEDSQAGIKISPQDN--NYYGQNDRLVMLTGTFDEQMRAIELIVSKL 192
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 180/408 (44%), Gaps = 67/408 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L +G+IIGR G ++Q+ ++++++ + + GS E+ +T+Y +
Sbjct: 125 DFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNVGSLEKAITIYGNPENCT 184
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+ + I E ++ + ++ ++ K+L ++ IG +IGK G
Sbjct: 185 S------------------ACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKSGN 226
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ I +T +I + + S L + ++ + G DN SR +
Sbjct: 227 TIKRIMQDTDTKITVSSINDINSFNL--ERIITVKGSI---------------DNMSRGE 269
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPL---------MGPYGGYKGDTAGDWSRSL 271
+++ + S+ + + P + G+ P+ MG + G G G S +
Sbjct: 270 SQISAKLRQSYENDLQALAPQSIM-FPGLHPMAMMSTAGNGMG-FAGRSGMYPGS-SYPM 326
Query: 272 YSAPRDD-----LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
Y P S + + L P +G +IG G+ I I + SGA++K+ + E
Sbjct: 327 YQPPTAPGVPPGSSDVQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKI--APLEA 384
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSR 380
D L + ++ T+ T EA + Q EK+ R+ G +S T +LVP+++
Sbjct: 385 DKPLEQQTERKV---TIVGTPEAQWKAQYLIFEKM-REEGFVSGTDDVRLTVEILVPSAQ 440
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
+G +IGKGG + E++R+T + I+ LP E+ +++ V I G
Sbjct: 441 VGRIIGKGGQNVRELQRVTGSIIK-LP-EHTAATPVDEETTVHIIGPF 486
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 28/163 (17%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 343 QETTYLYI-PNNAVGAIIGTKGSHIRNIIRFSGASVKIAPLEADKPLEQQTERKVTIVGT 401
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGC 153
+ A +K +I E++R + G V T ++LVPS Q+G
Sbjct: 402 PE-----------------AQWKAQ-YLIFEKMREEGFVSGTDDVRLTVEILVPSAQVGR 443
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
+IGKGGQ V+ ++ TG+ I++ EH + + + V I G
Sbjct: 444 IIGKGGQNVRELQRVTGSIIKL--PEHTAATPVDEETTVHIIG 484
>gi|12230430|sp|P57724.1|PCBP4_MOUSE RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957163|gb|AAG09239.1|AF176328_1 alphaCP-4 [Mus musculus]
Length = 403
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 137/297 (46%), Gaps = 46/297 (15%)
Query: 39 GPEDTV---YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYS 94
GPE ++ R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI-- 65
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ T A ++ FK+ + + A G S VT +L++P+ Q G +
Sbjct: 66 -TGSTAAVFHAVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSL 116
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IGK G ++ IR TGAQ+++ D LP+ R+ V +SG + + QI + + +
Sbjct: 117 IGKAGTKIKEIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILE 172
Query: 215 NPSRSQH------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
+P + LL++ S V P T + ++ P+
Sbjct: 173 SPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVV 232
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 233 PGMD--------PSTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 142/311 (45%), Gaps = 59/311 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIV---GIA-PLMGPYGGYKGDTAGDWSRSLYSA 274
I SGS P++ G A + G + + D ++ +
Sbjct: 173 -----GVTIPYRPKPSGS--------PVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 275 PRD-----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
P D S++ S + P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 220 PFPIAPSNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV 279
Query: 324 TEGDDCLITVS 334
D +T++
Sbjct: 280 DGSTDRQVTIT 290
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 45/176 (25%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSA-------- 95
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECV 159
Query: 96 -----------------------SDETNAFEDGDKFVSPAQDA-----LFKVHDRV---- 123
S F G + Q A L K+H
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 124 ---IAEELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
IA +G D Q ++ ++ +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 PFPIAPSNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 275
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D S + + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|395540426|ref|XP_003772156.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like [Sarcophilus harrisii]
Length = 587
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 90/425 (21%), Positives = 184/425 (43%), Gaps = 77/425 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++++ + +
Sbjct: 197 DIPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASPEGCS 256
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 257 T------------------ACKIIMEIMQKEAQDTKFTDEIPLKILAHNNFVGRLIGKEG 298
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN---- 215
+ ++ I +T +I I + L + + + G KA +I ++ ++
Sbjct: 299 RNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSIETCGKAEEEIMKKIRESYESD 356
Query: 216 ---PSRSQHLLASAISNS-----HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDW 267
+ HLL N+ S+SG T P A PYG
Sbjct: 357 LSAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLGVPSAAAATNYLPYGQ--------- 407
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
++ ++ L P +G +IGK G I Q+ + +GA+IK+ T
Sbjct: 408 ------------QAETETVHLFIPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPPETPDA 455
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIG 382
+ + ++ EA + Q R K++ ++ + + VP+ G
Sbjct: 456 KERMVI---------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAG 506
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQV 438
+IGKGG + E++ LT A + ++P++ +P E+DE +V+I+G LA+ + ++
Sbjct: 507 RVIGKGGKTVNELQNLTSAEV-VVPRDQIP---DENDEVIVKITGHFYACQLAQRKIQEI 562
Query: 439 MTRLR 443
+ +++
Sbjct: 563 LAQVK 567
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/183 (21%), Positives = 79/183 (43%), Gaps = 15/183 (8%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ LR++ P +G +IGK GA I I +++ + I + G S K T
Sbjct: 197 DIPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAG------ASEKPI---T 247
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFT----TRLLVPTSRIGCLIGKGGSIITEMRRL 398
+ A+ E E +++++ FT ++L + +G LIGK G + ++ +
Sbjct: 248 IHASPEGCSTACKIIMEIMQKEAQDTKFTDEIPLKILAHNNFVGRLIGKEGRNLKKIEQD 307
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
T I I P + L + + + G ++ A ++M ++R + A++
Sbjct: 308 TDTKITISPLQEL--TLYNPERTITVKGSIETCGKAEEEIMKKIRESYESDLSAMNLQAH 365
Query: 459 VLP 461
+LP
Sbjct: 366 LLP 368
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 145/319 (45%), Gaps = 61/319 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKG 261
S + A +++ G P T + +A P+ G+ G
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSG 232
Query: 262 ------DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
+ G W+ D S++ S L P IG +IG+ GA IN+IRQ SGA
Sbjct: 233 IESSSPEVKGYWAGL-------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 285
Query: 316 AIKVDSSSTEGDDCLITVS 334
IK + D +T++
Sbjct: 286 QIKTANPVEGSTDRQVTIT 304
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 88/227 (38%), Gaps = 64/227 (28%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 94 ---------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
S F G + Q A L K+H + +
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 219
Query: 128 ----------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNI 165
G E S D Q T+ +L +P+D IGC+IG+ G + I
Sbjct: 220 HFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEI 279
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
R +GAQI+ +D V I+G A+ + A I RL
Sbjct: 280 RQMSGAQIKTANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 321
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 139/327 (42%), Gaps = 59/327 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGDTAGDWSRSLYSA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
+ D ++ + P D S++ S L P IG +IG+ GA IN
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 295
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVS 334
+IRQ SGA IK + D +T++
Sbjct: 296 EIRQMSGAQIKTANPVEGSTDRQVTIT 322
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+ +D V
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANP-----VEGSTDRQVT 320
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 321 ITGSAASISLAQYLINVRL 339
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 147/323 (45%), Gaps = 73/323 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHL----------------LASAISNSHS-----SSGSLVGPTAATPIVGIA----PL- 252
+ A A+ H+ SS + + P T + +A P
Sbjct: 173 GVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDSSSASISPQ-LTKLHQLAMQQSPFP 231
Query: 253 MGPYG-GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
MGP G++G D S++ S + P IG +IG+ G+ IN+IRQ
Sbjct: 232 MGPNNPGFQGGM--------------DASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQ 277
Query: 312 ESGAAIKVDSSSTEGDDCLITVS 334
SGA IK+ + D +T++
Sbjct: 278 MSGAQIKIANPVEGSADRQVTIT 300
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D S + + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|440907529|gb|ELR57670.1| RNA-binding protein Nova-2, partial [Bos grunniens mutus]
Length = 298
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 126/279 (45%), Gaps = 41/279 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 67
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 68 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 124
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 125 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 181
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
L + S ++ GP A + P G A + ++ L
Sbjct: 182 L--------NISYANVAGPVANS---------NPTGLTAEKLAAESAKEL---------- 214
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
+ + P +G ++GKGG + + ++ +GA I++
Sbjct: 215 ----VEIAVPENLVGAILGKGGKTLVEYQELTGARIQIS 249
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 121/299 (40%), Gaps = 79/299 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
K+L+PS G +IGKGGQ + ++ ETGA I++ K + LVQ G A +
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ--GTAEALN 65
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
IA ++ + P Q + + N ++ P D
Sbjct: 66 AVHSFIAEKVREIP---QAMTKPEVVN----------------------ILQPQTTMNPD 100
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
A +L+ P + G +IGKGGA + + ++SGA +++ S
Sbjct: 101 RAKQ-------------------AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL-SQ 140
Query: 323 STEGDDC---LITVSSK-EFFEDTLSATIEAVVRLQPRCS-------------------- 358
EG + ++TVS + E +SA ++ V + P+ S
Sbjct: 141 KPEGINLQERVVTVSGEPEQVHKAVSAIVQKV-QEDPQSSSCLNISYANVAGPVANSNPT 199
Query: 359 ----EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK-ENLP 412
EK+ +S + VP + +G ++GKGG + E + LT A I+I K E LP
Sbjct: 200 GLTAEKLAAESA--KELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 256
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 63
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 64 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 121
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 122 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 173
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 144/310 (46%), Gaps = 56/310 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-DKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPLSIIECVKQICVVMLESPPK 172
Query: 219 SQHL----------LASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYG---GYKGDTA 264
+ + A +++ G P T + +A P+ +G TA
Sbjct: 173 GVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPLAPSSQGFTA 232
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G D +++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 233 GM-----------DATTQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE 281
Query: 325 EGDDCLITVS 334
+D +T++
Sbjct: 282 GSNDRQVTIT 291
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S++SNS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIDKLEED-------ISSSMSNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIDKLEEDISSSMSNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|255559157|ref|XP_002520600.1| conserved hypothetical protein [Ricinus communis]
gi|223540199|gb|EEF41773.1| conserved hypothetical protein [Ricinus communis]
Length = 161
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 13/131 (9%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D VYR + P+ K+GSIIGR GE++KQ+ I+T+++IRI + P +R+V +
Sbjct: 24 PGDNVYRLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVLI------- 76
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA-----KLLVPSDQIGCV 154
+ E+ + +SPA DA+ +V RV G+ D+ G A +LLV S Q +
Sbjct: 77 SGKEEPEAALSPAIDAVLRVFKRVSGPSA-GEGDATGSAVAGAAFSSVRLLVASSQAINL 135
Query: 155 IGKGGQIVQNI 165
IGK G +++I
Sbjct: 136 IGKQGSTIKSI 146
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 67/131 (51%), Gaps = 11/131 (8%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSAT 346
RL+ PVA +G +IG+ G +I Q+ E+ A I++ D ++ +S KE E LS
Sbjct: 30 RLIVPVAKVGSIIGRKGELIKQMCIETRARIRILDGPPSISDRIVLISGKEEPEAALSPA 89
Query: 347 IEAVVRLQPRCS--EKIERD------SGLISFTTRLLVPTSRIGCLIGKGGSIIT---EM 395
I+AV+R+ R S E D +G + RLLV +S+ LIGK GS I E
Sbjct: 90 IDAVLRVFKRVSGPSAGEGDATGSAVAGAAFSSVRLLVASSQAINLIGKQGSTIKSILES 149
Query: 396 RRLTKANIRIL 406
RR ++ I
Sbjct: 150 RRCASSSCYIF 160
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 11/76 (14%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD----- 427
RL+VP +++G +IG+ G +I +M T+A IRIL + P I+ D +V ISG
Sbjct: 30 RLIVPVAKVGSIIGRKGELIKQMCIETRARIRIL--DGPPSIS---DRIVLISGKEEPEA 84
Query: 428 -LDLAKDALIQVMTRL 442
L A DA+++V R+
Sbjct: 85 ALSPAIDAVLRVFKRV 100
>gi|281353861|gb|EFB29445.1| hypothetical protein PANDA_010268 [Ailuropoda melanoleuca]
Length = 596
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 95/434 (21%), Positives = 196/434 (45%), Gaps = 78/434 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 I-----------------ITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---D 429
+ E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 509 TASTSAKPVQWTCVYLVQVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQ 564
Query: 430 LAKDALIQVMTRLR 443
+A+ + +++T+++
Sbjct: 565 VAQRKIQEILTQVK 578
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 142/311 (45%), Gaps = 59/311 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIV---GIA-PLMGPYGGYKGDTAGDWSRSLYSA 274
I SGS P++ G A + G + + D ++ +
Sbjct: 173 -----GVTIPYRPKPSGS--------PVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 275 PRD-----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
P D S++ S + P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 220 PFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV 279
Query: 324 TEGDDCLITVS 334
D +T++
Sbjct: 280 DGSTDRQVTIT 290
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D S + + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|426340771|ref|XP_004034301.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|426340773|ref|XP_004034302.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Gorilla gorilla
gorilla]
gi|426340775|ref|XP_004034303.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Gorilla gorilla
gorilla]
Length = 403
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 133/288 (46%), Gaps = 43/288 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH-- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 222 ----------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
LL++ S V PT T + ++ P+ D
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQGQYGAVTPTEVTKLQQLSSHAVPFATPSVVPGLD----- 236
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 237 ---PGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPR 356
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPTEVTKLQQL 219
Query: 357 CSEKIE---------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 140/331 (42%), Gaps = 63/331 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL------ 212
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 213 -------HDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
PS S + A + S H++ + P P + + G
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ 235
Query: 256 YGGYKGDTAGDWSRSLYSA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGG 303
Y + D ++ + P D S++ S L P IG +IG+ G
Sbjct: 236 YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQG 295
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
A IN+IRQ SGA IK+ + D +T++
Sbjct: 296 AKINEIRQMSGAQIKIANPVEGSTDRQVTIT 326
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 324
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 325 ITGSAASISLAQYLINVRL 343
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 142/311 (45%), Gaps = 59/311 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIV---GIA-PLMGPYGGYKGDTAGDWSRSLYSA 274
I SGS P++ G A + G + + D ++ +
Sbjct: 173 -----GVTIPYRPKPSGS--------PVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 275 PRD-----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
P D S++ S + P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 220 PFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPV 279
Query: 324 TEGDDCLITVS 334
D +T++
Sbjct: 280 DGSTDRQVTIT 290
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 45/176 (25%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECV 159
Query: 94 ---------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRV---- 123
S F G + Q A L K+H
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 124 ---IAEELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
IA +G D Q ++ ++ +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 PFPIAPSNQGFTGIDASAQTSSHEMTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 275
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D S + + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|71023653|ref|XP_762056.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
gi|46101621|gb|EAK86854.1| hypothetical protein UM05909.1 [Ustilago maydis 521]
Length = 850
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 28/265 (10%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+ G+ + ++R + +++ I E +PG+ ER++TV D A
Sbjct: 561 IIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPLD--------------AVSKA 606
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT + +VP+ ++G VIGK G ++ I+ +GA++
Sbjct: 607 FGLIVRRINDEPFDLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARL-TA 665
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP ++ ++ ISG A V A+ + S L ++P R+ +N+ +
Sbjct: 666 GEAMLPGS---TERVLSISGVADAVHIAVYYVGSILLEHPDRN--------ANNLPYRPT 714
Query: 237 LVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
GP+ G P P GY AG + L + ++ P
Sbjct: 715 AGGPSTRAGAAGANPYAAPQQPFGYGAPAAGFGGAPAGAGGAPQLPPGSQTQQIFIPNDL 774
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
+G +IGKGG+ IN+IR S + IK+
Sbjct: 775 VGCIIGKGGSKINEIRSMSASHIKI 799
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 61/126 (48%), Gaps = 3/126 (2%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+ + + S+R + ++ +IGK G IN+IR +S A + + + ++TVS
Sbjct: 541 ETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPL 600
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
D +S +VR + G S T R +VP SR+G +IGK GS I E++
Sbjct: 601 ---DAVSKAFGLIVRRINDEPFDLASVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQE 657
Query: 398 LTKANI 403
+ A +
Sbjct: 658 ASGARL 663
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEAS 199
T ++ +P+D +GC+IGKGG + IRS + + I+I++ + +E LV I+G
Sbjct: 765 TQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPP 824
Query: 200 VVKKALCQIASRLHDNPSR 218
++ A+ + RL R
Sbjct: 825 NIQMAVSLLYQRLEQEKMR 843
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL-PKENLPKIASEDDEMVQISG- 426
S T ++ +P +GC+IGKGGS I E+R ++ ++I+I+ P + S ++ +V I+G
Sbjct: 763 SQTQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGP 822
Query: 427 --DLDLAKDALIQVMTRLRANL 446
++ +A L Q + + + L
Sbjct: 823 PPNIQMAVSLLYQRLEQEKMRL 844
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSA 95
+ G + R++ P ++GS+IG+ G +K+++ + +++ GE +PGS ERV+++
Sbjct: 624 VPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLPGSTERVLSISGV 683
Query: 96 SDETN 100
+D +
Sbjct: 684 ADAVH 688
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 130 GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSD 189
GD Q++ + L+ + +IGK G+ + IR ++ A++ I E +P +
Sbjct: 537 GDSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNI--SEIIPG---NPE 591
Query: 190 ELVQISGEASVVKKALCQIASRLHDNP 216
++ +SG V KA I R++D P
Sbjct: 592 RILTVSGPLDAVSKAFGLIVRRINDEP 618
>gi|327267261|ref|XP_003218421.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Anolis carolinensis]
Length = 576
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 175/391 (44%), Gaps = 58/391 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K L T+SK+ I + G+ E+ +T+++ + +
Sbjct: 192 DFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS 251
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+A + D + E E++ ++ K+L + +G +IGK G+
Sbjct: 252 -------------EACRMILDIMQKE----AEETKSAEEIPLKILAHNSLVGRLIGKEGR 294
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPS 217
++ I +TG +I I + L + + + G A +I ++L ++N
Sbjct: 295 NLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGSIEACSNAEAEIMNKLREAYENDI 352
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
+ + A+ I + ++ + G++ M P G A + ++ P
Sbjct: 353 VTVNQQANLIPGLNLNALGIFS-------TGLS--MLPSGTGVRRPAVSTPYNPFAVPEQ 403
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSK 336
++ + L P +G +IGK G I Q+ + +GA+IK+ + S E + ++ ++
Sbjct: 404 EV------VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPEASERMVIITGP 457
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
EA + Q R K++ ++ + + VP+S G +IGKGG
Sbjct: 458 P----------EAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSSAAGRVIGKGGKT 507
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + I+P++ P E++E+V
Sbjct: 508 VNELQNLTSAEV-IVPRDQTP---DENEEVV 534
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G+ +KQL + I+I P + ER+V + + E
Sbjct: 401 PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPEASERMVII-TGPPE 459
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 460 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIKVPSSAAGRVIGKG 504
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 505 GKTVNELQNLTSAEVIVPRDQ 525
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 71/162 (43%), Gaps = 9/162 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
+F LR++ P +G +IGK G I + +++ + + + G + IT+ +
Sbjct: 192 DFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHA------ 245
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
T EA + ++ E ++L S +G LIGK G + ++ + T
Sbjct: 246 TPEGCSEACRMILDIMQKEAEETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGT 305
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
I I P ++L + + + G ++ +A ++M +LR
Sbjct: 306 KITISPLQDL--TIYNPERTITVKGSIEACSNAEAEIMNKLR 345
>gi|227497228|ref|NP_067542.3| poly(rC)-binding protein 4 [Mus musculus]
gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus musculus]
Length = 403
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 137/297 (46%), Gaps = 46/297 (15%)
Query: 39 GPEDTV---YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYS 94
GPE ++ R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI-- 65
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ T A ++ FK+ + + A G S VT +L++P+ Q G +
Sbjct: 66 -TGSTAAVFHAVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSL 116
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IGK G ++ IR TGAQ+++ D LP+ R+ V +SG + + QI + + +
Sbjct: 117 IGKAGTKIKEIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILE 172
Query: 215 NPSRSQH------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
+P + LL++ S V P T + ++ P+
Sbjct: 173 SPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVV 232
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 233 PGLD--------PSTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
>gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus]
Length = 403
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 137/297 (46%), Gaps = 46/297 (15%)
Query: 39 GPEDTV---YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYS 94
GPE ++ R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI-- 65
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ T A ++ FK+ + + A G S VT +L++P+ Q G +
Sbjct: 66 -TGSTAAVFHAVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSL 116
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IGK G ++ IR TGAQ+++ D LP+ R+ V +SG + + QI + + +
Sbjct: 117 IGKAGTKIKEIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILE 172
Query: 215 NPSRSQH------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
+P + LL++ S V P T + ++ P+
Sbjct: 173 SPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVV 232
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 233 PGLD--------PSTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
>gi|291393785|ref|XP_002713277.1| PREDICTED: poly(rC) binding protein 4 [Oryctolagus cuniculus]
Length = 403
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 140/298 (46%), Gaps = 33/298 (11%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P + +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATI- 180
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK-----GDTAGDWSRSLYSA--PR 276
S S L+ P+ G + P K G S S+ P
Sbjct: 181 --PYHPSLSLGTVLLSANQGFPVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLDPG 238
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 239 TQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQ-- 354
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFPVQGQYGAVTPAEVTKLQQL 219
Query: 355 -----PRCSEKIER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
P S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SGHAVPFASPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|427785521|gb|JAA58212.1| Putative igf-ii mrna-binding protein imp [Rhipicephalus pulchellus]
Length = 657
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 105/431 (24%), Positives = 182/431 (42%), Gaps = 96/431 (22%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L +G+IIGR G ++Q+ +++++ + + GS E+V+T+Y +
Sbjct: 205 DFPLRILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHRKENAGSLEKVITIYGNPEN-- 262
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S A + +V + + RGD V K+L ++ IG +IGK G
Sbjct: 263 --------CSTACQKILEVMQQEASNTNRGD--------VPLKILAHNNLIGRIIGKSGN 306
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ I +T +I + L D AL + ++ I G+ + +C R
Sbjct: 307 TIKRIMEQTDTKITVSSLHD----GSALHLERVITIKGKP----EGVC-----------R 347
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL--MGPY-------------------- 256
++ L+++ + S+ S + + P + G+ P+ M Y
Sbjct: 348 AEQLVSAKLRQSYESDLAALAPQSLM-FPGLHPMAMMSAYPPPPPPHGPPARPPHYRGGG 406
Query: 257 ------------GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVC---PVANIGGVIGK 301
GGY G A Y +P +E LVC P +G +IG
Sbjct: 407 GGGPYPHPPAVGGGYMGG-AVHGPMGGYMSPSHGGVERE----LVCLYIPNTAVGAIIGT 461
Query: 302 GGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
GG+ I + SGA+IKV + DD K T+ T E R Q K+
Sbjct: 462 GGSSIRDMIMLSGASIKV--AQPNKDDPADAHERKV----TIVGTPECQWRAQSMIFNKV 515
Query: 362 ERDSGLI----SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASE 417
+ + + + VP++++G +IGKGG + E++RLT+A I+ LP+E+ + A+
Sbjct: 516 CYEGCMGNPDGTLRVEIFVPSNQVGRIIGKGGQTVRELQRLTRALIK-LPEES--QNANT 572
Query: 418 DDEMVQISGDL 428
++ V I GD
Sbjct: 573 EETPVHILGDF 583
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 8/128 (6%)
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKE 337
+ +F LR++ +G +IG+ G I QI Q+S A + V G + +IT+
Sbjct: 201 MRQSDFPLRILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHRKENAGSLEKVITIYGNP 260
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
E+ +A + + +Q S D L ++L + IG +IGK G+ I +
Sbjct: 261 --ENCSTACQKILEVMQQEASNTNRGDVPL-----KILAHNNLIGRIIGKSGNTIKRIME 313
Query: 398 LTKANIRI 405
T I +
Sbjct: 314 QTDTKITV 321
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 140/308 (45%), Gaps = 48/308 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ + I K +C + L +P
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 218 R----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGD 266
+ S + A +++ G P T + +A + G+T
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTG-- 233
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
+S L D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 234 FSAGL------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGS 287
Query: 327 DDCLITVS 334
D +T++
Sbjct: 288 TDRQVTIT 295
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 87/218 (39%), Gaps = 55/218 (25%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 94 -------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRV 123
S F G + Q A L K+H
Sbjct: 160 KQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLA 219
Query: 124 IAEE----LRGDEDSDGGHQVTAK-----LLVPSDQIGCVIGKGGQIVQNIRSETGAQIR 174
+ + G+ G +A+ L +P+D IGC+IG+ G + IR +GAQI+
Sbjct: 220 MQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIK 279
Query: 175 ILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
I +D V I+G A+ + A I RL
Sbjct: 280 IANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 312
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|118792630|ref|XP_320427.3| AGAP012103-PA [Anopheles gambiae str. PEST]
gi|116116989|gb|EAA00333.3| AGAP012103-PA [Anopheles gambiae str. PEST]
Length = 494
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 180/413 (43%), Gaps = 46/413 (11%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L +G+IIGR G ++ + +++++ + + GS E+ +T+Y +
Sbjct: 64 DFPLRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNVGSVEKAITIYGNPENCT 123
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+ + I E ++ + +S ++ K+L ++ IG +IGK G
Sbjct: 124 ------------------MACKKILEVMQQEANSTNKGEICLKILAHNNLIGRIIGKSGN 165
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ I +T +I + + S L + ++ + G + K QI+++L +
Sbjct: 166 TIKRIMQDTDTKITVSSINDISSFNL--ERIITVKGSIENMSKGESQISAKLRQSYENDL 223
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA---GDWSRSLYSAPRD 277
LA + + P A G MG G G TA G + +Y
Sbjct: 224 QALAP-----QTIMFPGLHPMAMMSTAGNG--MGFTGRTAGATASASGSGATGMYPGSNF 276
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+ +E + L P +G +IG G I I + SGA++K+ + E D + ++
Sbjct: 277 PIEVQETTY-LYIPNNAVGAIIGTKGLHIRNIIRFSGASVKI--APLEADKPQEQQTERK 333
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLLVPTSRIGCLIGKGGSI 391
T+ T EA + Q EK+ R+ G +S T + VP++++G +IGKGG
Sbjct: 334 V---TIIGTPEAQWKAQYLIFEKM-REEGFVSGTDDVRLTVEIFVPSAQVGRIIGKGGQN 389
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
+ E++R+T + I+ LP E+ +++ V I G + A ++ T + A
Sbjct: 390 VRELQRVTGSIIK-LP-EHTASAPVDEETTVHIIGPFFSVQSAQRRIRTMMLA 440
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 29/189 (15%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVV 90
F I ++T Y Y+ P +G+IIG G ++ + + + ++I + ER V
Sbjct: 276 FPIEVQETTYLYI-PNNAVGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTERKV 334
Query: 91 TVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPS 148
T+ + A +K +I E++R + G V T ++ VPS
Sbjct: 335 TIIGTPE-----------------AQWKAQ-YLIFEKMREEGFVSGTDDVRLTVEIFVPS 376
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
Q+G +IGKGGQ V+ ++ TG+ I++ EH S + + V I G V+ A +I
Sbjct: 377 AQVGRIIGKGGQNVRELQRVTGSIIKL--PEHTASAPVDEETTVHIIGPFFSVQSAQRRI 434
Query: 209 AS-RLHDNP 216
+ L NP
Sbjct: 435 RTMMLATNP 443
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 144/334 (43%), Gaps = 76/334 (22%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER++T+ +D F
Sbjct: 130 LRLLMHGKEVGSIIGKKGETVKRIREESSARINISE---GSCPERIITITGPTD--CVFR 184
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
FK+ + ++A G S VT +L++P+ Q G +IGKGG ++
Sbjct: 185 AFTMIT-------FKLEEDLMALVANGTVTSK--PPVTLRLVIPASQCGSLIGKGGSKIK 235
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------- 215
IR TGAQ+++ D LP+ R V ISG + + + I + + ++
Sbjct: 236 EIRETTGAQVQVAGD-LLPNSTERE---VTISGSQDAIIQCVKLICTVILESPPKGATIP 291
Query: 216 ----PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS-RS 270
P+ LLA S GS P+ +A GG D ++ +S
Sbjct: 292 YRPSPTPGTVLLAGNQVFEASDFGS-------HPLFSVA-----QGGV--DLQQTYAVQS 337
Query: 271 LYSAPRDDLS------------------------------SKEFSLRLVCPVANIGGVIG 300
Y P +L+ S+ S L+ P IG +IG
Sbjct: 338 HYGIPHSELAKLHQLSMQQQGLAPISQSATQVLPGGVEANSQTTSQELLIPNDLIGSIIG 397
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+ G IN+IRQ SGA IK+ S D +T+S
Sbjct: 398 RQGTKINEIRQVSGAQIKIGSQIDSTSDRHVTIS 431
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 40/215 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS--------TEGDDCLI---T 332
+LRL+ +G +IGK G + +IR+ES A I + S T DC+ T
Sbjct: 128 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGSCPERIITITGPTDCVFRAFT 187
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + + ED ++ V +P T RL++P S+ G LIGKGGS I
Sbjct: 188 MITFKLEEDLMALVANGTVTSKP-------------PVTLRLVIPASQCGSLIGKGGSKI 234
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG ++DA+IQ + + + +
Sbjct: 235 KEIRETTGAQVQVA-GDLLP---NSTEREVTISG----SQDAIIQCVKLICTVILESPPK 286
Query: 453 VSTFVPVLPYIPVSENGSDGLN----YESRDSKRH 483
+T +PY P G+ L +E+ D H
Sbjct: 287 GAT----IPYRPSPTPGTVLLAGNQVFEASDFGSH 317
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 60/187 (32%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
D G +T +LL+ ++G +IGK G+ V+ IR E+ A+I I + SC R ++
Sbjct: 121 DGAMGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG----SCPER---II 173
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
I+G V +A I +L ++ L + ++N G + P V
Sbjct: 174 TITGPTDCVFRAFTMITFKLEED-------LMALVAN---------GTVTSKPPV----- 212
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 213 --------------------------------TLRLVIPASQCGSLIGKGGSKIKEIRET 240
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 241 TGAQVQV 247
Score = 38.5 bits (88), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 6/87 (6%)
Query: 135 DGGHQVTAK-LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
+ Q T++ LL+P+D IG +IG+ G + IR +GAQI+I + S SD V
Sbjct: 375 EANSQTTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKI--GSQIDST---SDRHVT 429
Query: 194 ISGEASVVKKALCQIASRLHDNPSRSQ 220
ISG + A I S L S +Q
Sbjct: 430 ISGTPIAINLAQYLITSCLETAKSTAQ 456
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 140/303 (46%), Gaps = 51/303 (16%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 4 KEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------------- 47
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQN 164
A+FK +I ++L D S + VT +L+VP+ Q G +IGKGG ++
Sbjct: 48 ---AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 103
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
IR TGAQ+++ D LP+ R+ + I+G + + + QI + + S+S
Sbjct: 104 IRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLETLSQSPPKGV 159
Query: 225 SAISNSHSSSGSLV--GPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA--PRD--- 277
+ SS ++ G A T + G Y + D ++ + P
Sbjct: 160 TIPYRPKPSSSPVIFAGGQAYT-------IQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 212
Query: 278 ------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + D +
Sbjct: 213 TGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQV 272
Query: 332 TVS 334
T++
Sbjct: 273 TIT 275
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 74/179 (41%), Gaps = 49/179 (27%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY----------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 82 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVK 141
Query: 94 ------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVI 124
S F G + Q A L K+H +
Sbjct: 142 QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAM 201
Query: 125 AEEL-------RGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+ G D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 202 QQSHFPMTHGNTGFSGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 260
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 22/121 (18%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G +IGK G + ++R+ESGA I + +EG+ C + TL+ A+ +
Sbjct: 6 VGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITLAGPTNAIFKAF 53
Query: 355 PRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
+K+E D S + + T RL+VP S+ G LIGKGG I E+R T A ++
Sbjct: 54 AMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQ 113
Query: 405 I 405
+
Sbjct: 114 V 114
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 135/317 (42%), Gaps = 66/317 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL------ 212
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 213 -------HDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
PS S + A + S H++ + P P + + G
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ 235
Query: 256 YGGYKGDTAGDWSRSL-------------YSAPRDDLSSKEFSLRLVCPVANIGGVIGKG 302
Y + D ++ +SA D +S + + L P IG +IG+
Sbjct: 236 YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSASLD--ASTQTTHELTIPNNLIGCIIGRQ 293
Query: 303 GAIINQIRQESGAAIKV 319
GA IN+IRQ SGA IK+
Sbjct: 294 GANINEIRQMSGAQIKI 310
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
D Q T +L +P++ IGC+IG+ G + IR +GAQI+I S V I
Sbjct: 270 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE-----GSSGRQVTI 324
Query: 195 SGEASVVKKALCQIASRL 212
+G A+ + A I +RL
Sbjct: 325 TGSAASISLAQYLINARL 342
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 146/323 (45%), Gaps = 74/323 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-DKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G A + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTAHSIIECVKQICVVMLESPPK 172
Query: 219 SQHL----------------LASAISNSHS-----SSGSLVGPTAATPIVGIAPLMGPY- 256
+ A A+ H+ SS + + P + + +A GP+
Sbjct: 173 GVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDSSSAAISPQLSK-LHQLAMQQGPFP 231
Query: 257 -----GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
G+ G D S++ S + P IG +IG+ GA I++IRQ
Sbjct: 232 MATCNQGFTG---------------MDASAQACSHEMTIPNDLIGCIIGRQGAKISEIRQ 276
Query: 312 ESGAAIKVDSSSTEGDDCLITVS 334
SGA IK+ + D +T++
Sbjct: 277 MSGAQIKIANPVDGSTDRQVTIT 299
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIDKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIDKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 146/338 (43%), Gaps = 70/338 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC--------QIAS 210
G ++ IR TGAQ+++ D LP+ R+ + I K +C Q
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLEVSPQAPP 175
Query: 211 RLHDNPSRSQHLL---------ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+L P R + + + + S H++ + P P + + G Y +
Sbjct: 176 KLQCIPWRLKSSIYPQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQP 235
Query: 262 D----------------TAGD--WSRSLYSAPRD-------DLSSKEFSLRLVCPVANIG 296
D T G+ +S S+P D S++ S L P IG
Sbjct: 236 DLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIG 295
Query: 297 GVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 296 CIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 333
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 331
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 332 ITGSAASISLAQYLINVRL 350
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 130/297 (43%), Gaps = 56/297 (18%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + GS ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEF-------------NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 133
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-------- 222
I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 134 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 189
Query: 223 ---LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGGYK----GDTAGD 266
+ A + + G+ PT A P M P GG AG
Sbjct: 190 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTALAALAGS 249
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
R+ A R E + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 250 QLRTANPANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 300
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S + ++TVS
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSC--PERIVTVSG----- 73
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
T +A A + + E D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 74 -TTNAIFSAFTLITKKFEEF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 130
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 131 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 167
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI +C
Sbjct: 250 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI------SNCEE 303
Query: 187 R----SDELVQISGEASVVKKALCQIASRL 212
R +D + ISG V A I R+
Sbjct: 304 REGGNTDRTITISGNPDSVALAQYLINMRI 333
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 267 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSV-- 322
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 323 ALAQYLINMRISM 335
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|126341837|ref|XP_001363414.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Monodelphis domestica]
Length = 586
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/407 (21%), Positives = 175/407 (42%), Gaps = 74/407 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++++ + +
Sbjct: 197 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHASPEGCS 256
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 257 T------------------ACKIIMEIMQKEAQDTKFTDEIPLKILAHNNFVGRLIGKEG 298
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN---- 215
+ ++ I +T +I I + L + + + G KA +I ++ ++
Sbjct: 299 RNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSIETCGKAEEEIMKKIRESYESD 356
Query: 216 ---PSRSQHLLASAISNS-----HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDW 267
+ HLL N+ S+SG T P A PYG
Sbjct: 357 LSAMNLQAHLLPGLNLNALGLFPASTSGIPSPSTLGVPSAAAATNYLPYGQ--------- 407
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
++ ++ L P +G +IGK G I Q+ + +GA+IK+ T
Sbjct: 408 ------------QAETETVHLFIPAMAVGAIIGKMGQHIKQLSRFAGASIKIAPPETPDA 455
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIG 382
+ + ++ EA + Q R K++ ++ + ++ VP+ G
Sbjct: 456 KERMVI---------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAQIKVPSYAAG 506
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+IGKGG + E++ LT A + ++P++ +P E+DE +V+I+G
Sbjct: 507 RVIGKGGKTVNELQNLTSAEV-VVPRDQIP---DENDEVIVKITGHF 549
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 87/176 (49%), Gaps = 36/176 (20%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETN 100
+TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ER+V
Sbjct: 412 ETVHLFI-PAMAVGAIIGKMGQHIKQLSRFAGASIKIAPPETPDAKERMV---------- 460
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
++ +A FK R+ E G ++ ++ A++ VPS G VIG
Sbjct: 461 -------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEV---KLEAQIKVPSYAAGRVIG 510
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
KGG+ V +++ T A++ + +D+ +P +DE +V+I+G CQ+A R
Sbjct: 511 KGGKTVNELQNLTSAEVVVPRDQ-IPD---ENDEVIVKITGHFYA-----CQLAQR 557
>gi|354476373|ref|XP_003500399.1| PREDICTED: poly(rC)-binding protein 4 [Cricetulus griseus]
gi|344252773|gb|EGW08877.1| Poly(rC)-binding protein 4 [Cricetulus griseus]
Length = 403
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 133/285 (46%), Gaps = 37/285 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL- 222
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P + +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 223 ------LASAI--SNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
L + + +N S G A + + L G + +
Sbjct: 182 YHPSLSLGTVLLSTNQGFSVQGQYGAVAPAEVTKLQQLSGHAVPFASPSV---------V 232
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P D S++ S + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 233 PGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
GG +S +LRLV P + G +IGK G I +IR
Sbjct: 94 ------GG-------------------SVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
>gi|426217760|ref|XP_004003120.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Ovis aries]
Length = 599
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 179/399 (44%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN---- 215
+ ++ I ETG +I I + L + + + G A +I +L +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 352
Query: 216 --PSRSQHLLASAISNS----HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ Q L ++ S S+ S++ P A AP P+ + G +
Sbjct: 353 MLAANQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLCPP 412
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 413 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 470
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 471 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 131/298 (43%), Gaps = 53/298 (17%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-------- 222
I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 223 ---LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGGYK-----GDTAG 265
+ A + + G+ PT A P M P GG AG
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAG 253
Query: 266 DWSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
R+ A R E + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 254 SQLRTANPANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 305
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI +C
Sbjct: 255 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI------SNCEE 308
Query: 187 R----SDELVQISGEASVVKKALCQIASRL 212
R +D + ISG V A I R+
Sbjct: 309 REGGNTDRTITISGNPDSVALAQYLINMRI 338
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSV-- 327
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 328 ALAQYLINMRISM 340
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|432092458|gb|ELK25073.1| Poly(rC)-binding protein 4 [Myotis davidii]
Length = 403
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 134/288 (46%), Gaps = 43/288 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + + G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCSAPANGGTVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH-- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 222 ----------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
LL++ S S V P T + ++ P+G D
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQSQYGGVTPAEVTKLQQLSGHAVPFGSPSMVPGLD----- 236
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 237 ---PGAQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 18/203 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRR 397
+ ++ A + CS + G +S T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 ---AVSMIAFKLDEDLCSAP--ANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVST 455
T A +++ + LP + + V +SG DA+I + ++ A + + +GA
Sbjct: 130 TTGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIP 181
Query: 456 FVPVLPYIPVSENGSDGLNYESR 478
+ P L V + + G + +S+
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQSQ 204
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 79/189 (41%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L SA +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCSAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
G SR +LRLV P + G +IGK G I +IR
Sbjct: 94 -------------GGTVSR------------PPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 236 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|115497150|ref|NP_001068751.1| poly(rC)-binding protein 4 [Bos taurus]
gi|119390858|sp|Q0VCU0.1|PCBP4_BOVIN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|111304931|gb|AAI20010.1| Poly(rC) binding protein 4 [Bos taurus]
gi|296474781|tpg|DAA16896.1| TPA: poly(rC)-binding protein 4 [Bos taurus]
Length = 403
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 43/288 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH-- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 222 ----------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
LL++ S V P T + ++ P+ D
Sbjct: 182 YHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFASPSMVPGLD----- 236
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 237 ---PSTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
GG ++S +LRLV P + G +IGK G I +IR
Sbjct: 94 ------GG-------------------NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 141/314 (44%), Gaps = 47/314 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ + I K +C + L +P
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 218 R----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYK 260
+ S + A +++ G P T + +A P+ G+
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS 235
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
G + Y A D S++ S L P IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 236 GIESSSPEVKGYWAGLDA-SAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA 294
Query: 321 SSSTEGDDCLITVS 334
+ D +T++
Sbjct: 295 NPVEGSTDRQVTIT 308
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 68/231 (29%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 94 -------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRV 123
S F G + Q A L K+H
Sbjct: 160 KQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLA 219
Query: 124 IAEE----------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQI 161
+ + G E S D Q T+ +L +P+D IGC+IG+ G
Sbjct: 220 MQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAK 279
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ IR +GAQI+I +D V I+G A+ + A I RL
Sbjct: 280 INEIRQMSGAQIKIANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 325
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 139/327 (42%), Gaps = 59/327 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGDTAGDWSRSLYSA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
+ D ++ + P D S++ S L P IG +IG+ GA IN
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKIN 295
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVS 334
+I Q SGA IK+ + D +T++
Sbjct: 296 EIHQMSGAQIKIANPVEGSTDRQVTIT 322
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + I +GAQI+I +D V
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIHQMSGAQIKIANPVE-----GSTDRQVT 320
Query: 194 ISGEASVVKKALCQIASRLHDNPSRSQ 220
I+G A+ + A I L + SQ
Sbjct: 321 ITGSAASISLAQYLINVSLENAKPSSQ 347
>gi|402906002|ref|XP_003915796.1| PREDICTED: RNA-binding protein Nova-2 [Papio anubis]
Length = 618
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 162 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 221
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 222 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 278
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 279 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 335
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 336 LNISYANVAGPVANSNPTGSPYASPADVLP 365
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 89/179 (49%), Gaps = 19/179 (10%)
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITV 333
L E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+
Sbjct: 154 LEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQG 213
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCL 384
+++ + + + I VR P+ K E + L TT +L+VP S G +
Sbjct: 214 TAEAL--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLI 271
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
IGKGG+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 272 IGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 327
>gi|126314788|ref|XP_001377551.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2,
partial [Monodelphis domestica]
Length = 504
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 98/417 (23%), Positives = 186/417 (44%), Gaps = 59/417 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G +K L T+SK+ I + G+ E+ VT++++ +
Sbjct: 92 PPDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGASEKPVTIHASPEG 151
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
++ + R++ + +++ +V K+L + +G +IGK
Sbjct: 152 SS-----------------EACRRILEIMQKEADETKAVEEVPLKILAHNSLVGRLIGKE 194
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +TG +I I + L + + + G A +I +L ++N
Sbjct: 195 GRNLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGTIEACSSAEVEIMRKLREAYEN 252
Query: 216 PSRSQHLLASAISNSH------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + S I + S+G + P+AA P A P+ + +G
Sbjct: 253 DMLTVNQQGSLIPGLNLSALGIFSTGLSMLPSAAGPRGAAAASYNPFASHSAYLSG---- 308
Query: 270 SLYSAPRDDLSSKEFSL------RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
LY AP+ + + + L P +G +IGK G I Q+ + + A+IK+ +
Sbjct: 309 -LYGAPQIGVFPHQHPVPEQEVVYLFIPTQAVGAIIGKKGHHIKQLARFARASIKI--AP 365
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPT 378
EG D V + ++ EA + Q R K++ ++ + + VP+
Sbjct: 366 AEGPD----VGERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLKAHIRVPS 418
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
S G +IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 419 SAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVKIIGHFFASQTA 471
>gi|55742577|ref|NP_998282.1| poly(rC)-binding protein 4 [Danio rerio]
gi|33604078|gb|AAH56323.1| Zgc:65870 [Danio rerio]
gi|41946775|gb|AAH65955.1| Zgc:65870 [Danio rerio]
Length = 442
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 146/326 (44%), Gaps = 60/326 (18%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER++T+ A++ F
Sbjct: 7 LRLLMHGKEVGSIIGKKGETVKRIREESSARINISE---GSCPERIITITGATE--CVFR 61
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
K+ + + A G S VT +L++P+ Q G +IGKGG ++
Sbjct: 62 AFTMIT-------IKLEEDLAALVANGTVTSK--PPVTLRLVIPASQCGSLIGKGGSKIK 112
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL- 222
IR +TGAQ+++ D LP+ R V ISG + + + I + + ++P + +
Sbjct: 113 EIREKTGAQVQVAGD-LLPNSTERG---VTISGSQDAIIQCVKLICTVILESPPKGATIP 168
Query: 223 -LASAISNSHSSSGSLVGPT---AATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
S + +G+ V T A+ P+ +A GG A ++ Y P +
Sbjct: 169 YRPSPAPGAVLLAGNQVFETSEFASHPLFSVA-----QGGLDLQQAYTV-QNQYGIPHSE 222
Query: 279 L------------------------------SSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
L SS+ S L+ P IG +IG+ G IN+
Sbjct: 223 LAKLHQLSMQQGLGPIAQATATQVLPAGIESSSQTASQELLIPNDLIGSIIGRQGTKINE 282
Query: 309 IRQESGAAIKVDSSSTEGDDCLITVS 334
IRQ SGA IK+ S D +T++
Sbjct: 283 IRQVSGAQIKIGSQLDSTSDRHVTIT 308
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 100/214 (46%), Gaps = 38/214 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LRL+ +G +IGK G + +IR+ES A I + S + +IT++
Sbjct: 5 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGSC--PERIITIT--------- 53
Query: 344 SATIEAVVRLQPRCSEKIERD-SGLIS---------FTTRLLVPTSRIGCLIGKGGSIIT 393
E V R + K+E D + L++ T RL++P S+ G LIGKGGS I
Sbjct: 54 -GATECVFRAFTMITIKLEEDLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIK 112
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG ++DA+IQ + + + +
Sbjct: 113 EIREKTGAQVQV-AGDLLP---NSTERGVTISG----SQDAIIQCVKLICTVILESPPKG 164
Query: 454 STFVPVLPYIPVSENGSDGLN----YESRDSKRH 483
+T +PY P G+ L +E+ + H
Sbjct: 165 AT----IPYRPSPAPGAVLLAGNQVFETSEFASH 194
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+ A+I I + SC R ++ I+G
Sbjct: 5 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG----SCPER---IITITGATE 57
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
V +A I +L ++ LA+ ++N G + P V
Sbjct: 58 CVFRAFTMITIKLEED-------LAALVAN---------GTVTSKPPV------------ 89
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+LRLV P + G +IGKGG+ I +IR+++GA ++V
Sbjct: 90 -------------------------TLRLVIPASQCGSLIGKGGSKIKEIREKTGAQVQV 124
>gi|313245372|emb|CBY40123.1| unnamed protein product [Oikopleura dioica]
Length = 412
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 170/379 (44%), Gaps = 54/379 (14%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSA 95
G DT + L P +G+IIG+GG V+Q+ S+ R+ PGS+ +V T+Y A
Sbjct: 34 GSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSD-KVATIYGA 92
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ A A + I E +R +E + ++ K+L + IG +I
Sbjct: 93 PEACGA-------------AAIR-----ILEIVRKEEKDN---ELPLKVLAHNALIGRLI 131
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH-- 213
G+ G+ +++++ +TG +I I L + D + I GE + +A QI +L
Sbjct: 132 GRDGRNLKHVQDKTGTRIAISSMHELSPYNM--DRTISIHGEVKGISEAEQQITEKLRQF 189
Query: 214 --DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD-TAGDWSRS 270
D + SQ L +++ + A P ++ Y+G + S+S
Sbjct: 190 ETDMAAMSQQSLYPGLNSQQMQMFPGLQSPTAPPAYNVS--------YQGSYFFKNVSQS 241
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
++ + ++ + ++ L+ P +G +IG G I I + +GA+I++ ++
Sbjct: 242 VFFSGNSSSNNTQETVTLLIPSGAVGAIIGSRGTHIRNISRIAGASIRIHVNADRDAKAR 301
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS----FTTRLLVPTSRIGCLIG 386
+T+ E+ + Q +K++++ + TT++ +P +G +IG
Sbjct: 302 VTIV----------GVPESQWKAQFCIFDKLKQEGWFGNEEGRLTTQITIPGKLVGRIIG 351
Query: 387 KGGSIITEMRRLTKANIRI 405
KGG + E++R+T + + I
Sbjct: 352 KGGVNVRELQRITSSEVTI 370
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 14/160 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE--GDDCLITVSSKEFFEDTL 343
L+++ P + +G +IGKGG+ + QI Q + +VD E G D + T+
Sbjct: 40 LKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATIYGAPEACGAA 99
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ I +VR K E+D+ L ++L + IG LIG+ G + ++ T I
Sbjct: 100 AIRILEIVR-------KEEKDNEL---PLKVLAHNALIGRLIGRDGRNLKHVQDKTGTRI 149
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
I L D + I G++ +A Q+ +LR
Sbjct: 150 AISSMHELS--PYNMDRTISIHGEVKGISEAEQQITEKLR 187
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 133/304 (43%), Gaps = 53/304 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFED 104
R + +++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV S TNA
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV---SGTTNAIFS 80
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ + + D G Q+ +L+VP+ Q G +IGK G ++
Sbjct: 81 AFTLITKKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-- 222
IR TG I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 132 IRQTTGCSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPY 187
Query: 223 ---------LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGGYK---- 260
+ A + + G+ PT A P M P GG
Sbjct: 188 RPKPQVTGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAA 247
Query: 261 -GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAI 317
AG R+ A R E + V+N IG +IGKGG I +IRQ SGA I
Sbjct: 248 LAALAGSQLRTANPANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMI 301
Query: 318 KVDS 321
++ +
Sbjct: 302 RISN 305
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVAL 329
Query: 434 A--LIQVMTRL-RANLFDR 449
A LI + L +ANL ++
Sbjct: 330 AQYLINMSVELQKANLLEQ 348
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI E
Sbjct: 255 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGG-- 312
Query: 187 RSDELVQISGEASVVKKALCQ 207
+D + ISG V AL Q
Sbjct: 313 NTDRTITISGNPDSV--ALAQ 331
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 97 DE 98
++
Sbjct: 162 EQ 163
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 150/343 (43%), Gaps = 80/343 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP-------YGGY-- 259
S + A SSGS P A + + L GP G Y
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAI 232
Query: 260 ---------------------KGDTAGDWSRSLYSAPRD-------DLSSKEFSLRLVCP 291
G+T +S S+P + D S++ S L P
Sbjct: 233 PQPDLTKLHQLAMQQSHFPMSHGNTG--FSGVESSSPDEKGYWAGLDASAQTTSHELTIP 290
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 291 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 333
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS +SS V
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNSTASSRPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 42.0 bits (97), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 331
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 332 ITGSAASISLAQYLINVRL 350
>gi|343427422|emb|CBQ70949.1| related to PBP2-PAB1 binding protein [Sporisorium reilianum SRZ2]
Length = 416
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 118/265 (44%), Gaps = 28/265 (10%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+ G+ + ++R + +++ I E +PG+ ER++TV D A
Sbjct: 127 IIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPLD--------------AVSKA 172
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT + +VP+ ++G VIGK G ++ I+ +GA++
Sbjct: 173 FGLIVRRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARL-TA 231
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP R ++ ISG A V A+ + + L ++ R+ + L ++G
Sbjct: 232 GEAMLPGSTER---VLSISGVADAVHIAVYYVGTILLEHQDRNANNLP-----YRPTAG- 282
Query: 237 LVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
GP+ P G P P GY + L + ++ P
Sbjct: 283 --GPSTRPPAPGANPYAAPQQPFGYGAPAPPFGGAPAGAGGAPQLPPGSQTQQIFIPNDL 340
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
+G +IGKGG+ IN+IR S + IK+
Sbjct: 341 VGCIIGKGGSKINEIRSMSASHIKI 365
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+ + + S+R + ++ +IGK G IN+IR +S A + + + ++TVS
Sbjct: 107 ETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNISEIIPGNPERILTVSGPL 166
Query: 338 FFEDTLSATIEAVVRLQPRCS-EKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITE 394
D +S +VR R + E ++ S G S T R +VP SR+G +IGK GS I E
Sbjct: 167 ---DAVSKAFGLIVR---RINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKE 220
Query: 395 MRRLTKANI 403
++ + A +
Sbjct: 221 IQEASGARL 229
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEAS 199
T ++ +P+D +GC+IGKGG + IRS + + I+I++ + +E LV I+G
Sbjct: 331 TQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGPPP 390
Query: 200 VVKKALCQIASRLHDNPSR 218
++ A+ + RL R
Sbjct: 391 NIQMAVSLLYQRLEQEKMR 409
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 48/82 (58%), Gaps = 4/82 (4%)
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL-PKENLPKIASEDDEMVQISG- 426
S T ++ +P +GC+IGKGGS I E+R ++ ++I+I+ P + S ++ +V I+G
Sbjct: 329 SQTQQIFIPNDLVGCIIGKGGSKINEIRSMSASHIKIMEPGAGIAAGGSGNERLVTITGP 388
Query: 427 --DLDLAKDALIQVMTRLRANL 446
++ +A L Q + + + L
Sbjct: 389 PPNIQMAVSLLYQRLEQEKMRL 410
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 26 RRYTGDDRDQ-FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-P 83
RR + DQ + G + R++ P ++GS+IG+ G +K+++ + +++ GE + P
Sbjct: 178 RRINDEPFDQPSVPGSKSVTIRFIVPNSRMGSVIGKQGSKIKEIQEASGARLTAGEAMLP 237
Query: 84 GSEERVVTVYSASD 97
GS ERV+++ +D
Sbjct: 238 GSTERVLSISGVAD 251
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 130 GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSD 189
GD Q++ + L+ + +IGK G+ + IR ++ A++ I E +P R
Sbjct: 103 GDSSETQATQISMRTLIVTSDASIIIGKSGKHINEIRDKSNARLNI--SEIIPGNPER-- 158
Query: 190 ELVQISGEASVVKKALCQIASRLHDNP 216
++ +SG V KA I R++D P
Sbjct: 159 -ILTVSGPLDAVSKAFGLIVRRINDEP 184
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 135/299 (45%), Gaps = 48/299 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ + I K +C + L +P
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 218 R----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYK 260
+ S + A +++ G P T + +A P+ G+
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS 235
Query: 261 GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
G + Y A D +S + + L P IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 236 GIESSSPEVKGYWASLD--ASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 292
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 77/193 (39%), Gaps = 62/193 (32%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 94 -------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRV 123
S F G + Q A L K+H
Sbjct: 160 KQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLA 219
Query: 124 IAE--------------------ELRGDEDS-DGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
+ + E++G S D Q T +L +P++ IGC+IG+ G +
Sbjct: 220 MQQSHFPMTHGNTGFSGIESSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGANI 279
Query: 163 QNIRSETGAQIRI 175
IR +GAQI+I
Sbjct: 280 NEIRQMSGAQIKI 292
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|296477630|tpg|DAA19745.1| TPA: neuro-oncological ventral antigen 2-like [Bos taurus]
Length = 640
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 184 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 243
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 244 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 300
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 301 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 357
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 358 LNISYANVAGPVANSNPTGSPYASPADVLP 387
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 102/216 (47%), Gaps = 36/216 (16%)
Query: 259 YKGDTAGDWSR-----SLYSAP----------RDDLSSKE--FSLRLVCPVANIGGVIGK 301
+ G G WS+ LY P D++++E + L+++ P G +IGK
Sbjct: 139 FNGSEQGLWSQVGLKSQLYHFPGGTTQAVPDGYPDVANEEGEYFLKVLIPSYAAGSIIGK 198
Query: 302 GGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPR 356
GG I Q+++E+GA IK+ S T CL+ +++ + + + I VR P+
Sbjct: 199 GGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL--NAVHSFIAEKVREIPQ 256
Query: 357 CSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
K E + L TT +L+VP S G +IGKGG+ + + + A +++
Sbjct: 257 AMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQ 316
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 317 K---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 349
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 141/318 (44%), Gaps = 64/318 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I+I E ER++T+ + TNA
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEG--NCPERIITL---TGPTNAIFKA 71
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ ++K+ + + + + S VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 72 FAMI------IYKLEEDINSSMTKSTAAS---RLVTLRLVVPATQCGSLIGKGGCKIKEI 122
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN---------- 215
R TGAQ+++ D LP+ R+ + I+G V K + QI + +
Sbjct: 123 RKSTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTKCVKQICLVMLETLSHSPQGKVK 178
Query: 216 -------PSRS-------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAPL------ 252
PSRS Q + A H++ P A I G I+PL
Sbjct: 179 TILYQPMPSRSPVTCAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLNLAKLN 238
Query: 253 -----------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGK 301
M G+ G + Y A D +S + + L P IG +IG+
Sbjct: 239 QVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQITHELTIPNNLIGCIIGR 296
Query: 302 GGAIINQIRQESGAAIKV 319
G IN+IRQ SGA IK+
Sbjct: 297 QGTNINEIRQMSGAQIKI 314
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 5/123 (4%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA IK+ + +T + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEGNCPERIITLTGPTNAIFK--- 70
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTT-RLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
A + +L+ + + + + T RL+VP ++ G LIGKGG I E+R+ T A
Sbjct: 71 -AFAMIIYKLEEDINSSMTKSTAASRLVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQ 129
Query: 403 IRI 405
+++
Sbjct: 130 VQV 132
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 61/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I+IL+ +C R ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEG----NCPER---IITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ I++S + S TAA+ +V
Sbjct: 67 AIFKAFAMIIYKLEED-----------INSSMTKS------TAASRLV------------ 97
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 98 -------------------------TLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQV 132
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 71/339 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 78
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 79 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 128
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 129 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 187
Query: 212 --LHDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 188 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 247
Query: 260 KGD----------------TAGD--WSRSLYSAPRD------DLSSKEFSLRLVCPVANI 295
+ D T G+ +S S+P D S++ S L P I
Sbjct: 248 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLI 307
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
G +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 308 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 346
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 19 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 71
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 72 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 105
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 106 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 138
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 139 TGAQVQV 145
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 73
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 74 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 133
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 134 EIRESTGAQVQV 145
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 282 EVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VE 336
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
+D V I+G A+ + A I RL
Sbjct: 337 GSTDRQVTITGSAASISLAQYLINVRL 363
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 71/339 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGD----------------TAGD--WSRSLYSAPRD------DLSSKEFSLRLVCPVANI 295
+ D T G+ +S S+P D S++ S L P I
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDLI 295
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
G +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 296 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 334
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 270 EVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VE 324
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
+D V I+G A+ + A I RL
Sbjct: 325 GSTDRQVTITGSAASISLAQYLINVRL 351
>gi|302792551|ref|XP_002978041.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
gi|300154062|gb|EFJ20698.1| hypothetical protein SELMODRAFT_108378 [Selaginella moellendorffii]
Length = 324
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 147/331 (44%), Gaps = 50/331 (15%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVY-S 94
G T R+L GS+IG+GG + + + ++I++ E PG+ +RV + S
Sbjct: 11 GETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGS 70
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+D AF+ +I ++ D++ D + KLLVP G +
Sbjct: 71 LADVLTAFQ-------------------LIISKIIKDDNQDDTKSIQVKLLVPKTVCGAI 111
Query: 155 IGKGGQIVQNIRSETGAQIRI-LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
IGKGG ++ ++ A I++ +D+ LP D +V I G + KA+ I ++L
Sbjct: 112 IGKGGSNIKKFVEDSQASIKLSSQDQLLPGVI---DRIVTIGGNVDQIIKAVTLILTKLT 168
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGP-TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
+ S ++ ++S LV P T TP + + Y G +
Sbjct: 169 EESSYTE-----------TTSTPLVYPGTGPTPFI----VRCVYHASPGLQNLRRNGPGP 213
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P + + S+ + P +IG ++G+ G + +++Q SGA IKV S GD
Sbjct: 214 PMPVAYVGALTSSVTIGIPDEHIGFILGRAGKTLQELQQSSGAKIKV---SDRGD----F 266
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
V+ E+ + T+ + EA+ Q ++K+++
Sbjct: 267 VTGTEYRKVTMIGSGEAIQAAQFLLTQKVQQ 297
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT-- 342
+LR + G VIGKGG+ I+ + +SGA I++ + E+F T
Sbjct: 16 NLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRN-------------HEYFPGTSD 62
Query: 343 ----LSATIEAVVRLQPRCSEKIERDSG---LISFTTRLLVPTSRIGCLIGKGGSIITEM 395
LS ++ V+ KI +D S +LLVP + G +IGKGGS I +
Sbjct: 63 RVAVLSGSLADVLTAFQLIISKIIKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKF 122
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
++A+I++ ++ L + D +V I G++D A+ ++T+L E +
Sbjct: 123 VEDSQASIKLSSQDQL--LPGVIDRIVTIGGNVDQIIKAVTLILTKLTEESSYTETTSTP 180
Query: 456 FV-----PVLPYIPVSENGSDGLNYESRDSKRHGRGPP 488
V P + + S GL ++ +R+G GPP
Sbjct: 181 LVYPGTGPTPFIVRCVYHASPGL----QNLRRNGPGPP 214
Score = 38.5 bits (88), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCA 185
E E++ G + LV + G VIGKGG + + ++++GA+I++ ++ E+ P
Sbjct: 2 EFLFAENNAGETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGT- 60
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
SD + +SG + V A I S++
Sbjct: 61 --SDRVAVLSGSLADVLTAFQLIISKI 85
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 141/319 (44%), Gaps = 57/319 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQ----VTAKLLVPSDQIGCVIGKGG 159
A+FK +I EE+ ++ VT +L+VP+ Q G +IGKGG
Sbjct: 67 ---------AIFKAFAMIIDKLEEVFSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGG 117
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPSR 218
++ IR TGAQ+++ D LP+ R+ + I K +C + L +P +
Sbjct: 118 CKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPK 176
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKG 261
S + A +++ G P T + +A P+ G+ G
Sbjct: 177 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSG 236
Query: 262 ------DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
+ G W+ D S++ S L P IG +IG+ GA IN+IRQ SGA
Sbjct: 237 IESSSPEVKGYWAGL-------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGA 289
Query: 316 AIKVDSSSTEGDDCLITVS 334
IK+ + D +T++
Sbjct: 290 QIKIANPVEGSTDRQVTIT 308
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L + + +S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEE-------VFSSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 68/231 (29%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 94 -------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRV 123
S F G + Q A L K+H
Sbjct: 160 KQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLA 219
Query: 124 IAEE----------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQI 161
+ + G E S D Q T+ +L +P+D IGC+IG+ G
Sbjct: 220 MQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAK 279
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ IR +GAQI+I +D V I+G A+ + A I RL
Sbjct: 280 INEIRQMSGAQIKIANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 325
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + + + + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTNAIFK--- 70
Query: 344 SATIEAVVRLQPRCSEKIERDSGL--ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
A + +L+ S + + T RL+VP S+ G LIGKGG I E+R T A
Sbjct: 71 -AFAMIIDKLEEVFSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 129
Query: 402 NIRI 405
+++
Sbjct: 130 QVQV 133
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 144/313 (46%), Gaps = 62/313 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHL----------LASAISNSHSSSGSLVGPTA-ATPIVGIA----PL-MGPYG-GYKG 261
+ + A +++ G P T + +A P MGP G++G
Sbjct: 173 GVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSPFPMGPNNPGFQG 232
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D S++ S + P IG +IG+ G+ IN+IRQ SGA IK+ +
Sbjct: 233 GM--------------DASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIAN 278
Query: 322 SSTEGDDCLITVS 334
D +T++
Sbjct: 279 PVEGSADRQVTIT 291
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 51/214 (23%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSA-------- 95
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECV 159
Query: 96 -----------------------SDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
S F G + Q A L K+H + +
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 128 L----RGDEDSDGGHQVTAK-----LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
+ GG +A+ + +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 PFPMGPNNPGFQGGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANP 279
Query: 179 EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+D V I+G A+ + A I +RL
Sbjct: 280 -----VEGSADRQVTITGSAASISLAEYLINARL 308
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D S + + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|432848574|ref|XP_004066413.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 349
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 140/315 (44%), Gaps = 43/315 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R D+ ++I I E ER+VT
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVTXXXXXXXI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS-------R 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P R
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGAPEAIIQCVKQICVVMLESPPKGATIPYR 181
Query: 219 SQHLLASAISNSHSSSGSLVGPTAA--TPIVGIAPL-----MGPYGGYKGDTAGDWSRSL 271
+ I + +G + A + ++ PL G Y D + ++
Sbjct: 182 PKPASTPVIFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQGQYAIPHPDLSKLHQLAM 241
Query: 272 YSAPRD------------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P D S++ + L P IG +IG+ G IN+IRQ SGA IK+
Sbjct: 242 QQTPFTPLGQTTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 301
Query: 320 DSSSTEGDDCLITVS 334
++ + IT++
Sbjct: 302 ANAMEGSSERQITIT 316
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 94/196 (47%), Gaps = 44/196 (22%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD--DCLIT--------- 332
++RL+ +G +IGK G + ++R++SGA I + +EG+ + ++T
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINI----SEGNCPERIVTXXXXXXXIF 71
Query: 333 ----VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKG 388
+ + +F ED +++ + +P T RL+VP S+ G LIGKG
Sbjct: 72 KAFAMIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKG 118
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
GS I EMR T A +++ + LP + + V ISG A +A+IQ + ++ + +
Sbjct: 119 GSKIKEMRESTGAQVQVA-GDMLP---NSTERAVTISG----APEAIIQCVKQICVVMLE 170
Query: 449 REGAVSTFVPVLPYIP 464
+T +PY P
Sbjct: 171 SPPKGAT----IPYRP 182
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 62/189 (32%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R ++GA+I I + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V + KA IA + ++ I NS S+S P + P V
Sbjct: 60 IVTXXXXXXXIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV--- 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 127 ESTGAQVQV 135
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 135 DGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D +Q T +L +P+D IGC+IG+ G + IR +GAQI+I + S+ +
Sbjct: 260 DASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIAN-----AMEGSSERQIT 314
Query: 194 ISGEASVVKKALCQIASRLHD 214
I+G + + A I +R D
Sbjct: 315 ITGTPANISLAQYLINARFRD 335
>gi|26346528|dbj|BAC36915.1| unnamed protein product [Mus musculus]
Length = 403
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 136/297 (45%), Gaps = 46/297 (15%)
Query: 39 GPEDTV---YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYS 94
GPE ++ R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI-- 65
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ T A ++ FK+ + + A G S VT +L++P+ Q G +
Sbjct: 66 -TGSTAAVFHAVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSL 116
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IGK G ++ IR TGAQ+++ D LP+ R+ V +SG + + QI + +
Sbjct: 117 IGKAGTKIKEIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILG 172
Query: 215 NPSRSQH------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
+P + LL++ S V P T + ++ P+
Sbjct: 173 SPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVV 232
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 233 PGLD--------PSTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRI 405
T A +++
Sbjct: 131 TGAQVQV 137
>gi|332856422|ref|XP_524310.3| PREDICTED: RNA-binding protein Nova-2 [Pan troglodytes]
Length = 607
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 151 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 210
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 211 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 267
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 268 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 324
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 325 LNISYANVAGPVANSNPTGSPYASPADVLP 354
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 147 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 206
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 207 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 264
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 265 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 316
>gi|335299138|ref|XP_003358505.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Sus scrofa]
Length = 403
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 137/289 (47%), Gaps = 45/289 (15%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKG---- 177
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG-----------YKGDTAGDWSRSLY 272
A+ + S G+++ T G + + G YG G S S+
Sbjct: 178 ATIPYHPSLSLGTVLLSTNQ----GFS-VQGQYGAVTPAEVTKLQQLSGHAVPFASPSMV 232
Query: 273 SA--PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 233 PGLDPGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 126/295 (42%), Gaps = 46/295 (15%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ----- 354
A+I + GA I S + G L T + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGH 222
Query: 355 --PRCSEKIER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
P S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 223 AVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 134/293 (45%), Gaps = 49/293 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ + I K +C + L +P
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 218 R----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGD 266
+ S + A +++ G P T + +A + G+T
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTG-- 233
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+SA D +S + + L P IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 234 -----FSASLD--ASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 279
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 49/180 (27%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 94 -------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRV 123
S F G + Q A L K+H
Sbjct: 160 KQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLA 219
Query: 124 IAEE----LRGDE----DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+ + G+ D Q T +L +P++ IGC+IG+ G + IR +GAQI+I
Sbjct: 220 MQQSHFPMTHGNTGFSASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 279
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 145/319 (45%), Gaps = 61/319 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYKG 261
S + A +++ G P T + +A P+ G+ G
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSG 232
Query: 262 ------DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
+ G W+ D S++ S L P IG +I + GA IN+IRQ SGA
Sbjct: 233 IESSSPEVKGYWAGL-------DASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGA 285
Query: 316 AIKVDSSSTEGDDCLITVS 334
IK+ + D +T++
Sbjct: 286 QIKIANPVEGSTDRQVTIT 304
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 88/227 (38%), Gaps = 64/227 (28%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 94 ---------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
S F G + Q A L K+H + +
Sbjct: 160 KQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQS 219
Query: 128 ----------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNI 165
G E S D Q T+ +L +P+D IGC+I + G + I
Sbjct: 220 HFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIRRQGAKINEI 279
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
R +GAQI+I +D V I+G A+ + A I RL
Sbjct: 280 RQMSGAQIKIANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 321
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 139/308 (45%), Gaps = 48/308 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ + I K +C + L +P
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 218 R----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGD 266
+ S + A +++ G P T + +A + G+T
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTG-- 233
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
+S L D S++ S L P IG +IG+ GA IN+IRQ SGA IK +
Sbjct: 234 FSAGL------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGS 287
Query: 327 DDCLITVS 334
D +T++
Sbjct: 288 TDRQVTIT 295
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 86/218 (39%), Gaps = 55/218 (25%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 94 -------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRV 123
S F G + Q A L K+H
Sbjct: 160 KQICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLA 219
Query: 124 IAEE----LRGDEDSDGGHQVTAK-----LLVPSDQIGCVIGKGGQIVQNIRSETGAQIR 174
+ + G+ G +A+ L +P+D IGC+IG+ G + IR +GAQI+
Sbjct: 220 MQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIK 279
Query: 175 ILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+D V I+G A+ + A I RL
Sbjct: 280 TANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 312
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|348581993|ref|XP_003476761.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Cavia porcellus]
Length = 403
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 139/303 (45%), Gaps = 43/303 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH-- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 222 ----------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
LL++ S V P T + ++ P+ D
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLD----- 236
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + I
Sbjct: 237 ---PAAQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHI 289
Query: 332 TVS 334
T++
Sbjct: 290 TIT 292
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
GG +S +LRLV P + G +IGK G I +IR
Sbjct: 94 ------GG-------------------SVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
>gi|397495989|ref|XP_003818826.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Pan paniscus]
gi|397495991|ref|XP_003818827.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan paniscus]
Length = 403
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 43/288 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH-- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 222 ----------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
LL++ S V P T + ++ P+ D
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSMVPGLD----- 236
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 237 ---PGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPR 356
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQL 219
Query: 357 CSEKIE---------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SSHAVPFATPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|354490712|ref|XP_003507500.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cricetulus griseus]
Length = 731
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/420 (21%), Positives = 191/420 (45%), Gaps = 67/420 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 345 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKPITILSTPEG 404
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+A A ++ ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 405 ASA----------ACKSILEIMHK-------EAQDTKLTEEVPLKILAHNNFVGRLIGKE 447
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G +A +I ++ ++N
Sbjct: 448 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCARAEEEIMKKIRESYEN 505
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP---LMGPYGGYKGDTAGDWSRSLY 272
S +L A I + ++ L PT+ P P + PY ++
Sbjct: 506 DIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTMTPPYPQFE------------ 553
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
S+ ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D +
Sbjct: 554 -------QSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVR 604
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ ++ EA + Q R KI+ ++ + + + VP+ G +IGK
Sbjct: 605 MV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGK 657
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
GG + E++ L+ A + ++P++ P E+++ +V+I+G +A+ + +++++++
Sbjct: 658 GGKTVNELQNLSSAEV-VVPRDQTP---DENNQVVVKITGHFYACQVAQRKIQEILSQVK 713
>gi|58259741|ref|XP_567283.1| cytoplasm protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134116752|ref|XP_773048.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255668|gb|EAL18401.1| hypothetical protein CNBJ3240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229333|gb|AAW45766.1| cytoplasm protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 357
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 66/337 (19%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP+ R L + IIGRGG V ++R + +++ + E++PG+ ER++ V D
Sbjct: 76 GPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLD- 134
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A F + R I +E G VT K ++P+ ++G VIGKG
Sbjct: 135 -------------AVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKG 181
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ I+ +GA++ + LP R ++ +SG A V A+ I + L + R
Sbjct: 182 GSKIKEIQEASGARLN-ASEAMLPGSTER---VLSVSGVADAVHIAVYYIGTILLEYQDR 237
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
P+ AT G YK SR
Sbjct: 238 Y--------------------PSNAT------------GSYK----QSQSRGPPPNSNAP 261
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST--------EGDDCL 330
+ ++ P A +G +IG+GG+ IN+IR +S I+V T ++ L
Sbjct: 262 PPPGMQTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERL 321
Query: 331 ITVSSKEFFEDTLSATIEAVV-RLQPRCSEKIERDSG 366
+T++ + D ++A + + R++ ++ +E+++G
Sbjct: 322 VTITG---YPDNINAAVALLYSRVEAERAKLVEQNAG 355
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ D ++ S+R + + +IG+GGA +N+IR++S A + V S + ++ VS
Sbjct: 72 KPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSG 131
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
D ++ +VR + G + T + ++P SR+G +IGKGGS I E+
Sbjct: 132 P---LDAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKEI 188
Query: 396 RRLTKANI 403
+ + A +
Sbjct: 189 QEASGARL 196
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 85/185 (45%), Gaps = 21/185 (11%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSK--- 336
S+ +++ + P + +G VIGKGG+ I +I++ SGA + + G + +++VS
Sbjct: 160 SRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVADA 219
Query: 337 -------------EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTR-LLVPTSRIG 382
E+ + S + + Q R T+ + +P + +G
Sbjct: 220 VHIAVYYIGTILLEYQDRYPSNATGSYKQSQSRGPPPNSNAPPPPGMQTQQIFIPNALVG 279
Query: 383 CLIGKGGSIITEMRRLTKANIRIL-PKENLP--KIASEDDEMVQISGDLDLAKDALIQVM 439
+IG+GGS I E+R + IR+ P +P A+ ++ +V I+G D A+ +
Sbjct: 280 AIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDNINAAVALLY 339
Query: 440 TRLRA 444
+R+ A
Sbjct: 340 SRVEA 344
>gi|194762728|ref|XP_001963486.1| GF20264 [Drosophila ananassae]
gi|190629145|gb|EDV44562.1| GF20264 [Drosophila ananassae]
Length = 590
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 189/426 (44%), Gaps = 77/426 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 121 HRKENV-GSVEKSITIYGNPENCTNAC-------------------KRILEVMQQEALST 160
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 161 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 218
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 219 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 262
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL F L P +G +IG
Sbjct: 263 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTF---LYIPNNAVGAIIG 319
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 320 TKGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 374
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 375 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 432
Query: 415 ASEDDE 420
+ D+E
Sbjct: 433 SGGDEE 438
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 302 QETTFLYI-PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 360
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 361 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 403
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 404 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLS 463
Query: 214 DNP 216
NP
Sbjct: 464 TNP 466
>gi|300798415|ref|NP_001178812.1| poly(rC)-binding protein 4 [Rattus norvegicus]
Length = 403
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 43/288 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH-- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 222 ----------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
LL++ S V P T + ++ P+ D
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLD----- 236
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 237 ---PSTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 80/189 (42%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
GG +S +LRLV P + G +IGK G I +IR
Sbjct: 94 ------GG-------------------SVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 144/339 (42%), Gaps = 71/339 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPKGVTI 175
Query: 212 -LHDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK 260
PS S + A + S H++ + P P + + G Y +
Sbjct: 176 PYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQ 235
Query: 261 GD----------------TAGD--WSRSLYSAPRD-------DLSSKEFSLRLVCPVANI 295
D T G+ +S S+P D S++ S L P I
Sbjct: 236 PDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLI 295
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
G +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 296 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 334
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 278 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE-----GSTDRQVT 332
Query: 194 ISGEASVVKKALCQIASRLHDNPSRSQ 220
I+G A+ + A I L + SQ
Sbjct: 333 ITGSAASISLAQYLINVSLENAKPSSQ 359
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 55/297 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLE---- 168
Query: 219 SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
+++ G P T + +A + G+T +S L
Sbjct: 169 -----------AYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTG--FSAGL------ 209
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 210 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 266
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 87/190 (45%), Gaps = 28/190 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 159
Query: 100 --------NAFEDGDKFVSPAQDALFKVHDRVIAEE----LRGDEDSDGGHQVTAK---- 143
A+ ++ P D L K+H + + G+ G +A+
Sbjct: 160 KQICVVMLEAYTIQGQYAIPQPD-LTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSH 218
Query: 144 -LLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
L +P+D IGC+IG+ G + IR +GAQI+I +D V I+G A+ +
Sbjct: 219 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVTITGSAASIS 273
Query: 203 KALCQIASRL 212
A I RL
Sbjct: 274 LAQYLINVRL 283
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/305 (23%), Positives = 128/305 (41%), Gaps = 94/305 (30%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKVDS----SSTEGDDCL--ITVSSKEFFEDTLSATIEA-------------VVRL 353
+GA ++V +STE + I S E + +EA + +L
Sbjct: 127 TGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLEAYTIQGQYAIPQPDLTKL 186
Query: 354 QPRCSEKIE-------------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
++ D+ + + L +P IGC+IG+ G+ I E+R+++
Sbjct: 187 HQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSG 246
Query: 401 ANIRI 405
A I+I
Sbjct: 247 AQIKI 251
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/183 (30%), Positives = 93/183 (50%), Gaps = 37/183 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER+VT+ +D
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPTD------- 69
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVI 155
A+FK + L+ +ED + VT +L++P+ Q G +I
Sbjct: 70 ----------AIFKAFSMI---ALKFEEDINASMTNSTVTSKPPVTLRLVIPASQCGSLI 116
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++
Sbjct: 117 GKGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLES 172
Query: 216 PSR 218
P +
Sbjct: 173 PPK 175
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + S IT
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFS 76
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED ++ + V +P T RL++P S+ G LIGKGGS I
Sbjct: 77 MIALKFEEDINASMTNSTVTSKP-------------PVTLRLVIPASQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 124 KEIRESTGAQVQVA-GDMLP---NSTERAVTISGT----PDAIIQCVKQICVVMLESPPK 175
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 176 GAT----IPYRP 183
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
++GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + SC R +
Sbjct: 9 TEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----SCPER---I 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + ++++NS +S V
Sbjct: 62 VTITGPTDAIFKAFSMIALKFEED-------INASMTNSTVTSKPPV------------- 101
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 102 ---------------------------------TLRLVIPASQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 STGAQVQV 136
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
+L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 286 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI 318
Score = 38.9 bits (89), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
P D S+ S L P IG +IG+ G+ IN+IRQ SGA IK+ +++TEG
Sbjct: 274 PGLDASTPASSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI-ANATEG 324
>gi|291394537|ref|XP_002713869.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Oryctolagus cuniculus]
Length = 517
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 185/418 (44%), Gaps = 63/418 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 131 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 190
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + +D+ ++ K+L ++ +G +IGK
Sbjct: 191 TSA----------ACKSILEIMHK-------EAQDTKFTEEIPLKILAHNNFVGRLIGKE 233
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 234 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 291
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I P + + L S + P
Sbjct: 292 DIASMNLQAHLI-----------------PGLNLNALGLFPPTPGMPPPTPGPPSAMAPP 334
Query: 276 RDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
L E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 335 YPPLEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV 392
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGG 389
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 393 -------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGG 445
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 446 KTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 499
>gi|441656325|ref|XP_004093124.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2
[Nomascus leucogenys]
Length = 500
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 70 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 129
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 130 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 186
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 187 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 243
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 244 LNISYANVAGPVANSNPTGSPYASPADVLP 273
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 20/189 (10%)
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS----- 323
S Y+ P + L E+ L+++ P G +IGKGG I Q+++E+GA IK+ S
Sbjct: 53 HSYYNTP-NLLEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG 111
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RL 374
T CL+ +++ + + + I VR P+ K E + L TT +L
Sbjct: 112 TTERVCLVQGTAEAL--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKL 169
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+VP S G +IGKGG+ + + + A +++ K P+ + + +V +SG+ + A
Sbjct: 170 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKA 226
Query: 435 LIQVMTRLR 443
+ ++ +++
Sbjct: 227 VSAIVQKVQ 235
>gi|195439130|ref|XP_002067484.1| GK16164 [Drosophila willistoni]
gi|194163569|gb|EDW78470.1| GK16164 [Drosophila willistoni]
Length = 587
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/416 (23%), Positives = 185/416 (44%), Gaps = 57/416 (13%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + +S
Sbjct: 121 HRKENV-GSLEKSITIYGNPENCTNAC-------------------KRILEVMQQEANST 160
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 161 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 218
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA----- 250
G + +A QI+++L + ++ L + S G +TP G+
Sbjct: 219 GLIENMSRAENQISTKLRQS---YENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNTSM 275
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
P G T + ++ +D+ + L P +G +IG G+ I I
Sbjct: 276 PFPSCQGFAMSKTPANVVPPVFP---NDMQETTY---LYIPNNAVGAIIGTKGSHIRSIM 329
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL--- 367
+ S A++K+ + + D L + ++ T+ T E + Q EK+ R+ G
Sbjct: 330 RFSNASLKI--APIDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEKM-REEGFMCG 383
Query: 368 ---ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
+ T LLV +S++G +IGKGG + E++R+T + I+ LP+ L + D+E
Sbjct: 384 TDDVRLTIELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPPSGGDEE 438
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 25/210 (11%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 302 QETTYLYI-PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPIDADKPLDQQTERKVTIVGT 360
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 361 PEGQ-------------WKAQYMIFEKMREEGFMCGTDDV----RLTIELLVASSQVGRI 403
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 404 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLS 463
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAA 243
NP +A SL G AA
Sbjct: 464 TNPPPVTKKQKAAKEQQLQQQQSLAGAGAA 493
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 144/340 (42%), Gaps = 72/340 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGD----------------TAGD--WSRSLYSAPRD-------DLSSKEFSLRLVCPVAN 294
+ D T G+ +S S+P D S++ S L P
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL 295
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 296 IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 335
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|410951299|ref|XP_003982335.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Felis catus]
Length = 403
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 139/299 (46%), Gaps = 35/299 (11%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ--- 220
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 221 ---HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA--P 275
L + S + S+ G A + L G S S+ P
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQ----QLSGHAVPFASPSMVPGLDP 237
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 238 GTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 126/315 (40%), Gaps = 86/315 (27%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRS----------------------LYSAPRDD 278
A T I I G GD + + L S P+
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGA 178
Query: 279 LSSKEFSLRL--VCPVANIG-GVIGKGGAI----INQIRQESGAAIKVDSSS-TEGDDCL 330
SL L V AN G V G+ GA+ + +++Q SG A+ S S G D
Sbjct: 179 TIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPG 238
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
SS+EF LVP IGC+IG+ GS
Sbjct: 239 TQTSSQEF------------------------------------LVPNDLIGCVIGRQGS 262
Query: 391 IITEMRRLTKANIRI 405
I+E+R+++ A+I+I
Sbjct: 263 KISEIRQMSGAHIKI 277
>gi|195042483|ref|XP_001991440.1| GH12054 [Drosophila grimshawi]
gi|193901198|gb|EDW00065.1| GH12054 [Drosophila grimshawi]
Length = 611
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 199/454 (43%), Gaps = 82/454 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSIRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y D TNA + I E ++ + S
Sbjct: 121 HRKENV-GSLEKSITIYGNPDNCTNAC-------------------KRILEVMQQEALST 160
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 161 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSYNL--ERIITVK 218
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 219 G---------------LIENMSRAENQISTKLRQSYENDLQAIAPQSLM-FPGLHPMAMM 262
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +D+ + L P +G +IG
Sbjct: 263 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPAFPNDMQETTY---LYIPNNAVGAIIG 319
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 320 TKGSHIRSIMRFSSASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 374
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 375 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 432
Query: 415 ASEDDEM-VQISGDLDLAKDALIQVMTRLRANLF 447
+ D+E V I G + A R+RA +
Sbjct: 433 SGGDEETPVHIIGQFYSVQSA----QRRIRAMML 462
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 302 QETTYLYI-PNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGT 360
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 361 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 403
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G+ V+ A +I A L
Sbjct: 404 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGQFYSVQSAQRRIRAMMLS 463
Query: 214 DNP 216
NP
Sbjct: 464 TNP 466
>gi|189237154|ref|XP_973939.2| PREDICTED: similar to igf2 mRNA binding protein, putative
[Tribolium castaneum]
Length = 1116
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 183/419 (43%), Gaps = 76/419 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVY-SASDET 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y + + T
Sbjct: 129 DFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPENCT 188
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG------HQVTAKLLVPSDQIGC 153
NA + R++ + +++ G +++ K+L ++ IG
Sbjct: 189 NACK------------------RILEVMQQEANNTNKGYAKKYYYEICLKILAHNNLIGR 230
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL- 212
+IGKGG ++ I ET +I + + S L + ++ + G + +A QI+++L
Sbjct: 231 IIGKGGNTIKRIMQETDTKITVSSINDINSFNL--ERIITVKGAIDNMSRAEAQISAKLR 288
Query: 213 --HDNPSRS---QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDW 267
++N ++ Q ++ + + + +G + G AP G Y GD
Sbjct: 289 QSYENDLQAMAPQTMMFPGLHPMAMMATAGIGYGSRGLYTGQAPYPGMYPAGAAQGGGDS 348
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV------DS 321
+ Y L P +G +IG G+ I I + SGA++K+
Sbjct: 349 QETTY---------------LYIPNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKP 393
Query: 322 SSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS------FTTRLL 375
T+ + + V S EA + Q EK+ R+ G ++ T ++
Sbjct: 394 QETQNERRVTIVGSP-----------EAQWKAQYLIFEKM-REEGFVAGSDDVRLTVEIM 441
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
VP+S++G +IGKGG + E++R+T + I++ + P+ ED+ V I G + A
Sbjct: 442 VPSSQVGRIIGKGGQNVRELQRVTGSVIKLPEQGASPQ---EDETTVHIIGPFFSVQSA 497
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 28/143 (19%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPG---SEERVVTVYS 94
++T Y Y+ P +G+IIG G ++ + + + ++I ET P +E RV V S
Sbjct: 349 QETTYLYI-PNNAVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGS 407
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIG 152
+ A +I E++R + G V T +++VPS Q+G
Sbjct: 408 PEAQWKA-------------------QYLIFEKMREEGFVAGSDDVRLTVEIMVPSSQVG 448
Query: 153 CVIGKGGQIVQNIRSETGAQIRI 175
+IGKGGQ V+ ++ TG+ I++
Sbjct: 449 RIIGKGGQNVRELQRVTGSVIKL 471
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 98/215 (45%), Gaps = 11/215 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFED 341
+F LR++ +G +IG+ G+ I QI Q++ A + V G + IT+ E+
Sbjct: 129 DFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNP--EN 186
Query: 342 TLSAT--IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
+A I V++ + + K ++L + IG +IGKGG+ I + + T
Sbjct: 187 CTNACKRILEVMQQEANNTNKGYAKKYYYEICLKILAHNNLIGRIIGKGGNTIKRIMQET 246
Query: 400 KANIRILPKENLPKIASEDDE-MVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
I + ++ I S + E ++ + G +D A Q+ +LR + + A++
Sbjct: 247 DTKITV---SSINDINSFNLERIITVKGAIDNMSRAEAQISAKLRQSYENDLQAMAPQTM 303
Query: 459 VLPYI-PVSENGSDGLNYESRDSKRHGRGPPYGGY 492
+ P + P++ + G+ Y SR G+ P G Y
Sbjct: 304 MFPGLHPMAMMATAGIGYGSR-GLYTGQAPYPGMY 337
>gi|406697218|gb|EKD00483.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 8904]
Length = 793
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 130/302 (43%), Gaps = 61/302 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L + IIGR G V ++R + +++ I E++PG+ ER++ V+ A D
Sbjct: 91 RALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGALD-------- 142
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
A F + R I +E G VT K ++P+ ++G VIG+GG ++ I
Sbjct: 143 ------AVSKAFGLIVRRINDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEI 196
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ +GA++ + LP ++ ++ +SG A + A+ I + L + R+
Sbjct: 197 QDASGARLN-ASEVMLPGS---TERILSVSGVADAIHIAVYYIGTILLEYQERN------ 246
Query: 226 AISNSHSSSGSL----VGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
HS G+ G AA P G+AP G G ++ ++
Sbjct: 247 --PGPHSGIGTYRQQPQGMAAAQPSFTGVAP-----GAGGASAPGSQTQQIF-------- 291
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST--------EGDDCLIT 332
P + +G +IGK G+ IN+IR +S I+V T D+ L+T
Sbjct: 292 ---------IPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPANPDERLVT 342
Query: 333 VS 334
++
Sbjct: 343 IT 344
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 21/198 (10%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSA 95
+ G +++ P ++GS+IGRGG +K+++ + +++ E +PGS ER+++V
Sbjct: 165 VPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGV 224
Query: 96 SDE---------TNAFEDGDKFVSPAQD-ALFKVHDRVIA---EELRGDEDSDGGHQV-- 140
+D T E ++ P ++ + +A G GG
Sbjct: 225 ADAIHIAVYYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAGGASAPG 284
Query: 141 --TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP---SCALRSDELVQIS 195
T ++ +P+ +G +IGK G + IR+++ QIR+ + P A + LV I+
Sbjct: 285 SQTQQIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPANPDERLVTIT 344
Query: 196 GEASVVKKALCQIASRLH 213
G+ + A+ + RL
Sbjct: 345 GQPVNINIAVQMLYHRLE 362
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
+++ S+R + + +IG+ GA +N+IR++SGA + + S + ++ V
Sbjct: 85 AQQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGA---L 141
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
D +S +VR + G + T + ++P SR+G +IG+GGS I E++
Sbjct: 142 DAVSKAFGLIVRRINDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQ 197
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 84/196 (42%), Gaps = 32/196 (16%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKE-- 337
S+ +++ + P + +G VIG+GG+ I +I+ SGA + G + +++VS
Sbjct: 168 SRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGVADA 227
Query: 338 -----FFEDTLSATIE----------AVVRLQPRCSEKIERD-----------SGLISFT 371
++ T+ + R QP+ + S S T
Sbjct: 228 IHIAVYYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAGGASAPGSQT 287
Query: 372 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP---KIASEDDEMVQISGDL 428
++ +P S +G +IGK GS I E+R ++ IR+ P + A+ D+ +V I+G
Sbjct: 288 QQIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPANPDERLVTITGQP 347
Query: 429 DLAKDALIQVMTRLRA 444
A+ + RL A
Sbjct: 348 VNINIAVQMLYHRLEA 363
>gi|390479167|ref|XP_002762342.2| PREDICTED: RNA-binding protein Nova-2-like [Callithrix jacchus]
Length = 608
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 133 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 192
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 193 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 249
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 250 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 306
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 307 LNISYANVAGPVANSNPTGSPYASPADVLP 336
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 94/189 (49%), Gaps = 20/189 (10%)
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS----- 323
S Y+ P + L E+ L+++ P G +IGKGG I Q+++E+GA IK+ S
Sbjct: 116 HSYYNTP-NLLEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG 174
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RL 374
T CL+ +++ + + + I VR P+ K E + L TT +L
Sbjct: 175 TTERVCLVQGTAEAL--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKL 232
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+VP S G +IGKGG+ + + + A +++ K P+ + + +V +SG+ + A
Sbjct: 233 IVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKA 289
Query: 435 LIQVMTRLR 443
+ ++ +++
Sbjct: 290 VSAIVQKVQ 298
>gi|14670369|ref|NP_127501.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|14670373|ref|NP_127503.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|291575148|ref|NP_001167571.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|114587184|ref|XP_001170982.1| PREDICTED: poly(rC)-binding protein 4 isoform 12 [Pan troglodytes]
gi|114587188|ref|XP_001171026.1| PREDICTED: poly(rC)-binding protein 4 isoform 14 [Pan troglodytes]
gi|410037040|ref|XP_003950173.1| PREDICTED: poly(rC)-binding protein 4 [Pan troglodytes]
gi|12230429|sp|P57723.1|PCBP4_HUMAN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957167|gb|AAG09241.1|AF176330_1 alphaCP-4 [Homo sapiens]
gi|10436225|dbj|BAB14761.1| unnamed protein product [Homo sapiens]
gi|12804299|gb|AAH03008.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|13278756|gb|AAH04153.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|119585571|gb|EAW65167.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585572|gb|EAW65168.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585573|gb|EAW65169.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585576|gb|EAW65172.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585577|gb|EAW65173.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|261861404|dbj|BAI47224.1| poly(rC) binding protein 4 [synthetic construct]
gi|410227440|gb|JAA10939.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227442|gb|JAA10940.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227444|gb|JAA10941.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262892|gb|JAA19412.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262894|gb|JAA19413.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262896|gb|JAA19414.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301312|gb|JAA29256.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301314|gb|JAA29257.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350315|gb|JAA41761.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350319|gb|JAA41763.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350321|gb|JAA41764.1| poly(rC) binding protein 4 [Pan troglodytes]
Length = 403
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 43/288 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH-- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 222 ----------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
LL++ S V P T + ++ P+ D
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLD----- 236
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 237 ---PGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPR 356
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQL 219
Query: 357 CSEKIE---------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|401880798|gb|EJT45110.1| telomere length regulating RNA binding protein, Pbp2p [Trichosporon
asahii var. asahii CBS 2479]
Length = 793
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 130/302 (43%), Gaps = 61/302 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L + IIGR G V ++R + +++ I E++PG+ ER++ V+ A D
Sbjct: 91 RALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGALD-------- 142
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
A F + R I +E G VT K ++P+ ++G VIG+GG ++ I
Sbjct: 143 ------AVSKAFGLIVRRINDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEI 196
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ +GA++ + LP ++ ++ +SG A + A+ I + L + R+
Sbjct: 197 QDASGARLNA-SEVMLPGS---TERILSVSGVADAIHIAVYYIGTILLEYQERN------ 246
Query: 226 AISNSHSSSGSL----VGPTAATP-IVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
HS G+ G AA P G+AP G G ++ ++
Sbjct: 247 --PGPHSGIGTYRQQPQGMAAAQPSFTGVAP-----GAGGASAPGSQTQQIF-------- 291
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST--------EGDDCLIT 332
P + +G +IGK G+ IN+IR +S I+V T D+ L+T
Sbjct: 292 ---------IPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPVNPDERLVT 342
Query: 333 VS 334
++
Sbjct: 343 IT 344
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 89/189 (47%), Gaps = 21/189 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASDE------ 98
+++ P ++GS+IGRGG +K+++ + +++ E +PGS ER+++V +D
Sbjct: 174 KFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGVADAIHIAVY 233
Query: 99 ---TNAFEDGDKFVSPAQD-ALFKVHDRVIA---EELRGDEDSDGGHQV----TAKLLVP 147
T E ++ P ++ + +A G GG T ++ +P
Sbjct: 234 YIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAGGASAPGSQTQQIFIP 293
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSC--ALRSDE-LVQISGEASVVKKA 204
+ +G +IGK G + IR+++ QIR+ + P + DE LV I+G+ + A
Sbjct: 294 NSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPVNPDERLVTITGQPVNINIA 353
Query: 205 LCQIASRLH 213
+ + RL
Sbjct: 354 VQMLYHRLE 362
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 60/116 (51%), Gaps = 3/116 (2%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
+++ S+R + + +IG+ GA +N+IR++SGA + + S + ++ V
Sbjct: 85 AQQISMRALIVTQDASVIIGRAGAHVNEIREKSGARVTISESIPGNPERILNVFGA---L 141
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
D +S +VR + G + T + ++P SR+G +IG+GGS I E++
Sbjct: 142 DAVSKAFGLIVRRINDEPFDVASVPGSRAVTIKFIIPNSRMGSVIGRGGSKIKEIQ 197
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 83/196 (42%), Gaps = 32/196 (16%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKE-- 337
S+ +++ + P + +G VIG+GG+ I +I+ SGA + G + +++VS
Sbjct: 168 SRAVTIKFIIPNSRMGSVIGRGGSKIKEIQDASGARLNASEVMLPGSTERILSVSGVADA 227
Query: 338 -----FFEDTLSATIE----------AVVRLQPRCSEKIERD-----------SGLISFT 371
++ T+ + R QP+ + S S T
Sbjct: 228 IHIAVYYIGTILLEYQERNPGPHSGIGTYRQQPQGMAAAQPSFTGVAPGAGGASAPGSQT 287
Query: 372 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLP---KIASEDDEMVQISGDL 428
++ +P S +G +IGK GS I E+R ++ IR+ P + + D+ +V I+G
Sbjct: 288 QQIFIPNSLVGAIIGKAGSKINEIRAQSQCQIRVTEPGTAPGPGQPVNPDERLVTITGQP 347
Query: 429 DLAKDALIQVMTRLRA 444
A+ + RL A
Sbjct: 348 VNINIAVQMLYHRLEA 363
>gi|426243970|ref|XP_004015811.1| PREDICTED: RNA-binding protein Nova-2 [Ovis aries]
Length = 255
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 101/212 (47%), Gaps = 16/212 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 17 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 76
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 77 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 133
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 134 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 190
Query: 222 L------LASAISNSHSSSGSLVGPTAATPIV 247
L +A ++NS+ + P P V
Sbjct: 191 LNISYANVAGPVANSNPTGSPYASPADVLPAV 222
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 13 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 72
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 73 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 130
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 131 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 182
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 94/228 (41%), Gaps = 53/228 (23%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
EL G +G + + K+L+PS G +IGKGGQ + ++ ETGA I++ K +
Sbjct: 3 ELPGSSAEEGEYFL--KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTT 60
Query: 187 RSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPI 246
LVQ G A + IA ++ + P Q + + N
Sbjct: 61 ERVCLVQ--GTAEALNAVHSFIAEKVREIP---QAMTKPEVVN----------------- 98
Query: 247 VGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAII 306
++ P D A +L+ P + G +IGKGGA +
Sbjct: 99 -----ILQPQTTMNPDRAKQ-------------------AKLIVPNSTAGLIIGKGGATV 134
Query: 307 NQIRQESGAAIKVDSSSTEGDDC---LITVSSK-EFFEDTLSATIEAV 350
+ ++SGA +++ S EG + ++TVS + E +SA ++ V
Sbjct: 135 KAVMEQSGAWVQL-SQKPEGINLQERVVTVSGEPEQVHKAVSAIVQKV 181
>gi|148691147|gb|EDL23094.1| neuro-oncological ventral antigen 2 [Mus musculus]
Length = 411
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 7 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 66
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 67 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 123
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 124 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 180
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 181 LNISYANVAGPVANSNPTGSPYASPADVLP 210
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 3 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 62
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 63 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 120
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 121 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 172
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 37/183 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I E GS ER+VT+ +D
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPTD------- 69
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVI 155
A+FK + L+ +ED + VT +L+VP+ Q G +I
Sbjct: 70 ----------AIFKAFSMI---ALKFEEDINASMTNSTVTSKPPVTLRLVVPASQCGSLI 116
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++
Sbjct: 117 GKGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLES 172
Query: 216 PSR 218
P +
Sbjct: 173 PPK 175
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 36/197 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + S IT
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGSCPERIVTITGPTDAIFKAFS 76
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED ++ + V +P T RL+VP S+ G LIGKGGS I
Sbjct: 77 MIALKFEEDINASMTNSTVTSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 124 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 175
Query: 453 VSTFVPVLPYIPVSENG 469
+T +PY P +G
Sbjct: 176 GAT----IPYRPKPASG 188
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 82/187 (43%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + SC R +V
Sbjct: 10 EGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----SCPER---IV 62
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
I+G + KA IA + ++ + ++++NS +S V
Sbjct: 63 TITGPTDAIFKAFSMIALKFEED-------INASMTNSTVTSKPPV-------------- 101
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 102 --------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRES 129
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 130 TGAQVQV 136
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 74/292 (25%), Positives = 123/292 (42%), Gaps = 70/292 (23%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDETNAFE 103
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+
Sbjct: 103 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTI----------- 151
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI-V 162
S DA+ + ++ L E G + + P G +I GGQ+
Sbjct: 152 ------SGTPDAIIQCVKQICVVML---ESPPKGATIPYR---PKPASGPIIFAGGQVRA 199
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR---- 218
+ I + G + + + P+ A I G+ ++ + S H N +
Sbjct: 200 ETILASAGNHTVLAQPQPAPAFA--------IQGQYAIPHPDV----SSAHANYTLLFLF 247
Query: 219 ---SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
QHLL S ++ H + + T TP+ G T + P
Sbjct: 248 ICFGQHLL-STLTKLHQLA---MQHTPFTPL--------------GQTTPGF-------P 282
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
D +S S L P IG +IG+ G+ IN+IRQ SGA IK+ ++S EG+
Sbjct: 283 GLDATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANAS-EGN 333
>gi|386780909|ref|NP_001247796.1| poly(rC)-binding protein 4 [Macaca mulatta]
gi|332216103|ref|XP_003257183.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|332216105|ref|XP_003257184.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|332216107|ref|XP_003257185.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|402859923|ref|XP_003894386.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Papio anubis]
gi|402859925|ref|XP_003894387.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Papio anubis]
gi|402859927|ref|XP_003894388.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Papio anubis]
gi|403291118|ref|XP_003936646.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403291120|ref|XP_003936647.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
gi|355559585|gb|EHH16313.1| hypothetical protein EGK_11579 [Macaca mulatta]
gi|355746662|gb|EHH51276.1| hypothetical protein EGM_10621 [Macaca fascicularis]
gi|380788331|gb|AFE66041.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|380788333|gb|AFE66042.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|383414707|gb|AFH30567.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|384943104|gb|AFI35157.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
Length = 403
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 43/303 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH-- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 222 ----------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
LL++ S V P T + ++ P+ D
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLD----- 236
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +
Sbjct: 237 ---PGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 332 TVS 334
T++
Sbjct: 290 TIT 292
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPR 356
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQL 219
Query: 357 CSEKIE---------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|148226749|ref|NP_001081752.1| insulin-like growth factor 2 mRNA-binding protein 3-A [Xenopus
laevis]
gi|82227951|sp|O73932.1|IF23A_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-A; Short=IGF2 mRNA-binding protein 3-A; Short=IMP-3-A;
AltName: Full=69 kDa RNA-binding protein A; AltName:
Full=IGF-II mRNA-binding protein 3-A; AltName: Full=KH
domain-containing transcription factor B3-A; AltName:
Full=RNA-binding protein Vera-A; AltName:
Full=Trans-acting factor B3-A; AltName: Full=VICKZ
family member 3-A; AltName: Full=VLE-binding protein A;
AltName: Full=Vg1 RNA-binding protein A; Short=Vg1
RBP-A; AltName: Full=Vg1 localization element binding
protein A; AltName: Full=VgLE-binding and ER association
protein A
gi|3136158|gb|AAC41285.1| RNA binding protein Vera [Xenopus laevis]
gi|3172449|gb|AAC18598.1| Vg1 RNA binding protein variant D [Xenopus laevis]
gi|213623978|gb|AAI70477.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213623980|gb|AAI70479.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213625273|gb|AAI70224.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213626044|gb|AAI70196.1| Vg1 RNA binding protein Vera [Xenopus laevis]
Length = 594
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 177/396 (44%), Gaps = 61/396 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +A
Sbjct: 209 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCSA--- 265
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++I E ++ + +D+ ++ K+L ++ +G +IGK G+ ++
Sbjct: 266 ---------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 310
Query: 164 NIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSR 218
I +T +I I L+D L + + + G KA +I ++ ++N
Sbjct: 311 KIEQDTDTKITISPLQDLTL----YNPERTITVKGSIEPCAKAEEEIMKKIRESYENDIA 366
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
+ +L A I + ++ +G+ P + S P
Sbjct: 367 AMNLQAHLIPGLNLNA------------LGLFPSSSSGMPPPSVGVPSPTSSTSYPPFGQ 414
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
E ++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 415 QPESE-TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV---- 467
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP+ G +IGKGG +
Sbjct: 468 ---IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVN 524
Query: 394 EMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
E++ LT A + ++P++ P E+DE +V+I+G
Sbjct: 525 ELQNLTSAEV-VVPRDQTP---DENDEVVVKITGHF 556
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
E LR++ P +G +IGK GA I I +++ + I + G + IT+ S +
Sbjct: 205 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST---PE 261
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFT----TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + ++ + +++++ FT ++L + +G LIGK G + ++ +
Sbjct: 262 GCSAACKIIMEI-------MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 314
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
T I I P ++L + + + G ++ A ++M ++R + + A++
Sbjct: 315 DTDTKITISPLQDL--TLYNPERTITVKGSIEPCAKAEEEIMKKIRESYENDIAAMNLQA 372
Query: 458 PVLP 461
++P
Sbjct: 373 HLIP 376
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 25/145 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 416 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPP-- 473
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKL----LVPSDQIGCV 154
+A FK R+ + E++ G + KL VPS G V
Sbjct: 474 ---------------EAQFKAQGRIYG---KLKEENFFGPKEEVKLETHIKVPSYAAGRV 515
Query: 155 IGKGGQIVQNIRSETGAQIRILKDE 179
IGKGG+ V +++ T A++ + +D+
Sbjct: 516 IGKGGKTVNELQNLTSAEVVVPRDQ 540
>gi|392344006|ref|XP_002728759.2| PREDICTED: RNA-binding protein Nova-2 [Rattus norvegicus]
Length = 576
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 120 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNA- 178
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 179 --AHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 236
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 237 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 293
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 294 LNISYANVAGPVANSNPTGSPYASPADVLP 323
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 87/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 116 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 175
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 176 L--NAAHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 233
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 234 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 285
>gi|296225349|ref|XP_002758447.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Callithrix
jacchus]
gi|296225353|ref|XP_002758449.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Callithrix
jacchus]
gi|297671175|ref|XP_002813714.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pongo abelii]
gi|297671177|ref|XP_002813715.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Pongo abelii]
gi|395733705|ref|XP_003776278.1| PREDICTED: poly(rC)-binding protein 4 [Pongo abelii]
Length = 403
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 43/288 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH-- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 222 ----------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
LL++ S V P T + ++ P+ D
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLD----- 236
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 237 ---PGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPR 356
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQL 219
Query: 357 CSEKIE---------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|405122865|gb|AFR97631.1| cytoplasmic protein [Cryptococcus neoformans var. grubii H99]
Length = 357
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 66/337 (19%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP+ R L + IIGRGG V ++R + +++ + E++PG+ ER++ V D
Sbjct: 76 GPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLD- 134
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A F + R I +E G VT K ++P+ ++G VIGKG
Sbjct: 135 -------------AVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKG 181
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ I+ +GA++ + LP R ++ +SG A V A+ I + L + R
Sbjct: 182 GSKIKEIQEASGARLN-ASEAMLPGSTER---VLSVSGVADAVHIAVYYIGTILLEYQDR 237
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
P AT G YK SR +
Sbjct: 238 Y--------------------PANAT------------GSYK----QSQSRGPPANSNAP 261
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST--------EGDDCL 330
+ ++ P A +G +IG+GG+ IN+IR +S I+V T ++ L
Sbjct: 262 PPPGMQTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERL 321
Query: 331 ITVSSKEFFEDTLSATIEAVV-RLQPRCSEKIERDSG 366
+T++ + D ++A + + R++ ++ +E+++G
Sbjct: 322 VTITG---YPDNINAAVALLYSRVEAERAKLVEQNAG 355
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ D ++ S+R + + +IG+GGA +N+IR++S A + V S + ++ VS
Sbjct: 72 KPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSG 131
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
D ++ +VR + G + T + ++P SR+G +IGKGGS I E+
Sbjct: 132 P---LDAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKEI 188
Query: 396 RRLTKANI 403
+ + A +
Sbjct: 189 QEASGARL 196
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 21/185 (11%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKE-- 337
S+ +++ + P + +G VIGKGG+ I +I++ SGA + + G + +++VS
Sbjct: 160 SRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVADA 219
Query: 338 -----FFEDTLSATIEAVVRLQPRCSEKIERDSGLISF----------TTRLLVPTSRIG 382
++ T+ + S K + G + T ++ +P + +G
Sbjct: 220 VHIAVYYIGTILLEYQDRYPANATGSYKQSQSRGPPANSNAPPPPGMQTQQIFIPNALVG 279
Query: 383 CLIGKGGSIITEMRRLTKANIRIL-PKENLP--KIASEDDEMVQISGDLDLAKDALIQVM 439
+IG+GGS I E+R + IR+ P +P A+ ++ +V I+G D A+ +
Sbjct: 280 AIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDNINAAVALLY 339
Query: 440 TRLRA 444
+R+ A
Sbjct: 340 SRVEA 344
>gi|149641305|ref|XP_001512362.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ornithorhynchus anatinus]
Length = 584
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 182/403 (45%), Gaps = 67/403 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +
Sbjct: 196 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS 255
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 256 ------------------TACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEG 297
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 298 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRESYE 353
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATP---IVGIAPLMGPYGGYKGDTAGDWSRSL 271
N + +L A I + ++ L P+++ VG+A + +
Sbjct: 354 NDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPTVGVAS----------------AAAA 397
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
S P + ++ L P +G +IGK G I Q+ + +GA+IK+ + EG D +
Sbjct: 398 TSYPPFGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKL 455
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIG 386
V ++ EA + Q R K++ ++ + + VP+ G +IG
Sbjct: 456 RVV-------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIG 508
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
KGG + E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 509 KGGKTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 547
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 78/180 (43%), Gaps = 39/180 (21%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ RVV + +
Sbjct: 407 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRVVIITGPPE- 465
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIGCVI 155
A FK R+ + +E+ G + + A + VPS G VI
Sbjct: 466 ----------------AQFKAQGRIYGK--LKEENFFGPKEEVKLEAHIKVPSYAAGRVI 507
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE----LVQISGEASVVKKALCQIASR 211
GKGG+ V +++ T A++ + +D+ DE +V+I+G CQ+A R
Sbjct: 508 GKGGKTVNELQNLTSAEVVVPRDQ-------TPDENDQVVVKITGHFYA-----CQLAQR 555
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 140/341 (41%), Gaps = 74/341 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-- 257
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 258 ------------------------GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVA 293
G+ G + Y A D S++ S L P
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDA-SAQTTSHELTIPND 294
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 295 LIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 335
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 333
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 334 ITGSAASISLAQYLINVRL 352
>gi|225000564|gb|AAI72604.1| Neuro-oncological ventral antigen 2 [synthetic construct]
Length = 583
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 127 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 186
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 187 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 243
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 244 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 300
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 301 LNISYANVAGPVANSNPTGSPYASPADVLP 330
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 87/174 (50%), Gaps = 19/174 (10%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEF 338
+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 124 YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL 183
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKGG 389
+ + + I VR P+ K E + L TT +L+VP S G +IGKGG
Sbjct: 184 --NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGG 241
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 242 ATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 292
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 51/212 (24%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
K+L+PS G +IGKGGQ + ++ ETGA I++ K + LVQ G A +
Sbjct: 127 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ--GTAEALN 184
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
IA ++ + P Q + + N ++ P D
Sbjct: 185 AVHSFIAEKVREIP---QAMTKPEVVN----------------------ILQPQTTMNPD 219
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
A +L+ P + G +IGKGGA + + ++SGA +++ S
Sbjct: 220 RAKQA-------------------KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL-SQ 259
Query: 323 STEGDDC---LITVSSK-EFFEDTLSATIEAV 350
EG + ++TVS + E +SA ++ V
Sbjct: 260 KPEGINLQERVVTVSGEPEQVHKAVSAIVQKV 291
>gi|73985377|ref|XP_849987.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Canis lupus
familiaris]
gi|301767222|ref|XP_002919000.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 403
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 139/299 (46%), Gaps = 35/299 (11%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ--- 220
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 221 ---HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA--P 275
L + S + S+ G A + L G S S+ P
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQ----QLSGHAVPFASPSMVPGLDP 237
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 238 GAQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 292
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 126/315 (40%), Gaps = 86/315 (27%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRS----------------------LYSAPRDD 278
A T I I G GD + + L S P+
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGA 178
Query: 279 LSSKEFSLRL--VCPVANIG-GVIGKGGAI----INQIRQESGAAIKVDSSS-TEGDDCL 330
SL L V AN G V G+ GA+ + +++Q SG A+ S S G D
Sbjct: 179 TIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVPGLDPG 238
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
SS+EF LVP IGC+IG+ GS
Sbjct: 239 AQTSSQEF------------------------------------LVPNDLIGCVIGRQGS 262
Query: 391 IITEMRRLTKANIRI 405
I+E+R+++ A+I+I
Sbjct: 263 KISEIRQMSGAHIKI 277
>gi|149728835|ref|XP_001494599.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Equus
caballus]
Length = 403
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 132/284 (46%), Gaps = 35/284 (12%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPTNGGSVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ--- 220
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 221 ---HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA--P 275
L + S + S+ G A + L G S S+ P
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQGQYGAVTSAEVTKLQ----QLSGHAVPFASPSMVPGLDP 237
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 238 GAQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPTNGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 50/297 (16%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N S S V P
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPTNGGSVSRPPVTLRLVIPASQCG 114
Query: 251 PLMGPYG----------GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
L+G G G + AGD + S R S ++C V I VI
Sbjct: 115 SLIGKAGTKIKEIRETTGAQVQVAGDLLPN--STERAVTVSGVPDAIILC-VRQICAVIL 171
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQ--- 354
+ GA I S + G + +S+ + F + T V +LQ
Sbjct: 172 E--------SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTSAEVTKLQQLS 220
Query: 355 ----PRCSEKIER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
P S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 221 GHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|148229563|ref|NP_001079932.1| insulin-like growth factor 2 mRNA-binding protein 3-B [Xenopus
laevis]
gi|82227771|sp|O57526.1|IF23B_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-B; Short=IGF2 mRNA-binding protein 3-B; Short=IMP-3-B;
AltName: Full=69 kDa RNA-binding protein B; AltName:
Full=B3.65 protein B; AltName: Full=IGF-II mRNA-binding
protein 3-B; AltName: Full=KH domain-containing
transcription factor B3-B; AltName: Full=RNA-binding
protein Vera-B; AltName: Full=Trans-acting factor B3-B;
AltName: Full=VICKZ family member 3-B; AltName:
Full=VLE-binding protein B; AltName: Full=Vg1
RNA-binding protein B; Short=Vg1 RBP-B; AltName:
Full=Vg1 localization element binding protein B;
AltName: Full=VgLE-binding and ER association protein B
gi|2801766|gb|AAB97457.1| KH domain-containing transcription factor B3 [Xenopus laevis]
gi|3172447|gb|AAC18597.1| Vg1 RNA binding protein variant A [Xenopus laevis]
gi|35505483|gb|AAH57700.1| MGC68429 protein [Xenopus laevis]
Length = 593
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 178/396 (44%), Gaps = 61/396 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +A
Sbjct: 208 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCSA--- 264
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++I E ++ + +D+ ++ K+L ++ +G +IGK G+ ++
Sbjct: 265 ---------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 309
Query: 164 NIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSR 218
I +T +I I L+D L + + + G KA ++ ++ ++N
Sbjct: 310 KIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEVMKKIRESYENDIA 365
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
+ +L A I + ++ L P+++ A + P G S
Sbjct: 366 AMNLQAHLIPGLNLNALGLFPPSSSGMPPPSAGVSSPTTSASYPPFGQQPESE------- 418
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 419 ------TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV---- 466
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + + VP+ G +IGKGG +
Sbjct: 467 ---IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVN 523
Query: 394 EMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 524 ELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 555
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
E LR++ P +G +IGK GA I I +++ + I + G + IT+ S +
Sbjct: 204 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST---PE 260
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFT----TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + ++ + +++++ FT ++L + +G LIGK G + ++ +
Sbjct: 261 GCSAACKIIMEI-------MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 313
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
T I I P ++L + + + G ++ A +VM ++R + + A++
Sbjct: 314 DTDTKITISPLQDL--TLYNPERTITVKGSIETCAKAEEEVMKKIRESYENDIAAMNLQA 371
Query: 458 PVLP 461
++P
Sbjct: 372 HLIP 375
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 23/144 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 415 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPE- 473
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIGCVI 155
A FK R+ + +E+ G + + A + VPS G VI
Sbjct: 474 ----------------AQFKAQGRIYGK--LKEENFFGPKEEVKLEAHIKVPSYAAGRVI 515
Query: 156 GKGGQIVQNIRSETGAQIRILKDE 179
GKGG+ V +++ T A++ + +D+
Sbjct: 516 GKGGKTVNELQNLTSAEVVVPRDQ 539
>gi|196001809|ref|XP_002110772.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
gi|190586723|gb|EDV26776.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
Length = 560
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 177/388 (45%), Gaps = 58/388 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG--ETVPGSEERVVTVYSASDE-TNAF 102
R L P +G+IIGR G ++ + T++++ + E++ GS E+ +T+ D T+A
Sbjct: 141 RILVPTEMVGAIIGREGNTIRSITQQTQARVDVHRRESL-GSAEKAITILGTPDSCTSAA 199
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH---QVTAKLLVPSDQIGCVIGKGG 159
K + Q L + ++ +L+ ++ GH + K+L ++ IG +IGK G
Sbjct: 200 LQIAKIM---QSELLSTNPQL---KLKVEQ----GHPIPNIPLKILAHNNLIGRLIGKNG 249
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN---- 215
++++I ++T ++I I K E L S S+ + + G +A ++++L
Sbjct: 250 NVIKSIMNQTNSKITISKLEDLKSGY--SERTITVIGTVENSSRAEALLSAKLRSYYKQD 307
Query: 216 -----PSRS------------QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG 258
P R + L+++ ++S S SGSL+ A I+PL P
Sbjct: 308 MASMIPQRQGQSSANSNSNGSSYPLSNSTTSSVSDSGSLIDSAA------ISPLSIP--- 358
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
+G +S + D++ S E + + P+ VIG G + + Q SGA++
Sbjct: 359 --NSPSGLFSNNSVFLENDNVQSDEIETTAIYIPIQTFNYVIGARGNQLPALEQISGASL 416
Query: 318 KVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVP 377
++ S G + K S+ +A + + + E + L S T +LVP
Sbjct: 417 QLVQSMYSGAN-----ERKVVVNGNASSQWKAQLSIFNKVGEGLTPSEEL-SLRTEILVP 470
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ +G +IGKGGS + +++ T A I I
Sbjct: 471 SPLVGRIIGKGGSTVRQLQSQTGAMIEI 498
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 65/137 (47%), Gaps = 10/137 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFED 341
EF LR++ P +G +IG+ G I I Q++ A + V + G + IT+ +
Sbjct: 137 EFPLRILVPTEMVGAIIGREGNTIRSITQQTQARVDVHRRESLGSAEKAITILGTP--DS 194
Query: 342 TLSATIEAVVRLQ-------PRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
SA ++ +Q P+ K+E+ + + ++L + IG LIGK G++I
Sbjct: 195 CTSAALQIAKIMQSELLSTNPQLKLKVEQGHPIPNIPLKILAHNNLIGRLIGKNGNVIKS 254
Query: 395 MRRLTKANIRILPKENL 411
+ T + I I E+L
Sbjct: 255 IMNQTNSKITISKLEDL 271
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Query: 261 GDTAGDW--SRSLYSAPRDDLS-SKEFSLR--LVCPVANIGGVIGKGGAIINQIRQESGA 315
G+ + W S+++ + L+ S+E SLR ++ P +G +IGKGG+ + Q++ ++GA
Sbjct: 435 GNASSQWKAQLSIFNKVGEGLTPSEELSLRTEILVPSPLVGRIIGKGGSTVRQLQSQTGA 494
Query: 316 AIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
I++ +GD + + I +++R
Sbjct: 495 MIEIPRGMADGDKVSVHIKGTFLASQAAQRRIRSIIR 531
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 351 VRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
+R+ PR + R F R+LVPT +G +IG+ G+ I + + T+A + + +E+
Sbjct: 122 IRMSPR---NLTRTPSHCEFPLRILVPTEMVGAIIGREGNTIRSITQQTQARVDVHRRES 178
Query: 411 LPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
L ++ + I G D A +Q+ +++ L
Sbjct: 179 L----GSAEKAITILGTPDSCTSAALQIAKIMQSELL 211
>gi|345785612|ref|XP_855043.2| PREDICTED: RNA-binding protein Nova-2 [Canis lupus familiaris]
Length = 597
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 141 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 200
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 201 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 257
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 258 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 314
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 315 LNISYANVAGPVANSNPTGSPYASPADVLP 344
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 137 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 196
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 197 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 254
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 255 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 306
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087 protein [Zea mays]
Length = 344
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 148/343 (43%), Gaps = 41/343 (11%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSE 86
GDD+++ T R+L G IIG+GG + + + ++I++ E PG+
Sbjct: 34 GDDKEK------PTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTN 87
Query: 87 ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+R++ V DE A+ + ++++AE G+E ++ + +L+V
Sbjct: 88 DRIIMVSGLFDEV-------------MKAMELILEKLLAE---GEEFNEAEARPKVRLVV 131
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG----EASVVK 202
P+ G +IGKGG +++ E+ A I+I ++ + D LV I+G + + +
Sbjct: 132 PNSSCGGIIGKGGATIKSFIEESHAGIKISPQDN--NYVGLHDRLVTITGTFDNQMNAID 189
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
L +++ +H P+ S + ++ S G VG A GP GY
Sbjct: 190 LILKKLSEDVHYPPNLSSPFPYAGLTFP-SYPGVPVGYMIPQVPYSNAVNYGPNNGY--- 245
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVD 320
G + + + P +S E L +A+ IG V+G+ G I +I Q SGA IK+
Sbjct: 246 -GGRYQNNKPTTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKI- 303
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
S GD T K T A A + R S ER
Sbjct: 304 --SDRGDYISGTSDRKVTITGTPEAIRTAESMIMQRVSASSER 344
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE---GDDCLITVS 334
D K LR + G +IGKGG+ IN + +SGA I++ S+ +D +I VS
Sbjct: 35 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVS 94
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
F++ + A +E + L+ +E E + RL+VP S G +IGKGG+ I
Sbjct: 95 G--LFDEVMKA-MELI--LEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKS 149
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVS 454
+ A I+I P++N D +V I+G D +A+ ++ +L ++ S
Sbjct: 150 FIEESHAGIKISPQDN--NYVGLHDRLVTITGTFDNQMNAIDLILKKLSEDVHYPPNLSS 207
Query: 455 TF------VPVLPYIPV 465
F P P +PV
Sbjct: 208 PFPYAGLTFPSYPGVPV 224
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSD 189
+E D + LV + GC+IGKGG + + +S++GA+I++ + +E P +D
Sbjct: 32 EEGDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGT---ND 88
Query: 190 ELVQISGEASVVKKALCQIASRL 212
++ +SG V KA+ I +L
Sbjct: 89 RIIMVSGLFDEVMKAMELILEKL 111
>gi|395832731|ref|XP_003789409.1| PREDICTED: poly(rC)-binding protein 4 [Otolemur garnettii]
Length = 403
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 139/303 (45%), Gaps = 43/303 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH-- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 222 ----------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
LL++ S V P T + ++ P+ D
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGLD----- 236
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +
Sbjct: 237 ---PGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 332 TVS 334
T++
Sbjct: 290 TIT 292
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQ-- 354
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQL 219
Query: 355 -----PRCSEKIER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
P S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SGHAVPFASPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|332215035|ref|XP_003256642.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Nomascus leucogenys]
Length = 577
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 94/391 (24%), Positives = 177/391 (45%), Gaps = 58/391 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 194 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 253
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 254 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 295
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 296 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 353
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+ + A+ I + S+ + G++ L P G A + Y P
Sbjct: 354 MLAVNQQANLIPGLNLSALGIFS-------TGLSVLSPPAGPRGAPPAAPYHPFAY--PE 404
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 405 QEI------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSER 452
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + + VP+S G +IGKGG
Sbjct: 453 MVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKT 509
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + I+P++ P E++E++
Sbjct: 510 VNELQNLTSAEV-IVPRDQTP---DENEEVI 536
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 403 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 461
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 462 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 506
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 507 GKTVNELQNLTSAEVIVPRDQ 527
>gi|4235140|gb|AAD13116.1| RNA-binding protein Nova-2 [AA 29-492] [Homo sapiens]
Length = 464
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 8 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 67
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 68 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 124
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 125 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 181
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 182 LNISYANVAGPVANSNPTGSPYASPADVLP 211
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 4 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 63
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 64 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 121
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 122 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 173
>gi|313240346|emb|CBY32688.1| unnamed protein product [Oikopleura dioica]
Length = 568
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 167/374 (44%), Gaps = 44/374 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSA 95
G DT + L P +G+IIG+GG V+Q+ S+ R+ PGS+ +V T+Y A
Sbjct: 190 GSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSD-KVATIYGA 248
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ A A ++ + V EE +++ K+L + IG +I
Sbjct: 249 PEACGA-------------AAIRILEIVRKEE--------KDNELPLKVLAHNALIGRLI 287
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G+ G+ +++++ +TG +I I L + D + I GE + +A QI +L
Sbjct: 288 GRDGRNLKHVQDKTGTRIAISSMHELSPYNM--DRTISIHGEVKGISEAEQQITEKLRQF 345
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
+ + ++ +S + P +P A + G Y + S+S++ +
Sbjct: 346 ETDMAAMSQQSLYPGLNSQQMQMFPGLQSPTAPPAYNVSYQGSY---FFKNVSQSVFFSG 402
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ + ++ L+ P +G +IG G I I + +GA+I++ ++ +T+
Sbjct: 403 NSSSNNTQETVTLLIPSGAVGAIIGSRGTHIRNISRIAGASIRIHVNADRDAKARVTIV- 461
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS----FTTRLLVPTSRIGCLIGKGGSI 391
E+ + Q +K++++ + TT++ +P +G +IGKGG
Sbjct: 462 ---------GVPESQWKAQFCIFDKLKQEGWFGNEEGRLTTQITIPGKLVGRIIGKGGVN 512
Query: 392 ITEMRRLTKANIRI 405
+ E++R+T + + I
Sbjct: 513 VRELQRITSSEVTI 526
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 14/160 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE--GDDCLITVSSKEFFEDTL 343
L+++ P + +G +IGKGG+ + QI Q + +VD E G D + T+
Sbjct: 196 LKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATIYGAPEACGAA 255
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ I +VR K E+D+ L ++L + IG LIG+ G + ++ T I
Sbjct: 256 AIRILEIVR-------KEEKDNEL---PLKVLAHNALIGRLIGRDGRNLKHVQDKTGTRI 305
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
I L D + I G++ +A Q+ +LR
Sbjct: 306 AISSMHELSPYNM--DRTISIHGEVKGISEAEQQITEKLR 343
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 145/331 (43%), Gaps = 65/331 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ GE VK++R ++ +++ I E GS ER++T+ ++D + F
Sbjct: 30 RLLMHGKEVGSIIGKKGETVKRIREESSARVNISE---GSCPERIITITGSTD--SVFRA 84
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
+K+ + + A G S VT +L++P+ Q G +IGKGG ++
Sbjct: 85 FTMIT-------YKLEEDLTALVANGTISSK--PPVTLRLVIPASQCGSLIGKGGAKIKE 135
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN--------- 215
IR TGAQI++ D LP+ R V ISG V + + I + + ++
Sbjct: 136 IRESTGAQIQVAGD-LLPNSTERG---VTISGNQDSVIQCVKLICTVILESPPKGATIPY 191
Query: 216 ---PSRSQHLLAS----------------------------AISNSHSSSGSLVGPTAAT 244
PS + L+A A+ N + S +
Sbjct: 192 RPTPSPAALLIAGNQVFEASDFAPHPLYSVTQGGLDLQQAYALQNQYGIPHSELAKLHQL 251
Query: 245 PIV-GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGG 303
+ G++P+ P T L+ P S+ + S L+ P IG +IG+ G
Sbjct: 252 SVQQGLSPIAQP-----ASTIMPGKLLLHFLPSGMDSTSQTSQELLIPNDLIGSIIGRQG 306
Query: 304 AIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IN+IRQ SGA IK+ S D +T++
Sbjct: 307 TKINEIRQVSGAQIKIGSQLDGTSDRHVTIT 337
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 80/166 (48%), Gaps = 30/166 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LRL+ +G +IGK G + +IR+ES A + + S IT S+ F
Sbjct: 27 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCPERIITITGSTDSVF---- 82
Query: 344 SATIEAVVRLQPRCSEKIERD------SGLIS----FTTRLLVPTSRIGCLIGKGGSIIT 393
R + K+E D +G IS T RL++P S+ G LIGKGG+ I
Sbjct: 83 --------RAFTMITYKLEEDLTALVANGTISSKPPVTLRLVIPASQCGSLIGKGGAKIK 134
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
E+R T A I++ + LP + + V ISG+ +D++IQ +
Sbjct: 135 EIRESTGAQIQVA-GDLLP---NSTERGVTISGN----QDSVIQCV 172
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 62/203 (30%)
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F H + E+ GD G +T +LL+ ++G +IGK G+ V+ IR E+ A++ I
Sbjct: 6 FHSHITMNCEQDFGD--GGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNIS 63
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ SC R ++ I+G V +A I +L ++ L + ++N SS
Sbjct: 64 EG----SCPER---IITITGSTDSVFRAFTMITYKLEED-------LTALVANGTISSKP 109
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
V +LRLV P + G
Sbjct: 110 PV----------------------------------------------TLRLVIPASQCG 123
Query: 297 GVIGKGGAIINQIRQESGAAIKV 319
+IGKGGA I +IR+ +GA I+V
Sbjct: 124 SLIGKGGAKIKEIRESTGAQIQV 146
>gi|218189965|gb|EEC72392.1| hypothetical protein OsI_05673 [Oryza sativa Indica Group]
gi|222622089|gb|EEE56221.1| hypothetical protein OsJ_05205 [Oryza sativa Japonica Group]
Length = 442
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P +V+R + K+G +IGR G+ +K+L DT++++R+ E + + + SA++E+
Sbjct: 94 PGASVFRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVLISATEES 153
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGG--HQVTAKLLVPSDQIGCVIG 156
A + PA DA K+ + E++ D+ G + +AKLLVPS Q +IG
Sbjct: 154 QA------ELPPAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCSAKLLVPSAQATHLIG 207
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
K G +++I+ TGA ++I+ L S + + +V I G V AL
Sbjct: 208 KQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHAL 256
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 88/179 (49%), Gaps = 9/179 (5%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEFFEDTLS 344
RLV +GG+IG+ G I ++ +++ A ++V ++++ + ++ +S+ E + L
Sbjct: 99 FRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVLISATEESQAELP 158
Query: 345 ATIEAVVRLQPRCS--EKIERDSGLI-----SFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
++A +++ + EKI D L + +LLVP+++ LIGK G I ++
Sbjct: 159 PAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCSAKLLVPSAQATHLIGKQGVRIKSIQE 218
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
T A ++I+ K L D+ +V I G AL V+ LR L D G + F
Sbjct: 219 TTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSVLGVLRKFLVD-HGVLHLF 276
>gi|198469242|ref|XP_001354960.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
gi|198146781|gb|EAL32016.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
Length = 521
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 189/426 (44%), Gaps = 77/426 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSQRNQRNTYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 121 HRKENV-GSLEKSITIYGNPENCTNAC-------------------KRILEVMQQEALST 160
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 161 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 218
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 219 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 262
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 263 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 319
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 320 TKGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 374
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 375 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 432
Query: 415 ASEDDE 420
A D+E
Sbjct: 433 AGGDEE 438
>gi|326500580|dbj|BAK06379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 143/335 (42%), Gaps = 70/335 (20%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P +V+R + K+G +IGR GE++K+L T++++R+ + G R+V + SA++ET
Sbjct: 91 PGASVFRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLI-SATEET 149
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS-----DGGHQVTAKLLVPSDQIGCV 154
A ++PA DA ++ V ++ G G +A+LLVP Q +
Sbjct: 150 QAE------LAPAMDAAVRIFKHV--NDIEGINPDFTLPVSGPEICSARLLVPKAQGRHL 201
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA----- 209
IGK G +Q ++ TG IRI+ + L S + + +V+I G + V AL +
Sbjct: 202 IGKQGTTIQLMQESTGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGLLRR 261
Query: 210 -----SRLH------------DNPSR------------SQHLLASAISNSHSSSGSLVGP 240
S LH N S+ +Q LL S + H+ +G
Sbjct: 262 FLVDHSVLHLFERKNEEVAEVQNSSKENQVTNDYALVVNQDLLLSDSRSHHNPNG----- 316
Query: 241 TAATPIVGIAPLMGPYGGYKGD--TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGV 298
G Y Y D +SR + +S ++R+ P A +
Sbjct: 317 -------------GRYLSYGHDPSVCDPYSRDIRRPTVSLISKITQTMRIPLPQAE--EI 361
Query: 299 IGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
IG G I IR SGA + ++ + D+ L+++
Sbjct: 362 IGVRGQTIAHIRSVSGAMVVLEETGNYLDEVLVSI 396
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
RLV +GG+IG+ G +I ++ + + A ++V + ++ +S+ E + L+
Sbjct: 96 FRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLISATEETQAELAP 155
Query: 346 TIEAVVRLQPRCS--EKIERD-----SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++A VR+ + E I D SG + RLLVP ++ LIGK G+ I M+
Sbjct: 156 AMDAAVRIFKHVNDIEGINPDFTLPVSGPEICSARLLVPKAQGRHLIGKQGTTIQLMQES 215
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T IRI+ K+ L ++ +V+I G +AL V+ LR L D
Sbjct: 216 TGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNALKSVLGLLRRFLVD 265
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 139/327 (42%), Gaps = 59/327 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMSLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGDTAGDWSRSLYSA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
+ D ++ + P D S++ S L P IG +I + GA IN
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIRRQGAKIN 295
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVS 334
+IRQ SGA IK+ + D +T++
Sbjct: 296 EIRQMSGAQIKIANPVEGSTDRQVTIT 322
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+I + G + IR +GAQI+I +D V
Sbjct: 266 DASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 320
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 321 ITGSAASISLAQYLINVRL 339
>gi|395751404|ref|XP_003780598.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Nova-2 [Pongo
abelii]
Length = 681
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 16/210 (7%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVP---GSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I+ VP G+ ERV V ++ NA
Sbjct: 136 KELIPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGTTERVCLVQGTAEALNAV 195
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 196 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 252
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
V+ + ++GA +++ + P + +V +SGE V KA+ I ++ ++P S
Sbjct: 253 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSC 309
Query: 222 L------LASAISNSHSSSGSLVGPTAATP 245
L +A ++NS+ + P P
Sbjct: 310 LNISYANVAGPVANSNPTGSPYASPADVLP 339
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 92/188 (48%), Gaps = 20/188 (10%)
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS-----SST 324
S Y+ P + L E+ L+ + P G +IGKGG I Q+++E+GA IK + T
Sbjct: 120 SYYNTP-NFLEEGEYFLKELIPSYAAGSIIGKGGQTIVQLQKETGATIKXXXXVPWHTGT 178
Query: 325 EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLL 375
CL+ +++ + + + I VR P+ K E + L TT +L+
Sbjct: 179 TERVCLVQGTAEAL--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLI 236
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL 435
VP S G +IGKGG+ + + + A +++ K P+ + + +V +SG+ + A+
Sbjct: 237 VPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAV 293
Query: 436 IQVMTRLR 443
++ +++
Sbjct: 294 SAIVQKVQ 301
>gi|145341361|ref|XP_001415781.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576004|gb|ABO94073.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 340
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 148/345 (42%), Gaps = 75/345 (21%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDETNA 101
++L GS+IG+GG + + + T ++I++ E PG+ +RVV
Sbjct: 47 LKFLISPSAAGSVIGKGGATINEFQALTGARIQLSRNREVFPGTNDRVV----------- 95
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
VS A+ +V +I + + E D Q L+VP+ GC+IGKGG
Sbjct: 96 ------IVSGDLSAILQVLHLIITKLVADGEGIDRMGQPQVALVVPNSSCGCIIGKGGSK 149
Query: 162 VQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS--- 217
+++ ++ A I++ +D LP C +D + I+G V +A+ +A+ L ++P+
Sbjct: 150 IRSFVEDSQADIKLSNQDRMLPGC---NDRTLTITGTIDCVLRAVALVATTLCEDPAYAT 206
Query: 218 ----RSQHLLASAIS-NSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
+S + + S +S ATP YG +G
Sbjct: 207 LVHRQSTYSVQSPLSLQGGGGGRRSGEFNRATP--------RRYGAGQG----------- 247
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
RDD E S+ + P + IG V+G+GG I +++ SG IKV ++ DD
Sbjct: 248 -GGRDD----ETSILVTIPDSLIGAVLGRGGRTIAEVQVASGCRIKV----SDRDD---- 294
Query: 333 VSSKEFFEDT------LSATIEAVVRLQPRCSEKIERDSGLISFT 371
FFE T +S + E V ++K+ + +SF+
Sbjct: 295 -----FFEGTRNRKVVISGSAEGVQMANYLLTQKLSAITAQMSFS 334
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 33/202 (16%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
+AP DD S F+L+ + + G VIGKGGA IN+ + +GA I++ +
Sbjct: 37 AAPIDDGS---FTLKFLISPSAAGSVIGKGGATINEFQALTGARIQLSRN---------- 83
Query: 333 VSSKEFFEDT------LSATIEAVVRLQPRCSEKIERDSGLISFTTR----LLVPTSRIG 382
+E F T +S + A++++ K+ D I + L+VP S G
Sbjct: 84 ---REVFPGTNDRVVIVSGDLSAILQVLHLIITKLVADGEGIDRMGQPQVALVVPNSSCG 140
Query: 383 CLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
C+IGKGGS I ++A+I++ ++ + + +D + I+G +D A+ V T L
Sbjct: 141 CIIGKGGSKIRSFVEDSQADIKLSNQDRM--LPGCNDRTLTITGTIDCVLRAVALVATTL 198
Query: 443 -----RANLFDREGAVSTFVPV 459
A L R+ S P+
Sbjct: 199 CEDPAYATLVHRQSTYSVQSPL 220
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 91/182 (50%), Gaps = 35/182 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R+++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMRVESGARINISEG--NCPERIVTITGPTD-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---------VTAKLLVPSDQIGCVIG 156
A+FK + + +ED + VT +L+VP+ Q G +IG
Sbjct: 67 ---------AIFKAFAMI---AFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIG 114
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++P
Sbjct: 115 KGGSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGMPDAIIQCVKQICVVMLESP 170
Query: 217 SR 218
+
Sbjct: 171 PK 172
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
++GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 TEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I+NS ++S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAFKFEED-----------INNSMTNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R ESGA I + + IT + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEGNCPERIVTITGPTDAIFK--- 70
Query: 344 SATIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
A + + E I + T RL+VP S+ G LIGKGGS I E+R
Sbjct: 71 -----AFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
T A +++ + LP + + V ISG DA+IQ + ++ + + +T
Sbjct: 126 STGAQVQVA-GDMLP---NSTERAVTISG----MPDAIIQCVKQICVVMLESPPKGAT-- 175
Query: 458 PVLPYIP 464
+PY P
Sbjct: 176 --IPYRP 180
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 273 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 307
>gi|348517827|ref|XP_003446434.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Oreochromis niloticus]
Length = 601
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 84/413 (20%), Positives = 182/413 (44%), Gaps = 58/413 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++++S + +
Sbjct: 199 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEGCS 258
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A A + D ++ +E + + +D +V K++ ++ +G +IGK G+
Sbjct: 259 A-------------ACRMILD-IMHQEAKDTKTAD---EVPLKIMAHNNFVGRLIGKEGR 301
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ I +T +I I L+D L + + + G +A +I ++ +
Sbjct: 302 NLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIEACCQAEVEIMKKVRE---A 354
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ +H G +G G+ G + AP +
Sbjct: 355 YENDIAAMNQQTHLIPGLNLGALGL-----FPSSSNMPPPPPGNAVGGTPYGCFGAPEQE 409
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
++ + P +G +IGK G I Q+ + +GA+IK+ + + + +
Sbjct: 410 ------TVHVYIPAQAVGAIIGKKGQHIKQLSRFAGASIKIAPAESPDSKMRMVI----- 458
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + + + G +IGKGG +
Sbjct: 459 ----VTGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKMAAAAAGRVIGKGGKTVN 514
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDL---DLAKDALIQVMTRLR 443
E++ LT A + ++P+E P D +V+I+G LA+ + ++T+++
Sbjct: 515 ELQNLTAAEV-VVPREQTPD--ENDQVIVKINGHFYASQLAQRKIRDILTQVK 564
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 46/220 (20%), Positives = 92/220 (41%), Gaps = 17/220 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ LRL+ P +G +IGK GA I I +++ + I V G + K +
Sbjct: 199 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAG------AAEKPISIHS 252
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLI-SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
A R+ + +D+ +++ + +G LIGK G + ++ + T
Sbjct: 253 TPEGCSAACRMILDIMHQEAKDTKTADEVPLKIMAHNNFVGRLIGKEGRNLKKIEQDTDT 312
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
I I P ++L E + + G ++ A +++M ++R + A++ ++P
Sbjct: 313 KITISPLQDLTLYNPE--RTITVKGSIEACCQAEVEIMKKVREAYENDIAAMNQQTHLIP 370
Query: 462 YIPVSENGSDGLNYESRDSKRHGR-----GPPYGGYGSSD 496
+ + G+ GL S + G PYG +G+ +
Sbjct: 371 GLNL---GALGLFPSSSNMPPPPPGNAVGGTPYGCFGAPE 407
>gi|313226221|emb|CBY21364.1| unnamed protein product [Oikopleura dioica]
Length = 545
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 167/378 (44%), Gaps = 61/378 (16%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSA 95
G DT + L P +G+IIG+GG V+Q+ S+ R+ PGS+ +V T+Y A
Sbjct: 176 GSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSD-KVATIYGA 234
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ A A ++ + V EE +++ K+L + IG +I
Sbjct: 235 PEACGA-------------AAIRILEIVRKEE--------KDNELPLKVLAHNALIGRLI 273
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH-- 213
G+ G+ +++++ +TG +I I L + D + I GE + +A QI +L
Sbjct: 274 GRDGRNLKHVQDKTGTRIAISSMHELSPYNM--DRTISIHGEVKGISEAEQQITEKLRQF 331
Query: 214 --DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
D + SQ L +++ + A P ++ Y+G+++ +
Sbjct: 332 ETDMAAMSQQSLYPGLNSQQMQMFPGLQSPTAPPAYNVS--------YQGNSSSN----- 378
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
+ + ++ L+ P +G +IG G I I + +GA+I++ + E D
Sbjct: 379 ---------NTQETVTLLIPSGAVGAIIGSRGTHIRNISRIAGASIRIHALEGENADADR 429
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS----FTTRLLVPTSRIGCLIGK 387
++ T+ E+ + Q +K++++ + TT++ +P +G +IGK
Sbjct: 430 DAKARV----TIVGVPESQWKAQFCIFDKLKQEGWFGNEEGRLTTQITIPGKLVGRIIGK 485
Query: 388 GGSIITEMRRLTKANIRI 405
GG + E++R+T + + I
Sbjct: 486 GGVNVRELQRITSSEVTI 503
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE--GDDCLITVSSKEF 338
S + L+++ P + +G +IGKGG+ + QI Q + +VD E G D + T+
Sbjct: 177 SPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATIYGAPE 236
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
+ I +VR K E+D+ L ++L + IG LIG+ G + ++
Sbjct: 237 ACGAAAIRILEIVR-------KEEKDNEL---PLKVLAHNALIGRLIGRDGRNLKHVQDK 286
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T I I L D + I G++ +A Q+ +LR
Sbjct: 287 TGTRIAISSMHELSPYNM--DRTISIHGEVKGISEAEQQITEKLR 329
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 148/343 (43%), Gaps = 41/343 (11%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE 86
GDD+++ T R+L G IIG+GG + + + ++I++ E PG+
Sbjct: 33 GDDKEK------PTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTN 86
Query: 87 ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+R++ V DE A+ + ++++AE G+E ++ + +L+V
Sbjct: 87 DRIIMVSGLFDEV-------------MKAMELILEKLLAE---GEEFNEAEARPKVRLVV 130
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG----EASVVK 202
P+ G +IGKGG +++ E+ A I+I ++ + D LV ++G + + +
Sbjct: 131 PNSSCGGIIGKGGATIKSFIEESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAID 188
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
L +++ +H P+ S + ++ + G VG A GP GY
Sbjct: 189 LILKKLSEDVHYPPNLSSPFPYAGLTFPN-YPGVPVGYMIPQVPYNNAVNYGPNNGY--- 244
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVD 320
G + + S P +S E L +A+ IG V+G+ G I +I Q SGA IK+
Sbjct: 245 -GGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGARIKI- 302
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
S GD T K T A A + R S ER
Sbjct: 303 --SDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSER 343
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE---GDDCLITVS 334
D K LR + G +IGKGG+ IN + +SGA I++ S +D +I VS
Sbjct: 34 DDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 93
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
F++ + A +E + L+ +E E + RL+VP S G +IGKGG+ I
Sbjct: 94 G--LFDEVMKA-MELI--LEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKS 148
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVS 454
+ A I+I P++N D +V ++G D +A+ ++ +L ++ S
Sbjct: 149 FIEESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPPNLSS 206
Query: 455 TF------VPVLPYIPV 465
F P P +PV
Sbjct: 207 PFPYAGLTFPNYPGVPV 223
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSD 189
+E D + LV + GC+IGKGG + + +S++GA+I++ + E P +D
Sbjct: 31 EEGDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGT---ND 87
Query: 190 ELVQISGEASVVKKALCQIASRL 212
++ +SG V KA+ I +L
Sbjct: 88 RIIMVSGLFDEVMKAMELILEKL 110
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 141/312 (45%), Gaps = 60/312 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
++FK +I E+L D + + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------SIFKAFSMII-EKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR GAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESAGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIV---GIA-PLMGPYGGYKGDTAGDWSRSLYSA 274
I SGS P++ G A + G + + D ++ +
Sbjct: 173 -----GVTIPYRPKPSGS--------PVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 275 PRD------------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
P D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 220 PFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP 279
Query: 323 STEGDDCLITVS 334
D +T++
Sbjct: 280 VEGSTDRQVTIT 291
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++++++NS ++S V
Sbjct: 60 TLAGPTTSIFKAFSMIIEKLEED-------ISTSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
++RLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TIRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 AGAQVQV 133
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + + + + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFK-AF 72
Query: 344 SATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
S IE +L+ S + + T RL+VP S+ G LIGKGG I E+R A
Sbjct: 73 SMIIE---KLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEIRESAGA 129
Query: 402 NIRI 405
+++
Sbjct: 130 QVQV 133
>gi|402225510|gb|EJU05571.1| hypothetical protein DACRYDRAFT_20011 [Dacryopinax sp. DJM-731 SS1]
Length = 413
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 121/281 (43%), Gaps = 40/281 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P++ R L + IIG+GG V ++R + ++I + E++PG+ ER++ V D
Sbjct: 119 PQNIHMRALIVTQDASIIIGKGGSHVNEIREKSGARITVSESIPGNPERILNVTGPLD-- 176
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A F + R I +E G VT K ++P+ ++G +IGK G
Sbjct: 177 ------------AVAKAFGLIVRQINDEPFEQPSVPGSRAVTIKFIIPNSRMGTLIGKAG 224
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPSR 218
++ I+ +GA++ + LP R ++ +SG A + A + S L+ +PS
Sbjct: 225 SKIKEIQEASGAKLH-ASEGLLPGSTER---VLNVSGVADAIHIATYYVGNSLLNSHPS- 279
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
S++H+S P A+T Y +T A
Sbjct: 280 --------YSSTHASYKQQRRPMASTTY------------YPPNTPVSNYGYPGPAAAPA 319
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S + + P +G +IGKGGA IN+IR SG IK+
Sbjct: 320 PVSLQQTQNFYIPNDLVGSIIGKGGAKINEIRHVSGCQIKI 360
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 98/203 (48%), Gaps = 30/203 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETN--AF 102
+++ P ++G++IG+ G +K+++ + +K+ E +PGS ERV+ V +D + +
Sbjct: 208 KFIIPNSRMGTLIGKAGSKIKEIQEASGAKLHASEGLLPGSTERVLNVSGVADAIHIATY 267
Query: 103 EDGDKFVSP-----AQDALFKVHDRVIAEELRGDEDSDGGH---------------QVTA 142
G+ ++ + A +K R +A ++ + Q T
Sbjct: 268 YVGNSLLNSHPSYSSTHASYKQQRRPMASTTYYPPNTPVSNYGYPGPAAAPAPVSLQQTQ 327
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLP---SCALR----SDELVQIS 195
+P+D +G +IGKGG + IR +G QI+IL+ P S A++ ++ +V I+
Sbjct: 328 NFYIPNDLVGSIIGKGGAKINEIRHVSGCQIKILEPGQGPAPGSGAVQPMSETERMVTIT 387
Query: 196 GEASVVKKALCQIASRLHDNPSR 218
G + ++ A+ +ASR+ R
Sbjct: 388 GGIANIQMAVQLLASRIEQEKQR 410
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 59/109 (54%), Gaps = 7/109 (6%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG+ +N+IR++SGA I V S + ++ V+ D ++ +VR
Sbjct: 136 IIGKGGSHVNEIREKSGARITVSESIPGNPERILNVTGP---LDAVAKAFGLIVRQ--IN 190
Query: 358 SEKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
E E+ S G + T + ++P SR+G LIGK GS I E++ + A +
Sbjct: 191 DEPFEQPSVPGSRAVTIKFIIPNSRMGTLIGKAGSKIKEIQEASGAKLH 239
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 12/87 (13%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL-------PKENLPKIASEDDEMVQ 423
T +P +G +IGKGG+ I E+R ++ I+IL P + SE + MV
Sbjct: 326 TQNFYIPNDLVGSIIGKGGAKINEIRHVSGCQIKILEPGQGPAPGSGAVQPMSETERMVT 385
Query: 424 ISGDLDLAKDALIQVMTRLRANLFDRE 450
I+G + A IQ+ +L A+ ++E
Sbjct: 386 ITGGI-----ANIQMAVQLLASRIEQE 407
>gi|417410720|gb|JAA51826.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 440
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 143/311 (45%), Gaps = 46/311 (14%)
Query: 40 PEDTV---YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSA 95
PE +V R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+
Sbjct: 49 PELSVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI--- 102
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ T A ++ FK+ + + + G S VT +L++P+ Q G +I
Sbjct: 103 TGSTAAVFHAVSMIA------FKLDEDLCSAPANGGTVSR--PPVTLRLVIPASQCGSLI 154
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GK G ++ IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++
Sbjct: 155 GKAGTKIKEIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILES 210
Query: 216 PSRSQH------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT 263
P + LL++ S V P T + ++ P+
Sbjct: 211 PPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSMVP 270
Query: 264 AGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
D P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + +
Sbjct: 271 GLD--------PGAQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQA 318
Query: 324 TEGDDCLITVS 334
+ +T++
Sbjct: 319 EGAGERHVTIT 329
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 52 SVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 111
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRR 397
+ ++ A + CS + G +S T RL++P S+ G LIGK G+ I E+R
Sbjct: 112 ---AVSMIAFKLDEDLCSAP--ANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 166
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVST 455
T A +++ + LP + + V +SG DA+I + ++ A + + +GA
Sbjct: 167 TTGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIP 218
Query: 456 FVPVL 460
+ P L
Sbjct: 219 YHPSL 223
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 80/189 (42%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 46 EEEPELSVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 98
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L SA +N
Sbjct: 99 ITTITGSTAAVFHAVSMIAFKLDED-------LCSAPAN--------------------- 130
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
GG +S +LRLV P + G +IGK G I +IR
Sbjct: 131 ------GG-------------------TVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 165
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 166 ETTGAQVQV 174
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 273 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 314
>gi|195350752|ref|XP_002041902.1| GM11285 [Drosophila sechellia]
gi|194123707|gb|EDW45750.1| GM11285 [Drosophila sechellia]
Length = 566
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 189/426 (44%), Gaps = 77/426 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 54 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 113
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 114 HRKENV-GSLEKSITIYGNPENCTNACKR-------------------ILEVMQQEAIST 153
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 154 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 211
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 212 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 255
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 256 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 312
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 313 TKGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 367
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 368 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 425
Query: 415 ASEDDE 420
+ D+E
Sbjct: 426 SGGDEE 431
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 295 QETTYLYI-PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 353
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ A + + +++ E D ++T +LLV S Q+G +I
Sbjct: 354 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV---RLTVELLVASSQVGRII 397
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLHD 214
GKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 398 GKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLST 457
Query: 215 NP 216
NP
Sbjct: 458 NP 459
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 142/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A+ H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAVGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN------CPERII--TL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 144/343 (41%), Gaps = 75/343 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL------ 212
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 213 -------HDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
PS S + A + S H++ + P P + + G
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ 235
Query: 256 YGGYKGD----------------TAGD--WSRSLYSAPRD------DLSSKEFSLRLVCP 291
Y + D T G+ +S S+P D S++ S L P
Sbjct: 236 YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIP 295
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 296 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 338
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 274 EVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VE 328
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
+D V I+G A+ + A I RL
Sbjct: 329 GSTDRQVTITGSAASISLAQYLINVRL 355
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/301 (26%), Positives = 127/301 (42%), Gaps = 39/301 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
+ V + + + IGSIIG+ G +KQ R ++ + I I + + ER+V+V D
Sbjct: 26 NLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDG--STPERIVSVTGTKD---- 79
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
A F + + + +EL+ + S+ VT +L+VP Q G +IGKGG
Sbjct: 80 ----------AVVTAFALIGQKLEDELKSNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAK 129
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
++ IR +GA + ++ E LP + R+ V +SG ++ + + + + P R H
Sbjct: 130 IKEIREVSGASV-VVAGEFLPGSSERA---VTLSGTPEALETCIDLLCGVMIEFPPRG-H 184
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-------GYKGDTAGDWSRSLYSA 274
+ G GP G GPYG G+
Sbjct: 185 PMPYTPHKLQQQFG-FYGPPQG---FGYP---GPYGMPHAFPNGFMAGRGPYGGGRKGKG 237
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD---CLI 331
P S + +G +IG+ G+ I IRQ SGA+IK+ S GDD LI
Sbjct: 238 PPPPQPGPITSHTMTILKGAVGSIIGQKGSYITGIRQMSGASIKIGDSEN-GDDKREVLI 296
Query: 332 T 332
T
Sbjct: 297 T 297
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 18/168 (10%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S L+++ +IG +IGK G+ I Q RQES A I + ST + +++V+
Sbjct: 24 SSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGST--PERIVSVTG----- 76
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSG---LISFTTRLLVPTSRIGCLIGKGGSIITEMRR 397
T A + A + + ++++ +S T RL+VP S+ G +IGKGG+ I E+R
Sbjct: 77 -TKDAVVTAFALIGQKLEDELKSNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAKIKEIRE 135
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGD---LDLAKDALIQVMTRL 442
++ A++ ++ E LP + V +SG L+ D L VM
Sbjct: 136 VSGASV-VVAGEFLP---GSSERAVTLSGTPEALETCIDLLCGVMIEF 179
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 130/366 (35%), Gaps = 127/366 (34%)
Query: 137 GH--QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
GH + K+++ IG +IGK G ++ R E+ A I I D P + +V +
Sbjct: 22 GHSSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINI-SDGSTP------ERIVSV 74
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
+G V A I +L D SNS S++ TP V
Sbjct: 75 TGTKDAVVTAFALIGQKLEDELK----------SNSKSNT---------TPPV------- 108
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
+LRL+ P + G +IGKGGA I +IR+ SG
Sbjct: 109 ------------------------------TLRLIVPGSQCGSIIGKGGAKIKEIREVSG 138
Query: 315 AAIKVDSSSTEG-DDCLITVS-SKEFFEDTLSATIEAVVRLQPR------CSEKIERDSG 366
A++ V G + +T+S + E E + ++ PR K+++ G
Sbjct: 139 ASVVVAGEFLPGSSERAVTLSGTPEALETCIDLLCGVMIEFPPRGHPMPYTPHKLQQQFG 198
Query: 367 -----------------------------------------------LISFTTRLLVPTS 379
+ S T +L
Sbjct: 199 FYGPPQGFGYPGPYGMPHAFPNGFMAGRGPYGGGRKGKGPPPPQPGPITSHTMTIL--KG 256
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
+G +IG+ GS IT +R+++ A+I+I EN +D V I+G + A +
Sbjct: 257 AVGSIIGQKGSYITGIRQMSGASIKIGDSEN-----GDDKREVLITGTAEAVGLAQFLIN 311
Query: 440 TRLRAN 445
RLR +
Sbjct: 312 ARLRQD 317
>gi|321468687|gb|EFX79671.1| hypothetical protein DAPPUDRAFT_225024 [Daphnia pulex]
Length = 573
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 99/220 (45%), Gaps = 41/220 (18%)
Query: 17 DYADHGPNKRRYTGD----DRDQFIIGPEDTVY-RYLCPIRKIGSIIGRGGEIVKQLRID 71
D +H KR GD DR + + ++Y + L P G+IIG+GGE + Q++ +
Sbjct: 25 DSPEHSERKRPLDGDSDLSDRKKSHFTGDGSIYLKVLVPSVAAGAIIGKGGETIAQVQKE 84
Query: 72 TKSKIRIGET---VPGSEERVVTVYSASDETNAF---------EDGDKFVSPAQDALFKV 119
++I++ + PG+ ERV + ++ + + D PA D
Sbjct: 85 VNARIKMSKANDFYPGTTERVCLIKGTTESVMSMLTFICEKIRDKPDPNAKPAMDF---- 140
Query: 120 HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI---L 176
D + K+LVP+ G +IGKGG ++ I+ E+GA I+I
Sbjct: 141 -----------DSKTPAERDKQVKILVPNSTAGMIIGKGGSFIKQIKEESGAYIQISQKA 189
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KD+ L + + + G++ +KA C I S++ ++P
Sbjct: 190 KDQAL------QERCITVIGDSDCNRKACCMILSKIAEDP 223
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 25/172 (14%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEFFE 340
L+++ P G +IGKGG I Q+++E A IK+ ++ T CLI +++
Sbjct: 58 LKVLVPSVAAGAIIGKGGETIAQVQKEVNARIKMSKANDFYPGTTERVCLIKGTTESVM- 116
Query: 341 DTLSATIEAVVRLQPRCSEK----------IERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
++ I +R +P + K ERD + ++LVP S G +IGKGGS
Sbjct: 117 -SMLTFICEKIRDKPDPNAKPAMDFDSKTPAERDKQV-----KILVPNSTAGMIIGKGGS 170
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
I +++ + A I+I K K + + + + GD D + A +++++
Sbjct: 171 FIKQIKEESGAYIQISQKA---KDQALQERCITVIGDSDCNRKACCMILSKI 219
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 71/178 (39%), Gaps = 52/178 (29%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDELVQISGEASVV 201
K+LVPS G +IGKGG+ + ++ E A+I++ K ++ P R + I G V
Sbjct: 59 KVLVPSVAAGAIIGKGGETIAQVQKEVNARIKMSKANDFYPGTTER---VCLIKGTTESV 115
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
L I ++ D P P P +
Sbjct: 116 MSMLTFICEKIRDKPD---------------------------------PNAKPAMDFDS 142
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
T + ++ ++++ P + G +IGKGG+ I QI++ESGA I++
Sbjct: 143 KTPAE---------------RDKQVKILVPNSTAGMIIGKGGSFIKQIKEESGAYIQI 185
>gi|195481990|ref|XP_002101863.1| GE15370 [Drosophila yakuba]
gi|194189387|gb|EDX02971.1| GE15370 [Drosophila yakuba]
Length = 566
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 199/454 (43%), Gaps = 82/454 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 55 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 114
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 115 HRKENV-GSLEKSITIYGNPENCTNACKR-------------------ILEVMQQEALST 154
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 155 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 212
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 213 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 256
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 257 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 313
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 314 TKGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 368
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 369 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 426
Query: 415 ASEDDEM-VQISGDLDLAKDALIQVMTRLRANLF 447
+ D+E V I G + A R+RA +
Sbjct: 427 SGGDEETPVHIIGPFYSVQSA----QRRIRAMML 456
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 296 QETTYLYI-PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 354
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ A + + +++ E D ++T +LLV S Q+G +I
Sbjct: 355 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV---RLTVELLVASSQVGRII 398
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLHD 214
GKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 399 GKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLST 458
Query: 215 NP 216
NP
Sbjct: 459 NP 460
>gi|194889982|ref|XP_001977205.1| GG18899 [Drosophila erecta]
gi|190648854|gb|EDV46132.1| GG18899 [Drosophila erecta]
Length = 568
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 105/454 (23%), Positives = 199/454 (43%), Gaps = 82/454 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 55 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 114
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 115 HRKENV-GSLEKSITIYGNPENCTNACKR-------------------ILEVMQQEALST 154
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 155 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 212
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 213 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 256
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 257 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 313
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 314 TKGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQFMIFEK 368
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 369 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 426
Query: 415 ASEDDEM-VQISGDLDLAKDALIQVMTRLRANLF 447
+ D+E V I G + A R+RA +
Sbjct: 427 SGGDEETPVHIIGPFYSVQSA----QRRIRAMML 456
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 296 QETTYLYI-PNNAVGAIIGTKGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 354
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A F + +++ E G +D ++T +LLV S Q+G +
Sbjct: 355 PEG-------------QWKAQFMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 397
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 398 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLS 457
Query: 214 DNP 216
NP
Sbjct: 458 TNP 460
>gi|348524725|ref|XP_003449873.1| PREDICTED: RNA-binding protein Nova-1-like [Oreochromis niloticus]
Length = 503
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 20/213 (9%)
Query: 15 QTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKS 74
+T + G KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T +
Sbjct: 45 ETPAEEAGCTKRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGA 96
Query: 75 KIRIGET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELR 129
I++ ++ PG+ ERV + + N + +K Q A ++ +
Sbjct: 97 TIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEPVSILQPQTT 156
Query: 130 GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSD 189
+ D AKL+VP+ G +IGKGG V+ + ++GA +++ + P +
Sbjct: 157 VNPD----RVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQE 209
Query: 190 ELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
+V ISGE +KA+ I ++ ++P S L
Sbjct: 210 RVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCL 242
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 64 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 123
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I VR P+ ++K E S L TT +L+VP S G +IGKG
Sbjct: 124 L--NGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKG 181
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V ISG+ + + A+ ++ +++
Sbjct: 182 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEIIVQKIQ 233
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 390 ASNGYLNASSPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 449
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 450 RIQISKKGEFIPGTRNRK---VTITGSPAATQAAQYLISQRI 488
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 139/341 (40%), Gaps = 74/341 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-- 257
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 258 ------------------------GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVA 293
G+ G + Y A D S++ S L P
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDA-SAQTTSHELTIPND 294
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG+ GA IN+IRQ SGA IK + D +T++
Sbjct: 295 LIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQVTIT 335
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+ +D V
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKTANP-----VEGSTDRQVT 333
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 334 ITGSAASISLAQYLINVRL 352
>gi|432881653|ref|XP_004073885.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like isoform 1 [Oryzias latipes]
Length = 585
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 177/401 (44%), Gaps = 63/401 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T SKI I + G+ E+ +T++S +
Sbjct: 194 DIPLRVLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITIHSTPEGC- 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S A + ++ + E L D+ ++ K+L ++ +G +IGK G+
Sbjct: 253 ---------SKACTTIMEIMQK---EAL----DTKFTEEIPLKILAHNNFVGRLIGKEGR 296
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
++ I +TG +I I L+D L + + + G +A ++ ++ +++
Sbjct: 297 NLKKIEQDTGTKITISPLQDLTL----YNPERTITVKGSIEACSRAEEEVMKKVREAYES 352
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG---PYGGYKGDTAGDWSRSLY 272
+ +L ++ I + ++ L + TP G+ P M P G + G S
Sbjct: 353 DMAAMNLQSNLIPGLNLNALGLF--PSGTP--GMGPSMSNFPPSGAHGG------CSSFG 402
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P + ++ L P +G +IGK G I Q+ +GA+IK+ + EG D
Sbjct: 403 GQPESE------TVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKI--APAEGMDAKQR 454
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ + EA + Q R K++ ++ + + VP+ G +IGK
Sbjct: 455 MV-------IIVGPPEAQFKAQCRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVIGK 507
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
GG + E++ LT A + ++P++ P D +V+ISG
Sbjct: 508 GGKTVNELQNLTCAEV-VVPRDQTPD--ENDQVIVKISGHF 545
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 79/181 (43%), Gaps = 41/181 (22%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I +++R+V +
Sbjct: 405 PESETVHLFIPALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDAKQRMVII------ 458
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
V P +A FK R+ E G ++ ++ A + VPS G V
Sbjct: 459 ----------VGPP-EAQFKAQCRIFGKLKEENFFGPKEEV---KLEAHIKVPSFAAGRV 504
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE----LVQISGEASVVKKALCQIAS 210
IGKGG+ V +++ T A++ + +D+ DE +V+ISG CQ+A
Sbjct: 505 IGKGGKTVNELQNLTCAEVVVPRDQ-------TPDENDQVIVKISGHFFA-----CQLAQ 552
Query: 211 R 211
R
Sbjct: 553 R 553
>gi|321258532|ref|XP_003193987.1| telomere length regulating RNA binding protein; Pbp2p [Cryptococcus
gattii WM276]
gi|317460457|gb|ADV22200.1| Telomere length regulating RNA binding protein, putative; Pbp2p
[Cryptococcus gattii WM276]
Length = 357
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 142/337 (42%), Gaps = 66/337 (19%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP+ R L + IIGRGG V ++R + +++ + E++PG+ ER++ V D
Sbjct: 76 GPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSGPLD- 134
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A F + R I +E G VT K ++P+ ++G VIGKG
Sbjct: 135 -------------AVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKG 181
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ I+ +GA++ + LP R ++ +SG A V A+ I + L + R
Sbjct: 182 GSKIKEIQEASGARLN-ASEAMLPGSTER---VLSVSGVADAVHIAVYYIGTILLEYQDR 237
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
P AT G Y+ SR
Sbjct: 238 Y--------------------PANAT------------GSYR----QSQSRGPPPNSNAP 261
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST--------EGDDCL 330
+ ++ P A +G +IG+GG+ IN+IR +S I+V T ++ L
Sbjct: 262 PPPGMQTQQIFIPNALVGAIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERL 321
Query: 331 ITVSSKEFFEDTLSATIEAVV-RLQPRCSEKIERDSG 366
+T++ + D ++A + + R++ ++ +E+++G
Sbjct: 322 VTITG---YPDNINAAVALLYSRVEAERAKLVEQNAG 355
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 3/128 (2%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ D ++ S+R + + +IG+GGA +N+IR++S A + V S + ++ VS
Sbjct: 72 KPDPGPQQISMRSLIVTQDASIIIGRGGAHVNEIREKSSARVTVSESIPGNPERILNVSG 131
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
D ++ +VR + G + T + ++P SR+G +IGKGGS I E+
Sbjct: 132 P---LDAVAKAFGLIVRRINDEPFDVPSVPGSRAVTIKFIIPNSRMGSVIGKGGSKIKEI 188
Query: 396 RRLTKANI 403
+ + A +
Sbjct: 189 QEASGARL 196
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 84/185 (45%), Gaps = 21/185 (11%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKE-- 337
S+ +++ + P + +G VIGKGG+ I +I++ SGA + + G + +++VS
Sbjct: 160 SRAVTIKFIIPNSRMGSVIGKGGSKIKEIQEASGARLNASEAMLPGSTERVLSVSGVADA 219
Query: 338 -------------FFEDTLSATIEAVVRL-QPRCSEKIERDSGLISFTTR-LLVPTSRIG 382
++D A R Q R T+ + +P + +G
Sbjct: 220 VHIAVYYIGTILLEYQDRYPANATGSYRQSQSRGPPPNSNAPPPPGMQTQQIFIPNALVG 279
Query: 383 CLIGKGGSIITEMRRLTKANIRIL-PKENLP--KIASEDDEMVQISGDLDLAKDALIQVM 439
+IG+GGS I E+R + IR+ P +P A+ ++ +V I+G D A+ +
Sbjct: 280 AIIGRGGSKINEIRSQSSCQIRVTDPGTTVPGGAAANPEERLVTITGYPDNINAAVALLY 339
Query: 440 TRLRA 444
+R+ A
Sbjct: 340 SRVEA 344
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 144/344 (41%), Gaps = 76/344 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL------ 212
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 213 -------HDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
PS S + A + S H++ + P P + + G
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ 235
Query: 256 YGGYKGD----------------TAGD--WSRSLYSAPRD-------DLSSKEFSLRLVC 290
Y + D T G+ +S S+P D S++ S L
Sbjct: 236 YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTI 295
Query: 291 PVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
P IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 296 PNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 339
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 283 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 337
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 338 ITGSAASISLAQYLINVRL 356
>gi|116787292|gb|ABK24450.1| unknown [Picea sitchensis]
Length = 357
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 158/357 (44%), Gaps = 55/357 (15%)
Query: 33 RDQFIIGPED------TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVP 83
RD I P + + R L GS+IG+GG V + + ++I++ E P
Sbjct: 30 RDGLIYEPSEDGSKTSSCLRLLVSNAAAGSVIGKGGATVSDFQTQSGARIQLSRNHEFFP 89
Query: 84 GSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA- 142
G+ +R++ V + +E + + ++ + L ED++ + T+
Sbjct: 90 GTTDRIILVTGSINE-----------------ILTAANLILQKLLSEAEDNNDVDEKTSQ 132
Query: 143 -KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASV 200
+L++P+ G +IGKGG +++ + A I++ +D+ LP SD LV I+G
Sbjct: 133 VRLVLPNSVCGGIIGKGGATIKSFVEHSQASIKLSSQDQILPGV---SDRLVTITGTLEQ 189
Query: 201 VKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP--YGG 258
+A+ I S+L ++P+ +Q+ A S +G P TP+ P G YG
Sbjct: 190 QLRAIFLIVSKLAEDPNYAQYANAPLSYTGGSVAGIQGIPGGYTPVGYGLPNYGSSVYGV 249
Query: 259 YKGDTAGDWSRSLYSAPRDDL--------SSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+ G + + A R L S S+++ P +G ++G+ G I I+
Sbjct: 250 NARNNKGLMAPLV--AMRSPLPIGVPLVASGALTSVKMAVPDDRVGVIVGRAGRTILDIQ 307
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR----LQPRCSEKIER 363
Q SGA IK+ S GD +S + T+S I+AV L+ R S +ER
Sbjct: 308 QVSGAKIKI---SDRGD----FISGTNDRQVTISGPIDAVQHARHMLEQRLSSDLER 357
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 18/196 (9%)
Query: 255 PYGGYKGDTAGDWSRS-LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
P GY + R L P +D S LRL+ A G VIGKGGA ++ + +S
Sbjct: 16 PASGYSTSPSRSPKRDGLIYEPSEDGSKTSSCLRLLVSNAAAGSVIGKGGATVSDFQTQS 75
Query: 314 GAAIKVDSS-----STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE-KIERDSGL 367
GA I++ + T L+T S E A + LQ SE + D
Sbjct: 76 GARIQLSRNHEFFPGTTDRIILVTGSINEILT-------AANLILQKLLSEAEDNNDVDE 128
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN-LPKIASEDDEMVQISG 426
+ RL++P S G +IGKGG+ I ++A+I++ ++ LP ++ D +V I+G
Sbjct: 129 KTSQVRLVLPNSVCGGIIGKGGATIKSFVEHSQASIKLSSQDQILPGVS---DRLVTITG 185
Query: 427 DLDLAKDALIQVMTRL 442
L+ A+ ++++L
Sbjct: 186 TLEQQLRAIFLIVSKL 201
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
+ ++ VP R+G ++G+ G I ++++++ A I+I + + I+ +D V ISG +D
Sbjct: 282 SVKMAVPDDRVGVIVGRAGRTILDIQQVSGAKIKISDRGDF--ISGTNDRQVTISGPIDA 339
Query: 431 AKDALIQVMTRLRANL 446
+ A + RL ++L
Sbjct: 340 VQHARHMLEQRLSSDL 355
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 143/317 (45%), Gaps = 64/317 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
++FK +I E+L D + + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------SIFKAFSMII-EKLEEDISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR GAQ+++ D LP+ R+ + ++G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESAGAQVQVAGD-MLPNSTERA---ITVAGTPQSIIECVKQICIVMLESPPK 172
Query: 219 SQHL----------------LASAISNSHSSSGSLV--GPTAATPIVGIAPLMGPY---G 257
+ A A+ H+ V GP+ T + +A P+
Sbjct: 173 GVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDVSEGPS-LTKLHQLAMQQSPFPIAH 231
Query: 258 GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
+G AG D S++ S L P IG +IG+ GA IN+IRQ SGA I
Sbjct: 232 SNQGFQAG-----------MDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQI 280
Query: 318 KVDSSSTEGDDCLITVS 334
K+ + D +T++
Sbjct: 281 KIANPVEGSTDRQVTIT 297
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 52/183 (28%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSA-------- 95
R + P + GS+IG+GG +K++R +++++ G+ +P S ER +TV
Sbjct: 100 MRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNSTERAITVAGTPQSIIECV 159
Query: 96 -----------------------SDETNAFEDGDKFVSPAQDA-----------LFKVHD 121
S F G + Q A L K+H
Sbjct: 160 KQICIVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDVSEGPSLTKLHQ 219
Query: 122 RVIAEELRGDEDSDGGHQV---------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
+ + S+ G Q + +L +P+D IGC+IG+ G + IR +GAQ
Sbjct: 220 LAMQQSPFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQ 279
Query: 173 IRI 175
I+I
Sbjct: 280 IKI 282
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++++++NS ++S V
Sbjct: 60 TLAGPTTSIFKAFSMIIEKLEED-------ISTSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
++RLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TMRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 AGAQVQV 133
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + + + + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFK-AF 72
Query: 344 SATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
S IE +L+ S + + T RL+VP S+ G LIGKGG I E+R A
Sbjct: 73 SMIIE---KLEEDISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGA 129
Query: 402 NIRI 405
+++
Sbjct: 130 QVQV 133
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 147/342 (42%), Gaps = 78/342 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP------------- 255
S + A SSGS P A + + L GP
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGPPQEAYTIQGQYAI 232
Query: 256 ---------------------YG--GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPV 292
+G G+ G + Y A D S++ S L P
Sbjct: 233 PQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWAGLDA-SAQTTSHELTIPN 291
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 292 DLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 333
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|432895613|ref|XP_004076075.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oryzias
latipes]
Length = 503
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 20/208 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 50 EAGCTKRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 101
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + N+ + +K Q A ++ + + D
Sbjct: 102 KSKDFYPGTTERVCLIQGTVEALNSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPD- 160
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V I
Sbjct: 161 ---RVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTI 214
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
SGE +KA+ I ++ ++P S L
Sbjct: 215 SGEPEQNRKAVEIIVQKIQEDPQSSSCL 242
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 64 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 123
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+++ I VR P+ ++K E S L TT +L+VP S G +IGKG
Sbjct: 124 L--NSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKG 181
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V ISG+ + + A+ ++ +++
Sbjct: 182 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEIIVQKIQ 233
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 390 ASNGYLNASSPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 449
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 450 RIQISKKGEFIPGTRNRK---VTITGSPAATQAAQYLISQRI 488
>gi|17530887|ref|NP_511111.1| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|24641108|ref|NP_727456.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|24641110|ref|NP_727457.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|7533029|gb|AAF63331.1|AF241237_1 IGF-II mRNA-binding protein [Drosophila melanogaster]
gi|17862978|gb|AAL39966.1| SD07045p [Drosophila melanogaster]
gi|22832057|gb|AAF47958.2| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|22832058|gb|AAN09274.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|22832059|gb|AAN09275.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|220947510|gb|ACL86298.1| Imp-PA [synthetic construct]
gi|220956906|gb|ACL90996.1| Imp-PA [synthetic construct]
Length = 566
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 189/426 (44%), Gaps = 77/426 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 54 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 113
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 114 HRKENV-GSLEKSITIYGNPENCTNACKR-------------------ILEVMQQEAIST 153
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 154 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 211
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 212 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 255
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 256 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 312
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 313 TRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 367
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 368 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 425
Query: 415 ASEDDE 420
+ D+E
Sbjct: 426 SGGDEE 431
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 295 QETTYLYI-PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 353
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ A + + +++ E D ++T +LLV S Q+G +I
Sbjct: 354 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV---RLTVELLVASSQVGRII 397
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLHD 214
GKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 398 GKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLST 457
Query: 215 NP 216
NP
Sbjct: 458 NP 459
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 138/323 (42%), Gaps = 43/323 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDETNAFE 103
R L P R G++IG+GGE +K+LR + + + T+P S+ ER+VT+ + D N
Sbjct: 108 RLLVPSRGAGAVIGKGGESIKRLRAECDATL----TIPDSQTPERIVTIVAEID--NVIR 161
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ + P D K D D++ + +LLV G +IG+GG ++
Sbjct: 162 CVNEII-PRLDECLKTRD--------SDDEGSARGESELRLLVHQSHAGAIIGRGGYRIK 212
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD----NPSRS 219
+R ET Q+++ C ++ ++QI G + + I + L + PSR
Sbjct: 213 ELREETSTQLKVYSQ----CCPQSTERVIQIIGVPEKIIACVILIINMLKEIPIKGPSRP 268
Query: 220 QHLLASAISNSHSSSG----------SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + H G G + AP PYGG +G G S
Sbjct: 269 YESMFYDPNFVHEYGGFPPDRNYRGMGPRGGMYGGGLPPRAPRF-PYGG-RGMGMG-VSP 325
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
+ + + + ++ P G +IGKGG IN+IR+ESGA I V+ +
Sbjct: 326 FPPAPFGGPMQTTQVTI----PNELGGTIIGKGGERINRIREESGAHIVVEPQQPNSER- 380
Query: 330 LITVSSKEFFEDTLSATIEAVVR 352
+IT+S T ++ VR
Sbjct: 381 IITISGSHAQIQTAQYLLQQCVR 403
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ L++ ++ LRL+ P G VIGKGG I ++R E A + + S T + ++T+ +
Sbjct: 97 QEALAAGKYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQT--PERIVTIVA 154
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIE-RD-----SGLISFTTRLLVPTSRIGCLIGKGG 389
+ + I V + PR E ++ RD S RLLV S G +IG+GG
Sbjct: 155 E------IDNVIRCVNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGG 208
Query: 390 SIITEMRRLTKANIRI 405
I E+R T +++
Sbjct: 209 YRIKELREETSTQLKV 224
>gi|388579892|gb|EIM20211.1| hypothetical protein WALSEDRAFT_33458 [Wallemia sebi CBS 633.66]
Length = 349
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 130/295 (44%), Gaps = 55/295 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L R IIG+GG+ + ++R + K+ + ++P + ER++T D
Sbjct: 41 RSLIDTRDASIIIGKGGQNIAKIRETSGIKLVVSGSIPNNPERLLTATGQLD-------- 92
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
A F + R I +E G VT K +P+ ++G +IG+ G ++ I
Sbjct: 93 ------AVSKAFGLVVRTINDEDFNQPSLPGSKAVTLKFAIPNMKMGFIIGRAGAKIKEI 146
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN---PSRSQHL 222
+ +GA+I D LP+ ++ ++ I G A V A+ + L D PS+ +
Sbjct: 147 QEASGAKIST-SDYVLPNS---TERVLSIDGVADAVHIAIYHVGMILADQTAVPSKERGD 202
Query: 223 LASAISNSH---SSSGSL-----------VGPTAATPIVGIAPLM----GPYGGYKGDTA 264
+ S+ SS GS + PT A+ + G AP P+GGY
Sbjct: 203 RRRVQNQSYGDTSSYGSPAPYAAAPPVYGMLPTYASTVPGPAPAQLGGAPPFGGYP---- 258
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ P + +S+ ++ P +GG+IGKGG+ INQIR S +IK+
Sbjct: 259 --------TLPVAETTSQ----KIYVPNNLVGGLIGKGGSKINQIRYTSQCSIKI 301
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 12/142 (8%)
Query: 267 WSRSLYSAP---RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
+ R Y P +DD + ++R + + +IGKGG I +IR+ SG + V S
Sbjct: 20 YERPSYKRPHIVKDD--NPYLTVRSLIDTRDASIIIGKGGQNIAKIRETSGIKLVVSGSI 77
Query: 324 TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDS--GLISFTTRLLVPTSRI 381
+ L+T + + D +S VVR E + S G + T + +P ++
Sbjct: 78 PNNPERLLTATGQ---LDAVSKAFGLVVRTI--NDEDFNQPSLPGSKAVTLKFAIPNMKM 132
Query: 382 GCLIGKGGSIITEMRRLTKANI 403
G +IG+ G+ I E++ + A I
Sbjct: 133 GFIIGRAGAKIKEIQEASGAKI 154
>gi|24641097|ref|NP_727451.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|24641099|ref|NP_727452.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|24641101|ref|NP_727453.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|24641103|ref|NP_727454.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|24641105|ref|NP_727455.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
gi|22832052|gb|AAN09269.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|22832053|gb|AAN09270.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|22832054|gb|AAN09271.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|22832055|gb|AAN09272.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|22832056|gb|AAN09273.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
Length = 573
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 98/426 (23%), Positives = 189/426 (44%), Gaps = 77/426 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 121 HRKENV-GSLEKSITIYGNPENCTNAC-------------------KRILEVMQQEAIST 160
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 161 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 218
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 219 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 262
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 263 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 319
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 320 TRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 374
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 375 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 432
Query: 415 ASEDDE 420
+ D+E
Sbjct: 433 SGGDEE 438
Score = 40.0 bits (92), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 302 QETTYLYI-PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 360
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 361 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 403
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 404 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 463
Query: 214 DNP 216
NP
Sbjct: 464 TNP 466
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 28/218 (12%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GEIVK+ R ++ +KI I + ER+VT+ S T A +
Sbjct: 22 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTI---SGSTEAIYKAFSLIC- 75
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
KV + + + + + G +T +L+VP+ Q G +IGKGG ++ IR TGA
Sbjct: 76 -----TKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGA 130
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------------- 218
QI++ D LP R+ V ++G + + + I + + ++P +
Sbjct: 131 QIQVASDV-LPQSTERA---VTLTGTRDSITQCIFHICAVMVESPPKGVTIPYRAKPQMG 186
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY 256
+ +LA + + +S+GS G T +VG P P
Sbjct: 187 APVILAGGQAFTLASAGSAAGCDVGTMMVGGGPYNAPM 224
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+DD S+ +LRL+ +G +IGK G I+ + R+ESGA I + S I+ S+
Sbjct: 6 KDD-SNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTISGST 64
Query: 336 KEFFE--DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ ++ + +E + +Q + G T RL+VP S+ G LIGKGG+ I
Sbjct: 65 EAIYKAFSLICTKVEEFIEMQN--GKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIK 122
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
E+R T A I++ + LP+ + V ++G +D++ Q + + A + +
Sbjct: 123 EIREATGAQIQVA-SDVLPQ---STERAVTLTG----TRDSITQCIFHICAVMVE 169
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 76/187 (40%), Gaps = 58/187 (31%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V I
Sbjct: 8 DSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIVTI 60
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
SG + KA I +++ + G T AT I
Sbjct: 61 SGSTEAIYKAFSLICTKVEEFIEMQN------------------GKTGATAI-------- 94
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
G G T LRL+ P + G +IGKGG I +IR+ +G
Sbjct: 95 ---GKCGMT----------------------LRLIVPASQCGSLIGKGGNKIKEIREATG 129
Query: 315 AAIKVDS 321
A I+V S
Sbjct: 130 AQIQVAS 136
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
GG Q T ++ VP+D IGC+IGKGG + IR +GA IRI E A +D + I+
Sbjct: 310 GGGQQTHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSA-STDRTITIT 368
Query: 196 GEASVVKKALCQIASRL 212
G V A I R+
Sbjct: 369 GNPDSVALAQYLINMRI 385
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E+ AS D + I+G+ D
Sbjct: 315 THEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSAS-TDRTITITGNPD- 372
Query: 431 AKDALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 373 -SVALAQYLINMRISM 387
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
IG R + P + GS+IG+GG +K++R T ++I++ + +P S ER VT+
Sbjct: 94 IGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVASDVLPQSTERAVTLTGTR 153
Query: 97 D 97
D
Sbjct: 154 D 154
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 17/168 (10%)
Query: 51 IRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+ ++GSIIG+ GE VK++R ++ ++I I E ER+VT+ + T+A ++
Sbjct: 52 LWEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI---TGPTDAIFKAFAMIA 106
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+K + +I + + VT +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 107 ------YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTG 158
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
AQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 159 AQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 202
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 32/202 (15%)
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL 353
+G +IGK G + ++R+ESGA I + +EG+ C + T++ +A+ +
Sbjct: 54 EVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TITGPTDAIFKA 101
Query: 354 QPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ K E D + T RL+VP S+ G LIGKGGS I E+R T A +
Sbjct: 102 FAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQV 161
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTFVPVLP 461
++ + LP + + V ISG DA+IQ + ++ + + +GA + P
Sbjct: 162 QVA-GDMLP---NSTERAVTISGT----PDAIIQCVKQICVVMLESPPKGATIPYRPKPA 213
Query: 462 YIPVSENGSDGLNYESRDSKRH 483
PV G + + + H
Sbjct: 214 STPVIFAGGQAYTIQGQYAIPH 235
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 73/170 (42%), Gaps = 60/170 (35%)
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA 209
++G +IGK G+ V+ +R E+GA+I I + +C R +V I+G + KA IA
Sbjct: 54 EVGSIIGKKGETVKKMREESGARINISEG----NCPER---IVTITGPTDAIFKAFAMIA 106
Query: 210 SRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ ++ I NS S+S P + P V
Sbjct: 107 YKFEED-----------IINSMSNS-----PATSKPPV---------------------- 128
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+LRLV P + G +IGKGG+ I +IR+ +GA ++V
Sbjct: 129 ---------------TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV 163
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 131 RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPD 183
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 145/346 (41%), Gaps = 87/346 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Query: 219 ----------SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS 268
S + A SSGS P A + + L GP
Sbjct: 173 GVTIPYRPKPSSSPVIFAGGQDRYSSGSASYPHTAPSMCLNSDLEGP------PQEAYTI 226
Query: 269 RSLYSAPRDDL----------------------------------------SSKEFSLRL 288
+ Y+ P+ DL S++ S L
Sbjct: 227 QGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKGYWGLDASAQTTSHEL 286
Query: 289 VCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
P IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 287 TIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 332
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|353237678|emb|CCA69645.1| related to PBP2-PAB1 binding protein [Piriformospora indica DSM
11827]
Length = 406
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 128/285 (44%), Gaps = 44/285 (15%)
Query: 40 PEDTVY-RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
P T++ R L + IIG+GG V ++R + +K+ + E++PG+ ER++ V A D
Sbjct: 103 PASTIHMRCLIVTQDASIIIGKGGSHVNEIREKSNAKVMVSESIPGNPERILNVSGALD- 161
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A F + R I +E G G VT K ++P ++G VIGKG
Sbjct: 162 -------------AVSKAFGLIVRRINDEPMGP-SVPGSRAVTIKFIIPHSRMGSVIGKG 207
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ I+ +GA++ + LP ++ ++ ++G A + A I + L
Sbjct: 208 GAKIKEIQEASGARLN-ASEGMLPGS---TERILSVTGVADAIHIATYYIGNILIQ---- 259
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDT--AGDWSRSLYSA-- 274
Q A+ S+ S P A +G GG G G + + A
Sbjct: 260 -QQEAHGAVGLSYRQSRP---PRAFNETMG--------GGAPGQQYFPGQYQSPMMPAAV 307
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P L +++ + P +G +IGKGGA IN+IRQ S + IK+
Sbjct: 308 PSGPLQTQQIYI----PNDLVGCIIGKGGAKINEIRQTSQSQIKI 348
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/225 (22%), Positives = 101/225 (44%), Gaps = 37/225 (16%)
Query: 26 RRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPG 84
RR + + G +++ P ++GS+IG+GG +K+++ + +++ E +PG
Sbjct: 172 RRINDEPMGPSVPGSRAVTIKFIIPHSRMGSVIGKGGAKIKEIQEASGARLNASEGMLPG 231
Query: 85 SEERVVTVYSASDETN--AFEDGDKFVSPAQDALFKV--------HDRVIAEEL----RG 130
S ER+++V +D + + G+ + Q+A V R E + G
Sbjct: 232 STERILSVTGVADAIHIATYYIGNILIQ-QQEAHGAVGLSYRQSRPPRAFNETMGGGAPG 290
Query: 131 DEDSDGGHQV-------------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK 177
+ G +Q T ++ +P+D +GC+IGKGG + IR + +QI+I++
Sbjct: 291 QQYFPGQYQSPMMPAAVPSGPLQTQQIYIPNDLVGCIIGKGGAKINEIRQTSQSQIKIME 350
Query: 178 DEHLPSCAL--------RSDELVQISGEASVVKKALCQIASRLHD 214
+ + LV I+G+ ++ A+ + RL +
Sbjct: 351 PGAVGVGVGGQQAGPPNEGERLVVITGQPHNIQMAVGMLYHRLEE 395
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG+ +N+IR++S A + V S + ++ VS D +S +VR R
Sbjct: 121 IIGKGGSHVNEIREKSNAKVMVSESIPGNPERILNVSGA---LDAVSKAFGLIVR---RI 174
Query: 358 SEKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+++ S G + T + ++P SR+G +IGKGG+ I E++ + A +
Sbjct: 175 NDEPMGPSVPGSRAVTIKFIIPHSRMGSVIGKGGAKIKEIQEASGARL 222
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 27/36 (75%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
T ++ +P +GC+IGKGG+ I E+R+ +++ I+I+
Sbjct: 314 TQQIYIPNDLVGCIIGKGGAKINEIRQTSQSQIKIM 349
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 140/312 (44%), Gaps = 60/312 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGD-------EDSDGGHQVTAKLLVPSDQIGCVIGKG 158
++FK +I E+L D + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------SIFKAFSMII-EKLEEDISNSMTNSTATSKPPVTMRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR GAQ+++ D LP+ R+ + ++G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESAGAQVQVAGD-MLPNSTERA---ITVAGTPQSIIECVKQICIVMLESPPK 172
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIV---GIA-PLMGPYGGYKGDTAGDWSRSLYSA 274
I SGS P++ G A + G + + D ++ +
Sbjct: 173 -----GVTIPYRPKPSGS--------PVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 275 PRD------------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
P D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ +
Sbjct: 220 PFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP 279
Query: 323 STEGDDCLITVS 334
D +T++
Sbjct: 280 VEGSTDRQVTIT 291
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 73/177 (41%), Gaps = 46/177 (25%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSA-------- 95
R + P + GS+IG+GG +K++R +++++ G+ +P S ER +TV
Sbjct: 100 MRLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNSTERAITVAGTPQSIIECV 159
Query: 96 -----------------------SDETNAFEDGDKFVSPAQDA-----LFKVHDRVIAEE 127
S F G + Q A L K+H + +
Sbjct: 160 KQICIVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 219
Query: 128 LRGDEDSDGGHQV---------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
S+ G Q + +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 PFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 276
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ISNS ++S + T+ P+
Sbjct: 60 TLAGPTTSIFKAFSMIIEKLEED-----------ISNSMTNSTA----TSKPPV------ 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
++RLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TMRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 AGAQVQV 133
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + + + + F+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGNCPERIITLAGPTTSIFK-AF 72
Query: 344 SATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
S IE +L+ S + + T RL+VP S+ G LIGKGG I E+R A
Sbjct: 73 SMIIE---KLEEDISNSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRESAGA 129
Query: 402 NIRI 405
+++
Sbjct: 130 QVQV 133
>gi|332023471|gb|EGI63714.1| Far upstream element-binding protein 1 [Acromyrmex echinatior]
Length = 731
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 95/422 (22%), Positives = 180/422 (42%), Gaps = 91/422 (21%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFV 109
P + +G IIGRGGE + +L+ +T KI++ G ERV T+ + + N
Sbjct: 108 PDKMVGLIIGRGGEQITRLQTETGCKIQMAPESGGLPERVCTLTGSREAVNR-------- 159
Query: 110 SPAQDALFKVHDRVIAEELRGDED------SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
A++ + + ++ E GD + GH ++++P ++G +IGKGG+ ++
Sbjct: 160 --AKELVLSIVNQRSRSEGIGDMNMSGSGSGMMGHPGFVEIMIPGPKVGLIIGKGGETIK 217
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
++ ++GA++ ++++ + ++ ++I+G+ V+ A Q+ L +
Sbjct: 218 QLQEKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYAK-QLVYEL---------IA 263
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKE 283
I H G T T G Y D+ P +
Sbjct: 264 EKEIQMFHRGG---RGATDRT------------GNYSNDSG------FNHGP-----ANS 297
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSK--EF 338
+ ++ P A +G VIGKGG +I +I+ ESGA ++ EG CL++ + E
Sbjct: 298 DGVEVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREEGPGDRKCLLSGKHQAVEQ 357
Query: 339 FEDTLSATIEAVVRLQ------------PRCS------------EKIERDSGLIS--FTT 372
+ I++V+R PR + R G + T
Sbjct: 358 ARQRIQELIDSVMRRDDGRNNMGGRGSGPRGNGFGGNRNPNEYGTWDRRQGGPMQDKIET 417
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
VP+S+ G +IGKGG I ++ + T A+ L + N ++E++++ I G+ + +
Sbjct: 418 TFTVPSSKCGIIIGKGGETIKQINQQTGAHCE-LDRRNQ---SNENEKIFIIRGNPEQVE 473
Query: 433 DA 434
A
Sbjct: 474 HA 475
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 137/319 (42%), Gaps = 70/319 (21%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEE-----------------RVV 90
+ P K+G IIG+GGE +KQL+ + +K+ + + P E+ ++V
Sbjct: 199 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 258
Query: 91 TVYSASDETNAFEDG-----DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLL 145
A E F G D+ + + D+ F G +SDG ++L
Sbjct: 259 YELIAEKEIQMFHRGGRGATDRTGNYSNDSGFN----------HGPANSDG-----VEVL 303
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKA 204
VP +G VIGKGG +++ I++E+GA+++ + E P D +SG+ V++A
Sbjct: 304 VPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREEGP-----GDRKCLLSGKHQAVEQA 358
Query: 205 LCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG-DT 263
+I Q L+ S + + ++ G G P +GG + +
Sbjct: 359 RQRI-----------QELIDSVMRRDDGRN-NMGG-------RGSGPRGNGFGGNRNPNE 399
Query: 264 AGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD--S 321
G W R P D F++ P + G +IGKGG I QI Q++GA ++D +
Sbjct: 400 YGTWDRR-QGGPMQDKIETTFTV----PSSKCGIIIGKGGETIKQINQQTGAHCELDRRN 454
Query: 322 SSTEGDDCLITVSSKEFFE 340
S E + I + E E
Sbjct: 455 QSNENEKIFIIRGNPEQVE 473
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/277 (21%), Positives = 129/277 (46%), Gaps = 37/277 (13%)
Query: 198 ASVVKKALCQIASRLHDNPSRSQH----LLASAISNSHSSSGSLVGPTAATPIVGIAPLM 253
A+ +++A QIA+++ NP +Q+ L + +S + A P++GI
Sbjct: 20 AAALQRAK-QIAAKI--NPGGAQNNQDSKLKRPLEDSSEPEAKKMASLVADPLIGI--RG 74
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
GP G GD++G +R S P + +++ + P +G +IG+GG I +++ E+
Sbjct: 75 GPAGNSIGDSSGQGARPPSSNPLCSMCNEDIRV----PDKMVGLIIGRGGEQITRLQTET 130
Query: 314 GAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI------------ 361
G I++ S + + T++ + + ++V + R SE I
Sbjct: 131 GCKIQMAPESGGLPERVCTLTGSREAVNRAKELVLSIVNQRSR-SEGIGDMNMSGSGSGM 189
Query: 362 ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEM 421
G + +++P ++G +IGKGG I +++ + A + ++ + + E ++
Sbjct: 190 MGHPGFV----EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQE----GPSQEQEKP 241
Query: 422 VQISGD---LDLAKDALIQVMTRLRANLFDREGAVST 455
++I+GD ++ AK + +++ +F R G +T
Sbjct: 242 LRITGDPQKVEYAKQLVYELIAEKEIQMFHRGGRGAT 278
>gi|348537887|ref|XP_003456424.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Oreochromis
niloticus]
Length = 496
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 47 KRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 98
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV- 140
PG+ ERV + + N D F++ + + + + + + +V
Sbjct: 99 YPGTTERVCLIQGTVEALNGVHD---FIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVK 155
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V ISGE
Sbjct: 156 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQ 212
Query: 201 VKKALCQIASRLHDNPSRSQHL 222
+KA+ I ++ ++P S L
Sbjct: 213 NRKAVEIIVQKIQEDPQSSSCL 234
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 90/177 (50%), Gaps = 23/177 (12%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLI--TVSS 335
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI TV +
Sbjct: 56 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 115
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIG 386
D ++ VR P+ ++K E S L TT +L+VP S G +IG
Sbjct: 116 LNGVHDFIAEK----VREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIG 171
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
KGG+ + + + A +++ K P+ + + +V ISG+ + + A+ ++ +++
Sbjct: 172 KGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEIIVQKIQ 225
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 383 ATNGYLSAASPLVASSLLATEKLAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGA 442
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 443 RIQISKKGEFIPGTRNRK---VTITGSQAATQAAQYLISQRI 481
>gi|302766557|ref|XP_002966699.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
gi|300166119|gb|EFJ32726.1| hypothetical protein SELMODRAFT_85231 [Selaginella moellendorffii]
Length = 324
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 146/347 (42%), Gaps = 82/347 (23%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVY-S 94
G T R+L GS+IG+GG + + + ++I++ E PG+ +RV + S
Sbjct: 11 GETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGTSDRVAVLSGS 70
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+D AF+ +I ++ D++ D + KLLVP G +
Sbjct: 71 LADVLTAFQ-------------------LIISKIIKDDNQDDTKSIQVKLLVPKTVCGAI 111
Query: 155 IGKGGQIVQNIRSETGAQIRI-LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
IGKGG ++ ++ A I++ +D+ LP D +V I G + KA+ I ++L
Sbjct: 112 IGKGGSNIKKFVEDSQASIKLSSQDQLLPGVI---DRIVTIGGNVDQIIKAVTLILTKLT 168
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDW-SRSLY 272
+ S ++ T +TP+V Y G + R +Y
Sbjct: 169 EESSYTE--------------------TTSTPLV-----------YPGTRPTSFIVRCVY 197
Query: 273 SA----------------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
A P + + S+ + P +IG ++G+ G + +++Q SGA
Sbjct: 198 HASPGLQNLRRNGPGPPMPVAYVGALTSSVTIGIPDEHIGFILGRAGKTLQELQQSSGAK 257
Query: 317 IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
IKV S GD V+ E+ + T+ + EA+ Q ++K+++
Sbjct: 258 IKV---SDRGD----FVTGTEYRKVTMIGSGEAIQAAQFLLTQKVQQ 297
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 98/218 (44%), Gaps = 33/218 (15%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT-- 342
+LR + G VIGKGG+ I+ + +SGA I++ + E+F T
Sbjct: 16 NLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRN-------------HEYFPGTSD 62
Query: 343 ----LSATIEAVVRLQPRCSEKIERDSG---LISFTTRLLVPTSRIGCLIGKGGSIITEM 395
LS ++ V+ KI +D S +LLVP + G +IGKGGS I +
Sbjct: 63 RVAVLSGSLADVLTAFQLIISKIIKDDNQDDTKSIQVKLLVPKTVCGAIIGKGGSNIKKF 122
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
++A+I++ ++ L + D +V I G++D A+ ++T+L E +
Sbjct: 123 VEDSQASIKLSSQDQL--LPGVIDRIVTIGGNVDQIIKAVTLILTKLTEESSYTETTSTP 180
Query: 456 FV-----PVLPYIPVSENGSDGLNYESRDSKRHGRGPP 488
V P + + S GL ++ +R+G GPP
Sbjct: 181 LVYPGTRPTSFIVRCVYHASPGL----QNLRRNGPGPP 214
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCA 185
E E++ G + LV + G VIGKGG + + ++++GA+I++ ++ E+ P
Sbjct: 2 EFLFAENNAGETTTNLRFLVTNTAAGSVIGKGGSTISDFQAQSGARIQLSRNHEYFPGT- 60
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
SD + +SG + V A I S++
Sbjct: 61 --SDRVAVLSGSLADVLTAFQLIISKI 85
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 136/308 (44%), Gaps = 52/308 (16%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R ++ +++ I E GS ER++T+ ++D F
Sbjct: 18 LRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE---GSCPERIITITGSTD--CVFR 72
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
K+ + + A G + VT +L++P+ Q G +IGKGG ++
Sbjct: 73 AFTMIT-------HKLEEDLAALVANGTISTK--PPVTLRLVIPASQCGSLIGKGGAKIK 123
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
IR TGAQI++ D LP+ R V ISG V + + I + + ++P + +
Sbjct: 124 EIRESTGAQIQVAGD-LLPNSTERG---VTISGNQDSVIQCVKLICTVILESPPKGATI- 178
Query: 224 ASAISNSHSSSGSLVG--------PTAATPIVGIA----------PLMGPYGGYKGDTAG 265
S S + L+ A P+ +A L YG + A
Sbjct: 179 --PYRPSPSPAAVLIAGNQLFDASEFATHPMYSVAQGGLDLQQAYTLQNQYGIPHSELAK 236
Query: 266 DWSRSLYSA------------PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
S+ P S+ + S L+ P IG +IG+ G IN+IRQ S
Sbjct: 237 LHQLSMQQGLNPIAQPASTVIPAGMDSNSQTSQELLIPNDLIGSIIGRQGTKINEIRQVS 296
Query: 314 GAAIKVDS 321
GA IK+ S
Sbjct: 297 GAQIKIGS 304
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 84/166 (50%), Gaps = 30/166 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LRL+ +G +IGK G + +IR+ES A + + S + +IT++
Sbjct: 16 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSC--PERIITIT--------- 64
Query: 344 SATIEAVVRLQPRCSEKIERD------SGLIS----FTTRLLVPTSRIGCLIGKGGSIIT 393
+ + V R + K+E D +G IS T RL++P S+ G LIGKGG+ I
Sbjct: 65 -GSTDCVFRAFTMITHKLEEDLAALVANGTISTKPPVTLRLVIPASQCGSLIGKGGAKIK 123
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
E+R T A I++ + LP + + V ISG+ +D++IQ +
Sbjct: 124 EIRESTGAQIQVA-GDLLP---NSTERGVTISGN----QDSVIQCV 161
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 60/183 (32%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G +T +LL+ ++G +IGK G+ V+ IR E+ A++ I + SC R ++ I+G
Sbjct: 13 GVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG----SCPER---IITITG 65
Query: 197 EASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY 256
V +A I +L ++ LA+ ++N G + P V
Sbjct: 66 STDCVFRAFTMITHKLEED-------LAALVAN---------GTISTKPPV--------- 100
Query: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
+LRLV P + G +IGKGGA I +IR+ +GA
Sbjct: 101 ----------------------------TLRLVIPASQCGSLIGKGGAKIKEIRESTGAQ 132
Query: 317 IKV 319
I+V
Sbjct: 133 IQV 135
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 140/345 (40%), Gaps = 78/345 (22%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 78
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 79 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 128
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL------ 212
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 129 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 187
Query: 213 -------HDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
PS S + A + S H++ + P P + + G
Sbjct: 188 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ 247
Query: 256 YG--------------------------GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLV 289
Y G+ G + Y A D S++ S L
Sbjct: 248 YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDA-SAQTTSHELT 306
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
P IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 307 IPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 351
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 19 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 71
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 72 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 105
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 106 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 138
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 139 TGAQVQV 145
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 73
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 74 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 133
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 134 EIRESTGAQVQV 145
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 295 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 349
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 350 ITGSAASISLAQYLINVRL 368
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 36/225 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVPVLPYIPVSENG----SDGLNYESRDSKRHGRGPPYGGY 492
A + P PV G +D L + + + PP Y
Sbjct: 206 ATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAY 250
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 317 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 351
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 132/297 (44%), Gaps = 53/297 (17%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + GS ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-------- 222
I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 223 ---LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGGYK----GDTAGD 266
+ A + + G+ PT A P M P GG AG
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMTPASTGGINHTALAALAGS 253
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
R+ +A R E + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 254 QLRT-ANANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 303
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPD--SV 325
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 326 ALAQYLINMRISM 338
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 36/225 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVPVLPYIPVSENG----SDGLNYESRDSKRHGRGPPYGGY 492
A + P PV G +D L + + + PP Y
Sbjct: 206 ATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAY 250
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 317 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 351
>gi|189528952|ref|XP_001923490.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Danio rerio]
Length = 496
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 20/203 (9%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 47 KRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 98
Query: 82 VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ 139
PG+ ERV + + N D +K Q A ++ + + D
Sbjct: 99 YPGTTERVCLIQGTVEALNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPD----RV 154
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V ISGE
Sbjct: 155 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PDGINLQERVVTISGEPE 211
Query: 200 VVKKALCQIASRLHDNPSRSQHL 222
+KA+ I ++ ++P S L
Sbjct: 212 QNRKAVEIIVQKIQEDPQSSSCL 234
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 23/177 (12%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLI--TVSS 335
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI TV +
Sbjct: 56 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 115
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIG 386
D ++ VR P+ ++K E S L TT +L+VP S G +IG
Sbjct: 116 LNNVHDFIAEK----VREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIG 171
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
KGG+ + + + A +++ K P + + +V ISG+ + + A+ ++ +++
Sbjct: 172 KGGATVKAVMEQSGAWVQLSQK---PDGINLQERVVTISGEPEQNRKAVEIIVQKIQ 225
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 36/225 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 452 AVSTFVPVLPYIPVSENG----SDGLNYESRDSKRHGRGPPYGGY 492
A + P PV G +D L + + + PP Y
Sbjct: 206 ATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAY 250
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 317 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 351
>gi|410914634|ref|XP_003970792.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 501
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 105/222 (47%), Gaps = 20/222 (9%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N+ ++ +T + G KR TG++ + F+ + L P GSIIG+GG+ +
Sbjct: 34 NADSRKRPLETPEEEAGCTKRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTI 85
Query: 66 KQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVH 120
QL+ +T + I++ ++ PG+ ERV + + N + +K Q A
Sbjct: 86 VQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSAQKPEP 145
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
++ + + D AK++VP+ G +IGKGG V+ + ++GA +++ +
Sbjct: 146 VSILQPQTTVNPD----RVKQAKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK-- 199
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
P + +V ISGE +KA+ I ++ ++P S L
Sbjct: 200 -PEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCL 240
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 62 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 121
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I VR P+ ++K E S L TT +++VP S G +IGKG
Sbjct: 122 L--NGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKIIVPNSTAGLIIGKG 179
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V ISG+ + + A+ ++ +++
Sbjct: 180 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEIIVQKIQ 231
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 388 ASNGYLNASSPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 447
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 448 RIQISKKGEFIPGTRNRK---VTITGSPAATQAAQYLISQRI 486
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 132/297 (44%), Gaps = 53/297 (17%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-------- 222
I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 223 ---LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGGYK----GDTAGD 266
+ A + + G+ PT A P M P GG AG
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMTPASTGGINHTALAALAGS 253
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
R+ +A R E + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 254 QLRT-ANANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 303
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQV-ASEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVAL 327
Query: 434 A--LIQVMTRL-RANLFDR 449
A LI + L +ANL D+
Sbjct: 328 AQYLINMSVELQKANLQDQ 346
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 97 DE 98
++
Sbjct: 162 EQ 163
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|392558575|gb|EIW51762.1| hypothetical protein TRAVEDRAFT_156921 [Trametes versicolor
FP-101664 SS1]
Length = 378
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 124/266 (46%), Gaps = 27/266 (10%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+ G V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 77 IIGKAGSHVNEIREKSGARVVVSESIPGNPERILNVSGPLD--------------AVSKA 122
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 123 FGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQEASGARLN-A 181
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP R L+ +SG A + A I + L + R S+ S + S
Sbjct: 182 SETMLPGSTER---LLSVSGVADAIHIATYYIGNILIEANERMPTTNNSSYRPSSYQASS 238
Query: 237 LVGPTAATPIVGIAPLMGPY---GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVA 293
P ++TP G P G GGY + ++ + +AP S+ + ++ P
Sbjct: 239 --APPSSTP-RGRPPYSGSSYVPGGYGQN---PYAPAAPAAPAPGPPSQLQTQQIYIPND 292
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKV 319
+G +IGKGGA IN+IR S + IK+
Sbjct: 293 LVGCIIGKGGAKINEIRHMSASQIKI 318
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 103/237 (43%), Gaps = 49/237 (20%)
Query: 26 RRYTGDDRDQ-FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-P 83
RR + D+ + G +++ P ++GS+IG+GG +K+++ + +++ ET+ P
Sbjct: 128 RRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQEASGARLNASETMLP 187
Query: 84 GSEERVVTVYSASDETN--AFEDGDKFV-----------SPAQDALFKVHDRVIAEELRG 130
GS ER+++V +D + + G+ + S + + ++ + RG
Sbjct: 188 GSTERLLSVSGVADAIHIATYYIGNILIEANERMPTTNNSSYRPSSYQASSAPPSSTPRG 247
Query: 131 DEDSDGGHQV--------------------------TAKLLVPSDQIGCVIGKGGQIVQN 164
G V T ++ +P+D +GC+IGKGG +
Sbjct: 248 RPPYSGSSYVPGGYGQNPYAPAAPAAPAPGPPSQLQTQQIYIPNDLVGCIIGKGGAKINE 307
Query: 165 IRSETGAQIRILK--------DEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
IR + +QI+I++ + + LV I+G+ + ++ A+ + SRL
Sbjct: 308 IRHMSASQIKIMEPGAVGVGLNGAAAPAGSEGERLVVITGQPANIQMAVQLLYSRLE 364
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+GD + S + S+ + + +R + + +IGK G+ +N+IR++SGA + V
Sbjct: 39 QGDGSATTSGAPSSSGQPTPPAANIHMRCLIVTQDASIIIGKAGSHVNEIREKSGARVVV 98
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS-EKIERDS--GLISFTTRLLV 376
S + ++ VS D +S +VR R + E ++ S G + T + ++
Sbjct: 99 SESIPGNPERILNVSGP---LDAVSKAFGLIVR---RINDEPFDKPSVPGSRAVTIKFMI 152
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANI 403
P SR+G +IGKGG+ I E++ + A +
Sbjct: 153 PNSRMGSVIGKGGTKIKEIQEASGARL 179
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 26/36 (72%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
T ++ +P +GC+IGKGG+ I E+R ++ + I+I+
Sbjct: 284 TQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIM 319
>gi|45384194|ref|NP_990402.1| insulin-like growth factor 2 mRNA-binding protein 1 [Gallus gallus]
gi|82227598|sp|O42254.1|IF2B1_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1; AltName: Full=Zip code-binding protein
1; Short=ZBP-1; Short=Zipcode-binding protein 1
gi|2570921|gb|AAB82295.1| zipcode-binding protein [Gallus gallus]
Length = 576
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 165/382 (43%), Gaps = 55/382 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++++S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A ++I E ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 253 CSAA------------------CKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGK 294
Query: 158 GGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G+ ++ + +T +I I L+D L + + + G KA +I ++ +
Sbjct: 295 EGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCKAEQEIMKKVRE- 349
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
++ +A+ SH G + P A P +G S + P
Sbjct: 350 --AYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPP-----SSVSGAAPYSSFMPP 402
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ ++ + P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 403 EQE------TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV-- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 455 -------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGK 507
Query: 391 IITEMRRLTKANIRILPKENLP 412
+ E++ LT A + ++P++ P
Sbjct: 508 TVNELQNLTAAEV-VVPRDQTP 528
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 52 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 103
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 104 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 158
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 159 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 207
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 41 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 93
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 94 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 133
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 134 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 160
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 161 STGAQVQV 168
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 49 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 96
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 97 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 156
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 157 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 208
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 209 AT----IPYRP 215
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 297 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 331
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 134/330 (40%), Gaps = 79/330 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 78
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 79 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 128
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL------ 212
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 129 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 187
Query: 213 -------HDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
PS S + A + S H++ + P P + + G
Sbjct: 188 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ 247
Query: 256 YG--------------------------GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLV 289
Y G+ G + Y A D +S + + L
Sbjct: 248 YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWASLD--ASTQTTHELT 305
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 306 IPNNLIGCIIGRQGANINEIRQMSGAQIKI 335
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 19 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 71
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 72 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 105
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 106 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 138
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 139 TGAQVQV 145
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 26 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 73
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 74 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 133
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 134 EIRESTGAQVQV 145
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
D Q T +L +P++ IGC+IG+ G + IR +GAQI+I S V I
Sbjct: 295 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VEGSSGRQVTI 349
Query: 195 SGEASVVKKALCQIASRL 212
+G A+ + A I +RL
Sbjct: 350 TGSAASISLAQYLINARL 367
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 116 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 165
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 166 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 215
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 216 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 271
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 272 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 331
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 332 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 389
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 390 IGCIIGRQGANINEIRQMSGAQIKI 414
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
DE+++ +T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P +
Sbjct: 104 DEENELNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ER 156
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
++ ++G + + KA I +L ++ + S+++NS TAA
Sbjct: 157 IITLTGPTNAIFKAFAMIIDKLEED-------INSSMTNS----------TAA------- 192
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
S +LRLV P G +IGKGG I +IR
Sbjct: 193 -----------------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIR 223
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 224 ESTGAQVQV 232
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 31/193 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 113 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 160
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 161 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 220
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR-EGA 452
E+R T A +++ + LP + + + I+G + + Q+ + L +G
Sbjct: 221 EIRESTGAQVQVA-GDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGR 276
Query: 453 VSTFVPVLPYIPV 465
V T +PY P+
Sbjct: 277 VMT----IPYQPM 285
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
D Q T +L +P++ IGC+IG+ G + IR +GAQI+I S V I
Sbjct: 374 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANP-----VEGSSGRQVTI 428
Query: 195 SGEASVVKKALCQIASRL 212
+G A+ + A I +RL
Sbjct: 429 TGSAASISLAQYLINARL 446
>gi|444513545|gb|ELV10391.1| Poly(rC)-binding protein 4 [Tupaia chinensis]
Length = 399
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 131/279 (46%), Gaps = 50/279 (17%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGSNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS-RSQH- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + + S + Q+
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILEGFSVQGQYG 181
Query: 222 -LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS 280
+ + ++ SG V P A+ +V P D S
Sbjct: 182 AVTPAEVTKLQQLSGHAV-PFASPSVV---------------------------PGLDPS 213
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
++ S + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 214 TQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 252
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 89/304 (29%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPANG-------------------- 94
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
++S +LRLV P + G +IGK G I +IR
Sbjct: 95 --------------------------SNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKVD----SSSTE------GDDCLITVSSKEFFEDTL----------SATIEAV 350
+ +GA ++V +STE G I + ++ L + T V
Sbjct: 129 ETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILEGFSVQGQYGAVTPAEV 188
Query: 351 VRLQ-------PRCSEKIE--RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
+LQ P S + D + + LVP IGC+IG+ GS I+E+R+++ A
Sbjct: 189 TKLQQLSGHAVPFASPSVVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGA 248
Query: 402 NIRI 405
+I+I
Sbjct: 249 HIKI 252
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 80/170 (47%), Gaps = 14/170 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGSNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
T A +++ + LP + + V +SG DA+I + ++ A + +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILE 172
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 206 AT----IPYRP 212
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 317 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 351
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGTPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|30354044|gb|AAH51679.1| Insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 175/391 (44%), Gaps = 55/391 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
++ K+ ++ +E + + +DG V K+L ++ +G +IGK
Sbjct: 253 CSS--------------ACKMILEIMHKEAKDTKTADG---VPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
G+ ++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE-- 349
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
++ +A+ SH G + AA + + P A +S S AP
Sbjct: 350 -AYENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPE 404
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
++ +++ P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 405 QEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV--- 455
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 456 ------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKT 509
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + ++P++ P E+D+++
Sbjct: 510 VNELQNLTAAEV-VVPRDQTP---DENDQVI 536
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 38/226 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVPVLPYIPVSENG----SDGLNYESRDSKRHGRGPPYGGY 492
GA + P PV G +D L + + + PP Y
Sbjct: 173 GATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAY 218
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 174 AT----IPYRP 180
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 99/226 (43%), Gaps = 38/226 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--E 450
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 451 GAVSTFVPVLPYIPVSENG----SDGLNYESRDSKRHGRGPPYGGY 492
GA + P PV G +D L + + + PP Y
Sbjct: 173 GATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAY 218
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
>gi|431913482|gb|ELK15157.1| Poly(rC)-binding protein 4 [Pteropus alecto]
Length = 403
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 139/303 (45%), Gaps = 43/303 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + + G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCSATANGGNISR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH-- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 222 ----------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
LL++ S V P T + ++ P+ D
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPGMVPGLD----- 236
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +
Sbjct: 237 ---PGAQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHV 289
Query: 332 TVS 334
T++
Sbjct: 290 TIT 292
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRR 397
+ ++ A + CS + G IS T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 ---AVSMIAFKLDEDLCSAT--ANGGNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVST 455
T A +++ + LP + + V +SG DA+I + ++ A + + +GA
Sbjct: 130 TTGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIP 181
Query: 456 FVPVL 460
+ P L
Sbjct: 182 YHPSL 186
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R + I+G +
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER---ITTITGSTA 70
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
V A+ IA +L ++ L SA +N GG
Sbjct: 71 AVFHAVSMIAFKLDED-------LCSATAN---------------------------GG- 95
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
++S +LRLV P + G +IGK G I +IR+ +GA ++V
Sbjct: 96 ------------------NISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQV 137
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 173 GAT----IPYRP 180
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
>gi|432887611|ref|XP_004074938.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 562
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/379 (20%), Positives = 153/379 (40%), Gaps = 87/379 (22%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P + +G IIG+GGE + +++ ++ KI+I G +R T+ + +
Sbjct: 83 TTEDFKVPDKMVGFIIGKGGEQISRIQQESGCKIQIASDSGGMLDRPCTLTGSPEN---I 139
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELR------GDEDSDGGHQVTAKLLVPSDQIGCVIG 156
E + +S I E+ R D D +G Q ++L+P++++G VIG
Sbjct: 140 EQAKRLLSE------------IIEQCRYGPGFHNDMDGNGSIQ---QMLIPANKVGLVIG 184
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG+ ++ ++ TG Q+ +++D+ +P+ A D+ ++I+G+ V++A + + D
Sbjct: 185 KGGETIKQLQERTGVQMMMIQDDPMPTGA---DKPLRITGDPLKVQQARELVVKLIRDKD 241
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+ GS +G T+
Sbjct: 242 Q-------GDFRTGRAEFGSKMGGTS---------------------------------- 260
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
L +V P +G +IG+ G +I +I+ ++G I+ D + V +
Sbjct: 261 ---------LDVVVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDDGISPDRVAQVMGQ 311
Query: 337 -EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIG 386
E + E V Q R + G + T VP + G +IG
Sbjct: 312 PEHCHHAVHLINELVQTAQERDGYGVMGRRGRVDCNTGGAGGLQEVTYAVPADKCGLVIG 371
Query: 387 KGGSIITEMRRLTKANIRI 405
KGG I ++ ++A++ +
Sbjct: 372 KGGETIKNIKEQSRAHVEL 390
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 16/153 (10%)
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSK 336
L++++F + P +G +IGKGG I++I+QESG I++ DS C +T S +
Sbjct: 82 LTTEDFKV----PDKMVGFIIGKGGEQISRIQQESGCKIQIASDSGGMLDRPCTLTGSPE 137
Query: 337 --EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
E + LS IE Q R D ++L+P +++G +IGKGG I +
Sbjct: 138 NIEQAKRLLSEIIE-----QCRYGPGFHNDMDGNGSIQQMLIPANKVGLVIGKGGETIKQ 192
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
++ T + ++ + +P A D+ ++I+GD
Sbjct: 193 LQERTGVQMMMIQDDPMPTGA---DKPLRITGD 222
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 81/171 (47%), Gaps = 15/171 (8%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN-AFEDGD 106
+ P +G IIGR GE++K+++ D +I+ + S +RV V + + A +
Sbjct: 264 VVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKQDDGISPDRVAQVMGQPEHCHHAVHLIN 323
Query: 107 KFVSPAQDALFKVHDRVIAEELRGDEDSDGG-----HQVTAKLLVPSDQIGCVIGKGGQI 161
+ V AQ+ D RG D + G +VT VP+D+ G VIGKGG+
Sbjct: 324 ELVQTAQE-----RDGYGVMGRRGRVDCNTGGAGGLQEVT--YAVPADKCGLVIGKGGET 376
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
++NI+ ++ A + + ++ P + + I G ++KA I R+
Sbjct: 377 IKNIKEQSRAHVELQRNP--PPSTDPNVRIFSIRGTPQQLEKARQLIDERI 425
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 131/302 (43%), Gaps = 57/302 (18%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-------- 222
I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 223 ---LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGGYK---------G 261
+ A + + G+ PT A P M P GG
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTGSAPAALA 253
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKV 319
AG R+ A R E + V+N IG +IGKGG I +IRQ SGA I++
Sbjct: 254 ALAGSQLRTANPANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRI 307
Query: 320 DS 321
+
Sbjct: 308 SN 309
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI +C
Sbjct: 259 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI------SNCEE 312
Query: 187 R----SDELVQISGEASVVKKALCQIASRL 212
R +D + ISG V A I R+
Sbjct: 313 REGGNTDRTITISGNPDSVALAQYLINMRI 342
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 276 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSV-- 331
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 332 ALAQYLINMRISM 344
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 174 AT----IPYRP 180
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 17/167 (10%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D F +
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI--------FKAF 72
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ IR TGA
Sbjct: 73 AMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 129
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
Q+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 130 QVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 36/225 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVPVLPYIPVSENG----SDGLNYESRDSKRHGRGPPYGGY 492
A + P PV G +D L + + + PP Y
Sbjct: 174 ATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAY 218
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 16 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 65
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 66 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 115
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 116 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 171
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 172 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 231
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 232 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 289
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 290 IGCIIGRQGANINEIRQMSGAQIKI 314
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 65
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 66 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 92
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 93 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 132
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 60
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 61 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 120
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 121 EIRESTGAQVQV 132
>gi|195394077|ref|XP_002055672.1| GJ18657 [Drosophila virilis]
gi|194150182|gb|EDW65873.1| GJ18657 [Drosophila virilis]
Length = 650
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 97/426 (22%), Positives = 189/426 (44%), Gaps = 77/426 (18%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 119 NQRRSIRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 178
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + I E ++ + S
Sbjct: 179 HRKENV-GSLEKSITIYGNPENCTNAC-------------------KRILEVMQQEALST 218
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 219 NKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 276
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 277 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 320
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +D+ + L P +G +IG
Sbjct: 321 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPAFPNDMQETTY---LYIPNNAVGAIIG 377
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 378 TKGSHIRSIMRFSSASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 432
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 433 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 490
Query: 415 ASEDDE 420
+ D+E
Sbjct: 491 SGGDEE 496
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 360 QETTYLYI-PNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGT 418
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 419 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 461
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 462 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLS 521
Query: 214 DNP 216
NP
Sbjct: 522 TNP 524
>gi|126336339|ref|XP_001367908.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Monodelphis
domestica]
Length = 410
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 43/281 (15%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A ++
Sbjct: 27 KEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTGAVFHAVSMIA 80
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
FK+ + + G S VT +L++P+ Q G +IGK G ++ IR TG
Sbjct: 81 ------FKLDEDLCTGPPNGGSISK--PPVTLRLVIPASQCGSLIGKAGTKIKEIRETTG 132
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS 230
AQ+++ D LP+ R+ V +SG + + QI + + ++P + +
Sbjct: 133 AQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATI-------P 181
Query: 231 HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR------------SLYSAPRDD 278
+ S SL T ++ G Y T + S+ S P D
Sbjct: 182 YHPSLSL-----GTVLLSANQGFSVQGQYGTVTPAEVSKLQQLSGHPVPFASPSVVPGLD 236
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S++ S + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 237 PSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 88/188 (46%), Gaps = 24/188 (12%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTGAVFH 74
Query: 341 DTLSATIEAVVRLQPRCSEKI---ERDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITE 394
AV + + E + + G IS T RL++P S+ G LIGK G+ I E
Sbjct: 75 --------AVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKE 126
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGA 452
+R T A +++ + LP + + V +SG DA+I + ++ A + + +GA
Sbjct: 127 IRETTGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGA 178
Query: 453 VSTFVPVL 460
+ P L
Sbjct: 179 TIPYHPSL 186
Score = 45.8 bits (107), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 77/189 (40%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++++ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G V A+ IA +L ++ GP
Sbjct: 62 ITTITGSTGAVFHAVSMIAFKLDED--------------------LCTGP---------- 91
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
P GG +S +LRLV P + G +IGK G I +IR
Sbjct: 92 ----PNGG-------------------SISKPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 44/190 (23%)
Query: 29 TGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEE 87
TG I P T+ R + P + GS+IG+ G +K++R T +++++ G+ +P S E
Sbjct: 89 TGPPNGGSISKPPVTL-RLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTE 147
Query: 88 RVV---------------------------------------TVYSASDETNAFEDGDKF 108
R V TV ++++ + +
Sbjct: 148 RAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGT 207
Query: 109 VSPAQDALFKV---HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
V+PA+ + + H A + + LVP+D IGCVIG+ G + I
Sbjct: 208 VTPAEVSKLQQLSGHPVPFASPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEI 267
Query: 166 RSETGAQIRI 175
R +GA I+I
Sbjct: 268 RQMSGAHIKI 277
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 28/218 (12%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GEIVK+ R ++ +KI I + ER+VT+ S T A +
Sbjct: 22 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTI---SGSTEAIYKAFSLIC- 75
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
KV + + + + + G +T +L+VP+ Q G +IGKGG ++ IR TGA
Sbjct: 76 -----TKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGA 130
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------------- 218
QI++ D LP R+ V ++G + + + I + + ++P +
Sbjct: 131 QIQVASDV-LPQSTERA---VTLTGTRDSITQCIFHICAVMVESPPKGVTIPYRAKPQMG 186
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY 256
+ +LA + + +S+GS G T +VG P P
Sbjct: 187 APVILAGGQAFTLASAGSAAGCDVGTMMVGGGPYNAPM 224
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 69/132 (52%), Gaps = 5/132 (3%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+DD S+ +LRL+ +G +IGK G I+ + R+ESGA I + S I+ S+
Sbjct: 6 KDD-SNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTISGST 64
Query: 336 KEFFE--DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ ++ + +E + +Q + G T RL+VP S+ G LIGKGG+ I
Sbjct: 65 EAIYKAFSLICTKVEEFIEMQ--NGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIK 122
Query: 394 EMRRLTKANIRI 405
E+R T A I++
Sbjct: 123 EIREATGAQIQV 134
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 75/187 (40%), Gaps = 58/187 (31%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V I
Sbjct: 8 DSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIVTI 60
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
SG + KA I +++ + G T AT I
Sbjct: 61 SGSTEAIYKAFSLICTKVEEFIEMQN------------------GKTGATAI-------- 94
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
G +L RL+ P + G +IGKGG I +IR+ +G
Sbjct: 95 ----------GKCGMTL---------------RLIVPASQCGSLIGKGGNKIKEIREATG 129
Query: 315 AAIKVDS 321
A I+V S
Sbjct: 130 AQIQVAS 136
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
GG Q T ++ VP+D IGC+IGKGG + IR +GA IRI E A +D + I+
Sbjct: 310 GGGQQTHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSA-STDRTITIT 368
Query: 196 GEASVVKKA 204
G V A
Sbjct: 369 GNPDSVALA 377
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD- 429
T + VP IGC+IGKGG+ I E+R+++ A IRI E+ AS D + I+G+ D
Sbjct: 315 THEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSAS-TDRTITITGNPDS 373
Query: 430 --LAKDALIQVMTRLRANLFDRE 450
LA+ + + RA++ E
Sbjct: 374 VALAQYLINMSLEIQRASMLQSE 396
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
IG R + P + GS+IG+GG +K++R T ++I++ + +P S ER VT+
Sbjct: 94 IGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGAQIQVASDVLPQSTERAVTLTGTR 153
Query: 97 D 97
D
Sbjct: 154 D 154
>gi|386771588|ref|NP_001246874.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
gi|383292064|gb|AFH04545.1| mushroom-body expressed, isoform I [Drosophila melanogaster]
Length = 539
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 133/309 (43%), Gaps = 63/309 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFED 104
R + +++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV------------ 71
Query: 105 GDKFVSPAQDALFKVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
S +A+F + + E D G Q+ +L+VP+ Q G +IGK G ++
Sbjct: 72 -----SGTTNAIFSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIK 126
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL- 222
IR TG I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 127 EIRQTTGCSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIP 182
Query: 223 ----------LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGGYK--- 260
+ A + + G+ PT A P M P GG
Sbjct: 183 YRPKPQVTGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTG 242
Query: 261 ------GDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQE 312
AG R+ A R E + V+N IG +IGKGG I +IRQ
Sbjct: 243 SAPAALAALAGSQLRTANPANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQI 296
Query: 313 SGAAIKVDS 321
SGA I++ +
Sbjct: 297 SGAMIRISN 305
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S + ++TVS
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSC--PERIVTVSG----- 73
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
T +A A + + E D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 74 -TTNAIFSAFTLITKKFEEF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 130
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 131 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 167
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 272 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVAL 329
Query: 434 A--LIQVMTRL-RANLFDR 449
A LI + L +ANL ++
Sbjct: 330 AQYLINMSVELQKANLLEQ 348
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI E
Sbjct: 255 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGG-- 312
Query: 187 RSDELVQISGEASVVKKALCQ 207
+D + ISG V AL Q
Sbjct: 313 NTDRTITISGNPDSV--ALAQ 331
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
Score = 39.3 bits (90), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 98 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 157
Query: 97 DE 98
++
Sbjct: 158 EQ 159
>gi|426199945|gb|EKV49869.1| hypothetical protein AGABI2DRAFT_63586 [Agaricus bisporus var.
bisporus H97]
Length = 365
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 37/263 (14%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+GG V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 78 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLD--------------AVSKA 123
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 124 FGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLN-A 182
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP R ++ ++G A + A I + L + +Q + S ++++ S
Sbjct: 183 SEGMLPGSTER---VLSVAGVADAIHIATYYIGTILIE----AQERMPSTSNSTYRPSSQ 235
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
PT GG G + Y P + + + ++ P +G
Sbjct: 236 PRRPT--------------QGGGSSYVPGYSHHAPYGPPHNPPQQLQ-TQQIYIPNDLVG 280
Query: 297 GVIGKGGAIINQIRQESGAAIKV 319
+IGKGG+ IN+IR S + IK+
Sbjct: 281 CIIGKGGSKINEIRHMSASQIKI 303
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 32/207 (15%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSA 95
+ G +++ P ++GS+IG+GG +K+++ + +K+ E +PGS ERV++V
Sbjct: 141 VPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGV 200
Query: 96 SDETN--AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG---------HQV---- 140
+D + + G + AQ+ + + + + GG H
Sbjct: 201 ADAIHIATYYIGTILIE-AQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGP 259
Query: 141 ---------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL---PSCALRS 188
T ++ +P+D +GC+IGKGG + IR + +QI+I++ P+ A
Sbjct: 260 PHNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGG 319
Query: 189 DE---LVQISGEASVVKKALCQIASRL 212
E LV I+G+ + ++ A+ + RL
Sbjct: 320 SEGERLVVITGQPANIQMAVQLLYHRL 346
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 7/147 (4%)
Query: 257 GGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
G G + G+ S + + P S +R + + +IGKGG+ +N+IR++SGA
Sbjct: 41 GDKAGSSYGEASTTASAVP----PSANIHMRCLIVTQDASIIIGKGGSHVNEIREKSGAR 96
Query: 317 IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLV 376
+ V S + ++ VS D +S +VR + G + T + ++
Sbjct: 97 VMVSESIPGNPERILNVSGP---LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMI 153
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANI 403
P SR+G +IGKGGS I E++ + A +
Sbjct: 154 PNSRMGSVIGKGGSKIKEIQDASGAKL 180
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 52/214 (24%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSS---- 335
S+ +++ + P + +G VIGKGG+ I +I+ SGA + G + +++V+
Sbjct: 144 SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADA 203
Query: 336 ---KEFFEDTLSATIEAVVRLQPRCSEKIERDS---------GLISF------------- 370
++ T+ IEA R+ P S R S G S+
Sbjct: 204 IHIATYYIGTI--LIEAQERM-PSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPP 260
Query: 371 --------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK------ENLPKIAS 416
T ++ +P +GC+IGKGGS I E+R ++ + I+I+ N S
Sbjct: 261 HNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGS 320
Query: 417 EDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
E + +V I+G + A IQ+ +L + ++E
Sbjct: 321 EGERLVVITG-----QPANIQMAVQLLYHRLEQE 349
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+ + L+ + +IGKGG V IR ++GA R++ E +P R ++ +SG
Sbjct: 64 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGA--RVMVSESIPGNPER---ILNVSGPLD 118
Query: 200 VVKKALCQIASRLHDNP 216
V KA I R++D P
Sbjct: 119 AVSKAFGLIVRRINDEP 135
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
R L+ T +IGKGGS + E+R K+ R++ E++P + ++ +SG LD
Sbjct: 67 RCLIVTQDASIIIGKGGSHVNEIRE--KSGARVMVSESIP---GNPERILNVSGPLDAVS 121
Query: 433 DALIQVMTRLRANLFD 448
A ++ R+ FD
Sbjct: 122 KAFGLIVRRINDEPFD 137
>gi|409082121|gb|EKM82479.1| hypothetical protein AGABI1DRAFT_33710 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 365
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 118/263 (44%), Gaps = 37/263 (14%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+GG V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 78 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLD--------------AVSKA 123
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 124 FGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLN-A 182
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP R ++ ++G A + A I + L + +Q + S ++++ S
Sbjct: 183 SEGMLPGSTER---VLSVAGVADAIHIATYYIGTILIE----AQERMPSTSNSTYRPSSQ 235
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
PT GG G + Y P + + + ++ P +G
Sbjct: 236 PRRPT--------------QGGGSSYVPGYSHHAPYGPPHNPPQQLQ-TQQIYIPNDLVG 280
Query: 297 GVIGKGGAIINQIRQESGAAIKV 319
+IGKGG+ IN+IR S + IK+
Sbjct: 281 CIIGKGGSKINEIRHMSASQIKI 303
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 97/207 (46%), Gaps = 32/207 (15%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSA 95
+ G +++ P ++GS+IG+GG +K+++ + +K+ E +PGS ERV++V
Sbjct: 141 VPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGV 200
Query: 96 SDETN--AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG---------HQV---- 140
+D + + G + AQ+ + + + + GG H
Sbjct: 201 ADAIHIATYYIGTILIE-AQERMPSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGP 259
Query: 141 ---------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL---PSCALRS 188
T ++ +P+D +GC+IGKGG + IR + +QI+I++ P+ A
Sbjct: 260 PHNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGG 319
Query: 189 DE---LVQISGEASVVKKALCQIASRL 212
E LV I+G+ + ++ A+ + RL
Sbjct: 320 SEGERLVVITGQPANIQMAVQLLYHRL 346
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 5/144 (3%)
Query: 261 GDTAGD-WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
GD AG + + +AP S+ +R + + +IGKGG+ +N+IR++SGA + V
Sbjct: 41 GDKAGSSYGEASTTAPAVPPSAN-IHMRCLIVTQDASIIIGKGGSHVNEIREKSGARVMV 99
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTS 379
S + ++ VS D +S +VR + G + T + ++P S
Sbjct: 100 SESIPGNPERILNVSGP---LDAVSKAFGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNS 156
Query: 380 RIGCLIGKGGSIITEMRRLTKANI 403
R+G +IGKGGS I E++ + A +
Sbjct: 157 RMGSVIGKGGSKIKEIQDASGAKL 180
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 52/214 (24%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSS---- 335
S+ +++ + P + +G VIGKGG+ I +I+ SGA + G + +++V+
Sbjct: 144 SRAVTIKFMIPNSRMGSVIGKGGSKIKEIQDASGAKLNASEGMLPGSTERVLSVAGVADA 203
Query: 336 ---KEFFEDTLSATIEAVVRLQPRCSEKIERDS---------GLISF------------- 370
++ T+ IEA R+ P S R S G S+
Sbjct: 204 IHIATYYIGTI--LIEAQERM-PSTSNSTYRPSSQPRRPTQGGGSSYVPGYSHHAPYGPP 260
Query: 371 --------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK------ENLPKIAS 416
T ++ +P +GC+IGKGGS I E+R ++ + I+I+ N S
Sbjct: 261 HNPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASQIKIMEPGATGLGPNGAPGGS 320
Query: 417 EDDEMVQISGDLDLAKDALIQVMTRLRANLFDRE 450
E + +V I+G + A IQ+ +L + ++E
Sbjct: 321 EGERLVVITG-----QPANIQMAVQLLYHRLEQE 349
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+ + L+ + +IGKGG V IR ++GA R++ E +P R ++ +SG
Sbjct: 64 IHMRCLIVTQDASIIIGKGGSHVNEIREKSGA--RVMVSESIPGNPER---ILNVSGPLD 118
Query: 200 VVKKALCQIASRLHDNP 216
V KA I R++D P
Sbjct: 119 AVSKAFGLIVRRINDEP 135
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
R L+ T +IGKGGS + E+R K+ R++ E++P + ++ +SG LD
Sbjct: 67 RCLIVTQDASIIIGKGGSHVNEIRE--KSGARVMVSESIP---GNPERILNVSGPLDAVS 121
Query: 433 DALIQVMTRLRANLFD 448
A ++ R+ FD
Sbjct: 122 KAFGLIVRRINDEPFD 137
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 16 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 65
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 66 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 115
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 116 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 171
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 172 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 231
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 232 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 289
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 290 IGCIIGRQGANINEIRQMSGAQIKI 314
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 65
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 66 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 92
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 93 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 132
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 13 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 60
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 61 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 120
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 121 EIRESTGAQVQV 132
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 133/305 (43%), Gaps = 43/305 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDETNAFE 103
R L P R G++IG+GGE +K+LR + + + T+P S+ ER+VT+ + D N
Sbjct: 41 RLLVPSRGAGAVIGKGGESIKRLRAECDATL----TIPDSQTPERIVTIVAEID--NVIR 94
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ + P D K D D++ + +LLV G +IG+GG ++
Sbjct: 95 CVNEII-PRLDECLKTRD--------SDDEGSARGESELRLLVHQSHAGAIIGRGGYRIK 145
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD----NPSRS 219
+R ET Q+++ C ++ ++QI G + + I + L + PSR
Sbjct: 146 ELREETSTQLKVYSQ----CCPQSTERVIQIIGVPEKIIACVILIINMLKEIPIKGPSRP 201
Query: 220 QHLLASAISNSHSSSG----------SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + H G G + AP PYGG +G G S
Sbjct: 202 YESMFYDPNFVHEYGGFPPDRNYRGMGPRGGMYGGGLPPRAPRF-PYGG-RGMGMG-VSP 258
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
+ + + + ++ P G +IGKGG IN+IR+ESGA I V+ +
Sbjct: 259 FPPAPFGGPMQTTQVTI----PNELGGTIIGKGGERINRIREESGAHIVVEPQQPNSER- 313
Query: 330 LITVS 334
+IT+S
Sbjct: 314 IITIS 318
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 68/136 (50%), Gaps = 14/136 (10%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ L++ ++ LRL+ P G VIGKGG I ++R E A + + S T + ++T+ +
Sbjct: 30 QEALAAGKYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQT--PERIVTIVA 87
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIE-RD-----SGLISFTTRLLVPTSRIGCLIGKGG 389
+ + I V + PR E ++ RD S RLLV S G +IG+GG
Sbjct: 88 E------IDNVIRCVNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGG 141
Query: 390 SIITEMRRLTKANIRI 405
I E+R T +++
Sbjct: 142 YRIKELREETSTQLKV 157
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 141/312 (45%), Gaps = 60/312 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ +
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTT-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I E+L D S + VT +++VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-EKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI L +P
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGTPQSIIECVKQICVVMLEQSPP 172
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIV---GIA-PLMGPYGGYKGDTAGDWSRSLYS 273
+ I SGS P++ G A + G + + D ++
Sbjct: 173 K-----GVTIPYRPKPSGS--------PVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQ 219
Query: 274 APRD-----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+P D S++ S + P IG +IG+ G+ IN+IRQ SGA IK+ +
Sbjct: 220 SPFPIAPNNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANP 279
Query: 323 STEGDDCLITVS 334
D +T++
Sbjct: 280 VDGSADRQVTIT 291
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 75/177 (42%), Gaps = 46/177 (25%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 100 LRIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGTPQSIIECV 159
Query: 94 ----------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRV--- 123
S F G + Q A L K+H
Sbjct: 160 KQICVVMLEQSPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQ 219
Query: 124 ----IAEELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
IA +G D Q ++ ++ +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 220 SPFPIAPNNQGFTGMDASAQTSSHEMTIPNDLIGCIIGRQGSKINEIRQMSGAQIKI 276
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S V
Sbjct: 60 TLAGPTTAIFKAFSMIIEKLEED-------ISSSMTNSTATSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LR+V P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRIVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + EK+E D S + + T R++VP S+ G LIGKGG I
Sbjct: 62 AGPTTAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|355746831|gb|EHH51445.1| hypothetical protein EGM_10814, partial [Macaca fascicularis]
Length = 542
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 182/412 (44%), Gaps = 52/412 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+ G+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 136 DFPLRVLVPTQFVGANSGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 195
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+ + +G +IGK G
Sbjct: 196 -------------EAC-----RMILEIMQKEADETKLAEEIPLKIFAHNGLVGRLIGKEG 237
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 238 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 295
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 296 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFATHSGYFSSLYPH 355
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 356 HQFGPFPHHHSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 413
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
SK ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 414 V-----SKRMV--IITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 466
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDA 434
+IGKGG + E++ LT A + I+P++ P E++E +V+I G ++ A
Sbjct: 467 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVIVRIIGHFFASQTA 514
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G +KQL + I+I P +R+V + + E
Sbjct: 368 PEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSKRMVII-TGPPE 426
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 427 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 471
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 472 GKTVNELQNLTSAEVIVPRDQ 492
>gi|392573629|gb|EIW66768.1| hypothetical protein TREMEDRAFT_65168 [Tremella mesenterica DSM
1558]
Length = 350
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 132/297 (44%), Gaps = 46/297 (15%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
R L ++ G +IG+GG+ + +R T K + + VPG ++RV +V A D A
Sbjct: 27 LRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSKVVPGVQDRVFSVSGAVDHVAAA-- 84
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDED---SDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F R++ E D G + +LL+ + +G VIG+ G
Sbjct: 85 ------------FAEVARLLLETPLSDSSLPPPPVGAFTSVRLLISHNLMGTVIGRSGAK 132
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
++ I+ E+GA++ + E LP ++ +V+I G +K A+ +I L ++ R+
Sbjct: 133 IKQIQDESGARM-VASKEMLPQS---TERVVEIQGSVEAIKTAVLEIGKCLMEDWERNTG 188
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVG---------IAPLMGPYGGYK------GDTAGD 266
+ + +G L G A + G +AP G +GG + +A
Sbjct: 189 TVLYH-PGAAGDAGVLAGGLGAQTVTGGLGGIRRSSVAPSFG-FGGERRMSGRPSISAPS 246
Query: 267 WSRSLYSAPR----DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+R + AP +L ++ S+ P +G +IG+GG I +IR+ SG+ I +
Sbjct: 247 ETRRVSDAPPMVNDPNLRTQNISI----PSDMVGCIIGRGGTKITEIRRLSGSRISI 299
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T + +PSD +GC+IG+GG + IR +G++I I K H + + + I G A
Sbjct: 265 TQNISIPSDMVGCIIGRGGTKITEIRRLSGSRISIAKAPHDET----GERMFTIVGTADA 320
Query: 201 VKKALCQIASRLHDNPSRSQHLLASAISNSH 231
++AL + S+L R +L + + H
Sbjct: 321 TERALMLLYSQLESEKER--RMLQAQMEQVH 349
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 84/177 (47%), Gaps = 16/177 (9%)
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
++ + S+P + SLR + G +IGKGG I IR ++ V
Sbjct: 9 TQEVSSSPNGHSDEPQLSLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSKVVPGVQ 68
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLI-----SFTT-RLLVPTSRI 381
D + +VS D ++A V RL E DS L +FT+ RLL+ + +
Sbjct: 69 DRVFSVSGA---VDHVAAAFAEVARL---LLETPLSDSSLPPPPVGAFTSVRLLISHNLM 122
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
G +IG+ G+ I +++ + A + + KE LP+ + +V+I G ++ K A++++
Sbjct: 123 GTVIGRSGAKIKQIQDESGARM-VASKEMLPQ---STERVVEIQGSVEAIKTAVLEI 175
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 96/251 (38%), Gaps = 87/251 (34%)
Query: 134 SDGGH----QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSD 189
S GH Q++ + LV + + G +IGKGGQ + +IR++T + + K +P D
Sbjct: 15 SPNGHSDEPQLSLRALVSTKEAGILIGKGGQTIADIRAKTNVKAGVSK--VVPGV---QD 69
Query: 190 ELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI 249
+ +SG V A ++A L + P +S+S SL P
Sbjct: 70 RVFSVSGAVDHVAAAFAEVARLLLETP----------LSDS-----SLPPP--------- 105
Query: 250 APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQI 309
P G + S+RL+ +G VIG+ GA I QI
Sbjct: 106 -----PVGAFT------------------------SVRLLISHNLMGTVIGRSGAKIKQI 136
Query: 310 RQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIE----------AVVRLQPRCSE 359
+ ESGA + V+SKE + +E AV+ + E
Sbjct: 137 QDESGARM---------------VASKEMLPQSTERVVEIQGSVEAIKTAVLEIGKCLME 181
Query: 360 KIERDSGLISF 370
ER++G + +
Sbjct: 182 DWERNTGTVLY 192
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + +P+ +GC+IG+GG+ ITE+RRL+ + I I + + M I G D
Sbjct: 265 TQNISIPSDMVGCIIGRGGTKITEIRRLSGSRISIAKAPH----DETGERMFTIVGTADA 320
Query: 431 AKDALIQVMTRLRA 444
+ AL+ + ++L +
Sbjct: 321 TERALMLLYSQLES 334
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 26 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 75
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 76 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 125
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 126 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 181
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 182 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 241
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 242 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 299
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 300 IGCIIGRQGANINEIRQMSGAQIKI 324
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 75
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 76 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 102
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 103 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 142
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 70
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 71 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 130
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 131 EIRESTGAQVQV 142
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 92/174 (52%), Gaps = 32/174 (18%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV +++
Sbjct: 26 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGSTN------------- 69
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGG------HQVTAKLLVPSDQIGCVIGKGGQIVQN 164
A+FK +I ++ +D + G +T +L+VP+ Q G +IGKGG ++
Sbjct: 70 ----AIFKAFT-LICKKFEEFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKE 124
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
IR TGA I++ E LP+ R+ V ISG + + + I + + ++P +
Sbjct: 125 IREVTGASIQV-ASEMLPNSTERA---VTISGTGEAITQCIYHICTVMLESPPK 174
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S+ ++RL+ +G +IGK G I+ + R+ESGA I + S +T S+
Sbjct: 10 NDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGSTN 69
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSG-----LISFTTRLLVPTSRIGCLIGKGGSI 391
F+ A + + E + +SG T RL+VP S+ G LIGKGGS
Sbjct: 70 AIFK--------AFTLICKKFEEFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSK 121
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
I E+R +T A+I++ E LP + + V ISG + + + T +
Sbjct: 122 IKEIREVTGASIQVA-SEMLP---NSTERAVTISGTGEAITQCIYHICTVM 168
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ +Q T ++ VP++ IGC+IGKGG + IR +GA IRI + S +D +
Sbjct: 259 NQQNSNQQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGV--TDRTI 316
Query: 193 QISGEASVVKKALCQ 207
ISG V AL Q
Sbjct: 317 TISGNPDAV--ALAQ 329
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI ++ + + D + ISG+ D
Sbjct: 267 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDD--RESGVTDRTITISGNPDA 324
Query: 431 AKDA--LIQVMTRL-RANL 446
A LI + L +ANL
Sbjct: 325 VALAQYLINMSVELQKANL 343
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V
Sbjct: 10 NDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIV 62
Query: 193 QISGEASVVKKALCQIASRLHD 214
++G + + KA I + +
Sbjct: 63 TVTGSTNAIFKAFTLICKKFEE 84
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV 92
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+
Sbjct: 102 LRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTI 150
>gi|62858479|ref|NP_001017139.1| insulin-like growth factor 2 mRNA binding protein 3 [Xenopus
(Silurana) tropicalis]
gi|89272857|emb|CAJ82142.1| IGF-II mRNA-binding protein 3 (imp-3) [Xenopus (Silurana)
tropicalis]
Length = 594
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 176/396 (44%), Gaps = 61/396 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +A
Sbjct: 209 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCSA--- 265
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++I E ++ + +D+ ++ K+L ++ +G +IGK G+ ++
Sbjct: 266 ---------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 310
Query: 164 NIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSR 218
I +T +I I L+D L + + + G KA +I ++ ++N
Sbjct: 311 KIEQDTDTKITISPLQDLTL----YNPERTITVKGSIEACAKAEEEIMKKIRESYENDIA 366
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
+ +L A I + ++ +G+ P + S P
Sbjct: 367 AMNLQAHLIPGLNLNA------------LGLFPPSSSGMPPPSVGVPSPTTSTSYPPFGQ 414
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
E ++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 415 QPESE-TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV---- 467
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + + VP+ G +IGKGG +
Sbjct: 468 ---IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVN 524
Query: 394 EMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 525 ELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 556
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
E LR++ P +G +IGK GA I I +++ + I + G + IT+ S +
Sbjct: 205 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST---PE 261
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFT----TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + ++ + +++++ FT ++L + +G LIGK G + ++ +
Sbjct: 262 GCSAACKIIMEI-------MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 314
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
T I I P ++L + + + G ++ A ++M ++R + + A++
Sbjct: 315 DTDTKITISPLQDL--TLYNPERTITVKGSIEACAKAEEEIMKKIRESYENDIAAMNLQA 372
Query: 458 PVLP 461
++P
Sbjct: 373 HLIP 376
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 25/145 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 416 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPE- 474
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
A FK R+ E G ++ ++ A + VPS G V
Sbjct: 475 ----------------AQFKAQGRIYGKLKEENFFGPKEEV---KLEAHIKVPSYAAGRV 515
Query: 155 IGKGGQIVQNIRSETGAQIRILKDE 179
IGKGG+ V +++ T A++ + +D+
Sbjct: 516 IGKGGKTVNELQNLTSAEVVVPRDQ 540
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 173 GAT----IPYRP 180
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 91/325 (28%), Positives = 143/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S----------QHLLASA---ISNSHSSSGSLVG-----------PTAATPIVG---IAP 251
S Q + AS+ + G G P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCGDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|426227473|ref|XP_004007842.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Ovis aries]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 151/326 (46%), Gaps = 42/326 (12%)
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
E + ++ K+L ++ +G +IGK G+ ++ I +T +I I + L +
Sbjct: 130 EQARHTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERT 187
Query: 192 VQISGEASVVKKALCQIASRL---HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG 248
+ + G KA +I ++ ++N S +L A I + ++ L PT+ P
Sbjct: 188 ITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMP--- 244
Query: 249 IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
T+G S P+ + S+ ++ L P ++G +IGK G I Q
Sbjct: 245 ------------PPTSGPPSAMTPPYPQFEQQSETETVHLFIPALSVGAIIGKQGQHIKQ 292
Query: 309 IRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL- 367
+ + +GA+IK+ + E D + + ++ EA + Q R KI+ ++ +
Sbjct: 293 LSRFAGASIKI--APAEAPDAKVRMV-------IITGPPEAQFKAQGRIYGKIKEENFVS 343
Query: 368 ----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MV 422
+ + VP+ G +IGKGG + E++ L+ A + ++P++ P E+D+ +V
Sbjct: 344 PKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVV 399
Query: 423 QISGDL---DLAKDALIQVMTRLRAN 445
+I+G +A+ + +++T+++ +
Sbjct: 400 KITGHFYACQVAQRKIQEILTQVKQH 425
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 80/179 (44%), Gaps = 42/179 (23%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV-------Y 93
+TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 268 ETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQF 326
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
A + FVSP ++ + H R VPS G
Sbjct: 327 KAQGRIYGKIKEENFVSPKEEVKLEAHIR-----------------------VPSFAAGR 363
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
VIGKGG+ V +++ + A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 364 VIGKGGKTVNELQNLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQVAQR 413
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 204
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 206 AT----IPYRP 212
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + ++ + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIVNS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-----------IVNSMSNS-----PATSKPPV---- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 102/225 (45%), Gaps = 36/225 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 62 TGPTDAIFKAFAMIAYKFEEDIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EG 451
E+R T A +++ + LP + + V ISG DA+IQ + ++ + + +G
Sbjct: 122 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 173
Query: 452 AVSTFVPVLPYIPVSENG----SDGLNYESRDSKRHGRGPPYGGY 492
A + P PV G +D L + + + PP Y
Sbjct: 174 ATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAY 218
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 319
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 26 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 75
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 76 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 125
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 126 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 181
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 182 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 241
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 242 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 299
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 300 IGCIIGRQGANINEIRQMSGAQIKI 324
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 75
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 76 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 102
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 103 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 142
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 70
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 71 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 130
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 131 EIRESTGAQVQV 142
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
D Q T +L +P++ IGC+IG+ G + IR +GAQI+I S V I
Sbjct: 284 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE-----GSSGRQVTI 338
Query: 195 SGEASVVKKALCQIASRL 212
+G A+ + A I +RL
Sbjct: 339 TGSAASISLAQYLINARL 356
>gi|166796167|gb|AAI59042.1| igf2bp3 protein [Xenopus (Silurana) tropicalis]
Length = 559
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 176/396 (44%), Gaps = 61/396 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +A
Sbjct: 174 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCSA--- 230
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++I E ++ + +D+ ++ K+L ++ +G +IGK G+ ++
Sbjct: 231 ---------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 275
Query: 164 NIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSR 218
I +T +I I L+D L + + + G KA +I ++ ++N
Sbjct: 276 KIEQDTDTKITISPLQDLTL----YNPERTITVKGSIEACAKAEEEIMKKIRESYENDIA 331
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
+ +L A I + ++ +G+ P + S P
Sbjct: 332 AMNLQAHLIPGLNLNA------------LGLFPPSSSGMPPPSVGVPSPTTSTSYPPFGQ 379
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
E ++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 380 QPESE-TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV---- 432
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + + VP+ G +IGKGG +
Sbjct: 433 ---IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVN 489
Query: 394 EMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 490 ELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 521
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
E LR++ P +G +IGK GA I I +++ + I + G + IT+ S +
Sbjct: 170 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST---PE 226
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTT----RLLVPTSRIGCLIGKGGSIITEMRR 397
SA + ++ + +++++ FT ++L + +G LIGK G + ++ +
Sbjct: 227 GCSAACKIIMEI-------MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 279
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
T I I P ++L + + + G ++ A ++M ++R + + A++
Sbjct: 280 DTDTKITISPLQDL--TLYNPERTITVKGSIEACAKAEEEIMKKIRESYENDIAAMNLQA 337
Query: 458 PVLP 461
++P
Sbjct: 338 HLIP 341
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 25/145 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 381 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPE- 439
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIA----EELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
A FK R+ E G ++ ++ A + VPS G V
Sbjct: 440 ----------------AQFKAQGRIYGKLKEENFFGPKEEV---KLEAHIKVPSYAAGRV 480
Query: 155 IGKGGQIVQNIRSETGAQIRILKDE 179
IGKGG+ V +++ T A++ + +D+
Sbjct: 481 IGKGGKTVNELQNLTSAEVVVPRDQ 505
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 89/167 (53%), Gaps = 17/167 (10%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D F +
Sbjct: 23 KEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI--------FKAF 72
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ IR TGA
Sbjct: 73 AMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGA 129
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
Q+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 130 QVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 126 STGAQVQV 133
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 121 KEIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 173 GAT----IPYRP 180
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 146/325 (44%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ +++ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRKSTGAQVQVAGD-MLPN---STEQAITIAGMPQSVTECVKQICLVMLETISQ 172
Query: 219 S----------QHLLASA----------ISNS----HSSSGSLVGPTAATPIVG---IAP 251
S Q + AS+ SN+ H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRYSNTAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LHLANLNQVARQQSHFAMMHGGTGFAGIDSNSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ G IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGTNINEIRQMSGAQIKI 315
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R+ T A +++
Sbjct: 122 EIRKSTGAQVQV 133
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKSTGAQVQV 133
>gi|222636947|gb|EEE67079.1| hypothetical protein OsJ_24052 [Oryza sativa Japonica Group]
Length = 544
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 122/263 (46%), Gaps = 35/263 (13%)
Query: 109 VSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
+SPAQ+AL + D L G+ + G ++T +LV + ++ GKG I+ I +E
Sbjct: 73 LSPAQEALVALLDSGWVVHLNGE--AWGAERMTCLVLVEAGRLEAASGKG--ILWTIANE 128
Query: 169 TGAQIRILKDEHLPSCALRS---DELVQISGEASVVKKALCQIASRLH-DNPSRSQHLLA 224
+GA++R+ A + +E+V+I+G+ + V++AL ++S L D P L
Sbjct: 129 SGAEVRVTPWGGEGGAAYAAQPPEEVVEITGDGTTVRRALVSVSSCLQGDGP------LG 182
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS--- 281
S+ S +HS + L P P MG D + + R+ S P D
Sbjct: 183 SSTS-AHSVNPILTQTFPKVP----EPEMG---SLYSDMSTE--RANTSIPHIDCPQGAT 232
Query: 282 --------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+FS RL+CPV GG+IGK G +I I SGA++ V + ITV
Sbjct: 233 GIEQTECVMQFSFRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITV 292
Query: 334 SSKEFFEDTLSATIEAVVRLQPR 356
S+ E S AV+R+ R
Sbjct: 293 SALEKPGQKFSMVENAVLRIFDR 315
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ G +IG+ G ++K + +++ + + +G V ER +TV +A E
Sbjct: 245 FRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITV-------SALEK 297
Query: 105 -GDKFVSPAQDALFKVHDRV 123
G KF S ++A+ ++ DR+
Sbjct: 298 PGQKF-SMVENAVLRIFDRM 316
>gi|28212254|ref|NP_783184.1| insulin-like growth factor 2 mRNA-binding protein 1 [Rattus
norvegicus]
gi|81866340|sp|Q8CGX0.1|IF2B1_RAT RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=B-actin zipcode-binding protein 1; Short=rZBP-1;
AltName: Full=IGF-II mRNA-binding protein 1; AltName:
Full=VICKZ family member 1
gi|27464838|gb|AAO16210.1| b-actin zipcode binding protein 1 [Rattus norvegicus]
gi|149053959|gb|EDM05776.1| insulin-like growth factor 2, binding protein 1 [Rattus norvegicus]
gi|171846741|gb|AAI61831.1| Insulin-like growth factor 2 mRNA binding protein 1 [Rattus
norvegicus]
Length = 577
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 173/394 (43%), Gaps = 65/394 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
++ + +T +I I L+D L + + + G +A +I ++ ++N
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREAYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG--PYGGYKGDTAGDWSRSLYS 273
+ L + I + ++ L +++ + + G PYG S
Sbjct: 354 DVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYG------------SFMQ 401
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
AP ++ +++ P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 402 APEQEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV 455
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKG 388
++ EA + Q R K++ ++ + T + VP S G +IGKG
Sbjct: 456 ---------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKG 506
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
G + E++ LT A + ++P++ P E+D+++
Sbjct: 507 GKTVNELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 23/171 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
++ + HD S GG +T +L+VP+ Q G +IGKGG ++ IR
Sbjct: 82 KFEEWCSQFHDI----------QSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 131
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 132 VTGASIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 178
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 20/197 (10%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSG----LISFTTRLLVPTSRIGCLIGKGGSII 392
F+ A + + CS+ + SG T RL+VP S+ G LIGKGGS I
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R +T A+I++ E LP + + V ISG +A+ Q + + + +
Sbjct: 127 KEIREVTGASIQVA-SEMLP---NSTERAVTISG----TSEAITQCIYHICCVMLESPPK 178
Query: 453 VSTFVPVLPYIPVSENG 469
+T +PY P + G
Sbjct: 179 GAT----IPYRPKPQVG 191
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 84/201 (41%), Gaps = 61/201 (30%)
Query: 121 DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
D + A+ + D+ S +T +L++ ++G +IGK G+IV+ R E+GA+I I
Sbjct: 2 DNMDAKPVLNDDPSV---TLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG-- 56
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP 240
SC R +V ++G + + KA I + + S + S G
Sbjct: 57 --SCPER---IVTVTGPTNSIFKAFTLICKKFEE--------WCSQFHDIQSGGG----- 98
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
PR ++ LRL+ P + G +IG
Sbjct: 99 ---------------------------------VPRPPIT-----LRLIVPASQCGSLIG 120
Query: 301 KGGAIINQIRQESGAAIKVDS 321
KGG+ I +IR+ +GA+I+V S
Sbjct: 121 KGGSKIKEIREVTGASIQVAS 141
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 424
Query: 431 AKDA--LIQVMTRL-RANL 446
A LI + L +ANL
Sbjct: 425 VALAQYLISMSVELQKANL 443
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 424
Query: 201 VKKA--LCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP----TAATPIVGIAPL 252
V A L ++ L +Q+ + ++G+ P T A+P+ PL
Sbjct: 425 VALAQYLISMSVELQKANLEAQNTQTPGSGTTPGATGASASPSNTTTTASPLASAIPL 482
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 105 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 159
>gi|395333911|gb|EJF66288.1| hypothetical protein DICSQDRAFT_159257 [Dichomitus squalens
LYAD-421 SS1]
Length = 405
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 115/268 (42%), Gaps = 42/268 (15%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+GG V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 115 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGPLD--------------AVSKA 160
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 161 FGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLN-A 219
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR---SQHLLASAISNSHSS 233
+ LP R L+ +SG A + A I + L + R S H S S
Sbjct: 220 SEGMLPGSTER---LLSVSGVADAIHIATYYIGNILIEANERMPSSNHSTYRPTSQSRRP 276
Query: 234 S--GSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCP 291
GS P A A PY G P L +++ + P
Sbjct: 277 PYMGSSYVPGYAPAAAAAATAHNPYAG---------------GPPSQLQTQQ----IYIP 317
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKV 319
+G +IGKGGA IN+IR S + IK+
Sbjct: 318 NDLVGCIIGKGGAKINEIRHMSASQIKI 345
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSA 95
+ G +++ P ++GS+IG+GG +K+++ + +++ E +PGS ER+++V
Sbjct: 178 VPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERLLSVSGV 237
Query: 96 SDET--------NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG----------- 136
+D N + ++ + + + ++ + G G
Sbjct: 238 ADAIHIATYYIGNILIEANERMPSSNHSTYRPTSQSRRPPYMGSSYVPGYAPAAAAAATA 297
Query: 137 ---------GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL------ 181
T ++ +P+D +GC+IGKGG + IR + +QI+I++ +
Sbjct: 298 HNPYAGGPPSQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGMNG 357
Query: 182 -PSCALRSDE-LVQISGEASVVKKALCQIASRL 212
P+ A E LV I+G+ + ++ A+ + SRL
Sbjct: 358 APAPAGSEGERLVVITGQPANIQMAVQLLYSRL 390
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG+ +N+IR++SGA + V S + ++ VS D +S +VR R
Sbjct: 115 IIGKGGSHVNEIREKSGARVMVSESIPGNPERILNVSGP---LDAVSKAFGLIVR---RI 168
Query: 358 S-EKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ E ++ S G + T + ++P SR+G +IGKGG+ I E++ + A +
Sbjct: 169 NDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARL 217
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 13/88 (14%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK-------ENLPKIA-SEDDEMV 422
T ++ +P +GC+IGKGG+ I E+R ++ + I+I+ P A SE + +V
Sbjct: 311 TQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGAVGVGMNGAPAPAGSEGERLV 370
Query: 423 QISGDLDLAKDALIQVMTRLRANLFDRE 450
I+G + A IQ+ +L + ++E
Sbjct: 371 VITG-----QPANIQMAVQLLYSRLEQE 393
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+ + L+ + +IGKGG V IR ++GA R++ E +P R ++ +SG
Sbjct: 100 NIHMRCLIVTQDASIIIGKGGSHVNEIREKSGA--RVMVSESIPGNPER---ILNVSGPL 154
Query: 199 SVVKKALCQIASRLHDNP 216
V KA I R++D P
Sbjct: 155 DAVSKAFGLIVRRINDEP 172
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 6/99 (6%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
R L+ T +IGKGGS + E+R K+ R++ E++P + ++ +SG LD
Sbjct: 104 RCLIVTQDASIIIGKGGSHVNEIRE--KSGARVMVSESIP---GNPERILNVSGPLDAVS 158
Query: 433 DALIQVMTRLRANLFDREGAV-STFVPVLPYIPVSENGS 470
A ++ R+ FD+ S V + IP S GS
Sbjct: 159 KAFGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGS 197
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGYIIGRQGANINEIRQMSGAQIKI 315
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|25012807|gb|AAN71494.1| RE72930p [Drosophila melanogaster]
Length = 580
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 191/426 (44%), Gaps = 70/426 (16%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + + +V + +G E S
Sbjct: 121 HRKENV-GSLEKSITIYGNPENCTNACKR-----------ILEVMQQEAISTNKG-ELSP 167
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 168 ECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 225
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 226 G---------------LIENMSRAENQISTKLRQSYENDLQAIAPQSLM-FPGLHPMAMM 269
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 270 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 326
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 327 TRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 381
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 382 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 439
Query: 415 ASEDDE 420
+ D+E
Sbjct: 440 SGGDEE 445
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 309 QETTYLYI-PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 367
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 368 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 410
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 411 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 470
Query: 214 DNP 216
NP
Sbjct: 471 TNP 473
>gi|327275834|ref|XP_003222677.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Anolis carolinensis]
Length = 576
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/393 (21%), Positives = 172/393 (43%), Gaps = 77/393 (19%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++++S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A ++I E ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 253 CSAA------------------CKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGK 294
Query: 158 GGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G+ ++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 295 EGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCRAEQEIMKKVREA 350
Query: 216 -------PSRSQHLLA----SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA 264
S HL+ +A+ +SS ++ P ++ + G AP Y +
Sbjct: 351 YENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPPSS--VSGAAP----YSSF----- 399
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
L ++ ++ + P +G +IGK G I Q+ + + A+IK+ + T
Sbjct: 400 --------------LPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPAET 445
Query: 325 EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTS 379
+ + ++ EA + Q R K++ ++ + T + VP S
Sbjct: 446 PDSKVRMVI---------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPAS 496
Query: 380 RIGCLIGKGGSIITEMRRLTKANIRILPKENLP 412
G +IGKGG + E++ LT A + ++P++ P
Sbjct: 497 AAGRVIGKGGKTVNELQNLTAAEV-VVPRDQTP 528
>gi|125558153|gb|EAZ03689.1| hypothetical protein OsI_25823 [Oryza sativa Indica Group]
Length = 610
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 122/263 (46%), Gaps = 35/263 (13%)
Query: 109 VSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
+SPAQ+AL + D L G+ + G ++T +LV + ++ GKG I+ I +E
Sbjct: 139 LSPAQEALVALLDSGWVVHLNGE--AWGAERMTCLVLVEAGRLEAASGKG--ILWTIANE 194
Query: 169 TGAQIRILKDEHLPSCALRS---DELVQISGEASVVKKALCQIASRLH-DNPSRSQHLLA 224
+GA++R+ A + +E+V+I+G+ + V++AL ++S L D P L
Sbjct: 195 SGAEVRVTPWGGEGGAAYAAQPPEEVVEITGDGTTVRRALVSVSSCLQGDGP------LG 248
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS--- 281
S+ S +HS + L P P MG D + + R+ S P D
Sbjct: 249 SSTS-AHSVNPILTQTFPKVP----EPEMG---SLYSDMSTE--RANTSIPHIDCPQGAT 298
Query: 282 --------KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+FS RL+CPV GG+IGK G +I I SGA++ V + ITV
Sbjct: 299 GIEQTECVMQFSFRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITV 358
Query: 334 SSKEFFEDTLSATIEAVVRLQPR 356
S+ E S AV+R+ R
Sbjct: 359 SALEKPGQKFSMVENAVLRIFDR 381
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFED 104
+R LCP+ G +IG+ G ++K + +++ + + +G V ER +TV +A E
Sbjct: 311 FRLLCPVTLAGGLIGKNGMVIKAIEVNSGASVDVGGPVHRCMERAITV-------SALEK 363
Query: 105 -GDKFVSPAQDALFKVHDRV 123
G KF S ++A+ ++ DR+
Sbjct: 364 PGQKF-SMVENAVLRIFDRM 382
>gi|449450341|ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216803 [Cucumis sativus]
gi|449494409|ref|XP_004159539.1| PREDICTED: uncharacterized LOC101216803 [Cucumis sativus]
Length = 694
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 116/233 (49%), Gaps = 30/233 (12%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDG 105
P ++G IIG+GGE +K L++ + +KI++ + P S R+V + D+
Sbjct: 141 IPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQ---IAKA 197
Query: 106 DKFVSPAQDALFKVHDR---VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
++ ++ D L + +++ L G S+ Q K +P++++G VIGKGG+ +
Sbjct: 198 EQLIN---DVLSEAESGGSGIVSRRLTGPSGSE---QFVMK--IPNNKVGLVIGKGGETI 249
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
+++++ TGA+I+++ HLP ++ +QI G + ++ A + + +N +R+
Sbjct: 250 KSMQARTGARIQVIP-LHLPPGDTSTERTLQIDGSSEQIESAKQLVNEVISENRARN--- 305
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +S ++ G P ++ G P+ P GY G G YSAP
Sbjct: 306 --SGMSGGYNQQGYQARPPSSWGPPGAPPMQQPNYGY-GQQGG------YSAP 349
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 85/174 (48%), Gaps = 20/174 (11%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-------DSSSTEGDDCLIT----V 333
S ++ P +G +IGKGG I ++ +SGA I+V +S+T + + T
Sbjct: 136 SKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQIA 195
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+++ D LS + S ++ SG F + +P +++G +IGKGG I
Sbjct: 196 KAEQLINDVLSEAESGGSGI---VSRRLTGPSGSEQFV--MKIPNNKVGLVIGKGGETIK 250
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISG---DLDLAKDALIQVMTRLRA 444
M+ T A I+++P +LP + + +QI G ++ AK + +V++ RA
Sbjct: 251 SMQARTGARIQVIPL-HLPPGDTSTERTLQIDGSSEQIESAKQLVNEVISENRA 303
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAGLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 143/303 (47%), Gaps = 38/303 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSEERVVTVYSASD 97
+ V + L P GSIIG+GG+++ L+ D+K++IR+ +T PG++ERV+ + +
Sbjct: 20 DKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVI---TG 76
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAEEL--RGDEDSDGGHQVTAKLLVPSDQIGCVI 155
++F+ L KV + A++ G D + Q+ K++VP+ G +I
Sbjct: 77 SIAGVRQVNRFI------LEKVSEEGKADKAIQYGVLDKNRNRQL--KMIVPNAAAGVII 128
Query: 156 GKGGQIVQNIRSETGAQIRILK-------DEHLPSCALRSDELVQISGEASVVKKALCQI 208
GKGG ++ I+ ++GA +++ + DE + + +E +++ ++ K L I
Sbjct: 129 GKGGSNIKEIQDKSGAHVQVSQKKAQYAIDERILTVTGEFNE--RLTAWELIIWKCLEDI 186
Query: 209 ASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYK-------G 261
+ + + S S A + HS+ G P+ A PY +
Sbjct: 187 NNLPNTSVSYSHVEPAGTLPALHSNYYG-GGNANDRPMDSSAASYDPYTSERYSPTQVTQ 245
Query: 262 DTAGDWSRSLYSAP---RDDLSSK--EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA 316
D D + S P R++ S E +++ P + IG ++GK G +I+ I+ SGA
Sbjct: 246 DAQADRQYGMQSYPPTARNNRPSSYGETVIKIPVPDSIIGAILGKRGKVISDIQNISGAH 305
Query: 317 IKV 319
I+V
Sbjct: 306 IQV 308
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 80/163 (49%), Gaps = 16/163 (9%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+D+ S + L+L+ P G +IGKGG +IN ++ +S I++ + +D
Sbjct: 14 KDNSSGDKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRL----SHNNDTFPGTKE 69
Query: 336 KEFFEDTLSATIEAVVR-LQPRCSEKIERDSGLI--------SFTTRLLVPTSRIGCLIG 386
+ A + V R + + SE+ + D + + +++VP + G +IG
Sbjct: 70 RVIVITGSIAGVRQVNRFILEKVSEEGKADKAIQYGVLDKNRNRQLKMIVPNAAAGVIIG 129
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
KGGS I E++ + A++++ K+ I D+ ++ ++G+ +
Sbjct: 130 KGGSNIKEIQDKSGAHVQVSQKKAQYAI---DERILTVTGEFN 169
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 46/233 (19%), Positives = 98/233 (42%), Gaps = 63/233 (27%)
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI-LKDEHLPSCALRSDE 190
+D+ G +V KLL+P+ G +IGKGG ++ ++++++ +IR+ ++ P R
Sbjct: 14 KDNSSGDKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKER--- 70
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
++ I+G + V++ I ++ + + + + + + ++ P AA
Sbjct: 71 VIVITGSIAGVRQVNRFILEKVSEEGKADKAIQYGVLDKNRNRQLKMIVPNAAA------ 124
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
G +IGKGG+ I +I+
Sbjct: 125 ---------------------------------------------GVIIGKGGSNIKEIQ 139
Query: 311 QESGAAIKVDSSSTEG--DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
+SGA ++V + D+ ++TV+ + F + L+A E ++ +C E I
Sbjct: 140 DKSGAHVQVSQKKAQYAIDERILTVTGE--FNERLTAW-ELIIW---KCLEDI 186
>gi|363737066|ref|XP_003641794.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Gallus gallus]
Length = 564
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 172/391 (43%), Gaps = 58/391 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K L T+SK+ I + G+ E+ +T+++ + +
Sbjct: 180 DFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS 239
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I + ++ + D + ++ K+L + +G +IGK G
Sbjct: 240 -------------EAC-----RMILDIMQKEADETKSAEEIPLKILAHNSLVGRLIGKEG 281
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I +TG +I I + L + + + G A +I +L ++N
Sbjct: 282 RNLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGSTEACSNAEVEIMKKLREAYEND 339
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+ + A+ I + S+ + G++ M P A ++ P
Sbjct: 340 IVAVNQQANLIPGLNLSALGIFS-------TGLS--MLPSSAGARGAAAAAPYHPFALPE 390
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
++ + L P +G +IGK G I Q+ + +GA+IK+ + EG D +
Sbjct: 391 QEV------VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--APAEGPDATERMV-- 440
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + + VP+ G +IGKGG
Sbjct: 441 -----IITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKT 495
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + I+P++ P E++E++
Sbjct: 496 VNELQNLTSAEV-IVPRDQTP---DENEEVI 522
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G+ +KQL + I+I P + ER+V + + E
Sbjct: 389 PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMV-IITGPPE 447
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 448 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIKVPSFAAGRVIGKG 492
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 493 GKTVNELQNLTSAEVIVPRDQ 513
>gi|242048332|ref|XP_002461912.1| hypothetical protein SORBIDRAFT_02g010550 [Sorghum bicolor]
gi|241925289|gb|EER98433.1| hypothetical protein SORBIDRAFT_02g010550 [Sorghum bicolor]
Length = 579
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 114/241 (47%), Gaps = 22/241 (9%)
Query: 109 VSPAQDALFKVHDRVIAEELRGDEDSDGGH---QVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+SPAQ+AL V D A G+E++ G +VT LLV +D++ G+G +++ I
Sbjct: 107 LSPAQEALVAVIDTQGALYCAGEEEARGKAPPGRVTCLLLVDADRLEASAGRG--VMERI 164
Query: 166 RSETGAQIRILKDEH--LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
E GA +R+ E LP +E+V+I+G+ + V+KAL ++S L + L
Sbjct: 165 ALEAGADVRVAMWEEGALPPRGQPPEEVVEITGDRTAVRKALVALSSCLQGD-------L 217
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL---- 279
S ++ + P A++ + G P MG S + P +
Sbjct: 218 PIGNSTAYDKKEGSILPWASSEVPG--PNMGTSCSEVSTEFAQGSVAKTHCPEGNTGYVQ 275
Query: 280 --SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+ ++ S RL+ P GG+IGK G II I E+GA I V + T + +IT+ + E
Sbjct: 276 SKTLQQVSFRLLLPTYLAGGLIGKRGLIIKGIEDETGACIDVGAPVTGCKERVITICALE 335
Query: 338 F 338
Sbjct: 336 I 336
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 139/319 (43%), Gaps = 77/319 (24%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 4 KEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------------- 47
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQN 164
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKGG ++
Sbjct: 48 ---AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKE 103
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS----- 219
IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+S
Sbjct: 104 IRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQSPQGRV 159
Query: 220 -------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAPL----- 252
Q + A H++ P A I G I+PL
Sbjct: 160 MTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKL 219
Query: 253 ------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
M G+ G + Y A D +S + + L P IG +IG
Sbjct: 220 NQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNLIGCIIG 277
Query: 301 KGGAIINQIRQESGAAIKV 319
+ GA IN+IRQ SGA IK+
Sbjct: 278 RQGANINEIRQMSGAQIKI 296
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 86/182 (47%), Gaps = 31/182 (17%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G +IGK G + +IR+ESGA I + +EG+ C + TL+ A+ +
Sbjct: 6 VGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITLTGPTNAIFKAF 53
Query: 355 PRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
+K+E D S + + T RL+VP ++ G LIGKGG I E+R T A ++
Sbjct: 54 AMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQ 113
Query: 405 ILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR-EGAVSTFVPVLPYI 463
+ + LP + + + I+G + + Q+ + L +G V T +PY
Sbjct: 114 VA-GDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT----IPYQ 165
Query: 464 PV 465
P+
Sbjct: 166 PM 167
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTV 92
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 81 LRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITI 129
>gi|380806987|gb|AFE75369.1| RNA-binding protein Nova-2, partial [Macaca mulatta]
Length = 296
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 97/201 (48%), Gaps = 16/201 (7%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAFEDGDKFVSP 111
GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA F++
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAVHS---FIAE 57
Query: 112 AQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + + + L+ + AKL+VP+ G +IGKGG V+ + ++G
Sbjct: 58 KVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSG 117
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL------LA 224
A +++ + P + +V +SGE V KA+ I ++ ++P S L +A
Sbjct: 118 AWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQEDPQSSSCLNISYANVA 174
Query: 225 SAISNSHSSSGSLVGPTAATP 245
++NS+ + P P
Sbjct: 175 GPVANSNPTGSPYASPADVLP 195
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 19/162 (11%)
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEFFEDTLSATIEAV 350
G +IGKGG I Q+++E+GA IK+ S T CL+ +++ + + + I
Sbjct: 1 GSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEAL--NAVHSFIAEK 58
Query: 351 VRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
VR P+ K E + L TT +L+VP S G +IGKGG+ + + + A
Sbjct: 59 VREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGA 118
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 119 WVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 157
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE---GDDCLIT 332
RDD K LR + G +IGKGG+ IN+ + +SGA I++ S +D +I
Sbjct: 4 RDD-KEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIM 62
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
VS F++ + A +E + L+ +E E + RL+VP S G +IGKGGS I
Sbjct: 63 VSG--LFDEVIKA-MELI--LEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTI 117
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
+ A I+I P++N D +V ++G LD A+ ++++L ++
Sbjct: 118 KSFIEDSHAGIKISPQDN--NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNL 175
Query: 453 VSTF------VPVLPYIPV 465
S F P P +PV
Sbjct: 176 SSPFPYAGLGFPSYPGVPV 194
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 141/328 (42%), Gaps = 32/328 (9%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L G IIG+GG + + + + ++I++ E PG+ +R++ V DE
Sbjct: 11 THLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEV 70
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A+ + ++++AE G+E ++ + +L+VP+ G +IGKGG
Sbjct: 71 -------------IKAMELILEKLLAE---GEESNEAEARPKVRLVVPNSSCGGIIGKGG 114
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL----HDN 215
+++ ++ A I+I ++ + D LV ++G +A+ I S+L H
Sbjct: 115 STIKSFIEDSHAGIKISPQDN--NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYP 172
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
P+ S + + S G VG A GP GY G + + +P
Sbjct: 173 PNLSSPFPYAGLGFP-SYPGVPVGYMIPQVPYNNAVNYGP-NGYGGRYQNNKPSTPMRSP 230
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ + SL + +IG V+G+ G I +I Q SGA IK+ S GD T
Sbjct: 231 ANN--DAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKI---SDRGDFIAGTSER 285
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIER 363
K T A A + R + ER
Sbjct: 286 KVTITGTSEAIQAAESMIMQRVTASSER 313
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 16/198 (8%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE---GDDCLITV 333
+D K LR + G +IGKGG+ IN+ + +SGA I++ S +D +I V
Sbjct: 34 EDDKEKPTHLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMV 93
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
S F++ + A +E + L+ +E E + RL+VP S G +IGKGGS I
Sbjct: 94 SG--LFDEVIKA-MELI--LEKLLAEGEESNEAEARPKVRLVVPNSSCGGIIGKGGSTIK 148
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
+ A I+I P++N D +V ++G LD A+ ++++L ++
Sbjct: 149 SFIEDSHAGIKISPQDN--NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYPPNLS 206
Query: 454 STF------VPVLPYIPV 465
S F P P +PV
Sbjct: 207 SPFPYAGLGFPSYPGVPV 224
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 141/328 (42%), Gaps = 32/328 (9%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L G IIG+GG + + + + ++I++ E PG+ +R++ V DE
Sbjct: 41 THLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEV 100
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
A+ + ++++AE G+E ++ + +L+VP+ G +IGKGG
Sbjct: 101 -------------IKAMELILEKLLAE---GEESNEAEARPKVRLVVPNSSCGGIIGKGG 144
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL----HDN 215
+++ ++ A I+I ++ + D LV ++G +A+ I S+L H
Sbjct: 145 STIKSFIEDSHAGIKISPQDN--NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVHYP 202
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
P+ S + + S G VG A GP GY G + + +P
Sbjct: 203 PNLSSPFPYAGLGFP-SYPGVPVGYMIPQVPYNNAVNYGP-NGYGGRYQNNKPSTPMRSP 260
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ + SL + +IG V+G+ G I +I Q SGA IK+ S GD T
Sbjct: 261 ANN--DAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKI---SDRGDFIAGTSER 315
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIER 363
K T A A + R + ER
Sbjct: 316 KVTITGTSEAIQAAESMIMQRVTASSER 343
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 90/171 (52%), Gaps = 23/171 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
++ + HD S GG +T +L+VP+ Q G +IGKGG ++ IR
Sbjct: 82 KFEEWCSQFHDI----------QSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 131
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 132 VTGASIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 178
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 20/197 (10%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSG----LISFTTRLLVPTSRIGCLIGKGGSII 392
F+ A + + CS+ + SG T RL+VP S+ G LIGKGGS I
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R +T A+I++ E LP + + V ISG +A+ Q + + + +
Sbjct: 127 KEIREVTGASIQVA-SEMLP---NSTERAVTISG----TSEAITQCIYHICCVMLESPPK 178
Query: 453 VSTFVPVLPYIPVSENG 469
+T +PY P + G
Sbjct: 179 GAT----IPYRPKPQVG 191
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 78/189 (41%), Gaps = 58/189 (30%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIV 63
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I + + S + S G
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEE--------WCSQFHDIQSGGG----------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
PR + +LRL+ P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------VPRPPI-----TLRLIVPASQCGSLIGKGGSKIKEIREV 132
Query: 313 SGAAIKVDS 321
+GA+I+V S
Sbjct: 133 TGASIQVAS 141
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 8/118 (6%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 330
Query: 201 VKKA--LCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGP----TAATPIVGIAPL 252
V A L ++ L +Q+ + ++G+ P T A+P+ PL
Sbjct: 331 VALAQYLISMSVELQKANLEAQNTQTPGSGTTPGATGASASPSNTTTTASPLASAIPL 388
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 330
Query: 431 AKDA--LIQVMTRL-RANL 446
A LI + L +ANL
Sbjct: 331 VALAQYLISMSVELQKANL 349
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 105 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 159
>gi|67971394|dbj|BAE02039.1| unnamed protein product [Macaca fascicularis]
Length = 316
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 151/326 (46%), Gaps = 43/326 (13%)
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
+D ++ K+L ++ +G +IGK G+ ++ I +T +I I + L +
Sbjct: 6 QDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERT 63
Query: 192 VQISGEASVVKKALCQIASRL---HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG 248
+ + G KA +I ++ ++N S +L A I + ++ L PT+ P
Sbjct: 64 ITVKGNVETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMP--- 120
Query: 249 IAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQ 308
T+G S P+ + S E ++ L P ++G +IGK G I Q
Sbjct: 121 ------------PPTSGPPSAMTPPYPQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQ 167
Query: 309 IRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL- 367
+ + +GA+IK+ + E D + + ++ EA + Q R KI+ ++ +
Sbjct: 168 LSRFAGASIKI--APAEAPDAKVRMV-------IITGPPEAQFKAQGRIYGKIKEENFVS 218
Query: 368 ----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MV 422
+ + VP+ G +IGKGG + E++ L+ A + ++P++ P E+D+ +V
Sbjct: 219 PKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVV 274
Query: 423 QISGDL---DLAKDALIQVMTRLRAN 445
+I+G +A+ + +++T+++ +
Sbjct: 275 KITGHFYACQVAQRKIQEILTQVKQH 300
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 42/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 136 QFEQSETETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 194
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H R V
Sbjct: 195 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIR-----------------------V 231
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V +++ + A++ + +D+ +D+ +V+I+G
Sbjct: 232 PSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 282
Query: 206 CQIASR 211
CQ+A R
Sbjct: 283 CQVAQR 288
>gi|410910370|ref|XP_003968663.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 496
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 99/202 (49%), Gaps = 18/202 (8%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 47 KRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 98
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV- 140
PG+ ERV + + N + F++ + + + + + + +V
Sbjct: 99 YPGTTERVCLIQGTVEALNGVHN---FIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVK 155
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V ISGE
Sbjct: 156 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQ 212
Query: 201 VKKALCQIASRLHDNPSRSQHL 222
+KA+ I ++ ++P S L
Sbjct: 213 NRKAVEIIVQKIQEDPQSSSCL 234
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 56 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 115
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I VR P+ ++K E S L TT +L+VP S G +IGKG
Sbjct: 116 L--NGVHNFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKG 173
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V ISG+ + + A+ ++ +++
Sbjct: 174 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEIIVQKIQ 225
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 383 ATNGYLSAASPLVASSLLATEKLAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGA 442
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 443 RIQISKKGEFIPGTRNRK---VTITGSQAATQAAQYLISQRI 481
>gi|224113143|ref|XP_002316405.1| predicted protein [Populus trichocarpa]
gi|222865445|gb|EEF02576.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 128/285 (44%), Gaps = 37/285 (12%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + ++I++ E PG+ +R++
Sbjct: 35 TYTRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRII--------- 85
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAE---ELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
VS D + K + +IA+ E+ ++ + ++ +L+VP+ G +IG
Sbjct: 86 --------MVSGGIDDVLKAVELIIAKLLSEIPAEDGDEAEPRMRVRLVVPNSACGSIIG 137
Query: 157 KGGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
KGG I+++ E+ A I+I L + +D LV ++G A+ I S+L D
Sbjct: 138 KGGSIIKSFIEESHAGIKISPLDTKFFG----LTDRLVTVTGTLEEQMHAIDLILSKLTD 193
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
+P SQ + A S +G + P + + + + +
Sbjct: 194 DPHYSQTMHA-----PFSYAGVFFSGFDGIQYACVLPYVATAAYNSMNHGPNGAAVKFQH 248
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+DD+++ S+ + +IG V+G+GG I +I Q SGA +K+
Sbjct: 249 NKDDITN---SVTIGVADEHIGLVVGRGGRNIMEISQTSGARLKI 290
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 87/193 (45%), Gaps = 14/193 (7%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE----GDDCLITVSSKEFFEDT 342
R + A G VIGKGGA I + +SGA I++ S + E D +I VS +D
Sbjct: 38 RFLVSNAAAGSVIGKGGATITDFQSQSGARIQL-SRNYEFFPGTSDRIIMVSGG--IDDV 94
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
L A + +L + + D RL+VP S G +IGKGGSII + A
Sbjct: 95 LKAVELIIAKLLSEIPAE-DGDEAEPRMRVRLVVPNSACGSIIGKGGSIIKSFIEESHAG 153
Query: 403 IRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPY 462
I+I P + K D +V ++G L+ A+ ++++L D T Y
Sbjct: 154 IKISPLDT--KFFGLTDRLVTVTGTLEEQMHAIDLILSKLT----DDPHYSQTMHAPFSY 207
Query: 463 IPVSENGSDGLNY 475
V +G DG+ Y
Sbjct: 208 AGVFFSGFDGIQY 220
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 79/196 (40%), Gaps = 63/196 (32%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
+ LV + G VIGKGG + + +S++GA+I++ ++ E P SD ++ +SG V
Sbjct: 38 RFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGT---SDRIIMVSGGIDDV 94
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
KA+ I IA L+ G
Sbjct: 95 LKAVELI----------------------------------------IAKLLSEIPAEDG 114
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D A PR +RLV P + G +IGKGG+II +ES A IK+
Sbjct: 115 DEA---------EPR-------MRVRLVVPNSACGSIIGKGGSIIKSFIEESHAGIKISP 158
Query: 322 SSTEG---DDCLITVS 334
T+ D L+TV+
Sbjct: 159 LDTKFFGLTDRLVTVT 174
>gi|332019831|gb|EGI60292.1| Poly(rC)-binding protein 3 [Acromyrmex echinatior]
Length = 566
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 89/168 (52%), Gaps = 12/168 (7%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
++ + HD + G +T +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 82 KFEEWCSQFHD--VPGSGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 139
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
A I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 140 ASIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 183
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 33/206 (16%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSE-------------KIERDSGLISFTTRLLVPTSRIGC 383
F+ A + + CS+ + R T RL+VP S+ G
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDVPGSGAGGGGGVSRPP----ITLRLIVPASQCGS 122
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
LIGKGGS I E+R +T A+I++ E LP + + V ISG +A+ Q + +
Sbjct: 123 LIGKGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISG----TSEAITQCIYHIC 174
Query: 444 ANLFDREGAVSTFVPVLPYIPVSENG 469
+ + +T +PY P + G
Sbjct: 175 CVMLESPPKGAT----IPYRPKPQVG 196
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 74/188 (39%), Gaps = 65/188 (34%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V ++G +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IVTVTGPTN 70
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I + +
Sbjct: 71 SIFKAFTLICKKFEE--------------------------------------------- 85
Query: 260 KGDTAGDWSRSLYSAP------RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
W + P +S +LRL+ P + G +IGKGG+ I +IR+ +
Sbjct: 86 -------WCSQFHDVPGSGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVT 138
Query: 314 GAAIKVDS 321
GA+I+V S
Sbjct: 139 GASIQVAS 146
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 372 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 429
Query: 431 AKDA--LIQVMTRL-RANL 446
A LI + L +ANL
Sbjct: 430 VALAQYLINMSVELQKANL 448
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 372 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 429
Query: 201 VKKA 204
V A
Sbjct: 430 VALA 433
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 110 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 164
>gi|115496720|ref|NP_001070027.1| insulin-like growth factor 2 mRNA-binding protein 1 [Danio rerio]
gi|123908308|sp|Q08CK7.1|IF2B1_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1
gi|115313169|gb|AAI24197.1| Insulin-like growth factor 2 mRNA binding protein 1 [Danio rerio]
gi|182891894|gb|AAI65463.1| Igf2bp1 protein [Danio rerio]
Length = 598
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 195/458 (42%), Gaps = 81/458 (17%)
Query: 3 GQRNSYGKRSHSQTDYADHG-PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
G+R YG R S+ G P+K ++ D R L P + +G+IIG+
Sbjct: 170 GRRPGYGPRGTSRQMSPGSGIPSKHQHA------------DIPLRLLVPTQYVGAIIGKE 217
Query: 62 GEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
G ++ + T+SKI + + G+ E+ ++++S + +A
Sbjct: 218 GATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEGCSAA------------------ 259
Query: 121 DRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI--LK 177
R+I E + + +D+ +V K+L ++ +G +IGK G+ ++ + +T +I I L+
Sbjct: 260 CRMILEIMNQEAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQ 319
Query: 178 DEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSRSQHLLASAISNSHSSS 234
D L + + + G A +I ++ +DN +A+ +H
Sbjct: 320 DLTL----YNPERTITVKGSIEACCLAEQEIMKKVREAYDND------IAAMNQQTHLIP 369
Query: 235 GSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL-SSKEFSLRLVCPVA 293
G +G +G + S+ P + +S++ ++ + P
Sbjct: 370 GLNLG------------AIGLFPPSSAMPPPALGNSVPGPPYGPMGASEQETVHVYIPAQ 417
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL 353
+G +IGK G I Q+ + +GA+IK+ + + + ++ EA +
Sbjct: 418 AVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVI---------VTGPPEAQFKA 468
Query: 354 QPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK 408
Q R K++ ++ + T + V + G +IGKGG + E++ LT A + ++P+
Sbjct: 469 QGRIYGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEV-VVPR 527
Query: 409 ENLPKIASEDDEMVQISGDL---DLAKDALIQVMTRLR 443
E P D +V+I G LA+ + ++T+++
Sbjct: 528 EQTPD--EHDQVIVKIIGHFYASQLAQRKIRDILTQVK 563
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ LRL+ P +G +IGK GA I I +++ + I V G + K +
Sbjct: 198 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAG------AAEKPISIHS 251
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLI-SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
A R+ + +D+ ++L + +G LIGK G + ++ + T
Sbjct: 252 TPEGCSAACRMILEIMNQEAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDT 311
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
I I P ++L E + + G ++ A ++M ++R + A++ ++P
Sbjct: 312 KITISPLQDLTLYNPE--RTITVKGSIEACCLAEQEIMKKVREAYDNDIAAMNQQTHLIP 369
Query: 462 YIPVSENGSDGLNYESRDSKRHGR-----GPPYGGYGSSD 496
+ + G+ GL S GPPYG G+S+
Sbjct: 370 GLNL---GAIGLFPPSSAMPPPALGNSVPGPPYGPMGASE 406
>gi|6753518|ref|NP_034081.1| insulin-like growth factor 2 mRNA-binding protein 1 [Mus musculus]
gi|81908461|sp|O88477.1|IF2B1_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1
gi|3273749|gb|AAC72743.1| coding region determinant binding protein [Mus musculus]
gi|12851514|dbj|BAB29071.1| unnamed protein product [Mus musculus]
gi|148684057|gb|EDL16004.1| insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 172/391 (43%), Gaps = 55/391 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+ S + L +H +D+ +V K+L ++ +G +IGK
Sbjct: 253 CS---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
G+ ++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE-- 349
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
++ +A+ SH G + AA + + P A +S S AP
Sbjct: 350 -AYENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPE 404
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
++ +++ P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 405 QEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV--- 455
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 456 ------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKT 509
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + ++P++ P E+D+++
Sbjct: 510 VNELQNLTAAEV-VVPRDQTP---DENDQVI 536
>gi|124021196|gb|ABM88866.1| IGF2 mRNA-binding protein 1 [Danio rerio]
Length = 598
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 195/458 (42%), Gaps = 81/458 (17%)
Query: 3 GQRNSYGKRSHSQTDYADHG-PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
G+R YG R S+ G P+K ++ D R L P + +G+IIG+
Sbjct: 170 GRRPGYGPRGTSRQMSPGSGIPSKHQHA------------DIPLRLLVPTQYVGAIIGKE 217
Query: 62 GEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
G ++ + T+SKI + + G+ E+ ++++S + +A
Sbjct: 218 GATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEGCSAA------------------ 259
Query: 121 DRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI--LK 177
R+I E + + +D+ +V K+L ++ +G +IGK G+ ++ + +T +I I L+
Sbjct: 260 CRMILEIMNQEAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQ 319
Query: 178 DEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSRSQHLLASAISNSHSSS 234
D L + + + G A +I ++ +DN +A+ +H
Sbjct: 320 DLTL----YNPERTITVKGSIEACCLAEQEIMKKVREAYDND------IAAMNQQTHLIP 369
Query: 235 GSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL-SSKEFSLRLVCPVA 293
G +G +G + S+ P + +S++ ++ + P
Sbjct: 370 GLNLG------------AIGLFPPSSAMPPPALGNSVPGPPYGPMGASEQETVHVYIPAQ 417
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL 353
+G +IGK G I Q+ + +GA+IK+ + + + ++ EA +
Sbjct: 418 AVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVI---------VTGPPEAQFKA 468
Query: 354 QPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK 408
Q R K++ ++ + T + V + G +IGKGG + E++ LT A + ++P+
Sbjct: 469 QGRIYGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEV-VVPR 527
Query: 409 ENLPKIASEDDEMVQISGDL---DLAKDALIQVMTRLR 443
E P D +V+I G LA+ + ++T+++
Sbjct: 528 EQTPD--EHDQVIVKIIGHFYASQLAQRKIRDILTQVK 563
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ LRL+ P +G +IGK GA I I +++ + I V G + K +
Sbjct: 198 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAG------AAEKPISIHS 251
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLI-SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
A R+ + +D+ ++L + +G LIGK G + ++ + T
Sbjct: 252 TPEGCSAACRMILEIMNQEAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDT 311
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
I I P ++L E + + G ++ A ++M ++R + A++ ++P
Sbjct: 312 KITISPLQDLTLYNPE--RTITVKGSIEACCLAEQEIMKKVREAYDNDIAAMNQQTHLIP 369
Query: 462 YIPVSENGSDGLNYESRDSKRHGR-----GPPYGGYGSSD 496
+ + G+ GL S GPPYG G+S+
Sbjct: 370 GLNL---GAIGLFPPSSAMPPPALGNSVPGPPYGPMGASE 406
>gi|126308261|ref|XP_001367379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Monodelphis domestica]
Length = 577
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 169/382 (44%), Gaps = 54/382 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGK 157
++ ++I E ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 253 CSSA------------------CKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGK 294
Query: 158 GGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G+ ++ + +T +I I L+D L + + + G KA +I ++ +
Sbjct: 295 EGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCKAEQEIMKKVREA 350
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
++ +A+ SH G + AA + + P A +S S AP
Sbjct: 351 ---YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVSGAAPYS-SFMQAP 403
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 404 EQEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI-- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 456 -------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLP 412
+ E++ LT A + ++P++ P
Sbjct: 509 TVNELQNLTAAEV-VVPRDQTP 529
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|326934067|ref|XP_003213117.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Meleagris gallopavo]
Length = 553
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 165/382 (43%), Gaps = 55/382 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++++S +
Sbjct: 170 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEG 229
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A ++I E ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 230 CSAA------------------CKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGK 271
Query: 158 GGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G+ ++ + +T +I I L+D L + + + G KA +I ++ +
Sbjct: 272 EGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCKAEQEIMKKVREA 327
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
++ +A+ SH G + P A P +G S + P
Sbjct: 328 ---YENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPP-----SSVSGAAPYSSFMPP 379
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ ++ + P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 380 EQE------TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV-- 431
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 432 -------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGK 484
Query: 391 IITEMRRLTKANIRILPKENLP 412
+ E++ LT A + ++P++ P
Sbjct: 485 TVNELQNLTAAEV-VVPRDQTP 505
>gi|395532668|ref|XP_003768391.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Sarcophilus harrisii]
Length = 577
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/382 (21%), Positives = 169/382 (44%), Gaps = 54/382 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGK 157
++ ++I E ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 253 CSSA------------------CKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGK 294
Query: 158 GGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G+ ++ + +T +I I L+D L + + + G KA +I ++ +
Sbjct: 295 EGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCKAEQEIMKKVREA 350
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
++ +A+ SH G + AA + + P A +S S AP
Sbjct: 351 ---YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVSGAAPYS-SFMQAP 403
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
++ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 404 EQEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI-- 455
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 456 -------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLP 412
+ E++ LT A + ++P++ P
Sbjct: 509 TVNELQNLTAAEV-VVPRDQTP 529
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|393905262|gb|EJD73914.1| hypothetical protein LOAG_18700 [Loa loa]
Length = 228
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 20/171 (11%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ G+ +K +R + +KI I + ER+VT+ ++ N
Sbjct: 11 KEVGSIIGKRGDHIKLIRDQSGAKINISDG--SCPERIVTITGSTGTIN----------- 57
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + + + ++L+ +S +T +L+VP+ Q GC+IGKGG ++ IR TGA
Sbjct: 58 --KAFIMICAK-LQQDLQALPNSIPKPPITMRLIVPATQCGCIIGKGGSKIKEIREATGA 114
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
I++ E LPS R+ V ISG A + + I L + P++ L
Sbjct: 115 SIQV-ASEMLPSSTERA---VTISGSADSIVDCMRNICQILLEAPAKGNTL 161
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 82/174 (47%), Gaps = 25/174 (14%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS----KEFFEDTLSATIEAV 350
+G +IGK G I IR +SGA I + S IT S+ K F + A ++
Sbjct: 13 VGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGSTGTINKAFI--MICAKLQQD 70
Query: 351 VRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
++ P K T RL+VP ++ GC+IGKGGS I E+R T A+I++ E
Sbjct: 71 LQALPNSIPKPP-------ITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQVA-SEM 122
Query: 411 LPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIP 464
LP S + V ISG + D+++ M + L + +T LPY P
Sbjct: 123 LP---SSTERAVTISG----SADSIVDCMRNICQILLEAPAKGNT----LPYRP 165
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS----SSTE 325
+ + ++RL+ P G +IGKGG+ I +IR+ +GA+I+V S SSTE
Sbjct: 76 NSIPKPPITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQVASEMLPSSTE 128
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + G IIG+GG +K++R T + I++ E +P S ER VT+ ++D
Sbjct: 85 MRLIVPATQCGCIIGKGGSKIKEIREATGASIQVASEMLPSSTERAVTISGSAD 138
>gi|113677906|ref|NP_001038254.1| neuro-oncological ventral antigen 1 [Danio rerio]
gi|213624727|gb|AAI71499.1| Neuro-oncological ventral antigen 1 [Danio rerio]
gi|213627516|gb|AAI71495.1| Neuro-oncological ventral antigen 1 [Danio rerio]
Length = 495
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 108/231 (46%), Gaps = 24/231 (10%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 47 KRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 98
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV- 140
PG+ ERV + + N + F++ + + + + + + ++
Sbjct: 99 YPGTTERVCLIQGTVEALNGVHN---FIAEKVREMPQSSQKTEPVSILQPQTTVNPDRIK 155
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 156 QAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQ 212
Query: 201 VKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
+KA+ I ++ ++P S L + ++NS+ + T P
Sbjct: 213 NRKAVEIIVQKIQEDPQSSSCLNISYSNITGPVANSNPTGSPFANSTEVLP 263
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 41/186 (22%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E+ L+++ P G +IGKGG I Q+++E+GA IK+ SK+F+ T
Sbjct: 56 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS-------------KSKDFYPGT 102
Query: 343 ------LSATIEAV----------VRLQPRCSEKIERDSGLISFTT---------RLLVP 377
+ T+EA+ VR P+ S+K E S L TT +L+VP
Sbjct: 103 TERVCLIQGTVEALNGVHNFIAEKVREMPQSSQKTEPVSILQPQTTVNPDRIKQAKLIVP 162
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQ 437
S G +IGKGG+ + + + A +++ K P+ + + +V +SG+ + + A+
Sbjct: 163 NSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQNRKAVEI 219
Query: 438 VMTRLR 443
++ +++
Sbjct: 220 IVQKIQ 225
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Query: 112 AQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
A + ++A L G E ++GG +V ++ VP + +G ++GKGG+ + + TG
Sbjct: 382 ASNGYLNPSSPLVASSLLGTEKLAEGGKEVV-EIAVPENLVGAILGKGGKTLVEYQELTG 440
Query: 171 AQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
A+I+I K E +P R V I+G + + A I+ R+
Sbjct: 441 ARIQISKKGEFIPGTRNRK---VTITGSPAATQAAQYLISQRI 480
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDTI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGTPEAIIQCVKQICVVMLESPPK 174
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 71/222 (31%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 60 IVTITGPTDTIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV--- 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+ +GA ++V D L + + T+S T EA+++
Sbjct: 127 ESTGAQVQV------AGDMLPNSTERAV---TISGTPEAIIQ 159
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDTIFKAFA 75
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 76 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 122
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
EMR T A +++ + LP + + V ISG +A+IQ + ++ + +
Sbjct: 123 KEMRESTGAQVQVA-GDMLP---NSTERAVTISG----TPEAIIQCVKQICVVMLESPPK 174
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 175 GAT----IPYRP 182
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 267 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 301
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 12/168 (7%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 24 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 78
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
++ + HD I G +T +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 79 KFEEWCSQFHD--IQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 136
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
A I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 137 ASIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 180
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 8 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 67
Query: 337 EFFEDTLSATIEAVVRLQPRCSE------KIERDSGLIS---FTTRLLVPTSRIGCLIGK 387
F+ A + + CS+ G +S T RL+VP S+ G LIGK
Sbjct: 68 SIFK----AFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGK 123
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
GGS I E+R +T A+I++ E LP + + V ISG +A+ Q + + +
Sbjct: 124 GGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISG----TSEAITQCIYHICCVML 175
Query: 448 DREGAVSTFVPVLPYIPVSENG 469
+ +T +PY P + G
Sbjct: 176 ESPPKGAT----IPYRPKPQVG 193
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 275 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 332
Query: 431 AKDA--LIQVMTRL-RANL 446
A LI + L +ANL
Sbjct: 333 VALAQYLINMSVELQKANL 351
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 275 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 332
Query: 201 VKKA 204
V A
Sbjct: 333 VALA 336
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 107 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 161
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V
Sbjct: 8 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIV 60
Query: 193 QISGEASVVKKALCQIASRLHD 214
++G + + KA I + +
Sbjct: 61 TVTGPTNSIFKAFTLICKKFEE 82
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ +
Sbjct: 71 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEM 125
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 126 RESTGAQVQVAGD-MLPNSTERA---VTISGTPEAIIQCVKQICVVMLESPPK 174
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 96/222 (43%), Gaps = 71/222 (31%)
Query: 133 DSDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R
Sbjct: 7 QSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER--- 59
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 60 IVTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV--- 100
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+LRLV P + G +IGKGG+ I ++R
Sbjct: 101 ----------------------------------TLRLVVPASQCGSLIGKGGSKIKEMR 126
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+ +GA ++V D L + + T+S T EA+++
Sbjct: 127 ESTGAQVQV------AGDMLPNSTERAV---TISGTPEAIIQ 159
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 16 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 75
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 76 MIAYKFEEDIINSMSNSPATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 122
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
EMR T A +++ + LP + + V ISG +A+IQ + ++ + +
Sbjct: 123 KEMRESTGAQVQVA-GDMLP---NSTERAVTISG----TPEAIIQCVKQICVVMLESPPK 174
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 175 GAT----IPYRP 182
>gi|351713542|gb|EHB16461.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Heterocephalus
glaber]
Length = 577
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/390 (22%), Positives = 173/390 (44%), Gaps = 57/390 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ R+I E + + +D+ +V K+L ++ +G +IGK G
Sbjct: 255 SA------------------CRMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEG 296
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
+ ++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 297 RNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEITKKVREA-- 350
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
++ +A+ SH G + AA + + P A +S S AP
Sbjct: 351 -YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVSGAAPYS-SFMQAPEQ 405
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
++ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 406 EM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI---- 455
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSII 392
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 -----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTV 510
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D++V
Sbjct: 511 NELQNLTAAEV-VVPRDQTP---DENDQVV 536
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 13/171 (7%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S+ ++RL+ +G +IGK G I+ + R+ESGA I + S +T S+
Sbjct: 8 NDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGSTN 67
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSG-----LISFTTRLLVPTSRIGCLIGKGGSI 391
F+ A + + CS+ + +SG T RL+VP S+ G LIGKGGS
Sbjct: 68 AIFK----AFTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSK 123
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
I E+R +T A+I++ E LP + + V ISG + + + T +
Sbjct: 124 IKEIREVTGASIQVA-SEMLP---NSTERAVTISGTGEAITQCIYHICTVM 170
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 32/176 (18%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GEIVK+ R ++ +KI I + ER+VTV +++
Sbjct: 24 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGSTN-------------- 67
Query: 112 AQDALFKVHDRV---IAEELRGDEDSDGG------HQVTAKLLVPSDQIGCVIGKGGQIV 162
A+FK + E +D + G +T +L+VP+ Q G +IGKGG +
Sbjct: 68 ---AIFKAFTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKI 124
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
+ IR TGA I++ E LP+ R+ V ISG + + + I + + ++P +
Sbjct: 125 KEIREVTGASIQV-ASEMLPNSTERA---VTISGTGEAITQCIYHICTVMLESPPK 176
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 83/189 (43%), Gaps = 57/189 (30%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V
Sbjct: 8 NDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIV 60
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I + + S+ Q + +S GS V
Sbjct: 61 TVTGSTNAIFKAFTLICKKFEEWCSQFQDI---------NSGGSGV-------------- 97
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
PR + +LRL+ P + G +IGKGG+ I +IR+
Sbjct: 98 ----------------------PRPPI-----TLRLIVPASQCGSLIGKGGSKIKEIREV 130
Query: 313 SGAAIKVDS 321
+GA+I+V S
Sbjct: 131 TGASIQVAS 139
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI ++ + + D + ISG+ D
Sbjct: 320 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDD--RESGVTDRTITISGNPDA 377
Query: 431 AKDALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 378 V--ALAQYLINMRISM 391
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ +Q T ++ VP++ IGC+IGKGG + IR +GA IRI + S +D +
Sbjct: 312 NQQNSNQQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGV--TDRTI 369
Query: 193 QISGEASVVKKALCQIASRL 212
ISG V A I R+
Sbjct: 370 TISGNPDAVALAQYLINMRI 389
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV 92
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+
Sbjct: 105 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTI 152
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 88/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ G+ IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGSNINEIRQMSGAQIKI 315
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|281360685|ref|NP_001162717.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|272506050|gb|ACZ95252.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|383873394|gb|AFH55503.1| FI20063p1 [Drosophila melanogaster]
Length = 580
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 191/426 (44%), Gaps = 70/426 (16%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 61 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 120
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + + +V + +G E S
Sbjct: 121 HRKENV-GSLEKSITIYGNPENCTNACKR-----------ILEVMQQEAISTNKG-ELSP 167
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 168 ECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 225
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 226 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 269
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 270 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 326
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 327 TRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 381
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 382 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 439
Query: 415 ASEDDE 420
+ D+E
Sbjct: 440 SGGDEE 445
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 309 QETTYLYI-PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 367
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 368 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 410
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 411 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 470
Query: 214 DNP 216
NP
Sbjct: 471 TNP 473
>gi|241956872|ref|XP_002421156.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223644499|emb|CAX41315.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 533
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/342 (22%), Positives = 125/342 (36%), Gaps = 88/342 (25%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R CP+++ +I+GR GE + LR +I + E + G ER+V V
Sbjct: 163 RMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVK------------ 210
Query: 106 DKFVSPAQDA--LFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
PA++ F + RVI EE + S Q KLL+P IG +IGK G +
Sbjct: 211 ----GPAENVARAFGLITRVILEEPEDEPASITSQQYNLKLLIPHPMIGFIIGKQGLKFR 266
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL----------- 212
I + A+++ ++ LP +D ++ + G + A+ IA +
Sbjct: 267 EIEENSAAKLKAAENP-LPYS---TDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKNK 322
Query: 213 -------------HDN-----------------------------PSRSQH--------- 221
H N P SQH
Sbjct: 323 VVLYNPANYQPTDHQNLGGRQRHPPNNSYNNPMGYQAKLPPFSKPPHHSQHQQSPYNFSM 382
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMG--PYGGYKGDTAGDWSRSLYSAPRDDL 279
+ A+ H + P A +P VG+ P + P Y + + + P
Sbjct: 383 MFQPAVQPQHFGTPVTSNPNAISP-VGMQPSINVPPQNQYTDEFGNTIVGEVITTPPVQA 441
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA-IKVD 320
+++ + ++IG VIGKGG I IR+ S +K++
Sbjct: 442 GQDKYNQDVFVANSSIGSVIGKGGNNIKHIRETSACTYVKIE 483
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
RDD + LR+ CPV ++G+ G IN +R+++ I V + + ++ V
Sbjct: 154 RDDPTF--IQLRMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVKG 211
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGKGGSII 392
+ ++ + R+ E+ E + I+ + +LL+P IG +IGK G
Sbjct: 212 P---AENVARAFGLITRV---ILEEPEDEPASITSQQYNLKLLIPHPMIGFIIGKQGLKF 265
Query: 393 TEMRRLTKANIR 404
E+ + A ++
Sbjct: 266 REIEENSAAKLK 277
>gi|322796009|gb|EFZ18633.1| hypothetical protein SINV_09712 [Solenopsis invicta]
Length = 440
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 89/168 (52%), Gaps = 12/168 (7%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
++ + HD I G +T +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 82 KFEEWCSQFHD--IQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTG 139
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
A I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 140 ASIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 183
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 93/202 (46%), Gaps = 25/202 (12%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSE------KIERDSGLIS---FTTRLLVPTSRIGCLIGK 387
F+ A + + CS+ G +S T RL+VP S+ G LIGK
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGK 126
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
GGS I E+R +T A+I++ E LP + + V ISG +A+ Q + + +
Sbjct: 127 GGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISG----TSEAITQCIYHICCVML 178
Query: 448 DREGAVSTFVPVLPYIPVSENG 469
+ +T +PY P + G
Sbjct: 179 ESPPKGAT----IPYRPKPQVG 196
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 372 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 429
Query: 431 AKDALIQVMTRLR 443
AL Q + +R
Sbjct: 430 V--ALAQYLINMR 440
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 372 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 429
Query: 201 VKKA 204
V A
Sbjct: 430 VALA 433
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 111 LRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 164
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ D +T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IV 63
Query: 193 QISGEASVVKKALCQIASRLHD 214
++G + + KA I + +
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEE 85
>gi|345780248|ref|XP_003431966.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Canis lupus familiaris]
Length = 441
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 149/319 (46%), Gaps = 42/319 (13%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
++ K+L ++ +G +IGK G+ ++ I +T +I I + L + + + G
Sbjct: 137 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNV 194
Query: 199 SVVKKALCQIASRL---HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
KA +I ++ ++N S +L A I + ++ L PT+ P
Sbjct: 195 ETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMP---------- 244
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
T+G S P+ + + + ++ L P ++G +IGK G I Q+ + +GA
Sbjct: 245 -----PPTSGPPSAMTPPYPQFEQAPQTETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 299
Query: 316 AIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISF 370
+IK+ + E D + + ++ EA + Q R KI+ ++ + +
Sbjct: 300 SIKI--APAEAPDAKVRMV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKL 350
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL- 428
+ VP+ G +IGKGG + E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 351 EAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFY 406
Query: 429 --DLAKDALIQVMTRLRAN 445
+A+ + +++T+++ +
Sbjct: 407 ACQVAQRKIQEILTQVKQH 425
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 41/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF P+ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 260 QFEQAPQTETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 319
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H R V
Sbjct: 320 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIR-----------------------V 356
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V +++ + A++ + +D+ +D+ +V+I+G
Sbjct: 357 PSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 407
Query: 206 CQIASR 211
CQ+A R
Sbjct: 408 CQVAQR 413
>gi|340728851|ref|XP_003402727.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
terrestris]
Length = 738
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 177/419 (42%), Gaps = 87/419 (20%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF 108
P +G IIGRGGE + +L+ +T KI++ G ER+ T+ + + N ++
Sbjct: 114 VPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERLCTLTGSREAVNRAKE---- 169
Query: 109 VSPAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
L V+ R E + S GG H ++++P ++G +IGKGG+ ++ +
Sbjct: 170 -----LVLSIVNQRSRTEGIGDMGGSSGGLMSHSGFVEIMIPGPKVGLIIGKGGETIKQL 224
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ ++GA++ ++++ + ++ ++I+G+ V+ A + L+
Sbjct: 225 QEKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYA---------------KQLVYE 265
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFS 285
I+ M G D +G++S + + S
Sbjct: 266 LIAEKEMQ-------------------MFHRGARGNDRSGNYSN---DSSFNHGSGTTDG 303
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSK--EFFE 340
+ ++ P A +G VIGKGG +I +I+ E+GA ++ +G C+++ + E
Sbjct: 304 VEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCIVSGKHQAVEQVR 363
Query: 341 DTLSATIEAVVR----------------------LQPRCSEKIERDSG---LISFTTRLL 375
+ I++V+R P +R G T
Sbjct: 364 QRIQELIDSVMRRDDGRSNIGARSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETMFT 423
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
VP+S+ G +IGKGG I ++ + T A+ L + N ++E++++ I G+ + + A
Sbjct: 424 VPSSKCGIIIGKGGETIKQINQQTGAHCE-LDRRNQ---SNENEKIFIIRGNPEQVEHA 478
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 132/306 (43%), Gaps = 46/306 (15%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
+ P K+G IIG+GGE +KQL+ + +K+ + + P E+ + + +
Sbjct: 204 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 263
Query: 108 FVSPAQDALFKVHDRVIAEELRGDEDSDG------GHQVTAKLLVPSDQIGCVIGKGGQI 161
+ A+ + H + G+ +D G ++LVP +G VIGKGG +
Sbjct: 264 YELIAEKEMQMFHRGARGNDRSGNYSNDSSFNHGSGTTDGVEVLVPRAAVGVVIGKGGDM 323
Query: 162 VQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ I++ETGA+++ + E P D +SG+ V+ Q+ R+ Q
Sbjct: 324 IKKIQAETGARVQFQQGREDGP-----GDRKCIVSGKHQAVE----QVRQRI-------Q 367
Query: 221 HLLASAI--SNSHSSSGSLVGPTAATPIVGIAPLMGP--YGGYKGDTAGDWSRSLYSAPR 276
L+ S + + S+ G+ GP G P YGG W R P
Sbjct: 368 ELIDSVMRRDDGRSNIGARSGPRGN----GFGNNRNPNEYGG--------WDRR-QGGPM 414
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD--SSSTEGDDCLITVS 334
D F++ P + G +IGKGG I QI Q++GA ++D + S E + I
Sbjct: 415 QDKIETMFTV----PSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNENEKIFIIRG 470
Query: 335 SKEFFE 340
+ E E
Sbjct: 471 NPEQVE 476
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 87/183 (47%), Gaps = 29/183 (15%)
Query: 291 PVANIGGV---------------IGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
P+ N+GG+ IG+GG I +++ E+G I++ S + L T++
Sbjct: 100 PIGNVGGICNEDIRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERLCTLTG 159
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIE----RDSGLISFT--TRLLVPTSRIGCLIGKGG 389
+ + ++V + R +E I GL+S + +++P ++G +IGKGG
Sbjct: 160 SREAVNRAKELVLSIVNQRSR-TEGIGDMGGSSGGLMSHSGFVEIMIPGPKVGLIIGKGG 218
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD---LDLAKDALIQVMTRLRANL 446
I +++ + A + ++ + + E ++ ++I+GD ++ AK + +++ +
Sbjct: 219 ETIKQLQEKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYAKQLVYELIAEKEMQM 274
Query: 447 FDR 449
F R
Sbjct: 275 FHR 277
>gi|410952458|ref|XP_003982897.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 3 [Felis catus]
Length = 441
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 149/319 (46%), Gaps = 42/319 (13%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
++ K+L ++ +G +IGK G+ ++ I +T +I I + L + + + G
Sbjct: 137 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNV 194
Query: 199 SVVKKALCQIASRL---HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
KA +I ++ ++N S +L A I + ++ L PT+ P
Sbjct: 195 ETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMP---------- 244
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
T+G S P+ + + + ++ L P ++G +IGK G I Q+ + +GA
Sbjct: 245 -----PPTSGPPSAMTPPYPQFEQAPETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 299
Query: 316 AIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISF 370
+IK+ + E D + + ++ EA + Q R KI+ ++ + +
Sbjct: 300 SIKI--APAEAPDAKVRMV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKL 350
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL- 428
+ VP+ G +IGKGG + E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 351 EAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFY 406
Query: 429 --DLAKDALIQVMTRLRAN 445
+A+ + +++T+++ +
Sbjct: 407 ACQVAQRKIQEILTQVKQH 425
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 41/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF PE P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 260 QFEQAPETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 319
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H R V
Sbjct: 320 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIR-----------------------V 356
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V +++ + A++ + +D+ +D+ +V+I+G
Sbjct: 357 PSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 407
Query: 206 CQIASR 211
CQ+A R
Sbjct: 408 CQVAQR 413
>gi|307211366|gb|EFN87498.1| Far upstream element-binding protein 1 [Harpegnathos saltator]
Length = 751
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 99/453 (21%), Positives = 191/453 (42%), Gaps = 97/453 (21%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFV 109
P + +G IIGRGGE + +L+ +T KI++ G ERV T+ + + N ++
Sbjct: 110 PDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERVCTLTGSREAVNRAKE----- 164
Query: 110 SPAQDALFKVHDRVIAEELRGDEDSDGGHQVT-----AKLLVPSDQIGCVIGKGGQIVQN 164
L V+ R +E + GG + ++++P ++G +IGKGG+ ++
Sbjct: 165 ----LVLSIVNQRSRSEGIGDMNMGGGGGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQ 220
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
++ ++GA++ ++++ + ++ ++I+G+ V+ A + L+
Sbjct: 221 LQEKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEHA---------------KQLVY 261
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEF 284
I+ G + P G Y D P ++
Sbjct: 262 ELIAEKEMQMFHRGGRGSERP-----------GNYTNDNG------FNHGPANN-----D 299
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSK--EFF 339
+ ++ P A +G VIGKGG +I +I+ ESGA ++ +G CL++ + E
Sbjct: 300 GVEVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREDGPGDRKCLLSGKHQAVEQA 359
Query: 340 EDTLSATIEAVVR----------------------LQPRCSEKIERDSG---LISFTTRL 374
+ I++V+R P +R G T
Sbjct: 360 RQRIQELIDSVMRRDDGRNNMGGRGGPRGNGFGGSRNPNEYGSWDRRQGGPMQDKIETTF 419
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD---LDLA 431
VP+S+ G +IGKGG I ++ + T A+ L + N ++E++++ I G+ ++ A
Sbjct: 420 TVPSSKCGIIIGKGGETIKQINQQTGAHCE-LDRRNQ---SNENEKIFIIRGNPEQVEHA 475
Query: 432 KDALIQVMTRLRANLFDREGAVSTFVPVLPYIP 464
K + + + +F VST V + P+IP
Sbjct: 476 KRIFSEKLGMVCLMMF-----VSTEVLLAPHIP 503
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 126/304 (41%), Gaps = 42/304 (13%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
+ P K+G IIG+GGE +KQL+ + +K+ + + P E+ + + E +
Sbjct: 201 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQE--KPLRITGDPQKVEHAKQ 258
Query: 108 FVSP--AQDALFKVHDRVIAEELRGDEDSDGG------HQVTAKLLVPSDQIGCVIGKGG 159
V A+ + H E G+ +D G + ++LVP +G VIGKGG
Sbjct: 259 LVYELIAEKEMQMFHRGGRGSERPGNYTNDNGFNHGPANNDGVEVLVPRAAVGVVIGKGG 318
Query: 160 QIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
+++ I++E+GA+++ + E P D +SG+ V++A R
Sbjct: 319 DMIKKIQAESGAKVQFQQGREDGP-----GDRKCLLSGKHQAVEQAR-----------QR 362
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
Q L+ S + + G + Y G W R P D
Sbjct: 363 IQELIDSVMRRDDGRNNMGGRGGPRGNGFGGSRNPNEY--------GSWDRR-QGGPMQD 413
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD--SSSTEGDDCLITVSSK 336
F++ P + G +IGKGG I QI Q++GA ++D + S E + I +
Sbjct: 414 KIETTFTV----PSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNENEKIFIIRGNP 469
Query: 337 EFFE 340
E E
Sbjct: 470 EQVE 473
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 124/274 (45%), Gaps = 37/274 (13%)
Query: 198 ASVVKKALCQIASRLHDNPSRSQH----LLASAISNSHSSSGSLVGPTAATPIVGIAPLM 253
A+ +++A QIA+++ NP+ +Q+ L + +S + A P++GI
Sbjct: 20 AAALQRAK-QIAAKI--NPAGAQNNQDSKLKRPLEDSSEPEAKKMAALVADPLIGI---- 72
Query: 254 GPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVC------PVANIGGVIGKGGAIIN 307
GG +++ S S S P+ S+ + +C P +G +IG+GG I
Sbjct: 73 --RGGPGANSSIGDSGSQSSRPQTSSSN----VGGICNEDIRVPDKMVGLIIGRGGEQIT 126
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL 367
+++ E+G I++ S + + T++ + + ++V + R + + G
Sbjct: 127 RLQSETGCKIQMAPESGGLPERVCTLTGSREAVNRAKELVLSIVNQRSRSEGIGDMNMGG 186
Query: 368 ISFT-------TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
+++P ++G +IGKGG I +++ + A + ++ + + E ++
Sbjct: 187 GGGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQE----GPSQEQEK 242
Query: 421 MVQISGD---LDLAKDALIQVMTRLRANLFDREG 451
++I+GD ++ AK + +++ +F R G
Sbjct: 243 PLRITGDPQKVEHAKQLVYELIAEKEMQMFHRGG 276
>gi|326430629|gb|EGD76199.1| hypothetical protein PTSG_00905 [Salpingoeca sp. ATCC 50818]
Length = 947
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 161/378 (42%), Gaps = 65/378 (17%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIGETVP---GSEERVVTVYSASDETNAFEDGDKFVS 110
+G+IIGRGG ++QL +++++ + P RV S ++ AF
Sbjct: 197 VGAIIGRGGANIRQLSQVSRARVELERRDPHLGAVGRRVFIDGSLNNTVEAFR------- 249
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSET 169
A L +D EL G+E + ++T+ ++++P + +G +IG+ G ++ I +
Sbjct: 250 -ALVQLMADND----VELNGEEPVEAEDRITSIQMMIPGEMVGHLIGRAGASIKYITETS 304
Query: 170 GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISN 229
GA I +L ++ + +V+I G + A + + + RS ++
Sbjct: 305 GAGIELLPLQY--PANMSPVRIVKIEGTPRQLTHAFALMLRKFSNAMRRSMEVMRGPPMM 362
Query: 230 SHSSSGSLVGPTAATPIV-GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRL 288
P A P V G P GP + AP + ++ +
Sbjct: 363 GMMQQQQQQMPGMAPPYVPGYGP--GP---------------MMMAPVEVITVR------ 399
Query: 289 VCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFED--TLSAT 346
P ++G +IG+GG+ I + +E+GA I++ +S GDD +E E + T
Sbjct: 400 -VPAWSVGALIGRGGSNIKHMMEETGAEIRIQNS---GDDV------EEPLERDCVVRGT 449
Query: 347 IEAVVRLQPRCSEKIERDSGLIS-----------FTTRLLVPTSRIGCLIGKGGSIITEM 395
E VR +++ + ++ F + VP +++G +IG+GG+ I ++
Sbjct: 450 TEQQVRAHALIFRRMQDEQARLNIPPTDPRSNDLFPVVMEVPAAKVGRVIGRGGATIRDI 509
Query: 396 RRLTKANIRILPKENLPK 413
++ T + + E P+
Sbjct: 510 QQKTGVGVEVQQNEENPE 527
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 18/158 (11%)
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
+ G GD R+ PR D++ F ++LV + +G +IG+GGA I Q+ Q S A ++
Sbjct: 164 FTGIRFGDTRRA--RKPRPDMALP-FPVQLVVRPSLVGAIIGRGGANIRQLSQVSRARVE 220
Query: 319 VDSSSTEGDDCLITVSSKEFFEDTLSATIE---AVVRL------QPRCSEKIERDSGLIS 369
++ D L V + F + +L+ T+E A+V+L + E +E + + S
Sbjct: 221 LERR----DPHLGAVGRRVFIDGSLNNTVEAFRALVQLMADNDVELNGEEPVEAEDRITS 276
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
++++P +G LIG+ G+ I + + A I +LP
Sbjct: 277 I--QMMIPGEMVGHLIGRAGASIKYITETSGAGIELLP 312
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSEERVVTVYSASDETNAFEDG 105
P +G++IGRGG +K + +T ++IRI G+ V ER V +++
Sbjct: 400 VPAWSVGALIGRGGSNIKHMMEETGAEIRIQNSGDDVEEPLERDCVVRGTTEQQ------ 453
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGD---EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
A +F+ R+ E+ R + D + VP+ ++G VIG+GG +
Sbjct: 454 ----VRAHALIFR---RMQDEQARLNIPPTDPRSNDLFPVVMEVPAAKVGRVIGRGGATI 506
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
++I+ +TG + + ++E P ++ V + G V+ AL
Sbjct: 507 RDIQQKTGVGVEVQQNEENPE----ANAAVMLHGSYRSVQAAL 545
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 23/171 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
++ + HD ++G GG +T +L+VP+ Q G +IGKGG ++ IR
Sbjct: 82 KFEEWCSQFHD------IQGS----GGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 131
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA I++ D LP+ R+ V ISG + + + + I + ++P +
Sbjct: 132 VTGASIQVASD-MLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 178
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSE--KIERDSGLI--SFTTRLLVPTSRIGCLIGKGGSII 392
F+ A + + CS+ I+ G+ T RL+VP S+ G LIGKGGS I
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R +T A+I++ + LP + + V ISG +A+ Q + + + +
Sbjct: 127 KEIREVTGASIQVA-SDMLP---NSTERAVTISG----TSEAITQCIYHICCVMLESPPK 178
Query: 453 VSTFVPVLPYIPVSENG 469
+T +PY P + G
Sbjct: 179 GAT----IPYRPKPQVG 191
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 90/213 (42%), Gaps = 67/213 (31%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV+ R E+GA+I I SC R +V ++G +
Sbjct: 18 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG----SCPER---IVTVTGPTN 70
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I + + S H GS GG
Sbjct: 71 SIFKAFTLICKKFEE-----------WCSQFHDIQGS--------------------GG- 98
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
PR + +LRL+ P + G +IGKGG+ I +IR+ +GA+I+V
Sbjct: 99 --------------VPRPPI-----TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV 139
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
S D L + + T+S T EA+ +
Sbjct: 140 AS------DMLPNSTERAV---TISGTSEAITQ 163
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 424
Query: 431 AKDA--LIQVMTRL-RANL 446
A LI + L +ANL
Sbjct: 425 VSLAQYLISMSVELQKANL 443
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 424
Query: 201 VKKA 204
V A
Sbjct: 425 VSLA 428
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ + +P S ER VT+ S+
Sbjct: 105 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSE 159
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 141/320 (44%), Gaps = 60/320 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK +R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVK-MREESGARINISEG--NCPERIITLAGPTN-------- 65
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 66 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 115
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA-SRLHDNPS 217
G ++ IR TGAQ+++ D LP+ R+ + I K +C + L +P
Sbjct: 116 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 174
Query: 218 R----------SQHLLASAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGPYGGYK 260
+ S + A +++ G P T + +A P+ G+
Sbjct: 175 KGVTIPYWPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFS 234
Query: 261 G------DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
G + G W+ D S++ S L P IG +IG+ GA IN+IRQ SG
Sbjct: 235 GIESSSPEVKGYWAGL-------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSG 287
Query: 315 AAIKVDSSSTEGDDCLITVS 334
A IK+ + D +T++
Sbjct: 288 AQIKIANPVEGSTDRQVTIT 307
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 89/231 (38%), Gaps = 68/231 (29%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVY---------- 93
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 99 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECV 158
Query: 94 -------------------------SASDETNAFEDGDKFVSPAQDA-----LFKVHDRV 123
S F G + Q A L K+H
Sbjct: 159 KQICVVMLETLSQSPPKGVTIPYWPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLA 218
Query: 124 IAEE----------LRGDEDS-----------DGGHQVTA-KLLVPSDQIGCVIGKGGQI 161
+ + G E S D Q T+ +L +P+D IGC+IG+ G
Sbjct: 219 MQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAK 278
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ IR +GAQI+I +D V I+G A+ + A I RL
Sbjct: 279 INEIRQMSGAQIKIANP-----VEGSTDRQVTITGSAASISLAQYLINVRL 324
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 63/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVK-MREESGARINISEG----NCPER---II 58
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 59 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 92
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 93 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 125
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 126 TGAQVQV 132
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 23/132 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESV-KMREESGARINI----SEGN-CPERI-------ITL 60
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 61 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 120
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 121 EIRESTGAQVQV 132
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 48/295 (16%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV S T+A ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV---SGTTSAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-------- 222
I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 223 ---LASAISNSHSSSGSLVGPT---AATP----IVGIAPLMGP--YGG--YKGDTAGDWS 268
+ A + + G+ PT A P M P GG + A
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAG 253
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
L +A + ++ + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 254 SQLRTANANRAQQQQHEMT----VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 304
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTSAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 271 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSV-- 326
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 327 ALAQYLINMRISM 339
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG S
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTS 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|386764188|ref|NP_001036268.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
gi|383293323|gb|ABI30974.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
Length = 631
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 191/426 (44%), Gaps = 70/426 (16%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 112 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 171
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + + +V + +G E S
Sbjct: 172 HRKENV-GSLEKSITIYGNPENCTNACKR-----------ILEVMQQEAISTNKG-ELSP 218
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 219 ECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 276
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 277 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 320
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 321 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 377
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 378 TRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 432
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 433 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 490
Query: 415 ASEDDE 420
+ D+E
Sbjct: 491 SGGDEE 496
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 360 QETTYLYI-PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 418
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ A + + +++ E D ++T +LLV S Q+G +I
Sbjct: 419 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV---RLTVELLVASSQVGRII 462
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLHD 214
GKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 463 GKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLST 522
Query: 215 NP 216
NP
Sbjct: 523 NP 524
>gi|350412234|ref|XP_003489579.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
impatiens]
Length = 736
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 89/419 (21%), Positives = 177/419 (42%), Gaps = 87/419 (20%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF 108
P +G IIGRGGE + +L+ +T KI++ G ER+ T+ + + N ++
Sbjct: 114 VPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERLCTLTGSREAVNRAKE---- 169
Query: 109 VSPAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
L V+ R E + S GG H ++++P ++G +IGKGG+ ++ +
Sbjct: 170 -----LVLSIVNQRSRTEGIGDMGGSSGGIMSHSGFVEIMIPGPKVGLIIGKGGETIKQL 224
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ ++GA++ ++++ + ++ ++I+G+ V+ A + L+
Sbjct: 225 QEKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYA---------------KQLVYE 265
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFS 285
I+ M G D +G++S + + S
Sbjct: 266 LIAEKEMQ-------------------MFHRGARGNDRSGNYSN---DSSFNHGSGTTDG 303
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSK--EFFE 340
+ ++ P A +G VIGKGG +I +I+ E+GA ++ +G C+++ + E
Sbjct: 304 VEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCIVSGKHQAVEQVR 363
Query: 341 DTLSATIEAVVR----------------------LQPRCSEKIERDSG---LISFTTRLL 375
+ I++V+R P +R G T
Sbjct: 364 QRIQELIDSVMRRDDGRSNIGARSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIETMFT 423
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
VP+S+ G +IGKGG I ++ + T A+ L + N ++E++++ I G+ + + A
Sbjct: 424 VPSSKCGIIIGKGGETIKQINQQTGAHCE-LDRRNQ---SNENEKIFIIRGNPEQVEHA 478
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 131/306 (42%), Gaps = 46/306 (15%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
+ P K+G IIG+GGE +KQL+ + +K+ + + P E+ + + +
Sbjct: 204 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 263
Query: 108 FVSPAQDALFKVHDRVIAEELRGDEDSDG------GHQVTAKLLVPSDQIGCVIGKGGQI 161
+ A+ + H + G+ +D G ++LVP +G VIGKGG +
Sbjct: 264 YELIAEKEMQMFHRGARGNDRSGNYSNDSSFNHGSGTTDGVEVLVPRAAVGVVIGKGGDM 323
Query: 162 VQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ I++ETGA+++ + E P D +SG+ V+ Q+ R+ Q
Sbjct: 324 IKKIQAETGARVQFQQGREDGP-----GDRKCIVSGKHQAVE----QVRQRI-------Q 367
Query: 221 HLLASAI--SNSHSSSGSLVGPTAATPIVGIAPLMGP--YGGYKGDTAGDWSRSLYSAPR 276
L+ S + + S+ G+ GP G P YGG W R +
Sbjct: 368 ELIDSVMRRDDGRSNIGARSGPRGN----GFGNNRNPNEYGG--------WDRRQGGPMQ 415
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD--SSSTEGDDCLITVS 334
D + + P + G +IGKGG I QI Q++GA ++D + S E + I
Sbjct: 416 DKIET-----MFTVPSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNENEKIFIIRG 470
Query: 335 SKEFFE 340
+ E E
Sbjct: 471 NPEQVE 476
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 38/186 (20%), Positives = 84/186 (45%), Gaps = 35/186 (18%)
Query: 291 PVANIGGV---------------IGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
P+ N+GG+ IG+GG I +++ E+G I++ S + L T++
Sbjct: 100 PIGNVGGICNEDIRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERLCTLTG 159
Query: 336 KEFFEDTLSATIEAVVRLQPRC---------SEKIERDSGLISFTTRLLVPTSRIGCLIG 386
+ + ++V + R S I SG + +++P ++G +IG
Sbjct: 160 SREAVNRAKELVLSIVNQRSRTEGIGDMGGSSGGIMSHSGFV----EIMIPGPKVGLIIG 215
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD---LDLAKDALIQVMTRLR 443
KGG I +++ + A + ++ + + E ++ ++I+GD ++ AK + +++
Sbjct: 216 KGGETIKQLQEKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYAKQLVYELIAEKE 271
Query: 444 ANLFDR 449
+F R
Sbjct: 272 MQMFHR 277
>gi|390604812|gb|EIN14203.1| hypothetical protein PUNSTDRAFT_95868 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 330
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 140/321 (43%), Gaps = 54/321 (16%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP+ R L + G IIG+GG+ V LR T K + + VPG +RV+T
Sbjct: 24 GPDTLTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSKVVPGVHDRVLT------- 76
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS----DGGHQVTAKLLVPSDQIGCV 154
+S + D + K + ++A+ + + S + +LL+ + +G +
Sbjct: 77 ----------ISGSVDRVAKAYGLIVAQLVASNPTSPISASSSTHTSLRLLISHNLMGTI 126
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IG+GG ++ I+ +GA++ KD LP R +V++ G +++A+ I L +
Sbjct: 127 IGRGGTRIKAIQDNSGARMVASKD-MLPQSTER---VVEVHGSVEAIERAVDDIGKSLLE 182
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVG----IAPLMGPYGGYKGD-----TAG 265
+ R + L P A G + G YGG + + G
Sbjct: 183 DWERGLGTV-------------LFHPGAGDERSGSSRRYSENRGSYGGSRQSNGRPGSPG 229
Query: 266 DWSRSLYSAPR-DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
SR S+P+ +L ++ S+ P +G +IG+GG+ I +IR+ SG+ I + +
Sbjct: 230 SPSRQAPSSPQPTNLRTQNISI----PSDMVGCIIGRGGSKITEIRRLSGSKISIAKAPH 285
Query: 325 E--GDDCLITVSSKEFFEDTL 343
+ G+ V + E E L
Sbjct: 286 DETGERMFTIVGTPEANEKAL 306
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 90/218 (41%), Gaps = 52/218 (23%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNA 101
T R L +G+IIGRGG +K ++ ++ +++ + +P S ERVV V+ +
Sbjct: 112 TSLRLLISHNLMGTIIGRGGTRIKAIQDNSGARMVASKDMLPQSTERVVEVH------GS 165
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEEL----RGDEDSD------------GGHQV----- 140
E ++ V +L + +R + L GDE S GG +
Sbjct: 166 VEAIERAVDDIGKSLLEDWERGLGTVLFHPGAGDERSGSSRRYSENRGSYGGSRQSNGRP 225
Query: 141 --------------------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
T + +PSD +GC+IG+GG + IR +G++I I K H
Sbjct: 226 GSPGSPSRQAPSSPQPTNLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSKISIAKAPH 285
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
+ + + I G +KAL + ++L R
Sbjct: 286 DET----GERMFTIVGTPEANEKALFLLYNQLESEKER 319
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T + +P+ +GC+IG+GGS ITE+RRL+ + I I
Sbjct: 246 TQNISIPSDMVGCIIGRGGSKITEIRRLSGSKISI 280
>gi|356552330|ref|XP_003544521.1| PREDICTED: uncharacterized protein LOC100813135 [Glycine max]
Length = 670
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 97/181 (53%), Gaps = 23/181 (12%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDGD 106
P ++G IIG+GGE +K L++ + +KI++ + P S R V + + D A +
Sbjct: 129 PNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPD---AIATAE 185
Query: 107 KFVSPAQDALFKVH---DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
K ++ + L + +IA + G SD + +K +P++++G VIGKGG+ ++
Sbjct: 186 KLIN---EVLAEAETGGSGIIARRVAGQAGSD---EYVSK--IPNNKVGLVIGKGGETIK 237
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV---KKALCQIAS--RLHDNPSR 218
N+++ TGA+I+++ HLP ++ ++I G + K+ + Q+ S H NP+
Sbjct: 238 NMQASTGARIQVIP-LHLPPGDTSTERTLKIEGTPEQIESAKQMVNQVISGENRHRNPAM 296
Query: 219 S 219
S
Sbjct: 297 S 297
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLS 344
S ++ P +G +IGKGG I ++ +SGA I+V + + D T + +
Sbjct: 123 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQV-TRDMDADPNSATRTVELMGSPDAI 181
Query: 345 ATIEAVVRLQPRCSEKIERDSGLIS-----------FTTRLLVPTSRIGCLIGKGGSIIT 393
AT E ++ +E SG+I+ + ++ +P +++G +IGKGG I
Sbjct: 182 ATAEKLINE--VLAEAETGGSGIIARRVAGQAGSDEYVSK--IPNNKVGLVIGKGGETIK 237
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISG---DLDLAKDALIQVMT 440
M+ T A I+++P +LP + + ++I G ++ AK + QV++
Sbjct: 238 NMQASTGARIQVIPL-HLPPGDTSTERTLKIEGTPEQIESAKQMVNQVIS 286
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 42/59 (71%), Gaps = 4/59 (6%)
Query: 138 HQV---TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELV 192
HQV + K+ +P+ ++G +IGKGG+ ++ ++ ++GA+I++ +D + P+ A R+ EL+
Sbjct: 117 HQVGGASKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELM 175
>gi|348558005|ref|XP_003464809.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Cavia porcellus]
Length = 483
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 35 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 87 KSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 146
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ I ++GA +++ P + +V +
Sbjct: 147 I--KQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTV 199
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 200 SGEPEQNRKAVELIIQKIQEDP 221
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
++ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I +R P+ K E S L TT +++VP S G +IGKG
Sbjct: 109 L--NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKG 166
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + + A+ ++ +++
Sbjct: 167 GATVKAIMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVELIIQKIQ 218
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 370 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 429
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 430 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 468
>gi|291234615|ref|XP_002737239.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1-like
[Saccoglossus kowalevskii]
Length = 655
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 91/415 (21%), Positives = 174/415 (41%), Gaps = 55/415 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDET 99
D R L P +G+IIG+ G ++ + TK+K+ I + + E+ + +Y
Sbjct: 227 DLPVRLLVPSSMVGAIIGKKGANIRLITQQTKAKVDILRSKENASALEKAINIYG----- 281
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+P Q + ++++ ++ +E ++ ++ KLL + +G +IGKGG
Sbjct: 282 ----------TPLQCS--NTVEQIMETMVKENESANPSIEIPLKLLAHNSLVGRLIGKGG 329
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN---- 215
+ I E+ ++ I + L + + I G + KA ++ +L D+
Sbjct: 330 TTLNKIMEESNTKVSISNLQEL--TIYNMERTITIKGSLNDECKAEEMVSEKLRDSFRAD 387
Query: 216 ---PSRSQHLL-----ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDW 267
++ +L AS S +S G++ V A + GP Y +T
Sbjct: 388 MASLTQQYNLFPGLNHASVFSGLGNSPGAIFNVAMHNSAVLYA-IFGP-AAYTVNT---- 441
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
L P + L P++ +G +IG G I +I Q+S A ++V+ +E D
Sbjct: 442 -HHLLQPPSE-------ITYLFIPISAVGAIIGVKGQEIREISQKSSAKVRVEPPRSEDD 493
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGK 387
+ + E A A + + + G + + ++VP + +G +IGK
Sbjct: 494 E-----ERAVYIEGYPDAQWIAQWFIYHKILTDVCSGKGEVRLISEIMVPANMVGRIIGK 548
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
GS I ++ LT A I + PK P +++ +V+I G ++ A Q+ L
Sbjct: 549 RGSAIQDLELLTGAEIDV-PKNIKPN--DKNEVVVRIKGHFFASQSAQRQIRFML 600
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 103/209 (49%), Gaps = 23/209 (11%)
Query: 13 HSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDT 72
+S YA GP YT + + P + Y ++ PI +G+IIG G+ ++++ +
Sbjct: 424 NSAVLYAIFGPAA--YTVNTH-HLLQPPSEITYLFI-PISAVGAIIGVKGQEIREISQKS 479
Query: 73 KSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDE 132
+K+R+ P SE+ +E + +G + A + ++ +++ + G
Sbjct: 480 SAKVRVEP--PRSED--------DEERAVYIEG--YPDAQWIAQWFIYHKILTDVCSG-- 525
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
G ++ ++++VP++ +G +IGK G +Q++ TGA+I + K+ P+ +++ +V
Sbjct: 526 --KGEVRLISEIMVPANMVGRIIGKRGSAIQDLELLTGAEIDVPKNIK-PND--KNEVVV 580
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQH 221
+I G + A QI L+ + Q+
Sbjct: 581 RIKGHFFASQSAQRQIRFMLYTAKAMMQY 609
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 19/177 (10%)
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG---D 327
LY P DL +RL+ P + +G +IGK GA I I Q++ A + + S +
Sbjct: 220 LYLYPSIDLP-----VRLLVPSSMVGAIIGKKGANIRLITQQTKAKVDILRSKENASALE 274
Query: 328 DCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGK 387
+ + +T+ +E +V+ + IE +LL S +G LIGK
Sbjct: 275 KAINIYGTPLQCSNTVEQIMETMVKENESANPSIE-------IPLKLLAHNSLVGRLIGK 327
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDLDLAKDALIQVMTRLR 443
GG+ + ++ + + I NL ++ + E + I G L+ A V +LR
Sbjct: 328 GGTTLNKIMEESNTKVSI---SNLQELTIYNMERTITIKGSLNDECKAEEMVSEKLR 381
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 23/171 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
++ + HD ++G GG +T +L+VP+ Q G +IGKGG ++ IR
Sbjct: 82 KFEEWCSQFHD------IQGS----GGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 131
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA I++ D LP+ R+ V ISG + + + + I + ++P +
Sbjct: 132 VTGASIQVASD-MLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 178
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSE--KIERDSGLI--SFTTRLLVPTSRIGCLIGKGGSII 392
F+ A + + CS+ I+ G+ T RL+VP S+ G LIGKGGS I
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R +T A+I++ + LP + + V ISG +A+ Q + + + +
Sbjct: 127 KEIREVTGASIQVA-SDMLP---NSTERAVTISG----TSEAITQCIYHICCVMLESPPK 178
Query: 453 VSTFVPVLPYIPVSENG 469
+T +PY P + G
Sbjct: 179 GAT----IPYRPKPQVG 191
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 67/220 (30%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIV 63
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I + + S H GS
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEE-----------WCSQFHDIQGS---------------- 96
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
GG PR + +LRL+ P + G +IGKGG+ I +IR+
Sbjct: 97 ----GG---------------VPRPPI-----TLRLIVPASQCGSLIGKGGSKIKEIREV 132
Query: 313 SGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+GA+I+V S D L + + T+S T EA+ +
Sbjct: 133 TGASIQVAS------DMLPNSTERAV---TISGTSEAITQ 163
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 330
Query: 431 AKDA--LIQVMTRL-RANL 446
A LI + L +ANL
Sbjct: 331 VALAQYLISMSVELQKANL 349
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 330
Query: 201 VKKA 204
V A
Sbjct: 331 VALA 334
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ + +P S ER VT+ S+
Sbjct: 105 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSE 159
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 23/171 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
++ + HD ++G GG +T +L+VP+ Q G +IGKGG ++ IR
Sbjct: 82 KFEEWCSQFHD------IQGS----GGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 131
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA I++ D LP+ R+ V ISG + + + + I + ++P +
Sbjct: 132 VTGASIQVASD-MLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 178
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSE--KIERDSGLI--SFTTRLLVPTSRIGCLIGKGGSII 392
F+ A + + CS+ I+ G+ T RL+VP S+ G LIGKGGS I
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R +T A+I++ + LP + + V ISG +A+ Q + + + +
Sbjct: 127 KEIREVTGASIQVA-SDMLP---NSTERAVTISG----TSEAITQCIYHICCVMLESPPK 178
Query: 453 VSTFVPVLPYIPVSENG 469
+T +PY P + G
Sbjct: 179 GAT----IPYRPKPQVG 191
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 67/220 (30%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIV 63
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I + + S H GS
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEE-----------WCSQFHDIQGS---------------- 96
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
GG PR + +LRL+ P + G +IGKGG+ I +IR+
Sbjct: 97 ----GG---------------VPRPPI-----TLRLIVPASQCGSLIGKGGSKIKEIREV 132
Query: 313 SGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+GA+I+V S D L + + T+S T EA+ +
Sbjct: 133 TGASIQVAS------DMLPNSTERAV---TISGTSEAITQ 163
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 2/74 (2%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+ G+ T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D
Sbjct: 263 NRQQPAGNNQTHEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDR 320
Query: 191 LVQISGEASVVKKA 204
+ I+G V A
Sbjct: 321 TITITGNPDAVALA 334
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 330
Query: 431 AKDA--LIQVMTRL-RANL 446
A LI + L +ANL
Sbjct: 331 VALAQYLISMSVELQKANL 349
Score = 38.5 bits (88), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ + +P S ER VT+ S+
Sbjct: 105 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSE 159
>gi|314122361|ref|NP_001186642.1| RNA-binding protein Nova-1 isoform 2 [Gallus gallus]
gi|114652477|ref|XP_001170656.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Pan troglodytes]
gi|224051380|ref|XP_002200538.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Taeniopygia
guttata]
gi|291403673|ref|XP_002718161.1| PREDICTED: neuro-oncological ventral antigen 1 isoform 2
[Oryctolagus cuniculus]
gi|296214718|ref|XP_002753742.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Callithrix
jacchus]
gi|297694851|ref|XP_002824681.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Pongo abelii]
gi|332223199|ref|XP_003260755.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Nomascus
leucogenys]
gi|344273489|ref|XP_003408554.1| PREDICTED: RNA-binding protein Nova-1-like isoform 1 [Loxodonta
africana]
gi|345804243|ref|XP_860979.2| PREDICTED: RNA-binding protein Nova-1 isoform 6 [Canis lupus
familiaris]
gi|395838272|ref|XP_003792041.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Otolemur
garnettii]
gi|410962022|ref|XP_003987576.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Felis catus]
gi|426376606|ref|XP_004055088.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Gorilla
gorilla gorilla]
gi|122064615|sp|Q2PFW9.1|NOVA1_MACFA RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1; AltName:
Full=Ventral neuron-specific protein 1
gi|84579135|dbj|BAE73001.1| hypothetical protein [Macaca fascicularis]
gi|90079349|dbj|BAE89354.1| unnamed protein product [Macaca fascicularis]
gi|380813128|gb|AFE78438.1| RNA-binding protein Nova-1 isoform 2 [Macaca mulatta]
Length = 483
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 35 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 87 KSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 146
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ I ++GA +++ P + +V +
Sbjct: 147 I--KQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTV 199
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 200 SGEPEQNRKAVELIIQKIQEDP 221
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
++ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I +R P+ K E S L TT +++VP S G +IGKG
Sbjct: 109 L--NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKG 166
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + + A+ ++ +++
Sbjct: 167 GATVKAIMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVELIIQKIQ 218
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 370 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 429
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 430 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 468
>gi|328783034|ref|XP_624673.3| PREDICTED: far upstream element-binding protein 1-like [Apis
mellifera]
Length = 735
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 133/306 (43%), Gaps = 46/306 (15%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
+ P K+G IIG+GGE +KQL+ + +K+ + + P E+ + + +
Sbjct: 203 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 262
Query: 108 FVSPAQDALFKVHDRVIAEELRGDEDSDG------GHQVTAKLLVPSDQIGCVIGKGGQI 161
+ A+ + H + G+ +D G ++LVP +G VIGKGG +
Sbjct: 263 YELIAEKEMQMFHRGSRGSDRSGNYSNDSNFNHGSGTTDGVEVLVPRAAVGVVIGKGGDM 322
Query: 162 VQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ I++ETGA+++ + E P D +SG+ V+ Q+ R+ Q
Sbjct: 323 IKKIQAETGARVQFQQGREDGP-----GDRKCIVSGKHQAVE----QVRQRI-------Q 366
Query: 221 HLLASAI--SNSHSSSGSLVGPTAATPIVGIAPLMGP--YGGYKGDTAGDWSRSLYSAPR 276
L+ S + + S+ G+ GP G + P YGG W R P
Sbjct: 367 ELIDSVMRRDDGRSNMGTRSGPRGN----GFSNNRNPNEYGG--------WDRR-QGGPM 413
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD--SSSTEGDDCLITVS 334
D F++ P + G +IGKGG I QI Q++GA ++D + S E + I
Sbjct: 414 QDKIETTFTV----PSSKCGIIIGKGGETIKQINQQTGAHCELDRRNQSNENEKIFIIRG 469
Query: 335 SKEFFE 340
+ E E
Sbjct: 470 NPEQVE 475
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 93/431 (21%), Positives = 181/431 (41%), Gaps = 112/431 (25%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF 108
P +G IIGRGGE + +L+ +T KI++ + G ERV T+ + + N ++
Sbjct: 114 VPDNMVGLIIGRGGEQITRLQSETGCKIQMA-SESGLPERVCTLTGSREAVNRAKE---- 168
Query: 109 VSPAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
L V+ R E + S GG H ++++P ++G +IGKGG+ ++ +
Sbjct: 169 -----LVLSIVNQRSRTEGIGDMSGSSGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQL 223
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ ++GA++ ++++ + ++ ++I+G+ V+ A + + + + H
Sbjct: 224 QEKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYAKQLVYELIAEKEMQMFH---- 275
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFS 285
S GS D +G++S + + S
Sbjct: 276 -----RGSRGS-------------------------DRSGNYSN---DSNFNHGSGTTDG 302
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSKEFFEDT 342
+ ++ P A +G VIGKGG +I +I+ E+GA ++ +G C++
Sbjct: 303 VEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCIV----------- 351
Query: 343 LSATIEAVVRLQPRCSEKIE----RDSGLISFTTR------------------------- 373
S +AV +++ R E I+ RD G + TR
Sbjct: 352 -SGKHQAVEQVRQRIQELIDSVMRRDDGRSNMGTRSGPRGNGFSNNRNPNEYGGWDRRQG 410
Query: 374 ----------LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
VP+S+ G +IGKGG I ++ + T A+ L + N ++E++++
Sbjct: 411 GPMQDKIETTFTVPSSKCGIIIGKGGETIKQINQQTGAHCE-LDRRNQ---SNENEKIFI 466
Query: 424 ISGDLDLAKDA 434
I G+ + + A
Sbjct: 467 IRGNPEQVEHA 477
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/170 (19%), Positives = 78/170 (45%), Gaps = 13/170 (7%)
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATI 347
+ P +G +IG+GG I +++ E+G I++ S S + S+E + +
Sbjct: 112 IRVPDNMVGLIIGRGGEQITRLQSETGCKIQMASESGLPERVCTLTGSREAV-NRAKELV 170
Query: 348 EAVVRLQPRCSEKIERDSGLISFT-----TRLLVPTSRIGCLIGKGGSIITEMRRLTKAN 402
++V + R + +++P ++G +IGKGG I +++ + A
Sbjct: 171 LSIVNQRSRTEGIGDMSGSSGGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAK 230
Query: 403 IRILPKENLPKIASEDDEMVQISGD---LDLAKDALIQVMTRLRANLFDR 449
+ ++ + + E ++ ++I+GD ++ AK + +++ +F R
Sbjct: 231 MVVIQE----GPSQEQEKPLRITGDPQKVEYAKQLVYELIAEKEMQMFHR 276
>gi|297735477|emb|CBI17917.3| unnamed protein product [Vitis vinifera]
Length = 364
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 150/343 (43%), Gaps = 53/343 (15%)
Query: 71 DTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA-EELR 129
+T+++IR+ + G+ +R+V + + E+ + +SPA DA+ +V RV E
Sbjct: 4 ETRARIRVLDGAVGTSDRIVLI-------SGREEPEAPLSPAMDAVIRVFKRVTGLSESE 56
Query: 130 GDEDSDGGHQV---TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
GD + G V + +LLV S Q +IGK G ++++I+ TGA +R+L + +P A
Sbjct: 57 GDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAA 116
Query: 187 RSDELVQISGEASVVKKALCQIASRLHD---------------NPSRSQHLLASAISNS- 230
+ +V++ GEA V+KAL + L N + SQ + ++
Sbjct: 117 ADERIVELQGEALKVQKALEAVVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADKS 176
Query: 231 --HSSSGSLVGPTAATPI---------------VGIAPLMGPYGGYKGDTAGDWSRSLYS 273
H +S + +G + P G+ P+ G G G + R+
Sbjct: 177 LLHGTSQTGMGSDYSLPAKRESLYLDRETQMEHSGL-PMYGQEHGLSGIRSSGLGRA--G 233
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
AP + + + P++ +IG GGA I IR+ SGA + V S D+ + +
Sbjct: 234 AP----IVTQIAQTMQIPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEI 289
Query: 334 SSKEFFEDTLSATIEAVV--RLQPRCSEKIERDSGLISFTTRL 374
T I+ + +P S + DSGL S ++L
Sbjct: 290 KGTSSQVQTAQQLIQEFISNHKEPVPSSYGKMDSGLRSSYSQL 332
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 79/146 (54%), Gaps = 8/146 (5%)
Query: 311 QESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD------ 364
+E+ A I+V + D ++ +S +E E LS ++AV+R+ R + E +
Sbjct: 3 EETRARIRVLDGAVGTSDRIVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGKAY 62
Query: 365 --SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+G+ + RLLV +++ LIGK GS+I ++ T A++R+L + +P A+ D+ +V
Sbjct: 63 GAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIV 122
Query: 423 QISGDLDLAKDALIQVMTRLRANLFD 448
++ G+ + AL V+ LR L D
Sbjct: 123 ELQGEALKVQKALEAVVGHLRKFLVD 148
>gi|386764191|ref|NP_001245616.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
gi|383293324|gb|AFH07330.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
Length = 638
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 99/426 (23%), Positives = 191/426 (44%), Gaps = 70/426 (16%)
Query: 24 NKRRYTGDDRDQF--IIGP---EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
N+RR + R+ + + GP D R L +G+IIGR G ++ + +++++ +
Sbjct: 119 NQRRSQRNQRNPYPGMPGPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDV 178
Query: 79 --GETVPGSEERVVTVYSASDE-TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E V GS E+ +T+Y + TNA + + +V + +G E S
Sbjct: 179 HRKENV-GSLEKSITIYGNPENCTNACKR-----------ILEVMQQEAISTNKG-ELSP 225
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
++ K+L ++ IG +IGK G ++ I +T +I + + S L + ++ +
Sbjct: 226 ECSEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNL--ERIITVK 283
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-- 253
G L +N SR+++ +++ + S+ + + P + G+ P+
Sbjct: 284 G---------------LIENMSRAENQISTKLRQSYENDLQAMAPQSLM-FPGLHPMAMM 327
Query: 254 -GPYGGYKGDTAGDW----SRSLYSAPR--------DDLSSKEFSLRLVCPVANIGGVIG 300
P G +T+ + S ++ P +DL + L P +G +IG
Sbjct: 328 STPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTY---LYIPNNAVGAIIG 384
Query: 301 KGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK 360
G+ I I + S A++K+ + + D L + ++ T+ T E + Q EK
Sbjct: 385 TRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKV---TIVGTPEGQWKAQYMIFEK 439
Query: 361 IERDSGL------ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKI 414
+ R+ G + T LLV +S++G +IGKGG + E++R+T + I+ LP+ L
Sbjct: 440 M-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIK-LPEHALAPP 497
Query: 415 ASEDDE 420
+ D+E
Sbjct: 498 SGGDEE 503
Score = 39.3 bits (90), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T Y Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 367 QETTYLYI-PNNAVGAIIGTRGSHIRSIMRFSNASLKIAPLDADKPLDQQTERKVTIVGT 425
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELR-GDEDSDGGHQVTAKLLVPSDQIGCV 154
+ A + + +++ E G +D ++T +LLV S Q+G +
Sbjct: 426 PEG-------------QWKAQYMIFEKMREEGFMCGTDDV----RLTVELLVASSQVGRI 468
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLH 213
IGKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 469 IGKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 528
Query: 214 DNP 216
NP
Sbjct: 529 TNP 531
>gi|160333253|ref|NP_001103813.1| P-element somatic inhibitor [Bombyx mori]
gi|159031799|dbj|BAF91871.1| Bombyx homolog of P-element somatic inhibitor [Bombyx mori]
Length = 703
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/395 (20%), Positives = 164/395 (41%), Gaps = 81/395 (20%)
Query: 40 PEDTVYRYL-CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
P+ ++ Y+ P R +G IIGRGGE + +L+ ++ KI++ G+ +R+ T+ + D
Sbjct: 98 PDQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLTGSRD- 156
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELR-----GDEDSDGGHQVTAKLLVPSDQIGC 153
A + + V + + R A + + G S G ++++P ++G
Sbjct: 157 --AIQRAKELV----NQIVNHRGRENAPQHQDPSEPGMNMSRPGPNAMEEIMIPGAKVGL 210
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+IGK G+ ++ ++ +TGA++ +++D + ++ ++ISG+ + V+ A
Sbjct: 211 IIGKNGKTIKQLQEQTGAKMVVIQDGPNENSFKPQEKPLRISGDPAKVEHA--------- 261
Query: 214 DNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY-GGYKGDTAGDWSRSLY 272
+ L+ ++N PY GY G
Sbjct: 262 ------KQLVFELLANKDMQEPPR-----------------PYDDGYGG----------- 287
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-STEGDDCLI 331
S P + L++ S ++ P IG VIG G +I +I+ ++G ++ + E D L
Sbjct: 288 SDPGNGLATT--SAEVLVPKVAIGVVIGHKGKMIKKIQADTGCRVQFNQEHDEEPGDKLC 345
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSE-----------KIERDSGLISFTTR------- 373
+ K D IE ++ RC E + D G + + +
Sbjct: 346 YLQGKPHQLDQARQMIEDLISSVKRCEEDSRSRAVRGQGQQNGDRGGMEYGQQWPDRPEM 405
Query: 374 ---LLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ + G +IG+GG II ++ + A+ +
Sbjct: 406 RVTFTIHGPKCGLVIGRGGEIIKQINAQSGAHCEL 440
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
S P + L + + + P +G +IG+GG I +++ ESG I++ + D L T
Sbjct: 91 SGPTNLLPDQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCT 150
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGC 383
++ + +V + R + +D +++P +++G
Sbjct: 151 LTGSRDAIQRAKELVNQIVNHRGRENAPQHQDPSEPGMNMSRPGPNAMEEIMIPGAKVGL 210
Query: 384 LIGKGGSIITEMRRLTKANIRIL---PKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
+IGK G I +++ T A + ++ P EN K ++ ++ISGD + A Q++
Sbjct: 211 IIGKNGKTIKQLQEQTGAKMVVIQDGPNENSFK---PQEKPLRISGDPAKVEHAK-QLVF 266
Query: 441 RLRAN 445
L AN
Sbjct: 267 ELLAN 271
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 92/171 (53%), Gaps = 23/171 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIVK+ R ++ +KI I + GS ER+VTV ++ + F+
Sbjct: 27 KEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGPTN--SIFKAFTLICK 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGG---HQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
++ + HD ++G GG +T +L+VP+ Q G +IGKGG ++ IR
Sbjct: 82 KFEEWCSQFHD------IQGS----GGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 131
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA I++ D LP+ R+ V ISG + + + + I + ++P +
Sbjct: 132 VTGASIQVASD-MLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 178
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 70
Query: 337 EFFEDTLSATIEAVVRLQPRCSE--KIERDSGLI--SFTTRLLVPTSRIGCLIGKGGSII 392
F+ A + + CS+ I+ G+ T RL+VP S+ G LIGKGGS I
Sbjct: 71 SIFK----AFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R +T A+I++ + LP + + V ISG +A+ Q + + + +
Sbjct: 127 KEIREVTGASIQVA-SDMLP---NSTERAVTISG----TSEAITQCIYHICCVMLESPPK 178
Query: 453 VSTFVPVLPYIPVSENG 469
+T +PY P + G
Sbjct: 179 GAT----IPYRPKPQVG 191
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 92/220 (41%), Gaps = 67/220 (30%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIV 63
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I + + S H GS
Sbjct: 64 TVTGPTNSIFKAFTLICKKFEE-----------WCSQFHDIQGS---------------- 96
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
GG PR + +LRL+ P + G +IGKGG+ I +IR+
Sbjct: 97 ----GG---------------VPRPPI-----TLRLIVPASQCGSLIGKGGSKIKEIREV 132
Query: 313 SGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVR 352
+GA+I+V S D L + + T+S T EA+ +
Sbjct: 133 TGASIQVAS------DMLPNSTERAV---TISGTSEAITQ 163
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGATDRTITITGNPDA 330
Query: 431 AKDA--LIQVMTRL-RANL 446
A LI + L +ANL
Sbjct: 331 VSLAQYLISMSVELQKANL 349
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ VP++ IGC+IGKGG + IR +GA IRI E A +D + I+G
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 330
Query: 201 VKKA 204
V A
Sbjct: 331 VSLA 334
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ + +P S ER VT+ S+
Sbjct: 105 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASDMLPNSTERAVTISGTSE 159
>gi|326921878|ref|XP_003207181.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-like, partial [Meleagris gallopavo]
Length = 503
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 177/400 (44%), Gaps = 63/400 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +
Sbjct: 117 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS 176
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 177 ------------------TACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEG 218
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 219 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRESYE 274
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
N + +L A I + ++ L P+++ + G S +++
Sbjct: 275 NDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVASAAAAASYPPFGPESETVH-- 332
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 333 -------------LFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV 377
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGG 389
++ EA + Q R K++ ++ + + VP+ G +IGKGG
Sbjct: 378 -------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGG 430
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+ E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 431 KTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 466
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 33/179 (18%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSAS 96
GPE P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 324 FGPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPP 383
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIGC 153
+ A FK R+ + +E+ G + + A + VPS G
Sbjct: 384 E-----------------AQFKAQGRIYGK--LKEENFFGPKEEVKLEAHIKVPSYAAGR 424
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
VIGKGG+ V +++ T A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 425 VIGKGGKTVNELQNLTSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQLAQR 474
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/198 (20%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G S + P+ D+ LR++ P +G +IGK GA I I +++ + I +
Sbjct: 104 GSPSATARQKPQSDVP-----LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN 158
Query: 325 EG-DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
G + IT+ S T I +++ + + ++ E ++L + +G
Sbjct: 159 AGAAEKPITIHSTPEGCSTACKIIMEIMQKEAQDTKFTE------EIPLKILAHNNFVGR 212
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
LIGK G + ++ + T I I P ++L + + + G ++ A ++M ++R
Sbjct: 213 LIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIETCAKAEEEIMKKIR 270
Query: 444 ANLFDREGAVSTFVPVLP 461
+ + A++ ++P
Sbjct: 271 ESYENDIAAMNLQAHLIP 288
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 91/173 (52%), Gaps = 17/173 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 69 --FKAFAMIA-YKFEEDIINS--MSNSTATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 123
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
R TG+Q+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 124 RESTGSQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 172
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 6 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 58
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ + +++SNS ++S V
Sbjct: 59 VTITGPTDAIFKAFAMIAYKFEED-------IINSMSNSTATSKPPV------------- 98
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 99 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 125
Query: 312 ESGAAIKV 319
+G+ ++V
Sbjct: 126 STGSQVQV 133
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 88/192 (45%), Gaps = 36/192 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT----------- 332
++RL+ +G +IGK G + ++R+ESGA I + + IT
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGNCPERIVTITGPTDAIFKAFA 73
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+ + +F ED +++ + +P T RL+VP S+ G LIGKGGS I
Sbjct: 74 MIAYKFEEDIINSMSNSTATSKP-------------PVTLRLVVPASQCGSLIGKGGSKI 120
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R T + +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 121 KEIRESTGSQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPK 172
Query: 453 VSTFVPVLPYIP 464
+T +PY P
Sbjct: 173 GAT----IPYRP 180
>gi|363543195|ref|NP_001241811.1| RNA-binding protein Nova-1 [Zea mays]
gi|195659123|gb|ACG49029.1| RNA-binding protein Nova-1 [Zea mays]
Length = 344
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 147/347 (42%), Gaps = 49/347 (14%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE 86
GDD+++ I R+L G IIG+GG + + + ++I++ E PG+
Sbjct: 33 GDDKEKPI------HLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTN 86
Query: 87 ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+R++ V E A+ + ++++AE G+E ++ + +L+V
Sbjct: 87 DRIIMVSGLFGEV-------------MKAMELILEKLLAE---GEEFNEAEARPKVRLVV 130
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
P++ G +IGKGG +++ E+ A I+I ++ + D LV ++G A+
Sbjct: 131 PNNSCGGIIGKGGATIKSFIEESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAID 188
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM--------GPYGG 258
I +L S H A+ +S+ +G P+ + P + GP G
Sbjct: 189 LILKKL----SEDVHYPAN-LSSPFPYAGLTFPSYPGVPVGYMIPQVPYNNAVNYGPNNG 243
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAA 316
Y G + + S P +S E L +A+ IG V+G+ G I +I Q SGA
Sbjct: 244 Y----GGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGAR 299
Query: 317 IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
IK+ S GD T K T A A + R S ER
Sbjct: 300 IKI---SDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSER 343
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE---GDDCLITVS 334
D K LR + A+ G +IGKGG+ IN + +SGA I++ S +D +I VS
Sbjct: 34 DDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 93
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
F + + A +E + L+ +E E + RL+VP + G +IGKGG+ I
Sbjct: 94 G--LFGEVMKA-MELI--LEKLLAEGEEFNEAEARPKVRLVVPNNSCGGIIGKGGATIKS 148
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVS 454
+ A I+I P++N D +V ++G D +A+ ++ +L ++ S
Sbjct: 149 FIEESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSS 206
Query: 455 TF------VPVLPYIPV 465
F P P +PV
Sbjct: 207 PFPYAGLTFPSYPGVPV 223
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSD 189
+E D + + LV + GC+IGKGG + + +S++GA+I++ + E P +D
Sbjct: 31 EEGDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGT---ND 87
Query: 190 ELVQISGEASVVKKALCQIASRL 212
++ +SG V KA+ I +L
Sbjct: 88 RIIMVSGLFGEVMKAMELILEKL 110
>gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 91/175 (52%), Gaps = 31/175 (17%)
Query: 51 IRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVS 110
++++GSIIG+ GE VK++R ++ ++I I E S ER+VT+ A++
Sbjct: 5 LQEVGSIIGKKGETVKKIREESGARINISEG--SSPERIVTITGATE------------- 49
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQ 163
A+F+ +IA++ D ++ + VT +L+ P Q G +IGKGG ++
Sbjct: 50 ----AIFRTFA-MIAQKFEEDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIK 104
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
IR TGAQ+++ D LP R+ V ISG + + + I S + ++P +
Sbjct: 105 EIRETTGAQVQVAGD-MLPDSTERA---VTISGTPQAITQCVRHICSVMLESPPK 155
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 63/121 (52%), Gaps = 22/121 (18%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G +IGK G + +IR+ESGA I + +EG SS E T++ EA+ R
Sbjct: 8 VGSIIGKKGETVKKIREESGARINI----SEG-------SSPERI-VTITGATEAIFRTF 55
Query: 355 PRCSEKIERD-------SGLIS---FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIR 404
++K E D S + S T RL+ P S+ G LIGKGGS I E+R T A ++
Sbjct: 56 AMIAQKFEEDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQ 115
Query: 405 I 405
+
Sbjct: 116 V 116
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 143/340 (42%), Gaps = 72/340 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKHICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 260 KGD----------------TAGD--WSRSLYSAPRD-------DLSSKEFSLRLVCPVAN 294
+ D T G+ +S S+P D S++ S L P
Sbjct: 236 QPDLTKLHQLAVQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDASAQTTSHELTIPNDL 295
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG GA IN+I Q SGA IK+ ++ D +T++
Sbjct: 296 IGCIIGCQGAKINEICQMSGALIKIANTVEGSTDRQVTIT 335
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
DGG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 DGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S LV
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNSTAASRPLV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 86/174 (49%), Gaps = 30/174 (17%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GEIVK+ R ++ +KI I + ER+VTV ++
Sbjct: 24 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTN-------------- 67
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGG-------HQVTAKLLVPSDQIGCVIGKGGQIVQN 164
A+FK + + E GG +T +L+VP+ Q G +IGKGG ++
Sbjct: 68 ---AIFKAFSLICKKFEEFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGSKIKE 124
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
IR TGA I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 125 IREVTGASIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 174
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 27/188 (14%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G I+ + R+ESGA I + S + ++TV+
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSC--PERIVTVTGPT------ 66
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISF-------TTRLLVPTSRIGCLIGKGGSIITEMR 396
+A +A + + E E SG S T RL+VP S+ G LIGKGGS I E+R
Sbjct: 67 NAIFKAFSLICKKFEEFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGSKIKEIR 126
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
+T A+I++ E LP + + V ISG +A+ Q + + + + +T
Sbjct: 127 EVTGASIQVA-SEMLP---NSTERAVTISG----TSEAITQCIYHICCVMLESPPKGAT- 177
Query: 457 VPVLPYIP 464
+PY P
Sbjct: 178 ---IPYRP 182
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 78/189 (41%), Gaps = 59/189 (31%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V
Sbjct: 8 NDDPNITLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIV 60
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I + +
Sbjct: 61 TVTGPTNAIFKAFSLICKKFEE-------------------------------------- 82
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
++ +G S + P +LRL+ P + G +IGKGG+ I +IR+
Sbjct: 83 ------FQELQSGGGSMGIPKPP--------ITLRLIVPASQCGSLIGKGGSKIKEIREV 128
Query: 313 SGAAIKVDS 321
+GA+I+V S
Sbjct: 129 TGASIQVAS 137
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 103 RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 155
>gi|167535308|ref|XP_001749328.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772194|gb|EDQ85849.1| predicted protein [Monosiga brevicollis MX1]
Length = 689
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 160/382 (41%), Gaps = 83/382 (21%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET------------VPGSEERVVTVYSAS 96
P +G IIGRGGE + +L+ + S+I++ + VP S +R +
Sbjct: 102 VPGAHVGRIIGRGGETINRLQNQSGSRIQVAQDLGQPMRPCTLTGVPDSVQRAKVLIEEI 161
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG----HQVTAKLLVPSDQIG 152
+ G P +A ++A D DG + T ++VP+++ G
Sbjct: 162 VREHMQPFGPGAGGPGGNASGPTTASLMASAYGTAPDGDGADPNANAETETMMVPAERAG 221
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+IG+GG+ + I++ +GA++++++++ P A R L+ + G+A +K+A +A L
Sbjct: 222 FLIGRGGETINMIQTRSGARLKMVQED--PHAAER---LLYMMGDAEAIKRARELVADLL 276
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
+ PS Q A + S+
Sbjct: 277 AEKPSAPQE--APPMPTSY----------------------------------------- 293
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG---DDC 329
D +++ L++ P G VIG+GG I +I ++G I+ D + G +D
Sbjct: 294 -----DENNRHLRLKIEVPGVAAGRVIGRGGETIRRIEADTGCRIQFDQADGVGLGPNDA 348
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF------TTRLLVPTSRIGC 383
I + +D + A +A+V + R +E+ D+G S T + +P R G
Sbjct: 349 RIATLTGN--QDAIEAAEQAIVGII-RDAER--PDAGPPSRRADSRPTDTIAIPAERAGF 403
Query: 384 LIGKGGSIITEMRRLTKANIRI 405
+IGKGG I ++ T ++ +
Sbjct: 404 IIGKGGETIRSIQDQTGVHLEL 425
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/297 (22%), Positives = 118/297 (39%), Gaps = 47/297 (15%)
Query: 119 VHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
+H V E L +D D VT ++ VP +G +IG+GG+ + +++++G++I++ +D
Sbjct: 76 IHHVVWNEPLE-LKDVDASSIVTVEMTVPGAHVGRIIGRGGETINRLQNQSGSRIQVAQD 134
Query: 179 EHLP--SCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
P C L +G V++A I + +H+ +
Sbjct: 135 LGQPMRPCTL--------TGVPDSVQRAKVLIEEIVR------EHMQPFGPGAGGPGGNA 180
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
TA+ LM G D GD + D ++ + ++ P G
Sbjct: 181 SGPTTAS--------LMASAYGTAPD--GDGA---------DPNANAETETMMVPAERAG 221
Query: 297 GVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV--------SSKEFFEDTLSATIE 348
+IG+GG IN I+ SGA +K+ + L+ + ++E D L+
Sbjct: 222 FLIGRGGETINMIQTRSGARLKMVQEDPHAAERLLYMMGDAEAIKRARELVADLLAEKPS 281
Query: 349 AVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
A P + E + L ++ VP G +IG+GG I + T I+
Sbjct: 282 APQEAPPMPTSYDENNRHL---RLKIEVPGVAAGRVIGRGGETIRRIEADTGCRIQF 335
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
+ P + G +IGRGGE + ++ + +++++ + P + ER++ + + A + +
Sbjct: 214 MVPAERAGFLIGRGGETINMIQTRSGARLKMVQEDPHAAERLLYMMG---DAEAIKRARE 270
Query: 108 FVSPAQDALF-KVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
V+ D L K A + D + H + K+ VP G VIG+GG+ ++ I
Sbjct: 271 LVA---DLLAEKPSAPQEAPPMPTSYDENNRH-LRLKIEVPGVAAGRVIGRGGETIRRIE 326
Query: 167 SETGAQIRI 175
++TG +I+
Sbjct: 327 ADTGCRIQF 335
>gi|363746094|ref|XP_003643523.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Gallus gallus]
Length = 239
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 28/194 (14%)
Query: 27 RYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE 86
R +G Q I R L ++IGSIIG+ GE VK++R + ++I I E
Sbjct: 6 RASGPREPQLSI---TLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG--SCP 60
Query: 87 ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKL 144
ER+ T+ ++D A+F+ + EE GD + G VT +L
Sbjct: 61 ERITTITGSTD-----------------AVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRL 103
Query: 145 LVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
++P+ Q G +IGK G ++ IR +GAQ+++ D LP+ R+ V +SG + +
Sbjct: 104 VIPASQCGSLIGKAGTKIREIRESSGAQVQVAGD-LLPNSTERA---VTVSGVPDTIIQC 159
Query: 205 LCQIASRLHDNPSR 218
+ QI + + ++P +
Sbjct: 160 VRQICAVILESPPK 173
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 30/198 (15%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
S PR+ S +LR++ IG +IGK G + +IR++S A I + S C
Sbjct: 8 SGPREPQLSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS-----CPER 62
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIG 386
++ T++ + +AV R + K+E D +G T RL++P S+ G LIG
Sbjct: 63 IT-------TITGSTDAVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRLVIPASQCGSLIG 115
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
K G+ I E+R + A +++ + LP + + V +SG D +IQ + ++ A +
Sbjct: 116 KAGTKIREIRESSGAQVQVA-GDLLP---NSTERAVTVSG----VPDTIIQCVRQICAVI 167
Query: 447 FDREGAVSTFVPVLPYIP 464
+ +T +PY P
Sbjct: 168 LESPPKGAT----IPYHP 181
>gi|383858339|ref|XP_003704659.1| PREDICTED: far upstream element-binding protein 1-like [Megachile
rotundata]
Length = 736
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 86/321 (26%), Positives = 135/321 (42%), Gaps = 76/321 (23%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEE-----------------RVV 90
+ P K+G IIG+GGE +KQL+ + +K+ + + P E+ ++V
Sbjct: 203 MIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQLV 262
Query: 91 TVYSASDETNAFEDG----DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
A E F G D+ S + D+ F G +DG ++LV
Sbjct: 263 YELIAEKEMQMFHRGARGNDRSGSYSNDSSFN----------HGSGTTDG-----VEVLV 307
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKAL 205
P +G VIGKGG +++ I++ETGA+++ + E P D +SG+ V+
Sbjct: 308 PRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGP-----GDRKCILSGKHQAVE--- 359
Query: 206 CQIASRLHDNPSRSQHLLASAI--SNSHSSSGSLVGPTAATPIVGIAPLMGP--YGGYKG 261
Q+ R+ Q L+ S + + S G+ GP G P YGG
Sbjct: 360 -QVRQRI-------QELIDSVMRRDDGRSPMGTRSGPRGN----GFGNNRNPNEYGG--- 404
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD- 320
W R P D F++ P + G +IGKGG I QI Q++GA ++D
Sbjct: 405 -----WDRR-QGGPMQDKIETTFTV----PSSKCGIIIGKGGETIKQINQQTGAHCELDR 454
Query: 321 -SSSTEGDDCLITVSSKEFFE 340
+ S E + I + E E
Sbjct: 455 RNQSNENEKIFIIRGNPEQVE 475
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 179/422 (42%), Gaps = 92/422 (21%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF 108
P + +G IIGRGGE + +L+ +T KI++ G ERV T+ + + N
Sbjct: 112 VPDKMVGLIIGRGGEQITRLQSETGCKIQMAPES-GLPERVCTLTGSREAVNR------- 163
Query: 109 VSPAQDALFKVHDRVIAEELRGDEDSDGG------HQVTAKLLVPSDQIGCVIGKGGQIV 162
A++ + + ++ E GD + G H ++++P ++G +IGKGG+ +
Sbjct: 164 ---AKELVLSIVNQRSRTEGIGDMNMSGSSGGMMGHPGFVEIMIPGPKVGLIIGKGGETI 220
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
+ ++ ++GA++ ++++ + ++ ++I+G+ V+ A + + + Q
Sbjct: 221 KQLQEKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYAKQLVYELIAE--KEMQMF 274
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSK 282
A N S G Y D++ + S
Sbjct: 275 HRGARGNDRS------------------------GSYSNDSS-----------FNHGSGT 299
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSK--E 337
+ ++ P A +G VIGKGG +I +I+ E+GA ++ +G C+++ + E
Sbjct: 300 TDGVEVLVPRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPGDRKCILSGKHQAVE 359
Query: 338 FFEDTLSATIEAVVR----LQPRCSEKIERDSGLIS---------------------FTT 372
+ I++V+R P + R +G + T
Sbjct: 360 QVRQRIQELIDSVMRRDDGRSPMGTRSGPRGNGFGNNRNPNEYGGWDRRQGGPMQDKIET 419
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
VP+S+ G +IGKGG I ++ + T A+ L + N ++E++++ I G+ + +
Sbjct: 420 TFTVPSSKCGIIIGKGGETIKQINQQTGAHCE-LDRRNQ---SNENEKIFIIRGNPEQVE 475
Query: 433 DA 434
A
Sbjct: 476 HA 477
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/176 (18%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATI 347
+ P +G +IG+GG I +++ E+G I++ S + S+E + +
Sbjct: 110 IRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGLPERVCTLTGSREAV-NRAKELV 168
Query: 348 EAVVRLQPRCS-----------EKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
++V + R + G + +++P ++G +IGKGG I +++
Sbjct: 169 LSIVNQRSRTEGIGDMNMSGSSGGMMGHPGFV----EIMIPGPKVGLIIGKGGETIKQLQ 224
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGD---LDLAKDALIQVMTRLRANLFDR 449
+ A + ++ + + E ++ ++I+GD ++ AK + +++ +F R
Sbjct: 225 EKSGAKMVVIQE----GPSQEQEKPLRITGDPQKVEYAKQLVYELIAEKEMQMFHR 276
>gi|332864859|ref|XP_001157309.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Pan troglodytes]
Length = 440
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 149/319 (46%), Gaps = 43/319 (13%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
++ K+L ++ +G +IGK G+ ++ I +T +I I + L + + + G
Sbjct: 137 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNV 194
Query: 199 SVVKKALCQIASRL---HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
KA +I ++ ++N S +L A I + ++ L PT+ P
Sbjct: 195 ETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMP---------- 244
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
T+G S P+ + S E ++ L P ++G +IGK G I Q+ + +GA
Sbjct: 245 -----PPTSGPPSAMTPPYPQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGA 298
Query: 316 AIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISF 370
+IK+ + E D + + ++ EA + Q R KI+ ++ + +
Sbjct: 299 SIKI--APAEAPDAKVRMV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKL 349
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL- 428
+ VP+ G +IGKGG + E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 350 EAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFY 405
Query: 429 --DLAKDALIQVMTRLRAN 445
+A+ + +++T+++ +
Sbjct: 406 ACQVAQRKIQEILTQVKQH 424
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 42/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 260 QFEQSETETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 318
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H R V
Sbjct: 319 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIR-----------------------V 355
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V +++ + A++ + +D+ +D+ +V+I+G
Sbjct: 356 PSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 406
Query: 206 CQIASR 211
CQ+A R
Sbjct: 407 CQVAQR 412
>gi|149051189|gb|EDM03362.1| neuro-oncological ventral antigen 1, isoform CRA_c [Rattus
norvegicus]
Length = 483
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 35 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 87 KSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 146
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ I ++GA +++ P + +V +
Sbjct: 147 I--KQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTV 199
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 200 SGEPEQNRKAVELIIQKIQEDP 221
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
++ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 108
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I +R P+ K E S L TT +++VP S G +IGKG
Sbjct: 109 L--NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKG 166
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + + A+ ++ +++
Sbjct: 167 GATVKAIMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVELIIQKIQ 218
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 370 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 429
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 430 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 468
>gi|221114013|ref|XP_002155770.1| PREDICTED: poly(rC)-binding protein 3-like [Hydra magnipapillata]
Length = 313
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 122/274 (44%), Gaps = 63/274 (22%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDETNAFEDGDKFVSPA 112
G IIG+ G ++Q+R ++ + I V GS ER++ + S E
Sbjct: 18 GGIIGKEGRNIRQMRDESGANI----NVSGSTGVERILNIKGTSSEV------------- 60
Query: 113 QDALFKVHDRVIAEELR---GDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSET 169
K R++AE+L+ +++ VT +LLVP+ Q G +IGKGGQ ++ IR +
Sbjct: 61 -----KSAVRMVAEKLQEILSGSNNEYVPPVTLRLLVPNSQCGPLIGKGGQRIKEIREAS 115
Query: 170 GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISN 229
GA I I E LP + RS V ++G + + +I + P+R ++ N
Sbjct: 116 GATITI-PSETLPGSSERS---VTLAGSPEALGLCIAKIWDIFEEFPARQNNV--QYFPN 169
Query: 230 SHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSK-EFSLRL 288
+ S +GP + + G G LS + E +RL
Sbjct: 170 MYPRS---MGPHQLSVMSGQLSFTG------------------------LSRRSEQKVRL 202
Query: 289 VCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
P IG +IGKGG IN+IRQ SGA + V+ S
Sbjct: 203 --PSNVIGSLIGKGGCHINEIRQFSGATVHVEES 234
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 73/140 (52%), Gaps = 19/140 (13%)
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
++ ++ L + + GG+IGK G I Q+R ESGA I V S+ G + ++ +
Sbjct: 1 MAEEKLELHFIILSQDAGGIIGKEGRNIRQMRDESGANINVSGST--GVERILNIKGT-- 56
Query: 339 FEDTLSATIEAVVRLQPRCSEKIER------DSGLISFTTRLLVPTSRIGCLIGKGGSII 392
S+ +++ VR+ +EK++ + + T RLLVP S+ G LIGKGG I
Sbjct: 57 -----SSEVKSAVRM---VAEKLQEILSGSNNEYVPPVTLRLLVPNSQCGPLIGKGGQRI 108
Query: 393 TEMRRLTKANIRILPKENLP 412
E+R + A I I P E LP
Sbjct: 109 KEIREASGATITI-PSETLP 127
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 117/294 (39%), Gaps = 92/294 (31%)
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE 197
++ ++ S G +IGK G+ ++ +R E+GA I + S + + ++ I G
Sbjct: 4 EKLELHFIILSQDAGGIIGKEGRNIRQMRDESGANINV-------SGSTGVERILNIKGT 56
Query: 198 ASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG 257
+S VK A+ +A +L Q +L+
Sbjct: 57 SSEVKSAVRMVAEKL-------QEILSG-------------------------------- 77
Query: 258 GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
S + Y P +LRL+ P + G +IGKGG I +IR+ SGA I
Sbjct: 78 ----------SNNEYVPP--------VTLRLLVPNSQCGPLIGKGGQRIKEIREASGATI 119
Query: 318 KVDSSSTEGDD---------------CLITVSSKEFFED--TLSATIEAVVRLQPRC--S 358
+ S + G C+ + + FE+ ++ + PR
Sbjct: 120 TIPSETLPGSSERSVTLAGSPEALGLCIAKI--WDIFEEFPARQNNVQYFPNMYPRSMGP 177
Query: 359 EKIERDSGLISFT-------TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
++ SG +SFT ++ +P++ IG LIGKGG I E+R+ + A + +
Sbjct: 178 HQLSVMSGQLSFTGLSRRSEQKVRLPSNVIGSLIGKGGCHINEIRQFSGATVHV 231
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 31/155 (20%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDE--- 98
R L P + G +IG+GG+ +K++R + + I I ET+PGS ER VT+ + +
Sbjct: 86 VTLRLLVPNSQCGPLIGKGGQRIKEIREASGATITIPSETLPGSSERSVTLAGSPEALGL 145
Query: 99 --TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA-------------- 142
++ ++F PA+ + + + G HQ++
Sbjct: 146 CIAKIWDIFEEF--PARQNNVQYFPNMYPRSM-------GPHQLSVMSGQLSFTGLSRRS 196
Query: 143 --KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
K+ +PS+ IG +IGKGG + IR +GA + +
Sbjct: 197 EQKVRLPSNVIGSLIGKGGCHINEIRQFSGATVHV 231
>gi|33516919|sp|Q80WA4.1|NOVA1_RAT RecName: Full=RNA-binding protein Nova-1; AltName:
Full=Neuro-oncological ventral antigen 1
gi|30230625|gb|AAP20872.1| neuro-oncological ventral antigen 1-like protein [Rattus
norvegicus]
Length = 474
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 34 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 85
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 86 KSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 145
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ I ++GA +++ P + +V +
Sbjct: 146 I--KQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTV 198
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 199 SGEPEQNRKAVELIIQKIQEDP 220
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
++ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 107
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I +R P+ K E S L TT +++VP S G +IGKG
Sbjct: 108 L--NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKG 165
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + + A+ ++ +++
Sbjct: 166 GATVKAIMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVELIIQKIQ 217
Score = 42.4 bits (98), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 369 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 428
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 429 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 467
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 139/319 (43%), Gaps = 52/319 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKHICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLA-------SAISNSHSSSGSLVGPTA-ATPIVGIA------PLMGP 255
PS S + A + +++ G P T + +A P+
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDKAYTIQGQYAIPQPDLTKLHQLAVQQSHFPMTHG 235
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
G+ G + Y A D S++ S L P IG +IG GA IN+I Q SGA
Sbjct: 236 NTGFSGIESSSPEVKGYWAGLDA-SAQTTSHELTIPNDLIGCIIGCQGAKINEICQMSGA 294
Query: 316 AIKVDSSSTEGDDCLITVS 334
IK+ ++ D +T++
Sbjct: 295 LIKIANTVEGSTDRQVTIT 313
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
DGG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + + P + ++
Sbjct: 7 DGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI-SEGNCP------ERII 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS ++S LV
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNSTAASRPLV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|452989355|gb|EME89110.1| hypothetical protein MYCFIDRAFT_71441 [Pseudocercospora fijiensis
CIRAD86]
Length = 360
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 134/294 (45%), Gaps = 45/294 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR T + + + VPG +RV+TV A D
Sbjct: 44 RAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTGA---LTGISDA 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
V+ D+L K ++ + G+ ++ H + +LL+ +Q+G +IG+ G ++ I
Sbjct: 101 YGLVA---DSLVKGVPQMGMGGVVGNPNT---HPI--RLLISHNQMGTIIGRQGLKIKQI 152
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ +G ++ + + E LP R +V++ G V+KA+ +I L D+ R +
Sbjct: 153 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGVQKAVWEIGKCLIDDEQRGYGTVL- 207
Query: 226 AISNSHSSSGSLVGPTAATPIVGI-----APLMGPYGGYKGDTAGDWSRSLYSAPR---- 276
+S + + G A P+ G AP G D G S S Y R
Sbjct: 208 -----YSPAVRVQGGAPAPPLNGTGASYGAPRSYNRTGNGADFTGGQSPSSYPPRRNGPS 262
Query: 277 -----------DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+D+ ++ S+ P +G +IG+GG+ I++IR+ SGA I +
Sbjct: 263 DGGPPPRPEDGEDIQTQNISI----PADMVGCIIGRGGSKISEIRKSSGARISI 312
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 272 DGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKAPHDET----GERMFTI 327
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
+G + +KAL + L R +
Sbjct: 328 TGGPAANEKALYLLYENLEAEKMRRSQI 355
>gi|326925691|ref|XP_003209044.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Meleagris gallopavo]
Length = 502
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 172/391 (43%), Gaps = 58/391 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K L T+SK+ I + G+ E+ +T+++ + +
Sbjct: 118 DFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCS 177
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I + ++ + D + ++ K+L + +G +IGK G
Sbjct: 178 -------------EAC-----RMILDIMQKEADETKSAEEIPLKILAHNSLVGRLIGKEG 219
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I +TG +I I + L + + + G A +I +L ++N
Sbjct: 220 RNLKKIEQDTGTKITISPLQDL--TIYNPERTITVKGSTEACSNAEVEIMKKLREAYEND 277
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+ + A+ I + S+ + G++ M P A ++ P
Sbjct: 278 IVAVNQQANLIPGLNLSALGIFS-------TGLS--MLPSSVGARGAAAAAPYHPFALPE 328
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
++ + L P +G +IGK G I Q+ + +GA+IK+ + EG D +
Sbjct: 329 QEV------VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--APAEGPDATERMV-- 378
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + + VP+ G +IGKGG
Sbjct: 379 -----IITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKT 433
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + I+P++ P E++E++
Sbjct: 434 VNELQNLTSAEV-IVPRDQTP---DENEEVI 460
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE V P + +G+IIG+ G+ +KQL + I+I P + ER+V + + E
Sbjct: 327 PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMV-IITGPPE 385
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 386 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIKVPSFAAGRVIGKG 430
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 431 GKTVNELQNLTSAEVIVPRDQ 451
>gi|451172115|ref|NP_001094011.1| RNA-binding protein Nova-1 [Rattus norvegicus]
Length = 482
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 34 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 85
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 86 KSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 145
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ I ++GA +++ P + +V +
Sbjct: 146 I--KQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTV 198
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 199 SGEPEQNRKAVELIIQKIQEDP 220
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
++ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 107
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I +R P+ K E S L TT +++VP S G +IGKG
Sbjct: 108 L--NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKG 165
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + + A+ ++ +++
Sbjct: 166 GATVKAIMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVELIIQKIQ 217
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 369 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 428
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 429 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 467
>gi|449270977|gb|EMC81613.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Columba livia]
Length = 584
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 176/400 (44%), Gaps = 61/400 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +
Sbjct: 196 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS 255
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 256 T------------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEG 297
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 298 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRESYE 353
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
N + +L A I + ++ L P+++ + G S
Sbjct: 354 NDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVASAAAAASYPPFGQQPESE--- 410
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 411 ----------TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV 458
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGG 389
++ EA + Q R K++ ++ + + VP+ G +IGKGG
Sbjct: 459 -------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGG 511
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+ E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 512 KTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 547
Score = 42.0 bits (97), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 33/177 (18%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 407 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPE- 465
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIGCVI 155
A FK R+ + +E+ G + + A + VPS G VI
Sbjct: 466 ----------------AQFKAQGRIYGK--LKEENFFGPKEEVKLEAHIKVPSYAAGRVI 507
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
GKGG+ V +++ T A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 508 GKGGKTVNELQNLTSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQLAQR 555
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/210 (20%), Positives = 89/210 (42%), Gaps = 20/210 (9%)
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
+G G S + P+ D+ LR++ P +G +IGK GA I I +++ +
Sbjct: 174 FGQRGAPRQGSPSATTRQKPQSDVP-----LRMLVPTQFVGAIIGKEGATIRNITKQTQS 228
Query: 316 AIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFT---- 371
I + G + K T+ +T E E +++++ FT
Sbjct: 229 KIDIHRKENAG------AAEKPI---TIHSTPEGCSTACKIIMEIMQKEAQDTKFTEEIP 279
Query: 372 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLA 431
++L + +G LIGK G + ++ + T I I P ++L E + + G ++
Sbjct: 280 LKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPE--RTITVKGSIETC 337
Query: 432 KDALIQVMTRLRANLFDREGAVSTFVPVLP 461
A ++M ++R + + A++ ++P
Sbjct: 338 AKAEEEIMKKIRESYENDIAAMNLQAHLIP 367
>gi|403417714|emb|CCM04414.1| predicted protein [Fibroporia radiculosa]
Length = 420
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 122/266 (45%), Gaps = 44/266 (16%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+GG V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 134 IIGKGGSHVNEIREKSSARVMVSESIPGNPERILNVSGPLD--------------AVSKA 179
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 180 FGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLN-A 238
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH---SS 233
+ LP R ++ +SG A + A I + L + R L S ++S+ SS
Sbjct: 239 SEGMLPGSTER---VLSVSGVADAIHIATYYIGNILIEANER----LPSYNNSSYYRPSS 291
Query: 234 SGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVA 293
+ P ++ + G + Y G + G P L +++ + P
Sbjct: 292 NSRRPPPNGSSYVPGYS------NTYPGSSHG---------PPQQLQTQQ----IYIPND 332
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKV 319
+G +IGKGG+ IN+IR S + IK+
Sbjct: 333 LVGCIIGKGGSKINEIRHMSASNIKI 358
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 100/219 (45%), Gaps = 32/219 (14%)
Query: 26 RRYTGDDRDQ-FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVP 83
RR + D+ + G +++ P ++GS+IG+GG +K+++ + +++ E +P
Sbjct: 185 RRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLP 244
Query: 84 GSEERVVTVYSASDETN---------AFEDGDKFVSPAQDALFKVHDRVIAEELRGDE-- 132
GS ERV++V +D + E ++ S + ++ G
Sbjct: 245 GSTERVLSVSGVADAIHIATYYIGNILIEANERLPSYNNSSYYRPSSNSRRPPPNGSSYV 304
Query: 133 ---------DSDGGHQ--VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL 181
S G Q T ++ +P+D +GC+IGKGG + IR + + I+I++ +
Sbjct: 305 PGYSNTYPGSSHGPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASNIKIMEPGAV 364
Query: 182 -------PSCA-LRSDELVQISGEASVVKKALCQIASRL 212
P+ A + LV I+G+ + ++ A+ + RL
Sbjct: 365 GVGMNGAPAPAGGEGERLVVITGQPANIQMAVQLLYHRL 403
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 40/163 (24%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVS----- 334
S+ +++ + P + +G VIGKGGA I +I+ SGA + G + +++VS
Sbjct: 200 SRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADA 259
Query: 335 ---SKEFFEDTLSATIEAVVRL---------QPRCSEKIERDSGLISF------------ 370
+ + + L IEA RL +P + + +G
Sbjct: 260 IHIATYYIGNIL---IEANERLPSYNNSSYYRPSSNSRRPPPNGSSYVPGYSNTYPGSSH 316
Query: 371 -------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
T ++ +P +GC+IGKGGS I E+R ++ +NI+I+
Sbjct: 317 GPPQQLQTQQIYIPNDLVGCIIGKGGSKINEIRHMSASNIKIM 359
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 9/109 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG+ +N+IR++S A + V S + ++ VS D +S +VR R
Sbjct: 134 IIGKGGSHVNEIREKSSARVMVSESIPGNPERILNVSGP---LDAVSKAFGLIVR---RI 187
Query: 358 S-EKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ E ++ S G + T + ++P SR+G +IGKGG+ I E++ + A +
Sbjct: 188 NDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARL 236
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
R L+ T +IGKGGS + E+R K++ R++ E++P + ++ +SG LD
Sbjct: 123 RCLIVTQDASIIIGKGGSHVNEIRE--KSSARVMVSESIP---GNPERILNVSGPLDAVS 177
Query: 433 DALIQVMTRLRANLFDREGAV-STFVPVLPYIPVSENGS 470
A ++ R+ FD+ S V + IP S GS
Sbjct: 178 KAFGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGS 216
>gi|26336871|dbj|BAC32119.1| unnamed protein product [Mus musculus]
Length = 577
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 171/391 (43%), Gaps = 55/391 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+ S + L +H +D+ +V K+L ++ +G +IGK
Sbjct: 253 CS---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
G+ ++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE-- 349
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
++ +A+ SH G + AA + + P A +S S AP
Sbjct: 350 -AYENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPE 404
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+ +++ P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 405 QGM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV--- 455
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 456 ------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKT 509
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + ++P++ P E+D+++
Sbjct: 510 VNELQNLTAAEV-VVPRDQTP---DENDQVI 536
>gi|335297826|ref|XP_003358128.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Sus scrofa]
Length = 577
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREA--- 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|57530702|ref|NP_001006359.1| insulin-like growth factor 2 mRNA-binding protein 3 [Gallus gallus]
gi|82082638|sp|Q5ZLP8.1|IF2B3_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=VICKZ
family member 3
gi|53128909|emb|CAG31345.1| hypothetical protein RCJMB04_5e15 [Gallus gallus]
Length = 584
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 176/400 (44%), Gaps = 61/400 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +
Sbjct: 196 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS 255
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 256 T------------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEG 297
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 298 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRESYE 353
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
N + +L A I + ++ L P+++ + G S
Sbjct: 354 NDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVASAAAAASYPPFGQQPESE--- 410
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 411 ----------TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV 458
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGG 389
++ EA + Q R K++ ++ + + VP+ G +IGKGG
Sbjct: 459 -------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGG 511
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+ E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 512 KTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 547
Score = 42.0 bits (97), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 33/177 (18%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 407 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPE- 465
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIGCVI 155
A FK R+ + +E+ G + + A + VPS G VI
Sbjct: 466 ----------------AQFKAQGRIYGK--LKEENFFGPKEEVKLEAHIKVPSYAAGRVI 507
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
GKGG+ V +++ T A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 508 GKGGKTVNELQNLTSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQLAQR 555
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G S + P+ D+ LR++ P +G +IGK GA I I +++ + I +
Sbjct: 183 GSPSATTRQKPQSDVP-----LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN 237
Query: 325 EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFT----TRLLVPTSR 380
G + K T+ +T E E +++++ FT ++L +
Sbjct: 238 AG------AAEKPI---TIHSTPEGCSTACKIIMEIMQKEAQDTKFTEEIPLKILAHNNF 288
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
+G LIGK G + ++ + T I I P ++L E + + G ++ A ++M
Sbjct: 289 VGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPE--RTITVKGSIETCAKAEEEIMK 346
Query: 441 RLRANLFDREGAVSTFVPVLP 461
++R + + A++ ++P
Sbjct: 347 KIRESYENDIAAMNLQAHLIP 367
>gi|296081618|emb|CBI20623.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 90/173 (52%), Gaps = 18/173 (10%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDG 105
P ++G IIG+GGE +K L++ + +KI++ + P S R+V + D+
Sbjct: 142 IPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQ---IAKA 198
Query: 106 DKFVSPAQDALFKVH---DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
++ ++ D L + +++ L G G Q K VP++++G +IGKGG+ +
Sbjct: 199 EQLIN---DVLSEAEAGGSGIVSRRLTGQA---GSEQFVMK--VPNNKVGLIIGKGGETI 250
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
+N+++ TGA+I+++ HLP + VQI G + ++ A + + +N
Sbjct: 251 KNMQARTGARIQVIP-LHLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISEN 302
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-------DSSSTEGDDCLIT----V 333
S ++ P +G +IGKGG I ++ +SGA I+V +S T + + T
Sbjct: 137 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIA 196
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+++ D LS EA S ++ +G F + VP +++G +IGKGG I
Sbjct: 197 KAEQLINDVLS---EAEAGGSGIVSRRLTGQAGSEQFV--MKVPNNKVGLIIGKGGETIK 251
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISG---DLDLAKDALIQVMTRLR 443
M+ T A I+++P +LP + + VQI G ++ AK + +V++ R
Sbjct: 252 NMQARTGARIQVIPL-HLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISENR 303
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 55/185 (29%)
Query: 137 GHQVTAKLL-VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQI 194
G+Q T+K + +P+ ++G +IGKGG+ ++ ++ ++GA+I++ +D + P+ R LV++
Sbjct: 132 GYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTR---LVEL 188
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
G + KA + L+ +S + + +V
Sbjct: 189 MGTPDQIAKA---------------EQLINDVLSEAEAGGSGIV---------------- 217
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
SR L S++F +++ P +G +IGKGG I ++ +G
Sbjct: 218 -------------SRRL----TGQAGSEQFVMKV--PNNKVGLIIGKGGETIKNMQARTG 258
Query: 315 AAIKV 319
A I+V
Sbjct: 259 ARIQV 263
>gi|218184511|gb|EEC66938.1| hypothetical protein OsI_33565 [Oryza sativa Indica Group]
Length = 800
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 96/215 (44%), Gaps = 44/215 (20%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
G++RD P +V+R L P K+G++IG GE +++L +TK+ +R+ + ER
Sbjct: 229 GENRDPG--WPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERA 286
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSD 149
V ++ A E D+ PA DAL +V++ I ++ D + V A++L PS+
Sbjct: 287 VIIF-------AKEQPDEPKPPAIDALLRVYECTINDD---GLDVRYNNIVVARILTPSE 336
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRIL--------------------------------K 177
Q +IG G ++ I+ + I ++
Sbjct: 337 QAASLIGDQGSVINYIKKASKTNIHVIGNFLTLMHLLEPLVPSIDKFDISGLQLSIYTDA 396
Query: 178 DEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
D LP AL D +++I G + V +AL +A L
Sbjct: 397 DGDLPPVALEDDMIIEIWGLPARVHQALELVACHL 431
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 93/227 (40%), Gaps = 43/227 (18%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
R++ P +G VIG G + ++ +E+ A ++V + + + +KE ++
Sbjct: 242 FRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKPP 301
Query: 346 TIEAVVRLQPRCSEKIERDSGL-ISF----TTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
I+A++R+ E D GL + + R+L P+ + LIG GS+I +++ +K
Sbjct: 302 AIDALLRVY----ECTINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASK 357
Query: 401 ANIRIL--------------------------------PKENLPKIASEDDEMVQISGDL 428
NI ++ +LP +A EDD +++I G
Sbjct: 358 TNIHVIGNFLTLMHLLEPLVPSIDKFDISGLQLSIYTDADGDLPPVALEDDMIIEIWGLP 417
Query: 429 DLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYIPVSENGSDGLNY 475
AL V LR L R + F P + IP+S +Y
Sbjct: 418 ARVHQALELVACHLRKYLVHR-SVIPLFDPHVS-IPISPVDMPPFHY 462
>gi|328781397|ref|XP_392536.4| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Apis
mellifera]
Length = 482
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 35/194 (18%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P+KR GDD R L P + GSIIG+GG+ + +LR K+ I + +
Sbjct: 73 PHKRYRQGDDE-----------LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD-C 120
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
PG E RV+T+ S + +V + V+ L + G ++
Sbjct: 121 PGPE-RVLTISSD-----------------LPTVLQVLNEVVPN-LEENGSRHGSDEIDV 161
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++LV Q GC+IGKGG ++ +R +TGA+I+I C +D L+ I G+ +
Sbjct: 162 RMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPTTCI 217
Query: 203 KALCQIASRLHDNP 216
+ + ++ + + +P
Sbjct: 218 ECIRELIATIKTSP 231
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
++P + LRL+ P G +IGKGG I ++R + A+I V G + ++T
Sbjct: 71 TSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV--PDCPGPERVLT 128
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+SS L ++ + + P E R G R+LV S+ GC+IGKGG I
Sbjct: 129 ISSD------LPTVLQVLNEVVPNLEENGSR-HGSDEIDVRMLVHQSQAGCIIGKGGLKI 181
Query: 393 TEMRRLTKANIRI 405
E+R T A I+I
Sbjct: 182 KELREKTGARIKI 194
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+ T ++ +P D G +IGKGG ++ +RS++GA I I DE L +D ++ I+G
Sbjct: 407 KTTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI--DEPLSG---SNDRIITITGLP 461
Query: 199 SVVKKALCQIASRLHDN 215
S ++ A + +H+N
Sbjct: 462 SQIQMAQYLLQQSVHEN 478
>gi|449449385|ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 126/283 (44%), Gaps = 42/283 (14%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + ++I++ E PG+ +R++ V + +E
Sbjct: 35 TYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINE- 93
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAE---ELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+ K + V+A+ EL +E D + +L+VP G +IG
Sbjct: 94 ----------------ILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIG 137
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG +++ ++ A I+I ++ + +D LV +SG +A I S+L ++P
Sbjct: 138 KGGSTIKSFIEDSQAGIKISPQDN--NYMASTDRLVTLSGTIEEQMRATDLIVSKLSEDP 195
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+Q + + PT+ + + G G ++ + S + R
Sbjct: 196 HYTQSM-----------NYPFSYPTSFNAMNYGSNGGGTGGRFQNNKPDTRSSEIVQEER 244
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
++ SL + +IG V+G+GG I +I Q SGA IK+
Sbjct: 245 NN------SLTIGVSDGHIGLVVGRGGRNILEISQASGARIKI 281
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 78/170 (45%), Gaps = 28/170 (16%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT--- 342
+R + A G VIGKGG+ IN + +SGA I++ + EFF T
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRN-------------HEFFPGTTDR 83
Query: 343 ---LSATIEAVVRLQPRCSEKI-------ERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+S +I +++ K+ E D RL+VP S G +IGKGGS I
Sbjct: 84 IIMVSGSINEILKAMELVLAKLLSELHAEEGDDVEPRTKVRLIVPHSSCGAIIGKGGSTI 143
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
++A I+I P++N + D +V +SG ++ A ++++L
Sbjct: 144 KSFIEDSQAGIKISPQDN--NYMASTDRLVTLSGTIEEQMRATDLIVSKL 191
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 96/200 (48%), Gaps = 42/200 (21%)
Query: 22 GPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET 81
GP KR Y D ++ R L P + GSIIG+GG + +LR + + + + +
Sbjct: 12 GPQKR-YKNSDGNEI---------RLLIPSKVAGSIIGKGGHNISKLRTEHNASVTVPDC 61
Query: 82 VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVT 141
PG E R++TV + D D + RV++E L ED +
Sbjct: 62 -PGPE-RILTVAA---------DLDTML------------RVVSEILPNLEDV-----ID 93
Query: 142 AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVV 201
++LV Q GC+IGKGG ++ +R +TGA+I+I + C +D +VQI+G+ ++
Sbjct: 94 IRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSN----CCPQSTDRIVQINGKGNLC 149
Query: 202 KKALCQIASRLHDNPSRSQH 221
A+ + L +P + +
Sbjct: 150 VDAIRECMELLKTSPIKGMN 169
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 21/159 (13%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
+RL+ P G +IGKGG I+++R E A++ V G + ++TV++ L
Sbjct: 25 IRLLIPSKVAGSIIGKGGHNISKLRTEHNASVTV--PDCPGPERILTVAAD------LDT 76
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ V + P + I+ R+LV S+ GC+IGKGG I E+R T A I+I
Sbjct: 77 MLRVVSEILPNLEDVID---------IRMLVHQSQAGCIIGKGGLKIKELREKTGARIKI 127
Query: 406 LPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
D +VQI+G +L DA+ + M L+
Sbjct: 128 YSN----CCPQSTDRIVQINGKGNLCVDAIRECMELLKT 162
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
GG + + ++ +P D G +IGKGG ++ IR E+GA I I DE LP +D ++ IS
Sbjct: 287 GGEKNSTQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITI--DEPLPG---SNDRIITIS 341
Query: 196 GEASVVKKALCQIASRL 212
G + ++ A + RL
Sbjct: 342 GTPNQIQMAQYLLQQRL 358
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
L ++ S ++ P G +IGKGG+ I +IR ESGAAI +D +D +IT+S
Sbjct: 286 LGGEKNSTQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITIS 341
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 37/61 (60%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASD 97
+G E + P G+IIG+GG ++++R+++ + I I E +PGS +R++T+ +
Sbjct: 286 LGGEKNSTQVTIPKDLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITISGTPN 345
Query: 98 E 98
+
Sbjct: 346 Q 346
>gi|56549651|ref|NP_006480.2| RNA-binding protein Nova-1 isoform 2 [Homo sapiens]
gi|119586394|gb|EAW65990.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
gi|119586396|gb|EAW65992.1| neuro-oncological ventral antigen 1, isoform CRA_a [Homo sapiens]
Length = 483
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 35 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 87 KSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 146
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ + ++GA +++ P + +V +
Sbjct: 147 I--KQV--KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPDGINLQERVVTV 199
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 200 SGEPEQNRKAVELIIQKIQEDP 221
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
++ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I +R P+ K E S L TT +++VP S G +IGKG
Sbjct: 109 L--NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKG 166
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + + A+ ++ +++
Sbjct: 167 GATVKAVMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVELIIQKIQ 218
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 370 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 429
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 430 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 468
>gi|7141072|gb|AAF37203.1|AF198254_1 mRNA-binding protein CRDBP [Homo sapiens]
Length = 577
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKTLAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH + G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLTPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|449492580|ref|XP_002192437.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Taeniopygia guttata]
Length = 584
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 176/400 (44%), Gaps = 61/400 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +
Sbjct: 196 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS 255
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 256 T------------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEG 297
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 298 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRESYE 353
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
N + +L A I + ++ L P+++ + G S
Sbjct: 354 NDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVASAAAAASYPPFGQQPESE--- 410
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 411 ----------TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV 458
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGG 389
++ EA + Q R K++ ++ + + VP+ G +IGKGG
Sbjct: 459 -------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGG 511
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+ E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 512 KTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 547
Score = 42.0 bits (97), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 33/177 (18%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 407 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPE- 465
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIGCVI 155
A FK R+ + +E+ G + + A + VPS G VI
Sbjct: 466 ----------------AQFKAQGRIYGK--LKEENFFGPKEEVKLEAHIKVPSYAAGRVI 507
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
GKGG+ V +++ T A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 508 GKGGKTVNELQNLTSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQLAQR 555
>gi|383849051|ref|XP_003700160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Megachile rotundata]
Length = 460
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 90/194 (46%), Gaps = 35/194 (18%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P+KR GDD R L P + GSIIG+GG+ + +LR K+ I + +
Sbjct: 38 PHKRYRQGDDE-----------LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD-C 85
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
PG E RV+T+ S + +V + V+ L + G ++
Sbjct: 86 PGPE-RVLTISSD-----------------LPTVLQVLNEVVPN-LEENGSRHGSDEIDV 126
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++LV Q GC+IGKGG ++ +R +TGA+I+I C +D L+ I G+ S
Sbjct: 127 RMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPSTCI 182
Query: 203 KALCQIASRLHDNP 216
+ ++ + + +P
Sbjct: 183 DCIRELIATIKTSP 196
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
++P + LRL+ P G +IGKGG I ++R + A+I V G + ++T
Sbjct: 36 TSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV--PDCPGPERVLT 93
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+SS L ++ + + P E R G R+LV S+ GC+IGKGG I
Sbjct: 94 ISSD------LPTVLQVLNEVVPNLEENGSR-HGSDEIDVRMLVHQSQAGCIIGKGGLKI 146
Query: 393 TEMRRLTKANIRI 405
E+R T A I+I
Sbjct: 147 KELREKTGARIKI 159
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 5/87 (5%)
Query: 129 RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
+G++ + G ++ + ++ +P D G +IGKGG ++ IRS++GA I I DE LP +
Sbjct: 375 QGNQGNMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITI--DEPLPG---SN 429
Query: 189 DELVQISGEASVVKKALCQIASRLHDN 215
D ++ I+G S ++ A + +H+N
Sbjct: 430 DRIITITGLPSQIQMAQYLLQQSVHEN 456
Score = 42.0 bits (97), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 28 YTGDDR-DQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE 86
TG+++ +Q +G T + P G+IIG+GG ++++R D+ + I I E +PGS
Sbjct: 370 MTGNNQGNQGNMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSN 429
Query: 87 ERVVTV 92
+R++T+
Sbjct: 430 DRIITI 435
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
++ S + S ++ P G +IGKGGA I +IR +SGA I +D +D +IT++
Sbjct: 380 NMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDRIITIT 436
>gi|302564995|ref|NP_001180850.1| insulin-like growth factor 2 mRNA-binding protein 1 [Macaca
mulatta]
Length = 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREA--- 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|326935820|ref|XP_003213964.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Meleagris
gallopavo]
Length = 232
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 28/194 (14%)
Query: 27 RYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE 86
R +G Q I R L ++IGSIIG+ GE VK++R + ++I I E
Sbjct: 6 RASGPREPQLSI---TLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG--SCP 60
Query: 87 ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI--AEELRGDEDSDGGHQVTAKL 144
ER+ T+ ++D A+F+ + EE GD + G VT +L
Sbjct: 61 ERITTITGSTD-----------------AVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRL 103
Query: 145 LVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
++P+ Q G +IGK G ++ IR +GAQ+++ D LP+ R+ V +SG + +
Sbjct: 104 VIPASQCGSLIGKAGTKIREIRESSGAQVQVAGD-LLPNSTERA---VTVSGVPDTIIQC 159
Query: 205 LCQIASRLHDNPSR 218
+ QI + + ++P +
Sbjct: 160 VRQICAVILESPPK 173
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 95/198 (47%), Gaps = 30/198 (15%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
S PR+ S +LR++ IG +IGK G + +IR++S A I + S C
Sbjct: 8 SGPREPQLSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEGS-----CPER 62
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERD------SGLISFTTRLLVPTSRIGCLIG 386
++ T++ + +AV R + K+E D +G T RL++P S+ G LIG
Sbjct: 63 IT-------TITGSTDAVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRLVIPASQCGSLIG 115
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
K G+ I E+R + A +++ + LP + + V +SG D +IQ + ++ A +
Sbjct: 116 KAGTKIREIRESSGAQVQVA-GDLLP---NSTERAVTVSG----VPDTIIQCVRQICAVI 167
Query: 447 FDREGAVSTFVPVLPYIP 464
+ +T +PY P
Sbjct: 168 LESPPKGAT----IPYHP 181
>gi|348562599|ref|XP_003467097.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cavia porcellus]
Length = 599
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/395 (21%), Positives = 175/395 (44%), Gaps = 68/395 (17%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 218 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 277
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ R+I E + + +D+ +V K+L ++ +G +IGK G
Sbjct: 278 SA------------------CRMILEIMHKEAKDTKTADEVPLKILAHNNFVGRLIGKEG 319
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ + +T +I I L+D L + + + G +A +I ++ ++
Sbjct: 320 RNLKKVEQDTDTKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREAYE 375
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG--PYGGYKGDTAGDWSRSLY 272
N + L + I + ++ L +++ + + G PY S +
Sbjct: 376 NDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPY-------------SSF 422
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
AP ++ +++ P +G +IGK G I Q+ + + A+IK+ T +
Sbjct: 423 MAPEQEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMV 476
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ ++ EA + Q R K++ ++ + T + VP S G +IGK
Sbjct: 477 I---------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGK 527
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
GG + E++ LT A + ++P++ P E+D+++
Sbjct: 528 GGKTVNELQNLTAAEV-VVPRDQTP---DENDQVI 558
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 31/151 (20%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV--- 92
+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 422 FMAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP 481
Query: 93 ----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPS 148
+ A + F P ++ + H R VP+
Sbjct: 482 PEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VPA 518
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
G VIGKGG+ V +++ T A++ + +D+
Sbjct: 519 SAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 549
>gi|403279506|ref|XP_003931289.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Saimiri boliviensis boliviensis]
Length = 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREA--- 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|340718655|ref|XP_003397779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
terrestris]
Length = 466
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 35/194 (18%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P+KR GDD R L P + GSIIG+GG+ + +LR K+ I + +
Sbjct: 52 PHKRYRQGDDE-----------LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD-C 99
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
PG E RV+T+ S + +V + V+ L + G ++
Sbjct: 100 PGPE-RVLTISSD-----------------LPTVLQVLNEVVPN-LEENGSRHGSDEIDV 140
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++LV Q GC+IGKGG ++ +R +TGA+I+I C +D L+ I G+ +
Sbjct: 141 RMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPNTCI 196
Query: 203 KALCQIASRLHDNP 216
+ + ++ + + +P
Sbjct: 197 ECIRELIATIKTSP 210
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
++P + LRL+ P G +IGKGG I ++R + A+I V G + ++T
Sbjct: 50 TSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV--PDCPGPERVLT 107
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+SS L ++ + + P E R G R+LV S+ GC+IGKGG I
Sbjct: 108 ISSD------LPTVLQVLNEVVPNLEENGSR-HGSDEIDVRMLVHQSQAGCIIGKGGLKI 160
Query: 393 TEMRRLTKANIRI 405
E+R T A I+I
Sbjct: 161 KELREKTGARIKI 173
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+ T ++ +P D G +IGKGG ++ +RS++GA I I DE L + +D ++ I+G
Sbjct: 391 KTTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI--DEPL---SGSNDRIITITGLP 445
Query: 199 SVVKKALCQIASRLHDN 215
S ++ A + +H+N
Sbjct: 446 SQIQMAQYLLQQSVHEN 462
>gi|324519086|gb|ADY47282.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 342
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 86/178 (48%), Gaps = 22/178 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFED 104
R L +++GSIIG+ G+ +K +R + +KI I + GS ER+VT+ D N
Sbjct: 26 RLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISD---GSCPERIVTITGNVDTINK--- 79
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
F + E+++ +S +T +L+VP+ Q G +IGKGG ++
Sbjct: 80 -----------AFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKE 128
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
IR TGA I++ E LPS R+ V ISG A + + I L + P + L
Sbjct: 129 IREATGASIQV-ASEMLPSSTERA---VTISGSADAIVLCMQHICHILLEAPPKGTTL 182
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 17/181 (9%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G I IR SGA I + S + ++T++ DT+
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDGSCP--ERIVTITGNV---DTI 77
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ + + + T RL+VP ++ G LIGKGGS I E+R T A+I
Sbjct: 78 NKAFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASI 137
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYI 463
++ E LP S + V ISG + DA++ M + L + +T LPY
Sbjct: 138 QVA-SEMLP---SSTERAVTISG----SADAIVLCMQHICHILLEAPPKGTT----LPYR 185
Query: 464 P 464
P
Sbjct: 186 P 186
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 67/190 (35%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G +++IR +GA+I I D P + +V I+G
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINI-SDGSCP------ERIVTITGNVD 75
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I ++ ++ A+ N
Sbjct: 76 TINKAFSMICNKFQED--------MQALPN------------------------------ 97
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S P+ ++ +RL+ P G +IGKGG+ I +IR+ +GA+I+V
Sbjct: 98 -------------SVPKPPIT-----MRLIVPATQCGSLIGKGGSKIKEIREATGASIQV 139
Query: 320 DS----SSTE 325
S SSTE
Sbjct: 140 ASEMLPSSTE 149
>gi|348537889|ref|XP_003456425.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oreochromis
niloticus]
Length = 496
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 36/223 (16%)
Query: 25 KRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET--- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 23 KRTNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDF 74
Query: 82 VPGSEERVVTVYSASDETNAFED--GDKF------------VSPAQDALFKVHDRV---- 123
PG+ ERV + + N D +K VS Q DRV
Sbjct: 75 YPGTTERVCLIQGTVEALNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQTL 134
Query: 124 -IAEELRGDEDSD---GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
A ED++ +AKL+VP+ G +IGKGG V+ + ++GA +++ +
Sbjct: 135 PTACHTTPKEDANPEKSRRANSAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK- 193
Query: 180 HLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
P + +V ISGE +KA+ I ++ ++P S L
Sbjct: 194 --PEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSSCL 234
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 24/178 (13%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+L+PS G +IGKGGQ + ++ ETGA I++ K + P ++ + I G +
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT---TERVCLIQGTVEAL 92
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
IA ++ + P +Q +I ++ V P + A P K
Sbjct: 93 NGVHDFIAEKVREMPQSTQKTEPVSILQPQTT----VNPDRVKQTLPTACHTTP----KE 144
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D + SR SA +L+ P + G +IGKGGA + + ++SGA +++
Sbjct: 145 DANPEKSRRANSA------------KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL 190
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 93/197 (47%), Gaps = 39/197 (19%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLI--TVSS 335
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI TV +
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 91
Query: 336 KEFFEDTLSATI----------EAVVRLQPRCS---EKIERDSGLISFTT---------- 372
D ++ + E V LQP+ + +++++ TT
Sbjct: 92 LNGVHDFIAEKVREMPQSTQKTEPVSILQPQTTVNPDRVKQTLPTACHTTPKEDANPEKS 151
Query: 373 ------RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
+L+VP S G +IGKGG+ + + + A +++ K P+ + + +V ISG
Sbjct: 152 RRANSAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISG 208
Query: 427 DLDLAKDALIQVMTRLR 443
+ + + A+ ++ +++
Sbjct: 209 EPEQNRKAVEIIVQKIQ 225
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 383 ATNGYLSAASPLVASSLLATEKLAEGAKEVVEIAVPENLVGAILGKGGKTLVEYQELTGA 442
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 443 RIQISKKGEFIPGTRNRK---VTITGSQAATQAAQYLISQRI 481
>gi|348521966|ref|XP_003448497.1| PREDICTED: far upstream element-binding protein 1 [Oreochromis
niloticus]
Length = 631
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 156/403 (38%), Gaps = 88/403 (21%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P T + P +G IIGRGGE + +L+ ++ KI+I G +R VT+ +
Sbjct: 85 PRSTSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTGLPES- 143
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ A+ L ++ ++ +DG +++VP+ + G VIGKGG
Sbjct: 144 ---------IQTAKRLLTEIVEK--GRPAPAFHHNDGPGMTVQEIMVPASKAGLVIGKGG 192
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ +++++ G ++ +++D + A D+ ++ISGE V++A + + D R
Sbjct: 193 ETIKSLQERAGVKMVMIQDGPQNTGA---DKPLRISGEPFKVQQAKEMVMELIRDQGFRE 249
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
Q G Y GD
Sbjct: 250 QR-----------------------------------GEYGSRIGGD------------- 261
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV------ 333
SL + P +G VIG+ G +I +I+ ++G I+ D + +
Sbjct: 262 -----SLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGTTPDRIAQIMGPPDQ 316
Query: 334 --SSKEFFEDTLSAT--------IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
+ E D L + R + + + + GL FT VPT + G
Sbjct: 317 AQHAAEIISDLLRSVQAGGPPGHGGGRGRGRGQGNWNMGPPGGLQEFT--FTVPTMKTGL 374
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
+IGKGG I + + + A I + + N P A + +M + G
Sbjct: 375 IIGKGGETIKGISQQSGARIEL--QRNPPPNADPNIKMFTVRG 415
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 20/174 (11%)
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+S+EF + P +G +IG+GG I++++QESG I++ S D +T++
Sbjct: 88 TSEEFKV----PDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTG---- 139
Query: 340 EDTLSATIEAVVRLQPRCSEK------IERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
L +I+ RL EK + G ++VP S+ G +IGKGG I
Sbjct: 140 ---LPESIQTAKRLLTEIVEKGRPAPAFHHNDGPGMTVQEIMVPASKAGLVIGKGGETIK 196
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
++ +A ++++ ++ P+ D + +ISG+ + A VM +R F
Sbjct: 197 SLQE--RAGVKMVMIQDGPQNTGADKPL-RISGEPFKVQQAKEMVMELIRDQGF 247
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 71/304 (23%), Positives = 117/304 (38%), Gaps = 71/304 (23%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP TV + P K G +IG+GGE +K L+ K+ V +
Sbjct: 169 GPGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKM-------------VMIQDGPQN 215
Query: 99 TNAFE----DGDKF-VSPAQDALFKVHDRVIAEELRGDEDSD-GGHQVTAKLLVPSDQIG 152
T A + G+ F V A++ + ++ E RG+ S GG + + VP +G
Sbjct: 216 TGADKPLRISGEPFKVQQAKEMVMELIRDQGFREQRGEYGSRIGGDSL--DVPVPRFAVG 273
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
VIG+ G++++ I+++TG +I+ D+ D + QI G
Sbjct: 274 IVIGRNGEMIKKIQNDTGVRIQFKPDD-----GTTPDRIAQIMGP--------------- 313
Query: 213 HDNPSRSQH---LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
P ++QH +++ + + + G MGP GG
Sbjct: 314 ---PDQAQHAAEIISDLLRSVQAGGPPGHGGGRGRGRGQGNWNMGPPGGL---------- 360
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
+EF+ P G +IGKGG I I Q+SGA I++ + D
Sbjct: 361 ------------QEFT--FTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNADP 406
Query: 330 LITV 333
I +
Sbjct: 407 NIKM 410
>gi|326378247|gb|ADZ57223.1| neuro-oncological ventral antigen [Branchiostoma lanceolatum]
Length = 508
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 99/187 (52%), Gaps = 23/187 (12%)
Query: 39 GPED--TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVY 93
GPED + + L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ER+V +
Sbjct: 60 GPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVIT 119
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ D + + KF+ + + +E+ + +++ QV K++VP+ G
Sbjct: 120 GSED---SLKSVHKFLMEKIGQAPRPPAKSPSEQ---NANNNRAKQV--KIVVPNSTAGL 171
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDE----HLPSCALRSDELVQISGEASVVKKALCQIA 209
+IGKGG ++ I +TG++++I + +LP + ++ I+GE KA I
Sbjct: 172 IIGKGGATIKFIMEQTGSRVQISQKATSGINLP------ERVITITGEPEQNDKACAFIV 225
Query: 210 SRLHDNP 216
+++ ++P
Sbjct: 226 NKIVEDP 232
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 90/213 (42%), Gaps = 57/213 (26%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDELVQISGE 197
Q+ K+L+PS G +IGKGGQ + ++ ETGA I++ K ++ P ++ +V I+G
Sbjct: 65 QLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGT---TERIVVITGS 121
Query: 198 ASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG 257
+K + ++ P P A +P
Sbjct: 122 EDSLKSVHKFLMEKIGQAPR----------------------PPAKSP------------ 147
Query: 258 GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
+ ++ +++ +++V P + G +IGKGGA I I +++G+ +
Sbjct: 148 ----------------SEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRV 191
Query: 318 KVDSSSTEGDDC---LITVSSKEFFEDTLSATI 347
++ +T G + +IT++ + D A I
Sbjct: 192 QISQKATSGINLPERVITITGEPEQNDKACAFI 224
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 81/170 (47%), Gaps = 16/170 (9%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST----EGDDCLITVSSKEF 338
+ L+++ P G +IGKGG I Q+++E+GA IK+ S+ + ++ S++
Sbjct: 65 QLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDS 124
Query: 339 FEDTLSATIEAVVRL--QPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ +E + + P S + + + +++VP S G +IGKGG+ I +
Sbjct: 125 LKSVHKFLMEKIGQAPRPPAKSPSEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIM 184
Query: 397 RLTKANIRILPKE----NLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
T + ++I K NLP + ++ I+G+ + A ++ ++
Sbjct: 185 EQTGSRVQISQKATSGINLP------ERVITITGEPEQNDKACAFIVNKI 228
>gi|149723930|ref|XP_001502310.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Equus caballus]
Length = 577
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|115489418|ref|NP_001067196.1| Os12g0597600 [Oryza sativa Japonica Group]
gi|113649703|dbj|BAF30215.1| Os12g0597600, partial [Oryza sativa Japonica Group]
Length = 367
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 75/129 (58%), Gaps = 12/129 (9%)
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRC-------SEKIERDSGLISFTTRLLVPTSRI 381
C + +S+K+ + L ++ ++R+ R S++ +R +G + TRLLVP S+
Sbjct: 10 CPVMISAKDEPDAPLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVG-PTRLLVPASQA 68
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD-LDLAKDALIQVMT 440
G LIGK G+ I ++ +K +RIL E++P +A DD +V+I G+ LD+ K A+ + +
Sbjct: 69 GSLIGKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHK-AVELIAS 125
Query: 441 RLRANLFDR 449
LR L DR
Sbjct: 126 HLRKFLVDR 134
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD---GGHQVTAKLLVPSDQIGCVIG 156
+A ++ D + PA D L +VH R I + L G+ D G +LLVP+ Q G +IG
Sbjct: 15 SAKDEPDAPLPPAVDGLLRVHKR-ITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIG 73
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G +++I+ + +RIL E +P AL D +V+I GE V KA+ IAS L
Sbjct: 74 KQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHL 127
>gi|194701786|gb|ACF84977.1| unknown [Zea mays]
Length = 344
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 146/347 (42%), Gaps = 49/347 (14%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSE 86
GDD+++ I R+L G IIG+GG + + + ++I++ E PG+
Sbjct: 33 GDDKEKPI------HLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTN 86
Query: 87 ERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+R++ V E A+ + ++++AE G+E ++ + +L+V
Sbjct: 87 DRIIMVSGLFGEV-------------MKAMELILEKLLAE---GEEFNEAEARPKVRLVV 130
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
P+ G +IGKGG +++ E+ A I+I ++ + D LV ++G A+
Sbjct: 131 PNSSCGGIIGKGGATIKSFIEESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAID 188
Query: 207 QIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM--------GPYGG 258
I +L S H A+ +S+ +G P+ + P + GP G
Sbjct: 189 LILKKL----SEDVHYPAN-LSSPFPYAGLTFPSYPGVPVGYMIPQVPYNNAVNYGPNNG 243
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAA 316
Y G + + S P +S E L +A+ IG V+G+ G I +I Q SGA
Sbjct: 244 Y----GGRYQNNKPSTPMRSPASNEAQESLTIGIADEHIGAVVGRAGRNITEIIQASGAR 299
Query: 317 IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
IK+ S GD T K T A A + R S ER
Sbjct: 300 IKI---SDRGDFISGTSDRKVTITGTSEAIRTAESMIMQRVSASSER 343
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 16/197 (8%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE---GDDCLITVS 334
D K LR + A+ G +IGKGG+ IN + +SGA I++ S +D +I VS
Sbjct: 34 DDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS 93
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
F + + A +E + L+ +E E + RL+VP S G +IGKGG+ I
Sbjct: 94 G--LFGEVMKA-MELI--LEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKS 148
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVS 454
+ A I+I P++N D +V ++G D +A+ ++ +L ++ S
Sbjct: 149 FIEESHAGIKISPQDN--NYVGLHDRLVTVTGTFDNQMNAIDLILKKLSEDVHYPANLSS 206
Query: 455 TF------VPVLPYIPV 465
F P P +PV
Sbjct: 207 PFPYAGLTFPSYPGVPV 223
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSD 189
+E D + + LV + GC+IGKGG + + +S++GA+I++ + E P +D
Sbjct: 31 EEGDDKEKPIHLRFLVSNASAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGT---ND 87
Query: 190 ELVQISGEASVVKKALCQIASRL 212
++ +SG V KA+ I +L
Sbjct: 88 RIIMVSGLFGEVMKAMELILEKL 110
>gi|85838458|gb|ABC86135.1| nova [Paracentrotus lividus]
Length = 553
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 93/176 (52%), Gaps = 14/176 (7%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETN 100
+ + L P GSIIG+GG+ + QL+ DT + +++ + PG++ERV + + N
Sbjct: 75 ILKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGPVESLN 134
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+ FV ++ + AE + E + QV K++VP+ G +IGKGG
Sbjct: 135 ---NVAVFVLEKIKESPQLGVKAGAETITSPERA---RQV--KIVVPNSTAGLIIGKGGA 186
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
++++I ++G++++I + S+ ++ ISGE +KA+ I +++ ++P
Sbjct: 187 MIKSIMEQSGSRVQISQKSD---GITLSERVITISGEPENNRKAMSFIVNKIQEDP 239
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 94/193 (48%), Gaps = 38/193 (19%)
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
+L P DD ++ L+++ P G +IGKGG I Q+++++G +K+ ++
Sbjct: 63 NLGPGPVDD---NKYILKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKAN------ 113
Query: 330 LITVSSKEFFEDT------LSATIEAVVRLQPRCSEKIERD------SGLISFTT----- 372
+F+ T L+ +E++ + EKI+ +G + T+
Sbjct: 114 -------DFYPGTQERVALLTGPVESLNNVAVFVLEKIKESPQLGVKAGAETITSPERAR 166
Query: 373 --RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
+++VP S G +IGKGG++I + + + ++I K + ++ + ++ ISG+ +
Sbjct: 167 QVKIVVPNSTAGLIIGKGGAMIKSIMEQSGSRVQISQKSDGITLS---ERVITISGEPEN 223
Query: 431 AKDALIQVMTRLR 443
+ A+ ++ +++
Sbjct: 224 NRKAMSFIVNKIQ 236
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL 435
VP + +G ++GKGG + E + LT A I+I K + + V I+G + A++A
Sbjct: 476 VPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEY--VPGTRNRRVTITGPVTAAQNAH 533
Query: 436 IQVMTRL 442
+M RL
Sbjct: 534 FLIMQRL 540
>gi|90652817|ref|NP_001035073.1| uncharacterized protein LOC664755 [Danio rerio]
gi|68533566|gb|AAH98540.1| Zgc:110045 [Danio rerio]
Length = 222
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 91/175 (52%), Gaps = 21/175 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET-NAFED 104
R L +++GSIIG+ GE VK++R ++ ++I I + S ER+VT+ AS+ AF
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISDG--SSPERIVTITGASEVIFKAFAM 77
Query: 105 -GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
+KF +D L + + + VT +L+ P+ Q G +IGKGG ++
Sbjct: 78 IAEKF---EEDILASMINSTVTSR----------PPVTLRLVFPASQCGSLIGKGGSKIK 124
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
IR TGAQ+++ D LP R+ V ISG + + + I + + ++P +
Sbjct: 125 EIRESTGAQVQVAGD-LLPDSTERA---VTISGTPHAITQCVKHICTVMLESPPK 175
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 24/133 (18%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF---- 339
++RL+ +G +IGK G + ++R+ESGA I + S+ IT +S+ F
Sbjct: 17 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISDGSSPERIVTITGASEVIFKAFA 76
Query: 340 -------EDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
ED L++ I + V +P T RL+ P S+ G LIGKGGS I
Sbjct: 77 MIAEKFEEDILASMINSTVTSRP-------------PVTLRLVFPASQCGSLIGKGGSKI 123
Query: 393 TEMRRLTKANIRI 405
E+R T A +++
Sbjct: 124 KEIRESTGAQVQV 136
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I D P + +
Sbjct: 9 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SDGSSP------ERI 61
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + V+ KA IA + ++ +LAS I+++ +S +
Sbjct: 62 VTITGASEVIFKAFAMIAEKFEED------ILASMINSTVTSRPPV-------------- 101
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 102 ---------------------------------TLRLVFPASQCGSLIGKGGSKIKEIRE 128
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 129 STGAQVQV 136
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 9/167 (5%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GEIVK+ R ++ +KI I + ER+VTV ++ + F+
Sbjct: 29 KEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGPTN--SIFKAFTLICKK 84
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
++ + HD + G +T +L+VP+ Q G +IGKGG ++ IR TGA
Sbjct: 85 FEEWCSQFHD-IQGGGNAGGGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 143
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
I++ E LP+ R+ V ISG + + + + I + ++P +
Sbjct: 144 SIQV-ASEMLPNSTERA---VTISGTSEAITQCIYHICCVMLESPPK 186
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 26/203 (12%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+D S ++RL+ +G +IGK G I+ + R+ESGA I + S +T +
Sbjct: 13 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDGSCPERIVTVTGPTN 72
Query: 337 EFFEDTLSATIEAVVRLQPRCSE--KIERDSGLIS--------FTTRLLVPTSRIGCLIG 386
F+ A + + CS+ I+ T RL+VP S+ G LIG
Sbjct: 73 SIFK----AFTLICKKFEEWCSQFHDIQGGGNAGGGGGVPRPPITLRLIVPASQCGSLIG 128
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANL 446
KGGS I E+R +T A+I++ E LP + + V ISG +A+ Q + + +
Sbjct: 129 KGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISG----TSEAITQCIYHICCVM 180
Query: 447 FDREGAVSTFVPVLPYIPVSENG 469
+ +T +PY P + G
Sbjct: 181 LESPPKGAT----IPYRPKPQVG 199
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + VP IGC+IGKGG+ I E+R+++ A IRI E + D + I+G+ D
Sbjct: 281 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGPTDRTITITGNPDS 338
Query: 431 AKDA--LIQVMTRL-RANL 446
A LI + L +ANL
Sbjct: 339 VALAQYLINMSVELQKANL 357
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + GS+IG+GG +K++R T + I++ E +P S ER VT+ S+
Sbjct: 113 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTISGTSE 167
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ D +T +L++ ++G +IGK G+IV+ R E+GA+I I D P + +V
Sbjct: 13 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI-SDGSCP------ERIV 65
Query: 193 QISGEASVVKKALCQIASRLHD 214
++G + + KA I + +
Sbjct: 66 TVTGPTNSIFKAFTLICKKFEE 87
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 99/187 (52%), Gaps = 23/187 (12%)
Query: 39 GPED--TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVY 93
GPED + + L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ER+V +
Sbjct: 60 GPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVIT 119
Query: 94 SASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
+ D + + KF+ + + +E+ + +++ QV K++VP+ G
Sbjct: 120 GSED---SLKSVHKFLMEKISQAPQPPAKSPSEQ---NANNNRAKQV--KIVVPNSTAGL 171
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDE----HLPSCALRSDELVQISGEASVVKKALCQIA 209
+IGKGG ++ I +TG++++I + +LP + ++ I+GE KA I
Sbjct: 172 IIGKGGATIKFIMEQTGSRVQISQKATNGINLP------ERVITITGEPEQNDKACAFIV 225
Query: 210 SRLHDNP 216
+++ ++P
Sbjct: 226 NKIVEDP 232
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 83/170 (48%), Gaps = 16/170 (9%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST----EGDDCLITVSSKEF 338
+ L+++ P G +IGKGG I Q+++E+GA IK+ S+ + ++ S++
Sbjct: 65 QLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIVVITGSEDS 124
Query: 339 FEDTLSATIEAVVRL-QPRCSEKIERDSGLI-SFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ +E + + QP E+++ + +++VP S G +IGKGG+ I +
Sbjct: 125 LKSVHKFLMEKISQAPQPPAKSPSEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIM 184
Query: 397 RLTKANIRILPKE----NLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
T + ++I K NLP + ++ I+G+ + A ++ ++
Sbjct: 185 EQTGSRVQISQKATNGINLP------ERVITITGEPEQNDKACAFIVNKI 228
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 90/213 (42%), Gaps = 57/213 (26%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDELVQISGE 197
Q+ K+L+PS G +IGKGGQ + ++ ETGA I++ K ++ P ++ +V I+G
Sbjct: 65 QLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGT---TERIVVITGS 121
Query: 198 ASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG 257
+K + ++ P P A +P
Sbjct: 122 EDSLKSVHKFLMEKISQAPQ----------------------PPAKSP------------ 147
Query: 258 GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAI 317
+ ++ +++ +++V P + G +IGKGGA I I +++G+ +
Sbjct: 148 ----------------SEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRV 191
Query: 318 KVDSSSTEGDDC---LITVSSKEFFEDTLSATI 347
++ +T G + +IT++ + D A I
Sbjct: 192 QISQKATNGINLPERVITITGEPEQNDKACAFI 224
>gi|114666310|ref|XP_511944.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Pan troglodytes]
gi|397477448|ref|XP_003810082.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pan paniscus]
Length = 577
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|56237027|ref|NP_006537.3| insulin-like growth factor 2 mRNA-binding protein 1 isoform 1 [Homo
sapiens]
gi|296202548|ref|XP_002748506.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Callithrix jacchus]
gi|297715965|ref|XP_002834307.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pongo abelii]
gi|332259442|ref|XP_003278798.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Nomascus leucogenys]
gi|354483617|ref|XP_003503989.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cricetulus griseus]
gi|402899533|ref|XP_003912749.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Papio anubis]
gi|296434536|sp|Q9NZI8.2|IF2B1_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1; AltName:
Full=Zip code-binding protein 1; Short=ZBP-1;
Short=Zipcode-binding protein 1
gi|4191608|gb|AAD09826.1| IGF-II mRNA-binding protein 1 [Homo sapiens]
gi|157170258|gb|AAI52771.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|162318726|gb|AAI56958.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|168275834|dbj|BAG10637.1| insulin-like growth factor 2 mRNA-binding protein 1 [synthetic
construct]
gi|189053788|dbj|BAG36040.1| unnamed protein product [Homo sapiens]
gi|355568496|gb|EHH24777.1| hypothetical protein EGK_08493 [Macaca mulatta]
Length = 577
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|72084060|ref|XP_790705.1| PREDICTED: uncharacterized protein LOC585801 isoform 2
[Strongylocentrotus purpuratus]
Length = 557
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 94/178 (52%), Gaps = 18/178 (10%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETN 100
+ + L P GSIIG+GG+ + QL+ DT + +++ + PG++ERV + + N
Sbjct: 78 MLKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGTQERVALLTGPVESLN 137
Query: 101 --AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A DK Q + + AE + E + QV K++VP+ G +IGKG
Sbjct: 138 NVAVFILDKIKESPQLGV-----KAGAETITSPERA---RQV--KIVVPNSTAGLIIGKG 187
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
G ++++I ++G++++I + S+ ++ ISGE+ +KA+ I +++ ++P
Sbjct: 188 GAMIKSIMEQSGSRVQISQKSD---GITLSERVITISGESDNNRKAMSFIVNKIQEDP 242
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 91/185 (49%), Gaps = 19/185 (10%)
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----T 324
+L S P + ++ L+++ P G +IGKGG I Q+++++G +K+ ++ T
Sbjct: 63 NLGSGPGGPIDDNKYMLKMLIPSTAAGSIIGKGGQTIAQLQRDTGTNVKLSKANDFYPGT 122
Query: 325 EGDDCLIT--VSSKE----FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPT 378
+ L+T V S F D + + + V+ ER + +++VP
Sbjct: 123 QERVALLTGPVESLNNVAVFILDKIKESPQLGVKAGAETITSPER-----ARQVKIVVPN 177
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
S G +IGKGG++I + + + ++I K + ++ + ++ ISG+ D + A+ +
Sbjct: 178 STAGLIIGKGGAMIKSIMEQSGSRVQISQKSDGITLS---ERVITISGESDNNRKAMSFI 234
Query: 439 MTRLR 443
+ +++
Sbjct: 235 VNKIQ 239
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 376 VPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDAL 435
VP + +G ++GKGG + E + LT A I+I K + + V I+G + A++A
Sbjct: 480 VPETLVGAILGKGGKTLVEFQNLTGAKIQISKKNEY--VPGTRNRRVTITGPVTAAQNAH 537
Query: 436 IQVMTRL 442
+M RL
Sbjct: 538 FLIMQRL 544
>gi|324516472|gb|ADY46541.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 360
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 22/172 (12%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ G+ +K +R + +KI I + GS ER+VT+ D N
Sbjct: 32 KEVGSIIGKRGDHIKSIRDGSGAKINISD---GSCPERIVTITGNVDTINK--------- 79
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
F + E+++ +S +T +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 80 -----AFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATG 134
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
A I++ E LPS R+ V ISG A + + I L + P + L
Sbjct: 135 ASIQV-ASEMLPSSTERA---VTISGSADAIVLCMQHICHILLEAPPKGTTL 182
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 84/181 (46%), Gaps = 17/181 (9%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G I IR SGA I + S + ++T++ DT+
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDGSCP--ERIVTITGNV---DTI 77
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ + + + T RL+VP ++ G LIGKGGS I E+R T A+I
Sbjct: 78 NKAFSMICNKFQEDMQALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASI 137
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLPYI 463
++ E LP S + V ISG + DA++ M + L + +T LPY
Sbjct: 138 QVA-SEMLP---SSTERAVTISG----SADAIVLCMQHICHILLEAPPKGTT----LPYR 185
Query: 464 P 464
P
Sbjct: 186 P 186
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 77/190 (40%), Gaps = 67/190 (35%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G +++IR +GA+I I D P + +V I+G
Sbjct: 23 LTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINI-SDGSCP------ERIVTITGNVD 75
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I ++ ++ A+ NS
Sbjct: 76 TINKAFSMICNKFQED--------MQALPNS----------------------------- 98
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ ++RL+ P G +IGKGG+ I +IR+ +GA+I+V
Sbjct: 99 -------------------VPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQV 139
Query: 320 DS----SSTE 325
S SSTE
Sbjct: 140 ASEMLPSSTE 149
>gi|148222190|ref|NP_001086143.1| neuro-oncological ventral antigen 1 [Xenopus laevis]
gi|49258011|gb|AAH74252.1| MGC84002 protein [Xenopus laevis]
Length = 484
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 35 EAGSTKRTNTGEDGQFFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 87 KSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 146
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ + ++GA +++ P + +V +
Sbjct: 147 I--KQV--KIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL---SQKPDGINLQERVVTV 199
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 200 SGEPEQNRKAVELIVQKIQEDP 221
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
+F L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 49 QFFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I +R P+ K E S L TT +++VP S G +IGKG
Sbjct: 109 L--NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKG 166
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + + A+ ++ +++
Sbjct: 167 GATVKAVMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVELIVQKIQ 218
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 371 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 430
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 431 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRV 469
>gi|281366597|ref|NP_001163493.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|386771584|ref|NP_001246873.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
gi|134085557|gb|ABO52837.1| IP17311p [Drosophila melanogaster]
gi|272455272|gb|ACZ94764.1| mushroom-body expressed, isoform E [Drosophila melanogaster]
gi|383292063|gb|AFH04544.1| mushroom-body expressed, isoform F [Drosophila melanogaster]
Length = 557
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 26/175 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFED 104
R + +++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV------------ 71
Query: 105 GDKFVSPAQDALFKVHDRVIAE-ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
S +A+F + + E D G Q+ +L+VP+ Q G +IGK G ++
Sbjct: 72 -----SGTTNAIFSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIK 126
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
IR TG I++ E LP+ R+ V +SG A + + + QI + ++P R
Sbjct: 127 EIRQTTGCSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPR 177
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S + ++TVS
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSC--PERIVTVSG----- 73
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
T +A A + + E D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 74 -TTNAIFSAFTLITKKFEEF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 130
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 131 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 167
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 290 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVAL 347
Query: 434 A--LIQVMTRL-RANLFDR 449
A LI + L +ANL ++
Sbjct: 348 AQYLINMSVELQKANLLEQ 366
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI E
Sbjct: 273 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGG-- 330
Query: 187 RSDELVQISGEASVVKKALCQ 207
+D + ISG V AL Q
Sbjct: 331 NTDRTITISGNPDSV--ALAQ 349
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 98 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 157
Query: 97 DE 98
++
Sbjct: 158 EQ 159
>gi|73966275|ref|XP_548184.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Canis lupus familiaris]
gi|301762950|ref|XP_002916873.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Ailuropoda melanoleuca]
gi|410980809|ref|XP_003996768.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Felis catus]
gi|281344391|gb|EFB19975.1| hypothetical protein PANDA_005026 [Ailuropoda melanoleuca]
Length = 577
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|225429462|ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 91/172 (52%), Gaps = 18/172 (10%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDGD 106
P ++G IIG+GGE +K L++ + +KI++ + P S R+V + D+ +
Sbjct: 143 PNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQ---IAKAE 199
Query: 107 KFVSPAQDALFKVH---DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
+ ++ D L + +++ L G S+ Q K VP++++G +IGKGG+ ++
Sbjct: 200 QLIN---DVLSEAEAGGSGIVSRRLTGQAGSE---QFVMK--VPNNKVGLIIGKGGETIK 251
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
N+++ TGA+I+++ HLP + VQI G + ++ A + + +N
Sbjct: 252 NMQARTGARIQVIP-LHLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISEN 302
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 84/173 (48%), Gaps = 20/173 (11%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-------DSSSTEGDDCLIT----V 333
S ++ P +G +IGKGG I ++ +SGA I+V +S T + + T
Sbjct: 137 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIA 196
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+++ D LS EA S ++ +G F + VP +++G +IGKGG I
Sbjct: 197 KAEQLINDVLS---EAEAGGSGIVSRRLTGQAGSEQFV--MKVPNNKVGLIIGKGGETIK 251
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISG---DLDLAKDALIQVMTRLR 443
M+ T A I+++P +LP + + VQI G ++ AK + +V++ R
Sbjct: 252 NMQARTGARIQVIPL-HLPPGDTSMERTVQIDGTSEQIESAKQLVNEVISENR 303
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 83/185 (44%), Gaps = 55/185 (29%)
Query: 137 GHQVTAKLL-VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQI 194
G+Q T+K + +P+ ++G +IGKGG+ ++ ++ ++GA+I++ +D + P+ R LV++
Sbjct: 132 GYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTR---LVEL 188
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
G + KA + L+ +S + + +V
Sbjct: 189 MGTPDQIAKA---------------EQLINDVLSEAEAGGSGIV---------------- 217
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
SR L S++F +++ P +G +IGKGG I ++ +G
Sbjct: 218 -------------SRRL----TGQAGSEQFVMKV--PNNKVGLIIGKGGETIKNMQARTG 258
Query: 315 AAIKV 319
A I+V
Sbjct: 259 ARIQV 263
>gi|344285913|ref|XP_003414704.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Loxodonta africana]
Length = 577
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|300794399|ref|NP_001179383.1| insulin-like growth factor 2 mRNA-binding protein 1 [Bos taurus]
gi|296476533|tpg|DAA18648.1| TPA: insulin-like growth factor 2 mRNA binding protein 1-like [Bos
taurus]
Length = 577
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|440910511|gb|ELR60305.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Bos grunniens
mutus]
Length = 577
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREA--- 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|119615102|gb|EAW94696.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_b
[Homo sapiens]
Length = 463
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 81 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 140
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 141 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 183
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 184 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREA--- 236
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 237 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 292
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 293 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 341
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 342 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 397
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 398 ELQNLTAAEV-VVPRDQTP---DENDQVI 422
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 285 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 344
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 345 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 381
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 382 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 413
>gi|431890756|gb|ELK01635.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Pteropus
alecto]
Length = 577
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVAGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 20/174 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFED 104
R + +++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV S TNA
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV---SGTTNAIFS 80
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ + + D G Q+ +L+VP+ Q G +IGK G ++
Sbjct: 81 AFTLITKKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKE 131
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
IR TG I++ E LP+ R+ V +SG A + + + QI + ++P R
Sbjct: 132 IRQTTGCSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAK 432
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 305 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSVA 362
Query: 433 DA--LIQVMTRL-RANLFDR 449
A LI + L +ANL ++
Sbjct: 363 LAQYLINMSVELQKANLLEQ 382
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 97 DE 98
++
Sbjct: 162 EQ 163
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 132/297 (44%), Gaps = 53/297 (17%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV S T+A ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV---SGTTSAIFAAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQNTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-------- 222
I++ E LP+ R+ V +SG A + + + QI + ++P R +
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQV 193
Query: 223 ---LASAISNSHSSSGSLVGPT-------AATPIVGIAPLMGP--YGGYK----GDTAGD 266
+ A + + G+ PT A+ M P GG AG
Sbjct: 194 TGPVILANGQAFTIQGNYAVPTQEVSKNPLASLAALGLAGMTPASTGGINHTALAALAGS 253
Query: 267 WSRSLYSAPRDDLSSKEFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDS 321
R+ +A R E + V+N IG +IGKGG I +IRQ SGA I++ +
Sbjct: 254 QLRT-ANANRAQQQQHEMT------VSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 303
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 17/163 (10%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S + ++TVS
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSC--PERIVTVSG----- 73
Query: 341 DTLSATIEAVVRLQPRCSEKIER--DSGLISFT---TRLLVPTSRIGCLIGKGGSIITEM 395
T SA A + + E + D G + T RL+VP S+ G LIGK GS I E+
Sbjct: 74 -TTSAIFAAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEI 132
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
R+ T +I++ E LP + + V +SG + + Q+
Sbjct: 133 RQNTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPD--SV 325
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 326 ALAQYLINMRISM 338
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG S
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTS 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFAAFTLITKKFEE 91
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R +T I++ E +P S ER VT+ ++
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQNTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 97 DE 98
++
Sbjct: 162 EQ 163
>gi|431921619|gb|ELK18971.1| Poly(rC)-binding protein 2 [Pteropus alecto]
Length = 446
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 131/314 (41%), Gaps = 59/314 (18%)
Query: 59 GRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFK 118
G+ GE VK++R ++ ++I I E ER++T+ ++ A+FK
Sbjct: 22 GKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-----------------AIFK 62
Query: 119 VHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
+I ++L D S + VT +L+VP+ Q G +IGKGG ++ IR TGA
Sbjct: 63 AFAMII-DKLEEDISSSMTNSTAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 121
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR---------LHDNPSRSQHL 222
Q+++ D LP+ R+ + I K +C + PS S +
Sbjct: 122 QVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVI 180
Query: 223 LA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
A + S H++ + P P + + G Y + D ++
Sbjct: 181 FAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQ 240
Query: 273 SA--PRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
+ P D S++ S L P IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 241 QSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIA 300
Query: 321 SSSTEGDDCLITVS 334
+ D +T++
Sbjct: 301 NPVEGSTDRQVTIT 314
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 22/116 (18%)
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
GK G + ++R+ESGA I + +EG+ C + TL+ A+ + +
Sbjct: 22 GKKGESVKKMREESGARINI----SEGN-CPERI-------ITLAGPTNAIFKAFAMIID 69
Query: 360 KIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
K+E D S + + T RL+VP S+ G LIGKGG I E+R T A +++
Sbjct: 70 KLEEDISSSMTNSTAASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV 125
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 258 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVE-----GSTDRQVT 312
Query: 194 ISGEASVVKKALCQIASRLHDNPSRSQ 220
I+G A+ + A I L + SQ
Sbjct: 313 ITGSAASISLAQYLINVSLENAKPSSQ 339
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTV 92
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER +T+
Sbjct: 92 LRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITI 140
>gi|119615099|gb|EAW94693.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615100|gb|EAW94694.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615101|gb|EAW94695.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
Length = 441
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 59 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 118
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 119 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 161
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 162 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREA--- 214
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 215 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 270
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 271 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 319
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 320 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 375
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 376 ELQNLTAAEV-VVPRDQTP---DENDQVI 400
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 263 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 322
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 323 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 359
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 360 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 391
>gi|350409768|ref|XP_003488838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
impatiens]
Length = 439
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 91/194 (46%), Gaps = 35/194 (18%)
Query: 23 PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV 82
P+KR GDD R L P + GSIIG+GG+ + +LR K+ I + +
Sbjct: 66 PHKRYRQGDDE-----------LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPD-C 113
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
PG E RV+T+ S + +V + V+ L + G ++
Sbjct: 114 PGPE-RVLTISSD-----------------LPTVLQVLNEVVPN-LEENGSRHGSDEIDV 154
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++LV Q GC+IGKGG ++ +R +TGA+I+I C +D L+ I G+ +
Sbjct: 155 RMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYSH----CCPHSTDRLISICGKPNTCI 210
Query: 203 KALCQIASRLHDNP 216
+ + ++ + + +P
Sbjct: 211 ECIRELIATIKTSP 224
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
++P + LRL+ P G +IGKGG I ++R + A+I V G + ++T
Sbjct: 64 TSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIV--PDCPGPERVLT 121
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+SS L ++ + + P E R G R+LV S+ GC+IGKGG I
Sbjct: 122 ISSD------LPTVLQVLNEVVPNLEENGSR-HGSDEIDVRMLVHQSQAGCIIGKGGLKI 174
Query: 393 TEMRRLTKANIRI 405
E+R T A I+I
Sbjct: 175 KELREKTGARIKI 187
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+ T ++ +P D G +IGKGG ++ +RS++GA I I DE L +D ++ I+G
Sbjct: 364 KTTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI--DEPLSG---SNDRIITITGLP 418
Query: 199 SVVKKALCQIASRLHDN 215
S ++ A + +H+N
Sbjct: 419 SQIQMAQYLLQQSVHEN 435
>gi|395826635|ref|XP_003786522.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Otolemur garnettii]
Length = 577
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 33/153 (21%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG--ETVPGSEERVVTV- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I ET P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPET-PDSKVRMVIIT 457
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + F P ++ + H R V
Sbjct: 458 GPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------V 494
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
P+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 495 PASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
>gi|426347646|ref|XP_004041460.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Gorilla gorilla gorilla]
Length = 525
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 143 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 202
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 203 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 245
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 246 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREA--- 298
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 299 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 354
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 355 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 403
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 404 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 459
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 460 ELQNLTAAEV-VVPRDQTP---DENDQVI 484
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 347 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 406
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 407 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 443
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 444 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 475
>gi|47226335|emb|CAG09303.1| unnamed protein product [Tetraodon nigroviridis]
Length = 760
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/329 (23%), Positives = 149/329 (45%), Gaps = 38/329 (11%)
Query: 122 RVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI--LKD 178
R+I E ++ + ++ + K++ ++ IG +IGK G+ ++ I ETG +I I L+D
Sbjct: 321 RMIMEIVQKEANETKAMEDIPLKIIASNNYIGRLIGKQGRNLKKIEEETGTKITISSLQD 380
Query: 179 EHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSRSQHLLASAISNSH---- 231
++ ++ + + G A +I +L ++N + + S I +
Sbjct: 381 LNI----YNNERTITVKGSLEACCNAEVEIMKKLREAYENDVAAINQQTSLIPGLNLNAL 436
Query: 232 --SSSGSLVGPTAATPIVGIAPL----MGPYGGYKGDTAGDWSRSLYSA-PRDDLSSKEF 284
SS V P+AA P + P+ P+ G+ + + SA P + ++
Sbjct: 437 GIFSSALPVLPSAAGPRSTMPPVGPAGYNPFIGHSSHPSSLYGVPPASAIPHQHAAQEQE 496
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLS 344
L P +G +IGK G I Q+ +GA+IK+ + + + ++
Sbjct: 497 VAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVI---------IT 547
Query: 345 ATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
T EA + Q R K++ ++ + T + VP++ G +IGKGG + E++ LT
Sbjct: 548 GTPEAQFKAQGRIFGKLKEENIFTGKEEVRLETHIRVPSTAAGRVIGKGGKTVNELQSLT 607
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDL 428
A + I+P++ P +++ +V+I G
Sbjct: 608 SAEV-IVPRDQTPD--EKNEVVVKICGHF 633
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 82/178 (46%), Gaps = 26/178 (14%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTVYSASDET 99
E V P + +G++IG+ G+ +KQL + I+I P + ER+V +
Sbjct: 494 EQEVAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVIITGTP--- 550
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV--TAKLLVPSDQIGCVIGK 157
+A FK R+ +L+ + G +V + VPS G VIGK
Sbjct: 551 --------------EAQFKAQGRIFG-KLKEENIFTGKEEVRLETHIRVPSTAAGRVIGK 595
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGE--ASVVKKALCQIASRLH 213
GG+ V ++S T A++ + +D+ + +++ +V+I G AS V+K + R H
Sbjct: 596 GGKTVNELQSLTSAEVIVPRDQ---TPDEKNEVVVKICGHFFASQVRKKKKNPSLRPH 650
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 134/313 (42%), Gaps = 56/313 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ K L +S RI + ER+VT+ +D
Sbjct: 17 RLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEGNCPERIVTITGPTD-------- 68
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGD-------EDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A+FK +IA + D + VT +L+VP+ Q G +IGKG
Sbjct: 69 ---------AIFKAFA-MIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKG 118
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 119 GSKIKEIRESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPK 174
Query: 219 ------------SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGD 266
+ + A + + ++ P T + +A P+ G T
Sbjct: 175 GATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFTPL-GQTTPA 233
Query: 267 W---SRSLYSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
+ L+S+ D S + L P IG +IG+ G IN+IRQ S
Sbjct: 234 FPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMS 293
Query: 314 GAAIKVDSSSTEG 326
GA IK+ +++TEG
Sbjct: 294 GAQIKI-ANATEG 305
Score = 42.7 bits (99), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 12/94 (12%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T RL+VP S+ G LIGKGGS I E+R T A +++ + LP + + V ISG
Sbjct: 101 TLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISG---- 152
Query: 431 AKDALIQVMTRLRANLFDREGAVSTFVPVLPYIP 464
DA+IQ + ++ + + +T +PY P
Sbjct: 153 TPDAIIQCVKQICVVMLESPPKGAT----IPYRP 182
>gi|255580721|ref|XP_002531182.1| conserved hypothetical protein [Ricinus communis]
gi|223529223|gb|EEF31197.1| conserved hypothetical protein [Ricinus communis]
Length = 122
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 54/84 (64%), Gaps = 7/84 (8%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P D VYR + P+ K+GSIIGR GE++K++ ++T+++IRI + P +R+V +
Sbjct: 24 PRDNVYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLI------- 76
Query: 100 NAFEDGDKFVSPAQDALFKVHDRV 123
+ E+ + +SPA DA+ +V RV
Sbjct: 77 SGKEEPEAALSPAMDAVLRVFKRV 100
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
T G W PRD++ RL+ PVA +G +IG+ G +I ++ E+ A I++
Sbjct: 15 QTEGKWP----GWPRDNVY------RLIVPVAKVGSIIGRKGELIKKMCVETRARIRILD 64
Query: 322 SSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCS 358
D ++ +S KE E LS ++AV+R+ R S
Sbjct: 65 GPPSISDRIVLISGKEEPEAALSPAMDAVLRVFKRVS 101
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 11/76 (14%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD----- 427
RL+VP +++G +IG+ G +I +M T+A IRIL + P I+ D +V ISG
Sbjct: 30 RLIVPVAKVGSIIGRKGELIKKMCVETRARIRIL--DGPPSIS---DRIVLISGKEEPEA 84
Query: 428 -LDLAKDALIQVMTRL 442
L A DA+++V R+
Sbjct: 85 ALSPAMDAVLRVFKRV 100
>gi|17737727|ref|NP_524208.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
gi|1770212|emb|CAA67719.1| nucleic acid binding protein [Drosophila melanogaster]
gi|7296507|gb|AAF51792.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
Length = 386
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 20/168 (11%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ GEIV + R ++ +KI I + + P ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDGSCP---ERIVTV---SGTTNAIFSAFTLIT 86
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 87 KKFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTG 137
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
I++ E LP+ R+ V +SG A + + + QI + ++P R
Sbjct: 138 CSIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI +C
Sbjct: 277 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI------SNCEE 330
Query: 187 R----SDELVQISGEASVVKKALCQIASRL 212
R +D + ISG V A I R+
Sbjct: 331 REGGNTDRTITISGNPDSVALAQYLINMRI 360
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 294 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPDSV-- 349
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 350 ALAQYLINMRISM 362
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 7/75 (9%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +L++ ++G +IGK G+IV R E+GA+I I D P + +V +SG +
Sbjct: 24 LTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI-SDGSCP------ERIVTVSGTTN 76
Query: 200 VVKKALCQIASRLHD 214
+ A I + +
Sbjct: 77 AIFSAFTLITKKFEE 91
>gi|359486525|ref|XP_002264331.2| PREDICTED: RNA-binding protein Nova-1-like [Vitis vinifera]
Length = 309
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 125/283 (44%), Gaps = 54/283 (19%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + ++I++ E PG+ +R++ + A++E
Sbjct: 34 TYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATNE- 92
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAE---ELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+ K + ++A+ E+ ++ + + +L+VP+ G +IG
Sbjct: 93 ----------------IIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGIIG 136
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG +++ ++ A I+I ++ + +D LV + G +A+ I S+L ++P
Sbjct: 137 KGGSTIKSFIEDSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQMRAIDLILSKLTEDP 194
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
+Q + A S + + + GP A GG + D S S+
Sbjct: 195 HYTQFMNA-PFSYAAAYNSMNYGPNGA-------------GGKFQNNKEDRSNSVTIGVA 240
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D+ +IG V+G+GG I I Q SGA IK+
Sbjct: 241 DE---------------HIGLVVGRGGRNIMDISQASGARIKI 268
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+P D K +R + A G VIGKGG+ IN + +SGA I++
Sbjct: 24 SPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLS------------- 70
Query: 334 SSKEFFEDT------LSATIEAVVRLQPRCSEKI-------ERDSGLISFTTRLLVPTSR 380
+ EFF T +S +++ K+ + D RL+VP S
Sbjct: 71 RNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSS 130
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
G +IGKGGS I ++A+I+I P++N D +V + G L+ A+ +++
Sbjct: 131 CGGIIGKGGSTIKSFIEDSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQMRAIDLILS 188
Query: 441 RL 442
+L
Sbjct: 189 KL 190
>gi|291575150|ref|NP_065151.2| poly(rC)-binding protein 4 isoform a [Homo sapiens]
gi|114587204|ref|XP_001170813.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan troglodytes]
gi|16877720|gb|AAH17098.1| PCBP4 protein [Homo sapiens]
gi|119585570|gb|EAW65166.1| poly(rC) binding protein 4, isoform CRA_b [Homo sapiens]
Length = 360
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 77/289 (26%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
GG ++S +LRLV P + G +IGK G I +IR
Sbjct: 94 ------GG-------------------NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QES--GAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPRCSEKIE--- 362
+ GA I S + G + +S+ + F + T V +LQ S +
Sbjct: 129 ESPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFAT 185
Query: 363 ------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 186 PSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 125/293 (42%), Gaps = 66/293 (22%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSET--GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
IR GA I L + L +++ + G+ V A ++ Q
Sbjct: 126 EIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEV----------TKLQQ 175
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
L + A+ ATP + P + P SS
Sbjct: 176 LSSHAVP-------------FATP--SVVPGLD--------------------PGTQTSS 200
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 201 QEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 249
>gi|255583738|ref|XP_002532622.1| Far upstream element-binding protein, putative [Ricinus communis]
gi|223527642|gb|EEF29753.1| Far upstream element-binding protein, putative [Ricinus communis]
Length = 314
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 125/284 (44%), Gaps = 56/284 (19%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + ++I++ E PG+ +R++
Sbjct: 36 TYVRFLVSNAAAGSVIGKGGATITDFQSQSGARIQLSRNYEFFPGTSDRII--------- 86
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAE---ELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+S D + K + V+A+ EL ++ D + +L+VP+ G +IG
Sbjct: 87 --------LISGILDDVLKGVELVLAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIG 138
Query: 157 KGGQIVQNIRSETGAQIRIL-KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
KGG I+++ E+ A I+I +D + +D LV ++G +A+ I S+L+D+
Sbjct: 139 KGGSIIKSFIEESQAGIKISPQDNNFYGL---NDRLVTVTGTLEEQMRAIDLILSKLYDD 195
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
P Q + A S + + + G A GG + D + S+
Sbjct: 196 PHYVQTMHA-PFSYAVAYNSMNYGANGA-------------GGKFQNNKEDRTNSVTIGV 241
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D A+IG V+G+GG I +I Q SGA IK+
Sbjct: 242 AD---------------AHIGLVVGRGGRNIMEISQVSGARIKI 270
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 83/163 (50%), Gaps = 14/163 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE----GDDCLITVSSKEFFED 341
+R + A G VIGKGGA I + +SGA I++ S + E D +I +S +D
Sbjct: 38 VRFLVSNAAAGSVIGKGGATITDFQSQSGARIQL-SRNYEFFPGTSDRIILISG--ILDD 94
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTT--RLLVPTSRIGCLIGKGGSIITEMRRLT 399
L +E V L SE D + T RL+VP S G +IGKGGSII +
Sbjct: 95 VLKG-VELV--LAKLLSELHTEDGDDVDPRTKVRLVVPNSSCGSIIGKGGSIIKSFIEES 151
Query: 400 KANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+A I+I P++N +D +V ++G L+ A+ ++++L
Sbjct: 152 QAGIKISPQDN--NFYGLNDRLVTVTGTLEEQMRAIDLILSKL 192
>gi|359482434|ref|XP_002270860.2| PREDICTED: tyrosine-sulfated glycopeptide receptor 1-like [Vitis
vinifera]
Length = 1280
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
K L QIASRLHDNPSRSQHL + +SSSGSL+G T+ PI+G+APL+
Sbjct: 144 KILYQIASRLHDNPSRSQHLFVYVVPIGYSSSGSLMGLTSGAPIMGLAPLIN 195
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 8/80 (10%)
Query: 51 IRKIGSII-GRGGEIVKQLRIDTKSKIR------IGETVPGSEERVVTVYSASDETNAFE 103
+R+I SII G +I K +ID +I I PG EE V+T+Y+++DETNAF+
Sbjct: 75 LRRIDSIIDGFKADISKAPKIDPTKEIASFTARVIIMDYPGWEEHVITIYNSNDETNAFD 134
Query: 104 DGDKFVSPAQDALFKVHDRV 123
D D FVSPA+ L+++ R+
Sbjct: 135 DSDTFVSPAK-ILYQIASRL 153
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 93/182 (51%), Gaps = 36/182 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GEIVK+ R ++ ++I I + ER+VT+ +D
Sbjct: 21 RLLMAGKEVGSIIGKKGEIVKRFREESGARINISDG--SCPERIVTITGTTD-------- 70
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH---------QVTAKLLVPSDQIGCVIG 156
A+FK + +I ++L E+ GG +T +L++P+ Q G +IG
Sbjct: 71 ---------AIFKAFN-LICKKL---EEEVGGPLAGTAIPRPPITLRLIMPASQCGSLIG 117
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ IR TGA + ++ E LP+ R+ V +SG + + + + I + ++P
Sbjct: 118 KGGSKIKEIREITGASV-VVASEMLPNSTERA---VTVSGTSDAITQCIYHICCVMLESP 173
Query: 217 SR 218
+
Sbjct: 174 PK 175
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 92/194 (47%), Gaps = 19/194 (9%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
D S ++RL+ +G +IGK G I+ + R+ESGA I + S IT ++
Sbjct: 12 DAPSVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISDGSCPERIVTITGTTDA 71
Query: 338 FFE--DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEM 395
F+ + + +E V P I R T RL++P S+ G LIGKGGS I E+
Sbjct: 72 IFKAFNLICKKLEEEVG-GPLAGTAIPRPP----ITLRLIMPASQCGSLIGKGGSKIKEI 126
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVST 455
R +T A++ ++ E LP + + V +SG DA+ Q + + + + +T
Sbjct: 127 REITGASV-VVASEMLP---NSTERAVTVSGT----SDAITQCIYHICCVMLESPPKGAT 178
Query: 456 FVPVLPYIPVSENG 469
+PY P + G
Sbjct: 179 ----IPYRPKPQVG 188
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 61/182 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+IV+ R E+GA+I I D P + +V I+G
Sbjct: 18 LTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINI-SDGSCP------ERIVTITGTTD 70
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L + + GP A T I
Sbjct: 71 AIFKAFNLICKKLEEE---------------------VGGPLAGTAI------------- 96
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
PR + +LRL+ P + G +IGKGG+ I +IR+ +GA++ V
Sbjct: 97 ---------------PRPPI-----TLRLIMPASQCGSLIGKGGSKIKEIREITGASVVV 136
Query: 320 DS 321
S
Sbjct: 137 AS 138
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
G Q + ++ VP++ IGC+IGKGG + IR +GA IRI E S S+ + I
Sbjct: 264 SGAPQQSQEMAVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEDRES---SSERTITI 320
Query: 195 SGEASVVKKALCQIASRL 212
+G A V A I +RL
Sbjct: 321 TGTAESVALAQYLINTRL 338
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 364 DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
SG + + VP IGC+IGKGG+ I E+R+++ A IRI N S + +
Sbjct: 263 QSGAPQQSQEMAVPNELIGCIIGKGGTKIAEIRQISGAMIRI---SNCEDRESSSERTIT 319
Query: 424 ISGDLDLAKDALIQVMTRL 442
I+G + A + TRL
Sbjct: 320 ITGTAESVALAQYLINTRL 338
>gi|242020720|ref|XP_002430800.1| predicted protein [Pediculus humanus corporis]
gi|212515997|gb|EEB18062.1| predicted protein [Pediculus humanus corporis]
Length = 515
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 173/392 (44%), Gaps = 52/392 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE-T 99
D R L +G+IIGR G ++Q+ T++++ + + GS E+ +T+Y D T
Sbjct: 113 DFPLRILVQSDMVGAIIGRQGTTIRQITQQTRARVDVHRKDNVGSLEKAITIYGNPDNCT 172
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
NA + I E ++ + + +++ K+L ++ IG +IGKGG
Sbjct: 173 NACKK-------------------ILEVMQAEASNTNKGEISLKILAHNNLIGRIIGKGG 213
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
++ I +T ++I + + S L + ++ + G + +A +I+++L +
Sbjct: 214 NTIKRIMQDTDSKITVSSINDINSFNL--ERIITVKGTIDNMSRAESEISAKLRQS---Y 268
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL------YS 273
++ L + + G +T +G + G +GG G A +
Sbjct: 269 ENDLQAMAPQTMMFPGLHPMAMMSTNNMGYSSRPGAFGGVYGSGAPIPYSPIYPPAGPQQ 328
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
P S+E + L P + +G +IG G I I + SGA++K+ +S E +
Sbjct: 329 GPSQGGDSQETTF-LFIPNSAVGAIIGTKGTHIRNIIRFSGASVKI--ASLEQEKGTEPP 385
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLI-------SFTTRLLVPTSRIGCLIG 386
+ ++ T+ T E+ + Q EK+ R+ G I T +LV G +IG
Sbjct: 386 AERKV---TIVGTPESQWKAQYLIFEKM-REEGFIGSGNDDVKLTVEILV-----GRIIG 436
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASED 418
KGG + E++ T + I+ LP++ A E+
Sbjct: 437 KGGQNVRELQHATGSIIK-LPEQGAAPPAQEE 467
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 91/198 (45%), Gaps = 11/198 (5%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVSSKEFFED 341
+F LR++ +G +IG+ G I QI Q++ A + V G + IT+ D
Sbjct: 113 DFPLRILVQSDMVGAIIGRQGTTIRQITQQTRARVDVHRKDNVGSLEKAITIYGN---PD 169
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
+ + + L+ +E + G IS ++L + IG +IGKGG+ I + + T +
Sbjct: 170 NCTNACKKI--LEVMQAEASNTNKGEISL--KILAHNNLIGRIIGKGGNTIKRIMQDTDS 225
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
I + ++ E ++ + G +D A ++ +LR + + A++ + P
Sbjct: 226 KITVSSINDINSFNLE--RIITVKGTIDNMSRAESEISAKLRQSYENDLQAMAPQTMMFP 283
Query: 462 YI-PVSENGSDGLNYESR 478
+ P++ ++ + Y SR
Sbjct: 284 GLHPMAMMSTNNMGYSSR 301
>gi|426340777|ref|XP_004034304.1| PREDICTED: poly(rC)-binding protein 4 isoform 4 [Gorilla gorilla
gorilla]
Length = 360
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 124/289 (42%), Gaps = 77/289 (26%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
GG ++S +LRLV P + G +IGK G I +IR
Sbjct: 94 ------GG-------------------NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QES--GAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPRCSEKIE--- 362
+ GA I S + G + +S+ + F + T V +LQ S +
Sbjct: 129 ESPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPTEVTKLQQLSSHAVPFAT 185
Query: 363 ------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 186 PSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 124/293 (42%), Gaps = 66/293 (22%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSET--GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
IR GA I L + L +++ + G+ V ++ Q
Sbjct: 126 EIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPTEV----------TKLQQ 175
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
L + A+ ATP + P + P SS
Sbjct: 176 LSSHAVP-------------FATP--SVVPGLD--------------------PGTQTSS 200
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 201 QEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 249
>gi|335299140|ref|XP_003358506.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Sus scrofa]
Length = 360
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 121/286 (42%), Gaps = 71/286 (24%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
GG ++S +LRLV P + G +IGK G I +IR
Sbjct: 94 ------GG-------------------NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QES--GAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ-------PRCSEKI 361
+ GA I S + G L T + T V +LQ P S +
Sbjct: 129 ESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSM 188
Query: 362 ER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 189 VPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 124/293 (42%), Gaps = 66/293 (22%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSET--GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
IR GA I L + L +++ + G+ V A ++ Q
Sbjct: 126 EIRESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEV----------TKLQQ 175
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
L A+ + +P M P G P SS
Sbjct: 176 LSGHAVPFA-------------------SPSMVP--GLD--------------PGTQTSS 200
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 201 QEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 249
>gi|156102214|ref|XP_001616800.1| RNA-binding protein Nova-1 [Plasmodium vivax Sal-1]
gi|148805674|gb|EDL47073.1| RNA-binding protein Nova-1, putative [Plasmodium vivax]
Length = 335
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/293 (22%), Positives = 135/293 (46%), Gaps = 46/293 (15%)
Query: 48 LCPIRKI------GSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDE 98
LC ++ + GS+IG+ G I+ + T +++ T P ++ERV+ + ++
Sbjct: 17 LCFVKMLVNNLVAGSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGKQEQ 76
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRV---IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
N +AL + D++ + + ++ + + T +++VP + +I
Sbjct: 77 IN-------------NALLIILDKIRQITTQNFQDKQNMNTSPKYTCRIVVPKSAVSAII 123
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGGQ ++ ++ TGA+I+I E L ++ ++ I G + ++ + + ++
Sbjct: 124 GKGGQQIKQLQDTTGAKIQISSRED----GL-NERIISIIGPFESISDTAIKVTNSIQND 178
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATP-IVGIAPLMG-----PYGGYKGDTAGDWS- 268
P+ L ++ +S ++ G ++ + V PL G YG ++ + D +
Sbjct: 179 PN-----LKDLLNVIYSKDANMNGRSSLSQNFVNQVPLNGYVVPQQYGVFQHEQYMDVNM 233
Query: 269 -RSLYSAPRDDLSSK-EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
SL RD + E S+++ P IG VIGK GA + I +GA I++
Sbjct: 234 MNSLMRHSRDLFNLPCEISIQI--PDEFIGSVIGKNGARLTNIMNSTGAQIRI 284
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 97/229 (42%), Gaps = 53/229 (23%)
Query: 32 DRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVT 91
D+ P+ T R + P + +IIG+GG+ +KQL+ T +KI+I G ER+++
Sbjct: 98 DKQNMNTSPKYTC-RIVVPKSAVSAIIGKGGQQIKQLQDTTGAKIQISSREDGLNERIIS 156
Query: 92 VY----SASDE----TNAFEDG---------------------------------DKFVS 110
+ S SD TN+ ++ + +V
Sbjct: 157 IIGPFESISDTAIKVTNSIQNDPNLKDLLNVIYSKDANMNGRSSLSQNFVNQVPLNGYVV 216
Query: 111 PAQDALFKVHDR-----VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
P Q +F+ H++ ++ +R D + +P + IG VIGK G + NI
Sbjct: 217 PQQYGVFQ-HEQYMDVNMMNSLMRHSRDL-FNLPCEISIQIPDEFIGSVIGKNGARLTNI 274
Query: 166 RSETGAQIRI-LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+ TGAQIRI K E +P A D V+I G + V A + RL
Sbjct: 275 MNSTGAQIRISRKGELVPGTA---DRKVRIMGTVAAVHAAHVLLLQRLE 320
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 76/152 (50%), Gaps = 9/152 (5%)
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSST----EGDDCLITVSSKEFFEDTLSATIEAVV 351
G VIGK G+II I ++G ++K+ +++ + L+ +E + L ++ +
Sbjct: 30 GSVIGKNGSIITSIENKTGCSLKLSPTNSYFPNTQERVLVLCGKQEQINNALLIILDKIR 89
Query: 352 RLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENL 411
++ + + + + +T R++VP S + +IGKGG I +++ T A I+I +E+
Sbjct: 90 QITTQNFQDKQNMNTSPKYTCRIVVPKSAVSAIIGKGGQQIKQLQDTTGAKIQISSRED- 148
Query: 412 PKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
++ ++ I G + D I+V ++
Sbjct: 149 ----GLNERIISIIGPFESISDTAIKVTNSIQ 176
>gi|33150676|gb|AAP97216.1|AF092441_1 CBP [Homo sapiens]
Length = 397
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 139/304 (45%), Gaps = 45/304 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSFLERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IG+ G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGQAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLL 223
IR TGAQ+++ D P+ R+ V +SG + + QI + + ++P + +
Sbjct: 126 EIRETTGAQVQVAGD-LFPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATI- 180
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA--------- 274
+ S SL G + G + + G YG + A
Sbjct: 181 ------PYHPSLSL-GTVLLSANQGFS-VQGQYGAVTQREVTKLQQLSSHAVPFATPSVV 232
Query: 275 ----PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + +
Sbjct: 233 PGLDPGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERH 288
Query: 331 ITVS 334
+T++
Sbjct: 289 VTIT 292
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 128/298 (42%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + L +
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSFL-------ER 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 QAGTKIKEIRETTGAQVQVAGDLFPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPR 356
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTQREVTKLQQL 219
Query: 357 CSEKIE---------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
>gi|366993026|ref|XP_003676278.1| hypothetical protein NCAS_0D03360 [Naumovozyma castellii CBS 4309]
gi|342302144|emb|CCC69917.1| hypothetical protein NCAS_0D03360 [Naumovozyma castellii CBS 4309]
Length = 445
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 142/336 (42%), Gaps = 61/336 (18%)
Query: 40 PEDTVY-RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
PED V+ R LC +++ ++G GE + +++ DT ++I + E + G ER++ V A D
Sbjct: 71 PEDNVHLRMLCSVKEASLVVGPKGESISKIKKDTSTRINVSENIRGVPERIIYVRGACDN 130
Query: 99 T-NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
NA+ + K + + +F+ + + G + VT LL+ IG +IGK
Sbjct: 131 VANAYLNIAKAIRKNEGIIFQGPEEDEKDREEGSQSKSSDELVTIHLLISHHLIGYIIGK 190
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA---LCQIASRLHD 214
G ++ I + ++ D+ S +D ++ I+G ++KA + Q H+
Sbjct: 191 HGSRLKEIEQTSSCKLYASPDQLFSS----NDRILTITGFPDAIQKATRCIGQTILDCHE 246
Query: 215 NPSRSQHLL------ASAISNSHSSSG---------------------------SLVGPT 241
+ S+ + + SA+SNS S G ++ PT
Sbjct: 247 STSKKRAIFYQPSIGYSALSNSSSYYGYNNQSQRFYQFNKYNSYRSRRAPRSPPVMMIPT 306
Query: 242 AATPI-VGIAPLMGPYGGYKGDTAGDWS--------------RSLYSAPRDDLSSKEFSL 286
PI V L P Y +T + + ++ S ++ S+ S+
Sbjct: 307 PVQPIQVTNQTLKQPV--YTAETVANATSFTPNFVLPNVRIVNTIISQSGNNQDSQLMSV 364
Query: 287 RLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVD 320
+ + +G +IG+ G IN I++ +G +I +D
Sbjct: 365 QREIYINEEFVGNIIGREGRNINSIKETTGCSIFID 400
>gi|386771595|ref|NP_001246876.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
gi|383292067|gb|AFH04547.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
Length = 433
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GEIV + R ++ +KI I + ER+VTV S TNA ++
Sbjct: 33 KEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTV---SGTTNAIFSAFTLITK 87
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
+ + D G Q+ +L+VP+ Q G +IGK G ++ IR TG
Sbjct: 88 KFEEWCSQFN---------DVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGC 138
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
I++ E LP+ R+ V +SG A + + + QI + ++P R
Sbjct: 139 SIQV-ASEMLPNSTERA---VTLSGSAEQITQCIYQICLVMLESPPR 181
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 13/161 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S ++RL+ +G +IGK G I+N+ R+ESGA I + S ++ ++ F
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDGSCPERIVTVSGTTNAIF- 79
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + + CS+ D G + T RL+VP S+ G LIGK GS I E+R+
Sbjct: 80 ---SAFTLITKKFEEWCSQF--NDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQ 134
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
T +I++ E LP + + V +SG + + Q+
Sbjct: 135 TTGCSIQVA-SEMLP---NSTERAVTLSGSAEQITQCIYQI 171
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+LR ++ Q ++ V +D IGC+IGKGG + IR +GA IRI +C
Sbjct: 324 QLRTANPANRAQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRI------SNCEE 377
Query: 187 R----SDELVQISGEASVVKKALCQIASRL 212
R +D + ISG V A I R+
Sbjct: 378 REGGNTDRTITISGNPDSVALAQYLINMRI 407
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
+ V IGC+IGKGG+ I E+R+++ A IRI E + D + ISG+ D
Sbjct: 341 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEE--REGGNTDRTITISGNPD--SV 396
Query: 434 ALIQVMTRLRANL 446
AL Q + +R ++
Sbjct: 397 ALAQYLINMRISM 409
Score = 38.5 bits (88), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 38 IGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSAS 96
+G R + P + GS+IG+ G +K++R T I++ E +P S ER VT+ ++
Sbjct: 102 VGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQVASEMLPNSTERAVTLSGSA 161
Query: 97 DE 98
++
Sbjct: 162 EQ 163
>gi|307108077|gb|EFN56318.1| hypothetical protein CHLNCDRAFT_57590 [Chlorella variabilis]
Length = 688
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
V A+LLV S +G ++G+GG +++ + +GA +RIL LP+CA DE+V++ G
Sbjct: 197 VEARLLVDSSVVGFLVGRGGATIKDTMARSGAGVRILPKAELPACACLGDEVVRVVGSCE 256
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLM-GPYGG 258
AL +AS++ + R H + + G+L PLM G G
Sbjct: 257 AACAALRLLASQIKAHVLR--HGPPPPSPSYPGAPGAL------------PPLMLGQAGH 302
Query: 259 YKGDTA--------------GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGA 304
+ D A L P ++ E + RL+ P G +IGKGG
Sbjct: 303 HHPDVAFLHPSLAAAAFYPPPASPAGLPPPPAFSGAAVEVTFRLLAPTNRTGNIIGKGGE 362
Query: 305 IINQIRQESGAAIKV 319
+ ++R E+GA IKV
Sbjct: 363 HVRRVRTETGARIKV 377
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 48/79 (60%)
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL 428
S RLLV +S +G L+G+GG+ I + + A +RILPK LP A DE+V++ G
Sbjct: 196 SVEARLLVDSSVVGFLVGRGGATIKDTMARSGAGVRILPKAELPACACLGDEVVRVVGSC 255
Query: 429 DLAKDALIQVMTRLRANLF 447
+ A AL + ++++A++
Sbjct: 256 EAACAALRLLASQIKAHVL 274
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 34/47 (72%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEER 88
+ +R L P + G+IIG+GGE V+++R +T ++I++ + PGSEER
Sbjct: 341 EVTFRLLAPTNRTGNIIGKGGEHVRRVRTETGARIKVFDPAPGSEER 387
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 31/38 (81%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
+VT +LL P+++ G +IGKGG+ V+ +R+ETGA+I++
Sbjct: 341 EVTFRLLAPTNRTGNIIGKGGEHVRRVRTETGARIKVF 378
>gi|116192195|ref|XP_001221910.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181728|gb|EAQ89196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 375
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 132/292 (45%), Gaps = 36/292 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+GG+ V LR +T K + + V G +RV+T+ T E
Sbjct: 53 RAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVYDRVLTI------TGGCEAI 106
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + AL + + + G S+G H + KLL+ +Q+G +IG+ G +++I
Sbjct: 107 SRAYAVVARALLEGAPTI---GMGGVVQSNGTHPI--KLLISHNQMGTIIGRQGLKIKHI 161
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ +G ++ + + E LP R +V++ G +++A+ +I L D+ R +
Sbjct: 162 QDVSGVRM-VAQKEMLPQSTER---IVEVQGTPEGIQRAIWEICKCLVDDWQRGAGTVLY 217
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR--------- 276
+G+ G T T V PYGG + G+ + PR
Sbjct: 218 NPVVRTQGAGAAPGVTGTTNFV---QDRAPYGGSRVTRTGNGADFSNGGPRPYNRRSDSD 274
Query: 277 --------DDLSSKEFSLR-LVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D + +E + + P +G +IG+GG+ I++IR+ SGA I +
Sbjct: 275 AAARGPPTHDENGEEIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISI 326
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
D +G T + +P+D +GC+IG+GG + IR +GA+I I K H + + +
Sbjct: 284 DENGEEIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKAPHDET----GERMF 339
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
I G A ++AL + L R Q A
Sbjct: 340 TIMGSAKANERALFLLYENLEAEKMRRQQQAA 371
>gi|71997385|ref|NP_001023001.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
gi|373218579|emb|CCD61630.1| Protein ZK418.9, isoform b [Caenorhabditis elegans]
Length = 510
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 163/387 (42%), Gaps = 66/387 (17%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
Y P + +G +IG+GG S+IR+ + G V + N F +
Sbjct: 11 YPVPEKVVGLVIGKGG-----------SEIRLIQQTSGCR---VQMDPDHQSVNGFRNCT 56
Query: 107 KFVSPAQDALFK-VHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
P Q A+ + + +VI G + +VT ++L+P+D+IG VIGKGG+ ++ +
Sbjct: 57 IEGPPDQVAVARQMITQVINRNQTGAQPGAAPGEVTEEMLIPADKIGLVIGKGGETIRIV 116
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ ++G LR+ +VQ + A+ K L I S +++ L+ +
Sbjct: 117 QEQSG---------------LRNCNVVQETTTATGQPKPLRMIGSPAAIETAKA--LVHN 159
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFS 285
++N+ ++ P++ AP P G + G Y A +
Sbjct: 160 IMNNTQGNA----------PLLQRAPHQ-PSGQFGGG---------YGA-----QEAQAK 194
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLITVSSKEFFEDTL 343
++ P + G +IGKGG +I ++ E+G I K D++ D + + +++
Sbjct: 195 GEVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRAT 254
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTR----LLVPTSRIGCLIGKGGSIITEMRRLT 399
E V R +R S + + VP + G +IGKGG I ++ R T
Sbjct: 255 ERITEIVNRAIKNNGAPQDRGSAGTVLPGQSIFYMHVPAGKCGLVIGKGGENIKQIERET 314
Query: 400 KANIRILPKENLPKIASEDDEMVQISG 426
A + P + +ED+++ +I G
Sbjct: 315 GATCGLAPAA---EQKNEDEKVFEIKG 338
>gi|313239007|emb|CBY13992.1| unnamed protein product [Oikopleura dioica]
Length = 386
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 36/189 (19%)
Query: 40 PEDTVY-RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
P D ++ R+L P + G+IIGRGG ++ LR + ++ I I E + ERV+ + S E
Sbjct: 92 PSDKIWCRFLIPSKVAGAIIGRGGATIRALREEYQAIINIPEAR--APERVLKICVNSRE 149
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGH-------QVTAKLLVPSD 149
T +H V IAE L+ +E++ G H + ++LV S
Sbjct: 150 T-------------------LHTIVSQIAEILK-NENAKGSHNGRRKEGETELRILVQSS 189
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA 209
Q G +IG G V+N+R TG++I I + C S+ + I G + V K + I
Sbjct: 190 QAGAIIGTKGSTVKNLRETTGSRININPE----CCPNSSERVAAIMGPPATVVKCISMIY 245
Query: 210 SRLHDNPSR 218
L P++
Sbjct: 246 DILERVPAK 254
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 2/128 (1%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S + R + P G +IG+GGA I +R+E A I + + I V+S+E
Sbjct: 93 SDKIWCRFLIPSKVAGAIIGRGGATIRALREEYQAIINIPEARAPERVLKICVNSRETLH 152
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTK 400
+S E + + S R G R+LV +S+ G +IG GS + +R T
Sbjct: 153 TIVSQIAEILKNENAKGSHNGRRKEGETEL--RILVQSSQAGAIIGTKGSTVKNLRETTG 210
Query: 401 ANIRILPK 408
+ I I P+
Sbjct: 211 SRININPE 218
>gi|356564071|ref|XP_003550280.1| PREDICTED: uncharacterized protein LOC100782717 [Glycine max]
Length = 672
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 88/161 (54%), Gaps = 18/161 (11%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDGD 106
P ++G IIG+GGE +K L++ + +KI++ + P S R V + + D A +
Sbjct: 131 PNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPD---AIATAE 187
Query: 107 KFVSPAQDALFKVH---DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
K ++ + L + ++A + G SD + +K +P++++G VIGKGG+ ++
Sbjct: 188 KLIN---EVLAEAETGGSGIVARRVAGQAGSD---EYVSK--IPNNKVGLVIGKGGETIK 239
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
N+++ TGA+I+++ HLP ++ ++I G ++ A
Sbjct: 240 NMQASTGARIQVIP-LHLPPGDTSTERTLKIEGTPEQIESA 279
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLS 344
S ++ P +G +IGKGG I ++ +SGA I+V + + D T + +
Sbjct: 125 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQV-TRDMDADPNSATRTVELMGSPDAI 183
Query: 345 ATIEAVVRLQPRCSEKIERDSGLIS-----------FTTRLLVPTSRIGCLIGKGGSIIT 393
AT E ++ +E SG+++ + ++ +P +++G +IGKGG I
Sbjct: 184 ATAEKLINE--VLAEAETGGSGIVARRVAGQAGSDEYVSK--IPNNKVGLVIGKGGETIK 239
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISG---DLDLAKDALIQVMT 440
M+ T A I+++P +LP + + ++I G ++ AK + QV++
Sbjct: 240 NMQASTGARIQVIPL-HLPPGDTSTERTLKIEGTPEQIESAKQMVNQVIS 288
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELV 192
+ K+ +P+ ++G +IGKGG+ ++ ++ ++GA+I++ +D + P+ A R+ EL+
Sbjct: 124 ASKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELM 177
>gi|452004384|gb|EMD96840.1| hypothetical protein COCHEDRAFT_1220374 [Cochliobolus
heterostrophus C5]
Length = 489
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/346 (23%), Positives = 134/346 (38%), Gaps = 81/346 (23%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQD 114
+IIG+GGE V Q+R + +K + + G+ ER++TV D A
Sbjct: 141 ATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVD--------------AVS 186
Query: 115 ALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIR 174
F + R + +E + +LL+P IG +IGK G ++ I+ + A++
Sbjct: 187 KAFGLIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLN 246
Query: 175 ILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------PSRSQHLLASAI 227
D LP+ RS + + G A V A+ +A L + P+ SQ+ S +
Sbjct: 247 -ASDTLLPNSGERS---LIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGM 302
Query: 228 SNSHSSSGSLVGPTAATPIVG--------------------------------------- 248
+ + G V P P G
Sbjct: 303 AANVVPGGMSVQPYVPQPAGGQYSHPQNFRRQEPAQRTPAHGGGYGAPHMHGQPPQQSPY 362
Query: 249 ---------IAPLMGPYGGYKGDT--------AGDWSRSLYSAPRDDLSSKEFSLRLVCP 291
+P GPYGG T A + AP + + + ++ P
Sbjct: 363 GHPNMPYGAASPSRGPYGGPAAPTPYGAHPAAAPVAHGAAPHAPVGSIPGQPLTQQIFIP 422
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+G +IGKGGA IN+IRQ SG+ IK++ + ++ L+T++ +
Sbjct: 423 NDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQ 468
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 97/242 (40%), Gaps = 21/242 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG + QIR+ SGA V S + ++TVS + D +S +VR +
Sbjct: 143 IIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQ---VDAVSKAFGLIVRTLNQE 199
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASE 417
+ S ++ RLL+P IG +IGK G I E++ + A + LP
Sbjct: 200 DLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLNAS-DTLLPNSGER 258
Query: 418 DDEMVQISGDLDLAKDALIQVMTRLRANLF---------DREGAVSTFVP----VLPYIP 464
++ ++ + +A + Q + F R G + VP V PY+P
Sbjct: 259 SLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMAANVVPGGMSVQPYVP 318
Query: 465 VSENGSDGLNYESRDSKRHGRGPPY-GGYGSSDLAAGDSYGS-YGSSQL--GGTGSAYGS 520
G R + R P + GGYG+ + S YG + G + G
Sbjct: 319 QPAGGQYSHPQNFRRQEPAQRTPAHGGGYGAPHMHGQPPQQSPYGHPNMPYGAASPSRGP 378
Query: 521 YG 522
YG
Sbjct: 379 YG 380
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI-LPKENLPKIASEDDEMVQISGDL 428
T ++ +P +G +IGKGG+ I E+R+L+ + I+I P +N ++ +V I+G
Sbjct: 415 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDN------SNERLVTITGTQ 468
Query: 429 DLAKDALIQVMTRLRA 444
+ + AL + +RL +
Sbjct: 469 ECNQMALYMLYSRLES 484
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G +T ++ +P+D +G +IGKGG + IR +G+ I+I + ++ LV I+G
Sbjct: 412 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINE-----PTDNSNERLVTITG 466
Query: 197 EASVVKKALCQIASRLHDNPSR 218
+ AL + SRL R
Sbjct: 467 TQECNQMALYMLYSRLESEKHR 488
>gi|390597786|gb|EIN07185.1| hypothetical protein PUNSTDRAFT_53562 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 356
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 116/263 (44%), Gaps = 34/263 (12%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+GG V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 68 IIGKGGAHVNEIRQKSGARVVVSESIPGNPERILNVSGPLD--------------AVSKA 113
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 114 FGLIVRRINDEPFDSASVPGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQEASGARLN-A 172
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP ++ ++ +SG A + A I + L + R H S+ S S
Sbjct: 173 SEGMLPGS---TERVLSVSGVADAIHIATYYIGNILIEANERQPHAANSSYRPSSYSRRP 229
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
T + V G Y TA + L +++ + P +G
Sbjct: 230 PYPATGGSSYVP-----GYTNPYPPPTAAALAHG-------QLQTQQIYI----PNDLVG 273
Query: 297 GVIGKGGAIINQIRQESGAAIKV 319
+IGKGGA IN+IR S + IK+
Sbjct: 274 CIIGKGGAKINEIRHMSASQIKI 296
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL---Q 354
+IGKGGA +N+IRQ+SGA + V S + ++ VS D +S +VR +
Sbjct: 68 IIGKGGAHVNEIRQKSGARVVVSESIPGNPERILNVSGP---LDAVSKAFGLIVRRINDE 124
Query: 355 PRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
P S + G + T + ++P SR+G +IGKGGS I E++ + A +
Sbjct: 125 PFDSASV---PGSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQEASGARL 170
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/211 (20%), Positives = 92/211 (43%), Gaps = 36/211 (17%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASD 97
G +++ P ++GS+IG+GG +K+++ + +++ E +PGS ERV++V +D
Sbjct: 133 GSRAVTIKFMIPNSRMGSVIGKGGSKIKEIQEASGARLNASEGMLPGSTERVLSVSGVAD 192
Query: 98 ETN--AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG------------------- 136
+ + G+ + + +
Sbjct: 193 AIHIATYYIGNILIEANERQPHAANSSYRPSSYSRRPPYPATGGSSYVPGYTNPYPPPTA 252
Query: 137 -----GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD--------EHLPS 183
G T ++ +P+D +GC+IGKGG + IR + +QI+I++ + P+
Sbjct: 253 AALAHGQLQTQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGATGQAGADGAPA 312
Query: 184 CALRSDELVQISGEASVVKKALCQIASRLHD 214
+ ++ LV I+G + ++ A+ + SRL
Sbjct: 313 GS-ENERLVVITGAPANIQMAVQLLYSRLEQ 342
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 47/88 (53%), Gaps = 14/88 (15%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP--------KENLPKIASEDDEMV 422
T ++ +P +GC+IGKGG+ I E+R ++ + I+I+ + P SE++ +V
Sbjct: 262 TQQIYIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGATGQAGADGAPA-GSENERLV 320
Query: 423 QISGDLDLAKDALIQVMTRLRANLFDRE 450
I+G A IQ+ +L + ++E
Sbjct: 321 VITG-----APANIQMAVQLLYSRLEQE 343
>gi|402590061|gb|EJW83992.1| hypothetical protein WUBG_05097, partial [Wuchereria bancrofti]
Length = 210
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 83/170 (48%), Gaps = 20/170 (11%)
Query: 53 KIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPA 112
++GSIIG+ G+ +K +R + +KI I + ER+VT+ + N
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDG--SCPERIVTITGSIGTINKA---------- 48
Query: 113 QDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
F + + ++L+ +S +T +L+VP+ Q GC+IGKGG ++ IR TGA
Sbjct: 49 ----FGMICAKLQQDLQALPNSIPKPPITMRLIVPATQCGCIIGKGGTKIKEIREATGAS 104
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
I++ E LPS R+ V ISG A + + I L + P + L
Sbjct: 105 IQV-ASEMLPSSTERA---VTISGSADSIVDCMRNICQILLEAPPKGNTL 150
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS----SKEFFEDTLSATIEAV 350
+G +IGK G I IR +SGA I + S IT S +K F + A ++
Sbjct: 2 VGSIIGKRGDHIKLIRDQSGAKINISDGSCPERIVTITGSIGTINKAF--GMICAKLQQD 59
Query: 351 VRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
++ P K T RL+VP ++ GC+IGKGG+ I E+R T A+I++ E
Sbjct: 60 LQALPNSIPKPP-------ITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQVA-SEM 111
Query: 411 LPKIASEDDEMVQISGDLDLAKDAL 435
LP S + V ISG D D +
Sbjct: 112 LP---SSTERAVTISGSADSIVDCM 133
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 246 IVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAI 305
IV I +G G + L + P + + ++RL+ P G +IGKGG
Sbjct: 35 IVTITGSIGTINKAFGMICAKLQQDLQALP-NSIPKPPITMRLIVPATQCGCIIGKGGTK 93
Query: 306 INQIRQESGAAIKVDS----SSTE 325
I +IR+ +GA+I+V S SSTE
Sbjct: 94 IKEIREATGASIQVASEMLPSSTE 117
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
R + P + G IIG+GG +K++R T + I++ E +P S ER VT+ ++D
Sbjct: 74 MRLIVPATQCGCIIGKGGTKIKEIREATGASIQVASEMLPSSTERAVTISGSAD 127
>gi|225429818|ref|XP_002280789.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 420
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 98/217 (45%), Gaps = 28/217 (12%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLS 344
+ RL+ P + +G +IG+ G II +I + +GA I V S DC++ +S+KE LS
Sbjct: 28 AFRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLISAKEQPHLRLS 87
Query: 345 ATIEAVVRLQPR------------CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+EAV+ + R CS+ E ++F LV S+ +IGK GS +
Sbjct: 88 PAMEAVIEVFKRVTGLYPIDGNGMCSKASEVKLSSVTF----LVGYSQALSIIGKEGSRV 143
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
+ + + IL + +P S D+ +++I G + A+ V+ LR L D
Sbjct: 144 RAIEESSGTTVGILSR--VPFYVSPDERIIKIQGQVLKVMAAMEAVLYHLRLYLVD---- 197
Query: 453 VSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPY 489
S+ +P SE G++ + H P +
Sbjct: 198 -SSVIPAF-----SEKCKTGISQADQSLSLHHSTPAH 228
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 137/322 (42%), Gaps = 42/322 (13%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P +R + P +GSIIGR G+I+K++ T ++I + G+ + +V +
Sbjct: 24 PGQNAFRLIVPGSAVGSIIGREGKIIKRISEGTGARIHVISLPAGTTDCIVLI------- 76
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIA-EELRGDEDSDGGHQV---TAKLLVPSDQIGCVI 155
+A E +SPA +A+ +V RV + G+ +V + LV Q +I
Sbjct: 77 SAKEQPHLRLSPAMEAVIEVFKRVTGLYPIDGNGMCSKASEVKLSSVTFLVGYSQALSII 136
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH-- 213
GK G V+ I +G + IL +P + +++I G+ V A+ + L
Sbjct: 137 GKEGSRVRAIEESSGTTVGILS--RVPFYVSPDERIIKIQGQVLKVMAAMEAVLYHLRLY 194
Query: 214 --DN---PSRSQHLLA------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
D+ P+ S+ ++S HS+ G + + PL+G +
Sbjct: 195 LVDSSVIPAFSEKCKTGISQADQSLSLHHSTPAHQPGADSMYSL----PLLGHEAKVEAK 250
Query: 263 TAGDWSRSLYSAP---------RDDLSS--KEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+S SLY+ R D ++ + + R+ P + +IG G I+ IR+
Sbjct: 251 IPSSYS-SLYAQEPVLGGLPLRRSDRAAAPAQRTERIKIPFSAAKDIIGIAGETIDHIRR 309
Query: 312 ESGAAIKVDSSSTEGDDCLITV 333
SG+ I ++ + D+ ++ V
Sbjct: 310 TSGSIITIEEDRSLPDEYILEV 331
>gi|326674258|ref|XP_003200102.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Danio rerio]
Length = 517
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV + + N
Sbjct: 81 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNV 140
Query: 103 ED--GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
D +K Q A ++ + + D AKL+VP+ G +IGKGG
Sbjct: 141 HDFIAEKVREMPQSAQKTEPVSILQPQTTVNPD----RVKQAKLIVPNSTAGLIIGKGGA 196
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
V+ + ++GA +++ + P + +V ISGE +KA+ I ++ ++P S
Sbjct: 197 TVKAVMEQSGAWVQLSQK---PDGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSS 253
Query: 221 HL 222
L
Sbjct: 254 CL 255
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 23/177 (12%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLI--TVSS 335
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI TV +
Sbjct: 77 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 136
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIG 386
D ++ VR P+ ++K E S L TT +L+VP S G +IG
Sbjct: 137 LNNVHDFIAEK----VREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIG 192
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
KGG+ + + + A +++ K P + + +V ISG+ + + A+ ++ +++
Sbjct: 193 KGGATVKAVMEQSGAWVQLSQK---PDGINLQERVVTISGEPEQNRKAVEIIVQKIQ 246
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 49/238 (20%), Positives = 92/238 (38%), Gaps = 57/238 (23%)
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
P S +R + + + T GD+ A +HD + ++ G + +
Sbjct: 30 PDSRKRPLETPTEASSTKRTNTGDRCNQAA------IHDPPFSSDIVGFHEEG---EYFL 80
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+L+PS G +IGKGGQ + ++ ETGA I++ K + P ++ + I G +
Sbjct: 81 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT---TERVCLIQGTVEAL 137
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
IA ++ + P +Q +I ++ V P
Sbjct: 138 NNVHDFIAEKVREMPQSAQKTEPVSILQPQTT----VNP--------------------- 172
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D + + + P + G +IGKGGA + + ++SGA +++
Sbjct: 173 ---------------DRVKQAKL----IVPNSTAGLIIGKGGATVKAVMEQSGAWVQL 211
>gi|383863653|ref|XP_003707294.1| PREDICTED: RNA-binding protein Nova-2-like isoform 1 [Megachile
rotundata]
Length = 514
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 101/210 (48%), Gaps = 35/210 (16%)
Query: 19 ADHGPNKRRYTGDDRDQFIIGPEDTVY-RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIR 77
A++G KR + G G + T + + L P G+IIG+GG+ + QL+ DT +K++
Sbjct: 27 AENGATKRSHYGS-------GGDGTYHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVK 79
Query: 78 IGET---VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
I ++ PG+ ERV + + + A D F+ D + + D L+ DS
Sbjct: 80 ISKSHDFYPGTTERVCLITGSLEAIMAVMD---FI---MDKIREKPDLT----LKTTVDS 129
Query: 135 DGGHQVT-----AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI---LKDEHLPSCAL 186
+ G K+LVP+ G +IGK G ++ I+ E+G+ ++I KD L
Sbjct: 130 ESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQKAKDVSL----- 184
Query: 187 RSDELVQISGEASVVKKALCQIASRLHDNP 216
+ + + GE + AL I +++ D+P
Sbjct: 185 -QERCITVIGEKENNRNALMMILAKVADDP 213
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSKEF 338
+ L+++ P G +IGKGG I Q+++++GA +K+ S T CLIT S +
Sbjct: 45 YHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAI 104
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFT------TRLLVPTSRIGCLIGKGGSII 392
+ I +R +P + K DS T ++LVP S G +IGK G+ I
Sbjct: 105 M--AVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVKILVPNSTAGMIIGKAGNYI 162
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+++ + + ++I K K S + + + G+ + ++AL+ ++ ++
Sbjct: 163 KQIKEESGSYVQISQKA---KDVSLQERCITVIGEKENNRNALMMILAKV 209
>gi|332242553|ref|XP_003270449.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Nomascus leucogenys]
Length = 440
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 71/316 (22%), Positives = 150/316 (47%), Gaps = 37/316 (11%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
++ K+L ++ +G +IGK G+ ++ I +T +I I + L + + + G
Sbjct: 137 EIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSV 194
Query: 199 SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG 258
KA +I ++ ++ ++ +AS +H G + +G+ P P G
Sbjct: 195 ETCAKAEEEIMKKIRES---YENDIASMNVQTHLIPGLNLND------LGLFP---PTSG 242
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
T+G S P+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK
Sbjct: 243 MPPPTSGPPSAMTPPYPQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIK 301
Query: 319 VDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTR 373
+ + E D + + ++ EA + Q R KI+ ++ + +
Sbjct: 302 I--APAEAPDAKVRMV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAH 352
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---D 429
+ VP+ G +IGKGG + E++ L+ A + ++P++ P E+D+ +V+I+G
Sbjct: 353 IRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQ 408
Query: 430 LAKDALIQVMTRLRAN 445
+A+ + +++T+++ +
Sbjct: 409 VAQRKIQEILTQVKQH 424
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 82/186 (44%), Gaps = 42/186 (22%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 260 QFEQSETETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 318
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H R V
Sbjct: 319 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIR-----------------------V 355
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKAL 205
PS G VIGKGG+ V +++ + A++ + +D+ +D+ +V+I+G
Sbjct: 356 PSFAAGRVIGKGGKTVNELQNLSSAEVVVPRDQ----TPDENDQVVVKITGHFYA----- 406
Query: 206 CQIASR 211
CQ+A R
Sbjct: 407 CQVAQR 412
>gi|451855342|gb|EMD68634.1| hypothetical protein COCSADRAFT_350318 [Cochliobolus sativus
ND90Pr]
Length = 488
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 134/345 (38%), Gaps = 80/345 (23%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQD 114
+IIG+GGE V Q+R + +K + + G+ ER++TV D A
Sbjct: 141 ATIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVD--------------AVS 186
Query: 115 ALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIR 174
F + R + +E + +LL+P IG +IGK G ++ I+ + A++
Sbjct: 187 KAFGLIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLN 246
Query: 175 ILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------PSRSQHLLASAI 227
D LP+ RS + + G A V A+ +A L + P+ SQ+ S +
Sbjct: 247 -ASDTLLPNSGERS---LIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGM 302
Query: 228 SNSHSSSGSLVGPTAATPIVG--------------------------------------- 248
+ + G V P P G
Sbjct: 303 AANVVPGGMSVQPYVPQPAGGQYSHPQNFRRQEPAQRTPAHGGYGAPHMHGQPPQQSPYG 362
Query: 249 --------IAPLMGPYGGYKGDT--------AGDWSRSLYSAPRDDLSSKEFSLRLVCPV 292
+P GPYGG T A + AP + + + ++ P
Sbjct: 363 HPNMPYGAASPSRGPYGGPAAPTPYGAHPAAAPVAHGAAPHAPVGAIPGQPLTQQIFIPN 422
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+G +IGKGGA IN+IRQ SG+ IK++ + ++ L+T++ +
Sbjct: 423 DMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQ 467
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 97/241 (40%), Gaps = 20/241 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG + QIR+ SGA V S + ++TVS + D +S +VR +
Sbjct: 143 IIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQ---VDAVSKAFGLIVRTLNQE 199
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASE 417
+ S ++ RLL+P IG +IGK G I E++ + A + LP
Sbjct: 200 DLETPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLNAS-DTLLPNSGER 258
Query: 418 DDEMVQISGDLDLAKDALIQVMTRLRANLF---------DREGAVSTFVP----VLPYIP 464
++ ++ + +A + Q + F R G + VP V PY+P
Sbjct: 259 SLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMAANVVPGGMSVQPYVP 318
Query: 465 VSENGSDGLNYESRDSKRHGRGPPYGGYGSSDLAAGDSYGS-YGSSQL--GGTGSAYGSY 521
G R + R P +GGYG+ + S YG + G + G Y
Sbjct: 319 QPAGGQYSHPQNFRRQEPAQRTPAHGGYGAPHMHGQPPQQSPYGHPNMPYGAASPSRGPY 378
Query: 522 G 522
G
Sbjct: 379 G 379
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 44/76 (57%), Gaps = 7/76 (9%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI-LPKENLPKIASEDDEMVQISGDL 428
T ++ +P +G +IGKGG+ I E+R+L+ + I+I P +N ++ +V I+G
Sbjct: 414 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDN------SNERLVTITGTQ 467
Query: 429 DLAKDALIQVMTRLRA 444
+ + AL + +RL +
Sbjct: 468 ECNQMALYMLYSRLES 483
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G +T ++ +P+D +G +IGKGG + IR +G+ I+I + ++ LV I+G
Sbjct: 411 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINE-----PTDNSNERLVTITG 465
Query: 197 EASVVKKALCQIASRLHDNPSR 218
+ AL + SRL R
Sbjct: 466 TQECNQMALYMLYSRLESEKHR 487
>gi|71997383|ref|NP_001023000.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
gi|373218578|emb|CCD61629.1| Protein ZK418.9, isoform a [Caenorhabditis elegans]
Length = 557
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/387 (22%), Positives = 163/387 (42%), Gaps = 66/387 (17%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
Y P + +G +IG+GG S+IR+ + G V + N F +
Sbjct: 58 YPVPEKVVGLVIGKGG-----------SEIRLIQQTSGCR---VQMDPDHQSVNGFRNCT 103
Query: 107 KFVSPAQDALFK-VHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
P Q A+ + + +VI G + +VT ++L+P+D+IG VIGKGG+ ++ +
Sbjct: 104 IEGPPDQVAVARQMITQVINRNQTGAQPGAAPGEVTEEMLIPADKIGLVIGKGGETIRIV 163
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ ++G LR+ +VQ + A+ K L I S +++ L+ +
Sbjct: 164 QEQSG---------------LRNCNVVQETTTATGQPKPLRMIGSPAAIETAKA--LVHN 206
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFS 285
++N+ ++ P++ AP P G + G Y A +
Sbjct: 207 IMNNTQGNA----------PLLQRAPHQ-PSGQFGGG---------YGA-----QEAQAK 241
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLITVSSKEFFEDTL 343
++ P + G +IGKGG +I ++ E+G I K D++ D + + +++
Sbjct: 242 GEVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRAT 301
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTR----LLVPTSRIGCLIGKGGSIITEMRRLT 399
E V R +R S + + VP + G +IGKGG I ++ R T
Sbjct: 302 ERITEIVNRAIKNNGAPQDRGSAGTVLPGQSIFYMHVPAGKCGLVIGKGGENIKQIERET 361
Query: 400 KANIRILPKENLPKIASEDDEMVQISG 426
A + P + +ED+++ +I G
Sbjct: 362 GATCGLAPAA---EQKNEDEKVFEIKG 385
>gi|320588068|gb|EFX00543.1| kh domain protein RNA-binding protein [Grosmannia clavigera kw1407]
Length = 375
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 138/300 (46%), Gaps = 43/300 (14%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
R + ++ G IIG+GG+ V LR +T K + + V G +RV+T+ D +
Sbjct: 48 TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCDAIS--- 104
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
+ A+ L V + L+G +G H + KLL+ +Q+G VIG+GG ++
Sbjct: 105 --KAYAVVARALLEGVPTMGMGGILQG----NGTHPI--KLLISHNQMGTVIGRGGLKIK 156
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-SQHL 222
+I+ +G ++ KD LP R +V++ G ++KA+ +I L D+ R + +
Sbjct: 157 HIQDVSGVRMVAQKD-ILPQSTER---IVEVQGTPEGIQKAVWEICKCLVDDWQRGTGTV 212
Query: 223 LASAISNSHSSSGSL----VGPTAATPIVGIAPLMGPYGGYKGDTAG---DWSRSLYSAP 275
L + + + +S +L + PT+ G + YG + G D+S S P
Sbjct: 213 LYNPVVRTQGTSPTLGSGSIAPTSNYNSGGRS----EYGNSRVTRTGNGADFSNGASSRP 268
Query: 276 RDDLSSKEFSLR----------------LVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ S + + R + P +G +IG+ G+ I++IR+ SGA I +
Sbjct: 269 NNRRSDSDAAARGPPTHDEQGNEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISI 328
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 4/86 (4%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
D G T + +P+D +GC+IG+ G + IR +GA+I I K H + + +
Sbjct: 286 DEQGNEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDET----GERMF 341
Query: 193 QISGEASVVKKALCQIASRLHDNPSR 218
I G A + AL + L R
Sbjct: 342 TIMGSAKANETALFLLYENLEAEKMR 367
>gi|296085941|emb|CBI31382.3| unnamed protein product [Vitis vinifera]
Length = 357
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/285 (22%), Positives = 126/285 (44%), Gaps = 54/285 (18%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASD 97
+ T R+L GS+IG+GG + + + ++I++ E PG+ +R++ + A++
Sbjct: 80 KSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTSDRIIMISGATN 139
Query: 98 ETNAFEDGDKFVSPAQDALFKVHDRVIAE---ELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
E + K + ++A+ E+ ++ + + +L+VP+ G +
Sbjct: 140 E-----------------IIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSSCGGI 182
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IGKGG +++ ++ A I+I ++ + +D LV + G +A+ I S+L +
Sbjct: 183 IGKGGSTIKSFIEDSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQMRAIDLILSKLTE 240
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
+P +Q + + S + + + GP A GG + D S S+
Sbjct: 241 DPHYTQ-FMNAPFSYAAAYNSMNYGPNGA-------------GGKFQNNKEDRSNSVTIG 286
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D+ +IG V+G+GG I I Q SGA IK+
Sbjct: 287 VADE---------------HIGLVVGRGGRNIMDISQASGARIKI 316
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 28/182 (15%)
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+P D K +R + A G VIGKGG+ IN + +SGA I++
Sbjct: 72 SPTSDFMEKSTYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLS------------- 118
Query: 334 SSKEFFEDT------LSATIEAVVRLQPRCSEKI-------ERDSGLISFTTRLLVPTSR 380
+ EFF T +S +++ K+ + D RL+VP S
Sbjct: 119 RNHEFFPGTSDRIIMISGATNEIIKAMELILAKLLSEMHTEDGDEADPRSKVRLIVPNSS 178
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
G +IGKGGS I ++A+I+I P++N D +V + G L+ A+ +++
Sbjct: 179 CGGIIGKGGSTIKSFIEDSQASIKISPQDN--NYLGLTDRLVTLMGSLEEQMRAIDLILS 236
Query: 441 RL 442
+L
Sbjct: 237 KL 238
>gi|154319404|ref|XP_001559019.1| hypothetical protein BC1G_02183 [Botryotinia fuckeliana B05.10]
Length = 453
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 135/311 (43%), Gaps = 54/311 (17%)
Query: 56 SIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA 115
++IG+GGE V +R + +K + + G+ ER++TV S DA
Sbjct: 139 TVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTV-----------------SGVVDA 181
Query: 116 LFKVHDRVI----AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
+ K +I E L DS +LL+P IG +IGKGG ++ I+ +GA
Sbjct: 182 VAKAFGLIIRTLNNEPLEAPSDSTS-KTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGA 240
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------PSRSQH--- 221
++ D +LP L ++ + + G A V A + S L + P+ S +
Sbjct: 241 RLN-ASDSYLP---LSTERSLVVLGVADAVHIATYYVGSTLFEQLTERFGGPAASAYASR 296
Query: 222 ------LLASAISNSHSSSGSLVGPTAATPIVG--IAPLMGPYGGY---KGDTAGDWSRS 270
++ A+ N L I G +P +G YGG + AG
Sbjct: 297 SGGPAGVVPGAMPNHTVKDRHLTNSQLPLHITGGHASPAVGGYGGVGPQQPQQAGHAVPQ 356
Query: 271 LYSA--PRDD-----LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS 323
+ A P+ + + + ++ P +G +IGKGGA IN+IRQ SG+ IK++
Sbjct: 357 PHGATGPQGQPMPGAIPGQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQ 416
Query: 324 TEGDDCLITVS 334
++ L+T++
Sbjct: 417 DNSNERLVTIT 427
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 60/129 (46%), Gaps = 5/129 (3%)
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
P D+ S +R V A VIGKGG ++ +R+ SGA V + ++TVS
Sbjct: 119 PHDE--SGWIHVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERILTVS 176
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITE 394
D ++ ++R + DS ++ RLL+P IG +IGKGG I E
Sbjct: 177 G---VVDAVAKAFGLIIRTLNNEPLEAPSDSTSKTYPLRLLIPHILIGSIIGKGGVRIKE 233
Query: 395 MRRLTKANI 403
++ + A +
Sbjct: 234 IQEASGARL 242
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G +T ++ +P+D +G +IGKGG + IR +G+ I+I + + ++ LV I+G
Sbjct: 374 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDN-----SNERLVTITG 428
Query: 197 EASVVKKALCQIASRLHDNPSRS 219
A + AL + SRL R+
Sbjct: 429 TAECNQMALYMLYSRLESERHRA 451
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI-LPKENLPKIASEDDEMVQISGDL 428
T ++ +P +G +IGKGG+ I E+R+L+ + I+I P++N ++ +V I+G
Sbjct: 377 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDN------SNERLVTITGTA 430
Query: 429 DLAKDALIQVMTRLRA 444
+ + AL + +RL +
Sbjct: 431 ECNQMALYMLYSRLES 446
>gi|313228809|emb|CBY17960.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 32/213 (15%)
Query: 10 KRSHSQTDYADHGPNKRRYT----GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
KR H Q D KR G RD+ +G +R+L P + G++IG+GG +
Sbjct: 105 KRGHGQDSQGDF---KRSRPSGGYGQKRDEPGVG-----HRFLIPSKMAGAVIGKGGTTI 156
Query: 66 KQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
K LR D ++ + + ERV+ D VSP + + + +
Sbjct: 157 KSLRSDFACQLNVPDAQ--GPERVLRFVCE----------DSNVSPLIEKVGNLLRNDMV 204
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E R DSD + ++LV + G VIG G+ ++ +R +TG +I + +D
Sbjct: 205 ERNRAQADSD----IDMRMLVHQSKAGAVIGFKGETIKGLRDKTGCKINVYQD----PAP 256
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
SD L++++G+ + +I L+D P +
Sbjct: 257 HSSDRLIKVAGQPDKIATCFGEILLILNDIPPK 289
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 25/211 (11%)
Query: 258 GYKGDTAGDWSRSL----YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQES 313
G+ D+ GD+ RS Y RD+ R + P G VIGKGG I +R S
Sbjct: 107 GHGQDSQGDFKRSRPSGGYGQKRDEPGVGH---RFLIPSKMAGAVIGKGGTTIKSLR--S 161
Query: 314 GAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLI--SFT 371
A +++ +G + ++ + + +S IE V L ++ +ER+
Sbjct: 162 DFACQLNVPDAQGPERVLRFVCE---DSNVSPLIEKVGNL--LRNDMVERNRAQADSDID 216
Query: 372 TRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP------KENLPKIASEDDEMVQIS 425
R+LV S+ G +IG G I +R T I + + L K+A + D++
Sbjct: 217 MRMLVHQSKAGAVIGFKGETIKGLRDKTGCKINVYQDPAPHSSDRLIKVAGQPDKIATCF 276
Query: 426 GDLDLAKDALIQVMTRLRANLFDREGAVSTF 456
G++ L L + + FD E A STF
Sbjct: 277 GEILL---ILNDIPPKGFVQEFDPENADSTF 304
>gi|452846671|gb|EME48603.1| hypothetical protein DOTSEDRAFT_67594 [Dothistroma septosporum
NZE10]
Length = 361
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 135/296 (45%), Gaps = 49/296 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR T + + + VPG +RV+TV A D
Sbjct: 45 RAIVTSKEAGVIIGKAGQNVADLREKTGVRAGVSKVVPGVHDRVLTVTGA---LTGIADA 101
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
V+ D+L K ++ + G+ ++ H + +LL+ +Q+G +IG+ G ++ I
Sbjct: 102 YGLVA---DSLVKGAPQMGMGGVVGNPNT---HPI--RLLISHNQMGTIIGRQGLKIKQI 153
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ +G ++ + + E LP ++ +V++ G ++KA+ +I L D+ R +
Sbjct: 154 QDASGVRM-VAQKEMLPQS---TERIVEVQGTPDGIQKAVWEIGKCLVDDEQRGYGTVLY 209
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG----DTAGDWSRSLYSAPR----- 276
+ + G P+ G +GP GY + G+ + +AP
Sbjct: 210 SPAVRVQGGGP--------PLNGTGAPVGPGAGYGAPRSYNRTGNGADFTGAAPAPYSPR 261
Query: 277 -------------DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+D+ ++ S+ P +G +IG+GG+ I++IR+ SGA I +
Sbjct: 262 RQEGPLPTTNEDGEDIQTQNISI----PADMVGCIIGRGGSKISEIRKSSGARISI 313
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+ DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + +
Sbjct: 271 NEDGEDIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKAPHDET----GERMF 326
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
I+G ++ +KAL + L R + +A
Sbjct: 327 TITGGSAANEKALYLLYENLEAEKMRRSQIPEAA 360
>gi|121710626|ref|XP_001272929.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
gi|119401079|gb|EAW11503.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
Length = 362
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 34/289 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T +
Sbjct: 47 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGPLQGT 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L + ++ + G +++G H V +LL+ +Q+G +IG+ G +++I
Sbjct: 101 ARAYALVAKGLLEGAPQM---GMGGIVNNNGTHPV--RLLISHNQMGTIIGRQGLKIKHI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--LL 223
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R L
Sbjct: 156 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILY 211
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLM----------GPYGGYKGDTAGDWSRSLYS 273
A+ S + S+ T A+ P G GY + D S Y
Sbjct: 212 NPAVRASVGTGSSINTNTTASNGYNSRPYNRTGNGADFSDGQSAGYSRRSNPDTSNRGYP 271
Query: 274 APRDD---LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+D + ++ S+ P +G +IG+GG+ I +IR+ SGA I +
Sbjct: 272 LVTEDGEEIQTQNISI----PADMVGCIIGRGGSKITEIRRSSGARISI 316
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 276 DGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDET----GERMFTI 331
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 332 MGSAQANEKALYLLYENLEAEKTRRSQL 359
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T + +P +GC+IG+GGS ITE+RR + A I I
Sbjct: 282 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISI 316
>gi|291405848|ref|XP_002719162.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein
1-like, partial [Oryctolagus cuniculus]
Length = 570
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 84/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++++S + +
Sbjct: 188 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEGCS 247
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 248 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 290
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 291 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREA--- 343
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 344 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 399
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 400 V------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 448
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 449 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 504
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 505 ELQNLTAAEV-VVPRDQTP---DENDQVI 529
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE V + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 392 FMQAPEQEVVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 451
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 452 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 488
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 489 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 520
>gi|327274617|ref|XP_003222073.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Anolis carolinensis]
Length = 584
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 89/404 (22%), Positives = 182/404 (45%), Gaps = 77/404 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + ++
Sbjct: 200 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCSS--- 256
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++I E ++ + +D+ ++ K+L ++ +G +IGK G+ ++
Sbjct: 257 ---------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 301
Query: 164 NIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSR 218
I +T +I I L+D L + + + G KA +I ++ ++N
Sbjct: 302 KIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRESYENDIA 357
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPI---VGIAPLMG-----PYGGYKGDTAGDWSRS 270
+ +L A I + ++ L P+++ VG+A P+G
Sbjct: 358 AMNLQAHLIPGLNLNALGLFPPSSSGIPPPSVGVASAASASSYPPFG------------- 404
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
P + ++ L P +G +IGK G I Q+ + +GA+IK+ + EG +
Sbjct: 405 --QQPESE------TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPEAK 454
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLI 385
+ + ++ EA + Q R K++ ++ + + VP+ G +I
Sbjct: 455 LRMV-------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVI 507
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
GKGG + E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 508 GKGGKTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 547
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 81/183 (44%), Gaps = 15/183 (8%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
E LR++ P +G +IGK GA I I +++ + I + G + K T
Sbjct: 196 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAG------AAEKPI---T 246
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLISFT----TRLLVPTSRIGCLIGKGGSIITEMRRL 398
+ +T E E +++++ FT ++L + +G LIGK G + ++ +
Sbjct: 247 IHSTPEGCSSACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQD 306
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
T I I P ++L + + + G ++ A ++M ++R + + A++
Sbjct: 307 TDTKITISPLQDL--TLYNPERTITVKGSIETCAKAEEEIMKKIRESYENDIAAMNLQAH 364
Query: 459 VLP 461
++P
Sbjct: 365 LIP 367
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 79/176 (44%), Gaps = 31/176 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
PE P +G+IIG+ G+ +KQL + I+I G E ++ V
Sbjct: 407 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIA-PAEGPEAKLRMV------- 458
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIGCVIG 156
++ +A FK R+ + +E+ G + + A + VPS G VIG
Sbjct: 459 --------IITGPPEAQFKAQGRIYGK--LKEENFFGPKEEVKLEAHIKVPSYAAGRVIG 508
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
KGG+ V +++ T A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 509 KGGKTVNELQNLTSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQLAQR 555
>gi|432895615|ref|XP_004076076.1| PREDICTED: RNA-binding protein Nova-1-like isoform 2 [Oryzias
latipes]
Length = 444
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 89/182 (48%), Gaps = 12/182 (6%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV + + N+
Sbjct: 9 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNSV 68
Query: 103 ED--GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
+ +K Q A ++ + + D AKL+VP+ G +IGKGG
Sbjct: 69 HNFIAEKVREMPQSAQKPEPVSILQPQTTVNPD----RVKQAKLIVPNSTAGLIIGKGGA 124
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
V+ + ++GA +++ + P + +V ISGE +KA+ I ++ ++P S
Sbjct: 125 TVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSS 181
Query: 221 HL 222
L
Sbjct: 182 CL 183
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 5 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 64
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+++ I VR P+ ++K E S L TT +L+VP S G +IGKG
Sbjct: 65 L--NSVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKG 122
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V ISG+ + + A+ ++ +++
Sbjct: 123 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTISGEPEQNRKAVEIIVQKIQ 174
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + ++A L E G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 331 ASNGYLNASSPLMASSLLATEKLADGAKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 390
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I+ R+
Sbjct: 391 RIQISKKGEFIPGTRNRK---VTITGSPAATQAAQYLISQRI 429
>gi|119498177|ref|XP_001265846.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
gi|119414010|gb|EAW23949.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
Length = 360
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 134/293 (45%), Gaps = 43/293 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T +
Sbjct: 46 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGPLQGT 99
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L + ++ + G +++G H V +LL+ +Q+G +IG+ G +++I
Sbjct: 100 ARAYALVAKGLLEGAPQM---GMGGIVNNNGTHPV--RLLISHNQMGTIIGRQGLKIKHI 154
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--LL 223
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R L
Sbjct: 155 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILY 210
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY--------------GGYKGDTAGDWSR 269
A+ S S S+ T VG PY GGY + D S
Sbjct: 211 NPAVRASVGGSTSM-----NTSSVGNGYNSRPYNRTGNGADFSDGQSGGYGRRSNPDTSN 265
Query: 270 SLYSAPRDD---LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
Y +D + ++ S+ P +G +IG+GG+ I +IR+ SGA I +
Sbjct: 266 RGYPLVTEDGEEIQTQNISI----PADMVGCIIGRGGSKITEIRRSSGARISI 314
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 274 DGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDET----GERMFTI 329
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 330 MGSAQANEKALYLLYENLEAEKTRRSQL 357
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T + +P +GC+IG+GGS ITE+RR + A I I
Sbjct: 280 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISI 314
>gi|51472291|gb|AAU04539.1| neurological oncogenic ventral antigen protein [Danio rerio]
Length = 473
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 88/182 (48%), Gaps = 12/182 (6%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV + + N
Sbjct: 66 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNNV 125
Query: 103 ED--GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
D +K Q A ++ + + D AKL+VP+ G +IGKGG
Sbjct: 126 HDFIAEKVREMPQSAQKTEPVSILQPQTTVNPD----RVKQAKLVVPNSTAGLIIGKGGA 181
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
V+ + ++GA +++ + P + +V ISGE +KA+ I ++ ++P S
Sbjct: 182 TVKAVMEQSGAWVQLSQK---PDGINLQERVVTISGEPEQNRKAVEIIVQKIQEDPQSSS 238
Query: 221 HL 222
L
Sbjct: 239 CL 240
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 89/177 (50%), Gaps = 23/177 (12%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLI--TVSS 335
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI TV +
Sbjct: 62 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 121
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIG 386
D ++ VR P+ ++K E S L TT +L+VP S G +IG
Sbjct: 122 LNNVHDFIAEK----VREMPQSAQKTEPVSILQPQTTVNPDRVKQAKLVVPNSTAGLIIG 177
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
KGG+ + + + A +++ K P + + +V ISG+ + + A+ ++ +++
Sbjct: 178 KGGATVKAVMEQSGAWVQLSQK---PDGINLQERVVTISGEPEQNRKAVEIIVQKIQ 231
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 91/238 (38%), Gaps = 57/238 (23%)
Query: 83 PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTA 142
P S +R + + + T GD+ A +HD + ++ G + +
Sbjct: 15 PDSRKRPLETPTEASSTKRTNTGDRCNQAA------IHDPPFSSDIVGFHEEG---EYFL 65
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+L+PS G +IGKGGQ + ++ ETGA I++ K + P R + I G +
Sbjct: 66 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTER---VCLIQGTVEAL 122
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
IA ++ + P +Q +I ++ V P
Sbjct: 123 NNVHDFIAEKVREMPQSAQKTEPVSILQPQTT----VNP--------------------- 157
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D + + V P + G +IGKGGA + + ++SGA +++
Sbjct: 158 ---------------DRVKQAKL----VVPNSTAGLIIGKGGATVKAVMEQSGAWVQL 196
>gi|46125203|ref|XP_387155.1| hypothetical protein FG06979.1 [Gibberella zeae PH-1]
Length = 372
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 135/296 (45%), Gaps = 38/296 (12%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
R + ++ G IIG+GG+ V LR +T K + + V G +RV+T+ D A
Sbjct: 48 TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCD---AIS 104
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
V+ A + + A + G S+G H + KLL+ +Q+G +IG+ G ++
Sbjct: 105 RAYAIVARA------LLEGAPAMGMGGVVQSNGTHPI--KLLISHNQMGTIIGRQGLKIK 156
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-SQHL 222
+I+ +G ++ + + E LP R +V++ G +++A+ +I L D+ R + +
Sbjct: 157 HIQDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIQRAIWEICKCLVDDWQRGTGTV 212
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGG----YKGDTAGDWSR--------- 269
L + + + SSG G T+ YGG + D+S
Sbjct: 213 LYNPVVRTQPSSG---GNTSGGAGFNQGSGRSDYGGSPRVMRTGNGADFSNGSSRPYNRR 269
Query: 270 -----SLYSAPRDDLSSKEFSLR-LVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+L P D + +E + + P +G +IG+ G+ I++IR+ SGA I +
Sbjct: 270 SDSDAALRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISI 325
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 6/97 (6%)
Query: 128 LRG--DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
LRG D +G T + +P+D +GC+IG+ G + IR +GA+I I K H +
Sbjct: 276 LRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDET-- 333
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL 222
+ + I G A + AL + L R L
Sbjct: 334 --GERMFTIMGTAKANESALFLLYENLEAEKMRRSQL 368
>gi|443685583|gb|ELT89137.1| hypothetical protein CAPTEDRAFT_171528 [Capitella teleta]
Length = 398
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 86/179 (48%), Gaps = 35/179 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDETNAFE 103
R L + G+IIG+GG +K+LR D + + TVP S ERV+TV ++ A E
Sbjct: 29 RILLQSKNAGAIIGKGGANIKRLRSDYNATV----TVPDSSGPERVLTV--GANLGTALE 82
Query: 104 ---DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
D V P+ + + D E+R L+ Q GCVIG+GG
Sbjct: 83 ILLD----VIPSLEDYKRFKDLEFECEMR--------------WLIHQSQAGCVIGRGGN 124
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASRLHDNPSR 218
++ +R ETGAQI++ CA +S E +VQ++G+ VV +L I L P +
Sbjct: 125 KIKELRDETGAQIKVYS-----QCAPQSSERIVQLTGKPRVVVNSLATIFDLLQTAPPK 178
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 14/160 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
LR++ N G +IGKGGA I ++R + A + V SS G + ++TV + L
Sbjct: 28 LRILLQSKNAGAIIGKGGANIKRLRSDYNATVTVPDSS--GPERVLTVGA------NLGT 79
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+E ++ + P + R L+ S+ GC+IG+GG+ I E+R T A I++
Sbjct: 80 ALEILLDVIPSLEDYKRFKDLEFECEMRWLIHQSQAGCVIGRGGNKIKELRDETGAQIKV 139
Query: 406 LPKENLPKIASEDDE-MVQISGDLDLAKDALIQVMTRLRA 444
+ A + E +VQ++G + ++L + L+
Sbjct: 140 -----YSQCAPQSSERIVQLTGKPRVVVNSLATIFDLLQT 174
Score = 42.0 bits (97), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%)
Query: 296 GGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
G +IGKGG+ I QIRQESGA I +D D +IT++ +
Sbjct: 336 GAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQ 377
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 32/44 (72%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
G+IIG+GG ++Q+R ++ + I I E + GS++R++T+ + D+
Sbjct: 336 GAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQDQ 379
>gi|334188353|ref|NP_001190526.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332008916|gb|AED96299.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 198
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T YR LC K G +IG+ G I+K +R T + I + E VPG ER++ + SD
Sbjct: 68 TTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEI---SDNRRRD 124
Query: 103 EDGD-KFVSPAQDALFKVHDRVIAEE 127
DG SPAQ+ALF VHDR++ E
Sbjct: 125 PDGRMPSFSPAQEALFSVHDRILESE 150
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 23/35 (65%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ R++C A GGVIGK G II IRQ +GA I V
Sbjct: 69 TYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINV 103
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 86/173 (49%), Gaps = 10/173 (5%)
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS---TEGDDC 329
+A +D K LR + G +IGKGG+ IN + +SGA I++ S +D
Sbjct: 38 AADHEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDR 97
Query: 330 LITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
+I VS F++ + A +E V L+ SE E + RL+VP S G +IGKGG
Sbjct: 98 IIMVSG--LFDEVVKA-MELV--LEKLLSEGEESNEAEARPKFRLVVPNSSCGGIIGKGG 152
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+ I + A I+I P++N D +V I+G L+ A+ ++++L
Sbjct: 153 ATIKSFIEDSHAGIKISPQDN--NFVGLHDRLVTITGPLNSQMRAIHLILSKL 203
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 144/319 (45%), Gaps = 50/319 (15%)
Query: 19 ADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
ADH P DD+++ T R+L G IIG+GG + + + ++I++
Sbjct: 33 ADHDPAADHE--DDKEK------PTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQL 84
Query: 79 G---ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD 135
E PG+ +R++ V DE A+ V +++++E G+E ++
Sbjct: 85 SRSHEFFPGTNDRIIMVSGLFDEV-------------VKAMELVLEKLLSE---GEESNE 128
Query: 136 GGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQIS 195
+ +L+VP+ G +IGKGG +++ ++ A I+I ++ + D LV I+
Sbjct: 129 AEARPKFRLVVPNSSCGGIIGKGGATIKSFIEDSHAGIKISPQDN--NFVGLHDRLVTIT 186
Query: 196 GEASVVKKALCQIASRL----HDNPSRSQHLLASAIS-NSHSSS---GSLVGPTAATPIV 247
G + +A+ I S+L H P+ S + + S+ ++ G ++ P V
Sbjct: 187 GPLNSQMRAIHLILSKLSEDVHYPPNLSSPFPYAGLGFPSYPAAVPVGYMIPPVPYNNTV 246
Query: 248 GIAP--LMGPYGG-----YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIG 300
P P GG Y+ + G RS P ++ + + ++ + +IG V+G
Sbjct: 247 NYGPNGYAAPGGGGGGGRYQNNKPGTPVRS----PANNDAQESHTIGVAD--EHIGAVVG 300
Query: 301 KGGAIINQIRQESGAAIKV 319
+ G I +I Q SGA IK+
Sbjct: 301 RAGRNITEIIQASGARIKI 319
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV---DSSSTEGDDCLITVSSKEFFEDT 342
RLV P ++ GG+IGKGGA I ++S A IK+ D++ D L+T++
Sbjct: 135 FRLVVPNSSCGGIIGKGGATIKSFIEDSHAGIKISPQDNNFVGLHDRLVTITGP------ 188
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLIS 369
L++ + A+ + + SE + L S
Sbjct: 189 LNSQMRAIHLILSKLSEDVHYPPNLSS 215
>gi|328702094|ref|XP_003241800.1| PREDICTED: hypothetical protein LOC100161431 isoform 2
[Acyrthosiphon pisum]
gi|328702096|ref|XP_001944651.2| PREDICTED: hypothetical protein LOC100161431 isoform 1
[Acyrthosiphon pisum]
Length = 657
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 93/190 (48%), Gaps = 25/190 (13%)
Query: 37 IIGPEDTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVT 91
+ G D +Y + L P G+IIG+GGE + QL+ +T +KI++ +T PG+ ERV
Sbjct: 188 VAGNSDGMYHMKILIPCITAGAIIGKGGETIAQLQTETNTKIKMSKTNDFYPGTTERVCI 247
Query: 92 VYSASDE--TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSD 149
+ +S E A + + DA +V + GD +D QV K+L+P+
Sbjct: 248 ISGSSSEHIMAALTFIMERIREKPDASNRVQN-------SGDAIADREKQV--KILIPNS 298
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRI---LKDEHLPSCALRSDELVQISGEASVVKKALC 206
G +IGK G ++ ++ ++G ++I KD L + + +SG KK
Sbjct: 299 TAGMIIGKAGAYIKQLKEDSGCFVQISQKAKDTTL------QERCITVSGNTEGNKKVCL 352
Query: 207 QIASRLHDNP 216
I +++ ++P
Sbjct: 353 CILNKIIEDP 362
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 96/207 (46%), Gaps = 23/207 (11%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEF 338
+ ++++ P G +IGKGG I Q++ E+ IK+ ++ T C+I+ SS E
Sbjct: 196 YHMKILIPCITAGAIIGKGGETIAQLQTETNTKIKMSKTNDFYPGTTERVCIISGSSSEH 255
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGKGGSIITEM 395
L+ +E +R +P S +++ I+ ++L+P S G +IGK G+ I ++
Sbjct: 256 IMAALTFIMER-IREKPDASNRVQNSGDAIADREKQVKILIPNSTAGMIIGKAGAYIKQL 314
Query: 396 RRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL----------RAN 445
+ + ++I K K + + + +SG+ + K + ++ ++ +
Sbjct: 315 KEDSGCFVQISQKA---KDTTLQERCITVSGNTEGNKKVCLCILNKIIEDPLSASCPNLS 371
Query: 446 LFDREGAVSTFVPV-LPYIPVSENGSD 471
D G V+ F P PY + N S+
Sbjct: 372 YADVNGPVANFNPTGSPYALATTNCSN 398
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 95/231 (41%), Gaps = 72/231 (31%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDEL 191
+SDG + + K+L+P G +IGKGG+ + +++ET +I++ K ++ P ++ +
Sbjct: 191 NSDGMYHM--KILIPCITAGAIIGKGGETIAQLQTETNTKIKMSKTNDFYPG---TTERV 245
Query: 192 VQISGEASV-VKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
ISG +S + AL I R+ + P S + S
Sbjct: 246 CIISGSSSEHIMAALTFIMERIREKPDASNRVQNSG------------------------ 281
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
D ++ +E ++++ P + G +IGK GA I Q++
Sbjct: 282 --------------------------DAIADREKQVKILIPNSTAGMIIGKAGAYIKQLK 315
Query: 311 QESGAAIKVD---------------SSSTEGDDCLITVSSKEFFEDTLSAT 346
++SG +++ S +TEG+ + + ED LSA+
Sbjct: 316 EDSGCFVQISQKAKDTTLQERCITVSGNTEGNKKVCLCILNKIIEDPLSAS 366
>gi|70989127|ref|XP_749413.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847044|gb|EAL87375.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|159128828|gb|EDP53942.1| KH domain RNA-binding protein [Aspergillus fumigatus A1163]
Length = 355
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 134/293 (45%), Gaps = 43/293 (14%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T +
Sbjct: 41 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGPLQGT 94
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L + ++ + G +++G H V +LL+ +Q+G +IG+ G +++I
Sbjct: 95 ARAYALVAKGLLEGAPQM---GMGGIVNNNGTHPV--RLLISHNQMGTIIGRQGLKIKHI 149
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--LL 223
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R L
Sbjct: 150 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTILY 205
Query: 224 ASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY--------------GGYKGDTAGDWSR 269
A+ S S S+ T VG PY GGY + D S
Sbjct: 206 NPAVRASVGGSTSM-----NTSSVGNGYSSRPYNRTGNGADFSDGQSGGYGRRSNPDTSN 260
Query: 270 SLYSAPRDD---LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
Y +D + ++ S+ P +G +IG+GG+ I +IR+ SGA I +
Sbjct: 261 RGYPLVTEDGEEIQTQNISI----PADMVGCIIGRGGSKITEIRRSSGARISI 309
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 269 DGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKAPHDET----GERMFTI 324
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 325 MGSAQANEKALYLLYENLEAEKTRRSQL 352
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T + +P +GC+IG+GGS ITE+RR + A I I
Sbjct: 275 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISI 309
>gi|195131533|ref|XP_002010205.1| GI15803 [Drosophila mojavensis]
gi|193908655|gb|EDW07522.1| GI15803 [Drosophila mojavensis]
Length = 596
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 89/391 (22%), Positives = 175/391 (44%), Gaps = 72/391 (18%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRI--GETVPGSEERVVTVYSASDE-TNAFEDGDKFVS 110
+G+IIGR G ++ + +++++ + E V GS E+ +T+Y + TNA
Sbjct: 87 VGAIIGRQGTTIRTITQQSRARVDVHRKENV-GSLEKSITIYGNPENCTNAC-------- 137
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ I E ++ + S ++ K+L ++ IG +IGK G ++ I +T
Sbjct: 138 -----------KRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTD 186
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS 230
+I + + S L + ++ + G L +N SR+++ +++ + S
Sbjct: 187 TKITVSSINDINSFNL--ERIITVKG---------------LIENMSRAENQISTKLRQS 229
Query: 231 HSSSGSLVGPTAATPIVGIAPLM---GPYGGYKGDTAGDW----SRSLYSAPR------- 276
+ + + P + G+ P+ P G +T+ + S ++ P
Sbjct: 230 YENDLQAMAPQSLM-FPGLHPMAMMSTPGNGMVFNTSMPFPSCQSFAMSKTPASVVPPAF 288
Query: 277 -DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+D+ F L P +G +IG G+ I I + S A++K+ + + D L +
Sbjct: 289 PNDMQETTF---LYIPNNAVGAIIGTKGSHIRSIMRFSSASLKI--APLDADKPLDQQTE 343
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL------ISFTTRLLVPTSRIGCLIGKGG 389
++ T+ T E + Q EK+ R+ G + T LLV +S++G +IGKGG
Sbjct: 344 RKV---TIVGTPEGQWKAQYMIFEKM-REEGFMCGTDDVRLTVELLVASSQVGRIIGKGG 399
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDE 420
+ E++R+T + I+ LP+ L + D+E
Sbjct: 400 QNVRELQRVTGSVIK-LPEHALAPPSGGDEE 429
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 81/182 (44%), Gaps = 23/182 (12%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-----ETVPGSEERVVTVYSA 95
++T + Y+ P +G+IIG G ++ + + + ++I + + ER VT+
Sbjct: 293 QETTFLYI-PNNAVGAIIGTKGSHIRSIMRFSSASLKIAPLDADKPLDQQTERKVTIVGT 351
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+ A + + +++ E D ++T +LLV S Q+G +I
Sbjct: 352 PEG-------------QWKAQYMIFEKMREEGFMCGTDD---VRLTVELLVASSQVGRII 395
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI-ASRLHD 214
GKGGQ V+ ++ TG+ I++ + P + V I G V+ A +I A L
Sbjct: 396 GKGGQNVRELQRVTGSVIKLPEHALAPPSGGDEETPVHIIGPFYSVQSAQRRIRAMMLST 455
Query: 215 NP 216
NP
Sbjct: 456 NP 457
>gi|189238821|ref|XP_968538.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k
[Tribolium castaneum]
gi|270010156|gb|EFA06604.1| hypothetical protein TcasGA2_TC009519 [Tribolium castaneum]
Length = 414
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 88/175 (50%), Gaps = 24/175 (13%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D R L P + GSIIG+GG+ + +LR K+ I + + PG E R++T+ S
Sbjct: 20 DEEVRLLIPSKVAGSIIGKGGQNITKLRSQYKASITVPD-CPGPE-RMLTLSS------- 70
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
D D + D + + EE G + G+++ ++++ Q GCVIGK G
Sbjct: 71 --DLDTICNIVTDVVPNL------EENGGRVN---GNELDLRMMIHQSQAGCVIGKAGYK 119
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
++ +R +TGA+I+I + +D ++QI GE S ++ +I + + NP
Sbjct: 120 IKELREKTGARIKIFSN----VAPQSTDRIIQIVGEPSKCVDSIREIITLIKSNP 170
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 89/174 (51%), Gaps = 17/174 (9%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
+RL+ P G +IGKGG I ++R + A+I V G + ++T+SS DT+
Sbjct: 23 VRLLIPSKVAGSIIGKGGQNITKLRSQYKASITV--PDCPGPERMLTLSSDL---DTICN 77
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ VV P E R +G R+++ S+ GC+IGK G I E+R T A I+I
Sbjct: 78 IVTDVV---PNLEENGGRVNGN-ELDLRMMIHQSQAGCVIGKAGYKIKELREKTGARIKI 133
Query: 406 LPKENLPKIASED-DEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVP 458
+A + D ++QI G+ D++ +++T +++N +G V+ + P
Sbjct: 134 -----FSNVAPQSTDRIIQIVGEPSKCVDSIREIITLIKSNPI--KGIVNPYDP 180
>gi|403256748|ref|XP_003921014.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3 [Saimiri boliviensis boliviensis]
Length = 611
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 133/291 (45%), Gaps = 45/291 (15%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
+ P + +G IIGRGGE + +++ ++ KI+I G ER V + + E+
Sbjct: 184 FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPC-VLTGTPES------- 235
Query: 107 KFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ A+ L ++ DR D DS+ Q ++L+P+ ++G VIG+GG+ ++ +
Sbjct: 236 --IEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQ---EILIPASKVGLVIGRGGETIKQL 290
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR-LHD--NPSRSQHL 222
+ TG ++ +++D LP+ A D+ ++I+G+ V Q+ + HD +P R+ +
Sbjct: 291 QERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKV-----QVGKKPWHDGISPERAAQV 342
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY-----KGDTAGDWSRSLYSAPRD 277
+ H++ ++ A +GG +G GDWS ++
Sbjct: 343 MGPPDRCQHAAH-------IINELILTAQERDGFGGLAVARGRGRGRGDWSVGAPGGVQE 395
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P G VIGKGG I I Q+SGA +++ + D
Sbjct: 396 --------ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSD 438
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 12/149 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSKEF 338
++EF + P +G +IG+GG I++I+ ESG I++ +SS C++T + E
Sbjct: 181 TEEFKV----PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-GTPES 235
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
E + V R R D S +L+P S++G +IG+GG I +++
Sbjct: 236 IEQAKRLLGQIVDRC--RNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQER 293
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGD 427
T + ++ LP A D+ ++I+GD
Sbjct: 294 TGVKMVMIQDGPLPTGA---DKPLRITGD 319
>gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
gi|297318987|gb|EFH49409.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + + ++I++ E PG+ +R++ + + E
Sbjct: 35 THIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEV 94
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAK----LLVPSDQIGCVI 155
++ + L K+H + AE+ G++V + L+VP+ G +I
Sbjct: 95 ---------INGLELILDKLHSELHAED---------GNEVEPRRRIRLVVPNSSCGGII 136
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG +++ E+ A I+I ++ + SD LV +SG +A+ I ++L ++
Sbjct: 137 GKGGATIKSFIEESKAGIKISPLDN--TFYGLSDRLVTLSGTFEEQMRAIDLILAKLTED 194
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
SQ+ + + +S +G P P + G + A + S Y
Sbjct: 195 DHYSQN-----VHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNH 249
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+D+ S+ ++ + +IG V+G+GG I +I Q +GA IK+
Sbjct: 250 KDEAST---TVTIGVADEHIGLVLGRGGRNIMEITQITGARIKI 290
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
D + K +R + A G VIGKGG+ I + + +SGA I++ + +E
Sbjct: 29 DSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRN-------------QE 75
Query: 338 FFEDT------LSATIEAVVR-----LQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCL 384
FF T +S +I+ V+ L SE D + RL+VP S G +
Sbjct: 76 FFPGTTDRIIMISGSIKEVINGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGI 135
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
IGKGG+ I +KA I+I P +N D +V +SG + A+ ++ +L
Sbjct: 136 IGKGGATIKSFIEESKAGIKISPLDN--TFYGLSDRLVTLSGTFEEQMRAIDLILAKL 191
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 2/115 (1%)
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
E E +A+ E + + P + E DS R LV + G +IGKGGS ITE +
Sbjct: 2 ESTESYAAASPEELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQ 61
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREG 451
K+ RI N D ++ ISG + + L ++ +L + L +G
Sbjct: 62 --AKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVINGLELILDKLHSELHAEDG 114
>gi|257205944|emb|CAX82623.1| putative KH-type splicing regulatory protein [Schistosoma
japonicum]
Length = 513
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 22/188 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ +
Sbjct: 72 GPRVVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQ 129
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGK 157
+ A+ + + +R + G T +++VP + G VIGK
Sbjct: 130 ----------IDHAKQMIGDIIERAGKNGTPTTTTYNSTGSITTIEMMVPGLKAGLVIGK 179
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLH 213
G+ ++N++ E G ++ +++ + P+ D+ ++ISGE S V+KA L I SR
Sbjct: 180 NGETIKNLQEENGVKMVLIQQSNNPT---PEDKPLRISGEPSRVEKARQAVLVLINSR-- 234
Query: 214 DNPSRSQH 221
D P S H
Sbjct: 235 DRPGGSIH 242
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 162 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPTP-- 206
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 207 EDKPLRISGEPSRVEKARQAVLV--LINSRDRPGGSIHYGYDGQETSQYAVPAEKAGLVI 264
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
GKGG+ ++ I +GA + I K E P +++ + + G +++A+ I+ R
Sbjct: 265 GKGGESIKEICRVSGAHVEISK-EPPPDPSIK---IFNVRGNRQEIEQAIRMISER 316
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFED 341
++ ++ P G VIGK G I +++E+G I+ ++ T D L E
Sbjct: 163 TIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPSRVEK 222
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISF------TTRLLVPTSRIGCLIGKGGSIITEM 395
A + V + R +R G I + T++ VP + G +IGKGG I E+
Sbjct: 223 ARQAVL---VLINSR-----DRPGGSIHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEI 274
Query: 396 RRLTKANIRI 405
R++ A++ I
Sbjct: 275 CRVSGAHVEI 284
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G VIGKGG I Q++ ++ +++ + T +T + ++ D I ++
Sbjct: 87 VGLVIGKGGEQITQLQNDTQCKVQISQAGTPERTVTLTGTPQQI--DHAKQMIGDIIERA 144
Query: 355 PRCSEKIE---RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENL 411
+ +G I+ T ++VP + G +IGK G I ++ + ++ + N
Sbjct: 145 GKNGTPTTTTYNSTGSIT-TIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNN 203
Query: 412 PKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREG 451
P + +D+ ++ISG+ + A V+ + N DR G
Sbjct: 204 P---TPEDKPLRISGEPSRVEKARQAVLVLI--NSRDRPG 238
>gi|68475799|ref|XP_718106.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|68475932|ref|XP_718039.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439785|gb|EAK99099.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439861|gb|EAK99174.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|238882982|gb|EEQ46620.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 529
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/357 (21%), Positives = 131/357 (36%), Gaps = 57/357 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R CP+++ +I+GR GE + LR +I + E + G ER+V V
Sbjct: 163 RMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVK------------ 210
Query: 106 DKFVSPAQDA--LFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
PA++ F + RVI EE + S Q KLL+P IG +IGK G +
Sbjct: 211 ----GPAENVARAFGLITRVILEEPEDEPASINSQQYNLKLLIPHPMIGFIIGKQGLKFR 266
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL--HDNPSRSQH 221
I + A+++ ++ + +D ++ + G + A+ IA + H +
Sbjct: 267 EIEENSAAKLKAAEN----ALPYSTDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKHK 322
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
++ +N + SL G P M GY+ P+ S
Sbjct: 323 VVLYNPANYQPTDQSLGGRQRQPPSNSYNNPM----GYQAKLP-----PFSKPPQHQQSP 373
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE--GDDCLITVSSKEFF 339
FS+ V Q G+ + + ++ G + + + F
Sbjct: 374 YNFSMMFQPAVQ----------------PQHFGSPVTSNPNAVSPVGMQPSVNIPPQNQF 417
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
D TI V P +G + + V S IG +IGK G+ I +R
Sbjct: 418 TDEFGNTIVGEVITTPPIQ------AGQDKYNQDVFVANSSIGSVIGKRGNNIKHIR 468
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 60/132 (45%), Gaps = 11/132 (8%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
RDD + LR+ CPV ++G+ G IN +R+++ I V + + ++ V
Sbjct: 154 RDDPTF--IQLRMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVKG 211
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGCLIGKGGSII 392
+ ++ + R+ E+ E + I+ + +LL+P IG +IGK G
Sbjct: 212 P---AENVARAFGLITRV---ILEEPEDEPASINSQQYNLKLLIPHPMIGFIIGKQGLKF 265
Query: 393 TEMRRLTKANIR 404
E+ + A ++
Sbjct: 266 REIEENSAAKLK 277
>gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 334
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 133/284 (46%), Gaps = 35/284 (12%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSASDET 99
T R+L GS+IG+GG + + + + ++I++ E PG+ +R++ + + E
Sbjct: 35 THIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEV 94
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAK----LLVPSDQIGCVI 155
V+ + L K+H + AE+ G++V + L+VP+ G +I
Sbjct: 95 ---------VNGLELILDKLHSELHAED---------GNEVEPRRRIRLVVPNSSCGGII 136
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
GKGG +++ E+ A I+I ++ + SD LV +SG +A+ I ++L ++
Sbjct: 137 GKGGATIKSFIEESKAGIKISPLDN--TFYGLSDRLVTLSGTFEEQMRAIDLILAKLTED 194
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
SQ+ + + +S +G P P + G + A + S Y
Sbjct: 195 DHYSQN-----VHSPYSYAGLFYSGFHGPPYAYALPSVATAGYNSVNYAPNGSGGKYQNH 249
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+++ S+ ++ + +IG V+G+GG I +I Q +GA IK+
Sbjct: 250 KEEAST---TVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKI 290
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 80/178 (44%), Gaps = 28/178 (15%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
D + K +R + A G VIGKGG+ I + + +SGA I++ + +E
Sbjct: 29 DSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRN-------------QE 75
Query: 338 FFEDT------LSATIEAVVR-----LQPRCSEKIERDSGLIS--FTTRLLVPTSRIGCL 384
FF T +S +I+ VV L SE D + RL+VP S G +
Sbjct: 76 FFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDGNEVEPRRRIRLVVPNSSCGGI 135
Query: 385 IGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
IGKGG+ I +KA I+I P +N D +V +SG + A+ ++ +L
Sbjct: 136 IGKGGATIKSFIEESKAGIKISPLDN--TFYGLSDRLVTLSGTFEEQMRAIDLILAKL 191
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 2/104 (1%)
Query: 348 EAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
E + + P + E DS R LV + G +IGKGGS ITE + K+ RI
Sbjct: 13 EELAKRSPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQ--AKSGARIQL 70
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREG 451
N D ++ ISG + + L ++ +L + L +G
Sbjct: 71 SRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAEDG 114
>gi|410951301|ref|XP_003982336.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Felis catus]
Length = 360
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 77/289 (26%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
GG ++S +LRLV P + G +IGK G I +IR
Sbjct: 94 ------GG-------------------NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QES--GAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQ-------PRCS 358
+ GA I S + G + +S+ + F + T V +LQ P S
Sbjct: 129 ESPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFAS 185
Query: 359 EKIER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 186 PSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 124/293 (42%), Gaps = 66/293 (22%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSET--GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
IR GA I L + L +++ + G+ V A ++ Q
Sbjct: 126 EIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEV----------TKLQQ 175
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
L A+ + +P M P G P SS
Sbjct: 176 LSGHAVPFA-------------------SPSMVP--GLD--------------PGTQTSS 200
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 201 QEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 249
>gi|383863655|ref|XP_003707295.1| PREDICTED: RNA-binding protein Nova-2-like isoform 2 [Megachile
rotundata]
Length = 535
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 101/222 (45%), Gaps = 27/222 (12%)
Query: 6 NSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIV 65
N KRSH + + KR D + G + L P G+IIG+GG+ +
Sbjct: 29 NGATKRSHYGSGKSLCYLRKRELERDTCNGVFHGDGTYHLKVLVPGVAAGAIIGKGGDTI 88
Query: 66 KQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDR 122
QL+ DT +K++I ++ PG+ ERV + + + A D F+ D + + D
Sbjct: 89 AQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAIMAVMD---FI---MDKIREKPDL 142
Query: 123 VIAEELRGDEDSDGGHQVT-----AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI-- 175
L+ DS+ G K+LVP+ G +IGK G ++ I+ E+G+ ++I
Sbjct: 143 T----LKTTVDSESGKTTAERDKQVKILVPNSTAGMIIGKAGNYIKQIKEESGSYVQISQ 198
Query: 176 -LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KD L + + + GE + AL I +++ D+P
Sbjct: 199 KAKDVSL------QERCITVIGEKENNRNALMMILAKVADDP 234
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 84/170 (49%), Gaps = 16/170 (9%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEF 338
+ L+++ P G +IGKGG I Q+++++GA +K+ S T CLIT S +
Sbjct: 66 YHLKVLVPGVAAGAIIGKGGDTIAQLQKDTGAKVKISKSHDFYPGTTERVCLITGSLEAI 125
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFT------TRLLVPTSRIGCLIGKGGSII 392
+ I +R +P + K DS T ++LVP S G +IGK G+ I
Sbjct: 126 M--AVMDFIMDKIREKPDLTLKTTVDSESGKTTAERDKQVKILVPNSTAGMIIGKAGNYI 183
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+++ + + ++I K K S + + + G+ + ++AL+ ++ ++
Sbjct: 184 KQIKEESGSYVQISQKA---KDVSLQERCITVIGEKENNRNALMMILAKV 230
>gi|444727083|gb|ELW67590.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Tupaia
chinensis]
Length = 644
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 128/283 (45%), Gaps = 39/283 (13%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 261 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 320
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + +D ++ K+L ++ +G +IGK
Sbjct: 321 TSA----------ACKSILEIM-------YKEAQDIKFTEEIPLKILAHNNFVGRLIGKE 363
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 364 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 421
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ GI P T+G S P
Sbjct: 422 DIASMNLQAHLIPGLNLNALGLFPPTS-----GIPP----------PTSGPPSAMTPPYP 466
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK
Sbjct: 467 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIK 508
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 78/167 (46%), Gaps = 19/167 (11%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG--DDCLITVSSKEFFE 340
+ LRL+ P +G +IGK GA I I +++ + I V G + + +S+ E
Sbjct: 263 DLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPE--- 319
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT----TRLLVPTSRIGCLIGKGGSIITEMR 396
SA ++++ E + +++ I FT ++L + +G LIGK G + ++
Sbjct: 320 -GTSAACKSIL-------EIMYKEAQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIE 371
Query: 397 RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+ T I I P + L E + + G+++ A ++M ++R
Sbjct: 372 QDTDTKITISPLQELTLYNPE--RTITVKGNVETCAKAEEEIMKKIR 416
>gi|41053065|dbj|BAD08009.1| putative KH domain protein [Oryza sativa Japonica Group]
Length = 458
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 88/179 (49%), Gaps = 13/179 (7%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPG----------SEERV 89
P +V+R + K+G +IGR G+ +K+L DT++++R+ E S + +
Sbjct: 94 PGASVFRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVDSDSNDFI 153
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVI-AEELRGDEDSDGG--HQVTAKLLV 146
V +A E+ + PA DA K+ + E++ D+ G + +AKLLV
Sbjct: 154 AKVTFEMVLISATEESQAELPPAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCSAKLLV 213
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
PS Q +IGK G +++I+ TGA ++I+ L S + + +V I G V AL
Sbjct: 214 PSAQATHLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHAL 272
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 88/195 (45%), Gaps = 25/195 (12%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV-DSSSTEGDDCLITVSSKEF-----F 339
RLV +GG+IG+ G I ++ +++ A ++V ++++ + ++ S +F F
Sbjct: 99 FRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVDSDSNDFIAKVTF 158
Query: 340 EDTL-SATIEAVVRLQPRCS------------EKIERDSGLI-----SFTTRLLVPTSRI 381
E L SAT E+ L P EKI D L + +LLVP+++
Sbjct: 159 EMVLISATEESQAELPPAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCSAKLLVPSAQA 218
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR 441
LIGK G I ++ T A ++I+ K L D+ +V I G AL V+
Sbjct: 219 THLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGAPLKVLHALKSVLGV 278
Query: 442 LRANLFDREGAVSTF 456
LR L D G + F
Sbjct: 279 LRKFLVD-HGVLHLF 292
>gi|391348567|ref|XP_003748518.1| PREDICTED: poly(rC)-binding protein 3-like [Metaseiulus
occidentalis]
Length = 418
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ G+ +K+ R D+ +KI I + T P ER+VTV + T +
Sbjct: 21 KEVGSIIGKKGDNIKKFREDSGAKINISDGTCP---ERIVTV---TGSTECILKAFSLIC 74
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQ--VTAKLLVPSDQIGCVIGKGGQIVQNIRSE 168
+ + + L G + G VT +L+VP+ Q G +IGK G ++ IR
Sbjct: 75 AKFEEMSSLSGSPTESALNGQKVLPGQTPPPVTLRLIVPASQCGSLIGKAGSKIREIREI 134
Query: 169 TGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
TGA +++ E LP+ R+ V ++G A V K + QI + + P +
Sbjct: 135 TGASVQV-ASEMLPNSTERT---VTVAGTADAVTKCIYQICCVMLECPPK 180
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 12/169 (7%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+ S ++R++ +G +IGK G I + R++SGA I + + +T S++
Sbjct: 6 NTPSVTLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGTCPERIVTVTGSTEC 65
Query: 338 FFE--DTLSATIEAVVRLQPRCSE------KIERDSGLISFTTRLLVPTSRIGCLIGKGG 389
+ + A E + L +E K+ T RL+VP S+ G LIGK G
Sbjct: 66 ILKAFSLICAKFEEMSSLSGSPTESALNGQKVLPGQTPPPVTLRLIVPASQCGSLIGKAG 125
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
S I E+R +T A++++ E LP + + V ++G D + Q+
Sbjct: 126 SKIREIREITGASVQVA-SEMLP---NSTERTVTVAGTADAVTKCIYQI 170
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 50/182 (27%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T ++++ ++G +IGK G ++ R ++GA+I I D P + +V ++G
Sbjct: 12 LTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINI-SDGTCP------ERIVTVTGSTE 64
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I ++ + S S SA+ +G V P P V
Sbjct: 65 CILKAFSLICAKFEEMSSLSGSPTESAL------NGQKVLPGQTPPPV------------ 106
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+LRL+ P + G +IGK G+ I +IR+ +GA+++V
Sbjct: 107 -------------------------TLRLIVPASQCGSLIGKAGSKIREIREITGASVQV 141
Query: 320 DS 321
S
Sbjct: 142 AS 143
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 14/94 (14%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASV 200
T ++ +P+D IGCVIGKGGQ + IR +GA I+I E + V ISG
Sbjct: 306 TQEMQIPNDLIGCVIGKGGQKINEIRQLSGATIKISSTEE-----GSKERCVSISGTPEA 360
Query: 201 VKKALCQI---------ASRLHDNPSRSQHLLAS 225
+ A I ASRL N R + AS
Sbjct: 361 INLAQYLINTRQVSLRKASRLQSNHRRDPSVSAS 394
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 7/67 (10%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK-------EFFEDTLSATI 347
IG VIGKGG IN+IRQ SGA IK+ S+ + +++S ++ +T ++
Sbjct: 316 IGCVIGKGGQKINEIRQLSGATIKISSTEEGSKERCVSISGTPEAINLAQYLINTRQVSL 375
Query: 348 EAVVRLQ 354
RLQ
Sbjct: 376 RKASRLQ 382
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASD 97
P R + P + GS+IG+ G ++++R T + +++ E +P S ER VTV +D
Sbjct: 103 PPPVTLRLIVPASQCGSLIGKAGSKIREIREITGASVQVASEMLPNSTERTVTVAGTAD 161
Score = 39.7 bits (91), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 369 SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S T + +P IGC+IGKGG I E+R+L+ A I+I
Sbjct: 304 SSTQEMQIPNDLIGCVIGKGGQKINEIRQLSGATIKI 340
>gi|257206622|emb|CAX82939.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 22/188 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ +
Sbjct: 94 GPRVVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQ 151
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGK 157
+ A+ + + +R + G T +++VP + G VIGK
Sbjct: 152 ----------IDHAKQMIGDIIERAGKNGTPTTTTYNSTGSITTIEMMVPGLKAGLVIGK 201
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLH 213
G+ ++N++ E G ++ +++ + P+ D+ ++ISGE S V+KA L I SR
Sbjct: 202 NGETIKNLQEENGVKMVLIQQSNNPT---PEDKPLRISGEPSRVEKARQAVLVLINSR-- 256
Query: 214 DNPSRSQH 221
D P S H
Sbjct: 257 DRPGGSIH 264
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 184 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPTP-- 228
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 229 EDKPLRISGEPSRVEKARQAVLV--LINSRDRPGGSIHYGYDGQETSQYAVPAEKAGLVI 286
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
GKGG+ ++ I +GA + I K E P +++ + + G +++A+ I+ R
Sbjct: 287 GKGGESIKEICRVSGAHVEISK-EPPPDPSIK---IFNVRGNRQEIEQAIRMISER 338
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFED 341
++ ++ P G VIGK G I +++E+G I+ ++ T D L E
Sbjct: 185 TIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPSRVEK 244
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISF------TTRLLVPTSRIGCLIGKGGSIITEM 395
A + V + R +R G I + T++ VP + G +IGKGG I E+
Sbjct: 245 ARQAVL---VLINSR-----DRPGGSIHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEI 296
Query: 396 RRLTKANIRI 405
R++ A++ I
Sbjct: 297 CRVSGAHVEI 306
Score = 38.9 bits (89), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G VIGKGG I Q++ ++ +++ + T +T + ++ D I ++
Sbjct: 109 VGLVIGKGGEQITQLQNDTQCKVQISQAGTPERTVTLTGTPQQI--DHAKQMIGDIIERA 166
Query: 355 PRCSEKIE---RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENL 411
+ +G I+ T ++VP + G +IGK G I ++ + ++ + N
Sbjct: 167 GKNGTPTTTTYNSTGSIT-TIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNN 225
Query: 412 PKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREG 451
P + +D+ ++ISG+ + A V+ + N DR G
Sbjct: 226 P---TPEDKPLRISGEPSRVEKARQAVLVLI--NSRDRPG 260
>gi|402594179|gb|EJW88105.1| KH domain-containing protein [Wuchereria bancrofti]
Length = 581
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 152/372 (40%), Gaps = 79/372 (21%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQ 113
+G++IGRGGE + Q++ T ++++ G+ R T+ + D+ +
Sbjct: 46 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSV------DRARAMIN 99
Query: 114 DALFKVHDRVI---AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + + +R A G G Q+T ++ +P + G VIGKGG+ ++NI+ +TG
Sbjct: 100 EVIARAGNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTG 159
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS 230
++ ++++ + ++I+G+ V+ A + L SR H
Sbjct: 160 VKMVMIQENQESGGQPKP---LRITGDPEKVENARRMVEEILQ---SREDH--------- 204
Query: 231 HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVC 290
P + G G + G S PR
Sbjct: 205 -------------------PPGHFGFPGSFGISGGQRSIGEVIVPR-------------- 231
Query: 291 PVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLITVSSKEFFEDTLSATIE 348
A++G +IGKGG I ++ ESGA I K D T + C + + T E
Sbjct: 232 --ASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTAQERCAV-----------IQGTAE 278
Query: 349 AVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ + SE +++ G F + VP+++ G +IGKGG I ++ + A++ +
Sbjct: 279 QIAKATQFISELVKKSGAAGGAEMF--YMHVPSNKTGLVIGKGGETIKQICAESGAHVEL 336
Query: 406 LPKENLPKIASE 417
+ P ASE
Sbjct: 337 --SRDPPPNASE 346
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 20 DHGPNKRRYTGDDRDQF-IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
DH P + G F I G + ++ + P +G IIG+GGE +K+L ++ +KI+
Sbjct: 203 DHPPGHFGFPGS----FGISGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKIQF 258
Query: 79 G-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG 137
+ ++ER + +++ +F+S EL + GG
Sbjct: 259 KPDDDQTAQERCAVIQGTAEQ---IAKATQFIS----------------ELVKKSGAAGG 299
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
++ + VPS++ G VIGKGG+ ++ I +E+GA + + +D
Sbjct: 300 AEMF-YMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRD 339
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL- 353
+G VIG+GG I+QI+ ++ +++ S + T+ + D A I V+
Sbjct: 46 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 105
Query: 354 --QPRCSEKIERDSGLI-----SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+P + D G+ T + +P ++ G +IGKGG I ++ T + ++
Sbjct: 106 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKM-VM 164
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDA 434
+EN + + + ++I+GD + ++A
Sbjct: 165 IQEN--QESGGQPKPLRITGDPEKVENA 190
>gi|169617928|ref|XP_001802378.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
gi|111059439|gb|EAT80559.1| hypothetical protein SNOG_12147 [Phaeosphaeria nodorum SN15]
Length = 485
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 136/345 (39%), Gaps = 81/345 (23%)
Query: 56 SIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA 115
+IIG+GGE V Q+R + +K + + G+ ER++TV D A
Sbjct: 140 TIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVD--------------AVSK 185
Query: 116 LFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
F + R + +E + +LL+P IG +IGK G ++ I+ + A++
Sbjct: 186 AFGLIVRTLNQEDLEAPSTSTSKAYPMRLLIPHILIGSIIGKAGVRIREIQEASNAKLN- 244
Query: 176 LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------PSRSQHLLASAIS 228
D LP+ RS LV + G A V A+ +A L + P+ SQ+ S ++
Sbjct: 245 ASDTLLPNSGERS--LV-VLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 301
Query: 229 NSHSSSGSLVGPTAATPI-----------------------VGIAPLM--------GPYG 257
+ G V P P G AP M PYG
Sbjct: 302 ANVVPGGMSVQPYVPQPAGGQYQQPNNFRRQEPQRTPAHGGYGAAPHMQPGAPVHPSPYG 361
Query: 258 GYKGDT-AGDWSRSLYSAPRDD------------------------LSSKEFSLRLVCPV 292
+ AG R+ Y P + + + ++ P
Sbjct: 362 QPQMPYGAGSPGRAHYGGPPQQPGPYGAPQGAPVPHGGPPNQPPVSMPGQPLTQQIFIPN 421
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+G +IGKGGA IN+IRQ SG+ IK++ + ++ L+T++ +
Sbjct: 422 DMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQ 466
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 118/297 (39%), Gaps = 40/297 (13%)
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
T+G R L + + D + LR + +IGKGG + QIR+ SGA V
Sbjct: 107 TSGANGRPLSHSQQVD-ETNWLHLRACIGTSEAATIIGKGGENVTQIRRLSGAKCTVSDY 165
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS--FTTRLLVPTSR 380
S + ++TVS + D +S +VR E +E S S + RLL+P
Sbjct: 166 SRGAVERILTVSGQ---VDAVSKAFGLIVRT--LNQEDLEAPSTSTSKAYPMRLLIPHIL 220
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
IG +IGK G I E++ + A + LP ++ ++ + +A + Q +
Sbjct: 221 IGSIIGKAGVRIREIQEASNAKLNAS-DTLLPNSGERSLVVLGVADAVHIAVYYVAQTLV 279
Query: 441 RLRANLF---------DREGAVSTFVP----VLPYIPVSENGSDGLNYESRDSKRH---G 484
F R G + VP V PY+P G Y+ ++ R
Sbjct: 280 EQLTERFGGPAASQYATRSGMAANVVPGGMSVQPYVPQPAGG----QYQQPNNFRRQEPQ 335
Query: 485 RGPPYGGYGSS---DLAAGDSYGSYGSSQLGGTGSAYGSYGSYSSGRSGSGLSSHAP 538
R P +GGYG++ A YG Q+ YG+ S GR+ G P
Sbjct: 336 RTPAHGGYGAAPHMQPGAPVHPSPYGQPQM--------PYGAGSPGRAHYGGPPQQP 384
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G +T ++ +P+D +G +IGKGG + IR +G+ I+I + ++ LV I+G
Sbjct: 410 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINE-----PTDNSNERLVTITG 464
Query: 197 EASVVKKALCQIASRLHDNP 216
+ AL + SRL + P
Sbjct: 465 TQECNQMALYMLYSRLGEGP 484
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
T ++ +P +G +IGKGG+ I E+R+L+ + I+I N P S ++ +V I+G +
Sbjct: 413 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKI----NEPTDNS-NERLVTITGTQE 467
Query: 430 LAKDALIQVMTRL 442
+ AL + +RL
Sbjct: 468 CNQMALYMLYSRL 480
>gi|301767224|ref|XP_002919001.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Ailuropoda
melanoleuca]
Length = 360
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 125/289 (43%), Gaps = 77/289 (26%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
GG ++S +LRLV P + G +IGK G I +IR
Sbjct: 94 ------GG-------------------NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QES--GAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQ-------PRCS 358
+ GA I S + G + +S+ + F + T V +LQ P S
Sbjct: 129 ESPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFAS 185
Query: 359 EKIER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 186 PSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 66/293 (22%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSET--GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
IR GA I L + L +++ + G+ V A ++ Q
Sbjct: 126 EIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEV----------TKLQQ 175
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
L A+ + S + P A T SS
Sbjct: 176 LSGHAVPFASPSMVPGLDPGAQT-----------------------------------SS 200
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 201 QEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 249
>gi|226477992|emb|CAX72689.1| KH-type splicing regulatory protein (FUSE binding protein 2)
[Schistosoma japonicum]
Length = 535
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 22/188 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ +
Sbjct: 94 GPRVVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQ 151
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDG-GHQVTAKLLVPSDQIGCVIGK 157
+ A+ + + +R + G T +++VP + G VIGK
Sbjct: 152 ----------IDHAKQMIGDIIERAGKNGTPTTTTYNSTGSITTIEMMVPGLKAGLVIGK 201
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLH 213
G+ ++N++ E G ++ +++ + P+ D+ ++ISGE S V+KA L I SR
Sbjct: 202 NGETIKNLQEENGVKMVLIQQSNNPT---PEDKPLRISGEPSRVEKARQAVLVLINSR-- 256
Query: 214 DNPSRSQH 221
D P S H
Sbjct: 257 DRPGGSIH 264
Score = 42.7 bits (99), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 184 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPTP-- 228
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 229 EDKPLRISGEPSRVEKARQAVLV--LINSRDRPGGSIHYGYDGQETSQYAVPAEKAGLVI 286
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
GKGG+ ++ I +GA + I K E P +++ + + G +++A+ I+ R
Sbjct: 287 GKGGESIKEICRVSGAHVEISK-EPPPDPSIK---IFNVRGNRQEIEQAIRMISER 338
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 17/130 (13%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFED 341
++ ++ P G VIGK G I +++E+G I+ ++ T D L E
Sbjct: 185 TIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNNPTPEDKPLRISGEPSRVEK 244
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISF------TTRLLVPTSRIGCLIGKGGSIITEM 395
A + V + R +R G I + T++ VP + G +IGKGG I E+
Sbjct: 245 ARQAVL---VLINSR-----DRPGGSIHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEI 296
Query: 396 RRLTKANIRI 405
R++ A++ I
Sbjct: 297 CRVSGAHVEI 306
Score = 38.5 bits (88), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 73/160 (45%), Gaps = 11/160 (6%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G VIGKGG I Q++ ++ +++ + T +T + ++ D I ++
Sbjct: 109 VGLVIGKGGEQITQLQNDTQCKVQISQAGTPERTVTLTGTPQQI--DHAKQMIGDIIERA 166
Query: 355 PRCSEKIE---RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENL 411
+ +G I+ T ++VP + G +IGK G I ++ + ++ + N
Sbjct: 167 GKNGTPTTTTYNSTGSIT-TIEMMVPGLKAGLVIGKNGETIKNLQEENGVKMVLIQQSNN 225
Query: 412 PKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREG 451
P + +D+ ++ISG+ + A V+ + N DR G
Sbjct: 226 P---TPEDKPLRISGEPSRVEKARQAVLVLI--NSRDRPG 260
>gi|390177062|ref|XP_003736268.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858892|gb|EIM52341.1| GA30025, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 714
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 101/229 (44%), Gaps = 46/229 (20%)
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
P G YK TA W + ++++ P G +IGKGG I +++++G
Sbjct: 225 PLGNYK--TASCWC----------YGETTYHMKILVPAVASGAIIGKGGETIASLQKDTG 272
Query: 315 AAIKVDSSS-----TEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI-------- 361
A +K+ S T CLIT S++ + I +R +P + KI
Sbjct: 273 ARVKMSKSHDFYPGTTERVCLITGSTEAIM--VVLDFIMDKIREKPDLTTKIIDAESKQT 330
Query: 362 -ERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE 420
ERD + ++LVP S G +IGKGG+ I +++ + + ++I K PK S +
Sbjct: 331 QERDKQV-----KILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQK---PKDVSLQER 382
Query: 421 MVQISGDLDLAKDALIQVMTR----------LRANLFDREGAVSTFVPV 459
+ I GD + K+A ++++ L + D G V+ F P
Sbjct: 383 CITIIGDKENNKNACKMILSKIVEDPQSGTCLNVSYADVSGPVANFNPT 431
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 91/180 (50%), Gaps = 15/180 (8%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
+T Y + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV + ++
Sbjct: 239 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 298
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+ D F+ + ++I E + ++ D QV K+LVP+ G +IG
Sbjct: 299 EAIMVVLD---FIMDKIREKPDLTTKIIDAESKQTQERD--KQV--KILVPNSTAGMIIG 351
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ I+ ++G+ ++I + P + + I G+ K A I S++ ++P
Sbjct: 352 KGGAFIKQIKEDSGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDP 408
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K P R + I+G +
Sbjct: 245 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSTEAI 301
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
L I ++ + P
Sbjct: 302 MVVLDFIMDKIREKP--------------------------------------------- 316
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + A ++ ++++ P + G +IGKGGA I QI+++SG+ +++
Sbjct: 317 ----DLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEDSGSYVQISQ 372
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 373 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 406
>gi|154295229|ref|XP_001548051.1| conserved hypothetical protein [Botryotinia fuckeliana B05.10]
gi|347829292|emb|CCD44989.1| similar to KH domain RNA-binding protein [Botryotinia fuckeliana]
Length = 371
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 135/303 (44%), Gaps = 50/303 (16%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
R + ++ G IIG+GG+ V LR +T K + + V G +RV+T+ D +
Sbjct: 51 TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTISGGCDSIS--- 107
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
+ S AL + ++ + G ++G H + KLL+ +Q+G +IG+ G ++
Sbjct: 108 ---RAYSIVAKALLEGAPQM---GMGGVVSNNGTHPI--KLLISHNQMGTIIGRQGLKIK 159
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS---- 219
+I+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ +R
Sbjct: 160 HIQDASGVRM-VAQKEMLPQSTER---IVEVQGNPEGIQKAIWEICKCLVDDWARGTGTV 215
Query: 220 --QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD 277
++ + NS S VG T YG + G+ + SAPR
Sbjct: 216 LYNPMVRTQTGNSGGMSQGNVGGTGRE-----------YGSSRVMRTGNGADFSESAPRS 264
Query: 278 -----------------DLSSKEFSLRLV-CPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D + +E + + P +G +IG+ G+ I++IR+ SGA I +
Sbjct: 265 YNRRSESDAAQRGPPTHDENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISI 324
Query: 320 DSS 322
S
Sbjct: 325 AKS 327
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
D +G T + +P+D +GC+IG+ G + IR +GA+I I K H
Sbjct: 282 DENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKSPH 329
>gi|170574714|ref|XP_001892930.1| KH domain containing protein [Brugia malayi]
gi|158601280|gb|EDP38236.1| KH domain containing protein [Brugia malayi]
Length = 614
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 83/372 (22%), Positives = 153/372 (41%), Gaps = 79/372 (21%)
Query: 54 IGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQ 113
+G++IGRGGE + Q++ T ++++ G+ R T+ + D+ +
Sbjct: 82 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNVRQCTLQGSKMSV------DRARAMIN 135
Query: 114 DALFKVHDRVI---AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
+ + + +R A G G Q+T ++ +P + G VIGKGG+ ++NI+ +TG
Sbjct: 136 EVIARAGNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTG 195
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNS 230
++ ++++ + ++I+G+ V+ A + L SR H
Sbjct: 196 VKMVMIQENQESGGQPKP---LRITGDPEKVENARRMVEEILQ---SREDH--------- 240
Query: 231 HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVC 290
P + G G + G S PR
Sbjct: 241 -------------------PPGHFGFPGSFGMSGGQRSIGEVIVPR-------------- 267
Query: 291 PVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLITVSSKEFFEDTLSATIE 348
A++G +IGKGG I ++ ESGA I K D+ T + C + + T E
Sbjct: 268 --ASVGMIIGKGGETIKRLAAESGAKIQFKPDNDQTAQERCAV-----------IQGTAE 314
Query: 349 AVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ + SE +++ G F + VP+++ G +IGKGG I ++ + A++ +
Sbjct: 315 QIAKATQFISELVKKSGAAGGAEMF--YMHVPSNKTGLVIGKGGETIKQICAESGAHVEL 372
Query: 406 LPKENLPKIASE 417
+ P ASE
Sbjct: 373 --SRDPPPNASE 382
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 20 DHGPNKRRYTGDDRDQF-IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
DH P + G F + G + ++ + P +G IIG+GGE +K+L ++ +KI+
Sbjct: 239 DHPPGHFGFPGS----FGMSGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKIQF 294
Query: 79 G-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG 137
+ ++ER + +++ +F+S EL + GG
Sbjct: 295 KPDNDQTAQERCAVIQGTAEQ---IAKATQFIS----------------ELVKKSGAAGG 335
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
++ + VPS++ G VIGKGG+ ++ I +E+GA + + +D
Sbjct: 336 AEMF-YMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRD 375
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL- 353
+G VIG+GG I+QI+ ++ +++ S + T+ + D A I V+
Sbjct: 82 LGNVIGRGGEQISQIQSQTNCRVQMSPESDGNNVRQCTLQGSKMSVDRARAMINEVIARA 141
Query: 354 --QPRCSEKIERDSGLI-----SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+P + D G+ T + +P ++ G +IGKGG I ++ T + ++
Sbjct: 142 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKM-VM 200
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDA 434
+EN + + + ++I+GD + ++A
Sbjct: 201 IQEN--QESGGQPKPLRITGDPEKVENA 226
>gi|409045569|gb|EKM55049.1| hypothetical protein PHACADRAFT_95060 [Phanerochaete carnosa
HHB-10118-sp]
Length = 409
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 122/264 (46%), Gaps = 38/264 (14%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+ G V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 124 IIGKAGTHVNEIREKSGARVMVSESIPGNPERILNVSGPLD--------------AVSKA 169
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 170 FGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLN-A 228
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD-NPSRSQHLLASAISNSHSSSG 235
+ LP ++ ++ +SG A + A I + L + N + +S +S S S
Sbjct: 229 SEGMLPGS---TERVLSVSGVADAIHIATYYIGNILIEANERMPSYQNSSYRPSSTSRSR 285
Query: 236 SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANI 295
+ ++ PI + L+ P+ G A ++ +Y +DL +
Sbjct: 286 APYQGSSYVPIGHASALLQPHAPPPG--AQLQTQQIYIP--NDL---------------V 326
Query: 296 GGVIGKGGAIINQIRQESGAAIKV 319
G +IGKGG+ IN+IR S + IK+
Sbjct: 327 GCIIGKGGSKINEIRHVSASQIKI 350
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 104/225 (46%), Gaps = 41/225 (18%)
Query: 26 RRYTGDDRDQ-FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVP 83
RR + D+ + G +++ P ++GS+IG+GG +K+++ + +++ E +P
Sbjct: 175 RRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLP 234
Query: 84 GSEERVVTVYSASDET--------NAFEDGDKFVSPAQDALFKV---------------- 119
GS ERV++V +D N + ++ + Q++ ++
Sbjct: 235 GSTERVLSVSGVADAIHIATYYIGNILIEANERMPSYQNSSYRPSSTSRSRAPYQGSSYV 294
Query: 120 ---HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
H + L+ G T ++ +P+D +GC+IGKGG + IR + +QI+I+
Sbjct: 295 PIGHASAL---LQPHAPPPGAQLQTQQIYIPNDLVGCIIGKGGSKINEIRHVSASQIKIM 351
Query: 177 KD---------EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+ + P+ A + LV I+G + ++ A+ + SRL
Sbjct: 352 EPGAVGVGMNGQPAPAAAHEGERLVVITGAPNNIQIAVQLLYSRL 396
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 51/210 (24%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVS----- 334
S+ +++ + P + +G VIGKGGA I +I+ SGA + G + +++VS
Sbjct: 190 SRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARLNASEGMLPGSTERVLSVSGVADA 249
Query: 335 ---SKEFFEDTLSATIEAVVRL--------QPRCSEK------------IERDSGLIS-- 369
+ + + L IEA R+ +P + + I S L+
Sbjct: 250 IHIATYYIGNIL---IEANERMPSYQNSSYRPSSTSRSRAPYQGSSYVPIGHASALLQPH 306
Query: 370 --------FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK---------ENLP 412
T ++ +P +GC+IGKGGS I E+R ++ + I+I+ + P
Sbjct: 307 APPPGAQLQTQQIYIPNDLVGCIIGKGGSKINEIRHVSASQIKIMEPGAVGVGMNGQPAP 366
Query: 413 KIASEDDEMVQISGDLDLAKDALIQVMTRL 442
A E + +V I+G + + A+ + +RL
Sbjct: 367 AAAHEGERLVVITGAPNNIQIAVQLLYSRL 396
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 60/109 (55%), Gaps = 9/109 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGK G +N+IR++SGA + V S + ++ VS D +S +VR R
Sbjct: 124 IIGKAGTHVNEIREKSGARVMVSESIPGNPERILNVSGP---LDAVSKAFGLIVR---RI 177
Query: 358 S-EKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ E ++ S G + T + ++P SR+G +IGKGG+ I E++ + A +
Sbjct: 178 NDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGAKIKEIQDASGARL 226
>gi|443926268|gb|ELU44971.1| cytoplasmic protein [Rhizoctonia solani AG-1 IA]
Length = 389
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 117/270 (43%), Gaps = 35/270 (12%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+ G+ V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 83 IIGKAGKHVNEIREKSGARVMVSESIPGNPERILNVSGPLD--------------AVSKS 128
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P ++G VIG+GG ++ I+ +GA++
Sbjct: 129 FGLIVRRINDEPFDTPSVPGSRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGAKLN-A 187
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP R ++ +SG A + A + + L+ +A HSSS S
Sbjct: 188 SEGMLPGSTER---ILSVSGVADAIHIATYYVGNI----------LIEAAERQPHSSSTS 234
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
P+ + P P Y G + P +++ + P +G
Sbjct: 235 TYRPSGTS---SRGPRYAPTPTYSGYYGYPPPPAPAPYPPGPPQTQQIYI----PNDLVG 287
Query: 297 GVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
+IGKGG+ IN+IR S + I++ +G
Sbjct: 288 CIIGKGGSKINEIRSLSASQIRIMEPGVQG 317
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 93/202 (46%), Gaps = 36/202 (17%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSA 95
+ G +++ P ++GS+IGRGG +K+++ + +K+ E +PGS ER+++V
Sbjct: 146 VPGSRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGAKLNASEGMLPGSTERILSVSGV 205
Query: 96 SDETN--AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQV------------- 140
+D + + G+ + A+ + H + S G
Sbjct: 206 ADAIHIATYYVGNILIEAAER---QPHSSSTSTYRPSGTSSRGPRYAPTPTYSGYYGYPP 262
Query: 141 -------------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD--EHLPSCA 185
T ++ +P+D +GC+IGKGG + IRS + +QIRI++ + P A
Sbjct: 263 PPAPAPYPPGPPQTQQIYIPNDLVGCIIGKGGSKINEIRSLSASQIRIMEPGVQGPPGTA 322
Query: 186 L--RSDELVQISGEASVVKKAL 205
++ LV I+G+ ++ A+
Sbjct: 323 QGNPNERLVIITGQPQNIQMAV 344
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 92/214 (42%), Gaps = 50/214 (23%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-DCLITVS----- 334
S+ +++ + P + +G VIG+GG+ I +I+ SGA + G + +++VS
Sbjct: 149 SRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDASGAKLNASEGMLPGSTERILSVSGVADA 208
Query: 335 ---SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISF--------------------- 370
+ + + L IEA R S R SG S
Sbjct: 209 IHIATYYVGNIL---IEAAERQPHSSSTSTYRPSGTSSRGPRYAPTPTYSGYYGYPPPPA 265
Query: 371 ----------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK--ENLPKIA--S 416
T ++ +P +GC+IGKGGS I E+R L+ + IRI+ + P A +
Sbjct: 266 PAPYPPGPPQTQQIYIPNDLVGCIIGKGGSKINEIRSLSASQIRIMEPGVQGPPGTAQGN 325
Query: 417 EDDEMVQISG---DLDLAKDALIQVMTRLRANLF 447
++ +V I+G ++ +A + L V R NL
Sbjct: 326 PNERLVIITGQPQNIQMAVNLLYHVSFRDLLNLV 359
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 64/124 (51%), Gaps = 9/124 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ +R + + +IGK G +N+IR++SGA + V S + ++ VS D
Sbjct: 68 QIHMRCLIVTQDASIIIGKAGKHVNEIREKSGARVMVSESIPGNPERILNVSGP---LDA 124
Query: 343 LSATIEAVVRL---QPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLT 399
+S + +VR +P + + G + T + ++P SR+G +IG+GGS I E++ +
Sbjct: 125 VSKSFGLIVRRINDEPFDTPSV---PGSRAVTIKFIIPHSRMGSVIGRGGSKIKEIQDAS 181
Query: 400 KANI 403
A +
Sbjct: 182 GAKL 185
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
D + Q+ + L+ + +IGK G+ V IR ++GA R++ E +P R
Sbjct: 60 DPPAPPAAQIHMRCLIVTQDASIIIGKAGKHVNEIREKSGA--RVMVSESIPGNPER--- 114
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISN-----SHSSSGSLVG 239
++ +SG V K+ I R++D P + + S HS GS++G
Sbjct: 115 ILNVSGPLDAVSKSFGLIVRRINDEPFDTPSVPGSRAVTIKFIIPHSRMGSVIG 168
>gi|449277028|gb|EMC85335.1| Insulin-like growth factor 2 mRNA-binding protein 1, partial
[Columba livia]
Length = 519
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/387 (20%), Positives = 169/387 (43%), Gaps = 65/387 (16%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++++S +
Sbjct: 137 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEG 196
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A ++I E ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 197 CSAA------------------CKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGK 238
Query: 158 GGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL--- 212
G+ ++ + +T +I I L+D L + + + G +A +I ++
Sbjct: 239 EGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCRAEQEIMKKVREA 294
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG--PYGGYKGDTAGDWSRS 270
++N + L + I + ++ L +++ + + G PY +
Sbjct: 295 YENDVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVSGAAPYSSF----------- 343
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
+ ++ ++ + P +G +IGK G I Q+ + + A+IK+ T
Sbjct: 344 --------MPPEQETVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVR 395
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLI 385
+ V ++ EA + Q R K++ ++ + T + VP S G +I
Sbjct: 396 MVV---------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVI 446
Query: 386 GKGGSIITEMRRLTKANIRILPKENLP 412
GKGG + E++ LT A + ++P++ P
Sbjct: 447 GKGGKTVNELQNLTAAEV-VVPRDQTP 472
>gi|255943089|ref|XP_002562313.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587046|emb|CAP94706.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 132/307 (42%), Gaps = 61/307 (19%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNA 101
D R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T
Sbjct: 46 DLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGQ 99
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
+ + L + ++ + G ++G H V +LL+ +Q+G +IG+ G
Sbjct: 100 LRSLARAYAIVAKGLLEGAPQM---GMGGIVSNNGTHPV--RLLISHNQMGTIIGRQGLK 154
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
+++I+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R
Sbjct: 155 IKHIQDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAIWEIGKCLLDDWQRGTG 210
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMG--PYG-GYKGDT--------------- 263
+ L P + G PL P G GY+ +T
Sbjct: 211 TV-------------LYNPAVRASLSGSQPLNNNPPAGNGYQNNTSSRQYNRTGNGADFS 257
Query: 264 -----------AGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
AG+ L + +++ ++ S+ P +G +IG+GG I +IR+
Sbjct: 258 DGGYNRRSNSDAGNRGYPLVTEDGEEIQTQNISI----PADMVGCIIGRGGTKITEIRRS 313
Query: 313 SGAAIKV 319
SGA I +
Sbjct: 314 SGARISI 320
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 280 DGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKAPHDET----GERMFTI 335
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 336 MGSAQANEKALYLLYENLEAEKTRRSQL 363
>gi|395839833|ref|XP_003792780.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 5 [Otolemur garnettii]
Length = 441
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 133/300 (44%), Gaps = 39/300 (13%)
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
E++ ++ K+L + +G +IGK G+ ++ I ETG +I I + L +
Sbjct: 131 EEAKIAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERT 188
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGI-- 249
+ + G A +I +L + + +LA + +L+ P +GI
Sbjct: 189 ITVKGTVEACANAEIEIMKKLRE--AFENDMLAV------NQQANLI-PGLNLSALGIFS 239
Query: 250 --APLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
++ P G +G P ++ + L P +G +IGK GA I
Sbjct: 240 TGLSVLPPPSGPRGAPPAAPYHPFAQYPEQEI------VNLFIPTQAVGAIIGKKGAHIK 293
Query: 308 QIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL 367
Q+ + +GA+IK+ + EG D VS + ++ EA + Q R K++ ++
Sbjct: 294 QLARFAGASIKI--APAEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFF 344
Query: 368 -----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ + VP+S G +IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 345 NPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 400
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 267 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 325
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 326 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 370
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 371 GKTVNELQNLTSAEVIVPRDQ 391
>gi|242022794|ref|XP_002431823.1| far upstream fuse binding protein, putative [Pediculus humanus
corporis]
gi|212517155|gb|EEB19085.1| far upstream fuse binding protein, putative [Pediculus humanus
corporis]
Length = 708
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 87/405 (21%), Positives = 161/405 (39%), Gaps = 101/405 (24%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
+ P + +G IIGRGGE + +L+ ++ KI++ E G+ ER T+ + N
Sbjct: 50 MVPDKIVGLIIGRGGEQITRLQFESGCKIQM-ERSRGTVERQCTLTGTREAINR------ 102
Query: 108 FVSPAQDALFKVHDRVIAEE----------------------LRGDEDSDGGHQVTAKLL 145
A++ + + +I E +++S Q A+++
Sbjct: 103 ----AREMVMNIVSTLIRNENFGSGGSGNNNNNGNDSFSHPPFHQNQNSVPQGQAFAEIM 158
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKAL 205
+P ++G VIGKGG+ +++++ TGA++ +++D S + ++ ++I+G V A
Sbjct: 159 IPGPKVGLVIGKGGETIKHLQDTTGARMVVVQD----SNSQDYEKPLRITGTQQQVDHAK 214
Query: 206 CQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAG 265
+ + D S A + +S+G GP
Sbjct: 215 DLVYQMIADKDVGSGDRRNRADRSHFNSAGPPSGPNN----------------------- 251
Query: 266 DWSRSLYSAPRDDLSSKEFS-LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
+S D+ S + ++ P A +G VIGKGG +I +I+ +GA ++ +
Sbjct: 252 ------FSNEFDNNSQPGGGVIEILVPRAAVGVVIGKGGEMIKKIQSSTGAKLQFEQGRD 305
Query: 325 E--GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEK---------------------- 360
+ GD I E ED IE + +Q R +
Sbjct: 306 DGPGDRKCILTGKPEQCEDAREKVIELIDSVQRRDDRREPGRTGRNDRNDRDRRGQSAGD 365
Query: 361 IERDSGLIS-FTTR---------LLVPTSRIGCLIGKGGSIITEM 395
+R +G + +R VP +R G +IGKGG I ++
Sbjct: 366 FDRQAGRNERWNSRDRSERNEITFAVPANRAGFVIGKGGEKIKQI 410
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 86/204 (42%), Gaps = 41/204 (20%)
Query: 2 AGQRNSYGKRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
+G R + RSH + GPN D+ Q P V L P +G +IG+G
Sbjct: 228 SGDRRNRADRSHFNSAGPPSGPNNFSNEFDNNSQ----PGGGVIEILVPRAAVGVVIGKG 283
Query: 62 GEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFK 118
GE++K+++ T +K++ + PG + ++T + ED + V D++ +
Sbjct: 284 GEMIKKIQSSTGAKLQFEQGRDDGPGDRKCILT-----GKPEQCEDAREKVIELIDSVQR 338
Query: 119 VHDR--------------VIAEELRGDEDSDGG-------------HQVTAKLLVPSDQI 151
DR + GD D G +++T VP+++
Sbjct: 339 RDDRREPGRTGRNDRNDRDRRGQSAGDFDRQAGRNERWNSRDRSERNEIT--FAVPANRA 396
Query: 152 GCVIGKGGQIVQNIRSETGAQIRI 175
G VIGKGG+ ++ I ++ GA I
Sbjct: 397 GFVIGKGGEKIKQINAQCGAYCEI 420
>gi|449478185|ref|XP_002195336.2| PREDICTED: far upstream element-binding protein 3 [Taeniopygia
guttata]
Length = 558
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 88/158 (55%), Gaps = 15/158 (9%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
+ P + +G IIGRGGE + +++I++ KI+I G ER V + + E+
Sbjct: 119 FKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPC-VLTGTPES------- 170
Query: 107 KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
+ A+ L ++ DR G + G+ ++L+P+ ++G VIGKGG+ ++ ++
Sbjct: 171 --IEQAKRLLGQIVDR--CRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQ 226
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
TG ++ +++D LP+ A D+ ++I+G+A V++A
Sbjct: 227 ERTGVKMIMIQDGPLPTGA---DKPLRITGDAFKVQQA 261
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 13/179 (7%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSKEF 338
++EF + P +G +IG+GG I++I+ ESG I++ DS C++T + E
Sbjct: 116 TEEFKV----PDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLT-GTPES 170
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
E + V R R D S +L+P S++G +IGKGG I +++
Sbjct: 171 IEQAKRLLGQIVDRC--RNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQER 228
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR-ANLFDREGAVSTF 456
T + ++ LP A D+ ++I+GD + A V+ +R + D G S F
Sbjct: 229 TGVKMIMIQDGPLPTGA---DKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRSDF 284
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 121/290 (41%), Gaps = 57/290 (19%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T+ L P K+G +IG+GGE +KQL+ T K+ + + P + + +D+
Sbjct: 200 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGP--------LPTGADKPLRI 251
Query: 103 EDGDKF-VSPAQDALFKV---HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
GD F V A++ + ++ D+ +R D + G + ++ VP +G VIG+
Sbjct: 252 -TGDAFKVQQAREMVLEIIREKDQADFRGVRSDFSARMGGG-SIEVSVPRYAVGIVIGRN 309
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G++++ I+++ G +I+ D+ + ++ + Q+ G L D
Sbjct: 310 GEMIKKIQNDAGVRIQFKPDD-----GISTERVAQVMG---------------LPDRCQH 349
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
+ H+++ I + G G A +G GDWS ++
Sbjct: 350 AAHIISELILTAQERDG--FGNLA-------------IARGRGRGRGDWSVGTPGGVQE- 393
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P G VIGKGG I I Q+SGA +++ + D
Sbjct: 394 -------ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD 436
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET- 99
E +V RY +G +IGR GE++K+++ D +I+ S ERV V D
Sbjct: 294 EVSVPRY-----AVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISTERVAQVMGLPDRCQ 348
Query: 100 NAFEDGDKFVSPAQD----ALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
+A + + AQ+ + + GG Q VP+D+ G VI
Sbjct: 349 HAAHIISELILTAQERDGFGNLAIARGRGRGRGDWSVGTPGGVQ-EITYTVPADKCGLVI 407
Query: 156 GKGGQIVQNIRSETGAQIRILKD 178
GKGG+ +++I ++GA + + ++
Sbjct: 408 GKGGENIKSINQQSGAHVELQRN 430
>gi|341896366|gb|EGT52301.1| hypothetical protein CAEBREN_06932 [Caenorhabditis brenneri]
Length = 538
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 166/402 (41%), Gaps = 116/402 (28%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN------ 100
Y P + +G +IG+GG ++ ++ + ++++ A D++N
Sbjct: 58 YPVPEKMVGLVIGKGGTEIRLIQQTSACRVQM---------------DADDQSNDGIRNC 102
Query: 101 AFEDGDKFVSPAQDALFKVHDR---VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGK 157
E V+ A+ + +V +R ++ E DE VT +L+PSD+IG VIGK
Sbjct: 103 TIEGTPDQVAIAKQMITQVINRNQGIVPTESTDDE-------VTEDILIPSDKIGLVIGK 155
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPS 217
GG+ ++ ++ ++G LR+ +VQ S A+ K L R+ P+
Sbjct: 156 GGETIRTVQEQSG---------------LRTCNVVQDSTSATGQPKPL-----RMSGTPT 195
Query: 218 --RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
+ L + I N+ + S++
Sbjct: 196 AVETAKALVTNIMNNIQGNISML------------------------------------- 218
Query: 276 RDDLSSKEFSLR--LVCPVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLI 331
+ L S + R ++ P + G +IGKGG +I ++ QE+G I K DS D +
Sbjct: 219 QKSLHSDAYPARGEVIVPRLSAGMIIGKGGEMIKRLAQETGTKIQFKPDSDPNSEDRIAV 278
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIE---RDSGLISFTTRLL---VPTSRIGCLI 385
V S+ E + R R +E + +++G+ ++ VP S+ G +I
Sbjct: 279 IVGSR-----------EQIYRATERITEIVNKAIKNNGVNPNGQQIFYLHVPASKCGLVI 327
Query: 386 GKGGSIITEMRRLTKANIRIL-PKENLPKIASEDDEMVQISG 426
GKGG I ++ R T A + P E ++D+++ +I G
Sbjct: 328 GKGGENIKQIERDTGATCGLAGPAEQ----KNDDEKVFEIKG 365
Score = 45.4 bits (106), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 24/122 (19%)
Query: 283 EFSLRLVCPVAN--IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD---DCLITVSSKE 337
E ++ + PV +G VIGKGG I I+Q S +++D+ D +C
Sbjct: 51 ELNIIDIYPVPEKMVGLVIGKGGTEIRLIQQTSACRVQMDADDQSNDGIRNC-------- 102
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLI-------SFTTRLLVPTSRIGCLIGKGGS 390
T+ T + V + ++ I R+ G++ T +L+P+ +IG +IGKGG
Sbjct: 103 ----TIEGTPDQVAIAKQMITQVINRNQGIVPTESTDDEVTEDILIPSDKIGLVIGKGGE 158
Query: 391 II 392
I
Sbjct: 159 TI 160
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 69/153 (45%), Gaps = 14/153 (9%)
Query: 32 DRDQFIIGPEDT----VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEE 87
+R+Q I+ E T L P KIG +IG+GGE ++ ++ +S +R V S
Sbjct: 123 NRNQGIVPTESTDDEVTEDILIPSDKIGLVIGKGGETIRTVQ--EQSGLRTCNVVQDSTS 180
Query: 88 RV--VTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLL 145
S A E V+ + + + + ++ + L D + +++
Sbjct: 181 ATGQPKPLRMSGTPTAVETAKALVTNIMNNI-QGNISMLQKSLHSD-----AYPARGEVI 234
Query: 146 VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
VP G +IGKGG++++ + ETG +I+ D
Sbjct: 235 VPRLSAGMIIGKGGEMIKRLAQETGTKIQFKPD 267
>gi|147844462|emb|CAN82085.1| hypothetical protein VITISV_031054 [Vitis vinifera]
Length = 473
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 150/355 (42%), Gaps = 64/355 (18%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV--------VT 91
P D V+R + P+ K+GSIIGR GE++K++ +T+++IR+ + G+ +R+
Sbjct: 75 PGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIGXMEKKMLSV 134
Query: 92 VYSASDE------TNAFEDGDKFVSPAQDALFKVHDRVIA-EELRGDEDSDGGHQVTA-- 142
+ D + E+ + +SPA DA+ +V RV E GD D QV
Sbjct: 135 LLKVVDNLLEKVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGLFD---QVNTGE 191
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
+ + + G QN+ + + ++ +L +P A + +V++ GEA V+
Sbjct: 192 HWCICASTVRSWFAHFGSKFQNLXAFS-XEVYLLXQNEVPFYAAADERIVELQGEALKVQ 250
Query: 203 KALCQIASRLHD---------------NPSRSQHLLASAISNS---HSSSGSLVGPTAAT 244
KAL + L N + SQ + ++ H +S + +G +
Sbjct: 251 KALEAVVGHLRKFLVDHSVLPLFERTYNATISQDRQSDTWADKSLLHGTSQTGMGSDYSL 310
Query: 245 PI---------------VGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLV 289
P G+ P+ G G G + R+ AP + + +
Sbjct: 311 PAKRESLYLDRETQMEHSGL-PMYGQEHGLSGIRSSGLGRA--GAP----IVTQIAQTMQ 363
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV---SSKEFFED 341
P++ +IG GGA I IR+ SGA + V S D+ + + SS+EF +
Sbjct: 364 IPLSYAEDIIGIGGANIAYIRRTSGAILTVQESRGLPDEITVEIKGTSSQEFISN 418
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 81/188 (43%), Gaps = 26/188 (13%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL--------------- 330
RL+ PV +G +IG+ G +I ++ +E+ A I+V + D +
Sbjct: 80 FRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIGXMEKKMLSVLLKVV 139
Query: 331 ------ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD-SGL---ISFTTRLLVPTSR 380
+ +S +E E LS ++AV+R+ R + E + GL ++ + S
Sbjct: 140 DNLLEKVLISGREEPEAPLSPAMDAVIRVFKRVTGLSESEGDGLFDQVNTGEHWCICAST 199
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
+ GS + + + +L + +P A+ D+ +V++ G+ + AL V+
Sbjct: 200 VRSWFAHFGSKFQNLXAFS-XEVYLLXQNEVPFYAAADERIVELQGEALKVQKALEAVVG 258
Query: 441 RLRANLFD 448
LR L D
Sbjct: 259 HLRKFLVD 266
>gi|256078995|ref|XP_002575777.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043992|emb|CCD81538.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 396
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 36/185 (19%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET--------N 100
P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ + +
Sbjct: 105 IPDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDHAKQMIGD 162
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E K +P A + G T +++VP + G VIGK G+
Sbjct: 163 IIERAGKNGTPTTPAY-----------------NSTGSITTIEMMVPGLKAGLVIGKNGE 205
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLHDNP 216
++N++ E G ++ +++ + P+ D+ ++ISGE + V+KA L I SR D P
Sbjct: 206 TIKNLQEENGVKMVLIQQSNNPTP---EDKPLRISGEPARVEKARQAVLVLINSR--DRP 260
Query: 217 SRSQH 221
S H
Sbjct: 261 GGSMH 265
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 185 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPTP-- 229
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 230 EDKPLRISGEPARVEKARQAVLV--LINSRDRPGGSMHYGYDGQETSQYAVPAEKAGLVI 287
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
GKGG+ ++ I +GA + I K E P +++ + + G +++A+ I+ R
Sbjct: 288 GKGGESIKEICRVSGAHVEISK-EPPPDPSIK---IFNVRGNRQEIEQAIRMISER 339
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 111/287 (38%), Gaps = 81/287 (28%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+ +S G VT + +P +G VIGKGG+ + ++++T +++I S A +
Sbjct: 90 NNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQI-------SQAGTPER 142
Query: 191 LVQISGEASVV---KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIV 247
V ++G + K+ + I R N + + +++S+GS+
Sbjct: 143 TVTLTGTPQQIDHAKQMIGDIIERAGKN--------GTPTTPAYNSTGSIT--------- 185
Query: 248 GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
++ ++ P G VIGK G I
Sbjct: 186 -------------------------------------TIEMMVPGLKAGLVIGKNGETIK 208
Query: 308 QIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
+++E+G I+ ++ T D L E A + V + R +R
Sbjct: 209 NLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAVL---VLINSR-----DRP 260
Query: 365 SGLISF------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
G + + T++ VP + G +IGKGG I E+ R++ A++ I
Sbjct: 261 GGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEI 307
>gi|256078989|ref|XP_002575774.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043995|emb|CCD81541.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 530
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET--------NA 101
P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ + +
Sbjct: 106 PDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDHAKQMIGDI 163
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E K +P A + G T +++VP + G VIGK G+
Sbjct: 164 IERAGKNGTPTTPAY-----------------NSTGSITTIEMMVPGLKAGLVIGKNGET 206
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLHDNPS 217
++N++ E G ++ +++ + P+ D+ ++ISGE + V+KA L I SR D P
Sbjct: 207 IKNLQEENGVKMVLIQQSNNPT---PEDKPLRISGEPARVEKARQAVLVLINSR--DRPG 261
Query: 218 RSQH 221
S H
Sbjct: 262 GSMH 265
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 111/287 (38%), Gaps = 81/287 (28%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+ +S G VT + +P +G VIGKGG+ + ++++T +++I S A +
Sbjct: 90 NNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQI-------SQAGTPER 142
Query: 191 LVQISGEASVV---KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIV 247
V ++G + K+ + I R N + + +++S+GS+
Sbjct: 143 TVTLTGTPQQIDHAKQMIGDIIERAGKN--------GTPTTPAYNSTGSIT--------- 185
Query: 248 GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
++ ++ P G VIGK G I
Sbjct: 186 -------------------------------------TIEMMVPGLKAGLVIGKNGETIK 208
Query: 308 QIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
+++E+G I+ ++ T D L E A + V + R +R
Sbjct: 209 NLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAVL---VLINSR-----DRP 260
Query: 365 SGLISF------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
G + + T++ VP + G +IGKGG I E+ R++ A++ I
Sbjct: 261 GGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEI 307
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 185 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPTP-- 229
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 230 EDKPLRISGEPARVEKARQAVLV--LINSRDRPGGSMHYGYDGQETSQYAVPAEKAGLVI 287
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
GKGG+ ++ I +GA + I K E P +++ + + G +++A+ I+ R
Sbjct: 288 GKGGESIKEICRVSGAHVEISK-EPPPDPSIK---IFNVRGNRQEIEQAIRMISER 339
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 38/178 (21%), Positives = 80/178 (44%), Gaps = 11/178 (6%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
+ + S+ + P +G VIGKGG I Q++ ++ +++ + T +T + +
Sbjct: 92 NSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQISQAGTPERTVTLTGTPQ 151
Query: 337 EFFEDTLSATIEAVVRLQPR---CSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ D I ++ + + +G I+ T ++VP + G +IGK G I
Sbjct: 152 QI--DHAKQMIGDIIERAGKNGTPTTPAYNSTGSIT-TIEMMVPGLKAGLVIGKNGETIK 208
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREG 451
++ + ++ + N P + +D+ ++ISG+ + A V+ + N DR G
Sbjct: 209 NLQEENGVKMVLIQQSNNP---TPEDKPLRISGEPARVEKARQAVLVLI--NSRDRPG 261
>gi|255719726|ref|XP_002556143.1| KLTH0H06050p [Lachancea thermotolerans]
gi|238942109|emb|CAR30281.1| KLTH0H06050p [Lachancea thermotolerans CBS 6340]
Length = 392
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 128/306 (41%), Gaps = 54/306 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R LC +++ I+G GGE + +++ +T ++I + + + G ERV+ + ++
Sbjct: 59 RMLCLVKQASMIVGPGGEKISRMKEETNTRINVSDNIRGVPERVIFIRGRCEDV------ 112
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+F + R I E G E S+ +T +L+P +GCVIG+ G ++ I
Sbjct: 113 --------AKVFGMVVRAINGETDG-ESSEQSATLTLNILIPHHMMGCVIGRQGSRLREI 163
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVV--------------------KKAL 205
+ A++ + + LP + +D ++ +SG A + KK +
Sbjct: 164 EELSAAKL-MAGPQTLP---MSNDRILCVSGVADAIHIATYYVGQTILNHKATFASKKCI 219
Query: 206 CQIASRLHDNPSRS-----QHLLASAISNSHSSSGSLVGPTA------ATPIVGIAPLMG 254
+ S LH S QH + L +A A P V AP M
Sbjct: 220 FYLPSLLHSVLVNSYGVSLQHQQQHQYRPGENGKKRLHRYSASPDFGYAYPGVPSAPHMA 279
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
+ DT + AP+ L +E + +G VIGKGG IN I++ +G
Sbjct: 280 VHNVRVADTLAAATIPPALAPQLSLIQQEVYID----DNYVGNVIGKGGKHINSIKETTG 335
Query: 315 AAIKVD 320
+I++D
Sbjct: 336 CSIQID 341
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 42/172 (24%)
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
P ++++ LR++C V ++G GG I+++++E+ I V
Sbjct: 47 PGNEINKDYIHLRMLCLVKQASMIVGPGGEKISRMKEETNTRINVS-------------- 92
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLI-----------------SFTTRLLVP 377
D + E V+ ++ RC E + + G++ + T +L+P
Sbjct: 93 ------DNIRGVPERVIFIRGRC-EDVAKVFGMVVRAINGETDGESSEQSATLTLNILIP 145
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
+GC+IG+ GS + E+ L+ A + P + LP +D ++ +SG D
Sbjct: 146 HHMMGCVIGRQGSRLREIEELSAAKLMAGP-QTLPM---SNDRILCVSGVAD 193
>gi|147818796|emb|CAN67284.1| hypothetical protein VITISV_021596 [Vitis vinifera]
Length = 332
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 83/159 (52%), Gaps = 12/159 (7%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDG 105
P ++G IIG+GGE +K L++ + +KI++ + P S R+V + D+
Sbjct: 103 IPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQ---IAKA 159
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
++ ++ +++ L G G Q K VP++++G +IGKGG+ ++N+
Sbjct: 160 EQLINDVLSEAEAGGSGIVSRRLTGQA---GSEQFVMK--VPNNKVGLIIGKGGETIKNM 214
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
++ TGA+I+++ HLP + VQI G + ++ A
Sbjct: 215 QARTGARIQVIP-LHLPPGDTSMERTVQIDGTSEQIESA 252
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 17/153 (11%)
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVD-------SSSTEGDDCLIT----V 333
S ++ P +G +IGKGG I ++ +SGA I+V +S T + + T
Sbjct: 98 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIA 157
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+++ D LS EA S ++ +G F + VP +++G +IGKGG I
Sbjct: 158 KAEQLINDVLS---EAEAGGSGIVSRRLTGQAGSEQFVMK--VPNNKVGLIIGKGGETIK 212
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
M+ T A I+++P +LP + + VQI G
Sbjct: 213 NMQARTGARIQVIPL-HLPPGDTSMERTVQIDG 244
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 55/185 (29%)
Query: 137 GHQVTAKLL-VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQI 194
G+Q T+K + +P+ ++G +IGKGG+ ++ ++ ++GA+I++ +D P+ R LV++
Sbjct: 93 GYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTR---LVEL 149
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG 254
G + KA + L+ +S + + +V
Sbjct: 150 MGTPDQIAKA---------------EQLINDVLSEAEAGGSGIV---------------- 178
Query: 255 PYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESG 314
SR L S++F +++ P +G +IGKGG I ++ +G
Sbjct: 179 -------------SRRLTG----QAGSEQFVMKV--PNNKVGLIIGKGGETIKNMQARTG 219
Query: 315 AAIKV 319
A I+V
Sbjct: 220 ARIQV 224
>gi|260949329|ref|XP_002618961.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
gi|238846533|gb|EEQ35997.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
Length = 488
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 132/346 (38%), Gaps = 96/346 (27%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVY-SASDETNAFED 104
R CP+++ +++G+ GE + +R +I + E + ERV++V SA D A
Sbjct: 117 RMYCPVKEAAAVVGKKGEKITHIREKANVRIYVSENLKNVPERVISVKGSAEDVARA--- 173
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
F + R I EE + S Q KLLVP +G +IGK G +
Sbjct: 174 ------------FGLITRAILEEPEDEPASITSKQYNLKLLVPHPMVGYIIGKSGSKFRE 221
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL------------ 212
I + A+++ ++ LP +D ++ ++G + A+ I S +
Sbjct: 222 IEENSAAKLK-AAEQALP---YSTDRVLSVTGVGDAIHIAVYYICSVMLAHRDCLKKHKI 277
Query: 213 -HDNPS--RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL----MGPYGGYKGDTAG 265
+ NPS R Q A+ I N S+ A P + P+ MGP K D G
Sbjct: 278 IYYNPSNFRPQLPAANPIMNM-----SIAPQQNAVPYMTGNPMQMQQMGPGPNLK-DAHG 331
Query: 266 DWS----------------RSLYSAPRD-------------------------------- 277
+S R ++ P +
Sbjct: 332 SYSQVPKPYNFQMMFQPSARPQFNGPSNMPNTQIQIGAQNSFTDEHGNTIIGDVITQMPV 391
Query: 278 --DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAA-IKVD 320
S +FS + +NIG VIGKGG I QIR+ SG +K++
Sbjct: 392 QISSSPDKFSEDVFVANSNIGSVIGKGGNNIKQIRESSGCTYVKIE 437
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 12/141 (8%)
Query: 268 SRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD 327
S+ + S +DD +S S+R+ CPV V+GK G I IR+++ I V +
Sbjct: 99 SKPISSHKKDDDAST-VSVRMYCPVKEAAAVVGKKGEKITHIREKANVRIYVSENLKNVP 157
Query: 328 DCLITVS-SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLIS---FTTRLLVPTSRIGC 383
+ +I+V S E A++ E+ E + I+ + +LLVP +G
Sbjct: 158 ERVISVKGSAEDVARAFGLITRAIL-------EEPEDEPASITSKQYNLKLLVPHPMVGY 210
Query: 384 LIGKGGSIITEMRRLTKANIR 404
+IGK GS E+ + A ++
Sbjct: 211 IIGKSGSKFREIEENSAAKLK 231
>gi|242019024|ref|XP_002429966.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212515021|gb|EEB17228.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 319
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 36 FIIGPEDTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVV 90
+G + VY + L P G+IIG+GGE + QL+ DT +++++ + P + ERV
Sbjct: 59 LFLGGDGIVYHLKILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKANDFYPCTTERVC 118
Query: 91 TVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDS----DGGHQVTAKLLV 146
V T + E +S D + + D D +S D QV K+L+
Sbjct: 119 LV------TGSVEAIMAVMSFIMDKIKEKPDLTSKAINTSDTESKLSADRSKQV--KILI 170
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALC 206
P+ G +IGKGG ++ ++ E+G+ I++ + + S L+ + V I GE KKA+
Sbjct: 171 PNSTAGMIIGKGGNYIKQMKEESGSYIQLSQKSNDASLQLQ-ERCVTIIGEMENNKKAIL 229
Query: 207 QIASRLHDNP 216
++ +++ ++P
Sbjct: 230 KLLAKVVEDP 239
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 95/207 (45%), Gaps = 45/207 (21%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEF 338
+ L+++ P G +IGKGG I Q+++++GA +K+ ++ T CL+T
Sbjct: 68 YHLKILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKANDFYPCTTERVCLVT------ 121
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFT-----------------TRLLVPTSRI 381
++EA++ + +KI+ L S ++L+P S
Sbjct: 122 ------GSVEAIMAVMSFIMDKIKEKPDLTSKAINTSDTESKLSADRSKQVKILIPNSTA 175
Query: 382 GCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR 441
G +IGKGG+ I +M+ + + I++ K N + + + V I G+++ K A+++++ +
Sbjct: 176 GMIIGKGGNYIKQMKEESGSYIQLSQKSNDASLQLQ-ERCVTIIGEMENNKKAILKLLAK 234
Query: 442 ----------LRANLFDREGAVSTFVP 458
L + D G V+ F P
Sbjct: 235 VVEDPQSGSCLNVSYADIPGPVANFNP 261
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 78/184 (42%), Gaps = 48/184 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
K+LVP G +IGKGG+ + ++ +TGA++++ K C ++ + ++G +
Sbjct: 71 KILVPCIAAGAIIGKGGETIAQLQKDTGARMKMSKANDFYPCT--TERVCLVTGSVEAIM 128
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
+ I ++ + P L + AI+ S + S
Sbjct: 129 AVMSFIMDKIKEKP----DLTSKAINTSDTES---------------------------K 157
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
+ D S+ ++++ P + G +IGKGG I Q+++ESG+ I++
Sbjct: 158 LSADRSK---------------QVKILIPNSTAGMIIGKGGNYIKQMKEESGSYIQLSQK 202
Query: 323 STEG 326
S +
Sbjct: 203 SNDA 206
>gi|242785360|ref|XP_002480578.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218720725|gb|EED20144.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 367
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 136/291 (46%), Gaps = 37/291 (12%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + V G +RV+TV T A +
Sbjct: 51 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTV------TGALQGC 104
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ S L + +V + G ++G H + +LL+ +Q+G +IG+ G +++I
Sbjct: 105 ARAYSIVAKGLLEGAPQV---GMGGVVQNNGTHPI--RLLISHNQMGTIIGRQGLKIKHI 159
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH--LL 223
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R L
Sbjct: 160 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAVWEIGKCLIDDWQRGTGTVLY 215
Query: 224 ASAISNSHSSSGSL-----------VGPTAATPIVGIAPLMGPYGGYK----GDTAGDWS 268
A+ S SG L G + A P GGY GD G+ +
Sbjct: 216 NPAVRVSIGGSGQLNHNGDRTGGSYGGGRSYNRTGNGADFSEPSGGYNRRGSGDN-GNRN 274
Query: 269 RSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
L + +++ ++ S+ P +G +IG+GG+ I++IR+ SGA I +
Sbjct: 275 LPLVTDDGEEVQTQNISI----PADMVGCIIGRGGSKISEIRRSSGARISI 321
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 134 SDGGHQV-TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+D G +V T + +P+D +GC+IG+GG + IR +GA+I I K H + + +
Sbjct: 279 TDDGEEVQTQNISIPADMVGCIIGRGGSKISEIRRSSGARISIAKAPHDET----GERMF 334
Query: 193 QISGEASVVKKALCQIASRLH-DNPSRSQH 221
I G A +KAL + L + RSQ
Sbjct: 335 TIMGSAQANEKALYLLYENLEAEKMRRSQQ 364
>gi|345495410|ref|XP_001602171.2| PREDICTED: hypothetical protein LOC100118119 [Nasonia vitripennis]
Length = 533
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 17/177 (9%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P G+IIG+GGE + QL+ DT +++++ ++ PG+ ERV + + D A
Sbjct: 48 KVLVPGVAAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSVDAIMAV 107
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
D F+ + + + G ++ QV K+LVP+ G +IGK G +
Sbjct: 108 MD---FIMEKIREKPDLTTKTTVDFDSGKATAERDKQV--KILVPNSTAGMIIGKAGNYI 162
Query: 163 QNIRSETGAQIRI---LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
+ I+ E+G+ ++I KD L + + + GE + AL I +++ D+P
Sbjct: 163 KQIKEESGSYVQISQKAKDVSL------QERCITVIGEKENNRNALLMILAKVADDP 213
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 99/204 (48%), Gaps = 33/204 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEF 338
+ L+++ P G +IGKGG I Q+++++GA +K+ S T CLIT S
Sbjct: 45 YHLKVLVPGVAAGAIIGKGGETIAQLQKDTGARVKMSKSHDFYPGTTERVCLITGSV--- 101
Query: 339 FEDTLSATIEAV---VRLQPRCSEK--IERDSGLISF----TTRLLVPTSRIGCLIGKGG 389
D + A ++ + +R +P + K ++ DSG + ++LVP S G +IGK G
Sbjct: 102 --DAIMAVMDFIMEKIREKPDLTTKTTVDFDSGKATAERDKQVKILVPNSTAGMIIGKAG 159
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-------- 441
+ I +++ + + ++I K K S + + + G+ + ++AL+ ++ +
Sbjct: 160 NYIKQIKEESGSYVQISQKA---KDVSLQERCITVIGEKENNRNALLMILAKVADDPQSG 216
Query: 442 --LRANLFDREGAVSTFVPV-LPY 462
L + D G V+ + P PY
Sbjct: 217 TCLNVSYADVSGPVANYNPTGSPY 240
>gi|313228886|emb|CBY18038.1| unnamed protein product [Oikopleura dioica]
Length = 626
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 140/356 (39%), Gaps = 45/356 (12%)
Query: 15 QTDYADHGPNKRRYTGDDRDQFIIGP-EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTK 73
Q D + PN RR P + T +L K+G +IG+GG+ +K LR +
Sbjct: 113 QNDSRNRAPNTRRAVTQPPMPNPSQPWQTTCEEFLISPDKVGVVIGKGGQNLKNLRQKYQ 172
Query: 74 SKIRI--GETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD 131
+ + +T P +V+ + S + N + ++ +E +
Sbjct: 173 VSLELVQKDTDPEGVAKVLKITGNSTQINGTR-------------MDIFTTLLPKEEKTA 219
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
G QV ++ VP +G +IGK G+ + +++ ET +I+ +E P A R
Sbjct: 220 AKLAPGGQVKSEFPVPQGAVGVIIGKKGETITHLQGETVTRIQFKPEE--PDAATRG--- 274
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
I+G V +A QI + R + I N P A P G P
Sbjct: 275 CYITGSMEGVLRAQ-QIVMSI----CRKKMTGVDTIQNIPKFGQGQAPPMMAPPHNGAPP 329
Query: 252 L---MGP--YGGYKGDTAGDWSRSLYSAPRDDLS-SKEFSLRLVCPVANIGGVIGKGGAI 305
+ P +GGY G ++ Y PR + E ++ P G VIGKGG
Sbjct: 330 MNWNQSPAGHGGYNG------MQNSYQMPRPPPALQPEQTVDYPVPAQKAGAVIGKGGEH 383
Query: 306 INQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
I I+ +SG I + ++ +D ++ +F T+ E V Q EK+
Sbjct: 384 IIAIKNQSGCQITQNKTNPPSND-----TAWRYF--TIKGQPEGVQLAQKLIQEKV 432
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 82/176 (46%), Gaps = 15/176 (8%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE-- 98
+ V Y P + +G +IGRGGE +++++ +T I++ GSE R T+ ++
Sbjct: 47 DKVVEEYPIPDQLVGLVIGRGGENIQRIQAETNCGIQVQAQSTGSENRPCTLTGTPEQLQ 106
Query: 99 --TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
NA ++ + +P + R + S + L+ D++G VIG
Sbjct: 107 AAKNALQNDSRNRAP--------NTRRAVTQPPMPNPSQPWQTTCEEFLISPDKVGVVIG 158
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
KGGQ ++N+R + + +++ + P + +++I+G ++ + I + L
Sbjct: 159 KGGQNLKNLRQKYQVSLELVQKDTDPEGVAK---VLKITGNSTQINGTRMDIFTTL 211
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 104/290 (35%), Gaps = 81/290 (27%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD----EHLPSCALRSDE 190
D G +V + +P +G VIG+GG+ +Q I++ET I++ E+ P + E
Sbjct: 44 DEGDKVVEEYPIPDQLVGLVIGRGGENIQRIQAETNCGIQVQAQSTGSENRPCTLTGTPE 103
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+Q K AL + N R+ V
Sbjct: 104 QLQ------AAKNALQNDSRNRAPNTRRA---------------------------VTQP 130
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
P+ P + W + +EF L+ P +G VIGKGG + +R
Sbjct: 131 PMPNP--------SQPW----------QTTCEEF---LISP-DKVGVVIGKGGQNLKNLR 168
Query: 311 QESGAAIKVDSSSTE-----------GDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSE 359
Q+ ++++ T+ G+ I + + F L + +L P
Sbjct: 169 QKYQVSLELVQKDTDPEGVAKVLKITGNSTQINGTRMDIFTTLLPKEEKTAAKLAPGGQV 228
Query: 360 KIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKE 409
K E VP +G +IGK G IT ++ T I+ P+E
Sbjct: 229 KSE-----------FPVPQGAVGVIIGKKGETITHLQGETVTRIQFKPEE 267
>gi|414586732|tpg|DAA37303.1| TPA: hypothetical protein ZEAMMB73_623211 [Zea mays]
Length = 322
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 33/228 (14%)
Query: 48 LCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDK 107
L P +K+G+IIG GE V++L +T++ +RI E+ V ++ E D+
Sbjct: 2 LIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCEAEQAVIIFGR-------EQLDE 54
Query: 108 FVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
+ PA DAL +V+ + I + D + + ++L PS+Q +IG+ G ++ +I
Sbjct: 55 PLPPAMDALLRVYQQTINND---SLDVGPDNVIVRQILAPSEQAASLIGEHGVMINSIME 111
Query: 168 ETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAI 227
+ IR+L +E LPS ++ L I PS + L
Sbjct: 112 ASQTVIRVLGNE-LPS---------------DLIDTLLKWI-------PSNDEELRLRLS 148
Query: 228 SNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S S ++ + V A+ P+ AP +G + ++ G + ++Y P
Sbjct: 149 SRSTATPHASVAAFASAPVSHTAPWLGKFIAFEPFNVGGFDWAIYFYP 196
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 66/143 (46%), Gaps = 9/143 (6%)
Query: 288 LVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATI 347
++ P +G +IG G + ++ +E+ A +++ + + + +E ++ L +
Sbjct: 1 MLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCEAEQAVIIFGREQLDEPLPPAM 60
Query: 348 EAVVRLQPRCSEKIERDSGLISFTTR-LLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+A++R+ + D G + R +L P+ + LIG+ G +I + ++ IR+L
Sbjct: 61 DALLRVYQQTINNDSLDVGPDNVIVRQILAPSEQAASLIGEHGVMINSIMEASQTVIRVL 120
Query: 407 PKE--------NLPKIASEDDEM 421
E L I S D+E+
Sbjct: 121 GNELPSDLIDTLLKWIPSNDEEL 143
>gi|357137683|ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 145/339 (42%), Gaps = 42/339 (12%)
Query: 40 PED-----TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVT 91
PED T R+L G IIG+GG + + + ++I++ E PG+ +R++
Sbjct: 38 PEDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIM 97
Query: 92 VYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQI 151
V DE A+ V ++++AE G+E ++ + +L+VP+
Sbjct: 98 VSGLFDEV-------------IKAMELVLEKLLAE---GEEFNEAEARPKFRLVVPNSSC 141
Query: 152 GCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
G +IGKGG ++ ++ A I+I ++ + D LV I+G + +A+ I S+
Sbjct: 142 GGIIGKGGATIKAFIEDSHAGIKISPQDN--NFVGLHDRLVTITGPFNNQMRAIYLILSK 199
Query: 212 L----HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP--YGG-YKGDTA 264
L H P+ S + + + VG A GP YGG Y+ +
Sbjct: 200 LSEDVHYPPNLSSPFPYAGLGFPSYPAPVPVGYMIPQVPYNNAVNYGPNGYGGRYQNNKP 259
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G RS P + + + ++ + +IG V+G+ G I +I Q SGA IK+ S
Sbjct: 260 GTPVRS----PATNDAQESHTIGVAD--EHIGAVVGRAGRNITEIIQASGARIKI---SD 310
Query: 325 EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
GD T K T A A + R S ER
Sbjct: 311 RGDFIAGTSDRKVTITGTPEAIQAAESMIMQRVSASSER 349
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS---TEGDDCLI 331
P DD K LR + G +IGKGG+ IN + +SGA I++ S +D +I
Sbjct: 38 PEDD-KEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRII 96
Query: 332 TVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSI 391
VS F++ + A +E V L+ +E E + RL+VP S G +IGKGG+
Sbjct: 97 MVSG--LFDEVIKA-MELV--LEKLLAEGEEFNEAEARPKFRLVVPNSSCGGIIGKGGAT 151
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
I + A I+I P++N D +V I+G + A+ ++++L
Sbjct: 152 IKAFIEDSHAGIKISPQDN--NFVGLHDRLVTITGPFNNQMRAIYLILSKL 200
>gi|170573376|ref|XP_001892446.1| KH domain containing protein [Brugia malayi]
gi|158602012|gb|EDP38733.1| KH domain containing protein [Brugia malayi]
Length = 579
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 152/376 (40%), Gaps = 79/376 (21%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFV 109
P +G +IGRGGE + Q++ T ++++ G+ R T+ + D+
Sbjct: 40 PDHCVGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSV------DRAR 93
Query: 110 SPAQDALFKVHDRVI---AEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
+ + + + +R A G G Q+T ++ +P + G VIGKGG+ ++NI+
Sbjct: 94 AMINEVIARAGNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQ 153
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
+TG ++ ++++ + ++I+G+ V+ A + L SR H
Sbjct: 154 EQTGVKMVMIQENQESGGQPKP---LRITGDPEKVENARRMVEEILQ---SREDH----- 202
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSL 286
P + G G + G S PR
Sbjct: 203 -----------------------PPGHFGFPGSFGISGGQRSIGEVIVPR---------- 229
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLITVSSKEFFEDTLS 344
A++G +IGKGG I ++ ESGA I K D T + C + +
Sbjct: 230 ------ASVGMIIGKGGETIKRLAAESGAKIQFKPDDDQTAQERCAV-----------IQ 272
Query: 345 ATIEAVVRLQPRCSEKIERD---SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
T E + + SE +++ G F + VP+++ G +IGKGG I ++ + A
Sbjct: 273 GTAEQIAKATQFISELVKKSGAAGGAEMF--YMHVPSNKTGLVIGKGGETIKQICAESGA 330
Query: 402 NIRILPKENLPKIASE 417
++ + + P ASE
Sbjct: 331 HVEL--SRDPPPNASE 344
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 20 DHGPNKRRYTGDDRDQF-IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI 78
DH P + G F I G + ++ + P +G IIG+GGE +K+L ++ +KI+
Sbjct: 201 DHPPGHFGFPGS----FGISGGQRSIGEVIVPRASVGMIIGKGGETIKRLAAESGAKIQF 256
Query: 79 G-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG 137
+ ++ER + +++ +F+S EL + GG
Sbjct: 257 KPDDDQTAQERCAVIQGTAEQ---IAKATQFIS----------------ELVKKSGAAGG 297
Query: 138 HQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD 178
++ + VPS++ G VIGKGG+ ++ I +E+GA + + +D
Sbjct: 298 AEMF-YMHVPSNKTGLVIGKGGETIKQICAESGAHVELSRD 337
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 70/148 (47%), Gaps = 11/148 (7%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL- 353
+G VIG+GG I+QI+ ++ +++ S + T+ + D A I V+
Sbjct: 44 VGLVIGRGGEQISQIQSQTNCRVQMSPESDGNNMRQCTLQGSKMSVDRARAMINEVIARA 103
Query: 354 --QPRCSEKIERDSGLI-----SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+P + D G+ T + +P ++ G +IGKGG I ++ T + ++
Sbjct: 104 GNRPPPNRAGHFDGGIPVGTGRQITQEMFIPGAKCGLVIGKGGETIKNIQEQTGVKM-VM 162
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDA 434
+EN + + + ++I+GD + ++A
Sbjct: 163 IQEN--QESGGQPKPLRITGDPEKVENA 188
>gi|330914909|ref|XP_003296833.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
gi|311330863|gb|EFQ95085.1| hypothetical protein PTT_07029 [Pyrenophora teres f. teres 0-1]
Length = 485
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 133/345 (38%), Gaps = 81/345 (23%)
Query: 56 SIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDA 115
+IIG+GGE V Q+R + +K + + G+ ER++TV D A
Sbjct: 143 TIIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQVD--------------AVSK 188
Query: 116 LFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
F + R + +E + +LL+P IG +IGK G ++ I+ + A++
Sbjct: 189 AFGLIVRTLNQEDLETPSTSTSKAYPMRLLIPHILIGSIIGKAGIRIREIQEASNAKLN- 247
Query: 176 LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN-------PSRSQHLLASAIS 228
D LP+ RS + + G A V A+ +A L + P+ SQ+ S ++
Sbjct: 248 ASDTLLPNSGERS---LIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMA 304
Query: 229 NSHSSSGSLVGPTAATP------------------------------IVGIAPLMGPYGG 258
+ G V P P + G P PYG
Sbjct: 305 ANVVPGGMSVQPYVPQPAGGQYSHPQNFRRQEPPQRTPAHGGYGAPHMHGQPPQQSPYGH 364
Query: 259 YKGDT-AGDWSRSLYSAPRDD-------------------------LSSKEFSLRLVCPV 292
AG SR Y P + + + ++ P
Sbjct: 365 PNMPYGAGSPSRGPYGGPAAPTPYGAHPAAAPVAHGGAAPHAAVGAMPGQPLTQQIFIPN 424
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKE 337
+G +IGKGGA IN+IRQ SG+ IK++ + ++ L+T++ +
Sbjct: 425 DMVGAIIGKGGAKINEIRQLSGSVIKINEPTDNSNERLVTITGTQ 469
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 97/241 (40%), Gaps = 20/241 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG + QIR+ SGA V S + ++TVS + D +S +VR +
Sbjct: 144 IIGKGGENVTQIRRLSGAKCTVSDYSRGAVERILTVSGQ---VDAVSKAFGLIVRTLNQE 200
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASE 417
+ S ++ RLL+P IG +IGK G I E++ + A + LP
Sbjct: 201 DLETPSTSTSKAYPMRLLIPHILIGSIIGKAGIRIREIQEASNAKLNAS-DTLLPNSGER 259
Query: 418 DDEMVQISGDLDLAKDALIQVMTRLRANLF---------DREGAVSTFVP----VLPYIP 464
++ ++ + +A + Q + F R G + VP V PY+P
Sbjct: 260 SLIVLGVADAVHIAVYYVAQTLVEQLTERFGGPAASQYATRSGMAANVVPGGMSVQPYVP 319
Query: 465 VSENGSDGLNYESRDSKRHGRGPPYGGYGSSDLAAGDSYGS-YGSSQL--GGTGSAYGSY 521
G R + R P +GGYG+ + S YG + G + G Y
Sbjct: 320 QPAGGQYSHPQNFRRQEPPQRTPAHGGYGAPHMHGQPPQQSPYGHPNMPYGAGSPSRGPY 379
Query: 522 G 522
G
Sbjct: 380 G 380
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI-LPKENLPKIASEDDEMVQISGDL 428
T ++ +P +G +IGKGG+ I E+R+L+ + I+I P +N ++ +V I+G
Sbjct: 416 LTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPTDN------SNERLVTITGTQ 469
Query: 429 DLAKDALIQVMTRL 442
+ + AL + +RL
Sbjct: 470 ECNQMALYMLYSRL 483
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 137 GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISG 196
G +T ++ +P+D +G +IGKGG + IR +G+ I+I + ++ LV I+G
Sbjct: 413 GQPLTQQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINE-----PTDNSNERLVTITG 467
Query: 197 EASVVKKALCQIASRL 212
+ AL + SRL
Sbjct: 468 TQECNQMALYMLYSRL 483
>gi|449473856|ref|XP_004186185.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC) binding protein 4
[Taeniopygia guttata]
Length = 245
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 93/177 (52%), Gaps = 26/177 (14%)
Query: 40 PEDT------VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTV 92
PE+T R L ++IGSIIG+ GE VK++R + ++I I E + P ER+ T+
Sbjct: 14 PEETELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEGSCP---ERITTI 70
Query: 93 YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIG 152
++D F + + A FK+ + + A GD S G VT +L++P+ Q G
Sbjct: 71 TGSTDAV--------FRAVSMIA-FKLEEDLGAG---GDGVSAGRAPVTLRLVIPASQCG 118
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIA 209
+IGK G ++ IR TGAQ+++ D LP+ R+ V +SG + + + QI
Sbjct: 119 SLIGKAGAKIREIRESTGAQVQVAGD-LLPNSTERA---VTVSGVPDTIIQCVRQIC 171
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 13/122 (10%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LRLV P + G +IGK GA I +IR+ +GA ++V GD L+ S++ T+
Sbjct: 106 VTLRLVIPASQCGSLIGKAGAKIREIRESTGAQVQV-----AGD--LLPNSTERAV--TV 156
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S + +++ C +I D S + LVP IGC+IG+ GS I+E+R+++ A+I
Sbjct: 157 SGVPDTIIQ----CVRQICLDPSSQSSSQEFLVPNDLIGCIIGRHGSKISEIRQMSGAHI 212
Query: 404 RI 405
+I
Sbjct: 213 KI 214
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 26/132 (19%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDETNAFE 103
R + P + GS+IG+ G ++++R T +++++ G+ +P S ER VTV
Sbjct: 108 LRLVIPASQCGSLIGKAGAKIREIRESTGAQVQVAGDLLPNSTERAVTV----------- 156
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
S D + + ++ D S Q + LVP+D IGC+IG+ G +
Sbjct: 157 ------SGVPDTIIQCVRQICL-----DPSSQSSSQ---EFLVPNDLIGCIIGRHGSKIS 202
Query: 164 NIRSETGAQIRI 175
IR +GA I+I
Sbjct: 203 EIRQMSGAHIKI 214
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 21/141 (14%)
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
+P + S +LR++ IG +IGK G + +IR++S A I + S C +
Sbjct: 13 SPEETELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEGS-----CPERI 67
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERD---------SGLISFTTRLLVPTSRIGCL 384
+ T++ + +AV R + K+E D +G T RL++P S+ G L
Sbjct: 68 T-------TITGSTDAVFRAVSMIAFKLEEDLGAGGDGVSAGRAPVTLRLVIPASQCGSL 120
Query: 385 IGKGGSIITEMRRLTKANIRI 405
IGK G+ I E+R T A +++
Sbjct: 121 IGKAGAKIREIRESTGAQVQV 141
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 98/214 (45%), Gaps = 27/214 (12%)
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
E+++ +T ++L+ +IG +IGK G+ V+ IR ++ A+I I + SC R +
Sbjct: 15 EETELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSTARITISEG----SCPER---I 67
Query: 192 VQISGEASVVKKALCQIASRLH-------DNPSRSQHLLASAISNSHSSSGSLVGPTAAT 244
I+G V +A+ IA +L D S + + + S GSL+G A
Sbjct: 68 TTITGSTDAVFRAVSMIAFKLEEDLGAGGDGVSAGRAPVTLRLVIPASQCGSLIGKAGAK 127
Query: 245 ---------PIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD---DLSSKEFSLRLVCPV 292
V +A + P + T ++ R D SS+ S + P
Sbjct: 128 IREIRESTGAQVQVAGDLLPNSTERAVTVSGVPDTIIQCVRQICLDPSSQSSSQEFLVPN 187
Query: 293 ANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
IG +IG+ G+ I++IRQ SGA IK+ + TEG
Sbjct: 188 DLIGCIIGRHGSKISEIRQMSGAHIKI-GNQTEG 220
>gi|194383878|dbj|BAG59297.1| unnamed protein product [Homo sapiens]
Length = 300
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 137/309 (44%), Gaps = 53/309 (17%)
Query: 132 EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
+++ ++ K+L + +G +IGK G+ ++ I ETG +I I + L +
Sbjct: 11 DETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNPERT 68
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
+ + G A +I +L + + +LA N+HS S + P
Sbjct: 69 ITVKGTVEACASAEIEIMKKLRE--AFENDMLAV---NTHSGYFSSLYPHHQ-------- 115
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
GP+ + +S P ++ + L P +G +IGK GA I Q+ +
Sbjct: 116 -FGPFPHH------------HSYPEQEI------VNLFIPTQAVGAIIGKKGAHIKQLAR 156
Query: 312 ESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL---- 367
+GA+IK+ + EG D VS + ++ EA + Q R K++ ++
Sbjct: 157 FAGASIKI--APAEGPD----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKE 207
Query: 368 -ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQIS 425
+ + VP+S G +IGKGG + E++ LT A + I+P+ P E++E +V+I
Sbjct: 208 EVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRGQTP---DENEEVIVRII 263
Query: 426 GDLDLAKDA 434
G ++ A
Sbjct: 264 GHFFASQTA 272
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 17/135 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 126 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 184
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 185 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 229
Query: 159 GQIVQNIRSETGAQI 173
G+ V +++ T A++
Sbjct: 230 GKTVNELQNLTSAEV 244
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 86/170 (50%), Gaps = 28/170 (16%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 177 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 226
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 227 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 276
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
G ++ IR TGAQ+++ D LP+ R+ + + + K +C +
Sbjct: 277 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGVPQSVTECVKQICLV 325
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 174 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 226
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 227 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 253
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 254 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 293
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 91/193 (47%), Gaps = 31/193 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 174 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 221
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 222 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 281
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR-EGA 452
E+R T A +++ + LP + + + I+G + + Q+ + L +G
Sbjct: 282 EIRESTGAQVQVA-GDMLP---NSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGR 337
Query: 453 VSTFVPVLPYIPV 465
V T +PY P+
Sbjct: 338 VMT----IPYQPM 346
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
D Q T +L +P++ IGC+IG+ G + IR +GAQI+I S V I
Sbjct: 435 DASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVE-----GSSGRQVTI 489
Query: 195 SGEASVVKKALCQIASRL 212
+G A+ + A I +RL
Sbjct: 490 TGSAASISLAQYLINARL 507
>gi|426237799|ref|XP_004012845.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Ovis aries]
Length = 576
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 82/389 (21%), Positives = 167/389 (42%), Gaps = 56/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ + +T +I I L L + E VK A+ +N R++
Sbjct: 298 NLKKVEQDTETKITI---SSLQDLTLYNPE------RTITVKGAI--------ENCCRAE 340
Query: 221 HLLASAISNSHSSS-GSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+ + ++ + ++ + P + +A + G + S +AP
Sbjct: 341 QEIMKKVREAYENDVAAMSLQSHLIPGLNLAAV-GLFPASSSAVPPPPSSVTGAAPYSSF 399
Query: 280 SSKEFSL-RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
E + ++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 400 MXPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 454
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 455 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 510
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 511 ELQNLTAAEV-VVPRDQTP---DENDQVI 535
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 31/151 (20%)
Query: 37 IIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV--- 92
+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMXPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITGP 458
Query: 93 ----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPS 148
+ A + F P ++ + H R VP+
Sbjct: 459 PEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VPA 495
Query: 149 DQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 SAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 526
>gi|146197849|dbj|BAF57636.1| hnRNP K protein [Dugesia japonica]
Length = 337
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 132/309 (42%), Gaps = 36/309 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R+L P + GS+IG+ GE ++ LR ++I I + ER++++ + D
Sbjct: 23 RFLIPSKAAGSVIGKSGENIRNLRRMFMARINISDN--SGPERILSLEA---------DL 71
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
D + L K+ + + +D + V ++LV +G +IG+GG + ++
Sbjct: 72 DTILEILTQCLEKMEGCIPLPRAGSGDCNDSINHVDLRMLVNQSLVGALIGRGGGRINDL 131
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
R + +R+LK + C +D +VQ+ G +V + +I + P R +
Sbjct: 132 REK--CDLRVLK-VYQTVCPDSTDRIVQLVGAIPLVIDCIGKIVDMCKETPVREPKVNYD 188
Query: 226 AISNSHSSSGSLVG--PTAATPIVGIAP---------LMGPYGGYKG--------DTAGD 266
A + H+++ G A P + + YK + +
Sbjct: 189 AQNYDHAAANHYGGWAQNAIRPNNNLTTRSLGFSRPGFLKHQASYKNEHYDYSYPNNYRE 248
Query: 267 WSRSLYSAPRDDLSSKEFS-LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE 325
S ++ D+ + E +RL P +G +IG GG+ I Q+R +SGA I + S
Sbjct: 249 MDTSFRNSHYDEQDNNEVQEIRL--PHKVVGAIIGPGGSRIQQVRMDSGAHITISSPDRN 306
Query: 326 GDDCLITVS 334
+ ++T+S
Sbjct: 307 PQERVVTIS 315
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 27/168 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
LR + P G VIGK G I +R+ A I + +S G + +++ L
Sbjct: 20 IELRFLIPSKAAGSVIGKSGENIRNLRRMFMARINISDNS--GPERILS----------L 67
Query: 344 SATIEAVVRLQPRCSEKIE------------RDSGLISFTTRLLVPTSRIGCLIGKGGSI 391
A ++ ++ + +C EK+E + + R+LV S +G LIG+GG
Sbjct: 68 EADLDTILEILTQCLEKMEGCIPLPRAGSGDCNDSINHVDLRMLVNQSLVGALIGRGGGR 127
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVM 439
I ++R K ++R+L K D +VQ+ G + L D + +++
Sbjct: 128 INDLRE--KCDLRVL-KVYQTVCPDSTDRIVQLVGAIPLVIDCIGKIV 172
>gi|256078997|ref|XP_002575778.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043991|emb|CCD81537.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 373
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET--------NA 101
P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ + +
Sbjct: 106 PDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDHAKQMIGDI 163
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E K +P A + G T +++VP + G VIGK G+
Sbjct: 164 IERAGKNGTPTTPAY-----------------NSTGSITTIEMMVPGLKAGLVIGKNGET 206
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLHDNPS 217
++N++ E G ++ +++ + P+ D+ ++ISGE + V+KA L I SR D P
Sbjct: 207 IKNLQEENGVKMVLIQQSNNPTP---EDKPLRISGEPARVEKARQAVLVLINSR--DRPG 261
Query: 218 RSQH 221
S H
Sbjct: 262 GSMH 265
Score = 42.0 bits (97), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 28/176 (15%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 185 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPTP-- 229
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 230 EDKPLRISGEPARVEKARQAVLV--LINSRDRPGGSMHYGYDGQETSQYAVPAEKAGLVI 287
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
GKGG+ ++ I +GA + I K E P +++ + + G +++A+ I+ R
Sbjct: 288 GKGGESIKEICRVSGAHVEISK-EPPPDPSIK---IFNVRGNRQEIEQAIRMISER 339
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 111/287 (38%), Gaps = 81/287 (28%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+ +S G VT + +P +G VIGKGG+ + ++++T +++I S A +
Sbjct: 90 NNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQI-------SQAGTPER 142
Query: 191 LVQISGEASVV---KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIV 247
V ++G + K+ + I R N + + +++S+GS+
Sbjct: 143 TVTLTGTPQQIDHAKQMIGDIIERAGKN--------GTPTTPAYNSTGSIT--------- 185
Query: 248 GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
++ ++ P G VIGK G I
Sbjct: 186 -------------------------------------TIEMMVPGLKAGLVIGKNGETIK 208
Query: 308 QIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
+++E+G I+ ++ T D L E A + V + R +R
Sbjct: 209 NLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAVL---VLINSR-----DRP 260
Query: 365 SGLISF------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
G + + T++ VP + G +IGKGG I E+ R++ A++ I
Sbjct: 261 GGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEI 307
>gi|74141926|dbj|BAE41029.1| unnamed protein product [Mus musculus]
Length = 278
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 31/180 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERII-------TL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|108862918|gb|ABG22073.1| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|215694782|dbj|BAG89973.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 355
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSD---GGHQVTAKLLVPSDQIGCVIG 156
+A ++ D + PA D L +VH R I + L G+ D G +LLVP+ Q G +IG
Sbjct: 3 SAKDEPDAPLPPAVDGLLRVHKR-ITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIG 61
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
K G +++I+ + +RIL E +P AL D +V+I GE V KA+ IAS L
Sbjct: 62 KQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHKAVELIASHL 115
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 73/125 (58%), Gaps = 12/125 (9%)
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRC-------SEKIERDSGLISFTTRLLVPTSRIGCLI 385
+S+K+ + L ++ ++R+ R S++ +R +G + TRLLVP S+ G LI
Sbjct: 2 ISAKDEPDAPLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVG-PTRLLVPASQAGSLI 60
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD-LDLAKDALIQVMTRLRA 444
GK G+ I ++ +K +RIL E++P +A DD +V+I G+ LD+ K A+ + + LR
Sbjct: 61 GKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHK-AVELIASHLRK 117
Query: 445 NLFDR 449
L DR
Sbjct: 118 FLVDR 122
>gi|340959534|gb|EGS20715.1| hypothetical protein CTHT_0025510 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 373
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 126/293 (43%), Gaps = 53/293 (18%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L ++ G IIG+GG+ V LR +T K + + V G +RV+T+ D
Sbjct: 54 RALVSSKEAGVIIGKGGQNVANLREETGVKAGVSKVVQGVYDRVLTITGGCD-------- 105
Query: 106 DKFVSPAQDALFKVHDRVIAE-----ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
A + V R + E + G +G H + KLL+ +Q+G +IG+ GQ
Sbjct: 106 ------AVSRAYAVVARALLEGAPAVSMGGVVQHNGTHPI--KLLISHNQMGTIIGRQGQ 157
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
++ I+ +G ++ + + E LP R +V++ G +++A+ +I L D+ R
Sbjct: 158 RIKYIQDVSGVRM-VAQKEMLPQSTER---IVEVQGTPEGIQRAVWEICKCLVDDWQRGT 213
Query: 221 HLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYS------- 273
+ P T + G G G+ A D+S S
Sbjct: 214 GTV-------------FYNPAVRTQVGGFHDRYGSRVLRTGNGA-DFSNGSRSYGRRSDS 259
Query: 274 ------APRDDLSSKEFSLRLV-CPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P D + +E + + P +G +IG+GG+ I++IR+ SGA I +
Sbjct: 260 EGGPRGPPTHDENGEEIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISI 312
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 89/218 (40%), Gaps = 51/218 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSEERVVTVYSASD--ETN 100
+ L ++G+IIGR G+ +K I S +R+ E +P S ER+V V + +
Sbjct: 140 KLLISHNQMGTIIGRQGQRIKY--IQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRA 197
Query: 101 AFE------------DGDKFVSPA-QDALFKVHDRVIAEELRGDE--------------- 132
+E G F +PA + + HDR + LR
Sbjct: 198 VWEICKCLVDDWQRGTGTVFYNPAVRTQVGGFHDRYGSRVLRTGNGADFSNGSRSYGRRS 257
Query: 133 DSDGGHQ------------VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
DS+GG + T + +P+D +GC+IG+GG + IR +GA+I I K H
Sbjct: 258 DSEGGPRGPPTHDENGEEIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKAPH 317
Query: 181 LPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
+ + + I G A + AL + L R
Sbjct: 318 DET----GERMFTIMGTAKANETALFLLYENLEAEKMR 351
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 53/109 (48%), Gaps = 13/109 (11%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
Q+T + LV S + G +IGKGGQ V N+R ETG + + K D ++ I+G
Sbjct: 50 QLTLRALVSSKEAGVIIGKGGQNVANLREETGVKAGVSK-----VVQGVYDRVLTITGGC 104
Query: 199 SVVKKALCQIA-SRLHDNPSRS-----QHLLASAIS--NSHSSSGSLVG 239
V +A +A + L P+ S QH I SH+ G+++G
Sbjct: 105 DAVSRAYAVVARALLEGAPAVSMGGVVQHNGTHPIKLLISHNQMGTIIG 153
>gi|345566886|gb|EGX49826.1| hypothetical protein AOL_s00076g710 [Arthrobotrys oligospora ATCC
24927]
Length = 379
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 145/333 (43%), Gaps = 57/333 (17%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV D
Sbjct: 50 TLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGNLDGV---- 105
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
+ AQ + + + G H V +LL+ +Q+G +IG+ G ++
Sbjct: 106 -AKAYAMVAQTLVDSPPGAIPTTPM-------GTHPV--RLLISHNQMGTIIGRQGLKIK 155
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-SQHL 222
+I+ +G ++ + + E LP R +V++ G A +++A+ +I L D+ R + +
Sbjct: 156 HIQDVSGVRM-VAQKEMLPQSTER---IVEVQGSADGIRQAIWEIGKCLVDDWQRGTGTI 211
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY----------GGYKGDTAGDWSRSLY 272
L + S++S G+ P+ + G A GP G + D+S
Sbjct: 212 LYNPAVRSNTSHGTGSSPSVISN--GGAGTSGPTDRFTNERPNRGPVRTGNGTDFSEPSP 269
Query: 273 SAPR--------------------DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S PR ++L ++ S+ P +G +IG+GG+ I++IR+
Sbjct: 270 SFPRRGHSDSTSRASAPAPNTENGEELQTQNISI----PADMVGCIIGRGGSKISEIRKS 325
Query: 313 SGAAIKVDSSSTE--GDDCLITVSSKEFFEDTL 343
SGA I + + + G+ V S + E L
Sbjct: 326 SGARISIAKAPHDDTGERMFTIVGSPQSNEKAL 358
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Query: 126 EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E +R DED +T + +V S + G +IGK G+ V ++R ETG + + K +P
Sbjct: 36 EPVRTDEDY-AQSPLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSK--VVPGV- 91
Query: 186 LRSDELVQISGEASVVKKALCQIASRLHDNP 216
D ++ ++G V KA +A L D+P
Sbjct: 92 --HDRVLTVTGNLDGVAKAYAMVAQTLVDSP 120
>gi|393220213|gb|EJD05699.1| hypothetical protein FOMMEDRAFT_79532 [Fomitiporia mediterranea
MF3/22]
Length = 281
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 91/182 (50%), Gaps = 20/182 (10%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASD 97
G +++ P ++GSIIG+ G +K+++ + +++ E +PGS ERV++V +D
Sbjct: 81 GSRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDASGARLNASEGMLPGSTERVLSVAGVAD 140
Query: 98 ET--------NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSD 149
N + + + + ++ ++ +R L G G T ++ +P+D
Sbjct: 141 AIHIATYYVGNILIECQERMPSSTNSSYRPSNRAPRPPLSG-----GAQSYTQQIYIPND 195
Query: 150 QIGCVIGKGGQIVQNIRSETGAQIRILKDEHL------PSCALRSDELVQISGEASVVKK 203
+GC+IGKGG + IR + +QI+I++ P+ ++ LV I+G+ ++
Sbjct: 196 LVGCIIGKGGSKINEIRHMSASQIKIMEPGVTPPGMSGPAGGTENERLVIITGQPHNIQM 255
Query: 204 AL 205
A+
Sbjct: 256 AV 257
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 61/265 (23%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIGR G+ V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 16 IIGRAGKHVNEIREKSGARVVVSESIPGNPERILNVSGPLD--------------AVSKA 61
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G +IGK G ++ I+ +GA++
Sbjct: 62 FGLIVRRINDEPFDVPSVPGSRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDASGARLN-A 120
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP ++ ++ ++G A + A + + L + Q + S+ ++S+ S
Sbjct: 121 SEGMLPGS---TERVLSVAGVADAIHIATYYVGNILIE----CQERMPSSTNSSYRPSN- 172
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS--SKEFSLRLVCPVAN 294
APR LS ++ ++ ++ P
Sbjct: 173 ------------------------------------RAPRPPLSGGAQSYTQQIYIPNDL 196
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
+G +IGKGG+ IN+IR S + IK+
Sbjct: 197 VGCIIGKGGSKINEIRHMSASQIKI 221
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 77/170 (45%), Gaps = 25/170 (14%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S+ +++ + P + +G +IGK GA I +I+ SGA + G V S
Sbjct: 82 SRAVTIKFMIPNSRMGSIIGKQGAKIKEIQDASGARLNASEGMLPGSTE--RVLSVAGVA 139
Query: 341 DTLSATIEAVVRLQPRCSEKIERDS-----------------GLISFTTRLLVPTSRIGC 383
D + V + C E++ + G S+T ++ +P +GC
Sbjct: 140 DAIHIATYYVGNILIECQERMPSSTNSSYRPSNRAPRPPLSGGAQSYTQQIYIPNDLVGC 199
Query: 384 LIGKGGSIITEMRRLTKANIRIL------PKENLPKIASEDDEMVQISGD 427
+IGKGGS I E+R ++ + I+I+ P + P +E++ +V I+G
Sbjct: 200 IIGKGGSKINEIRHMSASQIKIMEPGVTPPGMSGPAGGTENERLVIITGQ 249
Score = 43.9 bits (102), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IG+ G +N+IR++SGA + V S + ++ VS D +S +VR
Sbjct: 16 IIGRAGKHVNEIREKSGARVVVSESIPGNPERILNVSGP---LDAVSKAFGLIVRRINDE 72
Query: 358 SEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
+ G + T + ++P SR+G +IGK G+ I E++
Sbjct: 73 PFDVPSVPGSRAVTIKFMIPNSRMGSIIGKQGAKIKEIQ 111
>gi|50311087|ref|XP_455567.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644703|emb|CAG98275.1| KLLA0F10703p [Kluyveromyces lactis]
Length = 417
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 131/319 (41%), Gaps = 64/319 (20%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET-NAFED 104
R LC +++ ++G GE V +++ +T ++I + + + G ERV+ V +E AF
Sbjct: 70 RMLCLMKQASKVVGGKGERVNRIKSETNTRINVSDNINGVMERVIFVRGKCEEVARAF-- 127
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
K V R I E D+ ++ + LL+P +GC+IG+ G +
Sbjct: 128 -GKIV------------RAINNE-SDDDSNERSLPLVVNLLIPHHFMGCIIGRQGSRLHE 173
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHL-- 222
I + A++ + + LP + +D ++ ++G A + A I + +N S+ ++
Sbjct: 174 IEDLSAARL-MASPQQLP---MSNDRILSLTGVADAIHIATYYIGQTILENESKLKNKKS 229
Query: 223 -------LASAISNSHS-----SSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRS 270
+ S + N++ S G+ P TP+V Y T ++
Sbjct: 230 VFYHPGPMHSVLVNNYQMYMIYSGGAPTNPQDITPMVAPHQEHHQYHPMDKKTMNRRTKP 289
Query: 271 LYSA----------PRDD-------------LSSKEFSLRLVCP----VAN--IGGVIGK 301
S P D L S LV P + N +G VIGK
Sbjct: 290 PVSKYPIGPQQSLQPYTDMVDSCKHVKIISQLQQSPISPHLVLPQEVFIDNKFVGNVIGK 349
Query: 302 GGAIINQIRQESGAAIKVD 320
GG I QI+Q +G IK++
Sbjct: 350 GGKNIQQIKQSTGCMIKIN 368
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 40/162 (24%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+LR++C + V+G G +N+I+ E+ I V D +
Sbjct: 67 INLRMLCLMKQASKVVGGKGERVNRIKSETNTRINVS--------------------DNI 106
Query: 344 SATIEAVVRLQPRCSE------KIER----------DSGLISFTTRLLVPTSRIGCLIGK 387
+ +E V+ ++ +C E KI R + + LL+P +GC+IG+
Sbjct: 107 NGVMERVIFVRGKCEEVARAFGKIVRAINNESDDDSNERSLPLVVNLLIPHHFMGCIIGR 166
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
GS + E+ L+ A + P++ + +D ++ ++G D
Sbjct: 167 QGSRLHEIEDLSAARLMASPQQ----LPMSNDRILSLTGVAD 204
>gi|195445981|ref|XP_002070572.1| GK10958 [Drosophila willistoni]
gi|194166657|gb|EDW81558.1| GK10958 [Drosophila willistoni]
Length = 578
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 112/258 (43%), Gaps = 34/258 (13%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSKEF 338
+ ++++ P G +IGKGG I +++++GA +K+ S T CLIT S++
Sbjct: 66 YHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEGI 125
Query: 339 FEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGCLIGKGG 389
T+ I +R +P + KI ERD + ++LVP S G +IGKGG
Sbjct: 126 M--TVLDFIMDKIREKPDLTTKIIDAESKQTQERDKQV-----KILVPNSTAGMIIGKGG 178
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-------- 441
+ I +++ + + ++I K PK S + + I GD + K+A ++++
Sbjct: 179 AFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSG 235
Query: 442 --LRANLFDREGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYGSSDLAA 499
L + D G V+ F P ++N + S G GG GS+
Sbjct: 236 TCLNVSYADVSGPVANFNPTGSPYATNQNAINSSTASLNASLNSTLGTSIGGAGSASSVL 295
Query: 500 GDSYGSYGSSQLGGTGSA 517
+ G S LG A
Sbjct: 296 VNGTGINLSLNLGAPNPA 313
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 91/180 (50%), Gaps = 15/180 (8%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
D+ Y + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV + ++
Sbjct: 63 DSTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGST 122
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
+ D F+ + ++I E + ++ D QV K+LVP+ G +IG
Sbjct: 123 EGIMTVLD---FIMDKIREKPDLTTKIIDAESKQTQERD--KQV--KILVPNSTAGMIIG 175
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ I+ E+G+ ++I + P + + I G+ K A I S++ ++P
Sbjct: 176 KGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDP 232
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 84/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K P R + I+G +
Sbjct: 69 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSTEGI 125
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
L I ++ + P
Sbjct: 126 MTVLDFIMDKIREKP--------------------------------------------- 140
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + A ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 141 ----DLTTKIIDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 196
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 197 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|338714774|ref|XP_003363150.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Equus
caballus]
Length = 360
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 123/289 (42%), Gaps = 77/289 (26%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N S
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPTNGGS------------------ 96
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
+S +LRLV P + G +IGK G I +IR
Sbjct: 97 ----------------------------VSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QE--SGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQ-------PRCS 358
+ GA I S + G + +S+ + F + T V +LQ P S
Sbjct: 129 ESPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHAVPFAS 185
Query: 359 EKIER--DSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 186 PSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 234
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 123/293 (41%), Gaps = 66/293 (22%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPTNGGSVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSET--GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH 221
IR GA I L + L +++ + G+ V A ++ Q
Sbjct: 126 EIRESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTSAEV----------TKLQQ 175
Query: 222 LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSS 281
L A+ + S + P A T SS
Sbjct: 176 LSGHAVPFASPSMVPGLDPGAQT-----------------------------------SS 200
Query: 282 KEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
+EF + P IG VIG+ G+ I++IRQ SGA IK+ + + + +T++
Sbjct: 201 QEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTIT 249
>gi|195107855|ref|XP_001998509.1| GI24011 [Drosophila mojavensis]
gi|193915103|gb|EDW13970.1| GI24011 [Drosophila mojavensis]
Length = 574
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 35/204 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSKEF 338
F ++++ P G +IGKGG I +++++GA +K+ S T CLIT S +
Sbjct: 66 FHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGI 125
Query: 339 FEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGCLIGKGG 389
T+ I +R +P + KI ERD + ++LVP S G +IGKGG
Sbjct: 126 M--TVVDFIMDKIREKPDLTTKIIDAESKQAQERDKQV-----KILVPNSTAGMIIGKGG 178
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-------- 441
+ I +++ + + ++I K PK S + + I GD + K+A ++++
Sbjct: 179 AFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSG 235
Query: 442 --LRANLFDREGAVSTFVPV-LPY 462
L + D G V+ F P PY
Sbjct: 236 TCLNVSYADVNGPVANFNPTGSPY 259
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
DT + + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV +
Sbjct: 63 DTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLI---- 118
Query: 97 DETNAFEDGDKFVSPAQDALFKVHD---RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
T + E V D + + D ++I E + ++ D QV K+LVP+ G
Sbjct: 119 --TGSVEGIMTVVDFIMDKIREKPDLTTKIIDAESKQAQERD--KQV--KILVPNSTAGM 172
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+IGKGG ++ I+ E+G+ ++I + P + + I G+ K A I S++
Sbjct: 173 IIGKGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIV 229
Query: 214 DNP 216
++P
Sbjct: 230 EDP 232
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K P R + I+G +
Sbjct: 69 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSVEGI 125
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ I ++ + P
Sbjct: 126 MTVVDFIMDKIREKP--------------------------------------------- 140
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + A ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 141 ----DLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 196
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 197 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|195037250|ref|XP_001990077.1| GH18435 [Drosophila grimshawi]
gi|193894273|gb|EDV93139.1| GH18435 [Drosophila grimshawi]
Length = 569
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 35/204 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEF 338
F ++++ P G +IGKGG I +++++GA +K+ S T CLIT S +
Sbjct: 66 FHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGI 125
Query: 339 FEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGCLIGKGG 389
T+ I +R +P + KI ERD + ++LVP S G +IGKGG
Sbjct: 126 M--TVVDFIMDKIREKPDLTTKIIDAESKQAQERDKQV-----KILVPNSTAGMIIGKGG 178
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-------- 441
+ I +++ + + ++I K PK S + + I GD + K+A ++++
Sbjct: 179 AFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSG 235
Query: 442 --LRANLFDREGAVSTFVPV-LPY 462
L + D G V+ F P PY
Sbjct: 236 TCLNVSYADVNGPVANFNPTGSPY 259
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
DT + + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV +
Sbjct: 63 DTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLI---- 118
Query: 97 DETNAFEDGDKFVSPAQDALFKVHD---RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
T + E V D + + D ++I E + ++ D QV K+LVP+ G
Sbjct: 119 --TGSVEGIMTVVDFIMDKIREKPDLTTKIIDAESKQAQERD--KQV--KILVPNSTAGM 172
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+IGKGG ++ I+ E+G+ ++I + P + + I G+ K A I S++
Sbjct: 173 IIGKGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIV 229
Query: 214 DNP 216
++P
Sbjct: 230 EDP 232
Score = 47.4 bits (111), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K P R + I+G +
Sbjct: 69 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSVEGI 125
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ I ++ + P
Sbjct: 126 MTVVDFIMDKIREKP--------------------------------------------- 140
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + A ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 141 ----DLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 196
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 197 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|195388678|ref|XP_002053006.1| GJ23641 [Drosophila virilis]
gi|194151092|gb|EDW66526.1| GJ23641 [Drosophila virilis]
Length = 574
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 96/204 (47%), Gaps = 35/204 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS-----STEGDDCLITVSSKEF 338
F ++++ P G +IGKGG I +++++GA +K+ S T CLIT S +
Sbjct: 66 FHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSVEGI 125
Query: 339 FEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGCLIGKGG 389
T+ I +R +P + KI ERD + ++LVP S G +IGKGG
Sbjct: 126 M--TVVDFIMDKIREKPDLTTKIIDAESKQAQERDKQV-----KILVPNSTAGMIIGKGG 178
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-------- 441
+ I +++ + + ++I K PK S + + I GD + K+A ++++
Sbjct: 179 AFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSG 235
Query: 442 --LRANLFDREGAVSTFVPV-LPY 462
L + D G V+ F P PY
Sbjct: 236 TCLNVSYADVNGPVANFNPTGSPY 259
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 92/183 (50%), Gaps = 21/183 (11%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
DT + + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV +
Sbjct: 63 DTTFHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLI---- 118
Query: 97 DETNAFEDGDKFVSPAQDALFKVHD---RVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
T + E V D + + D ++I E + ++ D QV K+LVP+ G
Sbjct: 119 --TGSVEGIMTVVDFIMDKIREKPDLTTKIIDAESKQAQERD--KQV--KILVPNSTAGM 172
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
+IGKGG ++ I+ E+G+ ++I + P + + I G+ K A I S++
Sbjct: 173 IIGKGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIV 229
Query: 214 DNP 216
++P
Sbjct: 230 EDP 232
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K P R + I+G +
Sbjct: 69 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSVEGI 125
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ I ++ + P
Sbjct: 126 MTVVDFIMDKIREKP--------------------------------------------- 140
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + A ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 141 ----DLTTKIIDAESKQAQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 196
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 197 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|198458337|ref|XP_002138531.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
gi|198136305|gb|EDY69089.1| GA24337 [Drosophila pseudoobscura pseudoobscura]
Length = 505
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 31/192 (16%)
Query: 275 PRDDLSSK--EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P+D ++ E ++R++ P + G VIGKGG I ++R + AA+ VD S +G + I
Sbjct: 12 PQDQKRNRRNEDTVRILIPSSIAGAVIGKGGQHIQKMRTQYKAAVSVDDS--QGPERTIQ 69
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+S+ + AT+E + + E+ E F RLL+ S GC+IGKGG I
Sbjct: 70 ISAD------IEATLEIITEMLKYFEERDE------DFDVRLLIHQSLAGCVIGKGGQKI 117
Query: 393 TEMR-----RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
E+R R K + P+ D +VQ G +A+ +V+T R
Sbjct: 118 KEIRDRIGCRFLKVFSNVAPQST--------DRVVQTVGKQAQVIEAVREVITLTRDTPI 169
Query: 448 DREGAVSTFVPV 459
+GA+ + P+
Sbjct: 170 --KGAIHNYDPM 179
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
EDTV R L P G++IG+GG+ ++++R K+ + + ++ ER + + ++D
Sbjct: 22 EDTV-RILIPSSIAGAVIGKGGQHIQKMRTQYKAAVSVDDS--QGPERTIQI--SADIEA 76
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E +I E L+ E+ D V +LL+ GCVIGKGGQ
Sbjct: 77 TLE-------------------IITEMLKYFEERDEDFDV--RLLIHQSLAGCVIGKGGQ 115
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
++ IR G + + P +D +VQ G+ + V +A+ ++ + D P
Sbjct: 116 KIKEIRDRIGCRFLKVFSNVAPQS---TDRVVQTVGKQAQVIEAVREVITLTRDTP 168
>gi|449546975|gb|EMD37943.1| hypothetical protein CERSUDRAFT_82176 [Ceriporiopsis subvermispora
B]
Length = 433
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 112/263 (42%), Gaps = 18/263 (6%)
Query: 57 IIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDAL 116
IIG+GG V ++R + +++ + E++PG+ ER++ V D A
Sbjct: 126 IIGKGGSHVNEIREQSGARVVVSESIPGNPERILNVSGPLD--------------AVSKA 171
Query: 117 FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL 176
F + R I +E G VT K ++P+ ++G VIGKGG ++ I+ +GA++
Sbjct: 172 FGLIVRRINDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARLN-A 230
Query: 177 KDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGS 236
+ LP R ++ +SG A + A I + L + R S+ S S
Sbjct: 231 SEGMLPGSTER---VLSVSGVADAIHIATYYIGNILIEANERMPSYNNSSYRPSSYSRRP 287
Query: 237 LVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIG 296
G P + Y AP+ + + ++ P +G
Sbjct: 288 PYSGGGGGGGGGGGSSYVPGAAAGAGAGAGGYSNPYQAPQGGPPQQLQTQQIFIPNDLVG 347
Query: 297 GVIGKGGAIINQIRQESGAAIKV 319
+IGKGGA IN+IR S + IK+
Sbjct: 348 CIIGKGGAKINEIRHMSASQIKI 370
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 298 VIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRC 357
+IGKGG+ +N+IR++SGA + V S + ++ VS D +S +VR R
Sbjct: 126 IIGKGGSHVNEIREQSGARVVVSESIPGNPERILNVSGP---LDAVSKAFGLIVR---RI 179
Query: 358 S-EKIERDS--GLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
+ E ++ S G + T + ++P SR+G +IGKGG+ I E++ + A +
Sbjct: 180 NDEPFDKPSVPGSRAVTIKFMIPNSRMGSVIGKGGTKIKEIQDASGARL 228
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 10/99 (10%)
Query: 141 TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-------EHLPSCA-LRSDELV 192
T ++ +P+D +GC+IGKGG + IR + +QI+I++ P+ A + LV
Sbjct: 336 TQQIFIPNDLVGCIIGKGGAKINEIRHMSASQIKIMEPGATAVGMNGAPAPAGGEGERLV 395
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH 231
I+G+ + ++ A+ + RL + + L A SH
Sbjct: 396 VITGQPANIQMAVQLLYHRLEQ--EKQKQLRAQQTGASH 432
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 26/36 (72%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
T ++ +P +GC+IGKGG+ I E+R ++ + I+I+
Sbjct: 336 TQQIFIPNDLVGCIIGKGGAKINEIRHMSASQIKIM 371
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+ + L+ + +IGKGG V IR ++GA R++ E +P R ++ +SG
Sbjct: 112 IHMRCLIVTQDASIIIGKGGSHVNEIREQSGA--RVVVSESIPGNPER---ILNVSGPLD 166
Query: 200 VVKKALCQIASRLHDNP 216
V KA I R++D P
Sbjct: 167 AVSKAFGLIVRRINDEP 183
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASD 97
+++ P ++GS+IG+GG +K+++ + +++ E +PGS ERV++V +D
Sbjct: 198 KFMIPNSRMGSVIGKGGTKIKEIQDASGARLNASEGMLPGSTERVLSVSGVAD 250
>gi|413949911|gb|AFW82560.1| hypothetical protein ZEAMMB73_842471 [Zea mays]
Length = 418
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+K+G+IIG GE VK+L +T++ +RI + E+ V ++ E D+ + P
Sbjct: 116 KKVGAIIGHKGERVKRLCEETRACVRIIGGHLCAAEQAVIIFGR-------EQLDEPLPP 168
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A DAL +V+ + I + D + + ++L PS+Q +IG+ G ++ +I +
Sbjct: 169 AMDALLRVYQQTINND---SLDVGPDNVIVRQILAPSEQAASLIGEHGVMINSIMEASQT 225
Query: 172 QIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH 231
IR+L +E LPS ++ L I PS + L S S
Sbjct: 226 DIRVLGNE-LPS---------------DLIDTLLKWI-------PSNDEELRLRLSSRST 262
Query: 232 SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
++ + V A+ P+ AP +G + ++ G + ++Y P
Sbjct: 263 ATPHASVAAFASAPVSHTAPWLGKFIAFEPFNVGGFDWAIYFYP 306
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/136 (21%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQ 354
+G +IG G + ++ +E+ A +++ + + + +E ++ L ++A++R+
Sbjct: 118 VGAIIGHKGERVKRLCEETRACVRIIGGHLCAAEQAVIIFGREQLDEPLPPAMDALLRVY 177
Query: 355 PRCSEKIERDSGLISFTTR-LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKE---- 409
+ D G + R +L P+ + LIG+ G +I + ++ +IR+L E
Sbjct: 178 QQTINNDSLDVGPDNVIVRQILAPSEQAASLIGEHGVMINSIMEASQTDIRVLGNELPSD 237
Query: 410 ----NLPKIASEDDEM 421
L I S D+E+
Sbjct: 238 LIDTLLKWIPSNDEEL 253
>gi|326930374|ref|XP_003211322.1| PREDICTED: far upstream element-binding protein 3-like [Meleagris
gallopavo]
Length = 554
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 88/158 (55%), Gaps = 15/158 (9%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
+ P + +G IIGRGGE + +++I++ KI+I G ER V + + E+
Sbjct: 68 FKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPC-VLTGTPES------- 119
Query: 107 KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
+ A+ L ++ DR G + G+ ++L+P+ ++G VIGKGG+ ++ ++
Sbjct: 120 --IEQAKRLLGQIVDR--CRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQ 175
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
TG ++ +++D +P+ A D+ ++I+G+A V++A
Sbjct: 176 ERTGVKMIMIQDGPMPTGA---DKPLRITGDAFKVQQA 210
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 77/162 (47%), Gaps = 20/162 (12%)
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSKEFFEDTLSATI 347
P +G +IG+GG I++I+ ESG I++ DS C++T + + +I
Sbjct: 70 VPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLTGTPE---------SI 120
Query: 348 EAVVRLQPRCSEKIERDSGLI------SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
E RL + ++ G S +L+P S++G +IGKGG I +++ T
Sbjct: 121 EQAKRLLGQIVDRCRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGV 180
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+ ++ +P A D+ ++I+GD + A V+ +R
Sbjct: 181 KMIMIQDGPMPTGA---DKPLRITGDAFKVQQAREMVLEIIR 219
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 120/290 (41%), Gaps = 57/290 (19%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T+ L P K+G +IG+GGE +KQL+ T K+ + + P + + +D+
Sbjct: 149 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGP--------MPTGADKPLRI 200
Query: 103 EDGDKF-VSPAQDALFKV---HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
GD F V A++ + ++ D+ +R D S G + ++ VP +G VIG+
Sbjct: 201 -TGDAFKVQQAREMVLEIIREKDQADFRGVRNDFSSRMGGG-SIEVSVPRFAVGIVIGRN 258
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G++++ I+++ G +I+ D+ + + + Q+ G L D
Sbjct: 259 GEMIKKIQNDAGVRIQFKPDD-----GISPERVAQVMG---------------LPDRCQH 298
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
+ H+++ I + G G A +G GDWS ++
Sbjct: 299 AAHIISELILTAQERDG--FGSLAVA-------------RGRGRGRGDWSVGTPGGMQE- 342
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P G VIGKGG I I Q+SGA +++ + D
Sbjct: 343 -------ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD 385
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/145 (20%), Positives = 64/145 (44%), Gaps = 13/145 (8%)
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITV 333
+D+ ++ P + +G VIGKGG I Q+++ +G + + D G D + +
Sbjct: 141 HNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGADKPLRI 200
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL-------LVPTSRIGCLIG 386
+ F + ++R + + + R+ F++R+ VP +G +IG
Sbjct: 201 TGDAFKVQQAREMVLEIIREKDQADFRGVRN----DFSSRMGGGSIEVSVPRFAVGIVIG 256
Query: 387 KGGSIITEMRRLTKANIRILPKENL 411
+ G +I +++ I+ P + +
Sbjct: 257 RNGEMIKKIQNDAGVRIQFKPDDGI 281
>gi|224116388|ref|XP_002317285.1| predicted protein [Populus trichocarpa]
gi|222860350|gb|EEE97897.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 73/112 (65%), Gaps = 7/112 (6%)
Query: 347 IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRIL 406
+EA++ LQ + +++ + G RLLV + IGC+IGKGGS I E+R+ T A++RI
Sbjct: 3 VEAILLLQGKINDEDDDTVG-----CRLLVLSKVIGCIIGKGGSTINEIRKRTNADVRI- 56
Query: 407 PKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF-DREGAVSTFV 457
K P A +DE+V++ G++ +DAL+Q++ RLR ++ +++G +++ V
Sbjct: 57 SKGAKPNCADSNDELVEVVGEVSSVRDALVQIVLRLRDDVLKEKDGGLNSLV 108
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
DED D V +LLV S IGC+IGKGG + IR T A +RI K P+CA +DE
Sbjct: 15 DEDDD---TVGCRLLVLSKVIGCIIGKGGSTINEIRKRTNADVRISKGAK-PNCADSNDE 70
Query: 191 LVQISGEASVVKKALCQIASRLHDN 215
LV++ GE S V+ AL QI RL D+
Sbjct: 71 LVEVVGEVSSVRDALVQIVLRLRDD 95
>gi|410924031|ref|XP_003975485.1| PREDICTED: uncharacterized protein LOC101068273 [Takifugu rubripes]
Length = 652
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 83/401 (20%), Positives = 157/401 (39%), Gaps = 86/401 (21%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P + P +G IIGRGGE + +L+ ++ KI+I G +R VT+ +
Sbjct: 89 PRSVSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTGLPES- 147
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ A+ L ++ ++ +DG ++++P+ + G VIGKGG
Sbjct: 148 ---------IQTAKRLLTEIVEK--GRPAPAFNPNDGPGMTVQEIMIPASKAGLVIGKGG 196
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ +++++ G ++ +++D + A D+ ++ISGE V++A + + D R
Sbjct: 197 ETIKSLQERAGVKMVMIQDGPQNTGA---DKPLRISGEPFKVQQAKEMVMDLIRDQGFRE 253
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
Q G Y GD
Sbjct: 254 QR-----------------------------------GEYGSRVGGD------------- 265
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV----SS 335
SL + P +G VIG+ G +I +I+ ++G I+ D + + +
Sbjct: 266 -----SLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGSTPDRIAQIMGPPNQ 320
Query: 336 KEFFEDTLSATIEAV----------VRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
+ D ++ + +V R + + + + GL FT VPT + G +I
Sbjct: 321 AQHAADIITDLLRSVQAGGPPGGGRGRGRGQGNWNMGPPGGLQEFT--FTVPTVKTGLII 378
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
GKGG I + + + A I + + N P + +M + G
Sbjct: 379 GKGGETIKGISQQSGARIEL--QRNPPPNSDPSIKMFTVRG 417
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 85/176 (48%), Gaps = 26/176 (14%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S+EF + P +G +IG+GG I++++QESG I++ S D +T++
Sbjct: 93 SEEFKV----PDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMPDRSVTLTG----- 143
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFT---------TRLLVPTSRIGCLIGKGGSI 391
L +I+ RL +E +E+ +F +++P S+ G +IGKGG
Sbjct: 144 --LPESIQTAKRL---LTEIVEKGRPAPAFNPNDGPGMTVQEIMIPASKAGLVIGKGGET 198
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
I ++ +A ++++ ++ P+ D + +ISG+ + A VM +R F
Sbjct: 199 IKSLQE--RAGVKMVMIQDGPQNTGADKPL-RISGEPFKVQQAKEMVMDLIRDQGF 251
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 110/302 (36%), Gaps = 69/302 (22%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP TV + P K G +IG+GGE +K L+ K+ V +
Sbjct: 173 GPGMTVQEIMIPASKAGLVIGKGGETIKSLQERAGVKM-------------VMIQDGPQN 219
Query: 99 TNAFE----DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLL---VPSDQI 151
T A + G+ F Q A V D + + R ++ + G +V L VP +
Sbjct: 220 TGADKPLRISGEPFK--VQQAKEMVMDLIRDQGFR-EQRGEYGSRVGGDSLDVPVPRFAV 276
Query: 152 GCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
G VIG+ G++++ I+++TG +I+ D+ D + QI G + + A I
Sbjct: 277 GIVIGRNGEMIKKIQNDTGVRIQFKPDD-----GSTPDRIAQIMGPPNQAQHAADIITDL 331
Query: 212 LHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
L + + MGP GG
Sbjct: 332 LRSVQAGGPPGGGRGRGRGQGNWN-----------------MGPPGGL------------ 362
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLI 331
+EF+ P G +IGKGG I I Q+SGA I++ + D I
Sbjct: 363 ----------QEFT--FTVPTVKTGLIIGKGGETIKGISQQSGARIELQRNPPPNSDPSI 410
Query: 332 TV 333
+
Sbjct: 411 KM 412
>gi|312079928|ref|XP_003142383.1| hypothetical protein LOAG_06799 [Loa loa]
Length = 440
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 55/272 (20%)
Query: 22 GP-NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG- 79
GP K+ + D D + + L P +G++IG+GGE ++ L+ ++ ++++
Sbjct: 18 GPATKKAHVSDTEDNIV------QVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSK 71
Query: 80 --ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG 137
E PG+ ER+ V K S + KV D VI E++R D++
Sbjct: 72 NQEVYPGTNERICLVKG------------KIAS-----VLKVSD-VILEKIREKVDNNTP 113
Query: 138 HQV----------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
+ KL+VP+ G VIGK G ++ IR +TGA I++ +
Sbjct: 114 SDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVS 173
Query: 188 SDELVQISGEA-SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPI 246
+ ++ I+ E V+ AL ++ ++ +P QH +A+ + S G P
Sbjct: 174 QERIITIAAEQDEVLMDALQRVLEKVAADP---QHAMATIPDHKDDSFG---------PA 221
Query: 247 VGIAPLMGPYGGYKGDTAG--DWSRSLYSAPR 276
G+ L G GG +G T D+S +AP+
Sbjct: 222 SGL--LHGIGGGVQGQTIQPFDFSNRSQNAPQ 251
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 92/186 (49%), Gaps = 26/186 (13%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEFFE 340
++++ P A +G +IGKGG + ++ ESG +++ + T CL+ +
Sbjct: 36 VKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLV--------K 87
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISF---------TTRLLVPTSRIGCLIGKGGSI 391
+++ ++ + + EK++ ++ F +L+VP + G +IGK G+
Sbjct: 88 GKIASVLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGAR 147
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD-LAKDALIQVMTRLRANLFDRE 450
I E+R T ANI++ PK + + ++ I+ + D + DAL +V+ ++ A D +
Sbjct: 148 IKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAA---DPQ 204
Query: 451 GAVSTF 456
A++T
Sbjct: 205 HAMATI 210
>gi|351697928|gb|EHB00847.1| RNA-binding protein Nova-2 [Heterocephalus glaber]
Length = 320
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 29 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 88
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 89 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 145
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
V+ + ++GA +++ + P + +V +SGE V KA+ I +L
Sbjct: 146 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKL 193
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 119/276 (43%), Gaps = 67/276 (24%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+L+PS G +IGKGGQ + ++ ETGA I++ K + P ++ + + G A +
Sbjct: 29 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT---TERVCLVQGTAEAL 85
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
IA ++ + P Q + + N ++ P
Sbjct: 86 NAVHSFIAEKVREIP---QAMTKPEVVN----------------------ILQPQTTMNP 120
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D A +L+ P + G +IGKGGA + + ++SGA +++ S
Sbjct: 121 DRAKQ-------------------AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL-S 160
Query: 322 SSTEGDDC---LITVSSK-EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVP 377
EG + ++TVS + E +SA ++ +L ++++ + VP
Sbjct: 161 QKPEGINLQERVVTVSGEPEQVHKAVSAIVQ---KLAAESAKEL----------VEIAVP 207
Query: 378 TSRIGCLIGKGGSIITEMRRLTKANIRILPK-ENLP 412
+ +G ++GKGG + E + LT A I+I K E LP
Sbjct: 208 ENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 243
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 88/177 (49%), Gaps = 19/177 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 25 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 84
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 85 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 142
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRAN 445
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +L A
Sbjct: 143 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKLAAE 196
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 33/185 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPG--SEERVVTVYSASDETNAFE 103
+ + P G IIG+GG VK + + + +++ + G +ERVVTV ++
Sbjct: 127 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQ----- 181
Query: 104 DGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
VH V I ++L + + ++ VP + +G ++GKGG+
Sbjct: 182 ---------------VHKAVSAIVQKLAAESAKE-----LVEIAVPENLVGAILGKGGKT 221
Query: 162 VQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQ 220
+ + TGA+I+I K E LP R V I+G + + A I+ R+ Q
Sbjct: 222 LVEYQELTGARIQISKKGEFLPGTRNRR---VTITGSPAATQAAQYLISQRVTYEQGVFQ 278
Query: 221 HLLAS 225
LL S
Sbjct: 279 TLLFS 283
>gi|339242773|ref|XP_003377312.1| poly(rC)-binding protein 3 [Trichinella spiralis]
gi|316973900|gb|EFV57443.1| poly(rC)-binding protein 3 [Trichinella spiralis]
Length = 410
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 33/168 (19%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGE-TVPGSEERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ + +KI I + T P ER+VT+ +
Sbjct: 49 KEVGSIIGK-----------SMAKINISDGTCP---ERIVTITGSVQ------------- 81
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
A D FK+ + E+ + DS +T +L+VP+ Q GC+IG+GG +++IR TG
Sbjct: 82 -AIDTAFKMICKKFEEDQQQIPDSVPKPPITFRLIVPATQCGCLIGRGGSKIKDIREATG 140
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
A I++ E LP+ R+ V +SG A + + + QI L ++P +
Sbjct: 141 ASIQV-ASEMLPNSTERA---VTLSGTAEAIIQCMNQICLILLESPPK 184
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 259 YKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK 318
Y +T GD S+ L S S ++RL+ +G +IGK A IN I
Sbjct: 15 YSSNTMGDTSQPLLSNSTPPNLSLVQTIRLLMQGKEVGSIIGKSMAKINISDGTCPERIV 74
Query: 319 VDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPT 378
+ S + D + K+F ED ++I T RL+VP
Sbjct: 75 TITGSVQAIDTAFKMICKKFEED----------------QQQIPDSVPKPPITFRLIVPA 118
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQV 438
++ GCLIG+GGS I ++R T A+I++ E LP + + V +SG +A+IQ
Sbjct: 119 TQCGCLIGRGGSKIKDIREATGASIQVA-SEMLP---NSTERAVTLSG----TAEAIIQC 170
Query: 439 MTRLRANLFDR--EGAVSTF--VPVLPYIPVSENGS 470
M ++ L + +GA+ + +P +P++ S N S
Sbjct: 171 MNQICLILLESPPKGAIVPYRPIPSIPFL-CSNNAS 205
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV 92
+R + P + G +IGRGG +K +R T + I++ E +P S ER VT+
Sbjct: 112 FRLIVPATQCGCLIGRGGSKIKDIREATGASIQVASEMLPNSTERAVTL 160
>gi|405977635|gb|EKC42074.1| Poly(rC)-binding protein 3 [Crassostrea gigas]
Length = 439
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 88/168 (52%), Gaps = 23/168 (13%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFEDGDKFVS 110
+++GSIIG+ G+ +K+ R D+ +KI I + GS ER+VTV ++ +
Sbjct: 21 KEVGSIIGKKGDNIKKFREDSGAKINISD---GSCPERIVTVTGTTECIHKA-------- 69
Query: 111 PAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETG 170
F + + E+L+ + + VT +L+VP+ Q G +IGKGG ++ IR TG
Sbjct: 70 ------FTMICKKFEEDLQ-NTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETTG 122
Query: 171 AQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
A I++ E LP+ R+ V +SG A + + I S + ++P +
Sbjct: 123 ASIQV-ASEMLPNSTERA---VTVSGTADAITLCIQNICSIMLESPPK 166
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 76/164 (46%), Gaps = 32/164 (19%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS--------TEGDD 328
D + ++R++ +G +IGK G I + R++SGA I + S T +
Sbjct: 5 DSVPVSLLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGSCPERIVTVTGTTE 64
Query: 329 CL---ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLI 385
C+ T+ K+F ED ++ P + T RL+VP S+ G LI
Sbjct: 65 CIHKAFTMICKKFEED---------LQNTPTVPKP--------PVTLRLVVPASQCGSLI 107
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
GKGGS I E+R T A+I++ E LP + + V +SG D
Sbjct: 108 GKGGSKIKEIRETTGASIQVA-SEMLP---NSTERAVTVSGTAD 147
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
++ +P+D IGC+IG+GGQ + IR +GA I+I E D V I+G +
Sbjct: 273 EMAIPNDLIGCIIGRGGQKINEIRQMSGAMIKISNAEE-----GAPDRKVTITGTPETIG 327
Query: 203 KA--LCQIASRLHD----NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPY 256
A L + LH +PS S +++ S + P + + + P++ Y
Sbjct: 328 LAQYLINTSMELHKTLTLDPSSSTQNTTPTLTSVQSQHAPMAIPISQ---LAMKPMIVGY 384
Query: 257 GGYKG 261
G G
Sbjct: 385 NGLNG 389
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 26 RRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPG 84
+++ D ++ + R + P + GS+IG+GG +K++R T + I++ E +P
Sbjct: 75 KKFEEDLQNTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETTGASIQVASEMLPN 134
Query: 85 SEERVVTVYSASD 97
S ER VTV +D
Sbjct: 135 STERAVTVSGTAD 147
>gi|308798891|ref|XP_003074225.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
gi|116000397|emb|CAL50077.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
Length = 402
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 113/250 (45%), Gaps = 47/250 (18%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYS--ASD---E 98
V+R LC ++G +IGR G+ V+ + +T +++++ + ER V +++ A D +
Sbjct: 17 VFRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDGPGD 76
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEE------------------------LRGDEDS 134
T A +G + V + R + E+ + G +
Sbjct: 77 TCAAREGARRV-----VRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLG 131
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSE-TGAQIRILKDEHLPSCALRSDELVQ 193
VT +LLVP+ Q G +IGKGG+ +Q +R GA + + + +P CA D +V+
Sbjct: 132 RSTAHVTLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVPPCATSEDRVVE 191
Query: 194 ISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSH-----SSSGSLVGPTAATPI-V 247
I G+ V+ A + L D +L+ S++ + + +G+ VG AT + +
Sbjct: 192 IHGKPKDVRVAADAVFESLKD------YLVDSSVLGHYQPTVAAPAGANVGDVGATAMGI 245
Query: 248 GIAPLMGPYG 257
G P+ P G
Sbjct: 246 GNHPMSAPMG 255
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 84/191 (43%), Gaps = 39/191 (20%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DT 342
R++C +GG+IG+ G + I E+GA +KV +S+ + + + + + DT
Sbjct: 18 FRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDGPGDT 77
Query: 343 LSATIEA--VVRLQPRCSEKIE----------------------------RDSG--LISF 370
+A A VVR R E +D G
Sbjct: 78 CAAREGARRVVRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLGRSTAHV 137
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMR-RLTKANIRILPKENLPKIASEDDEMVQISG--- 426
T RLLVP + G LIGKGG I E+R R A++ + +P A+ +D +V+I G
Sbjct: 138 TLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQVPPCATSEDRVVEIHGKPK 197
Query: 427 DLDLAKDALIQ 437
D+ +A DA+ +
Sbjct: 198 DVRVAADAVFE 208
>gi|444519891|gb|ELV12903.1| Poly(rC)-binding protein 3 [Tupaia chinensis]
Length = 300
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 122/272 (44%), Gaps = 36/272 (13%)
Query: 67 QLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAE 126
+L + KS RI + ER+VT+ +D F + A A +K + +I
Sbjct: 17 RLLMHGKSGARINISEGNCPERIVTITGPTDAI--------FKAFAMIA-YKFEEDIINS 67
Query: 127 ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCAL 186
+ + VT +L+VP+ Q G +IGKGG ++ IR TGAQ+++ D LP+
Sbjct: 68 --MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGD-MLPNSTE 124
Query: 187 RSDELVQISGEASVVKKALCQIASRLHDNPSR------------SQHLLASAISNSHSSS 234
R+ V ISG + + + QI + ++P + + + A + +
Sbjct: 125 RA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQ 181
Query: 235 GSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
++ P T + +A P+ G T + P D S + L P
Sbjct: 182 YAIPHPDQLTKLHQLAMQQTPFPPL-GQTNPAF-------PGLDASPPASTHELTIPNDL 233
Query: 295 IGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
IG +IG+ G IN+IRQ SGA IK+ +++TEG
Sbjct: 234 IGCIIGRQGTKINEIRQMSGAQIKI-ANATEG 264
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 51/180 (28%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI-GETVPGSEERVVTVYSASDET---- 99
R + P + GS+IG+GG +K++R T +++++ G+ +P S ER VT+ D
Sbjct: 81 LRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTERAVTISGTPDAIIQCV 140
Query: 100 ---------------------------------NAFEDGDKFVSPAQDALFKVHDRVIAE 126
A+ ++ P D L K+H + +
Sbjct: 141 KQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQ 200
Query: 127 E-----------LRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
G + S T +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 201 TPFPPLGQTNPAFPGLDASPPAS--THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 258
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
T RL+VP S+ G LIGKGGS I E+R T A +++ + LP + + V ISG
Sbjct: 79 VTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISG--- 131
Query: 430 LAKDALIQVMTRLRANLFDR--EGAVSTFVPVLPYIPVSENGSDGLNYESRDSKRH 483
DA+IQ + ++ + + +GA + P PV G + + + H
Sbjct: 132 -TPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH 186
>gi|384248088|gb|EIE21573.1| hypothetical protein COCSUDRAFT_17393 [Coccomyxa subellipsoidea
C-169]
Length = 311
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 155/356 (43%), Gaps = 65/356 (18%)
Query: 17 DYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKI 76
+ D P + D+ G + + ++L GSIIG+GG + +L+ + +++
Sbjct: 16 EVKDDAPAEVEEKEPGADEGTAGEQKVIAKFLMSNAAAGSIIGKGGANISELQSQSGARL 75
Query: 77 ---RIGETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDED 133
R E PG++ERV+ AS N L +H +I +++G++
Sbjct: 76 QLSRASEFFPGTQERVML---ASGSVN-------------QVLTALH--LILTKIQGEQS 117
Query: 134 --SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
+ G +LLVP+ G +IGKGG +++ ++ A I + + P D +
Sbjct: 118 MMARDGKSTQLRLLVPTPLCGAIIGKGGATIRSFAEDSRAAITVSPQDKQPLGI--PDRV 175
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V+I+G + +A+ + ++L ++P+ ++ + S+ S
Sbjct: 176 VRITGAQDQLLRAVALLLTKLVESPNYTR------FTTSNVS------------------ 211
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
GP + G + + Y P+ + + + P A +G +IGKGG +I+Q++
Sbjct: 212 -YGPPPQHMG-----YQQKGYMQPQQQ---QRMEVTVPVPEARVGAIIGKGGEVISQLKS 262
Query: 312 ESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL 367
G I++ ++ DD + +++ T+S +AV Q +KI + + L
Sbjct: 263 VIGVKIRI----SDRDDFVPGTRNRKV---TISGAADAVQIAQVLIHQKINQAATL 311
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 144/371 (38%), Gaps = 111/371 (29%)
Query: 112 AQDALFKVHDRVIAE----ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRS 167
A+ A +V D AE E DE + G +V AK L+ + G +IGKGG + ++S
Sbjct: 10 AKLADLEVKDDAPAEVEEKEPGADEGTAGEQKVIAKFLMSNAAAGSIIGKGGANISELQS 69
Query: 168 ETGAQIRILK-DEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
++GA++++ + E P R ++ SG + V AL HL+ +
Sbjct: 70 QSGARLQLSRASEFFPGTQER---VMLASGSVNQVLTAL---------------HLILTK 111
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSL 286
I S +M RD S++ L
Sbjct: 112 IQGEQS-------------------MMA---------------------RDGKSTQ---L 128
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG----DDCLITVSSKEFFEDT 342
RL+ P G +IGKGGA I ++S AAI V + D + +++
Sbjct: 129 RLLVPTPLCGAIIGKGGATIRSFAEDSRAAITVSPQDKQPLGIPDRVVRITGAQDQLLRA 188
Query: 343 LSATIEAVVR----------------------------LQPRCSEKIERDSGLISFTTRL 374
++ + +V +QP+ +++E +
Sbjct: 189 VALLLTKLVESPNYTRFTTSNVSYGPPPQHMGYQQKGYMQPQQQQRME---------VTV 239
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
VP +R+G +IGKGG +I++++ + IRI +++ + + V ISG D + A
Sbjct: 240 PVPEARVGAIIGKGGEVISQLKSVIGVKIRISDRDDF--VPGTRNRKVTISGAADAVQIA 297
Query: 435 LIQVMTRLRAN 445
QV+ + N
Sbjct: 298 --QVLIHQKIN 306
>gi|432101641|gb|ELK29690.1| RNA-binding protein Nova-2 [Myotis davidii]
Length = 294
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSASDETNAF 102
+ L P GSIIG+GG+ + QL+ +T + I++ ++ PG+ ERV V ++ NA
Sbjct: 44 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEALNAV 103
Query: 103 EDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
F++ + + + + L+ + AKL+VP+ G +IGKGG
Sbjct: 104 HS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGAT 160
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
V+ + ++GA +++ + P + +V +SGE V KA+ I +L
Sbjct: 161 VKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKL 208
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 117/275 (42%), Gaps = 65/275 (23%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVK 202
K+L+PS G +IGKGGQ + ++ ETGA I++ K + LVQ G A +
Sbjct: 44 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ--GTAEALN 101
Query: 203 KALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
IA ++ + P Q + + N ++ P D
Sbjct: 102 AVHSFIAEKVREIP---QAMTKPEVVN----------------------ILQPQTTMNPD 136
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
A +L+ P + G +IGKGGA + + ++SGA +++ S
Sbjct: 137 RAKQ-------------------AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL-SQ 176
Query: 323 STEGDDC---LITVSSK-EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPT 378
EG + ++TVS + E +SA ++ +L ++++ + VP
Sbjct: 177 KPEGINLQERVVTVSGEPEQVHKAVSAIVQ---KLAAESAKEL----------VEIAVPE 223
Query: 379 SRIGCLIGKGGSIITEMRRLTKANIRILPK-ENLP 412
+ +G ++GKGG + E + LT A I+I K E LP
Sbjct: 224 NLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 258
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 88/176 (50%), Gaps = 19/176 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 40 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 99
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 100 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 157
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRA 444
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +L A
Sbjct: 158 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKLAA 210
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 65/142 (45%), Gaps = 30/142 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPG--SEERVVTVYSASDETNAFE 103
+ + P G IIG+GG VK + + + +++ + G +ERVVTV ++
Sbjct: 142 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQ----- 196
Query: 104 DGDKFVSPAQDALFKVHDRV--IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
VH V I ++L + + ++ VP + +G ++GKGG+
Sbjct: 197 ---------------VHKAVSAIVQKLAAESAKE-----LVEIAVPENLVGAILGKGGKT 236
Query: 162 VQNIRSETGAQIRILKD-EHLP 182
+ + TGA+I+I K E LP
Sbjct: 237 LVEYQELTGARIQISKKGEFLP 258
>gi|169775165|ref|XP_001822050.1| RNA-binding protein rnc1 [Aspergillus oryzae RIB40]
gi|238496215|ref|XP_002379343.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|83769913|dbj|BAE60048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694223|gb|EED50567.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|391872927|gb|EIT82002.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 357
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 133/299 (44%), Gaps = 58/299 (19%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T +
Sbjct: 46 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGPLQGT 99
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L + ++ + G ++G H V +LL+ +Q+G +IG+ G +++I
Sbjct: 100 ARAYALVAKGLLEGAPQM---GMGGVVSNNGTHPV--RLLISHNQMGTIIGRSGLKIKHI 154
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLAS 225
+ +G ++ + + E LP R +V++ G ++KA+ +I L D+ R
Sbjct: 155 QDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIEKAVWEIGKCLIDDWQR------- 203
Query: 226 AISNSHSSSGSLVGPTAATPIVGIAPLMG---------PY-------------GGYKGDT 263
+G+++ A VG AP+ PY GGY +
Sbjct: 204 -------GTGTILYNPAVRASVGTAPVNQNVGNGYSSRPYNRTGNGADFSDQSGGYGRRS 256
Query: 264 AGDWSRSLYSAPRDD---LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D S Y +D + ++ S+ P +G +IG+ G+ I +IR+ SGA I +
Sbjct: 257 NPDTSNRGYPLVTEDGEEIQTQNISI----PADMVGCIIGRAGSKITEIRRSSGARISI 311
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+ G + IR +GA+I I K H + + + I
Sbjct: 271 DGEEIQTQNISIPADMVGCIIGRAGSKITEIRRSSGARISIAKAPHDDT----GERMFTI 326
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 327 MGSAQANEKALYLLYENLEAEKTRRSQL 354
>gi|357437527|ref|XP_003589039.1| Far upstream element-binding protein [Medicago truncatula]
gi|355478087|gb|AES59290.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 88/161 (54%), Gaps = 18/161 (11%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDGD 106
P ++G IIG+GGE +K L++ + +KI++ + P S R+V + SD A +
Sbjct: 119 PNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSD---AIATAE 175
Query: 107 KFVSPAQDALFKVH---DRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
K + ++ L + + ++ + G +D + +P++++G +IGKGG+ ++
Sbjct: 176 KLI---KEVLAEAESGGNGLVTRRMTGQGGAD-----EFSMKIPNNKVGLIIGKGGETIK 227
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
++++ TGA+I+++ HLP ++ ++I G + ++ A
Sbjct: 228 SMQATTGARIQVIP-LHLPPGDTSTERTLKIEGTSEQIESA 267
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 29/196 (14%)
Query: 269 RSLYSAPRD--DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
+S Y+AP S + S ++ P +G +IGKGG I ++ +SGA I+V
Sbjct: 95 KSQYAAPMSIPSYSHQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTR----- 149
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI-ERDSGLISFTTR------------ 373
D S E L+ T +A+ + E + E +SG TR
Sbjct: 150 DMDADPNSPNRLVE--LTGTSDAIATAEKLIKEVLAEAESGGNGLVTRRMTGQGGADEFS 207
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG---DLDL 430
+ +P +++G +IGKGG I M+ T A I+++P +LP + + ++I G ++
Sbjct: 208 MKIPNNKVGLIIGKGGETIKSMQATTGARIQVIPL-HLPPGDTSTERTLKIEGTSEQIES 266
Query: 431 AK---DALIQVMTRLR 443
AK D+++ RLR
Sbjct: 267 AKQLVDSILSGENRLR 282
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 83/184 (45%), Gaps = 55/184 (29%)
Query: 138 HQVTAKLL-VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQIS 195
HQ ++K + +P+ ++G +IGKGG+ ++ ++ ++GA+I++ +D + P+ R LV+++
Sbjct: 109 HQGSSKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNR---LVELT 165
Query: 196 GEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
G + + A + L+ ++ + S LV
Sbjct: 166 GTSDAIATA---------------EKLIKEVLAEAESGGNGLV----------------- 193
Query: 256 YGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGA 315
+R + + EFS+++ P +G +IGKGG I ++ +GA
Sbjct: 194 ------------TRRM----TGQGGADEFSMKI--PNNKVGLIIGKGGETIKSMQATTGA 235
Query: 316 AIKV 319
I+V
Sbjct: 236 RIQV 239
>gi|57525224|ref|NP_001006199.1| far upstream element-binding protein 3 [Gallus gallus]
gi|53127676|emb|CAG31167.1| hypothetical protein RCJMB04_2o21 [Gallus gallus]
Length = 539
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 88/158 (55%), Gaps = 15/158 (9%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
+ P + +G IIGRGGE + +++I++ KI+I G ER V + + E+
Sbjct: 100 FKVPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERP-CVLTGTPES------- 151
Query: 107 KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
+ A+ L ++ DR G + G+ ++L+P+ ++G VIGKGG+ ++ ++
Sbjct: 152 --IEQAKRLLGQIVDR--CRNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQ 207
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
TG ++ +++D +P+ A D+ ++I+G+A V++A
Sbjct: 208 ERTGVKMIMIQDGPMPTGA---DKPLRITGDAFKVQQA 242
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 8/156 (5%)
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSKEFFEDTLSATI 347
P +G +IG+GG I++I+ ESG I++ DS C++T + E E
Sbjct: 102 VPDKMVGFIIGRGGEQISRIQIESGCKIQIAPDSGGMPERPCVLT-GTPESIEQAKRLLG 160
Query: 348 EAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILP 407
+ V R R D S +L+P S++G +IGKGG I +++ T + ++
Sbjct: 161 QIVDRC--RNGPGFHNDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQ 218
Query: 408 KENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+P A D+ ++I+GD + A V+ +R
Sbjct: 219 DGPMPTGA---DKPLRITGDAFKVQQAREMVLEIIR 251
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 120/290 (41%), Gaps = 57/290 (19%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T+ L P K+G +IG+GGE +KQL+ T K+ + + P + + +D+
Sbjct: 181 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGP--------MPTGADKPLRI 232
Query: 103 EDGDKF-VSPAQDALFKV---HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
GD F V A++ + ++ D+ +R D S G + ++ VP +G VIG+
Sbjct: 233 -TGDAFKVQQAREMVLEIIREKDQADFRGVRNDFSSRMGGG-SIEVSVPRFAVGIVIGRN 290
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G++++ I+++ G +I+ D+ + + + Q+ G L D
Sbjct: 291 GEMIKKIQNDAGVRIQFKPDD-----GISPERVAQVMG---------------LPDRCQH 330
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
+ H+++ I + G G A +G GDWS ++
Sbjct: 331 AAHIISELILTAQERDG--FGSLAVA-------------RGRGRGRGDWSVGTPGGMQE- 374
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P G VIGKGG I I Q+SGA +++ + D
Sbjct: 375 -------ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNTD 417
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 29/144 (20%), Positives = 64/144 (44%), Gaps = 13/144 (9%)
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVS 334
+D+ ++ P + +G VIGKGG I Q+++ +G + + D G D + ++
Sbjct: 174 NDVDGNSTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPMPTGADKPLRIT 233
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRL-------LVPTSRIGCLIGK 387
F + ++R + + + R+ F++R+ VP +G +IG+
Sbjct: 234 GDAFKVQQAREMVLEIIREKDQADFRGVRN----DFSSRMGGGSIEVSVPRFAVGIVIGR 289
Query: 388 GGSIITEMRRLTKANIRILPKENL 411
G +I +++ I+ P + +
Sbjct: 290 NGEMIKKIQNDAGVRIQFKPDDGI 313
>gi|393909303|gb|EJD75396.1| hypothetical protein LOAG_17442 [Loa loa]
Length = 585
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 120/272 (44%), Gaps = 55/272 (20%)
Query: 22 GP-NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG- 79
GP K+ + D D + + L P +G++IG+GGE ++ L+ ++ ++++
Sbjct: 40 GPATKKAHVSDTEDNIV------QVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSK 93
Query: 80 --ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGG 137
E PG+ ER+ V K S + KV D VI E++R D++
Sbjct: 94 NQEVYPGTNERICLVKG------------KIAS-----VLKVSD-VILEKIREKVDNNTP 135
Query: 138 HQV----------TAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALR 187
+ KL+VP+ G VIGK G ++ IR +TGA I++ +
Sbjct: 136 SDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVS 195
Query: 188 SDELVQISGEA-SVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPI 246
+ ++ I+ E V+ AL ++ ++ +P QH +A+ + S G P
Sbjct: 196 QERIITIAAEQDEVLMDALQRVLEKVAADP---QHAMATIPDHKDDSFG---------PA 243
Query: 247 VGIAPLMGPYGGYKGDTAG--DWSRSLYSAPR 276
G+ L G GG +G T D+S +AP+
Sbjct: 244 SGL--LHGIGGGVQGQTIQPFDFSNRSQNAPQ 273
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/230 (23%), Positives = 105/230 (45%), Gaps = 35/230 (15%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEFFE 340
++++ P A +G +IGKGG + ++ ESG +++ + T CL+ +
Sbjct: 58 VKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLV--------K 109
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISF---------TTRLLVPTSRIGCLIGKGGSI 391
+++ ++ + + EK++ ++ F +L+VP + G +IGK G+
Sbjct: 110 GKIASVLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGAR 169
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD-LAKDALIQVMTRLRANLFDRE 450
I E+R T ANI++ PK + + ++ I+ + D + DAL +V+ ++ A D +
Sbjct: 170 IKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQRVLEKVAA---DPQ 226
Query: 451 GAVST--------FVPVLPYIPVSENGSDGLNYESRD-SKRHGRGPPYGG 491
A++T F P + G G + D S R P +GG
Sbjct: 227 HAMATIPDHKDDSFGPASGLLHGIGGGVQGQTIQPFDFSNRSQNAPQFGG 276
>gi|256078999|ref|XP_002575779.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043990|emb|CCD81536.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 334
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET--------NA 101
P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ + +
Sbjct: 106 PDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDHAKQMIGDI 163
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E K +P A + G T +++VP + G VIGK G+
Sbjct: 164 IERAGKNGTPTTPAY-----------------NSTGSITTIEMMVPGLKAGLVIGKNGET 206
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLHDNPS 217
++N++ E G ++ +++ + P+ D+ ++ISGE + V+KA L I SR D P
Sbjct: 207 IKNLQEENGVKMVLIQQSNNPTP---EDKPLRISGEPARVEKARQAVLVLINSR--DRPG 261
Query: 218 RSQH 221
S H
Sbjct: 262 GSMH 265
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 111/287 (38%), Gaps = 81/287 (28%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+ +S G VT + +P +G VIGKGG+ + ++++T +++I S A +
Sbjct: 90 NNNSVGSRVVTTETAIPDRYVGLVIGKGGEQITQLQNDTQCKVQI-------SQAGTPER 142
Query: 191 LVQISGEASVV---KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIV 247
V ++G + K+ + I R N + + +++S+GS+
Sbjct: 143 TVTLTGTPQQIDHAKQMIGDIIERAGKN--------GTPTTPAYNSTGSIT--------- 185
Query: 248 GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIIN 307
++ ++ P G VIGK G I
Sbjct: 186 -------------------------------------TIEMMVPGLKAGLVIGKNGETIK 208
Query: 308 QIRQESGAA---IKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERD 364
+++E+G I+ ++ T D L E A + V + R +R
Sbjct: 209 NLQEENGVKMVLIQQSNNPTPEDKPLRISGEPARVEKARQAVL---VLINSR-----DRP 260
Query: 365 SGLISF------TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
G + + T++ VP + G +IGKGG I E+ R++ A++ I
Sbjct: 261 GGSMHYGYDGQETSQYAVPAEKAGLVIGKGGESIKEICRVSGAHVEI 307
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 24/143 (16%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 185 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPT--P 229
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 230 EDKPLRISGEPARVEKARQAVLV--LINSRDRPGGSMHYGYDGQETSQYAVPAEKAGLVI 287
Query: 156 GKGGQIVQNIRSETGAQIRILKD 178
GKGG+ ++ I +GA + I K+
Sbjct: 288 GKGGESIKEICRVSGAHVEISKE 310
>gi|148226696|ref|NP_001080123.1| poly(rC) binding protein 3 [Xenopus laevis]
gi|27370875|gb|AAH41241.1| Pcbp2b protein [Xenopus laevis]
Length = 353
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 31/180 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-DKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS +SS V
Sbjct: 60 TLAGPTNAIFKAFSMIIDKLEED-------ISSSMTNSTASSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 270 DASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 311
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + +D +T++
Sbjct: 270 DASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTIT 326
>gi|260064185|gb|ACX30053.1| MIP13670p [Drosophila melanogaster]
Length = 346
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 95/204 (46%), Gaps = 35/204 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKEF 338
+ ++++ P G +IGKGG I +++++GA +K+ S T CLIT S++
Sbjct: 146 YHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAI 205
Query: 339 FEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGCLIGKGG 389
+ I +R +P + KI ERD + ++LVP S G +IGKGG
Sbjct: 206 M--VVMEFIMDKIREKPDLTNKIVDTDSKQTQERDKQV-----KILVPNSTAGMIIGKGG 258
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-------- 441
+ I +++ + + ++I K P S + + I GD + K+A ++++
Sbjct: 259 AFIKQIKEESGSYVQISQK---PTDVSLQERCITIIGDKENNKNACKMILSKIVEDPQSG 315
Query: 442 --LRANLFDREGAVSTFVPV-LPY 462
L + D G V+ F P PY
Sbjct: 316 TCLNVSYADVSGPVANFNPTGSPY 339
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 93/180 (51%), Gaps = 15/180 (8%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
+T Y + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV + +
Sbjct: 143 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLI---T 199
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
T A +F+ + ++++ + + ++ D QV K+LVP+ G +IG
Sbjct: 200 GSTEAIMVVMEFIMDKIREKPDLTNKIVDTDSKQTQERD--KQV--KILVPNSTAGMIIG 255
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ I+ E+G+ ++I + P+ + + I G+ K A I S++ ++P
Sbjct: 256 KGGAFIKQIKEESGSYVQISQK---PTDVSLQERCITIIGDKENNKNACKMILSKIVEDP 312
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 84/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K P R + I+G +
Sbjct: 149 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSTEAI 205
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
+ I ++ + P
Sbjct: 206 MVVMEFIMDKIREKP--------------------------------------------- 220
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 221 ----DLTNKIVDTDSKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 276
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
T+ + C+ + KE ++ + +V
Sbjct: 277 KPTDVSLQERCITIIGDKENNKNACKMILSKIVE 310
>gi|432911382|ref|XP_004078652.1| PREDICTED: uncharacterized protein LOC101169884 [Oryzias latipes]
Length = 666
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/396 (20%), Positives = 156/396 (39%), Gaps = 88/396 (22%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
+ P +G IIGRGGE + +++ ++ KI+I G ER VT+ D A
Sbjct: 103 FKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMPERSVTLTGPQDSIQA----- 157
Query: 107 KFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIR 166
A+ L ++ ++ +DG +++VP+ + G VIGKGG+ +++++
Sbjct: 158 -----AKRLLSEIVEK--GRPAPAFHHNDGPGMTVQEIMVPASKAGLVIGKGGETIKSLQ 210
Query: 167 SETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASA 226
G ++ +++D + A D+ ++ISGE V++A + + + R Q
Sbjct: 211 ERAGVKMVMIQDGPQNTGA---DKPLRISGEPFKVQQAKEMVMELIREQGFREQR----- 262
Query: 227 ISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSL 286
G YG G + L
Sbjct: 263 ---------------------------GEYGSRIGGES---------------------L 274
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV----SSKEFFEDT 342
+ P +G VIG+ G +I +I+ ++G I+ D + + + D
Sbjct: 275 DVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGSAPDRIAQIMGPPDQAQHAADI 334
Query: 343 LSATIEAV------------VRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGS 390
++ + +V R + + + + GL FT VPT + G +IGKGG
Sbjct: 335 IADLLRSVQSGGPPGHGGGRGRGRGQGNWNMGPPGGLQEFT--FTVPTMKTGLIIGKGGE 392
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
I + + + A I + + N P + + +M + G
Sbjct: 393 TIKGISQQSGARIEL--QRNPPPNSDPNIKMFTVRG 426
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 87/177 (49%), Gaps = 26/177 (14%)
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
SS+EF + P +G +IG+GG I++I+QESG I++ S + +T++ +
Sbjct: 99 SSEEFKV----PDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGMPERSVTLTGPQ-- 152
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGLISF---------TTRLLVPTSRIGCLIGKGGS 390
+I+A RL SE +E+ +F ++VP S+ G +IGKGG
Sbjct: 153 -----DSIQAAKRL---LSEIVEKGRPAPAFHHNDGPGMTVQEIMVPASKAGLVIGKGGE 204
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
I ++ +A ++++ ++ P+ D + +ISG+ + A VM +R F
Sbjct: 205 TIKSLQE--RAGVKMVMIQDGPQNTGADKPL-RISGEPFKVQQAKEMVMELIREQGF 258
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 117/303 (38%), Gaps = 69/303 (22%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP TV + P K G +IG+GGE +K L+ K+ V +
Sbjct: 180 GPGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKM-------------VMIQDGPQN 226
Query: 99 TNAFE----DGDKF-VSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGC 153
T A + G+ F V A++ + ++ E RG+ S G + + + VP +G
Sbjct: 227 TGADKPLRISGEPFKVQQAKEMVMELIREQGFREQRGEYGSRIGGE-SLDVPVPRFAVGI 285
Query: 154 VIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
VIG+ G++++ I+++TG +I+ D+ D + QI G
Sbjct: 286 VIGRNGEMIKKIQNDTGVRIQFKPDD-----GSAPDRIAQIMGP---------------- 324
Query: 214 DNPSRSQH---LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRS 270
P ++QH ++A + + S G MGP GG
Sbjct: 325 --PDQAQHAADIIADLLRSVQSGGPPGHGGGRGRGRGQGNWNMGPPGGL----------- 371
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
+EF+ P G +IGKGG I I Q+SGA I++ + D
Sbjct: 372 -----------QEFT--FTVPTMKTGLIIGKGGETIKGISQQSGARIELQRNPPPNSDPN 418
Query: 331 ITV 333
I +
Sbjct: 419 IKM 421
>gi|356514579|ref|XP_003525983.1| PREDICTED: uncharacterized protein LOC100797476 [Glycine max]
Length = 554
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV---PGSEERVVTVYSASDETNAFEDG 105
P ++G IIG+GGE +K L++ + +KI+I + P S R V + + A
Sbjct: 90 IPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTVELMGTPE---AISSA 146
Query: 106 DKFVSPAQDALFKVHDR---VIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIV 162
+K ++ + L + ++ G SD + +P++++G +IGKGG+ +
Sbjct: 147 EKLIN---EVLAEAESGGSGIVTRRFTGQAGSD-----EFVMKIPNNKVGLIIGKGGETI 198
Query: 163 QNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
+N+++ TGA+I+++ HLP ++ ++I G ++ A
Sbjct: 199 KNMQASTGARIQVIP-LHLPPGDTSTERTLKIDGTPEQIESA 239
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 26/190 (13%)
Query: 269 RSLYSA--PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG 326
+ LYSA P + S ++ P +G +IGKGG I ++ +SGA I++ T
Sbjct: 67 KPLYSASPPPVSYGHQGSSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQI----TRD 122
Query: 327 DDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI-ERDSGLISFTTR------------ 373
D S++ L T EA+ + +E + E +SG TR
Sbjct: 123 IDADPNSSTRTV---ELMGTPEAISSAEKLINEVLAEAESGGSGIVTRRFTGQAGSDEFV 179
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG---DLDL 430
+ +P +++G +IGKGG I M+ T A I+++P +LP + + ++I G ++
Sbjct: 180 MKIPNNKVGLIIGKGGETIKNMQASTGARIQVIPL-HLPPGDTSTERTLKIDGTPEQIES 238
Query: 431 AKDALIQVMT 440
AK + QV++
Sbjct: 239 AKQLVYQVIS 248
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 137 GHQVTAKLL-VPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQI 194
GHQ ++K + +P+ ++G +IGKGG+ ++ ++ ++GA+I+I +D + P+ + R+ EL+
Sbjct: 80 GHQGSSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTVELMGT 139
Query: 195 SGEASVVKKALCQI 208
S +K + ++
Sbjct: 140 PEAISSAEKLINEV 153
>gi|194903195|ref|XP_001980824.1| GG16798 [Drosophila erecta]
gi|190652527|gb|EDV49782.1| GG16798 [Drosophila erecta]
Length = 572
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 47/210 (22%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSK-- 336
+ ++++ P G +IGKGG I +++++GA +K+ S T CLIT S++
Sbjct: 66 YHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAI 125
Query: 337 ----EFFEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGC 383
EF D +R +P + KI ERD + ++LVP S G
Sbjct: 126 MVVLEFIMDK--------IREKPDLTNKIVDAESKQTQERDKQV-----KILVPNSTAGM 172
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-- 441
+IGKGG+ I +++ + + ++I K PK S + + I GD + K+A ++++
Sbjct: 173 IIGKGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIV 229
Query: 442 --------LRANLFDREGAVSTFVPV-LPY 462
L + D G V+ F P PY
Sbjct: 230 EDPQSGTCLNVSYADVSGPVANFNPTGSPY 259
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
+T Y + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV + +
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLI---T 119
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
T A +F+ + ++++ E + ++ D QV K+LVP+ G +IG
Sbjct: 120 GSTEAIMVVLEFIMDKIREKPDLTNKIVDAESKQTQERD--KQV--KILVPNSTAGMIIG 175
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ I+ E+G+ ++I + P + + I G+ K A I S++ ++P
Sbjct: 176 KGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDP 232
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 84/214 (39%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K P R + I+G +
Sbjct: 69 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSTEAI 125
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
L I ++ + P
Sbjct: 126 MVVLEFIMDKIREKP--------------------------------------------- 140
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + A ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 141 ----DLTNKIVDAESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 196
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 197 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|147901405|ref|NP_001084264.1| poly(rC) binding protein 2 [Xenopus laevis]
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]
Length = 353
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 31/180 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-DKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS +SS V
Sbjct: 60 TLAGPTNAIFKAFSMIIDKLEED-------ISSSMTNSTASSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 311
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + +D +T++
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTIT 326
>gi|53749712|ref|NP_001005451.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
gi|49250542|gb|AAH74565.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89266917|emb|CAJ82240.1| novel protein similar to poly(rC) binding protein 2 [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 31/180 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-DKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS +SS V
Sbjct: 60 TLAGPTNAIFKAFSMIIDKLEED-------ISSSMTNSTASSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 311
Score = 39.7 bits (91), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + +D +T++
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTIT 326
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 31/174 (17%)
Query: 52 RKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKFVSP 111
+++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 23 KEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------------- 66
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKGGQIVQN 164
A+FK +I ++L D S + VT +L+VP+ Q G +IGKGG ++
Sbjct: 67 ---AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKE 122
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 123 IRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|76157738|gb|AAX28573.2| SJCHGC01935 protein [Schistosoma japonicum]
Length = 263
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 20/178 (11%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ +
Sbjct: 94 GPRVVTTETAIPDRFVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQ 151
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGK 157
+ A+ + + +R + G T +++VP + G VIGK
Sbjct: 152 ----------IDHAKQMIGDIIERAGKNGTPTTTTYNSTGSITTIEMMVPGLKAGLVIGK 201
Query: 158 GGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASR 211
G+ ++N++ E G ++ +++ + P+ D+ ++ISGE S V+KA L I SR
Sbjct: 202 NGETIKNLQEENGVKMVLIQQSNNPTP---EDKPLRISGEPSRVEKARQAVLVLINSR 256
>gi|195486812|ref|XP_002091665.1| GE12124 [Drosophila yakuba]
gi|194177766|gb|EDW91377.1| GE12124 [Drosophila yakuba]
Length = 497
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 31/192 (16%)
Query: 275 PRDDLSSK--EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P+D ++ E ++R++ P + G VIGKGG I ++R + A + VD S +G + I
Sbjct: 12 PQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQ 69
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+S+ E TL E + + ERD F RLL+ S GC+IGKGG I
Sbjct: 70 ISAD--IESTLEIITEMLKYFE-------ERDE---DFDVRLLIHQSLAGCVIGKGGQKI 117
Query: 393 TEMR-----RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
E+R R K + P+ D +VQ G DA+ +V+T R
Sbjct: 118 KEIRDRIGCRFLKVFSNVAPQST--------DRVVQTVGKQSQVIDAVREVITLTRDTPI 169
Query: 448 DREGAVSTFVPV 459
+GA+ + P+
Sbjct: 170 --KGAIHNYDPM 179
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+TV R L P G++IG+GG+ ++++R K+ + + ++ ER + + ++D +
Sbjct: 22 EETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQI--SADIES 76
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E +I E L+ E+ D V +LL+ GCVIGKGGQ
Sbjct: 77 TLE-------------------IITEMLKYFEERDEDFDV--RLLIHQSLAGCVIGKGGQ 115
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
++ IR G + + P +D +VQ G+ S V A+ ++ + D P
Sbjct: 116 KIKEIRDRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIDAVREVITLTRDTP 168
>gi|195499424|ref|XP_002096942.1| GE25952 [Drosophila yakuba]
gi|194183043|gb|EDW96654.1| GE25952 [Drosophila yakuba]
Length = 572
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 97/210 (46%), Gaps = 47/210 (22%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSK-- 336
+ ++++ P G +IGKGG I +++++GA +K+ S T CLIT S++
Sbjct: 66 YHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLITGSTEAI 125
Query: 337 ----EFFEDTLSATIEAVVRLQPRCSEKI---------ERDSGLISFTTRLLVPTSRIGC 383
EF D +R +P + KI ERD + ++LVP S G
Sbjct: 126 MVVLEFIMDK--------IREKPDLTNKIVDVESKQTQERDKQV-----KILVPNSTAGM 172
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTR-- 441
+IGKGG+ I +++ + + ++I K PK S + + I GD + K+A ++++
Sbjct: 173 IIGKGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIV 229
Query: 442 --------LRANLFDREGAVSTFVPV-LPY 462
L + D G V+ F P PY
Sbjct: 230 EDPQSGTCLNVSYADVSGPVANFNPTGSPY 259
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 92/180 (51%), Gaps = 15/180 (8%)
Query: 42 DTVY--RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET---VPGSEERVVTVYSAS 96
+T Y + L P G+IIG+GGE + L+ DT +++++ ++ PG+ ERV + +
Sbjct: 63 ETTYHMKILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTERVCLI---T 119
Query: 97 DETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIG 156
T A +F+ + ++++ E + ++ D QV K+LVP+ G +IG
Sbjct: 120 GSTEAIMVVLEFIMDKIREKPDLTNKIVDVESKQTQERD--KQV--KILVPNSTAGMIIG 175
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
KGG ++ I+ E+G+ ++I + P + + I G+ K A I S++ ++P
Sbjct: 176 KGGAFIKQIKEESGSYVQISQK---PKDVSLQERCITIIGDKENNKNACKMILSKIVEDP 232
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 83/214 (38%), Gaps = 56/214 (26%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALRSDELVQISGEASVV 201
K+LVP+ G +IGKGG+ + +++ +TGA++++ K P R + I+G +
Sbjct: 69 KILVPAVASGAIIGKGGETIASLQKDTGARVKMSKSHDFYPGTTER---VCLITGSTEAI 125
Query: 202 KKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKG 261
L I ++ + P
Sbjct: 126 MVVLEFIMDKIREKP--------------------------------------------- 140
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
D + + ++ ++++ P + G +IGKGGA I QI++ESG+ +++
Sbjct: 141 ----DLTNKIVDVESKQTQERDKQVKILVPNSTAGMIIGKGGAFIKQIKEESGSYVQISQ 196
Query: 322 SSTE---GDDCLITVSSKEFFEDTLSATIEAVVR 352
+ + C+ + KE ++ + +V
Sbjct: 197 KPKDVSLQERCITIIGDKENNKNACKMILSKIVE 230
>gi|194881635|ref|XP_001974928.1| GG22043 [Drosophila erecta]
gi|190658115|gb|EDV55328.1| GG22043 [Drosophila erecta]
Length = 498
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 89/192 (46%), Gaps = 31/192 (16%)
Query: 275 PRDDLSSK--EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P+D ++ E ++R++ P + G VIGKGG I ++R + A + VD S +G + I
Sbjct: 12 PQDQKRNRRNEETVRILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQ 69
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
+S+ E TL E + + ERD F RLL+ S GC+IGKGG I
Sbjct: 70 ISAD--IESTLEIITEMLKYFE-------ERDE---DFDVRLLIHQSLAGCVIGKGGQKI 117
Query: 393 TEMR-----RLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLF 447
E+R R K + P+ D +VQ G DA+ +V+T R
Sbjct: 118 KEIRDRIGCRFLKVFSNVAPQST--------DRVVQTVGKQSQVIDAVREVITLTRDTPI 169
Query: 448 DREGAVSTFVPV 459
+GA+ + P+
Sbjct: 170 --KGAIHNYDPM 179
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 82/176 (46%), Gaps = 29/176 (16%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
E+TV R L P G++IG+GG+ ++++R K+ + + ++ ER + + ++D +
Sbjct: 22 EETV-RILIPSSIAGAVIGKGGQHIQKMRTQYKATVSVDDS--QGPERTIQI--SADIES 76
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
E +I E L+ E+ D V +LL+ GCVIGKGGQ
Sbjct: 77 TLE-------------------IITEMLKYFEERDEDFDV--RLLIHQSLAGCVIGKGGQ 115
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
++ IR G + + P +D +VQ G+ S V A+ ++ + D P
Sbjct: 116 KIKEIRDRIGCRFLKVFSNVAPQS---TDRVVQTVGKQSQVIDAVREVITLTRDTP 168
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 31/181 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 26 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 75
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 76 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 125
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 126 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 181
Query: 219 S 219
S
Sbjct: 182 S 182
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 75
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 76 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 102
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 103 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 142
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 23 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERII-------TL 70
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 71 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 130
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 131 EIRESTGAQVQV 142
>gi|391325297|ref|XP_003737175.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Metaseiulus occidentalis]
Length = 323
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 86/169 (50%), Gaps = 22/169 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R+L P ++ G+IIG+ G+ + +LR K+ + + G ER++
Sbjct: 38 RFLIPSQRAGAIIGKSGKQIVELRSTFNCKLVVPDCE-GVPERLM--------------- 81
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
V +D L ++ V+ + ++ ++G ++ KLL+ + +IGKGG +++I
Sbjct: 82 --LVRVNKDLLPQLISSVVQKITANEDATNGKNRAEMKLLLHQKEAVALIGKGGARIKDI 139
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
R +T A I+I +C L SD++V+I+G A VV +A+ + L +
Sbjct: 140 REKTQAAIKIFDK----TCPLSSDKVVRITGSADVVTEAIRTVCEALEN 184
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
+ LR + P G +IGK G I ++R + V + ++ +K+ +
Sbjct: 35 WDLRFLIPSQRAGAIIGKSGKQIVELRSTFNCKLVVPDCEGVPERLMLVRVNKDLLPQLI 94
Query: 344 SATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANI 403
S+ ++ + + + +G +LL+ LIGKGG+ I ++R T+A I
Sbjct: 95 SSVVQKITANE-------DATNGKNRAEMKLLLHQKEAVALIGKGGARIKDIREKTQAAI 147
Query: 404 RILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRL 442
+I K D++V+I+G D+ +A+ V L
Sbjct: 148 KIFDK----TCPLSSDKVVRITGSADVVTEAIRTVCEAL 182
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 31/181 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S 219
S
Sbjct: 173 S 173
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERII-------TL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 275 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 329
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 330 ITGSAASISLAQYLINVRL 348
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 275 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 331
>gi|328708265|ref|XP_001949890.2| PREDICTED: far upstream element-binding protein 1-like
[Acyrthosiphon pisum]
Length = 767
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 128/324 (39%), Gaps = 59/324 (18%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
P T + + P K+G IIG+GGE +K L+ + +K+ + + P S+E + S ET
Sbjct: 201 PAFTQAQIMIPGAKVGLIIGKGGETIKMLQESSGAKMIVIQDGPNSQENEKPL-RISGET 259
Query: 100 NAFEDGDKFVSPAQDAL---------FKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQ 150
E K V D L F + GD G+ ++ VP
Sbjct: 260 AKVEHAKKLVY---DMLGGDKDGSSNFDQNGSNWNGSNSGDYSMHSGYGGKVEVGVPKQV 316
Query: 151 IGCVIGKGGQIVQNIRSETGAQIRILK-DEHLPSCALRSDELVQISGEASVVKKALCQIA 209
+G VIGKGG +++ I+++TGA+++ + +E P D I+G V +A +I
Sbjct: 317 VGLVIGKGGDMIKKIQADTGAKVQFINLNEDTP-----DDRRCLITGNPDQVAEAKQRIE 371
Query: 210 SRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
S L+ SA++ S + G + W
Sbjct: 372 S-----------LVDSALNRSGNRQSGGGGGGGGN----------------FNRNQSWGN 404
Query: 270 SLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDC 329
S + P ++ + P A G +IGKGG I QI ++GA ++D
Sbjct: 405 SGQTQPLNETT-------FTVPSAKCGVIIGKGGETIKQINMQTGAHCEIDRRHNN---- 453
Query: 330 LITVSSKEFFEDTLSATIEAVVRL 353
T S K F + IE R+
Sbjct: 454 --TGSEKTFVIRGTTEQIENAKRM 475
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 86/394 (21%), Positives = 167/394 (42%), Gaps = 89/394 (22%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGDKF 108
P + +G + RGG + +L+ +T KI++ PG ER T+ + +
Sbjct: 116 VPDKMVG--LSRGGGQISRLQAETGCKIQMAPDSPGLLERSCTLTGNA----------QS 163
Query: 109 VSPAQDALFKVHDRVIAEELRGDEDSDGGH---------QVTAKLLVPSDQIGCVIGKGG 159
++ A++ + + ++ E G +G + A++++P ++G +IGKGG
Sbjct: 164 ITLAKELIQNIVQNKVSVEGTGGAKIEGLNISSPPSQPAFTQAQIMIPGAKVGLIIGKGG 223
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ ++ +GA++ +++D + +++ ++ISGE + V+ A + L + S
Sbjct: 224 ETIKMLQESSGAKMIVIQDG---PNSQENEKPLRISGETAKVEHAKKLVYDMLGGDKDGS 280
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDD 278
+ +GS + G +GD+S S Y
Sbjct: 281 SNF---------DQNGS---------------------NWNGSNSGDYSMHSGYGG---- 306
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIK-VDSSSTEGDD--CLITVSS 335
+ + P +G VIGKGG +I +I+ ++GA ++ ++ + DD CLIT +
Sbjct: 307 ------KVEVGVPKQVVGLVIGKGGDMIKKIQADTGAKVQFINLNEDTPDDRRCLITGNP 360
Query: 336 KEFFEDTLSATIEAVV-----RLQPRCSEKIER------------DSGLIS--FTTRLLV 376
+ E IE++V R R S +SG T V
Sbjct: 361 DQVAE--AKQRIESLVDSALNRSGNRQSGGGGGGGGNFNRNQSWGNSGQTQPLNETTFTV 418
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
P+++ G +IGKGG I ++ T A+ I + N
Sbjct: 419 PSAKCGVIIGKGGETIKQINMQTGAHCEIDRRHN 452
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 76/165 (46%), Gaps = 22/165 (13%)
Query: 287 RLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVS--------SK 336
+++ P A +G +IGKGG I +++ SGA + V D +++ ++ + +S +K
Sbjct: 207 QIMIPGAKVGLIIGKGGETIKMLQESSGAKMIVIQDGPNSQENEKPLRISGETAKVEHAK 266
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT------RLLVPTSRIGCLIGKGGS 390
+ D L + S +SG S + + VP +G +IGKGG
Sbjct: 267 KLVYDMLGGDKDGSSNFDQNGSNWNGSNSGDYSMHSGYGGKVEVGVPKQVVGLVIGKGGD 326
Query: 391 IITEMRRLTKANIRILP-KENLPKIASEDDEMVQISGDLDLAKDA 434
+I +++ T A ++ + E+ P DD I+G+ D +A
Sbjct: 327 MIKKIQADTGAKVQFINLNEDTP-----DDRRCLITGNPDQVAEA 366
>gi|54037961|gb|AAH84195.1| Pcbp2 protein [Xenopus laevis]
Length = 353
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 92/180 (51%), Gaps = 31/180 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFSMII-DKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G + + + QI + ++P +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGIPQSIIECVKQICVVMLESPPK 172
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVT--AKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS +SS V
Sbjct: 60 TLAGPTNAIFKAFSMIIDKLEED-------ISSSMTNSTASSKPPV-------------- 98
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
+LRLV P + G +IGKGG I +IR+
Sbjct: 99 --------------------------------TLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI 175
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 311
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 278 DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
D S++ S L P IG +IG+ GA IN+IRQ SGA IK+ + +D +T++
Sbjct: 270 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDRQVTIT 326
>gi|449669385|ref|XP_002157937.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Hydra magnipapillata]
Length = 549
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 180/432 (41%), Gaps = 65/432 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI----GETVPG-SEERVVTVYS 94
P+ R L P + ++G+GG + ++ +T +KI I G G +E +VT+
Sbjct: 135 PQQYPCRILVPSDMVKVLLGKGGCTITAMQTNTGTKIDIHRDKGPCYRGPCDETIVTIKG 194
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
D + F ++ L + E R D+D + KLL G +
Sbjct: 195 ---------DPESFSKAIREILSAFSNEY---EKR---DTDARKPIQLKLLAHDLLCGRI 239
Query: 155 IGKGGQIVQNIRSETGAQIRILKD-------EHLPSCALRSDELVQISGEASVVKKALCQ 207
IGKGG ++ + E+ I+ + + +P+ + + E V I+ E S+ A+C
Sbjct: 240 IGKGGNNLKQTKQESNVSKLIISNSIYEESSQMIPTGFVCTGERV-ITIEGSL--DAIC- 295
Query: 208 IASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPI-VGIAPLMGP--YGGYKGDTA 264
IA L R +++ A + +++ G G I G P M P YGGY DT
Sbjct: 296 IAESLISKKLR-EYMEKDARNQYNTNMGLYHGAAFGGQINYGYNPQMYPRMYGGYTVDTF 354
Query: 265 G--DWSRSL-------------YSAPRDDLSSKEFSLRLVC---PVANIGGVIGKGGAII 306
G + S+ Y+ P+ F C P +G +IG+ G I
Sbjct: 355 GYPAYPSSMNNYPGILGHGYLPYTPPQQVPYYSNFEPETTCILIPTKEVGAIIGRNGGYI 414
Query: 307 NQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSG 366
++++Q SGA I+V G+ + V + A + + + E ++
Sbjct: 415 SRMKQYSGAQIRVIKGDEGGESKVEIVGPPD-------CQWRASLCVFSKIKETMKVAYS 467
Query: 367 LISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
T +VP S +G +IGK G ++ +++ +A+I + PK+ +D V I+G
Sbjct: 468 EAQLKTEFIVPGSCVGRVIGKKGQVVQDIQDKAQADIEV-PKDK----QGANDVPVYITG 522
Query: 427 DLDLAKDALIQV 438
+ + A+ ++
Sbjct: 523 TFNGTQIAISRI 534
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 25/174 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET 99
PE T L P +++G+IIGR G + +++ + ++IR+ + G E +V
Sbjct: 391 PETTCI--LIPTKEVGAIIGRNGGYISRMKQYSGAQIRVIKGDEGGESKV---------- 438
Query: 100 NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ V P D ++ V ++ + + Q+ + +VP +G VIGK G
Sbjct: 439 -------EIVGPP-DCQWRASLCVFSKIKETMKVAYSEAQLKTEFIVPGSCVGRVIGKKG 490
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLH 213
Q+VQ+I+ + A I + KD+ +D V I+G + + A+ +I +H
Sbjct: 491 QVVQDIQDKAQADIEVPKDKQGA-----NDVPVYITGTFNGTQIAISRIRDIVH 539
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 31/181 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S 219
S
Sbjct: 173 S 173
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + +C R ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG----NCPER---IITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERII-------TL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
>gi|256078993|ref|XP_002575776.1| far upstream (fuse) binding protein [Schistosoma mansoni]
gi|360043993|emb|CCD81539.1| putative far upstream (fuse) binding protein [Schistosoma mansoni]
Length = 356
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 36/184 (19%)
Query: 50 PIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDET--------NA 101
P R +G +IG+GGE + QL+ DT+ K++I + G+ ER VT+ + +
Sbjct: 106 PDRYVGLVIGKGGEQITQLQNDTQCKVQISQA--GTPERTVTLTGTPQQIDHAKQMIGDI 163
Query: 102 FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
E K +P A + G T +++VP + G VIGK G+
Sbjct: 164 IERAGKNGTPTTPAY-----------------NSTGSITTIEMMVPGLKAGLVIGKNGET 206
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA----LCQIASRLHDNPS 217
++N++ E G ++ +++ + P+ D+ ++ISGE + V+KA L I SR D P
Sbjct: 207 IKNLQEENGVKMVLIQQSNNPT---PEDKPLRISGEPARVEKARQAVLVLINSR--DRPG 261
Query: 218 RSQH 221
S H
Sbjct: 262 GSMH 265
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 24/143 (16%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T + P K G +IG+ GE +K L+ + K+ V + +++ T
Sbjct: 185 TTIEMMVPGLKAGLVIGKNGETIKNLQEENGVKM-------------VLIQQSNNPT--P 229
Query: 103 EDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGH-------QVTAKLLVPSDQIGCVI 155
ED +S + K V+ L D GG Q T++ VP+++ G VI
Sbjct: 230 EDKPLRISGEPARVEKARQAVLV--LINSRDRPGGSMHYGYDGQETSQYAVPAEKAGLVI 287
Query: 156 GKGGQIVQNIRSETGAQIRILKD 178
GKGG+ ++ I +GA + I K+
Sbjct: 288 GKGGESIKEICRVSGAHVEISKE 310
>gi|255561653|ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1, putative [Ricinus communis]
Length = 544
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 26/177 (14%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG---ETVPGSEERVVTVYSA 95
G + T R P K+G +IG+GGE +K +++ + +KI+I + P S R V +
Sbjct: 82 GSQGTSKRITIPSGKVGVVIGKGGETIKNIQLQSGAKIQITKDQDADPHSLTRDVELMGT 141
Query: 96 SDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAK--------LLVP 147
S++ + E+ + + VIAE G S H + K + VP
Sbjct: 142 SEQISRAEE--------------LINDVIAETDAGGSASSAVHGLNTKQPGAEQFSIRVP 187
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
+D++G +IGKGG+ ++ ++S +GA+++I+ HLP ++ V I+G ++ A
Sbjct: 188 NDKVGLLIGKGGETIKYMQSRSGARMQIIP-LHLPPGDPTTERTVYINGLTEQIEAA 243
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 32/201 (15%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV------DSSSTEGDDCLITVS 334
S+ S R+ P +G VIGKGG I I+ +SGA I++ D S D L+ S
Sbjct: 83 SQGTSKRITIPSGKVGVVIGKGGETIKNIQLQSGAKIQITKDQDADPHSLTRDVELMGTS 142
Query: 335 -----SKEFFEDTLSAT------IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGC 383
++E D ++ T AV L + G F+ R VP ++G
Sbjct: 143 EQISRAEELINDVIAETDAGGSASSAVHGLN-------TKQPGAEQFSIR--VPNDKVGL 193
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG---DLDLAKDALIQVMT 440
LIGKGG I M+ + A ++I+P +LP + V I+G ++ AK+ + V+
Sbjct: 194 LIGKGGETIKYMQSRSGARMQIIPL-HLPPGDPTTERTVYINGLTEQIEAAKELVNDVLN 252
Query: 441 RLRANLFDREGAVSTFVPVLP 461
R + D G+ S P P
Sbjct: 253 GKR--IIDPTGSSSYGQPTYP 271
>gi|50545305|ref|XP_500190.1| YALI0A18161p [Yarrowia lipolytica]
gi|49646055|emb|CAG84122.1| YALI0A18161p [Yarrowia lipolytica CLIB122]
Length = 385
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 90/343 (26%), Positives = 157/343 (45%), Gaps = 44/343 (12%)
Query: 30 GDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERV 89
GDD Q ++ R L ++ G IIG+ G V LR K K + ++V G +R+
Sbjct: 61 GDDTTQLVL-------RALVSTKEAGVIIGKDGATVAGLRDAAKVKAGVTKSVAGIPDRI 113
Query: 90 VTVYSASDETNAFEDGDKFVSPAQDALFKVHD---RVIAEELRGDEDSDGGHQVTAKLLV 146
++V + + + + A AL H V+ G + + T +LL+
Sbjct: 114 LSVAGTAAGVS------RAIGLAAAALV-AHPPSGYVLNLVPPGPQGT-----TTVRLLI 161
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH-LPSCALRSDELVQISGEASVVKKAL 205
P ++G ++GKGG ++ I+++ G +RI+ +H LP S+ +V+I GE ++ A+
Sbjct: 162 PHQRMGSILGKGGVRIKAIQAKYG--VRIVASKHRLPHS---SERIVEIQGEPLALQTAV 216
Query: 206 CQIASRLHDNPSRSQHLLASAISNSHSSSGSLV--GPTAATPIVGIAPLMGPY--GGYKG 261
+ L + +S + A N S GS+ V A G + GG
Sbjct: 217 YTVVQCLLEEKDKS---ILVAYYNPRSLEGSMTLREDPEDKEYVSFAGYRGRHQDGGSDT 273
Query: 262 DTAGDWSRSLYSAPRDDLSSKEFSLR-LVCPVANIGGVIGKGGAIINQIRQESGAAIKVD 320
DT + + S + + LSS + ++ + P + G +IG+ G I ++R+ SGAAI +
Sbjct: 274 DTDREATVSDHGGDAEALSSSDACVQSTIIPASFAGYIIGRRGDNIRELRKRSGAAISI- 332
Query: 321 SSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER 363
SS E + L+ S+ +A A+ LQ + E+ ER
Sbjct: 333 SSEYERERTLLMRGSE-------AAVALAMSMLQQQMDEERER 368
>gi|302916853|ref|XP_003052237.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733176|gb|EEU46524.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 373
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 136/295 (46%), Gaps = 36/295 (12%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFE 103
R + ++ G IIG+GG+ V LR +T K + + V G +RV+T+ D A
Sbjct: 49 TLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCD---AIS 105
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
V+ A + + A + G S+G H + KLL+ +Q+G +IG+ G ++
Sbjct: 106 RAYAIVARA------LLEGAPAMGMGGIVQSNGTHPI--KLLISHNQMGTIIGRQGLKIK 157
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-SQHL 222
+I+ +G ++ + + E LP R +V++ G +++A+ +I L D+ R + +
Sbjct: 158 HIQDASGVRM-VAQKEMLPQSTER---IVEVQGTPEGIQRAVWEICKCLVDDWQRGTGTV 213
Query: 223 LASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-------GYKGDTAGDWSR------ 269
L + + + +S + VG A G YG G D + SR
Sbjct: 214 LYNPVVRTQPASSTSVGSGGAGYSQGSG--RSEYGSPRVMRTGNGADFSNGSSRPYNRRS 271
Query: 270 ----SLYSAPRDDLSSKEFSLR-LVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
++ P D + +E + + P +G +IG+ G+ I++IR+ SGA I +
Sbjct: 272 DSDAAIRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISI 326
Score = 43.5 bits (101), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 4/90 (4%)
Query: 133 DSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
D +G T + +P+D +GC+IG+ G + IR +GA+I I K H + + +
Sbjct: 284 DENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKAPHDET----GERMF 339
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHL 222
I G A + AL + L R L
Sbjct: 340 TIMGTAKANESALFLLYENLEAEKMRRSQL 369
>gi|67536752|ref|XP_662150.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|40741699|gb|EAA60889.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|259482624|tpe|CBF77283.1| TPA: KH domain RNA-binding protein (AFU_orthologue; AFUA_2G02780)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 132/287 (45%), Gaps = 32/287 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R + ++ G IIG+ G+ V LR +T K + + VPG +RV+TV T A
Sbjct: 230 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTV------TGALSGT 283
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ + L + ++ + G ++G H + +LL+ +Q+G +IG+ G +++I
Sbjct: 284 ARAYALVAKGLLEGAPQM---GMGGIVSNNGTHPI--RLLISHNQMGTIIGRQGLKIKHI 338
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR-SQHLLA 224
+ +G ++ + + E LP ++ +V++ G ++KA+ +I L D+ R + +L
Sbjct: 339 QDASGVRM-VAQKEMLPQS---TERIVEVQGTPEGIEKAIWEIGKCLIDDWQRGTGTILY 394
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAP---------LMGPYGGYKGDTAGDWSRSLYSAP 275
+ S SGS+ + P GGY + D S Y
Sbjct: 395 NPAVRSSVGSGSIQHNGGNSDSYNSRPYNRTGNGADFSDQSGGYGRRSNPDTSNRGYPLV 454
Query: 276 RDD---LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+D + ++ S+ P +G +IG+GG I +IR+ SGA I +
Sbjct: 455 TEDGEEIQTQNISI----PADMVGCIIGRGGTKITEIRRSSGARISI 497
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
DG T + +P+D +GC+IG+GG + IR +GA+I I K H + + + I
Sbjct: 457 DGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKAPHDET----GERMFTI 512
Query: 195 SGEASVVKKALCQIASRLHDNPSRSQHL 222
G A +KAL + L +R L
Sbjct: 513 MGSAQANEKALYLLYENLEAEKTRRSQL 540
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,033,790,269
Number of Sequences: 23463169
Number of extensions: 409824129
Number of successful extensions: 1121692
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1820
Number of HSP's successfully gapped in prelim test: 2323
Number of HSP's that attempted gapping in prelim test: 1072672
Number of HSP's gapped (non-prelim): 37306
length of query: 546
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 398
effective length of database: 8,886,646,355
effective search space: 3536885249290
effective search space used: 3536885249290
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 80 (35.4 bits)