Query 009008
Match_columns 546
No_of_seqs 372 out of 2783
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 16:43:53 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009008.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009008hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fk9_A Protein kinase C, ETA t 99.9 4.4E-23 1.5E-27 190.3 12.4 134 30-188 18-156 (157)
2 2ep6_A MCTP2 protein; beta san 99.9 4.3E-21 1.5E-25 171.6 14.2 126 33-188 5-131 (133)
3 1gmi_A Protein kinase C, epsil 99.8 7.2E-21 2.5E-25 171.0 12.9 128 38-189 3-133 (136)
4 1wfj_A Putative elicitor-respo 99.8 4.8E-21 1.6E-25 171.8 11.3 123 39-192 8-133 (136)
5 3b7y_A E3 ubiquitin-protein li 99.8 2.5E-20 8.5E-25 170.6 14.5 123 40-189 19-153 (153)
6 2dmh_A Myoferlin; beta-sandwic 99.8 3.1E-20 1.1E-24 167.3 14.7 123 40-192 6-136 (140)
7 1v0w_A Phospholipase D; hydrol 99.8 4.6E-22 1.6E-26 216.9 3.0 156 251-463 67-224 (506)
8 3kwu_A MUNC13-1; calcium bindi 99.8 1.1E-19 3.8E-24 165.4 17.9 120 39-188 15-146 (148)
9 1rlw_A Phospholipase A2, CALB 99.8 7.9E-20 2.7E-24 161.5 13.1 121 40-189 2-125 (126)
10 3m7f_B E3 ubiquitin-protein li 99.8 1.7E-19 5.7E-24 169.3 15.6 124 40-190 7-142 (176)
11 2nq3_A Itchy homolog E3 ubiqui 99.8 4.2E-19 1.4E-23 166.5 12.9 129 34-191 29-163 (173)
12 3pyc_A E3 ubiquitin-protein li 99.8 9.1E-19 3.1E-23 156.2 13.9 120 41-187 5-131 (132)
13 2b3r_A Phosphatidylinositol-4- 99.8 2.3E-18 7.9E-23 154.4 13.2 108 35-169 14-130 (134)
14 2r83_A Synaptotagmin-1; C2A-C2 99.8 6.4E-18 2.2E-22 170.1 16.0 128 39-192 17-150 (284)
15 1rsy_A Synaptotagmin I; calciu 99.8 3.3E-18 1.1E-22 156.6 11.8 105 39-169 40-150 (152)
16 3f04_A Synaptotagmin-1; C2A, c 99.7 3.3E-18 1.1E-22 154.6 10.4 104 39-168 32-141 (143)
17 1a25_A CALB, protein kinase C 99.7 6.7E-18 2.3E-22 153.9 12.1 106 38-170 28-140 (149)
18 2q3x_A Regulating synaptic mem 99.7 6.3E-18 2.1E-22 158.0 12.2 108 38-170 27-140 (171)
19 2d8k_A Synaptotagmin VII; exoc 99.7 6.8E-18 2.3E-22 152.3 11.9 106 39-170 24-136 (141)
20 2z0u_A WW domain-containing pr 99.7 1.6E-18 5.6E-23 159.5 7.9 104 39-168 41-154 (155)
21 1rh8_A Piccolo protein; beta-s 99.7 1.4E-18 4.9E-23 156.7 7.4 108 38-171 15-140 (142)
22 3rdl_A Protein kinase C alpha 99.7 8.4E-18 2.9E-22 150.5 12.2 106 38-170 13-125 (137)
23 4ggj_A Mitochondrial cardiolip 99.7 3.5E-18 1.2E-22 163.4 9.7 133 251-464 47-179 (196)
24 2bwq_A Regulating synaptic mem 99.7 8.4E-18 2.9E-22 149.0 11.1 103 39-168 16-129 (129)
25 3fdw_A Synaptotagmin-like prot 99.7 3.8E-18 1.3E-22 155.3 8.4 109 39-172 21-137 (148)
26 2dmg_A KIAA1228 protein; beta- 99.7 1.1E-17 3.8E-22 151.0 10.6 106 40-172 23-138 (142)
27 3fbk_A RGS3, RGP3, regulator o 99.7 2.2E-17 7.4E-22 151.3 12.3 111 34-171 20-139 (153)
28 1v27_A Regulating synaptic mem 99.7 8.7E-18 3E-22 151.1 9.5 105 40-171 20-135 (141)
29 1wfm_A Synaptotagmin XIII; C2 99.7 1.8E-17 6.1E-22 149.3 11.3 103 39-170 24-133 (138)
30 1w15_A Synaptotagmin IV; metal 99.7 1.4E-17 4.7E-22 152.4 9.7 108 39-174 28-143 (153)
31 2chd_A Rabphilin-3A, exophilin 99.7 2E-17 6.9E-22 149.3 10.5 105 39-169 27-140 (142)
32 3n5a_A Synaptotagmin-7; calciu 99.7 8.6E-18 2.9E-22 150.5 7.4 108 39-174 14-129 (138)
33 1tjx_A Similar to synaptotagmi 99.7 6.8E-17 2.3E-21 148.8 12.0 91 39-155 23-121 (159)
34 1ugk_A Synaptotagmin IV, KIAA1 99.7 6.6E-17 2.2E-21 145.2 11.1 106 39-169 20-133 (138)
35 2cm5_A Rabphilin-3A; protein t 99.7 9.1E-17 3.1E-21 149.1 12.3 107 39-173 35-149 (166)
36 3hsi_A Phosphatidylserine synt 99.7 1.2E-17 4E-22 179.3 6.9 163 217-460 24-197 (458)
37 2enp_A B/K protein; C2 type 1, 99.7 3.8E-17 1.3E-21 148.4 8.2 111 39-169 24-141 (147)
38 1dqv_A Synaptotagmin III; beta 99.7 2.7E-16 9.1E-21 159.6 13.9 127 39-192 18-152 (296)
39 3l9b_A Otoferlin; C2-domain, b 99.7 3.1E-16 1.1E-20 140.0 12.4 118 40-191 20-142 (144)
40 2cjt_A UNC-13 homolog A, MUNC1 99.7 5.6E-16 1.9E-20 138.5 12.8 114 41-187 5-130 (131)
41 1byr_A Protein (endonuclease); 99.6 4.7E-16 1.6E-20 142.2 11.3 133 251-463 15-149 (155)
42 4gel_A Mitochondrial cardiolip 99.6 3.5E-16 1.2E-20 151.8 7.3 152 248-464 56-211 (220)
43 1djx_A PLC-D1, phosphoinositid 99.6 4E-15 1.4E-19 165.4 14.0 121 40-188 496-623 (624)
44 3jzy_A Intersectin 2; C2 domai 99.6 3.7E-15 1.3E-19 162.1 13.5 116 39-187 385-506 (510)
45 2cjs_A UNC-13 homolog A, MUNC1 99.6 5.2E-15 1.8E-19 137.8 11.3 84 41-157 14-99 (167)
46 3nsj_A Perforin-1; pore formin 99.6 1.4E-14 4.8E-19 157.9 14.4 107 41-188 394-503 (540)
47 3bxj_A RAS GTPase-activating p 99.6 4.5E-16 1.5E-20 168.5 1.9 124 40-194 10-162 (483)
48 2r83_A Synaptotagmin-1; C2A-C2 99.5 5.4E-14 1.8E-18 141.3 12.7 103 39-169 148-258 (284)
49 1cjy_A CPLA2, protein (cytosol 99.5 2E-14 7E-19 161.3 8.6 104 40-169 17-126 (749)
50 1dqv_A Synaptotagmin III; beta 99.5 2.6E-14 8.9E-19 144.9 5.1 109 40-175 151-267 (296)
51 1xdp_A Polyphosphate kinase; P 99.4 2.6E-13 8.9E-18 151.2 10.9 140 251-464 348-496 (687)
52 3qr0_A Phospholipase C-beta (P 99.3 4.7E-12 1.6E-16 143.5 11.9 113 40-189 649-771 (816)
53 2zkm_X 1-phosphatidylinositol- 99.3 5.7E-12 1.9E-16 143.4 12.5 112 40-188 677-798 (799)
54 3pfq_A PKC-B, PKC-beta, protei 99.3 4.9E-12 1.7E-16 142.4 10.9 106 38-170 169-281 (674)
55 3ohm_B 1-phosphatidylinositol- 99.3 8E-12 2.7E-16 142.5 12.2 111 41-188 725-844 (885)
56 2o8r_A Polyphosphate kinase; s 99.3 4.8E-12 1.6E-16 140.3 7.7 142 251-461 353-500 (705)
57 1yrk_A NPKC-delta, protein kin 99.1 1.9E-09 6.6E-14 93.5 13.5 90 87-188 26-124 (126)
58 2enj_A NPKC-theta, protein kin 99.1 1.6E-09 5.5E-14 95.2 13.0 90 87-188 31-129 (138)
59 3hsi_A Phosphatidylserine synt 98.9 2.1E-09 7.1E-14 115.2 9.7 148 250-464 258-421 (458)
60 1v0w_A Phospholipase D; hydrol 98.7 1.6E-08 5.4E-13 110.0 6.1 160 250-463 314-492 (506)
61 1xdp_A Polyphosphate kinase; P 97.4 0.00042 1.4E-08 77.3 9.6 132 252-465 514-650 (687)
62 2o8r_A Polyphosphate kinase; s 97.3 0.00047 1.6E-08 76.6 8.7 143 240-465 509-656 (705)
63 3qph_A TRMB, A global transcri 95.4 0.015 5.1E-07 59.6 5.8 46 251-307 120-165 (342)
64 2f5t_X Archaeal transcriptiona 94.9 0.033 1.1E-06 53.8 6.0 48 251-309 11-58 (233)
65 2wxf_A Phosphatidylinositol-4, 89.7 1.4 4.8E-05 50.7 11.1 88 38-154 214-323 (940)
66 2yrb_A Protein fantom; beta sa 84.0 3.3 0.00011 37.1 7.9 99 88-188 40-149 (156)
67 3l4c_A Dedicator of cytokinesi 83.6 2.9 0.0001 39.6 7.8 36 103-138 80-118 (220)
68 3hhm_A Phosphatidylinositol-4, 82.1 4.1 0.00014 47.4 9.7 88 39-154 353-454 (1091)
69 1e7u_A Phosphatidylinositol 3- 75.9 9.7 0.00033 43.9 10.3 67 88-154 238-329 (961)
70 2y3a_A Phosphatidylinositol-4, 72.7 2.6 9E-05 49.2 4.6 71 38-137 350-429 (1092)
71 2l82_A Designed protein OR32; 30.3 59 0.002 27.0 4.4 46 287-346 90-135 (162)
72 2bp3_S Platelet glycoprotein I 25.4 29 0.00098 20.6 1.2 12 534-545 9-20 (26)
73 2c1l_A Restriction endonucleas 22.8 2.2E+02 0.0074 27.5 7.4 80 286-398 50-129 (358)
74 2qzq_A Axin interactor, dorsal 21.9 2.4E+02 0.0081 24.8 7.1 72 88-159 32-117 (152)
No 1
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.89 E-value=4.4e-23 Score=190.26 Aligned_cols=134 Identities=20% Similarity=0.291 Sum_probs=106.7
Q ss_pred CCCCceEEeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeC
Q 009008 30 HQGSLKVLLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISN 109 (546)
Q Consensus 30 ~~~~~~~~~~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~rT~vi~~ 109 (546)
++++-++++++|.|+|+|++|++|+.+|..++.+ +|.+ +.|++||||+|.+++++++||+++++
T Consensus 18 ~~~~~~~~~~~g~L~V~VieA~~L~~~D~~~~~~--~f~~--------------~~g~sDPYv~v~l~~~~~~kT~v~~k 81 (157)
T 2fk9_A 18 GSMSSGTMKFNGYLRVRIGEAVGLQPTRWSLRHS--LFKK--------------GHQLLDPYLTVSVDQVRVGQTSTKQK 81 (157)
T ss_dssp ------CCCEEEEEEEEEEEEECCCCCHHHHHTT--TSSS--------------SCCCCCEEEEEEETTEEEEECCCCSS
T ss_pred CCCcchhccCccEEEEEEEEEECCCCcccccccc--cccc--------------CCCCCCeEEEEEECCEeeEEeeecCC
Confidence 3344456678999999999999999888532100 1110 14679999999999998889999999
Q ss_pred CCCCeEeeEEEEeecCCCceEEEEEEecCCcC-CeeeEeEEEeceeccCC----CeeeeccccccCCCCcccCCceEEEE
Q 009008 110 SESPVWMQHFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSG----DKIEGAFPILNSSRKPCKAGAVLSLS 184 (546)
Q Consensus 110 t~nP~WNE~F~~~v~~~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g----~~~~~W~~L~~~~g~~~k~~g~I~l~ 184 (546)
|+||+|||+|.|.+.+ ...|.|+|||+|.++ +++||++.|+|+++..+ ...+.|++|.. .|+|+|.
T Consensus 82 tlnP~WNE~F~f~v~~-~~~L~~~V~D~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~--------~G~i~l~ 152 (157)
T 2fk9_A 82 TNKPTYNEEFCANVTD-GGHLELAVFHETPLGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP--------EGKVFVV 152 (157)
T ss_dssp CSSCEEEEEEEEEEEE-ECEEEEEEEECCSSSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS--------SCEEEEE
T ss_pred CCCCccCcEEEEEcCC-CCEEEEEEEECCCCCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC--------CcEEEEE
Confidence 9999999999999864 568999999999988 88999999999999854 67899999952 3789999
Q ss_pred EEee
Q 009008 185 IQYT 188 (546)
Q Consensus 185 l~f~ 188 (546)
++|.
T Consensus 153 l~~~ 156 (157)
T 2fk9_A 153 ITLT 156 (157)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8873
No 2
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.85 E-value=4.3e-21 Score=171.61 Aligned_cols=126 Identities=21% Similarity=0.316 Sum_probs=108.4
Q ss_pred CceEEeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCC
Q 009008 33 SLKVLLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSES 112 (546)
Q Consensus 33 ~~~~~~~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~rT~vi~~t~n 112 (546)
++......|.|.|+|++|++|+.+|. .|++||||+|.+++++. +|+++++++|
T Consensus 5 s~~~~~~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~-kT~~~~~t~n 57 (133)
T 2ep6_A 5 SSGDVKDVGILQVKVLKAADLLAADF--------------------------SGKSDPFCLLELGNDRL-QTHTVYKNLN 57 (133)
T ss_dssp CCCSCCCSEEEEEEEEEEESCCCSSS--------------------------SSCCCEEEEEEETTEEE-ECCCCSSCSS
T ss_pred cccccCCceEEEEEEEeeECCCCCCC--------------------------CCCcCeEEEEEECCEEE-EeeeecCCCC
Confidence 34444566999999999999998875 46699999999999877 9999999999
Q ss_pred CeEeeEEEEeecCCCceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccCCCCcccCCceEEEEEEee
Q 009008 113 PVWMQHFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (546)
Q Consensus 113 P~WNE~F~~~v~~~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~ 188 (546)
|+|||+|.|.+.+....|.|+|||++.++ +++||++.|+|+++..+. ..|++|....++. +..|+|+|+++|.
T Consensus 58 P~wne~f~f~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~-~~~G~i~l~i~~~ 131 (133)
T 2ep6_A 58 PEWNKVFTFPIKDIHDVLEVTVFDEDGDKPPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQ-AFKGVIYLEMDLI 131 (133)
T ss_dssp CCCCEEEEEEESCTTCEEEEEEEEEETTEEEEECCBCEEEGGGCCSSC--CEECCCBCSCTTS-CCSSEEEEEEEEE
T ss_pred CccccEEEEEecCCCCEEEEEEEECCCCCCCCeeEEEEEEHHHccCCC--ceEEEeecCCCCC-ccceEEEEEEEEE
Confidence 99999999999887789999999999987 889999999999997664 5899998765442 3568999999885
No 3
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.84 E-value=7.2e-21 Score=171.03 Aligned_cols=128 Identities=20% Similarity=0.331 Sum_probs=104.3
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCCCeEee
Q 009008 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQ 117 (546)
Q Consensus 38 ~~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~rT~vi~~t~nP~WNE 117 (546)
+.+|.|+|+|++|++|+++|..++. .+. ...+.+.+||||+|.+++..+++|+++++++||+|||
T Consensus 3 ~~~g~L~v~v~~a~~L~~~d~~~~~---~~g------------~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE 67 (136)
T 1gmi_A 3 VFNGLLKIKICEAVSLKPTAWSLRD---AVG------------PRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHD 67 (136)
T ss_dssp CEEEEEEEEEEEEESCCCCHHHHCC----CC------------SSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEE
T ss_pred ccceEEEEEEEeCcCCCCccccccc---ccc------------cccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCC
Confidence 5689999999999999988853210 000 0001356999999999999888999999999999999
Q ss_pred EEEEeecCCCceEEEEEEecCCcC-CeeeEeEEEeceeccCC--CeeeeccccccCCCCcccCCceEEEEEEeec
Q 009008 118 HFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSG--DKIEGAFPILNSSRKPCKAGAVLSLSIQYTP 189 (546)
Q Consensus 118 ~F~~~v~~~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g--~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~P 189 (546)
+|.|.+... ..|.|+|||+|.++ +++||++.|+|+++..+ ...+.|++|.. .|+|+|.++|.+
T Consensus 68 ~f~f~v~~~-~~L~~~V~d~d~~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~--------~G~i~l~l~~~~ 133 (136)
T 1gmi_A 68 EFVTDVCNG-RKIELAVFHDAPIGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP--------EGKVYVIIDLSG 133 (136)
T ss_dssp EEEEEEEEE-CEEEEEEEECCSSSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS--------SCEEEEEEEEEE
T ss_pred EEEEEecCC-CEEEEEEEeCCCCCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC--------CeEEEEEEEEEe
Confidence 999998755 88999999999887 88999999999999864 34589998842 378999999965
No 4
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.84 E-value=4.8e-21 Score=171.78 Aligned_cols=123 Identities=21% Similarity=0.378 Sum_probs=107.3
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeee-CCCCCeEee
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVIS-NSESPVWMQ 117 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~rT~vi~-~t~nP~WNE 117 (546)
..|.|.|+|++|++|+.+|. .|++||||+|.+++++. +|++++ ++.||+|||
T Consensus 8 ~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~-kT~~~~~~~~nP~Wne 60 (136)
T 1wfj_A 8 PHGTLEVVLVSAKGLEDADF--------------------------LNNMDPYVQLTCRTQDQ-KSNVAEGMGTTPEWNE 60 (136)
T ss_dssp CEEEEEEEEEEEEECSSCCS--------------------------SCSSCCCEEEESSSCEE-ECCCCTTCCSSCEEEE
T ss_pred CcEEEEEEEEeccCCCCccc--------------------------CCCcCceEEEEECCccc-eeEeccCCCCCCccCc
Confidence 45999999999999998875 45699999999998877 999998 899999999
Q ss_pred EEEEeecCCCceEEEEEEecCCcC-CeeeEeEEEeceecc-CCCeeeeccccccCCCCcccCCceEEEEEEeecccc
Q 009008 118 HFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLC-SGDKIEGAFPILNSSRKPCKAGAVLSLSIQYTPVEN 192 (546)
Q Consensus 118 ~F~~~v~~~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~-~g~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~P~~~ 192 (546)
+|.|.+.+....|.|+|||++.++ +++||++.|+|+++. .+...+.|++|. ..++ ..|+|+|+++|.|...
T Consensus 61 ~f~f~v~~~~~~l~~~V~d~~~~~~d~~lG~~~i~l~~l~~~~~~~~~w~~L~-~~~~---~~G~i~l~l~~~p~~~ 133 (136)
T 1wfj_A 61 TFIFTVSEGTTELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVV-KDEE---YKGEIWVALSFKPSGP 133 (136)
T ss_dssp EEEEEEESSCCEEEEEECCSSSCTTTCCSEEEEEESHHHHHHSEEEEEEEEEE-ETTE---EEEEEEEEEEEEECCS
T ss_pred EEEEEECCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCCCcEEEEee-cCCc---cCEEEEEEEEEEeCCC
Confidence 999999877789999999999887 889999999999994 466678999997 3333 4589999999998654
No 5
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.84 E-value=2.5e-20 Score=170.63 Aligned_cols=123 Identities=24% Similarity=0.332 Sum_probs=99.6
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC-----EEEeeeeeeeCCCCCe
Q 009008 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG-----AVIGRTFVISNSESPV 114 (546)
Q Consensus 40 ~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~-----~~~~rT~vi~~t~nP~ 114 (546)
.|.|.|+|++|++|+.+|. .|++||||+|.+.. ....||+++++++||+
T Consensus 19 ~~~L~V~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~ 72 (153)
T 3b7y_A 19 SRIVRVRVIAGIGLAKKDI--------------------------LGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPK 72 (153)
T ss_dssp CEEEEEEEEEEESCC---------------------------------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCC
T ss_pred ccEEEEEEEEeeCCCCCCC--------------------------CCCCCcEEEEEEECCCCccceeeeCccccCCCCCC
Confidence 3889999999999998875 45689999999973 2455999999999999
Q ss_pred EeeEEEEeecCCCceEEEEEEecCCcC-CeeeEeEEEeceeccCCCee------eeccccccCCCCcccCCceEEEEEEe
Q 009008 115 WMQHFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKI------EGAFPILNSSRKPCKAGAVLSLSIQY 187 (546)
Q Consensus 115 WNE~F~~~v~~~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~------~~W~~L~~~~g~~~k~~g~I~l~l~f 187 (546)
|||+|.|.+......|.|+|||++.++ +++||++.|+|+++..+... ..|++|....++. +..|+|+|+++|
T Consensus 73 wne~f~f~v~~~~~~l~~~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~l~l~~ 151 (153)
T 3b7y_A 73 WNEEILFRVHPQQHRLLFEVFDENRLTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKS-RVKGYLRLKMTY 151 (153)
T ss_dssp CCEEEEEEECTTTCEEEEEEEECCSSSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTC-CCCSEEEEEEEE
T ss_pred CCCEEEEEecCCCCEEEEEEEECCCCcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCC-CcceEEEEEEEE
Confidence 999999999877789999999999987 88999999999999865432 5899997654332 356899999999
Q ss_pred ec
Q 009008 188 TP 189 (546)
Q Consensus 188 ~P 189 (546)
.|
T Consensus 152 ~P 153 (153)
T 3b7y_A 152 LP 153 (153)
T ss_dssp CC
T ss_pred eC
Confidence 76
No 6
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=3.1e-20 Score=167.30 Aligned_cols=123 Identities=24% Similarity=0.441 Sum_probs=106.0
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCCCeEeeEE
Q 009008 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQHF 119 (546)
Q Consensus 40 ~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~rT~vi~~t~nP~WNE~F 119 (546)
.|.|.|+|++|++|+.+|. +.+||||+|.+++++. ||++++++.||+|||+|
T Consensus 6 ~g~L~v~v~~a~~L~~~~~---------------------------g~~dpyv~v~~~~~~~-kT~v~~~t~nP~wne~f 57 (140)
T 2dmh_A 6 SGMLRVIVESASNIPKTKF---------------------------GKPDPIVSVIFKDEKK-KTKKVDNELNPVWNEIL 57 (140)
T ss_dssp CCEEEEEEEEEESCCCCSS---------------------------SCCCEEEEEECSSCEE-ECCCCCSCSSCEEEEEE
T ss_pred CcEEEEEEEEeeCCCCCCC---------------------------CCCCeEEEEEECCEeE-EeeeecCCCCCccCcEE
Confidence 4889999999999998764 3489999999998875 99999999999999999
Q ss_pred EEeecC----CCceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccc---cccCCCCcccCCceEEEEEEeeccc
Q 009008 120 NVPVAH----SAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFP---ILNSSRKPCKAGAVLSLSIQYTPVE 191 (546)
Q Consensus 120 ~~~v~~----~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~---L~~~~g~~~k~~g~I~l~l~f~P~~ 191 (546)
.|.+.. ....|.|+|||++.++ +++||++.|+|+++..+...+.|++ |.+..++. ..|+|+++++|.|..
T Consensus 58 ~f~v~~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~--~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 58 EFDLRGIPLDFSSSLGIIVKDFETIGQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQD--TGATIDLVIGYDPPS 135 (140)
T ss_dssp EEECSSCCCCTTCEEEEEEEETTCSSSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCE--EEEEEEEEEEECCCB
T ss_pred EEEecccccCCCCEEEEEEEECCCCCCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCC--CCCEEEEEEEEECCC
Confidence 999864 3588999999999987 7899999999999998888889988 66655542 348999999998854
Q ss_pred c
Q 009008 192 N 192 (546)
Q Consensus 192 ~ 192 (546)
.
T Consensus 136 ~ 136 (140)
T 2dmh_A 136 G 136 (140)
T ss_dssp S
T ss_pred C
Confidence 3
No 7
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=99.83 E-value=4.6e-22 Score=216.92 Aligned_cols=156 Identities=19% Similarity=0.196 Sum_probs=110.5
Q ss_pred hHHHHHHHHHhccceEEEEEEeecceeeEEeCCCCchHHHHHHHhhhcCC--CeEEEEEecCCccccccCCcccCccCCC
Q 009008 251 CWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEG--VRVLILAWDDPTSRSILGYKTDGIMSTN 328 (546)
Q Consensus 251 ~f~~l~~aI~~Ak~~I~I~~w~~~~~~~l~~~~~~~~~l~~~L~~ka~rG--V~VriLvwD~~~s~~~~~~~~~~~~~~~ 328 (546)
+|++++++|++||++|+|++|.+ ++++..+..|.++|++|++|| |+||||+ |..++.... ..
T Consensus 67 ~~~~l~~~I~~Ak~~I~i~~y~~------~~~d~~g~~i~~aL~~aa~rGp~V~Vril~-D~~g~~~~~---------~~ 130 (506)
T 1v0w_A 67 LLAKMTENIGNATRTVDISTLAP------FPNGAFQDAIVAGLKESAAKGNKLKVRILV-GAAPVYHMN---------VI 130 (506)
T ss_dssp HHHHHHHHHHTCSSEEEEEEESS------CCCHHHHHHHHHHHHHHHHTTCCEEEEEEE-ECCC--CCC---------CH
T ss_pred HHHHHHHHHHHhccEEEEEEeec------cCCChHHHHHHHHHHHHHhCCCCcEEEEEE-eCccccccc---------cC
Confidence 79999999999999999999931 356556789999999999999 9999996 775542210 01
Q ss_pred cHHHHHhhcCCCcEEEEccCCCCCCccceeccccccccccccceEEEccCcccccceEEEEEccccccCcccCCCCCCcc
Q 009008 329 DEETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLCKGRYDTPAHPLF 408 (546)
Q Consensus 329 ~~~~~~~l~~~gv~v~~~p~~~~~~~~~~~~~~~~~~~~~HqK~vVID~~~~~~~~~~vAfvGG~nl~~~r~d~~~H~~~ 408 (546)
.....+.|+.+|+++....+.. ...|. .....+.+||+|++|||+ .+||+||+||++++|.+.
T Consensus 131 ~~~~~~~L~~~g~~~~~~~~~~--~~~~~--~~~~~~~r~H~K~~ViD~--------~~a~~Gg~Nl~~d~y~~~----- 193 (506)
T 1v0w_A 131 PSKYRDELTAKLGKAAENITLN--VASMT--TSKTAFSWNHSKILVVDG--------QSALTGGINSWKDDYLDT----- 193 (506)
T ss_dssp HHHHHHHHHHHHGGGGGGEEEE--EEEEC--SBTTTTBCBCCCEEEETT--------TEEEEESCCCCHHHHTSS-----
T ss_pred CHHHHHHHHhcccceeecCccc--ccccc--ccCCccccceeeEEEECC--------cEEEeeccccCccccccC-----
Confidence 1344555665444321000000 00000 000122489999999999 799999999977666431
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCeeeccccccChHHHHHHHHHHHHHhhcc
Q 009008 409 KTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGPAAYDILTNFEERWLKAS 463 (546)
Q Consensus 409 ~~~~~~~~~d~~~~~~~~~~~~~~~~pWhD~~~~i~Gpaa~dl~~~F~~rW~~~~ 463 (546)
..+|||++++|+||+|.++...|.++|+...
T Consensus 194 ------------------------~~~~~D~~v~i~G~~v~~l~~~F~~~W~~~~ 224 (506)
T 1v0w_A 194 ------------------------THPVSDVDLALTGPAAGSAGRYLDTLWTWTC 224 (506)
T ss_dssp ------------------------SSCCBEEEEEEESHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------CCCceEEEEEEECHHHHHHHHHHHHHHhhhc
Confidence 1489999999999999999999999999754
No 8
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.83 E-value=1.1e-19 Score=165.36 Aligned_cols=120 Identities=25% Similarity=0.345 Sum_probs=103.5
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCCCeEeeE
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQH 118 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~rT~vi~~t~nP~WNE~ 118 (546)
..|.|.|+|++|++|+.+|. .|++||||+|.++++.. +|+++++++||+|||+
T Consensus 15 ~~~~L~V~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~-kT~~~~~t~nP~Wne~ 67 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQAKDK--------------------------TGSSDPYVTVQVGKTKK-RTKTIYGNLNPVWEEN 67 (148)
T ss_dssp CCEEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEETTEEE-ECCCCCSCSSCEEEEE
T ss_pred cccEEEEEEEeeeCCCCCCC--------------------------CCCcCeEEEEEECCEEE-ECCccCCCCCCCcccE
Confidence 35999999999999998876 46699999999988777 9999999999999999
Q ss_pred EEEeecCCCceEEEEEEecCCc-----------C-CeeeEeEEEeceeccCCCeeeeccccccCCCCcccCCceEEEEEE
Q 009008 119 FNVPVAHSAAEVHFVVKDNDFV-----------G-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQ 186 (546)
Q Consensus 119 F~~~v~~~~~~l~~~V~D~d~~-----------~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~~~k~~g~I~l~l~ 186 (546)
|.|.+......|.|+|||++.. + +++||++.|+|+++ ....+.|++|....++. ...|.|+|+++
T Consensus 68 f~f~v~~~~~~l~~~v~d~d~~~~~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~-~~~G~i~l~l~ 144 (148)
T 3kwu_A 68 FHFECHNSSDRIKVRVLDEDDDIKSRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKS-AVSGAIRLHIS 144 (148)
T ss_dssp EEEEECSTTCEEEEEEEECCCSHHHHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTC-CCCCEEEEEEE
T ss_pred EEEEecCCCCEEEEEEEECCCCccccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCC-CCceEEEEEEE
Confidence 9999987778999999999985 4 89999999999998 44678999998554332 24589999999
Q ss_pred ee
Q 009008 187 YT 188 (546)
Q Consensus 187 f~ 188 (546)
|.
T Consensus 145 ~e 146 (148)
T 3kwu_A 145 VE 146 (148)
T ss_dssp EE
T ss_pred EE
Confidence 84
No 9
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=7.9e-20 Score=161.51 Aligned_cols=121 Identities=21% Similarity=0.312 Sum_probs=99.7
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeeeCCCCCeEee
Q 009008 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--AVIGRTFVISNSESPVWMQ 117 (546)
Q Consensus 40 ~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~--~~~~rT~vi~~t~nP~WNE 117 (546)
+|.|.|+|++|++|+.++... ..|++||||+|.+++ ....||+++++++||+|||
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d-----------------------~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne 58 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGD-----------------------MLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNE 58 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHH-----------------------HHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEE
T ss_pred CcEEEEEEEeeeCCCCCCccc-----------------------cCCCCCCEEEEEEccCCCceEEccccCCCCCCcccc
Confidence 488999999999999753200 035699999999985 2445999999999999999
Q ss_pred EEEEeec-CCCceEEEEEEecCCcCCeeeEeEEEeceeccCCCeeeeccccccCCCCcccCCceEEEEEEeec
Q 009008 118 HFNVPVA-HSAAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYTP 189 (546)
Q Consensus 118 ~F~~~v~-~~~~~l~~~V~D~d~~~~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~P 189 (546)
+|.|.+. .....|.|+|||++.+++++||++.|+|+++..+...+.|++|.. . +.+.+++.++..|
T Consensus 59 ~f~f~v~~~~~~~l~i~V~d~d~~~~~~iG~~~i~l~~l~~~~~~~~~~~L~~-~-----~~g~i~~~le~~~ 125 (126)
T 1rlw_A 59 TFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQ-V-----TEMVLEMSLEVAS 125 (126)
T ss_dssp EEEEEECTTSCCEEEEEEEECCSSCCEEEEEEEEEGGGSCTTCEEEEEEEETT-T-----EEEEEEEEEECCC
T ss_pred eEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHccCCCcEEEEEEcCC-C-----ceEEEEEEEEeCC
Confidence 9999985 345789999999998889999999999999999999999999964 1 3367777776543
No 10
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.82 E-value=1.7e-19 Score=169.34 Aligned_cols=124 Identities=24% Similarity=0.342 Sum_probs=97.8
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC-----EEEeeeeeeeCCCCCe
Q 009008 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG-----AVIGRTFVISNSESPV 114 (546)
Q Consensus 40 ~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~-----~~~~rT~vi~~t~nP~ 114 (546)
.|.|.|+|++|++|+.+|. .|++||||+|.+.+ ....+|+++++++||+
T Consensus 7 ~g~L~V~v~~a~~L~~~d~--------------------------~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~ 60 (176)
T 3m7f_B 7 TRVVRVKVIAGIGLAKKDI--------------------------LGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPK 60 (176)
T ss_dssp CEEEEEEEEEEESCC---C--------------------------CCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCE
T ss_pred cEEEEEEEEEeeCCCCcCC--------------------------CCCcCcEEEEEEECCCCCcccceeCceECCCCCCc
Confidence 3889999999999998876 45699999999974 1445999999999999
Q ss_pred EeeEEEEeecCCCceEEEEEEecCCcC-CeeeEeEEEeceeccCCCee-e-----eccccccCCCCcccCCceEEEEEEe
Q 009008 115 WMQHFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKI-E-----GAFPILNSSRKPCKAGAVLSLSIQY 187 (546)
Q Consensus 115 WNE~F~~~v~~~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~-~-----~W~~L~~~~g~~~k~~g~I~l~l~f 187 (546)
|||+|.|.+......|.|+|||++.++ +++||++.|+|.++..+... + .||+|....++. +..|.|+|++.|
T Consensus 61 Wne~f~f~v~~~~~~L~~~V~d~d~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~-~~~G~l~l~l~~ 139 (176)
T 3m7f_B 61 WNEEILFRVLPQRHRILFEVFDENRLTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKS-RVKGYLRLKMTY 139 (176)
T ss_dssp EEEEEEEEECTTTCEEEEEEEECC----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTC-CCCSEEEEEEEE
T ss_pred ccceEEEEEcCCCCEEEEEEEECCCCCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCC-ccCEEEEEEEEE
Confidence 999999999877789999999999887 89999999999999865433 2 799997654332 346899999999
Q ss_pred ecc
Q 009008 188 TPV 190 (546)
Q Consensus 188 ~P~ 190 (546)
.|.
T Consensus 140 ~p~ 142 (176)
T 3m7f_B 140 LPK 142 (176)
T ss_dssp CC-
T ss_pred EeC
Confidence 987
No 11
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=4.2e-19 Score=166.46 Aligned_cols=129 Identities=21% Similarity=0.300 Sum_probs=102.5
Q ss_pred ceEEeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCCC
Q 009008 34 LKVLLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESP 113 (546)
Q Consensus 34 ~~~~~~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~rT~vi~~t~nP 113 (546)
.......+.|.|+|++|++|++.+. .+.+||||+|.++++.. ||+++++++||
T Consensus 29 ~~~~~~~~~L~V~V~~A~~L~~~~~--------------------------~~~sDPYv~v~~~~~~~-kT~v~~~tlnP 81 (173)
T 2nq3_A 29 MGSLTMKSQLQITVISAKLKENKKN--------------------------WFGPSPYVEVTVDGQSK-KTEKCNNTNSP 81 (173)
T ss_dssp --CCSCCEEEEEEEEEEEECCCC----------------------------CCCCCEEEEEEETTEEE-ECCCCSSCSSC
T ss_pred ccccCCceEEEEEEEEeECCCCccc--------------------------CCCCCeEEEEEECCEEe-EccccCCCCCC
Confidence 3334567999999999999984432 12389999999998554 99999999999
Q ss_pred eEeeEEEEeecCCCceEEEEEEecCCcC-CeeeEeEEEeceeccCCC-----eeeeccccccCCCCcccCCceEEEEEEe
Q 009008 114 VWMQHFNVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGD-----KIEGAFPILNSSRKPCKAGAVLSLSIQY 187 (546)
Q Consensus 114 ~WNE~F~~~v~~~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~-----~~~~W~~L~~~~g~~~k~~g~I~l~l~f 187 (546)
+|||+|.|.+. ....|.|+|||++.++ +++||++.|+|+++..+. ....|++|....+. .+..|+|.+.+.+
T Consensus 82 ~Wne~f~f~v~-~~~~L~~~V~D~d~~~~dd~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~-~~~~G~L~v~l~~ 159 (173)
T 2nq3_A 82 KWKQPLTVIVT-PVSKLHFRVWSHQTLKSDVLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEP-TETIGDLSICLDG 159 (173)
T ss_dssp EEEEEEEEEEC-TTCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCT-TSEEEEEEEEEES
T ss_pred eECCEEEEEeC-CCCEEEEEEEECCCCCCCceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCC-CcccEEEEEEEee
Confidence 99999999986 4789999999999987 789999999999987431 23679999875332 2345899999999
Q ss_pred eccc
Q 009008 188 TPVE 191 (546)
Q Consensus 188 ~P~~ 191 (546)
.++.
T Consensus 160 l~~~ 163 (173)
T 2nq3_A 160 LQLE 163 (173)
T ss_dssp EECC
T ss_pred eecc
Confidence 8763
No 12
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.79 E-value=9.1e-19 Score=156.24 Aligned_cols=120 Identities=18% Similarity=0.264 Sum_probs=97.2
Q ss_pred eEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC-EEEeeeeeeeCCCCCeEeeEE
Q 009008 41 GNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG-AVIGRTFVISNSESPVWMQHF 119 (546)
Q Consensus 41 g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~-~~~~rT~vi~~t~nP~WNE~F 119 (546)
..|+|+|++|++|+.+|. .|.+||||+|.+++ ....+|+++++++||+|||+|
T Consensus 5 ~~L~V~v~~a~~L~~~d~--------------------------~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f 58 (132)
T 3pyc_A 5 IKIRLTVLCAKNLAKKDF--------------------------FRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHY 58 (132)
T ss_dssp EEEEEEEEEEESCCCCST--------------------------TCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEE
T ss_pred EEEEEEEEEeECCCCCCC--------------------------CCCcCeEEEEEECCCCceEECCccCCCCCCCccCEE
Confidence 579999999999998886 46699999999975 345599999999999999999
Q ss_pred EEeecCCCceEEEEEEecCCcC----CeeeEeEEEeceecc-CCCeeeeccccccCCC-CcccCCceEEEEEEe
Q 009008 120 NVPVAHSAAEVHFVVKDNDFVG----SQIMGAVGIPVEKLC-SGDKIEGAFPILNSSR-KPCKAGAVLSLSIQY 187 (546)
Q Consensus 120 ~~~v~~~~~~l~~~V~D~d~~~----~d~IG~~~i~l~~l~-~g~~~~~W~~L~~~~g-~~~k~~g~I~l~l~f 187 (546)
.|.+... +.|.|+|||++.++ +++||++.|+++++. .+.....|++|....+ .+.+..|+|++++++
T Consensus 59 ~f~v~~~-~~l~~~v~d~d~~~~~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 59 DLYVGKT-DSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp EEEEETT-CCEEEEEEEGGGTTSSTTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred EEEeCCC-CEEEEEEEECCCCCCCCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 9998765 45999999999886 689999999999883 2333457899876532 222456899998875
No 13
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.77 E-value=2.3e-18 Score=154.41 Aligned_cols=108 Identities=15% Similarity=0.256 Sum_probs=91.6
Q ss_pred eEEeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeeeCC
Q 009008 35 KVLLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC----GAVIGRTFVISNS 110 (546)
Q Consensus 35 ~~~~~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~----~~~~~rT~vi~~t 110 (546)
+.-...|.|.|+|++|++|+. +. .|.+||||+|.+. +....||++++++
T Consensus 14 ~~~~~~~~L~V~V~~a~~L~~-~~--------------------------~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t 66 (134)
T 2b3r_A 14 SVSYRNGTLFIMVMHIKDLVT-ED--------------------------GADPNPYVKTYLLPDTHKTSKRKTKISRKT 66 (134)
T ss_dssp EEEEETTEEEEEEEEEECCCC-TT--------------------------SCCCCEEEEEEEESCSSSCCCEECCCCCSC
T ss_pred EEeecCCEEEEEEEEeeCCCC-CC--------------------------CCCCCeEEEEEEEcCCCCCceecCCcCcCC
Confidence 334577899999999999985 43 4679999999992 2334499999999
Q ss_pred CCCeEeeEEEEe-ecC---CCceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeecccccc
Q 009008 111 ESPVWMQHFNVP-VAH---SAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILN 169 (546)
Q Consensus 111 ~nP~WNE~F~~~-v~~---~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~ 169 (546)
+||+|||+|.|. +.. ....|.|+|||++.++ +++||++.|+|+++..+...+.|++|..
T Consensus 67 ~nP~wnE~f~f~~v~~~~l~~~~L~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~ 130 (134)
T 2b3r_A 67 RNPTFNEMLVYSGYSKETLRQRELQLSVLSAESLRENFFLGGITLPLKDFNLSKETVKWYQLTA 130 (134)
T ss_dssp SSCEEEEEEEEESCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGSCTTSCEEEEEECBC
T ss_pred CCCCCccEEEECCcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEhhhccCCCCcceeEECCC
Confidence 999999999999 653 2478999999999987 7899999999999998888899999964
No 14
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=6.4e-18 Score=170.05 Aligned_cols=128 Identities=24% Similarity=0.322 Sum_probs=107.5
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeeeCCCCCeEe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--AVIGRTFVISNSESPVWM 116 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~--~~~~rT~vi~~t~nP~WN 116 (546)
..|.|.|+|++|++|+.+|. .|++||||+|.+.. ....+|+++++++||+||
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~--------------------------~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wn 70 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDM--------------------------GGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFN 70 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSS--------------------------SSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEE
T ss_pred CCCEEEEEEEEeeCCCCCCC--------------------------CCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeC
Confidence 56899999999999998875 46799999999953 234499999999999999
Q ss_pred eEEEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccCCCCcccCCceEEEEEEeecccc
Q 009008 117 QHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYTPVEN 192 (546)
Q Consensus 117 E~F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~P~~~ 192 (546)
|+|.|.+... ...|.|+|||++.++ +++||++.|+|.++..+...+.|++|....+......|.+++.++|.|...
T Consensus 71 e~f~f~v~~~~~~~~~l~~~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p~~~ 150 (284)
T 2r83_A 71 EQFTFKVPYSELAGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVPTAG 150 (284)
T ss_dssp EEEEECCCGGGCTTCEEEEEEEECCSSSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEETTTT
T ss_pred ceEEEEechHHhCcCEEEEEEEECCCCCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecCcCC
Confidence 9999998642 478999999999887 889999999999999888889999998654322234589999999987543
No 15
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.75 E-value=3.3e-18 Score=156.57 Aligned_cols=105 Identities=27% Similarity=0.319 Sum_probs=91.7
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC--CEEEeeeeeeeCCCCCeEe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC--GAVIGRTFVISNSESPVWM 116 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~--~~~~~rT~vi~~t~nP~WN 116 (546)
..+.|.|+|++|++|+.+|. .+.+||||+|.+. +....||++++++.||+||
T Consensus 40 ~~~~L~V~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wn 93 (152)
T 1rsy_A 40 QNNQLLVGIIQAAELPALDM--------------------------GGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFN 93 (152)
T ss_dssp TTTEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEE
T ss_pred CCCEEEEEEEEeECCCCccC--------------------------CCCcCeEEEEEEEcCCCceEeccccCCCCCCcCc
Confidence 56899999999999998875 4669999999993 2334499999999999999
Q ss_pred eEEEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeecccccc
Q 009008 117 QHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILN 169 (546)
Q Consensus 117 E~F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~ 169 (546)
|+|.|.+... ...|.|+|||++.++ +++||++.|+|+++..+...+.|++|..
T Consensus 94 e~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 94 EQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp EEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred ccEEEeecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 9999998642 478999999999987 8899999999999988888899999964
No 16
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.75 E-value=3.3e-18 Score=154.64 Aligned_cols=104 Identities=27% Similarity=0.319 Sum_probs=90.8
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC--CEEEeeeeeeeCCCCCeEe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC--GAVIGRTFVISNSESPVWM 116 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~--~~~~~rT~vi~~t~nP~WN 116 (546)
..+.|.|+|++|++|+.+|. .+.+||||+|.+. +....+|++++++.||+||
T Consensus 32 ~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wn 85 (143)
T 3f04_A 32 QNNQLLVGIIQAAELPALDM--------------------------GGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFN 85 (143)
T ss_dssp TTTEEEEEEEEEECCCCBGG--------------------------GBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEE
T ss_pred CCCEEEEEEEEecCCCCCCC--------------------------CCCcCcEEEEEEECCCCccEECccCcCCCCCcCc
Confidence 56899999999999998775 3568999999992 3344599999999999999
Q ss_pred eEEEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccc
Q 009008 117 QHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPIL 168 (546)
Q Consensus 117 E~F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~ 168 (546)
|+|.|.+... ...|.|+|||++.++ +++||++.|+|+++..+...+.|++|.
T Consensus 86 e~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~ 141 (143)
T 3f04_A 86 EQFTFKVPYSELGGKTLVMAVYDFDRFSKHDIIGEFKVPMNTVDFGHVTEEWRDLQ 141 (143)
T ss_dssp EEEEECCCHHHHTTCEEEEEEEECCSSSCCEEEEEEEEEGGGCCTTSCEEEEEECB
T ss_pred CeEEEeecHhhcCCCEEEEEEEeCCCCCCCceEEEEEEEHHHccCCCCcceEEECc
Confidence 9999997633 378999999999987 899999999999999888899999995
No 17
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=6.7e-18 Score=153.86 Aligned_cols=106 Identities=26% Similarity=0.407 Sum_probs=91.6
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeCCCCC
Q 009008 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISNSESP 113 (546)
Q Consensus 38 ~~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~rT~vi~~t~nP 113 (546)
+..+.|.|+|++|++|+.+|. .+.+||||+|.+.. ....||+++++++||
T Consensus 28 ~~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP 81 (149)
T 1a25_A 28 IDREVLIVVVRDAKNLVPMDP--------------------------NGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNP 81 (149)
T ss_dssp ESSSEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEEESCTTCSSCEECCCCSSCSSC
T ss_pred ecCCEEEEEEEEeeCCCCCCC--------------------------CCCcCeEEEEEEECCCCCcceEecceeCCCCCC
Confidence 457899999999999998875 45699999999963 344599999999999
Q ss_pred eEeeEEEEeecCC--CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccC
Q 009008 114 VWMQHFNVPVAHS--AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNS 170 (546)
Q Consensus 114 ~WNE~F~~~v~~~--~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~ 170 (546)
+|||+|.|.+... ...|.|+|||++.++ +++||++.|+|.++..+ ..+.||+|...
T Consensus 82 ~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~ 140 (149)
T 1a25_A 82 EWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKA-GVDGWFKLLSQ 140 (149)
T ss_dssp EEEEEEEEECCSGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHTTC-CEEEEEECBCH
T ss_pred cCCcEEEEEeccccCCCEEEEEEEECCCCCCCCEEEEEEEEHHHhCcC-ccCCeEEccCC
Confidence 9999999998753 368999999999987 88999999999999876 47899999753
No 18
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.74 E-value=6.3e-18 Score=157.99 Aligned_cols=108 Identities=21% Similarity=0.267 Sum_probs=93.7
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC--E--EEeeeeeeeCCCCC
Q 009008 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--A--VIGRTFVISNSESP 113 (546)
Q Consensus 38 ~~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~--~--~~~rT~vi~~t~nP 113 (546)
+..|.|.|+|++|++|+.+|.. .|.+||||+|.+.. . ...||+++++++||
T Consensus 27 y~~~~L~V~v~~a~~L~~~d~~-------------------------~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP 81 (171)
T 2q3x_A 27 DKKGQLEVEVIRARSLTQKPGS-------------------------KSTPAPYVKVYLLENGACIAKKKTRIARKTLDP 81 (171)
T ss_dssp EETTEEEEEEEEEESCCCCC----------------------------CCCEEEEEEEEEETTEEEEEEECCCCCSCSSC
T ss_pred ECCCEEEEEEEEeeCCCCCCcC-------------------------CCCCCceEEEEEECCCccccceeCccCCCCCCC
Confidence 4689999999999999988741 35699999999953 2 35599999999999
Q ss_pred eEeeEEEEeecCCCceEEEEEE-ecCCcC-CeeeEeEEEeceeccCCCeeeeccccccC
Q 009008 114 VWMQHFNVPVAHSAAEVHFVVK-DNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNS 170 (546)
Q Consensus 114 ~WNE~F~~~v~~~~~~l~~~V~-D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~ 170 (546)
+|||+|.|.+......|.|+|| |++.++ +++||++.|+|+++..+...+.|++|...
T Consensus 82 ~wne~f~f~v~~~~~~L~~~V~~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 140 (171)
T 2q3x_A 82 LYQQSLVFDESPQGKVLQVIVWGDYGRMDHKCFMGVAQILLEELDLSSMVIGWYKLFPP 140 (171)
T ss_dssp EEEEEEECSSCCTTEEEEEEEEEECSTTCSSEEEEEEEECGGGSCTTSCEEEEEECBCG
T ss_pred CCCcEEEEEecCCCCEEEEEEEEcCCCCCCCCEEEEEEEEHHHcccCCCcceeEECCCc
Confidence 9999999999777789999999 999987 78999999999999888888999999754
No 19
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=6.8e-18 Score=152.27 Aligned_cols=106 Identities=23% Similarity=0.226 Sum_probs=91.6
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC--CEEEeeeeeeeCCCCCeEe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC--GAVIGRTFVISNSESPVWM 116 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~--~~~~~rT~vi~~t~nP~WN 116 (546)
..+.|.|+|++|++|+.+|. .|++||||+|.+. +....||++++++.||+||
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wn 77 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDF--------------------------SGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWN 77 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSS--------------------------SSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCC
T ss_pred CCCEEEEEEEEeECCCCCCC--------------------------CCCCCcEEEEEEECCCCccEeCceEcCCCCCccc
Confidence 56899999999999998875 4669999999994 3334599999999999999
Q ss_pred eEEEEeecC----CCceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccC
Q 009008 117 QHFNVPVAH----SAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNS 170 (546)
Q Consensus 117 E~F~~~v~~----~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~ 170 (546)
|+|.|.+.. ....|.|+|||++.++ +++||++.|+|+++..+...+.|++|...
T Consensus 78 e~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~ 136 (141)
T 2d8k_A 78 ETFLFEGFPYEKVVQRILYLQVLDYDRFSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPS 136 (141)
T ss_dssp EEEEECSCCHHHHTTSEEEEEEEECCSSSSCEEEEEEEEETTTSCTTSCEEEEECCEEC
T ss_pred cEEEECccCHHHcccCEEEEEEEECCCCCCCcEEEEEEEEhhhhcCCCCccEEEECcCC
Confidence 999998532 2478999999999987 88999999999999988888999999754
No 20
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.74 E-value=1.6e-18 Score=159.54 Aligned_cols=104 Identities=17% Similarity=0.272 Sum_probs=90.0
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC---E--EEeeeeeeeCCCCC
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG---A--VIGRTFVISNSESP 113 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~---~--~~~rT~vi~~t~nP 113 (546)
..+.|.|+|++|++|+.+|. .|++||||+|.+.. . ...||+++++|+||
T Consensus 41 ~~~~L~V~Vi~a~~L~~~d~--------------------------~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP 94 (155)
T 2z0u_A 41 KNKQFAILIIQLSNLSALLQ--------------------------QQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTL 94 (155)
T ss_dssp TTTEEEEEEEEEECGGGTCC--------------------------SCCSEEEEEEEEESCSCHHHHEEECCCEECCSSE
T ss_pred CCCEEEEEEEEccCcCCccc--------------------------CCCCCEEEEEEEecCCCCCccceeCCcCCCCCCC
Confidence 56899999999999998885 56799999999954 2 24599999999999
Q ss_pred eEeeEEEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEeceecc-CCCeeeeccccc
Q 009008 114 VWMQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLC-SGDKIEGAFPIL 168 (546)
Q Consensus 114 ~WNE~F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~-~g~~~~~W~~L~ 168 (546)
+|||+|.|.+... ...|.|+|||+|.++ +++||++.|+|+++. .+....+|++|.
T Consensus 95 ~wnE~F~f~v~~~~l~~~~L~~~V~d~d~~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 95 VFNEVFWVSMSYPALHQKTLRVDVCTTDRSHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEEEEEEEECCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred ccccEEEEEcCHHHhCcCEEEEEEEECCCCCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 9999999998643 368999999999987 789999999999996 367788999985
No 21
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=1.4e-18 Score=156.75 Aligned_cols=108 Identities=25% Similarity=0.292 Sum_probs=92.4
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCE-------------EEeee
Q 009008 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGA-------------VIGRT 104 (546)
Q Consensus 38 ~~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~-------------~~~rT 104 (546)
+..|.|.|+|++|++|+.+|. .|.+||||+|.+.+. ...||
T Consensus 15 y~~~~L~V~v~~a~~L~~~d~--------------------------~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT 68 (142)
T 1rh8_A 15 YDLGNLIIHILQARNLVPRDN--------------------------NGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRT 68 (142)
T ss_dssp EETTEEEEEEEEEESCCCCSS--------------------------SSCSCCEEEEEETTSSCCCEECCCCCHHHHTTT
T ss_pred EcCCEEEEEEEEecCCCCCCC--------------------------CCCCCceEEEEEecCCCcccccccccccceeec
Confidence 457899999999999998875 467999999999763 24599
Q ss_pred eeeeCCCCCeEeeEEEEe-ecC---CCceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccCC
Q 009008 105 FVISNSESPVWMQHFNVP-VAH---SAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSS 171 (546)
Q Consensus 105 ~vi~~t~nP~WNE~F~~~-v~~---~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~ 171 (546)
+++++++||+|||+|.|. +.. ....|.|+|||++.++ +++||++.|+|+++..+...+.|++|....
T Consensus 69 ~v~~~t~nP~wne~f~f~~v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~~ 140 (142)
T 1rh8_A 69 KYVQKSLNPEWNQTVIYKSISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQT 140 (142)
T ss_dssp TTTHHHHSCEEEEEEEECSCCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETTSCGGGTTCCEEEECBCCC
T ss_pred cccCCCCCCCCCCEEEECCcCHHHccCCEEEEEEEECCCCCCCceEEEEEEeccccccCCCCCeEEECCccC
Confidence 999999999999999997 542 3468999999999987 789999999999998777788999997543
No 22
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.74 E-value=8.4e-18 Score=150.51 Aligned_cols=106 Identities=26% Similarity=0.393 Sum_probs=91.0
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeeeCCCCC
Q 009008 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC----GAVIGRTFVISNSESP 113 (546)
Q Consensus 38 ~~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~----~~~~~rT~vi~~t~nP 113 (546)
+..|.|.|+|++|++|+.+|. .|.+||||+|.+. +....+|++++++.||
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~--------------------------~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP 66 (137)
T 3rdl_A 13 VTDEKLHVTVRDAKNLIPMDP--------------------------NGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNP 66 (137)
T ss_dssp EETTEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEEECCTTCCCCEECCCCCSCSSC
T ss_pred EcCCEEEEEEEEeeCCCCCCC--------------------------CCCCCeeEEEEEEcCCCCCeeecCceEcCCCCC
Confidence 367999999999999998876 4669999999993 2344499999999999
Q ss_pred eEeeEEEEeecCC--CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccC
Q 009008 114 VWMQHFNVPVAHS--AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNS 170 (546)
Q Consensus 114 ~WNE~F~~~v~~~--~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~ 170 (546)
+|||+|.|.+... ...|.|+|||++.++ +++||++.|+|+++..+. .++|++|.+.
T Consensus 67 ~wne~f~f~~~~~~~~~~l~i~v~d~d~~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 67 QWNESFTFKLKPSDKDRRLSVEIWDWDRTTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp EEEEEEEEECCGGGGGCEEEEEEEECCSSSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred CcccEEEEEcCchhcCCEEEEEEEECCCCCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 9999999998643 358999999999887 889999999999998665 7899999764
No 23
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=99.74 E-value=3.5e-18 Score=163.37 Aligned_cols=133 Identities=18% Similarity=0.215 Sum_probs=100.5
Q ss_pred hHHHHHHHHHhccceEEEEEEeecceeeEEeCCCCchHHHHHHHhhhcCCCeEEEEEecCCccccccCCcccCccCCCcH
Q 009008 251 CWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMSTNDE 330 (546)
Q Consensus 251 ~f~~l~~aI~~Ak~~I~I~~w~~~~~~~l~~~~~~~~~l~~~L~~ka~rGV~VriLvwD~~~s~~~~~~~~~~~~~~~~~ 330 (546)
.|++|+++|++|+++|+|+.|. +.+ ..|.++|++|++|||+||||+ |...... ..
T Consensus 47 ~~~~ll~~I~~A~~sI~i~~y~-------~~~----~~i~~aL~~aa~rGV~Vrii~-D~~~~~~-------------~~ 101 (196)
T 4ggj_A 47 SLSRLLRALLAARSSLELCLFA-------FSS----PQLGRAVQLLHQRGVRVRVIT-DCDYMAL-------------NG 101 (196)
T ss_dssp HHHHHHHHHHTCSSEEEEEESC-------BCC----HHHHHHHHHHHHTTCEEEEEE-SSCCC----------------C
T ss_pred HHHHHHHHHHHhheEEEEEEEE-------eCC----HHHHHHHHHHHHcCCcEEEEE-ecccccc-------------cH
Confidence 7999999999999999999994 434 689999999999999999996 8632211 11
Q ss_pred HHHHhhcCCCcEEEEccCCCCCCccceeccccccccccccceEEEccCcccccceEEEEEccccccCcccCCCCCCcccc
Q 009008 331 ETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLCKGRYDTPAHPLFKT 410 (546)
Q Consensus 331 ~~~~~l~~~gv~v~~~p~~~~~~~~~~~~~~~~~~~~~HqK~vVID~~~~~~~~~~vAfvGG~nl~~~r~d~~~H~~~~~ 410 (546)
.....|..+||++...... ...|+|++|||+ .++|+||+|++...+..
T Consensus 102 ~~~~~l~~~gi~v~~~~~~----------------~~~H~K~~viD~--------~~~~~GS~N~t~~~~~~-------- 149 (196)
T 4ggj_A 102 SQIGLLRKAGIQVRHDQDL----------------GYMHHKFAIVDK--------KVLITGSLNWTTQAIQN-------- 149 (196)
T ss_dssp CHHHHHHHTTCEEEECCSS----------------SCCCCEEEEETT--------TEEEEESCCBCHHHHHH--------
T ss_pred HHHHHHHhcCCCccccccc----------------ccccCcEEEEcc--------eEEEecCccCChhhhcc--------
Confidence 2355688899998764321 247999999999 69999999998754321
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCeeeccccccChHHHHHHHHHHHHHhhccC
Q 009008 411 LETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGPAAYDILTNFEERWLKASK 464 (546)
Q Consensus 411 ~~~~~~~d~~~~~~~~~~~~~~~~pWhD~~~~i~Gpaa~dl~~~F~~rW~~~~~ 464 (546)
.|.++.+.-.+++|..+.+.|++.|+....
T Consensus 150 ------------------------n~E~~~~i~~~~~~~~~~~~F~~~W~~~~p 179 (196)
T 4ggj_A 150 ------------------------NRENVLIMEDTEYVRLFLEEFERIWEEFDP 179 (196)
T ss_dssp ------------------------CCEEEEEECCHHHHHHHHHHHHHHHHHTCC
T ss_pred ------------------------cceeEEEEECHHHHHHHHHHHHHHHHhCCC
Confidence 223333334456799999999999997544
No 24
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.74 E-value=8.4e-18 Score=149.04 Aligned_cols=103 Identities=21% Similarity=0.286 Sum_probs=83.7
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeeeCCCCCe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC----GAVIGRTFVISNSESPV 114 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~----~~~~~rT~vi~~t~nP~ 114 (546)
..|.|.|+|++|++|+.+|. .|++||||+|.+. +....+|++++++.||+
T Consensus 16 ~~~~L~v~v~~a~~L~~~d~--------------------------~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~ 69 (129)
T 2bwq_A 16 VGHQLIVTILGAKDLPSRED--------------------------GRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPK 69 (129)
T ss_dssp TTTEEEEEEEEEESCCCCTT--------------------------SCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCE
T ss_pred CCCEEEEEEEEeeCCCCCCC--------------------------CCCCCCEEEEEEecCCCCCcceecccccCCCCCc
Confidence 45889999999999998875 4668999999992 23455999999999999
Q ss_pred EeeEEEEeecC----CCceEEEEEEecCCcC---CeeeEeEEEeceeccCCCeeeeccccc
Q 009008 115 WMQHFNVPVAH----SAAEVHFVVKDNDFVG---SQIMGAVGIPVEKLCSGDKIEGAFPIL 168 (546)
Q Consensus 115 WNE~F~~~v~~----~~~~l~~~V~D~d~~~---~d~IG~~~i~l~~l~~g~~~~~W~~L~ 168 (546)
|||+|.|.+.. ....|.|+|||++.++ +++||++.|+|+++.... .++||+|.
T Consensus 70 wne~f~f~~~~~~~~~~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 70 WNQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EEEEEEECSCCGGGGGGCEEEEEEEEC-------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred cccEEEEccCCHHHhcCCeEEEEEEECCcCcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 99999999532 2478999999999887 789999999999987644 78999983
No 25
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.73 E-value=3.8e-18 Score=155.33 Aligned_cols=109 Identities=19% Similarity=0.306 Sum_probs=91.3
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeCCCCCe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISNSESPV 114 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~rT~vi~~t~nP~ 114 (546)
..|.|.|+|++|++|+.+|.. .+.+||||+|.+.. ....+|+++++++||+
T Consensus 21 ~~~~L~V~v~~a~~L~~~d~~-------------------------~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~ 75 (148)
T 3fdw_A 21 QTQSLVVHVKECHQLAYADEA-------------------------KKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPL 75 (148)
T ss_dssp TTTEEEEEEEEEESCCCSBTT-------------------------TTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCE
T ss_pred CCCEEEEEEEEecCCCCcccC-------------------------CCCCCeEEEEEEEcCCcccCccccccCCCCCCCc
Confidence 368999999999999987731 45699999999962 2245999999999999
Q ss_pred EeeEEEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccCCC
Q 009008 115 WMQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSR 172 (546)
Q Consensus 115 WNE~F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g 172 (546)
|||+|.|.+... ...|.|+|||++.++ +++||++.|+|+++..+...+.|++|..+.+
T Consensus 76 wne~f~f~v~~~~~~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~ 137 (148)
T 3fdw_A 76 YDETLRYEIPESLLAQRTLQFSVWHHGRFGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKIS 137 (148)
T ss_dssp EEEEEEEECCSTTGGGCEEEEEEEEECGGGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC--
T ss_pred EeeEEEEEeChhHhCceEEEEEEEECCCCcCCcEEEEEEEEcccccccCCccceEECcCccc
Confidence 999999998654 357999999999987 7899999999999987777889999986543
No 26
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.73 E-value=1.1e-17 Score=150.98 Aligned_cols=106 Identities=20% Similarity=0.231 Sum_probs=89.9
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC--E--EEeeeeeeeCCCCCeE
Q 009008 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--A--VIGRTFVISNSESPVW 115 (546)
Q Consensus 40 ~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~--~--~~~rT~vi~~t~nP~W 115 (546)
.+.|.|+|++|++|+.+|. .| +||||+|.+.. . ...+|+++++++||+|
T Consensus 23 ~~~L~v~v~~a~~L~~~d~--------------------------~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~w 75 (142)
T 2dmg_A 23 RNKLIVVVHACRNLIAFSE--------------------------DG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVF 75 (142)
T ss_dssp TTEEEEEEEEEECCCCSST--------------------------TC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEE
T ss_pred CCEEEEEEEEeECCCCCCC--------------------------CC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCc
Confidence 6889999999999998875 45 99999999932 2 3449999999999999
Q ss_pred eeEEEEeecCC---CceEEEEEEecCCcC---CeeeEeEEEeceeccCCCeeeeccccccCCC
Q 009008 116 MQHFNVPVAHS---AAEVHFVVKDNDFVG---SQIMGAVGIPVEKLCSGDKIEGAFPILNSSR 172 (546)
Q Consensus 116 NE~F~~~v~~~---~~~l~~~V~D~d~~~---~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g 172 (546)
||+|.|.+... ...|.|+|||++.++ +++||++.|+|+++..+...+.|++|....+
T Consensus 76 ne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~~ 138 (142)
T 2dmg_A 76 DQSFDFSVSLPEVQRRTLDVAVKNSGGFLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDSG 138 (142)
T ss_dssp EEEEEECCCHHHHHHCEEEEEEEECCCSSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSCS
T ss_pred CceEEEEecHHHhCcCEEEEEEEECCCccccCCcEEEEEEEecccccccccccceeeccCCCC
Confidence 99999998642 258999999999875 3699999999999987778899999986543
No 27
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.72 E-value=2.2e-17 Score=151.32 Aligned_cols=111 Identities=23% Similarity=0.335 Sum_probs=92.1
Q ss_pred ceEEeeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeC
Q 009008 34 LKVLLLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISN 109 (546)
Q Consensus 34 ~~~~~~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~rT~vi~~ 109 (546)
+......|.|.|+|++|++|+.+|. |.+||||+|.+.. ....+|+++++
T Consensus 20 L~y~~~~~~L~V~v~~a~~L~~~d~---------------------------g~~Dpyv~v~l~~~~~~~~~~kT~v~~~ 72 (153)
T 3fbk_A 20 LSIDAQDRVLLLHIIEGKGLISKQP---------------------------GTCDPYVKISLIPEDSRLRHQKTQTVPD 72 (153)
T ss_dssp EEEEESSSEEEEEEEEEESCCCCSS---------------------------SCCCEEEEEEEESCSCCTTCEECCCCTT
T ss_pred EEEECCCCEEEEEEEEeeCCCCCCC---------------------------CCCCEEEEEEEEcCCCCccEEeccccCC
Confidence 4445678999999999999998762 4589999999932 23449999999
Q ss_pred CCCCeEeeEEEEee--cCCCceEEEEEEecCCcC--CeeeEeEEEeceeccC-CCeeeeccccccCC
Q 009008 110 SESPVWMQHFNVPV--AHSAAEVHFVVKDNDFVG--SQIMGAVGIPVEKLCS-GDKIEGAFPILNSS 171 (546)
Q Consensus 110 t~nP~WNE~F~~~v--~~~~~~l~~~V~D~d~~~--~d~IG~~~i~l~~l~~-g~~~~~W~~L~~~~ 171 (546)
++||+|||+|.|.+ .+....|.|+|||++.++ +++||++.|+|+++.. +...+.|++|....
T Consensus 73 t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 73 CRDPAFHEHFFFPVQEEDDQKRLLVTVWNRASQSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp CSSCEEEEEEEEECCGGGTTSEEEEEEEECCSSGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred CCCCccccEEEEecccHHhCCEEEEEEEeCCCCCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 99999999999998 444467999999999875 7899999999999985 77889999998653
No 28
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=8.7e-18 Score=151.14 Aligned_cols=105 Identities=20% Similarity=0.258 Sum_probs=88.9
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeeeCCCCCeE
Q 009008 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC----GAVIGRTFVISNSESPVW 115 (546)
Q Consensus 40 ~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~----~~~~~rT~vi~~t~nP~W 115 (546)
.+.|.|+|++|++|+.+|. .+.+||||+|.+. +....||+++++++||+|
T Consensus 20 ~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~w 73 (141)
T 1v27_A 20 GHQLIVTILGAKDLPSRED--------------------------GRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKW 73 (141)
T ss_dssp TTEEEEEEEEEESCCCCSS--------------------------SCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCC
T ss_pred CCEEEEEEEEccCCCCcCC--------------------------CCCCCCEEEEEEecCCCCCcceeCccccCCCCCcc
Confidence 5889999999999998876 4669999999993 234459999999999999
Q ss_pred eeEEEEee-cCC---CceEEEEEEecCCcC---CeeeEeEEEeceeccCCCeeeeccccccCC
Q 009008 116 MQHFNVPV-AHS---AAEVHFVVKDNDFVG---SQIMGAVGIPVEKLCSGDKIEGAFPILNSS 171 (546)
Q Consensus 116 NE~F~~~v-~~~---~~~l~~~V~D~d~~~---~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~ 171 (546)
||+|.|.+ ... ...|.|+|||++.++ +++||++.|+|.++.... .+.||+|...+
T Consensus 74 ne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~ 135 (141)
T 1v27_A 74 NQTFIYSPVHRREFRERMLEITLWDQARVREEESEFLGEILIELETALLDD-EPHWYKLQTHD 135 (141)
T ss_dssp CCCCEECSCCTTGGGTCEEEEEEEEBCSSSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCS
T ss_pred ccEEEEccCCHHHhcCCEEEEEEEECCCCcCCCCceEEEEEEEccccCCCC-CCceEECcccc
Confidence 99999995 322 378999999999887 789999999999987554 78999998654
No 29
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.72 E-value=1.8e-17 Score=149.30 Aligned_cols=103 Identities=17% Similarity=0.172 Sum_probs=87.8
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEE---CCEEEeeeeeeeCCCCCeE
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSI---CGAVIGRTFVISNSESPVW 115 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l---~~~~~~rT~vi~~t~nP~W 115 (546)
..+.|.|+|++|+ ++|. .|++||||+|.+ ++....+|+++++++||+|
T Consensus 24 ~~~~L~V~v~~a~---~~d~--------------------------~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~w 74 (138)
T 1wfm_A 24 QKAELFVTRLEAV---TSNH--------------------------DGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTW 74 (138)
T ss_dssp TTTEEEEEEEEEE---CCCC--------------------------SSCCCEEEEEEEEETTEEEEEECCCCCCCSSEEC
T ss_pred CCCEEEEEEEEEE---cCCC--------------------------CCCcceEEEEEEEcCCCcccEecccCcCCCCCcC
Confidence 4689999999999 3454 567999999999 3444569999999999999
Q ss_pred eeEEEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccC
Q 009008 116 MQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNS 170 (546)
Q Consensus 116 NE~F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~ 170 (546)
||+|.|.+... ...|.|+|||+|.++ +++||++.|+|.++..+...+.|++|...
T Consensus 75 nE~f~f~v~~~~l~~~~L~~~V~d~d~~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 75 EEGLVLPLAEEELPTATLTLTLRTCDRFSRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp SSCEEEECCTTSSTTCEEEEEEEECCSSCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred CceEEEEecHHHcCCCEEEEEEEECCCCCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 99999998643 368999999999987 88999999999999877778899999754
No 30
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.71 E-value=1.4e-17 Score=152.37 Aligned_cols=108 Identities=22% Similarity=0.309 Sum_probs=87.3
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEE--CCEE--EeeeeeeeCCCCCe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSI--CGAV--IGRTFVISNSESPV 114 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l--~~~~--~~rT~vi~~t~nP~ 114 (546)
..+.|.|+|++|++|+.+|. .|++||||+|.+ ++.. ..||+++++++||+
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~ 81 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDV--------------------------SGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAV 81 (153)
T ss_dssp TTTEEEEEEEEEESCC--------------------------------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEE
T ss_pred CCCEEEEEEEEeECCCCcCC--------------------------CCCCCeEEEEEEEeCCeEeceEecCcccCCCCCe
Confidence 56899999999999998875 456899999999 4443 44999999999999
Q ss_pred EeeEEEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccCCCCc
Q 009008 115 WMQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKP 174 (546)
Q Consensus 115 WNE~F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~~ 174 (546)
|||+|.|.+... ...|.|+|||++.++ +++||++.|++++ .+...+.|++|....+++
T Consensus 82 wne~f~f~v~~~~l~~~~l~v~V~d~d~~~~~~~lG~~~i~l~~--~~~~~~~W~~l~~~p~~~ 143 (153)
T 1w15_A 82 FNELFVFDIPCESLEEISVEFLVLDSERGSRNEVIGRLVLGATA--EGSGGGHWKEICDFPRRQ 143 (153)
T ss_dssp EEEEEEEECCSSSSTTEEEEEEEEECCTTSCCEEEEEEEESTTC--CSHHHHHHHHHHHSTTCC
T ss_pred ecceEEEECCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCC--CchHHHHHHHHHhCCCCe
Confidence 999999998754 268999999999887 8899999999987 455678899998765553
No 31
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.71 E-value=2e-17 Score=149.27 Aligned_cols=105 Identities=23% Similarity=0.343 Sum_probs=90.3
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeCCCCCe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISNSESPV 114 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~rT~vi~~t~nP~ 114 (546)
..+.|.|+|++|++|+.+|. .|.+||||+|.+.+ ....||++++++.||+
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~ 80 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDS--------------------------NGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPV 80 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCT--------------------------TSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCE
T ss_pred CCCEEEEEEEEecCCCCCCC--------------------------CCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCc
Confidence 56899999999999998875 46799999999964 2445999999999999
Q ss_pred EeeEEEEe-ecCC---CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeecccccc
Q 009008 115 WMQHFNVP-VAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILN 169 (546)
Q Consensus 115 WNE~F~~~-v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~ 169 (546)
|||+|.|. +... ...|.|+|||++.++ +++||++.|+|+++..+.....|++|..
T Consensus 81 wne~f~f~~~~~~~~~~~~l~i~V~d~d~~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 81 WNETLQYHGITEEDMQRKTLRISVCDEDKFGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp EEEEEEEESCCHHHHHHCEEEEEEEEECTTSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred CcCEEEEcccCHHHccCCEEEEEEEECCCCCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 99999998 5432 268999999999987 7899999999999998888888888853
No 32
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.71 E-value=8.6e-18 Score=150.50 Aligned_cols=108 Identities=19% Similarity=0.314 Sum_probs=90.9
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeCCCCCe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISNSESPV 114 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~rT~vi~~t~nP~ 114 (546)
..|.|.|+|++|++|+.+|. .|.+||||+|.+.+ ....+|++++++.||+
T Consensus 14 ~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~ 67 (138)
T 3n5a_A 14 SANSIIVNIIKARNLKAMDI--------------------------GGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPI 67 (138)
T ss_dssp TTTEEEEEEEEEESCCCCBT--------------------------TTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCE
T ss_pred CCCeEEEEEEEeeCCCCcCC--------------------------CCCcCeEEEEEEEeCCCccceEeCccccCCCCCc
Confidence 45889999999999998875 45699999999963 2455999999999999
Q ss_pred EeeEEEEeecCCC---ceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccCCCCc
Q 009008 115 WMQHFNVPVAHSA---AEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKP 174 (546)
Q Consensus 115 WNE~F~~~v~~~~---~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~~ 174 (546)
|||+|.|.+.... ..|.|+|+|++.++ +++||++.|+++++ +...++|++|....+++
T Consensus 68 wne~f~f~v~~~~l~~~~l~~~V~d~~~~~~~~~lG~~~i~l~~~--~~~~~~W~~l~~~~~~~ 129 (138)
T 3n5a_A 68 FNESFAFDIPTEKLRETTIIITVMDKDKLSRNDVIGKIYLSWKSG--PGEVKHWKDMIARPRQP 129 (138)
T ss_dssp EEEEEEEECCGGGGGGEEEEEEEEECCSSSCCEEEEEEEESSSSC--HHHHHHHHHHHHSTTCC
T ss_pred CcceEEEECChhhcCceEEEEEEEECCCCCCCcEEEEEEEccccC--ChHHHHHHHHHhCCCCe
Confidence 9999999986543 68999999999987 88999999999874 34567899998776654
No 33
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.70 E-value=6.8e-17 Score=148.79 Aligned_cols=91 Identities=29% Similarity=0.406 Sum_probs=78.7
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeCCCCCe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISNSESPV 114 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~rT~vi~~t~nP~ 114 (546)
..|.|.|+|++|++|+.+|. .|.+||||+|.+.. ....+|+++++++||+
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~--------------------------~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~ 76 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDV--------------------------GGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPY 76 (159)
T ss_dssp TTTEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCE
T ss_pred CCCEEEEEEEEeeCCCCccC--------------------------CCCCCeEEEEEEEeCCceeceeeCceecCCCCCc
Confidence 57899999999999998875 46699999999952 2455999999999999
Q ss_pred EeeEEEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEeceec
Q 009008 115 WMQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKL 155 (546)
Q Consensus 115 WNE~F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l 155 (546)
|||+|.|.+... ...|.|+|||++.++ +++||++.|++..+
T Consensus 77 wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~ 121 (159)
T 1tjx_A 77 YNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNST 121 (159)
T ss_dssp EEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCC
T ss_pred ccceEEEEcCHHHhCCcEEEEEEEECCCCCCCceEEEEEECCCCC
Confidence 999999998643 357999999999987 88999999999864
No 34
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.69 E-value=6.6e-17 Score=145.24 Aligned_cols=106 Identities=25% Similarity=0.385 Sum_probs=87.7
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC--CEEEeeeeeeeCCCCCeEe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC--GAVIGRTFVISNSESPVWM 116 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~--~~~~~rT~vi~~t~nP~WN 116 (546)
..+.|.|+|++|++|+.+|.. ++.+||||+|.+. +....||+++++++||+||
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~-------------------------~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wn 74 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQ-------------------------SMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFD 74 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTT-------------------------TTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCC-------------------------CCCCCCEEEEEEecCCCceEecCcCcCCCCCcEe
Confidence 568899999999999988752 2569999999995 2345599999999999999
Q ss_pred eEEEEe-ecCC---CceEEEEEEecCCcC-CeeeEeEEEeceeccCCC-eeeecccccc
Q 009008 117 QHFNVP-VAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGD-KIEGAFPILN 169 (546)
Q Consensus 117 E~F~~~-v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~-~~~~W~~L~~ 169 (546)
|+|.|. +... ...|.|+|||++.++ +++||++.|+|+++..+. ....|++|..
T Consensus 75 e~f~f~~v~~~~~~~~~l~i~V~d~d~~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~ 133 (138)
T 1ugk_A 75 ETFTFYGIPYTQIQELALHFTILSFDRFSRDDIIGEVLIPLSGIELSEGKMLMNREIIS 133 (138)
T ss_dssp EEEEEECCCSTTGGGCEEEEEEEEECSSCCCCCCEEEEEECTTCCCTTCCEEEEEECBS
T ss_pred eEEEEcCcCHHHhccCEEEEEEEECCCCCCCcEEEEEEEehhHccCCCCcchhhhhhhc
Confidence 999995 5532 368999999999987 789999999999998654 3456788864
No 35
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.69 E-value=9.1e-17 Score=149.08 Aligned_cols=107 Identities=19% Similarity=0.279 Sum_probs=90.2
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeCCCCCe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISNSESPV 114 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~rT~vi~~t~nP~ 114 (546)
..+.|.|+|++|++|+.+|. .|++||||+|.+.+ ....+|+++++++||+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~--------------------------~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~ 88 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDA--------------------------NGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPE 88 (166)
T ss_dssp TTTEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEEETC---CCEEECCCCCSCSSCE
T ss_pred CCCEEEEEEEEeECCCCccC--------------------------CCCCCcEEEEEEECCCCccceEeCCcccCCCCCc
Confidence 56899999999999998875 46699999999965 2455999999999999
Q ss_pred EeeEEEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccCCCC
Q 009008 115 WMQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRK 173 (546)
Q Consensus 115 WNE~F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~ 173 (546)
|||+|.|.+... ...|.|+|||++.++ +++||++.|++.++. ...+.|++|....++
T Consensus 89 wne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~--~~~~~W~~l~~~~~~ 149 (166)
T 2cm5_A 89 FNEEFFYDIKHSDLAKKSLDISVWDYDIGKSNDYIGGCQLGISAKG--ERLKHWYECLKNKDK 149 (166)
T ss_dssp EEEEEEEECCGGGGGGCEEEEEEEECCSSSCCEEEEEEEEETTCCH--HHHHHHHHHHHCTTC
T ss_pred ccceEEEEcchHhcCCCEEEEEEEECCCCCCCcEEEeEEEecccCC--chhHHHHHHHhCCCC
Confidence 999999998643 368999999999987 789999999998763 355678888766554
No 36
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=99.69 E-value=1.2e-17 Score=179.33 Aligned_cols=163 Identities=14% Similarity=0.096 Sum_probs=115.5
Q ss_pred ccCceEEEeeccccCCCCCCeEEecCCccccchhhHHHHHHHHHhccceEEEEEEeecceeeEEeCCCCchHHHHHHHhh
Q 009008 217 RRGGKVTLYQDAHAHDGCLADLKLDGGVQFNHESCWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIK 296 (546)
Q Consensus 217 ~~g~~v~l~~dg~~~~~~~~~v~l~~g~~y~~~~~f~~l~~aI~~Ak~~I~I~~w~~~~~~~l~~~~~~~~~l~~~L~~k 296 (546)
..||+|+++.+|++ +|++++++|++|+++|+|++| ++.++..+..|.++|.+|
T Consensus 24 ~~~n~v~~l~~g~~--------------------~~~~l~~~I~~A~~~I~i~~~-------~~~~d~~g~~l~~aL~~a 76 (458)
T 3hsi_A 24 LQAEQIEFLGSSAE--------------------FKTQIIELIRNAKKRIYVTAL-------YWQKDEAGQEILDEIYRV 76 (458)
T ss_dssp CCGGGEEECCCHHH--------------------HHHHHHHHHHTCSSEEEEEES-------CBCSSHHHHHHHHHHHHH
T ss_pred ccCCeEEEEeCHHH--------------------HHHHHHHHHHhcCCEEEEEEE-------EEecCcHHHHHHHHHHHH
Confidence 36899999999986 899999999999999999999 667777789999999999
Q ss_pred hcC--CCeEEEEEecCCcc-ccccCCcccCccCC-CcHHHHHhhcCCC--cEEE--Ecc-CCCCCCccceeccccccccc
Q 009008 297 SQE--GVRVLILAWDDPTS-RSILGYKTDGIMST-NDEETRRFFKHSS--VQVL--LCP-RSAGKGHSFVKKQEVGTIYT 367 (546)
Q Consensus 297 a~r--GV~VriLvwD~~~s-~~~~~~~~~~~~~~-~~~~~~~~l~~~g--v~v~--~~p-~~~~~~~~~~~~~~~~~~~~ 367 (546)
|+| ||+||||+ |.... +...| .... .+......|.++| |+|. ++. +. .....+.+
T Consensus 77 a~r~~GV~Vril~-D~~~~~r~~~g-----~~~~~~~~~~~~~L~~~g~nv~v~~~~f~~p~----------~~~~~~~r 140 (458)
T 3hsi_A 77 KQENPHLDVKVLI-DWHRAQRNLLG-----AEKSATNADWYCEQRQTYQLPDDPNMFFGVPI----------NTREVFGV 140 (458)
T ss_dssp HHHSTTCEEEEEE-ETTGGGSCCC----------CCHHHHHHHHHHHHTCTTCCCCEEEECS----------SSSGGGCC
T ss_pred HhcCCCCEEEEEE-ECccccccccc-----cccccccHHHHHHHHhhCCCceEeeeecCCcc----------ccccccCc
Confidence 999 99999996 87321 10000 0000 1123444555545 6666 552 21 01135678
Q ss_pred cccceEEEccCcccccceEEEEEccccccCcccCCCCCCcccccccccCCCCCCCCCCCCCCCCCCCCeeeccccccChH
Q 009008 368 HHQKTVVVDADAGQFKRKIIAFVGGLDLCKGRYDTPAHPLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGPA 447 (546)
Q Consensus 368 ~HqK~vVID~~~~~~~~~~vAfvGG~nl~~~r~d~~~H~~~~~~~~~~~~d~~~~~~~~~~~~~~~~pWhD~~~~i~Gpa 447 (546)
+|+|++|||+ .+ ++||+||+++|+... .....|+|+. +.||.
T Consensus 141 ~H~Ki~viD~--------~v-~~~G~Ni~d~y~~~~---------------------------~~~~~drd~~--i~g~~ 182 (458)
T 3hsi_A 141 LHVKGFVFDD--------TV-LYSGASINNVYLHQF---------------------------EKYRYDRYQK--ITHAE 182 (458)
T ss_dssp EECCEEEETT--------EE-EEESCCBSTTTTTCS---------------------------SCCEECCEEE--EECHH
T ss_pred ceeeEEEECC--------CE-EEEeeecCHHHhcCC---------------------------cccCcchhhh--hcCch
Confidence 9999999999 68 556699999887521 1223588844 88999
Q ss_pred HHHHHHHHHH--HHh
Q 009008 448 AYDILTNFEE--RWL 460 (546)
Q Consensus 448 a~dl~~~F~~--rW~ 460 (546)
+.|....|.+ .|+
T Consensus 183 ~~D~~~~~~~~~~~~ 197 (458)
T 3hsi_A 183 LADSMVNFINDYLLD 197 (458)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHhhhhc
Confidence 9998888844 454
No 37
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.68 E-value=3.8e-17 Score=148.41 Aligned_cols=111 Identities=21% Similarity=0.270 Sum_probs=89.5
Q ss_pred eceEEEEEEEEeecCCCC-CccccccccccccccccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeeeCCCCCeE
Q 009008 39 LHGNLDIWVKEAKNLPNM-DMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--AVIGRTFVISNSESPVW 115 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~--~~~~rT~vi~~t~nP~W 115 (546)
..|.|.|+|++|++|+.. |..+. ....+.+||||+|.+.. ....||+++++++||+|
T Consensus 24 ~~~~L~V~v~~a~~L~~~~d~~g~--------------------~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~w 83 (147)
T 2enp_A 24 LHNHLTVRVIEARDLPPPISHDGS--------------------RQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVF 83 (147)
T ss_dssp TTTEEEEEEEEEECCCCSCSSCCS--------------------SCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCC
T ss_pred CCCEEEEEEEEEeCCCCccccccc--------------------cccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeE
Confidence 568999999999999973 43100 00135799999999952 23459999999999999
Q ss_pred eeEEEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeecccccc
Q 009008 116 MQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILN 169 (546)
Q Consensus 116 NE~F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~ 169 (546)
||+|.|.+... ...|.|+|||++.++ +++||++.|+|+++..+.....|++|..
T Consensus 84 ne~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~ 141 (147)
T 2enp_A 84 EERYTFEIPFLEAQRRTLLLTVVDFDKFSRHCVIGKVSVPLCEVDLVKGGHWWKALIP 141 (147)
T ss_dssp CBCCEECCCHHHHHHSEEEEEEECCSTTCCSCCCEEEEEETTTSCTTTCCCEEECCBC
T ss_pred eeeEEEEeChHHhccCEEEEEEEECCCCcCCcEEEEEEEechhcCCCCCccEEEEeec
Confidence 99999998642 358999999999887 7899999999999987777788999864
No 38
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.67 E-value=2.7e-16 Score=159.60 Aligned_cols=127 Identities=23% Similarity=0.274 Sum_probs=100.7
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEE--CCEEEeeeeeeeCCCCCeEe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSI--CGAVIGRTFVISNSESPVWM 116 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l--~~~~~~rT~vi~~t~nP~WN 116 (546)
..+.|.|+|++|++|+.+|. .|.+||||+|.+ ++....||+++++++||+||
T Consensus 18 ~~~~L~v~v~~a~~L~~~d~--------------------------~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wn 71 (296)
T 1dqv_A 18 GSDQLVVRILQALDLPAKDS--------------------------NGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFN 71 (296)
T ss_dssp SSCEEEEEEEEEECCCCCST--------------------------TSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEE
T ss_pred CCCEEEEEEEEeECCCCcCC--------------------------CCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEe
Confidence 35889999999999998886 467999999999 23334499999999999999
Q ss_pred eEEEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEe-ceeccC-CCeeeeccccccCCCCcccCCceEEEEEEeecc
Q 009008 117 QHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIP-VEKLCS-GDKIEGAFPILNSSRKPCKAGAVLSLSIQYTPV 190 (546)
Q Consensus 117 E~F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~-l~~l~~-g~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~P~ 190 (546)
|+|.|.+... ...|.|+|||+|.++ +++||++.|+ +.++.. +...+.|++|....+.. ...|.+.+.+.|.|.
T Consensus 72 e~f~f~v~~~~l~~~~L~~~V~d~d~~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~-~~~G~i~vsl~y~~~ 150 (296)
T 1dqv_A 72 ETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEK-ADLGELNFSLCYLPT 150 (296)
T ss_dssp EEEEEECCGGGGSSCCCEEEEEECCSSSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCC-SCCCEEEEEEEEETT
T ss_pred eEEEEEecHHHhcCCEEEEEEEEcCCCCCCceEEEEEeccccccccCCccceeeeccccccccc-cccceEEEEEEeccc
Confidence 9999998533 358999999999987 8899999996 444443 44567899997654332 245899999999885
Q ss_pred cc
Q 009008 191 EN 192 (546)
Q Consensus 191 ~~ 192 (546)
..
T Consensus 151 ~~ 152 (296)
T 1dqv_A 151 AG 152 (296)
T ss_dssp TT
T ss_pred cc
Confidence 43
No 39
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.67 E-value=3.1e-16 Score=139.98 Aligned_cols=118 Identities=17% Similarity=0.278 Sum_probs=104.3
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeee-CCCCCeEeeE
Q 009008 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVIS-NSESPVWMQH 118 (546)
Q Consensus 40 ~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~rT~vi~-~t~nP~WNE~ 118 (546)
|=.|.|+|.+|++|+ |++|||++|.+.+.++ +||+++ ++.||+|||.
T Consensus 20 ~msL~V~l~~a~~Lp-------------------------------g~~Dp~akv~FRg~k~-kTkvi~~~~~npvfnE~ 67 (144)
T 3l9b_A 20 HMALIVHLKTVSELR-------------------------------GRADRIAKVTFRGQSF-YSRVLENCEDVADFDET 67 (144)
T ss_dssp CEEEEEEEEEEESCC-------------------------------SCEEEEEEEEETTEEE-ECCCEEEECSCEEEEEE
T ss_pred cEEEEEEEEEecCCC-------------------------------CCCCCeEEEEEeccce-eeEEeccCCCCceEcce
Confidence 345899999999998 2379999999988888 999998 6999999999
Q ss_pred EEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccCCCCcccCCceEEEEEEeeccc
Q 009008 119 FNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYTPVE 191 (546)
Q Consensus 119 F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~P~~ 191 (546)
|.|++..+ .+.|+|.|+|++.++ +.+||++.++|.++..++....+.+|.+.+++++ ++.|.+.++|.|..
T Consensus 68 F~wpl~~~ld~~e~L~v~V~d~~~v~~nrlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~--~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 68 FRWPVASSIDRNEVLEIQIFNYSKVFSNKLIGTFRMVLQKVVEENRVEVSDTLIDDNNAII--KTSLSMEVRYQAAD 142 (144)
T ss_dssp EEEEESSCCCTTCEEEEEEEEECTTSCCEEEEEEEEESHHHHHHSEEEEEEEEECTTSCEE--EEEEEEEEEEEETT
T ss_pred EEecCCCCCCCCCEEEEEEEECccccCCCEEEEEEEEhHHhccCCeEEEeecccCCCCCcc--ccEEEEEEEecCCC
Confidence 99998643 488999999999987 8899999999999998888888899999998875 37999999998854
No 40
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.66 E-value=5.6e-16 Score=138.47 Aligned_cols=114 Identities=18% Similarity=0.256 Sum_probs=79.0
Q ss_pred eEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeee-CCCCCeEeeEE
Q 009008 41 GNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVIS-NSESPVWMQHF 119 (546)
Q Consensus 41 g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~rT~vi~-~t~nP~WNE~F 119 (546)
+.|.|+|++|++|+. .|++||||+|.. +.. +|+++. ++.||+|||+|
T Consensus 5 ~~L~V~V~~A~~l~~-----------------------------~g~~DPYv~v~~--~~~-kt~~~~~~t~nP~WnE~f 52 (131)
T 2cjt_A 5 SLLCVGVKKAKFDGA-----------------------------QEKFNTYVTLKV--QNV-KSTTIAVRGSQPSWEQDF 52 (131)
T ss_dssp EEEEEEEEEEECSSC-----------------------------GGGCEEEEEEEE--TTE-EEECCCEESSSCEEEEEE
T ss_pred eEEEEEEEEeECCCC-----------------------------CCCcCeEEEEEe--cCE-EEeEecCCCCCceECCEE
Confidence 889999999998852 234899999992 233 566554 69999999999
Q ss_pred EEeecCCCceEEEEEEecCCcC-CeeeEeEEEeceeccCCC------eeeeccccccCCCCcc----cCCceEEEEEEe
Q 009008 120 NVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGD------KIEGAFPILNSSRKPC----KAGAVLSLSIQY 187 (546)
Q Consensus 120 ~~~v~~~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~------~~~~W~~L~~~~g~~~----k~~g~I~l~l~f 187 (546)
.|.+......|.|+|||+| ++ +++||++.|||+++.... -...|+++...+|+.+ ...+.+.+.++|
T Consensus 53 ~f~v~~~~~~L~~~V~D~d-~~~dd~iG~~~i~l~~l~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~p~~~~~~~~~~~ 130 (131)
T 2cjt_A 53 MFEINRLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHF 130 (131)
T ss_dssp EEEECCCSSEEEEEEEECC-SSCEEEEEEEEEEGGGSCBCSSCCCCEEEECBC----------CCSCCCCCEEEEEEEE
T ss_pred EEEEeCCCCeEEEEEEECC-CCCCCeEEEEEEEHHHhhhcCCCCccccEEcccccccCCCcCcceECCCccEEEEEEEe
Confidence 9999877788999999999 65 889999999999986432 1223444443444321 122346666665
No 41
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=99.65 E-value=4.7e-16 Score=142.18 Aligned_cols=133 Identities=18% Similarity=0.231 Sum_probs=104.7
Q ss_pred hHHHHHHHHHhccceEEEEEEeecceeeEEeCCCCchHHHHHHHhhhcCCCeEEEEEecCCccccccCCcccCccCCCcH
Q 009008 251 CWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMSTNDE 330 (546)
Q Consensus 251 ~f~~l~~aI~~Ak~~I~I~~w~~~~~~~l~~~~~~~~~l~~~L~~ka~rGV~VriLvwD~~~s~~~~~~~~~~~~~~~~~ 330 (546)
.++.+.++|++|+++|+|+.|.+ .+ ..|.++|.+|++|||+|+||+ |..++... ...
T Consensus 15 ~~~~~~~~i~~A~~~I~i~~~~~-------~~----~~i~~aL~~a~~rGV~Vril~-~~~~~~~~-----------~~~ 71 (155)
T 1byr_A 15 ARVLVLSAIDSAKTSIRMMAYSF-------TA----PDIMKALVAAKKRGVDVKIVI-DERGNTGR-----------ASI 71 (155)
T ss_dssp HHHHHHHHHHHCSSEEEEEESSB-------CC----HHHHHHHHHHHHTTCEEEEEE-ESTTCCSH-----------HHH
T ss_pred HHHHHHHHHHHHhhEEEEEEEEe-------CC----HHHHHHHHHHHHCCCEEEEEE-eCcccccc-----------ccH
Confidence 68999999999999999999844 22 689999999999999999996 65543110 123
Q ss_pred HHHHhhcCCCcEEEEccCCCCCCccceeccccccccccccceEEEccCcccccceEEEEEccccccCcccCCCCCCcccc
Q 009008 331 ETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLCKGRYDTPAHPLFKT 410 (546)
Q Consensus 331 ~~~~~l~~~gv~v~~~p~~~~~~~~~~~~~~~~~~~~~HqK~vVID~~~~~~~~~~vAfvGG~nl~~~r~d~~~H~~~~~ 410 (546)
...+.|.++|+++..+.+. ..+|.|++|||+ .++++||.|++...+
T Consensus 72 ~~~~~L~~~gv~v~~~~~~----------------~~~H~K~~iiD~--------~~~~iGS~N~~~~~~---------- 117 (155)
T 1byr_A 72 AAMNYIANSGIPLRTDSNF----------------PIQHDKVIIVDN--------VTVETGSFNFTKAAE---------- 117 (155)
T ss_dssp HHHHHHHHTTCCEEEECSS----------------SCCCCCEEEETT--------TEEEEESCCBSHHHH----------
T ss_pred HHHHHHHHCCCeEEEcCCc----------------ccccceEEEECC--------CEEEEECCCCCcccc----------
Confidence 4556677889998876321 257999999999 699999999986422
Q ss_pred cccccCCCCCCCCCCCCCCCCCCCCeeeccccccCh--HHHHHHHHHHHHHhhcc
Q 009008 411 LETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGP--AAYDILTNFEERWLKAS 463 (546)
Q Consensus 411 ~~~~~~~d~~~~~~~~~~~~~~~~pWhD~~~~i~Gp--aa~dl~~~F~~rW~~~~ 463 (546)
..+++.++.++|+ .+.++...|++.|+.+.
T Consensus 118 -----------------------~~n~E~~~~i~~~~~l~~~~~~~f~~~w~~~~ 149 (155)
T 1byr_A 118 -----------------------TKNSENAVVIWNMPKLAESFLEHWQDRWNQGR 149 (155)
T ss_dssp -----------------------HTSCEEEEEEESCHHHHHHHHHHHHHHHHTCE
T ss_pred -----------------------ccCcccEEEEcCcHHHHHHHHHHHHHHHHhCC
Confidence 1357889999994 79999999999998753
No 42
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=99.62 E-value=3.5e-16 Score=151.76 Aligned_cols=152 Identities=16% Similarity=0.146 Sum_probs=107.7
Q ss_pred chhhHHHHHHHHHhccceEEEEEEeecceeeEEeCCCCchHHHHHHHhhhcCCCeEEEEEecCCccccccCCcccCccCC
Q 009008 248 HESCWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMST 327 (546)
Q Consensus 248 ~~~~f~~l~~aI~~Ak~~I~I~~w~~~~~~~l~~~~~~~~~l~~~L~~ka~rGV~VriLvwD~~~s~~~~~~~~~~~~~~ 327 (546)
..+.++.|+++|++|+++|+|+.|. +.+ ..|.++|++|++|||+||||+ |..++...
T Consensus 56 ~~~~~~~ii~~I~~A~~sI~i~~Y~-------~~~----~~I~~aL~~Aa~RGV~VRii~-D~~~~~~~----------- 112 (220)
T 4gel_A 56 SLRNVAKIVEQIDRAVYSIDLAIYT-------FTS----LFLADSIKRALQRGVIIRIIS-DGEMVYSK----------- 112 (220)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEECSC-------BCC----HHHHHHHHHHHHHTCEEEEEC-CTTTTTST-----------
T ss_pred cHHHHHHHHHHHHHhhhEEEEEEEE-------eCC----HHHHHHHHHHHHcCCeEEEEE-echhhhhh-----------
Confidence 3457999999999999999999984 444 689999999999999999996 87655321
Q ss_pred CcHHHHHhhcCCCcEEEEccCCCCCCcccee-c---cccccccccccceEEEccCcccccceEEEEEccccccCcccCCC
Q 009008 328 NDEETRRFFKHSSVQVLLCPRSAGKGHSFVK-K---QEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLCKGRYDTP 403 (546)
Q Consensus 328 ~~~~~~~~l~~~gv~v~~~p~~~~~~~~~~~-~---~~~~~~~~~HqK~vVID~~~~~~~~~~vAfvGG~nl~~~r~d~~ 403 (546)
......+..+++.+............++- + .......++|+|++|+|+ .++++||+|++....
T Consensus 113 --~~~~~~~~~~~~~~~~~~~~~~~h~K~~viD~~~~~~~~~~~~H~K~~v~D~--------~~v~~GS~N~t~~s~--- 179 (220)
T 4gel_A 113 --GSQISMLAQLGVPVRVPITTNLMHNKFCIIDGFERVEEIRLLRKLKFMRPCY--------SIVISGSVNWTALGL--- 179 (220)
T ss_dssp --TCHHHHHHHTTCCEEECCSSSCBCCCEEEESCHHHHHHHHHHTTCSCCCCCC--------CEEEEESCCBSHHHH---
T ss_pred --HHHHHHHHhcCCcEEeecccccccceeEEEcchhcccccccccceecccccc--------ceEEecCcccccccc---
Confidence 11233345566655543221111111110 0 011234678888888888 799999999876432
Q ss_pred CCCcccccccccCCCCCCCCCCCCCCCCCCCCeeeccccccChHHHHHHHHHHHHHhhccC
Q 009008 404 AHPLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGPAAYDILTNFEERWLKASK 464 (546)
Q Consensus 404 ~H~~~~~~~~~~~~d~~~~~~~~~~~~~~~~pWhD~~~~i~Gpaa~dl~~~F~~rW~~~~~ 464 (546)
...|.|+.+...|++|.++.+.|.+.|+...+
T Consensus 180 -----------------------------~~N~E~~~vi~~~~~a~~~~~~F~~~W~~~~~ 211 (220)
T 4gel_A 180 -----------------------------GGNWENCIITADDKLTATFQAEFQRMWRAFAK 211 (220)
T ss_dssp -----------------------------HTSBEEEEEECCHHHHHHHHHHHHHHHHHSEE
T ss_pred -----------------------------ccCceEEEEEECHHHHHHHHHHHHHHHHhccC
Confidence 23688999999999999999999999997544
No 43
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.60 E-value=4e-15 Score=165.40 Aligned_cols=121 Identities=26% Similarity=0.374 Sum_probs=101.2
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC----EEEeeeeeeeCC-CCCe
Q 009008 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG----AVIGRTFVISNS-ESPV 114 (546)
Q Consensus 40 ~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~----~~~~rT~vi~~t-~nP~ 114 (546)
.+.|.|+|++|++|+.++.. ..+.+||||+|.+.+ ....||++++++ .||+
T Consensus 496 ~~~L~V~Vi~A~~L~~~d~~------------------------~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~ 551 (624)
T 1djx_A 496 PERLRVRIISGQQLPKVNKN------------------------KNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPR 551 (624)
T ss_dssp CEEEEEEEEEEESCCCCSSC------------------------SSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCE
T ss_pred ceEEEEEEEEcCCCCccccc------------------------ccCCCCcEEEEEEecCCCCcceeecccccCCCCCCc
Confidence 48899999999999987631 146699999999954 234599999997 9999
Q ss_pred EeeEEEEeecCCC-ceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccCCCCcccCCceEEEEEEee
Q 009008 115 WMQHFNVPVAHSA-AEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (546)
Q Consensus 115 WNE~F~~~v~~~~-~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~ 188 (546)
|||+|.|.+..+. ..|+|+|+|+|.++ +++||++.|||++|..|. +|++|.+..|++. ..+.|.+.++|+
T Consensus 552 WnE~f~F~v~~~el~~L~~~V~D~D~~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~-~~~~L~v~i~~~ 623 (624)
T 1djx_A 552 WDMEFEFEVTVPDLALVRFMVEDYDSSSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQH-PSATLFVKISIQ 623 (624)
T ss_dssp EEEEEEEEESCGGGCEEEEEEEECCSSSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEE-EEEEEEEEEEEE
T ss_pred cCceEEEEEecCCCCEEEEEEEEcCCCCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCC-CceEEEEEEEEE
Confidence 9999999987654 78999999999886 899999999999998764 6999999888864 456888888774
No 44
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.60 E-value=3.7e-15 Score=162.13 Aligned_cols=116 Identities=18% Similarity=0.257 Sum_probs=97.7
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCCCeEeeE
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQH 118 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~rT~vi~~t~nP~WNE~ 118 (546)
..|+|.|+|++|++|+.+|. .|++||||+|.+++... +|+++++++||+|||+
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~--------------------------~~~sdpyv~v~~~~~~~-~T~~~~~t~nP~w~e~ 437 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKP--------------------------NGKSNPYCEISMGSQSY-TTRTIQDTLNPKWNFN 437 (510)
T ss_dssp -CEEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEETTEEE-ECCCCSSCSSCEEEEE
T ss_pred CCceEEEEeceeecCCCCCC--------------------------CCCCCeEEEEEECCeec-cCCccCCCCCCccCce
Confidence 34889999999999998886 46799999999988766 9999999999999999
Q ss_pred EEEeecCCC-ceEEEEEEecCCcC-CeeeEeEEEeceeccCCCe----eeeccccccCCCCcccCCceEEEEEEe
Q 009008 119 FNVPVAHSA-AEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDK----IEGAFPILNSSRKPCKAGAVLSLSIQY 187 (546)
Q Consensus 119 F~~~v~~~~-~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~----~~~W~~L~~~~g~~~k~~g~I~l~l~f 187 (546)
|.|.+.... ..|.|+|||+|.++ +++||++.++|+++..+.. ...|++|... ..|+|++.+.+
T Consensus 438 f~f~~~~~~~~~l~~~v~d~d~~~~~d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~------~~G~i~l~~~l 506 (510)
T 3jzy_A 438 CQFFIKDLYQDVLCLTLFDRDQFSPDDFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV------PTGEVWVRFDL 506 (510)
T ss_dssp EEEEESCTTTCEEEEEEEECCSSSSCCEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS------SSCEEEEEEEE
T ss_pred EEEEecCCCCCEEEEEEEeCCCCCCCCceEEEEEEHHHhccccCCCCceeeeecCCCC------CCceEEEEEEE
Confidence 999987654 67999999999988 8899999999999986543 6789998643 23677776665
No 45
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.58 E-value=5.2e-15 Score=137.76 Aligned_cols=84 Identities=21% Similarity=0.280 Sum_probs=71.0
Q ss_pred eEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeee-CCCCCeEeeEE
Q 009008 41 GNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVIS-NSESPVWMQHF 119 (546)
Q Consensus 41 g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~rT~vi~-~t~nP~WNE~F 119 (546)
+.|.|+|++|++|+. .|++||||+|+ .+.. ||++++ ++.||+|||+|
T Consensus 14 ~~L~V~V~~A~~l~~-----------------------------~g~~DPYV~v~--~~~~-kt~~~~~~t~nP~WnE~f 61 (167)
T 2cjs_A 14 SLLCVGVKKAKFDGA-----------------------------QEKFNTYVTLK--VQNV-ESTTIAVRGSQPSWEQDF 61 (167)
T ss_dssp CEEEEEEEEEECSSC-----------------------------GGGCEEEEEEE--ETTE-EEECCCEESSSCEEEEEE
T ss_pred EEEEEEEEEEECCCC-----------------------------CCCCCeEEEEE--ecce-EEEEecCCCCCCCCCCEE
Confidence 789999999998852 24489999999 2333 677665 69999999999
Q ss_pred EEeecCCCceEEEEEEecCCcC-CeeeEeEEEeceeccC
Q 009008 120 NVPVAHSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCS 157 (546)
Q Consensus 120 ~~~v~~~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~ 157 (546)
.|.+.+....|.|+|||+| ++ +++||++.|+|+++..
T Consensus 62 ~f~v~~~~~~L~~~V~D~d-~~~dd~iG~~~i~L~~l~~ 99 (167)
T 2cjs_A 62 MFEINRLDLGLTVEVWNKG-LIWDTMVGTVWIPLRTIRQ 99 (167)
T ss_dssp EEECCCTTSEEEEEEEECC-SSCCEEEEEEEEEGGGSCB
T ss_pred EEEeeCCCCEEEEEEEECC-CCCCceEEEEEEEHHHhcc
Confidence 9999877788999999999 55 8999999999999864
No 46
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.57 E-value=1.4e-14 Score=157.86 Aligned_cols=107 Identities=21% Similarity=0.252 Sum_probs=89.7
Q ss_pred eEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCCCCCeEeeEEE
Q 009008 41 GNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNSESPVWMQHFN 120 (546)
Q Consensus 41 g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~rT~vi~~t~nP~WNE~F~ 120 (546)
|.|.|+|++|++|+. |. .|++||||+|.+++++ .||+++++++||+|||+|.
T Consensus 394 ~~L~V~V~~A~~L~~-D~--------------------------~g~sDPYV~v~l~~~~-~kTkvik~tlNP~Wne~f~ 445 (540)
T 3nsj_A 394 AHLVVSNFRAEHLWG-DY--------------------------TTATDAYLKVFFGGQE-FRTGVVWNNNNPRWTDKMD 445 (540)
T ss_dssp EEEEEEEEEEESCCC-SS--------------------------CSCCCEEEEEEETTEE-EECCCBCSCSSCBCCCCEE
T ss_pred cEEEEEEEEccCCCc-cc--------------------------CCCcCeEEEEEECCEe-eeeeeecCCCCCCCCeEEE
Confidence 899999999999997 76 4569999999999877 5999999999999999999
Q ss_pred Eeec--CCCceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccCCCCcccCCceEEEEEEee
Q 009008 121 VPVA--HSAAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (546)
Q Consensus 121 ~~v~--~~~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~ 188 (546)
|.+. ...+.|.|+|||+|.++ +|+||++.++|. .| ..+.|++|. .|.|++++..+
T Consensus 446 f~~~~~~~~~~L~~~V~D~D~~~~dD~LG~~~~~L~---~g-~~~~~~~l~---------~G~l~~~~~~~ 503 (540)
T 3nsj_A 446 FENVLLSTGGPLRVQVWDADYGWDDDLLGSCDRSPH---SG-FHEVTCELN---------HGRVKFSYHAK 503 (540)
T ss_dssp EEEEETTTCCCEEEEEEECCSSSCCEEEEEEEECCC---SE-EEEEEEECS---------SSEEEEEEEEE
T ss_pred EEEecCCCCCEEEEEEEECCCCCCCCEEEEEEEEee---CC-cEEEEEEcC---------CeEEEEEEEEE
Confidence 9853 35688999999999987 799999999987 34 467888762 15777776654
No 47
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.56 E-value=4.5e-16 Score=168.46 Aligned_cols=124 Identities=19% Similarity=0.344 Sum_probs=23.4
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCEEEeeeeeeeCC---CCCeEe
Q 009008 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGAVIGRTFVISNS---ESPVWM 116 (546)
Q Consensus 40 ~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~~~~rT~vi~~t---~nP~WN 116 (546)
.|.|+|+|++|++|+++ .||||++.++++.++||++++++ +||+||
T Consensus 10 ~~~L~V~VieAk~L~~~-------------------------------ddpYv~v~l~~~~~~kT~v~~kt~~glnP~Wn 58 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPK-------------------------------KRYYCELCLDDMLYARTTSKPRSASGDTVFWG 58 (483)
T ss_dssp EECC----------------------------------------------------------------------------
T ss_pred ccEEEEEEEEcCCcCCC-------------------------------CCCeEEEEECCeEEeeeeEEeCCCCCCCCccc
Confidence 48999999999999853 28999999998877899999999 999999
Q ss_pred eEEEEeecCCCceEEEEEEec-CC---cC-CeeeEeEEEeceeccCCCeeeeccccccCCC-------------------
Q 009008 117 QHFNVPVAHSAAEVHFVVKDN-DF---VG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSR------------------- 172 (546)
Q Consensus 117 E~F~~~v~~~~~~l~~~V~D~-d~---~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g------------------- 172 (546)
|+|.|.+.+....|.|+|||. |. .+ +++||++.|+++++..+...+.|++|.+..+
T Consensus 59 E~F~f~~~~~~~~L~v~V~d~~d~~~~~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~~~~~~~s~~~~~~~~~~~~~~~ 138 (483)
T 3bxj_A 59 EHFEFNNLPAVRALRLHLYRDSDKKRKKDKAGYVGLVTVPVATLAGRHFTEQWYPVTLPTGSGGSGGMGSGGGGGSGGGS 138 (483)
T ss_dssp CCEECC------------------------------------------CCEECC--------------------------
T ss_pred cEEEEecCCCccEEEEEEEecCCccccCCCCceEEEEEEEHHHhcCCCCCCeEEECCCCCCccccccccccccccccccc
Confidence 999999765568899999994 42 34 8899999999999998888899999975432
Q ss_pred --CcccCCceEEEEEEeecccccc
Q 009008 173 --KPCKAGAVLSLSIQYTPVENMS 194 (546)
Q Consensus 173 --~~~k~~g~I~l~l~f~P~~~~~ 194 (546)
+..+..|.|+|+++|.+...++
T Consensus 139 ~~~~~~~~G~lrL~v~~~~~~vlP 162 (483)
T 3bxj_A 139 GGKGKGGCPAVRLKARYQTMSILP 162 (483)
T ss_dssp ------------CEEEEEECCBCC
T ss_pred cccCCCCCceEEEEEEeeeeeecc
Confidence 1112357899999998765433
No 48
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.52 E-value=5.4e-14 Score=141.27 Aligned_cols=103 Identities=27% Similarity=0.385 Sum_probs=83.1
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC--CE--EEeeeeeeeCCCCCe
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC--GA--VIGRTFVISNSESPV 114 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~--~~--~~~rT~vi~~t~nP~ 114 (546)
..+.|.|+|++|++|+.+|. .|.+||||+|.+. +. ...+|+++++++||+
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~--------------------------~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~ 201 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDV--------------------------GGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPY 201 (284)
T ss_dssp TTTEEEEEEEEEESCCCCST--------------------------TSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCE
T ss_pred cCCceEEEEEEeECCCCcCC--------------------------CCCcCeEEEEEEEeCCcEeeeeccceecCCCCCE
Confidence 46789999999999998876 4669999999994 32 345999999999999
Q ss_pred EeeEEEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeecccccc
Q 009008 115 WMQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILN 169 (546)
Q Consensus 115 WNE~F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~ 169 (546)
|||+|.|.+... ...|.|+|||++.++ +++||++.|+++.+. ....+|++|+.
T Consensus 202 wne~f~f~v~~~~l~~~~l~i~V~d~d~~~~~~~iG~~~i~l~~~~--~~~~~w~~~~~ 258 (284)
T 2r83_A 202 YNESFSFEVPFEQIQKVQVVVTVLDYDKIGKNDAIGKVFVGYNSTG--AELRHWSDMLA 258 (284)
T ss_dssp EEEEEEEECCTTTGGGEEEEEEEEECCSSSCCCEEEEEEEETTCCH--HHHHHHHHHHH
T ss_pred EceeEEEeCCHHHhCceEEEEEEEeCCCCCCCcEEEEEEECCCCCC--cHHHHHHHHHH
Confidence 999999998654 357999999999987 889999999997642 23345555543
No 49
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.50 E-value=2e-14 Score=161.32 Aligned_cols=104 Identities=24% Similarity=0.356 Sum_probs=91.4
Q ss_pred ceEEEEEEEEeecCCC---CCccccccccccccccccccccccccCCCCCCCCcEEEEEECC--EEEeeeeeeeCCCCCe
Q 009008 40 HGNLDIWVKEAKNLPN---MDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG--AVIGRTFVISNSESPV 114 (546)
Q Consensus 40 ~g~L~V~I~~A~~L~~---~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~--~~~~rT~vi~~t~nP~ 114 (546)
.|.|.|+|++|++|+. +|. .|++||||+|.+.+ ....||+++++++||+
T Consensus 17 ~g~L~V~Vi~A~nL~~~~~~D~--------------------------~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPv 70 (749)
T 1cjy_A 17 SHKFTVVVLRATKVTKGAFGDM--------------------------LDTPDPYVELFISTTPDSRKRTRHFNNDINPV 70 (749)
T ss_dssp CEEEEEEEEEEECCCSCHHHHH--------------------------HCCCCEEEEEECTTSTTCCEECCCCTTCSSCE
T ss_pred ccEEEEEEEEEECCCCccccCC--------------------------CCCcCeEEEEEEecCCCCeEecceEcCCCCCe
Confidence 4899999999999997 654 35699999999984 2344999999999999
Q ss_pred EeeEEEEeecC-CCceEEEEEEecCCcCCeeeEeEEEeceeccCCCeeeecccccc
Q 009008 115 WMQHFNVPVAH-SAAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEGAFPILN 169 (546)
Q Consensus 115 WNE~F~~~v~~-~~~~l~~~V~D~d~~~~d~IG~~~i~l~~l~~g~~~~~W~~L~~ 169 (546)
|||+|.|.+.. ....|.|+|||+|.+++++||++.|+|++|..+...+.|++|..
T Consensus 71 WNEtF~F~v~~~~~~~L~~~V~D~D~~~ddfIG~v~I~L~~L~~g~~~~~w~~L~~ 126 (749)
T 1cjy_A 71 WNETFEFILDPNQENVLEITLMDANYVMDETLGTATFTVSSMKVGEKKEVPFIFNQ 126 (749)
T ss_dssp EEEEEEEEECTTSCCBCEEEEEECCSSSCEEEEEECCBSTTSCTTCCCCEEEEETT
T ss_pred eeeEEEEEecCCCCCEEEEEEEECCCCCCceeEEEEEEHHHcCCCCceEEEEecCC
Confidence 99999999976 45789999999999888899999999999998888899999953
No 50
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.46 E-value=2.6e-14 Score=144.90 Aligned_cols=109 Identities=28% Similarity=0.380 Sum_probs=88.8
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC--C--EEEeeeeeeeCCCCCeE
Q 009008 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC--G--AVIGRTFVISNSESPVW 115 (546)
Q Consensus 40 ~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~--~--~~~~rT~vi~~t~nP~W 115 (546)
.|.|.|+|++|++|+.+|. .|.+||||+|.+. + ....||+++++++||+|
T Consensus 151 ~~~l~v~v~~a~~L~~~d~--------------------------~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~w 204 (296)
T 1dqv_A 151 AGLLTVTIIKASNLKAMDL--------------------------TGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTY 204 (296)
T ss_dssp TTEEEEEEEEEESCCCCSS--------------------------SSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEE
T ss_pred cceeEEEEEEeecCCccCC--------------------------CCCCCcEEEEEEEeCCcCccceecceecCCCCCeE
Confidence 5899999999999998886 4568999999995 3 23449999999999999
Q ss_pred eeEEEEeecCC---CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccCCCCcc
Q 009008 116 MQHFNVPVAHS---AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPC 175 (546)
Q Consensus 116 NE~F~~~v~~~---~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~~~ 175 (546)
||+|.|.+... ...|.|+|||++.++ +++||.+.|+++++.. ...++|++|+...++++
T Consensus 205 ne~f~f~v~~~~l~~~~L~i~V~d~d~~~~~~~iG~~~i~l~~~~~-~~~~~W~~~~~~~~~~~ 267 (296)
T 1dqv_A 205 NEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIGVCRVGPEAADP-HGREHWAEMLANPRKPV 267 (296)
T ss_dssp EECCCCCCCSGGGGSCCCCCEEEECCSSSCCEEEEECCCSSCTTCH-HHHHHHHTSSSSSSSCS
T ss_pred CceEEEEcCHHHccCcEEEEEEEeCCCCCCCceEEEEEECCccCCc-hhHHHHHHHHhCCCCce
Confidence 99999998754 247999999999987 8999999999987532 14567888876555543
No 51
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=99.43 E-value=2.6e-13 Score=151.24 Aligned_cols=140 Identities=12% Similarity=0.112 Sum_probs=106.7
Q ss_pred hHHHHHHHHHhccc-----eEEEEEEeecceeeEEeCCCCchHHHHHHHhhhcCCCeEEEEEecCCccccccCCcccCcc
Q 009008 251 CWQDVYDAINQARR-----LIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIM 325 (546)
Q Consensus 251 ~f~~l~~aI~~Ak~-----~I~I~~w~~~~~~~l~~~~~~~~~l~~~L~~ka~rGV~VriLvwD~~~s~~~~~~~~~~~~ 325 (546)
.|+.+++.|++|++ +|+|+.|. +.+ ...+.++|++||++||+|+||+ |..+....
T Consensus 348 sf~~v~~~I~~A~~dp~v~~I~it~Y~-------~~~---d~~I~~AL~~AA~rGV~VrVLv-d~~a~~~~--------- 407 (687)
T 1xdp_A 348 TFEHVLELLRQASFDPSVLAIKINIYR-------VAK---DSRIIDSMIHAAHNGKKVTVVV-ELQARFDE--------- 407 (687)
T ss_dssp CTHHHHHHHHHHHHCTTEEEEEEEESS-------CCT---TCHHHHHHHHHHHTTCEEEEEE-CTTCSSTT---------
T ss_pred hhhhHHHHHHHHhhCCcceEEEEEeee-------ecC---cHHHHHHHHHHHhcCCEEEEEE-CCCcccch---------
Confidence 68999999999997 99999884 322 2799999999999999999997 87663211
Q ss_pred CCCcHHHHHhhcCCCcEEEEccCCCCCCccceeccccccccccccceEEEccCcccccceEE---EEEccccccCcccCC
Q 009008 326 STNDEETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKII---AFVGGLDLCKGRYDT 402 (546)
Q Consensus 326 ~~~~~~~~~~l~~~gv~v~~~p~~~~~~~~~~~~~~~~~~~~~HqK~vVID~~~~~~~~~~v---AfvGG~nl~~~r~d~ 402 (546)
..+....+.|.++||++..+.+ .+++|+|++|||+...+ .+ ||+||.|+....+
T Consensus 408 -~~n~~~~~~L~~aGV~V~~~~~----------------~~k~H~Ki~VID~re~~----~i~~~a~iGS~N~d~rs~-- 464 (687)
T 1xdp_A 408 -EANIHWAKRLTEAGVHVIFSAP----------------GLKIHAKLFLISRKENG----EVVRYAHIGTGNFNEKTA-- 464 (687)
T ss_dssp -TTTTTTTHHHHHHTCEEEECCT----------------TCEECCEEEEEEEEETT----EEEEEEEEESSCSCTTGG--
T ss_pred -hhHHHHHHHHHHCCCEEEEecC----------------CccccceEEEEEeccCC----eEEEEEEEeCCcCCcchh--
Confidence 0122345667889999986532 24689999999941111 45 9999999876322
Q ss_pred CCCCcccccccccCCCCCCCCCCCCCCCCCCCCeeeccccccCh-HHHHHHHHHHHHHhhccC
Q 009008 403 PAHPLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGP-AAYDILTNFEERWLKASK 464 (546)
Q Consensus 403 ~~H~~~~~~~~~~~~d~~~~~~~~~~~~~~~~pWhD~~~~i~Gp-aa~dl~~~F~~rW~~~~~ 464 (546)
..|+|+++.+.|| +|.++...|...|.....
T Consensus 465 -------------------------------~~n~D~~l~i~~~~i~~~l~~~F~~~~~~s~~ 496 (687)
T 1xdp_A 465 -------------------------------RLYTDYSLLTADARITNEVRRVFNFIENPYRP 496 (687)
T ss_dssp -------------------------------GTEEEEEEEECCHHHHHHHHHHHHHHHCTTSC
T ss_pred -------------------------------hhcceEEEEEeCHHHHHHHHHHHHHHHhhccc
Confidence 2579999999987 699999999999987544
No 52
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.31 E-value=4.7e-12 Score=143.55 Aligned_cols=113 Identities=23% Similarity=0.346 Sum_probs=90.7
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECCE------EEeeeeeeeC-CCC
Q 009008 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICGA------VIGRTFVISN-SES 112 (546)
Q Consensus 40 ~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~~------~~~rT~vi~~-t~n 112 (546)
.++|.|+|++|++|+.. .+||||+|.+.+. ...||+++++ +.|
T Consensus 649 ~~~L~V~Visaq~L~~~------------------------------~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglN 698 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK------------------------------QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMD 698 (816)
T ss_dssp CEEEEEEEEEEECCCSS------------------------------CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSC
T ss_pred ceEEEEEEEEcccCCCC------------------------------CCCCeEEEEEeCCCcccccceeeeEEecCCCCC
Confidence 37899999999999742 2799999999641 3339999986 699
Q ss_pred CeEeeE-EEEe-ecCC-CceEEEEEEecCCcCCeeeEeEEEeceeccCCCeeeeccccccCCCCcccCCceEEEEEEeec
Q 009008 113 PVWMQH-FNVP-VAHS-AAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYTP 189 (546)
Q Consensus 113 P~WNE~-F~~~-v~~~-~~~l~~~V~D~d~~~~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~P 189 (546)
|+|||+ |.|. +..+ ...|+|+|+|++ +++||++.|||+.|..|. ++++|.+..|++. ..+.|.+.+....
T Consensus 699 PvWNE~~F~F~~v~~pela~Lrf~V~D~d---ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~-~~atLfv~i~~~~ 771 (816)
T 3qr0_A 699 PYYDEKVFVFKKVVLPDLAVVRIIVSEEN---GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPL-GLASVFAHIVAKD 771 (816)
T ss_dssp CBCCCCCEEEEEESCGGGCEEEEEEEETT---SCEEEEEEEESTTCCCEE---EEEEEECTTSCEE-EEEEEEEEEEEEE
T ss_pred CeEcCceeEEccccCCCccEEEEEEEecC---CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCC-CceEEEEEEEEEe
Confidence 999998 9998 6544 368999999985 789999999999998774 5899999988865 3356777766643
No 53
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.31 E-value=5.7e-12 Score=143.42 Aligned_cols=112 Identities=24% Similarity=0.308 Sum_probs=89.6
Q ss_pred ceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC-----EEEeeee-eeeC-CCC
Q 009008 40 HGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG-----AVIGRTF-VISN-SES 112 (546)
Q Consensus 40 ~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~-----~~~~rT~-vi~~-t~n 112 (546)
.|+|.|+|++|++|+.. ++||||+|.+.+ .+..||+ ++++ +.|
T Consensus 677 ~~~L~V~Visa~~L~~~------------------------------~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~N 726 (799)
T 2zkm_X 677 ATTLSITVISGQFLSER------------------------------SVRTYVEVELFGLPGDPKRRYRTKLSPSTNSIN 726 (799)
T ss_dssp CEEEEEEEEEEESCCSS------------------------------CCCEEEEEEEECCTTSCCCCEECCCCSSSCCSS
T ss_pred eeeEEEEEEeccccCcc------------------------------CCCcEEEEEEEecCCCcccceeecccccCCCCC
Confidence 48899999999999842 279999999943 1234999 8865 699
Q ss_pred CeEee-EEEE-eecCC-CceEEEEEEecCCcCCeeeEeEEEeceeccCCCeeeeccccccCCCCcccCCceEEEEEEee
Q 009008 113 PVWMQ-HFNV-PVAHS-AAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (546)
Q Consensus 113 P~WNE-~F~~-~v~~~-~~~l~~~V~D~d~~~~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~ 188 (546)
|+||| +|.| .+..+ ...|+|+|+|++ +++||++.|||+.|..|. +|++|.+..|.++ ..+.+.+.+++.
T Consensus 727 PvWnEe~f~F~~v~~~el~~Lr~~V~D~d---~d~iG~~~ipl~~L~~G~---r~v~L~~~~g~~~-~~~~Lfv~i~~~ 798 (799)
T 2zkm_X 727 PVWKEEPFVFEKILMPELASLRVAVMEEG---NKFLGHRIIPINALNSGY---HHLCLHSESNMPL-TMPALFIFLEMK 798 (799)
T ss_dssp CBCCCCCEEEEEESSGGGCEEEEEEEETT---TEEEEEEEEEGGGBCCEE---EEEEEECTTCCEE-EEEEEEEEEEEE
T ss_pred CeeecceEEEEEEccCCccEEEEEEEEeC---CCccceEeeehhhcCCCc---EEEeccCCCCCCC-CceEEEEEEEEE
Confidence 99999 6999 77543 368999999987 799999999999998763 6899998888765 346777777764
No 54
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.30 E-value=4.9e-12 Score=142.38 Aligned_cols=106 Identities=26% Similarity=0.425 Sum_probs=90.0
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEEC----CEEEeeeeeeeCCCCC
Q 009008 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSIC----GAVIGRTFVISNSESP 113 (546)
Q Consensus 38 ~~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~----~~~~~rT~vi~~t~nP 113 (546)
+..+.|.|+|++|++|+.+|. .|++||||++.+. .....+|+++++++||
T Consensus 169 ~~~~~L~V~v~~a~~L~~~d~--------------------------~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP 222 (674)
T 3pfq_A 169 IDREVLIVVVRDAKNLVPMDP--------------------------NGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNP 222 (674)
T ss_dssp ECSSEEEEEEEEEESCCCCST--------------------------TSSCCEEEEEEEESCSSCCSCEECCCCSSCSSC
T ss_pred eccceeeeeeecccccCCCCc--------------------------ccccCcccccccccCccccccccccccccccCC
Confidence 457899999999999999886 5679999999992 2233499999999999
Q ss_pred eEeeEEEEeecCC--CceEEEEEEecCCcC-CeeeEeEEEeceeccCCCeeeeccccccC
Q 009008 114 VWMQHFNVPVAHS--AAEVHFVVKDNDFVG-SQIMGAVGIPVEKLCSGDKIEGAFPILNS 170 (546)
Q Consensus 114 ~WNE~F~~~v~~~--~~~l~~~V~D~d~~~-~d~IG~~~i~l~~l~~g~~~~~W~~L~~~ 170 (546)
+|||+|.|.+... ...|.|+|||+|.++ +++||++.++++++..+. .++|++|+..
T Consensus 223 ~wne~f~f~~~~~~~~~~L~v~v~d~d~~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~ 281 (674)
T 3pfq_A 223 EWNETFRFQLKESDKDRRLSVEIWDWDLTSRNDFMGSLSFGISELQKAG-VDGWFKLLSQ 281 (674)
T ss_dssp EEEEEEEEECCSTTTTCEEEEEEEECCSSSCCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred CccceeeeecccCCccceeeeEEeecccccccccccccccchhhhccCC-cccceeeccc
Confidence 9999999997643 467999999999987 899999999999998654 5899999864
No 55
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.29 E-value=8e-12 Score=142.47 Aligned_cols=111 Identities=23% Similarity=0.301 Sum_probs=89.8
Q ss_pred eEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEECC-----EEEeeeeeeeC-CCCCe
Q 009008 41 GNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSICG-----AVIGRTFVISN-SESPV 114 (546)
Q Consensus 41 g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l~~-----~~~~rT~vi~~-t~nP~ 114 (546)
.+|.|+|++|++|+.. .+||||+|.+.+ ....||+++++ +.||+
T Consensus 725 ~~L~V~Visaq~L~~~------------------------------~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPv 774 (885)
T 3ohm_B 725 NALRVKVISGQFLSDR------------------------------KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPV 774 (885)
T ss_dssp EEEEEEEEEEESCCSS------------------------------CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCB
T ss_pred eEEEEEEEEeccCccc------------------------------CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCe
Confidence 5799999999999842 279999999964 22349999976 69999
Q ss_pred Eee-EEEEe-ecCC-CceEEEEEEecCCcCCeeeEeEEEeceeccCCCeeeeccccccCCCCcccCCceEEEEEEee
Q 009008 115 WMQ-HFNVP-VAHS-AAEVHFVVKDNDFVGSQIMGAVGIPVEKLCSGDKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (546)
Q Consensus 115 WNE-~F~~~-v~~~-~~~l~~~V~D~d~~~~d~IG~~~i~l~~l~~g~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~ 188 (546)
||| +|.|. +..+ ...|+|+|+|+| +++||++.|||+.|..|. ++++|.+..|.+. ..+.|.+.+.+.
T Consensus 775 WnEe~F~F~~V~~pela~Lrf~V~D~d---ddfiG~~~lpL~~L~~Gy---R~vpL~~~~g~~l-~~atLfv~i~~~ 844 (885)
T 3ohm_B 775 WDEEPFDFPKVVLPTLASLRIAAFEEG---GKFVGHRILPVSAIRSGY---HYVCLRNEANQPL-CLPALLIYTEAS 844 (885)
T ss_dssp CCCCCEEEEEESCGGGCEEEEEEEETT---TEEEEEEEEETTTCCCEE---EEEEEECTTSCEE-EEEEEEEEEEEE
T ss_pred eccceeEEeeEEcCCcCEEEEEEEcCC---ccEEeeEEEEHHHcCCCc---eEEEecCCCCCcc-CceEEEEEEEEE
Confidence 999 69998 6433 368999999987 799999999999998774 5799999888764 346777777774
No 56
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=99.25 E-value=4.8e-12 Score=140.31 Aligned_cols=142 Identities=13% Similarity=0.088 Sum_probs=95.3
Q ss_pred hHHHHHHHHHhccc-----eEEEEEEeecceeeEEeCCCCchHHHHHHHhhhcCCCeEEEEEecCCccccccCCcccCcc
Q 009008 251 CWQDVYDAINQARR-----LIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIM 325 (546)
Q Consensus 251 ~f~~l~~aI~~Ak~-----~I~I~~w~~~~~~~l~~~~~~~~~l~~~L~~ka~rGV~VriLvwD~~~s~~~~~~~~~~~~ 325 (546)
.|+.++++|++|++ +|.++.| ++.++ ..|.++|++||++||+|++|+ | .++...
T Consensus 353 sf~~vi~~I~~A~~DP~V~sIk~tlY-------r~~~d---s~Iv~ALi~AA~rGv~V~vLv-e-l~arfd--------- 411 (705)
T 2o8r_A 353 TYDYVVRLLMEAAISPDVSEIRLTQY-------RVAEN---SSIISALEAAAQSGKKVSVFV-E-LKARFD--------- 411 (705)
T ss_dssp CSHHHHHHHHHHHTCTTEEEEEEEES-------CCCSC---CHHHHHHHHHHHTTCEEEEEE-C-CCSCC----------
T ss_pred hHHHHHHHHHHhccCCCceEEEEEEE-------EEcCC---HHHHHHHHHHHHCCCEEEEEE-e-CCCCcc---------
Confidence 69999999999998 9999999 44433 799999999999999999997 8 554321
Q ss_pred CCCcHHHHHhhcCCCcEEEEccCCCCCCccceeccccccccccccceEEEccCcccccceEEEEEccccccCcccCCCCC
Q 009008 326 STNDEETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLCKGRYDTPAH 405 (546)
Q Consensus 326 ~~~~~~~~~~l~~~gv~v~~~p~~~~~~~~~~~~~~~~~~~~~HqK~vVID~~~~~~~~~~vAfvGG~nl~~~r~d~~~H 405 (546)
...+....+.|+++||+|...- .++++|+|++|||+.. .++ ||+ .||- |
T Consensus 412 ee~ni~wa~~Le~aGv~Vv~g~----------------~~lk~H~Ki~lIdrr~------~~~--g~~----~~y~---~ 460 (705)
T 2o8r_A 412 EENNLRLSERMRRSGIRIVYSM----------------PGLKVHAKTALILYHT------PAG--ERP----QGIA---L 460 (705)
T ss_dssp ---CHHHHHHHHHHTCEEEECC----------------TTCCBCCCEEEEEECC------CSS--SCC----CEEE---E
T ss_pred hhhhHHHHHHHHHCCCEEEEcc----------------CCCCceeEEEEEeccc------ccC--Cce----eEEE---e
Confidence 0123567788999999987531 2468999999999820 033 554 1221 0
Q ss_pred CcccccccccCCCCCCCCCCCCCCCCCCCCeeeccccccC-hHHHHHHHHHHHHHhh
Q 009008 406 PLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDG-PAAYDILTNFEERWLK 461 (546)
Q Consensus 406 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~pWhD~~~~i~G-paa~dl~~~F~~rW~~ 461 (546)
..+ ..| + .....-|.|+++...+ +++.|+...|...|..
T Consensus 461 igt--------GN~-n--------~~tariy~D~~l~t~~~~i~~dl~~vF~~~tg~ 500 (705)
T 2o8r_A 461 LST--------GNF-N--------ETTARIYSDTTLMTANTDIVHDVYRLFRILDGD 500 (705)
T ss_dssp EES--------SCS-S--------CCCSSCEEEEEEEECCHHHHHHHHHHHHHHTTC
T ss_pred ccc--------cce-e--------eeEEEEEeeeeeeecChHHHHHHHHHHHHHhCC
Confidence 000 000 0 0011235566655555 5789999999888864
No 57
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=99.07 E-value=1.9e-09 Score=93.45 Aligned_cols=90 Identities=19% Similarity=0.285 Sum_probs=75.1
Q ss_pred CCCcEEEEEECCEEEe---ee-eeeeCCCCCeEeeEEEEeecCCCceEEEEEEecCCcCCeeeEeEEEeceecc-----C
Q 009008 87 TSDPYVTVSICGAVIG---RT-FVISNSESPVWMQHFNVPVAHSAAEVHFVVKDNDFVGSQIMGAVGIPVEKLC-----S 157 (546)
Q Consensus 87 ~~DPYv~v~l~~~~~~---rT-~vi~~t~nP~WNE~F~~~v~~~~~~l~~~V~D~d~~~~d~IG~~~i~l~~l~-----~ 157 (546)
..||||.|.++....+ +| ...++|..|+|||+|.-.+. ..+.|.|.|++... ++++.+.|++++|. .
T Consensus 26 ~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~---~fvAn~tV~~edL~~~c~~~ 101 (126)
T 1yrk_A 26 ANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIY-EGRVIQIVLMRAAE---EPVSEVTVGVSVLAERCKKN 101 (126)
T ss_dssp SCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECC-TTCEEEEEEEEETT---EEEEEEEEEHHHHHHHHHTT
T ss_pred cCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeee-CCEEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccC
Confidence 4799999999987765 87 55666999999999998876 56899999997655 99999999999999 4
Q ss_pred CCeeeeccccccCCCCcccCCceEEEEEEee
Q 009008 158 GDKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (546)
Q Consensus 158 g~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~ 188 (546)
+...+.|++|. +.|++++.++|.
T Consensus 102 ~g~~e~WvdLe--------P~Gkl~~~i~~~ 124 (126)
T 1yrk_A 102 NGKAEFWLDLQ--------PQAKVLMSVQYF 124 (126)
T ss_dssp TTEEEEEEECB--------SSCEEEEEEEEE
T ss_pred CCceEEEEecc--------cCcEEEEEEEEe
Confidence 56789999994 236888888874
No 58
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=99.06 E-value=1.6e-09 Score=95.19 Aligned_cols=90 Identities=16% Similarity=0.311 Sum_probs=76.3
Q ss_pred CCCcEEEEEECCEEE---eee-eeeeCCCCCeEeeEEEEeecCCCceEEEEEEecCCcCCeeeEeEEEeceecc-----C
Q 009008 87 TSDPYVTVSICGAVI---GRT-FVISNSESPVWMQHFNVPVAHSAAEVHFVVKDNDFVGSQIMGAVGIPVEKLC-----S 157 (546)
Q Consensus 87 ~~DPYv~v~l~~~~~---~rT-~vi~~t~nP~WNE~F~~~v~~~~~~l~~~V~D~d~~~~d~IG~~~i~l~~l~-----~ 157 (546)
..||||.|.++.... ++| ...++|..|+|||+|.-.+. ..+.|.|.|++... ++++.+.|++++|. .
T Consensus 31 ~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~-~Gr~l~i~Vfh~a~---~fVAn~tV~~edL~~~ck~~ 106 (138)
T 2enj_A 31 AVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHIN-KGRVMQIIVKGKNV---DLISETTVELYSLAERCRKN 106 (138)
T ss_dssp CCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCC-SSCEEEEEEECSSC---SCCEEEEEESHHHHHHHHHT
T ss_pred cCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEE-CCeEEEEEEEcCCC---CeeeEEEEEHHHHHhhhccC
Confidence 479999999998777 899 66777999999999998876 56899999997554 99999999999999 4
Q ss_pred CCeeeeccccccCCCCcccCCceEEEEEEee
Q 009008 158 GDKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (546)
Q Consensus 158 g~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~ 188 (546)
+...+.|++|. +.|++++.++|.
T Consensus 107 ~g~~e~WvdLe--------P~Gkl~v~i~~~ 129 (138)
T 2enj_A 107 NGKTEIWLELK--------PQGRMLMNARYF 129 (138)
T ss_dssp TTCEEEEEECB--------SSCEEEEEEEEC
T ss_pred CCceEEEEecc--------cCcEEEEEEEEE
Confidence 56779999994 236899999884
No 59
>3hsi_A Phosphatidylserine synthase; CDP- diacylglycerol--serine O-phosphatidyltransferase, structura genomics, PSI-2; HET: MSE; 2.20A {Haemophilus influenzae}
Probab=98.92 E-value=2.1e-09 Score=115.23 Aligned_cols=148 Identities=16% Similarity=0.020 Sum_probs=98.5
Q ss_pred hhHHHHHHHHHhccceEEEEEEeecceeeEEeCCCCchHHHHHHHhhhcCCCeEEEEEecCCccccccCCcccCccCCCc
Q 009008 250 SCWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMSTND 329 (546)
Q Consensus 250 ~~f~~l~~aI~~Ak~~I~I~~w~~~~~~~l~~~~~~~~~l~~~L~~ka~rGV~VriLvwD~~~s~~~~~~~~~~~~~~~~ 329 (546)
.....+.++|.+|+++|+|+..- ++.+ ..+.++|+.|++|||+|+||+ +...+................
T Consensus 258 ~i~~~~~~lI~~A~~~I~I~tpY------f~p~----~~~~~aL~~Aa~rGV~VrIi~-~~~~and~y~~~~~~~~~~~~ 326 (458)
T 3hsi_A 258 ELNQVIEDLFLQVQKKLVICTPY------FNFP----RTLQHKIATLLENGKRVEIIV-GDKVANDFYIPPEQPFKMAGA 326 (458)
T ss_dssp HHHHHHHHHHHTCSSEEEEECSS------SCCC----HHHHHHHHHHHTTTCEEEEEE-ECGGGSTTCCCTTSCCCGGGG
T ss_pred HHHHHHHHHHHhcccEEEEEEec------cCCC----HHHHHHHHHHHHCCCeEEEEE-CCccccCCccCCcchhhhhcc
Confidence 36889999999999999999532 3333 789999999999999999997 766432210000000000011
Q ss_pred -HHHH-----------HhhcCCC-cEEEEccCCCCCCccceeccccccccccccceEEEccCcccccceEEEEEcccccc
Q 009008 330 -EETR-----------RFFKHSS-VQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLC 396 (546)
Q Consensus 330 -~~~~-----------~~l~~~g-v~v~~~p~~~~~~~~~~~~~~~~~~~~~HqK~vVID~~~~~~~~~~vAfvGG~nl~ 396 (546)
+... ..+.++| +.+..+... .+..|.|++|||+ .+++||+.|++
T Consensus 327 ~~~lye~~~~~f~~~~~~l~~~G~i~V~i~~~~---------------~~~lHaK~~vvD~--------~~~~vGS~N~d 383 (458)
T 3hsi_A 327 LPYLYESNLRRFCEKFETQIESGQLVVRLWRDG---------------DNTYHLKGVWVDD--------RYILLTGNNLN 383 (458)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHTSEEEEEECBT---------------TBEECCCEEEETT--------TEEEEECCCCS
T ss_pred hHHHHHHhhhhhHHHHHHHHhCCCeEEEEEecC---------------CCceeEEEEEECC--------eEEEecCCCCC
Confidence 1111 1234456 444433111 1357999999999 69999999998
Q ss_pred CcccCCCCCCcccccccccCCCCCCCCCCCCCCCCCCCCeeeccccccCh---HHHHHHHHHHHHHhhccC
Q 009008 397 KGRYDTPAHPLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGP---AAYDILTNFEERWLKASK 464 (546)
Q Consensus 397 ~~r~d~~~H~~~~~~~~~~~~d~~~~~~~~~~~~~~~~pWhD~~~~i~Gp---aa~dl~~~F~~rW~~~~~ 464 (546)
..-+.- =..+.+.|.+| .+.++.+.|.+.|..+..
T Consensus 384 ~RS~~l---------------------------------N~E~~~~i~~~~~~l~~~l~~~f~~~~~~s~~ 421 (458)
T 3hsi_A 384 PRAWRL---------------------------------DAENGLLIYDPQQQLLAQVEKEQNQIRQHTKV 421 (458)
T ss_dssp HHHHHT---------------------------------CEEEEEEEECTTCSSHHHHHHHHHHHHTTEEE
T ss_pred cchhhh---------------------------------CceeEEEEeCCcHHHHHHHHHHHHHHHHhCeE
Confidence 643310 03678888888 799999999999987644
No 60
>1v0w_A Phospholipase D; hydrolase, substrate SOAK, dibutyrylphosphatidylcholine, DIC4PC; 1.35A {Streptomyces SP} SCOP: d.136.1.2 d.136.1.2 PDB: 1v0s_A 1v0r_A 1v0t_A 1v0v_A 1v0u_A 1v0y_A* 1f0i_A 2ze4_A* 2ze9_A*
Probab=98.66 E-value=1.6e-08 Score=109.98 Aligned_cols=160 Identities=21% Similarity=0.259 Sum_probs=92.2
Q ss_pred hhHHHHHHHHHhccceEEEEEEeecceeeEEeCCCCchHHHHHHHhhhcCCCeEEEEEecCCccccccCCcccCccCCCc
Q 009008 250 SCWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMSTND 329 (546)
Q Consensus 250 ~~f~~l~~aI~~Ak~~I~I~~w~~~~~~~l~~~~~~~~~l~~~L~~ka~rGV~VriLvwD~~~s~~~~~~~~~~~~~~~~ 329 (546)
.....+.++|.+|+++|||+.-.|+| |+++.......|.++|+.|++|||+|+||+ +...............+..-
T Consensus 314 ~~~~~~~~~I~~A~~~I~I~tq~~~p--yf~p~~~~~~~i~~aL~~Aa~rGV~VrIl~-~~~~~~~~~~~a~~~~~~~L- 389 (506)
T 1v0w_A 314 PEESALRALVASAKGHIEISQQDLNA--TCPPLPRYDIRLYDALAAKMAAGVKVRIVV-SDPANRGAVGSGGYSQIKSL- 389 (506)
T ss_dssp HHHHHHHHHHHTCSSEEEEEESCSSC--CTTTSCSCCHHHHHHHHHHHHTTCEEEEEE-CCGGGCC------CCCCSCT-
T ss_pred cHHHHHHHHHhCcCcEEEEEeccccc--cccCcccchHHHHHHHHHHHhCCCcEEEEe-CCCCchHHHHHhHHHHHHHH-
Confidence 36889999999999999999632221 122211123799999999999999999997 55421110000000000000
Q ss_pred HH------HHHhhcCC-----------CcEEEEccCCCCCCccceeccccccccccccceEEEccCcccccceEEEEEcc
Q 009008 330 EE------TRRFFKHS-----------SVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGG 392 (546)
Q Consensus 330 ~~------~~~~l~~~-----------gv~v~~~p~~~~~~~~~~~~~~~~~~~~~HqK~vVID~~~~~~~~~~vAfvGG 392 (546)
.+ ....+.++ ++++..+... + ...+ ..+.....|.|++|||+ .+++||+
T Consensus 390 ~~~~~~l~~gv~ll~~g~~e~~~~~~~~l~i~~~~~~-~-~~~~----~~~~~~~lHaK~~vvD~--------~~~~vGS 455 (506)
T 1v0w_A 390 SEISDTLRNRLANITGGQQAAKTAMCSNLQLATFRSS-P-NGKW----ADGHPYAQHHKLVSVDS--------STFYIGS 455 (506)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHHHHEEEEECCSS-S-SSSC----TTSCCCCBCCEEEEETT--------TEEEEES
T ss_pred HHhhhhhcccchhcccccchhccccccceeeeecccc-C-cccc----ccCccccceEEEEEECC--------cEEEEeC
Confidence 00 00001011 1243212100 0 0000 00012368999999999 6999999
Q ss_pred ccccCcccCCCCCCcccccccccCCCCCCCCCCCCCCCCCCCCeeeccccccCh-HHHHHHHHHHHH-Hhhcc
Q 009008 393 LDLCKGRYDTPAHPLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGP-AAYDILTNFEER-WLKAS 463 (546)
Q Consensus 393 ~nl~~~r~d~~~H~~~~~~~~~~~~d~~~~~~~~~~~~~~~~pWhD~~~~i~Gp-aa~dl~~~F~~r-W~~~~ 463 (546)
.|+.. |. ++++.+.|++| .|.++...|.+. |+...
T Consensus 456 ~N~d~-rS-----------------------------------~~E~~l~i~~~~~a~~l~~~f~~~~w~~s~ 492 (506)
T 1v0w_A 456 KNLYP-SW-----------------------------------LQDFGYIVESPEAAKQLDAKLLDPQWKYSQ 492 (506)
T ss_dssp CCSSC-CC-----------------------------------SBCEEEEEECHHHHHHHHHHTHHHHHHHHG
T ss_pred CCCCC-cc-----------------------------------hhhceeEecCHHHHHHHHHHHHHHHHhhcc
Confidence 99954 31 13778889987 589999999986 77543
No 61
>1xdp_A Polyphosphate kinase; PPK, PPK complex with AMPPNP, AMPPNP, transferase; HET: ATP; 2.50A {Escherichia coli} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4 PDB: 1xdo_A*
Probab=97.36 E-value=0.00042 Score=77.32 Aligned_cols=132 Identities=17% Similarity=0.171 Sum_probs=84.1
Q ss_pred HHHHHHHHHhccc----eEEEEEEeecceeeEEeCCCCchHHHHHHHhhhcCCCeEEEEEecCCccccccCCcccCccCC
Q 009008 252 WQDVYDAINQARR----LIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMST 327 (546)
Q Consensus 252 f~~l~~aI~~Ak~----~I~I~~w~~~~~~~l~~~~~~~~~l~~~L~~ka~rGV~VriLvwD~~~s~~~~~~~~~~~~~~ 327 (546)
.+.+...|+.|++ +|+|.... +.+ ..+.++|.+||++||+|+||| ++.-+. .+| +-.
T Consensus 514 ~~~I~~ei~~A~~g~~~~I~i~~~~-------lpD----~~ii~AL~~Aa~rGV~VrLiv-rg~c~l-~pg-----vp~- 574 (687)
T 1xdp_A 514 YEMVDREIANAQQGLPSGITLKLNN-------LVD----KGLVDRLYAASSSGVPVNLLV-RGMCSL-IPN-----LEG- 574 (687)
T ss_dssp HHHHHHHHHHHHTTCCCCEEEEESC-------BCC----HHHHHHHHHHHHTTCCEEEEE-SSCBCB-CTT-----CTT-
T ss_pred HHHHHHHHHHHHcCCCCEEEEEeCC-------CCC----HHHHHHHHHHHHCCCEEEEEE-eccccc-CCC-----CCC-
Confidence 3445555667886 89998762 223 799999999999999999998 543221 111 000
Q ss_pred CcHHHHHhhcCCCcEEEEccCCCCCCccceeccccccccccccceEEEccCcccccceEEEEEccccccCcccCCCCCCc
Q 009008 328 NDEETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDLCKGRYDTPAHPL 407 (546)
Q Consensus 328 ~~~~~~~~l~~~gv~v~~~p~~~~~~~~~~~~~~~~~~~~~HqK~vVID~~~~~~~~~~vAfvGG~nl~~~r~d~~~H~~ 407 (546)
...++.|.-+- +- +-.|-|+....+. ....+|+|+.|+...-++.
T Consensus 575 ---------~sdni~V~s~~---------------~r-~Leh~rI~~f~~~-----dd~~~~IGSAN~d~Rsl~~----- 619 (687)
T 1xdp_A 575 ---------ISDNIRAISIV---------------DR-YLEHDRVYIFENG-----GDKKVYLSSADWMTRNIDY----- 619 (687)
T ss_dssp ---------TSTTEEEEEEC---------------SS-SEECCCEEEECGG-----GSCEEEEESCCBSHHHHHS-----
T ss_pred ---------CCCCEEEEEeh---------------hH-HhhCCeEEEEcCC-----CCCEEEEEcCccchhhhhh-----
Confidence 01233443210 00 1236699998431 1169999999998744431
Q ss_pred ccccccccCCCCCCCCCCCCCCCCCCCCeeeccccccCh-HHHHHHHHHHHHHhhccCC
Q 009008 408 FKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGP-AAYDILTNFEERWLKASKP 465 (546)
Q Consensus 408 ~~~~~~~~~~d~~~~~~~~~~~~~~~~pWhD~~~~i~Gp-aa~dl~~~F~~rW~~~~~~ 465 (546)
=..+.+.|..| .+.+|.+.|...|....+.
T Consensus 620 ----------------------------n~Ev~~~I~d~~~~~~l~~~f~~~l~d~~~a 650 (687)
T 1xdp_A 620 ----------------------------RIEVATPLLDPRLKQRVLDIIDILFSDTVKA 650 (687)
T ss_dssp ----------------------------EEEEEEECCSHHHHHHHHHHHHHHHTCCSSE
T ss_pred ----------------------------heeeeEEecCHHHHHHHHHHHHHhhcccccc
Confidence 13667778776 5888999999999976553
No 62
>2o8r_A Polyphosphate kinase; structural genomics, protein structure initiative, PSI, nysgrc, NEW YORK structural genomics research consortium; HET: MSE; 2.70A {Porphyromonas gingivalis} SCOP: a.7.15.1 d.322.1.2 d.136.1.4 d.136.1.4
Probab=97.28 E-value=0.00047 Score=76.65 Aligned_cols=143 Identities=15% Similarity=0.136 Sum_probs=95.9
Q ss_pred ecCCccccchhhHHHHHHHHHhccc----eEEEEEEeecceeeEEeCCCCchHHHHHHHhhhcCCCeEEEEEecCCcccc
Q 009008 240 LDGGVQFNHESCWQDVYDAINQARR----LIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWDDPTSRS 315 (546)
Q Consensus 240 l~~g~~y~~~~~f~~l~~aI~~Ak~----~I~I~~w~~~~~~~l~~~~~~~~~l~~~L~~ka~rGV~VriLvwD~~~s~~ 315 (546)
|.-|+....+.+.+.+..+|..|++ +|+|.+-. | .| ..+.++|.+|+++||+|+||| .+.-+..
T Consensus 509 l~~sP~~~~~~i~~~i~~eI~~Ak~G~~a~I~ik~n~------l-~D----~~ii~aL~~As~~GV~V~LIV-RGiC~L~ 576 (705)
T 2o8r_A 509 LLVARYNMGEAITNLIEREIENVKRGKRGYMLLKMNG------L-QD----KNVITQLYRASEAGVEIDLIV-RGICCLV 576 (705)
T ss_dssp CEETTTTHHHHHHHHHHHHHHHHHTTCCCEEEEEESC------B-CC----HHHHHHHHHHHHTTCEEEEEE-SSCBCSC
T ss_pred EEECCchHHHHHHHHHHHHHHHHhcCCCCEEEEEcCC------C-CC----HHHHHHHHHHHHCCCeEEEEE-ccccccC
Confidence 3336666667778889999999998 99998631 2 23 799999999999999999998 5443211
Q ss_pred ccCCcccCccCCCcHHHHHhhcCCCcEEEEccCCCCCCccceeccccccccccccceEEEccCcccccceEEEEEccccc
Q 009008 316 ILGYKTDGIMSTNDEETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTIYTHHQKTVVVDADAGQFKRKIIAFVGGLDL 395 (546)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~p~~~~~~~~~~~~~~~~~~~~~HqK~vVID~~~~~~~~~~vAfvGG~nl 395 (546)
++ + . ...++.|.-+- + -+-.|-|+.+..+. ....+|+|+.|+
T Consensus 577 -Pg-----v---------~--~sdni~V~Siv---------------g-r~Leh~RIy~f~~g-----d~~~~~IGSAn~ 618 (705)
T 2o8r_A 577 -PD-----M---------P--QSRNIRVTRLV---------------D-MYLEHSRIWCFHNG-----GKEEVFISSADW 618 (705)
T ss_dssp -CS-----S---------G--GGTTEEEEECC---------------S-SSEECCCEEEECGG-----GSCEEEEESCCB
T ss_pred -CC-----C---------C--CCCCeEEEeeH---------------H-HHHhcCEEEEEECC-----CCcEEEEecccc
Confidence 11 0 0 11234443210 0 01246699998321 116999999999
Q ss_pred cCcccCCCCCCcccccccccCCCCCCCCCCCCCCCCCCCCeeeccccccCh-HHHHHHHHHHHHHhhccCC
Q 009008 396 CKGRYDTPAHPLFKTLETVHKDDYYNPSLLEPIAGGPREPWHDLHCRIDGP-AAYDILTNFEERWLKASKP 465 (546)
Q Consensus 396 ~~~r~d~~~H~~~~~~~~~~~~d~~~~~~~~~~~~~~~~pWhD~~~~i~Gp-aa~dl~~~F~~rW~~~~~~ 465 (546)
...-++- =..+.+.|..| .+..|.+.|...|....+.
T Consensus 619 m~Rnl~~---------------------------------r~Ev~~~i~d~~~~~~l~~i~~~~l~d~~~a 656 (705)
T 2o8r_A 619 MKRNLYN---------------------------------RIETACPVLDPTLRREIIDILEIQLRDNIKA 656 (705)
T ss_dssp CHHHHHT---------------------------------SBCEEEECCSHHHHHHHHHHHHHHHHCCSSC
T ss_pred chhhhhh---------------------------------eeEEEEEEcCHHHHHHHHHHHHHhhhhhhce
Confidence 8744431 03567778887 5888999999999977664
No 63
>3qph_A TRMB, A global transcription regulator; transcriptional regulator; HET: SUC; 2.99A {Pyrococcus furiosus}
Probab=95.44 E-value=0.015 Score=59.60 Aligned_cols=46 Identities=13% Similarity=0.062 Sum_probs=39.3
Q ss_pred hHHHHHHHHHhccceEEEEEEeecceeeEEeCCCCchHHHHHHHhhhcCCCeEEEEE
Q 009008 251 CWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILA 307 (546)
Q Consensus 251 ~f~~l~~aI~~Ak~~I~I~~w~~~~~~~l~~~~~~~~~l~~~L~~ka~rGV~VriLv 307 (546)
..+.+.+.|.+|+++|++..|.- .-..+.+.|.++++|||+|++++
T Consensus 120 I~~ri~eli~~A~~eI~i~~~~~-----------~l~~l~~~L~~a~~RGV~Vrvi~ 165 (342)
T 3qph_A 120 AIEMFRESLYSAKNEVIVVTPSE-----------FFETIREDLIKTLERGVTVSLYI 165 (342)
T ss_dssp HHHHHHHHHHHCSSEEEEEECHH-----------HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhhheEEEEEeCHH-----------HHHHHHHHHHHHHhCCCEEEEEE
Confidence 68899999999999999997621 12677889999999999999997
No 64
>2f5t_X Archaeal transcriptional regulator TRMB; sugar-binding; HET: MAL; 1.45A {Thermococcus litoralis} SCOP: b.38.5.1 d.136.1.5
Probab=94.88 E-value=0.033 Score=53.85 Aligned_cols=48 Identities=13% Similarity=0.041 Sum_probs=41.5
Q ss_pred hHHHHHHHHHhccceEEEEEEeecceeeEEeCCCCchHHHHHHHhhhcCCCeEEEEEec
Q 009008 251 CWQDVYDAINQARRLIYITGWSVYHTVRLVRDGSNTLMLGDLLKIKSQEGVRVLILAWD 309 (546)
Q Consensus 251 ~f~~l~~aI~~Ak~~I~I~~w~~~~~~~l~~~~~~~~~l~~~L~~ka~rGV~VriLvwD 309 (546)
..+.+.+.|++|+++|++..|. ..-..|.+.|++|++|||.|+|+++.
T Consensus 11 Ii~r~~e~I~~A~~el~lsi~~-----------e~l~~l~~~L~~A~~rGV~V~liv~~ 58 (233)
T 2f5t_X 11 AIEMFRESLYSAKNEVIVVTPS-----------EFFETIREDLIKTLERGVTVSLYIDK 58 (233)
T ss_dssp HHHHHHHHHHTCSSEEEEEECG-----------GGHHHHHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHHhhhEEEEEeCH-----------HHHHHHHHHHHHHHHCCCEEEEEEcC
Confidence 6889999999999999998771 22378999999999999999999954
No 65
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=89.75 E-value=1.4 Score=50.75 Aligned_cols=88 Identities=11% Similarity=0.141 Sum_probs=59.0
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEE--CCEEEe---eeeeeeCCCC
Q 009008 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSI--CGAVIG---RTFVISNSES 112 (546)
Q Consensus 38 ~~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l--~~~~~~---rT~vi~~t~n 112 (546)
-....|.|+|..+.++...+ .++-||++.+ |++... .|+.+.-..+
T Consensus 214 ~~~~~f~i~i~~~~~~~~~~-----------------------------~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~ 264 (940)
T 2wxf_A 214 SLEQPFSIELIEGRKVNADE-----------------------------RMKLVVQAGLFHGNEMLCKTVSSSEVNVCSE 264 (940)
T ss_dssp TCCSEEEEEEEEEECCCC--------------------------------CEEEEEEEEEETTEESSCCEECCCEESCSS
T ss_pred hcCCceEEEEEEecccCCCC-----------------------------CceEEEEEEEEECCEEccCceecccccCCCC
Confidence 35677999999999986332 1567888777 555443 4555555788
Q ss_pred CeEeeEEEEee--cC--CCceEEEEEEecCCc--C-----------CeeeEeEEEecee
Q 009008 113 PVWMQHFNVPV--AH--SAAEVHFVVKDNDFV--G-----------SQIMGAVGIPVEK 154 (546)
Q Consensus 113 P~WNE~F~~~v--~~--~~~~l~~~V~D~d~~--~-----------~d~IG~~~i~l~~ 154 (546)
|.|||-+.|++ .+ ....|.|+||+.... + ...||.+.++|=+
T Consensus 265 ~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lFd 323 (940)
T 2wxf_A 265 PVWKQRLEFDISVCDLPRMARLCFALYAVVEKAKKARSTKKKSKKADCPIAWANLMLFD 323 (940)
T ss_dssp CEEEEEEEEEEEGGGCCTTCEEEEEEEEEC----------------CEEEEEEEEESBC
T ss_pred cccceEEEcccccccCCcccEEEEEEEEecCCccCccccccccccccceEEEEeeeEEC
Confidence 99999766664 33 357899999985321 1 3488998888743
No 66
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=83.99 E-value=3.3 Score=37.08 Aligned_cols=99 Identities=9% Similarity=0.092 Sum_probs=65.8
Q ss_pred CCc--EEEEEECCEEEeeeeeeeCCCCCeEeeEEEEeecCC--------CceEEEEEEecCCcCCeeeEeEEEeceeccC
Q 009008 88 SDP--YVTVSICGAVIGRTFVISNSESPVWMQHFNVPVAHS--------AAEVHFVVKDNDFVGSQIMGAVGIPVEKLCS 157 (546)
Q Consensus 88 ~DP--Yv~v~l~~~~~~rT~vi~~t~nP~WNE~F~~~v~~~--------~~~l~~~V~D~d~~~~d~IG~~~i~l~~l~~ 157 (546)
.+| ||++.+-.-...-|.+.. ..+|.+|-+-.+.+.-. ...+.|++..........||++.|++.++..
T Consensus 40 ~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~lELhqa~g~~~~tla~~~I~l~~lLe 118 (156)
T 2yrb_A 40 KEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITLEVHQAYSTEYETIAACQLKFHEILE 118 (156)
T ss_dssp SCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEEEEEEECSSCEEEEEEEEECCSHHHH
T ss_pred cCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEEEEEEeeCCCceEEEEEEEEhHHhhC
Confidence 356 566666444443666666 88999999766655321 2467777765432224699999999999985
Q ss_pred C-CeeeeccccccCCCCcccCCceEEEEEEee
Q 009008 158 G-DKIEGAFPILNSSRKPCKAGAVLSLSIQYT 188 (546)
Q Consensus 158 g-~~~~~W~~L~~~~g~~~k~~g~I~l~l~f~ 188 (546)
. ..+..-.+|.+..|.. ..-|.+.++++..
T Consensus 119 ~~~~i~g~~~L~g~~g~~-~~~G~LeywiRL~ 149 (156)
T 2yrb_A 119 KSGRIFCTASLIGTKGDI-PNFGTVEYWFRLR 149 (156)
T ss_dssp CCSCEEEEEEECBSSSCC-TTSEEEEEEEEEE
T ss_pred cCCceEEEEEEEcCCCCc-ceEEEEEEEEEEe
Confidence 3 3456667888777632 1347888888875
No 67
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=83.61 E-value=2.9 Score=39.58 Aligned_cols=36 Identities=11% Similarity=0.455 Sum_probs=29.6
Q ss_pred eeeeeeCCCCCeEeeEEEEeecCC---CceEEEEEEecC
Q 009008 103 RTFVISNSESPVWMQHFNVPVAHS---AAEVHFVVKDND 138 (546)
Q Consensus 103 rT~vi~~t~nP~WNE~F~~~v~~~---~~~l~~~V~D~d 138 (546)
+|-|...+.+|.|+|++.+.++.. ...|.|+++...
T Consensus 80 ~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S 118 (220)
T 3l4c_A 80 KSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRS 118 (220)
T ss_dssp ECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECC
T ss_pred EEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEec
Confidence 888888899999999999988644 378999997643
No 68
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=82.13 E-value=4.1 Score=47.43 Aligned_cols=88 Identities=16% Similarity=0.131 Sum_probs=57.7
Q ss_pred eceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEE--CCEEEe---eeeeeeCCCCC
Q 009008 39 LHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSI--CGAVIG---RTFVISNSESP 113 (546)
Q Consensus 39 ~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l--~~~~~~---rT~vi~~t~nP 113 (546)
+...+.|+|..+.++.... +...+-||++.+ |++... +|+.+ ...+|
T Consensus 353 ~~~~f~v~i~~~~~~n~~~---------------------------~~~~~~~V~~~l~hG~~~L~~~~~T~~~-~~~~~ 404 (1091)
T 3hhm_A 353 INSALRIKILCATYVNVNI---------------------------RDIDKIYVRTGIYHGGEPLCDNVNTQRV-PCSNP 404 (1091)
T ss_dssp CCSEEEEEEEEESCCCCCC---------------------------SSCCCCCEEEEEESSSCSSCCEECCCCC-CTTSC
T ss_pred CCCCEEEEEEEecCCCCCc---------------------------cccceEEEEEEEEECCEEccCceecccc-CCCCC
Confidence 5678999999998875322 112567888888 444332 34333 25688
Q ss_pred eEeeEEEEe--ecC--CCceEEEEEEecCCcC-----CeeeEeEEEecee
Q 009008 114 VWMQHFNVP--VAH--SAAEVHFVVKDNDFVG-----SQIMGAVGIPVEK 154 (546)
Q Consensus 114 ~WNE~F~~~--v~~--~~~~l~~~V~D~d~~~-----~d~IG~~~i~l~~ 154 (546)
.|||-+.|+ +.+ ..+.|.|+||+..... ...||.+.++|=+
T Consensus 405 ~Wne~l~f~i~i~dLPr~arL~~tl~~~~~~~~~~~~~~~lg~~n~~lfd 454 (1091)
T 3hhm_A 405 RWNEWLNYDIYIPDLPRAARLCLSICSVKGRKGAKEEHCPLAWGNINLFD 454 (1091)
T ss_dssp EEEEEEEEEEEGGGCCTTCEEEEEECCCCCCC-------CCEEEEEESBC
T ss_pred CCCeeEEecCccccCChhcEEEEEEEEecCccCcccccceeEEeeeeeEc
Confidence 999966665 333 3588999999855421 3489999999844
No 69
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=75.94 E-value=9.7 Score=43.90 Aligned_cols=67 Identities=15% Similarity=0.163 Sum_probs=42.7
Q ss_pred CCcEEEEEE--CCEEEe--eeeeeeCCCCCeEeeEEEEee--cC--CCceEEEEEEecCCc-----------------CC
Q 009008 88 SDPYVTVSI--CGAVIG--RTFVISNSESPVWMQHFNVPV--AH--SAAEVHFVVKDNDFV-----------------GS 142 (546)
Q Consensus 88 ~DPYv~v~l--~~~~~~--rT~vi~~t~nP~WNE~F~~~v--~~--~~~~l~~~V~D~d~~-----------------~~ 142 (546)
++-||++.+ |++... +|+-+.-+.+|.|||-+.|++ .+ ....|.|+||+.... ..
T Consensus 238 ~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (961)
T 1e7u_A 238 LTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGAKPALSGKTSAEMPSPESKGKA 317 (961)
T ss_dssp EEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEEC--------------------
T ss_pred ceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecccCccccccccccccccccccc
Confidence 467888766 665443 444444467899999766653 33 357899999974321 12
Q ss_pred eeeEeEEEecee
Q 009008 143 QIMGAVGIPVEK 154 (546)
Q Consensus 143 d~IG~~~i~l~~ 154 (546)
..||.+.++|=+
T Consensus 318 ~~lg~~n~~lfd 329 (961)
T 1e7u_A 318 QLLYYVNLLLID 329 (961)
T ss_dssp CEEEEEEEESBC
T ss_pred eeEEEEeeeeec
Confidence 378888887743
No 70
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=72.69 E-value=2.6 Score=49.16 Aligned_cols=71 Identities=14% Similarity=0.196 Sum_probs=47.5
Q ss_pred eeceEEEEEEEEeecCCCCCccccccccccccccccccccccccCCCCCCCCcEEEEEE--CCEEEe---eeeeeeCCCC
Q 009008 38 LLHGNLDIWVKEAKNLPNMDMFHKKIGDVFGKLNVKVTSKIESHLSDKITSDPYVTVSI--CGAVIG---RTFVISNSES 112 (546)
Q Consensus 38 ~~~g~L~V~I~~A~~L~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~DPYv~v~l--~~~~~~---rT~vi~~t~n 112 (546)
-....+.|+|..+.++...+ .++-||++.+ |++... .|+.+.-+.+
T Consensus 350 ~~~~~f~i~i~~~~~~~~~~-----------------------------~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~ 400 (1092)
T 2y3a_A 350 DNNNPFQITLVKGNKLNTEE-----------------------------TVKVHVRAGLFHGTELLCKTVVSSEISGKND 400 (1092)
T ss_dssp CCCSEEEEEECCCCCCCCCS-----------------------------SCCCCCBCCEEETTEESSCCCBCCCCCSSSC
T ss_pred hcCCCEEEEEEEeccCCCCC-----------------------------CceEEEEEEEEECCEEccCceecccccCCCC
Confidence 35677999999998885332 1466766555 555443 3444444778
Q ss_pred CeEeeEEEEee--cCC--CceEEEEEEec
Q 009008 113 PVWMQHFNVPV--AHS--AAEVHFVVKDN 137 (546)
Q Consensus 113 P~WNE~F~~~v--~~~--~~~l~~~V~D~ 137 (546)
|.|||-+.|++ .+. ...|.|+||+.
T Consensus 401 ~~Wnewl~f~i~~~dLPr~a~L~~ti~~~ 429 (1092)
T 2y3a_A 401 HIWNEQLEFDINICDLPRMARLCFAVYAV 429 (1092)
T ss_dssp CCCCEEEEEEEESSSCCTTCEEEEECCCC
T ss_pred CccceeEEeCCccccCChhcEEEEEEEEe
Confidence 99999766654 332 57899999885
No 71
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=30.30 E-value=59 Score=26.98 Aligned_cols=46 Identities=17% Similarity=0.404 Sum_probs=33.7
Q ss_pred hHHHHHHHhhhcCCCeEEEEEecCCccccccCCcccCccCCCcHHHHHhhcCCCcEEEEc
Q 009008 287 LMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMSTNDEETRRFFKHSSVQVLLC 346 (546)
Q Consensus 287 ~~l~~~L~~ka~rGV~VriLvwD~~~s~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~ 346 (546)
.-+.+.+..|.++||.|.++ |++.-.- ...++...|+..||.+..-
T Consensus 90 ewikdfieeakergvevfvv-ynnkddd-------------rrkeaqqefrsdgvdvrtv 135 (162)
T 2l82_A 90 EWIKDFIEEAKERGVEVFVV-YNNKDDD-------------RRKEAQQEFRSDGVDVRTV 135 (162)
T ss_dssp HHHHHHHHHHHHTTCEEEEE-EECSCHH-------------HHHHHHHHHCCSSCEEEEE
T ss_pred HHHHHHHHHHHhcCcEEEEE-ecCCCch-------------hHHHHHHHhhhcCceeeec
Confidence 56778888999999999988 7764220 1245677789999988753
No 72
>2bp3_S Platelet glycoprotein IB alpha chain; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens}
Probab=25.36 E-value=29 Score=20.61 Aligned_cols=12 Identities=33% Similarity=0.797 Sum_probs=9.3
Q ss_pred EeeeEEEeecCC
Q 009008 534 ISNIIWWLRAND 545 (546)
Q Consensus 534 ~~~~~~~~~~~~ 545 (546)
-+..++|.|+|.
T Consensus 9 rsslflwvr~ng 20 (26)
T 2bp3_S 9 RSSLFLWVRPNG 20 (26)
T ss_pred hheEEEEEccCC
Confidence 356788999985
No 73
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR TLA SRT MES; 1.9A {Bacillus firmus}
Probab=22.83 E-value=2.2e+02 Score=27.46 Aligned_cols=80 Identities=14% Similarity=0.112 Sum_probs=56.6
Q ss_pred chHHHHHHHhhhcCCCeEEEEEecCCccccccCCcccCccCCCcHHHHHhhcCCCcEEEEccCCCCCCccceeccccccc
Q 009008 286 TLMLGDLLKIKSQEGVRVLILAWDDPTSRSILGYKTDGIMSTNDEETRRFFKHSSVQVLLCPRSAGKGHSFVKKQEVGTI 365 (546)
Q Consensus 286 ~~~l~~~L~~ka~rGV~VriLvwD~~~s~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~p~~~~~~~~~~~~~~~~~~ 365 (546)
+.++-+.+.+..++|++|.+++ -...+.. ..+++..+.+-.-||++....+..
T Consensus 50 gvrfy~~f~~h~~~Ggkv~~Il-GgstsQr-----------lTSKQavEElL~cGvev~IiNrkR--------------- 102 (358)
T 2c1l_A 50 GVRFYETFTEHINQGGRVIAIL-GGSTSQR-----------LSSRQVVEELLNRGVEVHIINRKR--------------- 102 (358)
T ss_dssp TTTTHHHHHHHHHTTCEEEEEE-ECCSSSC-----------CBBHHHHHHHHHTTCEEEEEECSS---------------
T ss_pred ceeecHHHHHHHhcCCcEEEEE-ccccccc-----------ccHHHHHHHHHhcCCceEEeeeee---------------
Confidence 4788899999999999999997 3322211 124677777888899988775331
Q ss_pred cccccceEEEccCcccccceEEEEEccccccCc
Q 009008 366 YTHHQKTVVVDADAGQFKRKIIAFVGGLDLCKG 398 (546)
Q Consensus 366 ~~~HqK~vVID~~~~~~~~~~vAfvGG~nl~~~ 398 (546)
--|-|+...-... ...-.||+-|++..
T Consensus 103 -i~HaK~Yg~~~n~-----g~~LIV~SgNfT~p 129 (358)
T 2c1l_A 103 -ILHAKLYGTSNNL-----GESLVVSSGNFTGP 129 (358)
T ss_dssp -CBCCEEEEEEETT-----EEEEEEESCCBSTT
T ss_pred -ecchhhhcccCCC-----ceEEEEecCCcccc
Confidence 1499998886532 25778999998763
No 74
>2qzq_A Axin interactor, dorsalization associated protein; beta sheet sandwich, coiled coil, signaling protein, lipid binding protein; 1.90A {Danio rerio} PDB: 2qz5_A
Probab=21.88 E-value=2.4e+02 Score=24.84 Aligned_cols=72 Identities=18% Similarity=0.217 Sum_probs=45.8
Q ss_pred CCcEEEEEEC---C---EEEeeeeee--eCCCCCeEeeEEEEeec--C--CCceEEEEEEecCCcC--CeeeEeEEEece
Q 009008 88 SDPYVTVSIC---G---AVIGRTFVI--SNSESPVWMQHFNVPVA--H--SAAEVHFVVKDNDFVG--SQIMGAVGIPVE 153 (546)
Q Consensus 88 ~DPYv~v~l~---~---~~~~rT~vi--~~t~nP~WNE~F~~~v~--~--~~~~l~~~V~D~d~~~--~d~IG~~~i~l~ 153 (546)
.|||++|++- + +..+.|.+. ..+..=.||.++++..+ + ....+.|+++++.... -...+.+.++++
T Consensus 32 ~~P~~tVSV~D~~G~~ve~~QdTpv~~~~~~~yv~f~~~v~lqtple~lp~G~aivfElkH~k~kkkk~S~kCw~f~~~d 111 (152)
T 2qzq_A 32 IDPYITVSVKDLNGIDLNPVQDTPVATRKEDTYIHFSVDVEIQRHLEKLPKGAAIFFEFKHYKPKKRFTSTKCFAFMEMD 111 (152)
T ss_dssp EEEEEEEEEECTTSCBSSCCEECCCCCEECSSEEEEEEEEECSSCGGGSCTTCEEEEEEEEEETTTTEEEEEEEEEEEGG
T ss_pred cCCeEEEEEEcCCCCCccccccCCCcceecCCeEEEeeEEEeeCcHHHCCCCcEEEEEEEEecccceeeeeeeEEEEEhh
Confidence 5999999992 2 222256554 22333456655555422 1 2467889998876544 347888899999
Q ss_pred eccCCC
Q 009008 154 KLCSGD 159 (546)
Q Consensus 154 ~l~~g~ 159 (546)
++..|.
T Consensus 112 ~i~~g~ 117 (152)
T 2qzq_A 112 EIKPGP 117 (152)
T ss_dssp GCCSEE
T ss_pred hcccCc
Confidence 887754
Done!