BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009009
(546 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 218 bits (554), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 179/556 (32%), Positives = 286/556 (51%), Gaps = 67/556 (12%)
Query: 10 KRSHSQTDYADHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLR 69
KR Q + ++ N++R D+ I E VYR LCPI +G +IG+ G+++ +R
Sbjct: 6 KRKQIQRNNSESNRNQKRRISHDK---INRDELVVYRILCPIDVVGGVIGKSGKVINAIR 62
Query: 70 IDTKSKIRIGETVPGSEERVVTVYSA----SDETNAFEDGDKFVSPAQDALFKVHDRVIA 125
+TK+KI++ + + G +RV+T+Y + +E + ++ + AQDAL KV+D ++A
Sbjct: 63 HNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGFTKSENEPLCCAQDALLKVYDAIVA 122
Query: 126 --EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRIL-KDEHLP 182
EE + D +LLVP Q +IGK G+ ++ IR T A ++++ KD P
Sbjct: 123 SDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDP 182
Query: 183 S--CALRSDELVQISGEASVVKKALCQIASRLHD-NP-------SRSQHLLASAI----- 227
S CA+ D +V ISGE VK+AL +++ ++ NP S SQ + A+++
Sbjct: 183 SHVCAMEYDNVVVISGEPESVKQALFAVSAIMYKINPRENIPLDSTSQDVPAASVIVPSD 242
Query: 228 -SNS-------HSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRD-- 277
SNS +S+ ++ A P A + + GY A S P
Sbjct: 243 LSNSVYPQTGFYSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHG 302
Query: 278 ---DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTE-GDD-CLIT 332
S+E +++CP+ NI VIGKGG+ I +IR+ SG+ I+V+ S T+ GDD C+I
Sbjct: 303 FGGSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVII 362
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSII 392
V++ E +D S +EAV+ LQ E I D + +LLV + IGC+IGK GS+I
Sbjct: 363 VTATESPDDMKSMAVEAVLLLQ----EYIN-DEDAENVKMQLLVSSKVIGCVIGKSGSVI 417
Query: 393 TEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGA 452
E+R+ T ANI I + D++V++SG++ +DALIQ++ RLR ++ + +
Sbjct: 418 NEIRKRTNANICIS--------KGKKDDLVEVSGEVSSVRDALIQIVLRLREDVLGDKDS 469
Query: 453 VSTFVPVLPYIPVSENGSDGLNYESRDSKRHGRGPPYGGYGSSDLAAGDSYGSYGSSQLG 512
V+T P P +D ++ S S P + S +A+ + YGS G
Sbjct: 470 VATRKP-----PAR---TDNCSFLSGSSNAGYTLPSF----MSSMASTSGFHGYGSFPAG 517
Query: 513 GTGSAYGSYGSYSSGR 528
+ GS G YS GR
Sbjct: 518 --DNVLGSTGPYSYGR 531
Score = 108 bits (269), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/339 (31%), Positives = 158/339 (46%), Gaps = 68/339 (20%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGE--TVPGSEERVVTVYSASDE 98
E+ V++ LCP+ I +IG+GG +K++R + S I + + T G +E V+ V
Sbjct: 310 EELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIV------ 363
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
A E D S A +A+ + +E DED++ V +LLV S IGCVIGK
Sbjct: 364 -TATESPDDMKSMAVEAVL------LLQEYINDEDAEN---VKMQLLVSSKVIGCVIGKS 413
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN--- 215
G ++ IR T A I I K + D+LV++SGE S V+ AL QI RL ++
Sbjct: 414 GSVINEIRKRTNANICISKG--------KKDDLVEVSGEVSSVRDALIQIVLRLREDVLG 465
Query: 216 ----------PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAG 265
P+R+ + S S S G T + + +A G + GY AG
Sbjct: 466 DKDSVATRKPPARTDNC-------SFLSGSSNAGYTLPSFMSSMASTSG-FHGYGSFPAG 517
Query: 266 D---WSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS 322
D S YS R SS +L ++ P + V+GKGG + IR+ SGA I++ +S
Sbjct: 518 DNVLGSTGPYSYGRLPSSS---ALEILIPAHAMSKVMGKGGGNLENIRRISGAMIEISAS 574
Query: 323 STEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKI 361
T D + LS T+E Q RC+E +
Sbjct: 575 KTSHGDHIA----------LLSGTLE-----QMRCAENL 598
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 86.7 bits (213), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 196/417 (47%), Gaps = 61/417 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
S +L A I + ++ L PT+ P T+G S P
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMP---------------PPTSGPPSAMTPPYP 398
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D + +
Sbjct: 399 QFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMV- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R KI+ ++ + + + VP+ G +IGKGG
Sbjct: 455 ------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGK 508
Query: 391 IITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
+ E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 509 TVNELQNLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 561
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 175/388 (45%), Gaps = 72/388 (18%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRS 219
+ ++ I ETG +I I + L + + + G A +I +L + +
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLRE--AFE 350
Query: 220 QHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL 279
+LA N+HS S + P GP+ + +S P ++
Sbjct: 351 NDMLAV---NTHSGYFSSLYPHHQ---------FGPFPHH------------HSYPEQEI 386
Query: 280 SSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFF 339
+ L P +G +IGK GA I Q+ + +GA+IK+ + EG D VS +
Sbjct: 387 ------VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD----VSERMVI 434
Query: 340 EDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITE 394
++ EA + Q R K++ ++ + + VP+S G +IGKGG + E
Sbjct: 435 ---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 491
Query: 395 MRRLTKANIRILPKENLPKIASEDDEMV 422
++ LT A + I+P++ P E++E++
Sbjct: 492 LQNLTSAEV-IVPRDQTP---DENEEVI 515
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 382 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 440
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 441 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 485
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 486 GKTVNELQNLTSAEVIVPRDQ 506
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 83/199 (41%), Gaps = 41/199 (20%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSS---STEGDDCLITVSSKE 337
++E L+++ +G +IGK G + +I E+G I + S S + ITV
Sbjct: 272 AEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDLSIYNPERTITVKG-- 329
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERD-------SGLISF-------------------- 370
T+ A A + + + E E D SG S
Sbjct: 330 ----TVEACASAEIEIMKKLREAFENDMLAVNTHSGYFSSLYPHHQFGPFPHHHSYPEQE 385
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 386 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 441
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 442 QFKAQGRIFGKLKEENFFN 460
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
I F R+LVPT +G +IGK G I + + T++ + I KEN
Sbjct: 192 IDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN 234
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 182/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 186 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 245
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + +V K+L + +G +IGK G
Sbjct: 246 -------------EAC-----RMILEIMQKEADETKLAEEVPLKILAHNGFVGRLIGKEG 287
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD---NP 216
+ ++ I ETG +I I + L + + + G A +I +L + N
Sbjct: 288 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVRGTIEACANAEIEIMKKLREAFEND 345
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A V +P P+ + G + +
Sbjct: 346 MLAVNQQANLIPGLNLSALGIFSTGLSVLPPPAGPRGVPPSPPYHPFATHSGYFSSLYPH 405
Query: 270 SLYSAPRDDLSSKEF-SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ S E ++ L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 406 HHFGPFPHHHSYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 463
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 464 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 516
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 517 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 551
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 418 PEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 476
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 477 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 521
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 522 GKTVNELQNLTSAEVIVPRDQ 542
Score = 40.0 bits (92), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 422 TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEA 477
Query: 431 AKDALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 478 QFKAQGRIFGKLKEENFFN 496
Score = 37.7 bits (86), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
I F R+LVPT +G +IGK G I + + T++ + I KEN
Sbjct: 185 IDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN 227
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 80.1 bits (196), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 99/421 (23%), Positives = 189/421 (44%), Gaps = 69/421 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T SKI I + G+ E+ +TV+S + +
Sbjct: 194 DVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHSTPEGCS 253
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDE-DSDGGHQVTAKLLVPSDQIGCVIGKGG 159
+ R I E ++ + D+ ++ K+L ++ +G +IGK G
Sbjct: 254 S------------------ACRNIMEIMQKEAIDTKITEEIPLKILAHNNFVGRLIGKEG 295
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 296 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGTLDACAKAEEEIMKKVRESYE 351
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAAT----PIVGIAPLMGPYGGYKGDTAGDWSRS 270
N + HL ++ I + ++ L P AA+ P V P G GY+ A S +
Sbjct: 352 NDVAAMHLQSNLIPGLNLNALGLF-PGAASGGISPSVVSGPPPGAQAGYQSFGAQMESET 410
Query: 271 LYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCL 330
++ L P +G +IGK G I Q+ + +GA+IK+ + +G D
Sbjct: 411 VH---------------LFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APADGIDAK 453
Query: 331 ITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLI 385
+ +S EA + Q R K++ ++ + + VP+ G +I
Sbjct: 454 QRMV-------IISGPPEAQFKAQGRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVI 506
Query: 386 GKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDL---DLAKDALIQVMTRL 442
GKGG + E++ LT A + ++P++ P D +V+I+G LA+ + ++++++
Sbjct: 507 GKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHFYASQLAQRKIQEIISQV 563
Query: 443 R 443
R
Sbjct: 564 R 564
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 271
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 272 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 330
Query: 322 SSTEG 326
++TEG
Sbjct: 331 NATEG 335
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 206 AT----IPYRP 212
Score = 36.6 bits (83), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T L +P IGC+IG+ G+ I E+R+++ A I+I
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 329
Score = 33.9 bits (76), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTV 92
P + + P IG IIGR G + ++R + ++I+I GS ER +T+
Sbjct: 291 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 343
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 354 QPRCSEKIER---DSGL-ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKE 409
QP+ ++E + GL ++ T RLL+ +G +IGK G + +MR + A I I +
Sbjct: 26 QPQFGRRMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEG 84
Query: 410 NLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFD 448
N P + +V I+G D A + + ++ +
Sbjct: 85 NCP------ERIVTITGPTDAIFKAFAMIAYKFEEDIIN 117
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 79.7 bits (195), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/422 (22%), Positives = 197/422 (46%), Gaps = 67/422 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ +T+ S +
Sbjct: 193 PCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTGAAEKSITILSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
T+A A ++ ++ + A++++ E+ + K+L ++ +G +IGK
Sbjct: 253 TSA----------ACKSILEIMHKE-AQDIKFTEE------IPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
G+ ++ I +T +I I + L + + + G KA +I ++ ++N
Sbjct: 296 GRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSVETCAKAEEEIMKKIRESYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP---LMGPYGGYKGDTAGDWSRSLY 272
S +L A I + ++ L PT+ P P L PY
Sbjct: 354 DIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTLTPPY---------------- 397
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLIT 332
P+ + S E ++ L P ++G +IGK G I Q+ + +GA+IK+ + E D +
Sbjct: 398 --PQFEQSETE-TVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVR 452
Query: 333 VSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGK 387
+ ++ EA + Q R KI+ ++ + + + VP+ G +IGK
Sbjct: 453 MV-------IITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGK 505
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL---DLAKDALIQVMTRLR 443
GG + E++ L+ A + ++P++ P E+D+ +V+I+G +A+ + +++T+++
Sbjct: 506 GGKTVNELQSLSSAEV-VVPRDQTP---DENDQVVVKITGHFYACQVAQRKIQEILTQVK 561
Query: 444 AN 445
+
Sbjct: 562 QH 563
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 48/189 (25%)
Query: 35 QFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-VPGSEERVVTV- 92
QF +TV+ ++ P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 399 QFEQSETETVHLFI-PALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 457
Query: 93 ------YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLV 146
+ A + FVSP ++ + H RV
Sbjct: 458 GPPEAQFKAQGRIYGKIKEENFVSPKEEVKLEAHIRV----------------------- 494
Query: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE----LVQISGEASVVK 202
PS G VIGKGG+ V ++S + A++ + +D+ DE +V+I+G
Sbjct: 495 PSFAAGRVIGKGGKTVNELQSLSSAEVVVPRDQ-------TPDENDQVVVKITGHFYA-- 545
Query: 203 KALCQIASR 211
CQ+A R
Sbjct: 546 ---CQVAQR 551
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 79.3 bits (194), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 140/305 (45%), Gaps = 42/305 (13%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER+VT+ +D
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPTDAI------ 100
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
F + A A +K + +I + + VT +L+VP+ Q G +IGKGG ++ I
Sbjct: 101 --FKAFAMIA-YKFEEDIINS--MSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEI 155
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR------- 218
R TGAQ+++ D LP+ R+ V ISG + + + QI + ++P +
Sbjct: 156 RESTGAQVQVAGD-MLPNSTERA---VTISGTPDAIIQCVKQICVVMLESPPKGATIPYR 211
Query: 219 -----SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG--GYKGDTAGDWSRSL 271
+ + A + + ++ P T + +A P+ G L
Sbjct: 212 PKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPL 271
Query: 272 YSAPRD----------DLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDS 321
+S+ D S + L P IG +IG+ G IN+IRQ SGA IK+ +
Sbjct: 272 HSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI-A 330
Query: 322 SSTEG 326
++TEG
Sbjct: 331 NATEG 335
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 62/188 (32%)
Query: 134 SDGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDEL 191
S+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R +
Sbjct: 38 SEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG----NCPER---I 90
Query: 192 VQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAP 251
V I+G + KA IA + ++ I NS S+S P + P V
Sbjct: 91 VTITGPTDAIFKAFAMIAYKFEED-----------IINSMSNS-----PATSKPPV---- 130
Query: 252 LMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQ 311
+LRLV P + G +IGKGG+ I +IR+
Sbjct: 131 ---------------------------------TLRLVVPASQCGSLIGKGGSKIKEIRE 157
Query: 312 ESGAAIKV 319
+GA ++V
Sbjct: 158 STGAQVQV 165
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 34/191 (17%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + T+
Sbjct: 46 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI----SEGN-CPERIV-------TI 93
Query: 344 SATIEAVVRLQPRCSEKIERD----------SGLISFTTRLLVPTSRIGCLIGKGGSIIT 393
+ +A+ + + K E D + T RL+VP S+ G LIGKGGS I
Sbjct: 94 TGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 153
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAV 453
E+R T A +++ + LP + + V ISG DA+IQ + ++ + +
Sbjct: 154 EIRESTGAQVQVA-GDMLP---NSTERAVTISG----TPDAIIQCVKQICVVMLESPPKG 205
Query: 454 STFVPVLPYIP 464
+T +PY P
Sbjct: 206 AT----IPYRP 212
Score = 36.6 bits (83), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T L +P IGC+IG+ G+ I E+R+++ A I+I
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 329
Score = 33.9 bits (76), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTV 92
P + + P IG IIGR G + ++R + ++I+I GS ER +T+
Sbjct: 291 PPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITI 343
Score = 32.3 bits (72), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGD 427
++ T RLL+ +G +IGK G + +MR + A I I + N P + +V I+G
Sbjct: 44 VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI-SEGNCP------ERIVTITGP 96
Query: 428 LDLAKDALIQVMTRLRANLFD 448
D A + + ++ +
Sbjct: 97 TDAIFKAFAMIAYKFEEDIIN 117
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 109/232 (46%), Gaps = 24/232 (10%)
Query: 24 NKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGET-- 81
KR TG++ + F+ + L P GSIIG+GG+ + QL+ +T + I++ ++
Sbjct: 22 TKRSNTGEEGEYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKD 73
Query: 82 -VPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQ 139
PG+ ERV V ++ NA F++ + + + + L+ +
Sbjct: 74 FYPGTTERVCLVQGTAEALNAVHS---FIAEKVREIPQAMTKPEVVNILQPQTTMNPDRA 130
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
AKL+VP+ G +IGKGG V+ + ++GA +++ + P + +V +SGE
Sbjct: 131 KQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPE 187
Query: 200 VVKKALCQIASRLHDNPSRSQHL------LASAISNSHSSSGSLVGPTAATP 245
V KA+ I ++ ++P S L +A ++NS+ + P P
Sbjct: 188 QVHKAVSAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLP 239
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
E+ L+++ P G +IGKGG I Q+++E+GA IK+ S T CL+ +++
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + + I VR P+ K E + L TT +L+VP S G +IGKG
Sbjct: 92 L--NAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKG 149
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P+ + + +V +SG+ + A+ ++ +++
Sbjct: 150 GATVKAVMEQSGAWVQLSQK---PEGINLQERVVTVSGEPEQVHKAVSAIVQKVQ 201
Score = 35.0 bits (79), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 143 KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKD-EHLPSCALRSDELVQISGEASVV 201
++ VP + +G ++GKGG+ + + TGA+I+I K E LP R V I+G +
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRR---VTITGSPAAT 466
Query: 202 KKALCQIASRL 212
+ A I+ R+
Sbjct: 467 QAAQYLISQRV 477
Score = 32.3 bits (72), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK-ENLP 412
+ VP + +G ++GKGG + E + LT A I+I K E LP
Sbjct: 410 EIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLP 450
Score = 32.3 bits (72), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 49 CPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSEERVVTVYSASDETNAFE 103
P +G+I+G+GG+ + + + T ++I+I GE +PG+ R VT+ + T A +
Sbjct: 413 VPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITGSPAATQAAQ 470
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 180/399 (45%), Gaps = 51/399 (12%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G +K + T+S++ I + G+ E+ VT+++ + T+
Sbjct: 193 DFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENSGAAEKPVTIHATPEGTS 252
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTAKLLVPSDQIGCVIGKGG 159
+A R+I E ++ + D + ++ K+L + +G +IGK G
Sbjct: 253 -------------EAC-----RMILEIMQKEADETKLAEEIPLKILAHNGLVGRLIGKEG 294
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNP 216
+ ++ I ETG +I I + L + + + G A +I +L +N
Sbjct: 295 RNLKKIEHETGTKITISSLQDL--SIYNPERTITVKGTVEACASAEIEIMKKLREAFEND 352
Query: 217 SRSQHLLASAISNSH-------SSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSR 269
+ + A+ I + S+ S++ P A A P+ + G + +
Sbjct: 353 MLAVNQQANLIPGLNLSALGIFSTGLSVLSPPAGPRGAPPAAPYHPFTTHSGYFSSLYPH 412
Query: 270 SLYSA-PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P ++ + L P +G +IGK GA I Q+ + +GA+IK+ + EG D
Sbjct: 413 HQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI--APAEGPD 470
Query: 329 CLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGC 383
VS + ++ EA + Q R K++ ++ + + VP+S G
Sbjct: 471 ----VSERMVI---ITGPPEAQFKAQGRIFGKLKEENFFNPKEEVKLEAHIRVPSSTAGR 523
Query: 384 LIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+IGKGG + E++ LT A + I+P++ P E++E++
Sbjct: 524 VIGKGGKTVNELQNLTSAEV-IVPRDQTP---DENEEVI 558
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE + P + +G+IIG+ G +KQL + I+I P ER+V + + E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVII-TGPPE 483
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
G F ++ F + V ++ A + VPS G VIGKG
Sbjct: 484 AQFKAQGRIFGKLKEENFFNPKEEV---------------KLEAHIRVPSSTAGRVIGKG 528
Query: 159 GQIVQNIRSETGAQIRILKDE 179
G+ V +++ T A++ + +D+
Sbjct: 529 GKTVNELQNLTSAEVIVPRDQ 549
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 374 LLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKD 433
L +PT +G +IGK G+ I ++ R A+I+I P E P ++ + MV I+G +
Sbjct: 432 LFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEG-PDVS---ERMVIITGPPEAQFK 487
Query: 434 ALIQVMTRLR-ANLFD 448
A ++ +L+ N F+
Sbjct: 488 AQGRIFGKLKEENFFN 503
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
I F R+LVPT +G +IGK G I + + T++ + I KEN
Sbjct: 192 IDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKEN 234
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 75.9 bits (185), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 137/297 (46%), Gaps = 46/297 (15%)
Query: 39 GPEDTV---YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYS 94
GPE ++ R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+
Sbjct: 11 GPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI-- 65
Query: 95 ASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
+ T A ++ FK+ + + A G S VT +L++P+ Q G +
Sbjct: 66 -TGSTAAVFHAVSMIA------FKLDEDLCAAPANGGSVSR--PPVTLRLVIPASQCGSL 116
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IGK G ++ IR TGAQ+++ D LP+ R+ V +SG + + QI + + +
Sbjct: 117 IGKAGTKIKEIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILE 172
Query: 215 NPSRSQH------------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGD 262
+P + LL++ S V P T + ++ P+
Sbjct: 173 SPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVV 232
Query: 263 TAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
D P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 233 PGMD--------PSTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGSVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 80/309 (25%), Positives = 123/309 (39%), Gaps = 92/309 (29%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R + I+G +
Sbjct: 18 LTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER---ITTITGSTA 70
Query: 200 VVKKALCQIASRLHDN-------------PSRSQHLLASAISNSHSSSGSLVGPTAATPI 246
V A+ IA +L ++ P + L+ A S GSL+G A T I
Sbjct: 71 AVFHAVSMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPA-----SQCGSLIG-KAGTKI 124
Query: 247 VGIAPLMGPYGGYKGDTAGDWSRS----------------------LYSAPRDDLSSKEF 284
I G GD + + L S P+
Sbjct: 125 KEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHP 184
Query: 285 SLRL--VCPVANIG-GVIGKGGAI----INQIRQESGAAIKVDSSST-EGDDCLITVSSK 336
SL L V AN G V G+ GA+ + +++Q SG A+ S S G D SS+
Sbjct: 185 SLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGMDPSTQTSSQ 244
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMR 396
EF LVP IGC+IG+ GS I+E+R
Sbjct: 245 EF------------------------------------LVPNDLIGCVIGRQGSKISEIR 268
Query: 397 RLTKANIRI 405
+++ A+I+I
Sbjct: 269 QMSGAHIKI 277
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 43/288 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH-- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 222 ----------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
LL++ S V P T + ++ P+ D
Sbjct: 182 YHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVTKLQQLSGHAVPFASPSMVPGLD----- 236
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 237 ---PSTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 60/189 (31%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIA 250
+ I+G + V A+ IA +L ++ L +A +N
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDED-------LCAAPAN--------------------- 93
Query: 251 PLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIR 310
GG ++S +LRLV P + G +IGK G I +IR
Sbjct: 94 ------GG-------------------NVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 311 QESGAAIKV 319
+ +GA ++V
Sbjct: 129 ETTGAQVQV 137
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 132/288 (45%), Gaps = 43/288 (14%)
Query: 45 YRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGS-EERVVTVYSASDETNAFE 103
R L +++GSIIG+ GE VK++R + ++I I E GS ER+ T+ + T A
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTI---TGSTAAVF 73
Query: 104 DGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++ FK+ + + A G S VT +L++P+ Q G +IGK G ++
Sbjct: 74 HAVSMIA------FKLDEDLCAAPANGGNVSR--PPVTLRLVIPASQCGSLIGKAGTKIK 125
Query: 164 NIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQH-- 221
IR TGAQ+++ D LP+ R+ V +SG + + QI + + ++P +
Sbjct: 126 EIRETTGAQVQVAGD-LLPNSTERA---VTVSGVPDAIILCVRQICAVILESPPKGATIP 181
Query: 222 ----------LLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
LL++ S V P T + ++ P+ D
Sbjct: 182 YHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSSHAVPFATPSVVPGLD----- 236
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P SS+EF + P IG VIG+ G+ I++IRQ SGA IK+
Sbjct: 237 ---PGTQTSSQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 16/184 (8%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE 340
S +LR++ +G +IGK G + +IR++S A I + S IT S+ F
Sbjct: 15 SITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGSTAAVFH 74
Query: 341 --DTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
++ ++ + P + R T RL++P S+ G LIGK G+ I E+R
Sbjct: 75 AVSMIAFKLDEDLCAAPANGGNVSRPP----VTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDR--EGAVSTF 456
T A +++ + LP + + V +SG DA+I + ++ A + + +GA +
Sbjct: 131 TGAQVQVA-GDLLP---NSTERAVTVSG----VPDAIILCVRQICAVILESPPKGATIPY 182
Query: 457 VPVL 460
P L
Sbjct: 183 HPSL 186
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 129/298 (43%), Gaps = 52/298 (17%)
Query: 131 DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE 190
+E+ + +T ++L+ ++G +IGK G+ V+ IR ++ A+I I + SC R
Sbjct: 9 EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG----SCPER--- 61
Query: 191 LVQISGEASVVKKALCQIASRLHD----------NPSRSQHLLASAISNSHSSSGSLVGP 240
+ I+G + V A+ IA +L + N SR L I S GSL+G
Sbjct: 62 ITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQC--GSLIG- 118
Query: 241 TAATPIVGIAPLMGPYGGYKGDTAGDWS-RSLYSAPRDDLSSKEFSLRLVCPVANIGGVI 299
A T I I G GD + + R++ + D + +R +C
Sbjct: 119 KAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD--AIILCVRQIC--------- 167
Query: 300 GKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFE---DTLSATIEAVVRLQPR 356
A+I + GA I S + G + +S+ + F + T V +LQ
Sbjct: 168 ----AVILE-SPPKGATIPYHPSLSLGT---VLLSANQGFSVQGQYGAVTPAEVTKLQQL 219
Query: 357 CSEKIE---------RDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
S + D G + + LVP IGC+IG+ GS I+E+R+++ A+I+I
Sbjct: 220 SSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 33.9 bits (76), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTV 92
G + + +L P IG +IGR G + ++R + + I+IG G+ ER VT+
Sbjct: 238 GTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTI 291
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/396 (22%), Positives = 177/396 (44%), Gaps = 61/396 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +A
Sbjct: 209 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCSA--- 265
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++I E ++ + +D+ ++ K+L ++ +G +IGK G+ ++
Sbjct: 266 ---------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 310
Query: 164 NIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSR 218
I +T +I I L+D L + + + G KA +I ++ ++N
Sbjct: 311 KIEQDTDTKITISPLQDLTL----YNPERTITVKGSIEPCAKAEEEIMKKIRESYENDIA 366
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
+ +L A I + ++ +G+ P + S P
Sbjct: 367 AMNLQAHLIPGLNLNA------------LGLFPSSSSGMPPPSVGVPSPTSSTSYPPFGQ 414
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
E ++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 415 QPESE-TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV---- 467
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP+ G +IGKGG +
Sbjct: 468 ---IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVN 524
Query: 394 EMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
E++ LT A + ++P++ P E+DE +V+I+G
Sbjct: 525 ELQNLTSAEV-VVPRDQTP---DENDEVVVKITGHF 556
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
E LR++ P +G +IGK GA I I +++ + I + G + IT+ S +
Sbjct: 205 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST---PE 261
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFT----TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + ++ + +++++ FT ++L + +G LIGK G + ++ +
Sbjct: 262 GCSAACKIIMEI-------MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 314
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
T I I P ++L + + + G ++ A ++M ++R + + A++
Sbjct: 315 DTDTKITISPLQDL--TLYNPERTITVKGSIEPCAKAEEEIMKKIRESYENDIAAMNLQA 372
Query: 458 PVLP 461
++P
Sbjct: 373 HLIP 376
Score = 41.2 bits (95), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 64/145 (44%), Gaps = 25/145 (17%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V +
Sbjct: 416 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPP-- 473
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKL----LVPSDQIGCV 154
+A FK R+ + E++ G + KL VPS G V
Sbjct: 474 ---------------EAQFKAQGRIYG---KLKEENFFGPKEEVKLETHIKVPSYAAGRV 515
Query: 155 IGKGGQIVQNIRSETGAQIRILKDE 179
IGKGG+ V +++ T A++ + +D+
Sbjct: 516 IGKGGKTVNELQNLTSAEVVVPRDQ 540
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
+V ++LVP+ +G +IGK G ++NI +T ++I I + E+
Sbjct: 205 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN 246
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 140/341 (41%), Gaps = 74/341 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR------- 211
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVT 175
Query: 212 --LHDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYG-- 257
PS S + A + S H++ + P P + + G Y
Sbjct: 176 IPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIP 235
Query: 258 ------------------------GYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVA 293
G+ G + Y A D S++ S L P
Sbjct: 236 QPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWAGLDA-SAQTTSHELTIPND 294
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 295 LIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 335
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 135 DGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQ 193
D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I +D V
Sbjct: 279 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VEGSTDRQVT 333
Query: 194 ISGEASVVKKALCQIASRL 212
I+G A+ + A I RL
Sbjct: 334 ITGSAASISLAQYLINVRL 352
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
L +P IGC+IG+ G+ I E+R+++ A I+I
Sbjct: 288 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 320
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTV 92
+ T + P IG IIGR G + ++R + ++I+I V GS +R VT+
Sbjct: 283 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTI 334
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 178/396 (44%), Gaps = 61/396 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFED 104
R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +A
Sbjct: 208 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCSA--- 264
Query: 105 GDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQ 163
++I E ++ + +D+ ++ K+L ++ +G +IGK G+ ++
Sbjct: 265 ---------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLK 309
Query: 164 NIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSR 218
I +T +I I L+D L + + + G KA ++ ++ ++N
Sbjct: 310 KIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEVMKKIRESYENDIA 365
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
+ +L A I + ++ L P+++ A + P G S
Sbjct: 366 AMNLQAHLIPGLNLNALGLFPPSSSGMPPPSAGVSSPTTSASYPPFGQQPESE------- 418
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 419 ------TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV---- 466
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + + VP+ G +IGKGG +
Sbjct: 467 ---IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVN 523
Query: 394 EMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 524 ELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 555
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 85/184 (46%), Gaps = 17/184 (9%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEG-DDCLITVSSKEFFED 341
E LR++ P +G +IGK GA I I +++ + I + G + IT+ S +
Sbjct: 204 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHST---PE 260
Query: 342 TLSATIEAVVRLQPRCSEKIERDSGLISFT----TRLLVPTSRIGCLIGKGGSIITEMRR 397
SA + ++ + +++++ FT ++L + +G LIGK G + ++ +
Sbjct: 261 GCSAACKIIMEI-------MQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQ 313
Query: 398 LTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFV 457
T I I P ++L + + + G ++ A +VM ++R + + A++
Sbjct: 314 DTDTKITISPLQDL--TLYNPERTITVKGSIETCAKAEEEVMKKIRESYENDIAAMNLQA 371
Query: 458 PVLP 461
++P
Sbjct: 372 HLIP 375
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 23/144 (15%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 415 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPE- 473
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIGCVI 155
A FK R+ + +E+ G + + A + VPS G VI
Sbjct: 474 ----------------AQFKAQGRIYGK--LKEENFFGPKEEVKLEAHIKVPSYAAGRVI 515
Query: 156 GKGGQIVQNIRSETGAQIRILKDE 179
GKGG+ V +++ T A++ + +D+
Sbjct: 516 GKGGKTVNELQNLTSAEVVVPRDQ 539
Score = 35.4 bits (80), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEH 180
+V ++LVP+ +G +IGK G ++NI +T ++I I + E+
Sbjct: 204 EVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN 245
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 72.8 bits (177), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 144/343 (41%), Gaps = 75/343 (21%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL------ 212
G ++ IR TGAQ+++ D LP+ R+ + I K +C +
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPP 175
Query: 213 -------HDNPSRSQHLLA----------SAISNSHSSSGSLVGPTAATPIVGIAPLMGP 255
PS S + A + S H++ + P P + + G
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQ 235
Query: 256 YGGYKGD----------------TAGD--WSRSLYSAPRD------DLSSKEFSLRLVCP 291
Y + D T G+ +S S+P D S++ S L P
Sbjct: 236 YAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTSHELTIP 295
Query: 292 VANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
IG +IG+ GA IN+IRQ SGA IK+ + D +T++
Sbjct: 296 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDRQVTIT 338
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 62/187 (33%)
Query: 135 DGGHQVTA--KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELV 192
+GG VT +LL+ ++G +IGK G+ V+ +R E+GA+I I + +C R ++
Sbjct: 7 EGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG----NCPER---II 59
Query: 193 QISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPL 252
++G + + KA I +L ++ ++S+++NS TAA
Sbjct: 60 TLAGPTNAIFKAFAMIIDKLEED-------ISSSMTNS----------TAA--------- 93
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
S +LRLV P + G +IGKGG I +IR+
Sbjct: 94 ---------------------------SRPPVTLRLVVPASQCGSLIGKGGCKIKEIRES 126
Query: 313 SGAAIKV 319
+GA ++V
Sbjct: 127 TGAQVQV 133
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + ++R+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP S+ G LIGKGG I
Sbjct: 62 AGPTNAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 6/87 (6%)
Query: 127 ELRGDEDSDGGHQVTA-KLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCA 185
E++G D Q T+ +L +P+D IGC+IG+ G + IR +GAQI+I
Sbjct: 274 EVKGYWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANP-----VE 328
Query: 186 LRSDELVQISGEASVVKKALCQIASRL 212
+D V I+G A+ + A I RL
Sbjct: 329 GSTDRQVTITGSAASISLAQYLINVRL 355
Score = 35.8 bits (81), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 5 RNSYGKRSHSQTDYA---DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
+ S+ +H T ++ P + Y G D + T + P IG IIGR
Sbjct: 252 QQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASA-----QTTSHELTIPNDLIGCIIGRQ 306
Query: 62 GEIVKQLRIDTKSKIRIGETVPGSEERVVTV 92
G + ++R + ++I+I V GS +R VT+
Sbjct: 307 GAKINEIRQMSGAQIKIANPVEGSTDRQVTI 337
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 23/33 (69%)
Query: 373 RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
L +P IGC+IG+ G+ I E+R+++ A I+I
Sbjct: 291 ELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI 323
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/382 (21%), Positives = 165/382 (43%), Gaps = 55/382 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++++S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGK 157
+A ++I E ++ + +D+ +V K+L ++ +G +IGK
Sbjct: 253 CSAA------------------CKMILEIMQKEAKDTKTADEVPLKILAHNNFVGRLIGK 294
Query: 158 GGQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDN 215
G+ ++ + +T +I I L+D L + + + G KA +I ++ +
Sbjct: 295 EGRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGSIENCCKAEQEIMKKVRE- 349
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAP 275
++ +A+ SH G + P A P +G S + P
Sbjct: 350 --AYENDVAAMSLQSHLIPGLNLAAVGLFPASSNAVPPPP-----SSVSGAAPYSSFMPP 402
Query: 276 RDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSS 335
+ ++ + P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 403 EQE------TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV-- 454
Query: 336 KEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGS 390
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 455 -------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGK 507
Query: 391 IITEMRRLTKANIRILPKENLP 412
+ E++ LT A + ++P++ P
Sbjct: 508 TVNELQNLTAAEV-VVPRDQTP 528
Score = 35.8 bits (81), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDL 430
T + +P +G +IGK G I ++ R A+I+I P P+ MV I+G +
Sbjct: 406 TVHVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAP----PETPDSKVRMVVITGPPEA 461
Query: 431 AKDALIQVMTRLRANLF 447
A ++ +L+ F
Sbjct: 462 QFKAQGRIYGKLKEENF 478
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T L +P + IGC+IG+ G+ I E+R+++ A I+I
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTV 92
T + P IG IIGR G + ++R + ++I+I V GS R VT+
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTI 329
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T L +P + IGC+IG+ G+ I E+R+++ A I+I
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTV 92
T + P IG IIGR G + ++R + ++I+I V GS R VT+
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTI 329
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T L +P + IGC+IG+ G+ I E+R+++ A I+I
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTV 92
T + P IG IIGR G + ++R + ++I+I V GS R VT+
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTI 329
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 141/325 (43%), Gaps = 77/325 (23%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDG 105
R L +++GSIIG+ GE VK++R ++ ++I I E ER++T+ ++
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN-------- 66
Query: 106 DKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ-------VTAKLLVPSDQIGCVIGKG 158
A+FK +I ++L D +S + VT +L+VP+ Q G +IGKG
Sbjct: 67 ---------AIFKAFAMII-DKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKG 116
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G ++ IR TGAQ+++ D LP+ R+ + I+G V + + QI + + S+
Sbjct: 117 GCKIKEIRESTGAQVQVAGD-MLPNSTERA---ITIAGVPQSVTECVKQICLVMLETLSQ 172
Query: 219 S------------------------QHLLASAISNSHSSSGSLVGPTAATPIVG---IAP 251
S Q + A H++ P A I G I+P
Sbjct: 173 SPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISP 232
Query: 252 L-----------------MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVAN 294
L M G+ G + Y A D +S + + L P
Sbjct: 233 LDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLD--ASTQTTHELTIPNNL 290
Query: 295 IGGVIGKGGAIINQIRQESGAAIKV 319
IG +IG+ GA IN+IRQ SGA IK+
Sbjct: 291 IGCIIGRQGANINEIRQMSGAQIKI 315
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 79/180 (43%), Gaps = 60/180 (33%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T +LL+ ++G +IGK G+ V+ IR E+GA+I I + + P + ++ ++G +
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI-SEGNCP------ERIITLTGPTN 66
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ KA I +L ++ + S+++NS TAA
Sbjct: 67 AIFKAFAMIIDKLEED-------INSSMTNS----------TAA---------------- 93
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
S +LRLV P G +IGKGG I +IR+ +GA ++V
Sbjct: 94 --------------------SRPPVTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQV 133
Score = 50.8 bits (120), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 67/132 (50%), Gaps = 22/132 (16%)
Query: 284 FSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTL 343
++RL+ +G +IGK G + +IR+ESGA I + +EG+ C + TL
Sbjct: 14 LTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI----SEGN-CPERI-------ITL 61
Query: 344 SATIEAVVRLQPRCSEKIERD--SGLIS--------FTTRLLVPTSRIGCLIGKGGSIIT 393
+ A+ + +K+E D S + + T RL+VP ++ G LIGKGG I
Sbjct: 62 TGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIK 121
Query: 394 EMRRLTKANIRI 405
E+R T A +++
Sbjct: 122 EIRESTGAQVQV 133
Score = 36.6 bits (83), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 25/35 (71%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T L +P + IGC+IG+ G+ I E+R+++ A I+I
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 315
Score = 33.5 bits (75), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTV 92
T + P IG IIGR G + ++R + ++I+I V GS R VT+
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQVTI 329
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 173/394 (43%), Gaps = 65/394 (16%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDN 215
++ + +T +I I L+D L + + + G +A +I ++ ++N
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVREAYEN 353
Query: 216 PSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMG--PYGGYKGDTAGDWSRSLYS 273
+ L + I + ++ L +++ + + G PYG S
Sbjct: 354 DVAAMSLQSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGAAPYG------------SFMQ 401
Query: 274 APRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITV 333
AP ++ +++ P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 402 APEQEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV 455
Query: 334 SSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKG 388
++ EA + Q R K++ ++ + T + VP S G +IGKG
Sbjct: 456 ---------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKG 506
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMV 422
G + E++ LT A + ++P++ P E+D+++
Sbjct: 507 GKTVNELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 49.3 bits (116), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVVITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
+ RLLVPT +G +IGK G+ I + + T++ I + KEN
Sbjct: 194 VDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Score = 33.1 bits (74), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY---KGDTAGDWSRSLYSA 274
+ QH+ +S S+S + P V + + GP +G G +
Sbjct: 424 KGQHI--KQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFKAQGRIYGKLKEENFFG 481
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLIT 332
P++++ + + P + G VIGKGG +N+++ + A + V D + E D ++
Sbjct: 482 PKEEV---KLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVK 538
Query: 333 V 333
+
Sbjct: 539 I 539
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 96/458 (20%), Positives = 195/458 (42%), Gaps = 81/458 (17%)
Query: 3 GQRNSYGKRSHSQTDYADHG-PNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRG 61
G+R YG R S+ G P+K ++ D R L P + +G+IIG+
Sbjct: 170 GRRPGYGPRGTSRQMSPGSGIPSKHQHA------------DIPLRLLVPTQYVGAIIGKE 217
Query: 62 GEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETNAFEDGDKFVSPAQDALFKVH 120
G ++ + T+SKI + + G+ E+ ++++S + +A
Sbjct: 218 GATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEGCSAA------------------ 259
Query: 121 DRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRI--LK 177
R+I E + + +D+ +V K+L ++ +G +IGK G+ ++ + +T +I I L+
Sbjct: 260 CRMILEIMNQEAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQ 319
Query: 178 DEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HDNPSRSQHLLASAISNSHSSS 234
D L + + + G A +I ++ +DN +A+ +H
Sbjct: 320 DLTL----YNPERTITVKGSIEACCLAEQEIMKKVREAYDND------IAAMNQQTHLIP 369
Query: 235 GSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDL-SSKEFSLRLVCPVA 293
G +G +G + S+ P + +S++ ++ + P
Sbjct: 370 GLNLG------------AIGLFPPSSAMPPPALGNSVPGPPYGPMGASEQETVHVYIPAQ 417
Query: 294 NIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRL 353
+G +IGK G I Q+ + +GA+IK+ + + + ++ EA +
Sbjct: 418 AVGALIGKKGQHIKQLSRFAGASIKIAPAEAPDSKMRMVI---------VTGPPEAQFKA 468
Query: 354 QPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPK 408
Q R K++ ++ + T + V + G +IGKGG + E++ LT A + ++P+
Sbjct: 469 QGRIYGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAEV-VVPR 527
Query: 409 ENLPKIASEDDEMVQISGDL---DLAKDALIQVMTRLR 443
E P D +V+I G LA+ + ++T+++
Sbjct: 528 EQTPD--EHDQVIVKIIGHFYASQLAQRKIRDILTQVK 563
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 91/220 (41%), Gaps = 17/220 (7%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ LRL+ P +G +IGK GA I I +++ + I V G + K +
Sbjct: 198 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAG------AAEKPISIHS 251
Query: 343 LSATIEAVVRLQPRCSEKIERDSGLI-SFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
A R+ + +D+ ++L + +G LIGK G + ++ + T
Sbjct: 252 TPEGCSAACRMILEIMNQEAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDT 311
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLRANLFDREGAVSTFVPVLP 461
I I P ++L E + + G ++ A ++M ++R + A++ ++P
Sbjct: 312 KITISPLQDLTLYNPE--RTITVKGSIEACCLAEQEIMKKVREAYDNDIAAMNQQTHLIP 369
Query: 462 YIPVSENGSDGLNYESRDSKRHGR-----GPPYGGYGSSD 496
+ + G+ GL S GPPYG G+S+
Sbjct: 370 GLNL---GAIGLFPPSSAMPPPALGNSVPGPPYGPMGASE 406
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 172/391 (43%), Gaps = 55/391 (14%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDE 98
P D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S +
Sbjct: 193 PVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEG 252
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
+ S + L +H +D+ +V K+L ++ +G +IGK
Sbjct: 253 CS---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKE 295
Query: 159 GQIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
G+ ++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 296 GRNLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE-- 349
Query: 217 SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPR 276
++ +A+ SH G + AA + + P A +S S AP
Sbjct: 350 -AYENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPE 404
Query: 277 DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK 336
++ +++ P +G +IGK G I Q+ + + A+IK+ T + V
Sbjct: 405 QEM------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVV--- 455
Query: 337 EFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSI 391
++ EA + Q R K++ ++ + T + VP S G +IGKGG
Sbjct: 456 ------ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKT 509
Query: 392 ITEMRRLTKANIRILPKENLPKIASEDDEMV 422
+ E++ LT A + ++P++ P E+D+++
Sbjct: 510 VNELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 33.1 bits (74), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY---KGDTAGDWSRSLYSA 274
+ QH+ +S S+S + P V + + GP +G G +
Sbjct: 424 KGQHI--KQLSRFASASIKIAPPETPDSKVRMVVITGPPEAQFKAQGRIYGKLKEENFFG 481
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLIT 332
P++++ + + P + G VIGKGG +N+++ + A + V D + E D ++
Sbjct: 482 PKEEV---KLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVK 538
Query: 333 V 333
+
Sbjct: 539 I 539
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 35 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 87 KSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 146
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ I ++GA +++ P + +V +
Sbjct: 147 I--KQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTV 199
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 200 SGEPEQNRKAVELIIQKIQEDP 221
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
++ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I +R P+ K E S L TT +++VP S G +IGKG
Sbjct: 109 L--NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKG 166
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + + A+ ++ +++
Sbjct: 167 GATVKAIMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVELIIQKIQ 218
Score = 42.0 bits (97), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 370 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 429
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 430 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 468
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSEERVVTVYSASDETN 100
V P +G+I+G+GG+ + + + T ++I+I GE VPG+ R VT+ T
Sbjct: 399 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQ 458
Query: 101 AFE 103
A +
Sbjct: 459 AAQ 461
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 34 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 85
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGDEDS 134
++ PG+ ERV + + NA +K Q+ ++ + + D
Sbjct: 86 KSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 145
Query: 135 DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQI 194
QV K++VP+ G +IGKGG V+ I ++GA +++ P + +V +
Sbjct: 146 I--KQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL---SQKPDGINLQERVVTV 198
Query: 195 SGEASVVKKALCQIASRLHDNP 216
SGE +KA+ I ++ ++P
Sbjct: 199 SGEPEQNRKAVELIIQKIQEDP 220
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 19/175 (10%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLITVSSKE 337
++ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI + +
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 107
Query: 338 FFEDTLSATIEAVVRLQPRCSEKIERDSGLISFTT---------RLLVPTSRIGCLIGKG 388
+ + I +R P+ K E S L TT +++VP S G +IGKG
Sbjct: 108 L--NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKG 165
Query: 389 GSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
G+ + + + A +++ K P + + +V +SG+ + + A+ ++ +++
Sbjct: 166 GATVKAIMEQSGAWVQLSQK---PDGINLQERVVTVSGEPEQNRKAVELIIQKIQ 217
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 369 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 428
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 429 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 467
Score = 34.3 bits (77), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSEERVVTVYSASDETN 100
V P +G+I+G+GG+ + + + T ++I+I GE VPG+ R VT+ T
Sbjct: 398 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQ 457
Query: 101 AFE 103
A +
Sbjct: 458 AAQ 460
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/400 (21%), Positives = 176/400 (44%), Gaps = 61/400 (15%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI I + G+ E+ +T++S + +
Sbjct: 196 DVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS 255
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGD-EDSDGGHQVTAKLLVPSDQIGCVIGKGG 159
++I E ++ + +D+ ++ K+L ++ +G +IGK G
Sbjct: 256 T------------------ACKIIMEIMQKEAQDTKFTEEIPLKILAHNNFVGRLIGKEG 297
Query: 160 QIVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL---HD 214
+ ++ I +T +I I L+D L + + + G KA +I ++ ++
Sbjct: 298 RNLKKIEQDTDTKITISPLQDLTL----YNPERTITVKGSIETCAKAEEEIMKKIRESYE 353
Query: 215 NPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSA 274
N + +L A I + ++ L P+++ + G S
Sbjct: 354 NDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSVASAAAAASYPPFGQQPESE--- 410
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS 334
++ L P +G +IGK G I Q+ + +GA+IK+ + EG D + +
Sbjct: 411 ----------TVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKI--APAEGPDAKLRMV 458
Query: 335 SKEFFEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGG 389
++ EA + Q R K++ ++ + + VP+ G +IGKGG
Sbjct: 459 -------IITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGG 511
Query: 390 SIITEMRRLTKANIRILPKENLPKIASEDDE-MVQISGDL 428
+ E++ LT A + ++P++ P E+D+ +V+I+G
Sbjct: 512 KTVNELQNLTSAEV-VVPRDQTP---DENDQVVVKITGHF 547
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 79/177 (44%), Gaps = 33/177 (18%)
Query: 40 PEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETV-PGSEERVVTVYSASDE 98
PE P +G+IIG+ G+ +KQL + I+I P ++ R+V + +
Sbjct: 407 PESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIITGPPE- 465
Query: 99 TNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQ---VTAKLLVPSDQIGCVI 155
A FK R+ + +E+ G + + A + VPS G VI
Sbjct: 466 ----------------AQFKAQGRIYGK--LKEENFFGPKEEVKLEAHIKVPSYAAGRVI 507
Query: 156 GKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDE-LVQISGEASVVKKALCQIASR 211
GKGG+ V +++ T A++ + +D+ +D+ +V+I+G CQ+A R
Sbjct: 508 GKGGKTVNELQNLTSAEVVVPRDQ----TPDENDQVVVKITGHFYA-----CQLAQR 555
Score = 40.8 bits (94), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 87/201 (43%), Gaps = 20/201 (9%)
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSST 324
G S + P+ D+ LR++ P +G +IGK GA I I +++ + I +
Sbjct: 183 GSPSATTRQKPQSDVP-----LRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKEN 237
Query: 325 EGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIERDSGLISFT----TRLLVPTSR 380
G + K T+ +T E E +++++ FT ++L +
Sbjct: 238 AG------AAEKPI---TIHSTPEGCSTACKIIMEIMQKEAQDTKFTEEIPLKILAHNNF 288
Query: 381 IGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMT 440
+G LIGK G + ++ + T I I P ++L E + + G ++ A ++M
Sbjct: 289 VGRLIGKEGRNLKKIEQDTDTKITISPLQDLTLYNPE--RTITVKGSIETCAKAEEEIMK 346
Query: 441 RLRANLFDREGAVSTFVPVLP 461
++R + + A++ ++P
Sbjct: 347 KIRESYENDIAAMNLQAHLIP 367
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/389 (21%), Positives = 171/389 (43%), Gaps = 55/389 (14%)
Query: 42 DTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTVYSASDETN 100
D R L P + +G+IIG+ G ++ + T+SKI + + G+ E+ ++V+S + +
Sbjct: 195 DIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTPEGCS 254
Query: 101 AFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
S + L +H +D+ +V K+L ++ +G +IGK G+
Sbjct: 255 ---------SACKMILEIMHKEA--------KDTKTADEVPLKILAHNNFVGRLIGKEGR 297
Query: 161 IVQNIRSETGAQIRI--LKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
++ + +T +I I L+D L + + + G +A +I ++ +
Sbjct: 298 NLKKVEQDTETKITISSLQDLTL----YNPERTITVKGAIENCCRAEQEIMKKVRE---A 350
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
++ +A+ SH G + AA + + P A +S S AP +
Sbjct: 351 YENDVAAMSLQSHLIPGLNL---AAVGLFPASSSAVPPPPSSVTGAAPYS-SFMQAPEQE 406
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEF 338
+ +++ P +G +IGK G I Q+ + + A+IK+ T + +
Sbjct: 407 M------VQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVI----- 455
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGL-----ISFTTRLLVPTSRIGCLIGKGGSIIT 393
++ EA + Q R K++ ++ + T + VP S G +IGKGG +
Sbjct: 456 ----ITGPPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVN 511
Query: 394 EMRRLTKANIRILPKENLPKIASEDDEMV 422
E++ LT A + ++P++ P E+D+++
Sbjct: 512 ELQNLTAAEV-VVPRDQTP---DENDQVI 536
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 31/152 (20%)
Query: 36 FIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG-ETVPGSEERVVTV-- 92
F+ PE + + P + +G+IIG+ G+ +KQL + I+I P S+ R+V +
Sbjct: 399 FMQAPEQEMVQVFIPAQAVGAIIGKKGQHIKQLSRFASASIKIAPPETPDSKVRMVIITG 458
Query: 93 -----YSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
+ A + F P ++ + H R VP
Sbjct: 459 PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHIR-----------------------VP 495
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDE 179
+ G VIGKGG+ V +++ T A++ + +D+
Sbjct: 496 ASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQ 527
Score = 37.4 bits (85), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 368 ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
+ RLLVPT +G +IGK G+ I + + T++ I + KEN
Sbjct: 194 VDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN 236
Score = 33.1 bits (74), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 10/121 (8%)
Query: 218 RSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY---KGDTAGDWSRSLYSA 274
+ QH+ +S S+S + P V + + GP +G G +
Sbjct: 424 KGQHI--KQLSRFASASIKIAPPETPDSKVRMVIITGPPEAQFKAQGRIYGKLKEENFFG 481
Query: 275 PRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLIT 332
P++++ + + P + G VIGKGG +N+++ + A + V D + E D ++
Sbjct: 482 PKEEV---KLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVVPRDQTPDENDQVIVK 538
Query: 333 V 333
+
Sbjct: 539 I 539
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 62.8 bits (151), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 100/224 (44%), Gaps = 40/224 (17%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 35 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 80 ET---VPGSEERVVTVYSASDETNAFED--GDKFVSPAQD-------ALFKVHDRVIAEE 127
++ PG+ ERV + + NA +K Q+ ++ + V +
Sbjct: 87 KSKDFYPGTTERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDR 146
Query: 128 LRGDEDSDG---------------GHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQ 172
++ S +QV K++VP+ G +IGKGG V+ I ++GA
Sbjct: 147 IKQTLPSSPTTTKSSPSDPMTTSRANQV--KIIVPNSTAGLIIGKGGATVKAIMEQSGAW 204
Query: 173 IRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
+++ P + +V +SGE +KA+ I ++ ++P
Sbjct: 205 VQL---SQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDP 245
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 86/193 (44%), Gaps = 28/193 (14%)
Query: 129 RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHL-PSCALR 187
R + DG Q K+L+PS G +IGKGGQ + ++ ETGA I++ K + P
Sbjct: 41 RTNTGEDG--QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGT--- 95
Query: 188 SDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIV 247
++ + I G + IA ++ + P +I ++ V P +
Sbjct: 96 TERVCLIQGTIEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTT----VNPDRIKQTL 151
Query: 248 GIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS-SKEFSLRLVCPVANIGGVIGKGGAII 306
+P + S+P D ++ S+ ++++ P + G +IGKGGA +
Sbjct: 152 PSSP-----------------TTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATV 194
Query: 307 NQIRQESGAAIKV 319
I ++SGA +++
Sbjct: 195 KAIMEQSGAWVQL 207
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 39/197 (19%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSS-----TEGDDCLI--TVSS 335
++ L+++ P G +IGKGG I Q+++E+GA IK+ S T CLI T+ +
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 108
Query: 336 KE----FFEDTLS------ATIEAVVRLQPRCSEKIERDSGLI--SFTT----------- 372
F + + A E V LQP+ + +R + S TT
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTT 168
Query: 373 ------RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
+++VP S G +IGKGG+ + + + A +++ K P + + +V +SG
Sbjct: 169 SRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQLSQK---PDGINLQERVVTVSG 225
Query: 427 DLDLAKDALIQVMTRLR 443
+ + + A+ ++ +++
Sbjct: 226 EPEQNRKAVELIIQKIQ 242
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 394 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 453
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 454 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 492
Score = 34.7 bits (78), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSEERVVTVYSASDETN 100
V P +G+I+G+GG+ + + + T ++I+I GE VPG+ R VT+ T
Sbjct: 423 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQ 482
Query: 101 AFE 103
A +
Sbjct: 483 AAQ 485
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 17/159 (10%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
+ P + +G IIGRGGE + +++ ++ KI+I G ER V + + E+
Sbjct: 82 FKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPC-VLTGTPES------- 133
Query: 107 KFVSPAQDALFKVHDRV-IAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNI 165
+ A+ L ++ DR D DS+ Q ++L+P+ ++G VIG+GG+ ++ +
Sbjct: 134 --IEQAKRLLGQIVDRCRNGPGFHNDIDSNSTIQ---EILIPASKVGLVIGRGGETIKQL 188
Query: 166 RSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKA 204
+ TG ++ +++D LP+ A D+ ++I+G+A V++A
Sbjct: 189 QERTGVKMVMIQDGPLPTGA---DKPLRITGDAFKVQQA 224
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 121/290 (41%), Gaps = 57/290 (19%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
T+ L P K+G +IGRGGE +KQL+ T K+ + + P + + +D+
Sbjct: 163 TIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGP--------LPTGADKPLRI 214
Query: 103 EDGDKF-VSPAQDALFKV---HDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKG 158
GD F V A++ + ++ D+ +RGD +S G + ++ VP +G VIG+
Sbjct: 215 -TGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNSRMGGG-SIEVSVPRFAVGIVIGRN 272
Query: 159 GQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSR 218
G++++ I+++ G +I+ D+ + + Q+ G CQ A+
Sbjct: 273 GEMIKKIQNDAGVRIQFKPDD-----GISPERAAQVMGPPD-----RCQHAA-------- 314
Query: 219 SQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDD 278
H+++ I + G A +G GDWS ++
Sbjct: 315 --HIISELILTAQERDGFGGLAAARG---------------RGRGRGDWSVGAPGGVQE- 356
Query: 279 LSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+ P G VIGKGG I I Q+SGA +++ + D
Sbjct: 357 -------ITYTVPADKCGLVIGKGGENIKSINQQSGAHVELQRNPPPNSD 399
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 80/165 (48%), Gaps = 12/165 (7%)
Query: 281 SKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSKEF 338
++EF + P +G +IG+GG I++I+ ESG I++ +SS C++T + E
Sbjct: 79 TEEFKV----PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLT-GTPES 133
Query: 339 FEDTLSATIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRL 398
E + V R R D S +L+P S++G +IG+GG I +++
Sbjct: 134 IEQAKRLLGQIVDRC--RNGPGFHNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQER 191
Query: 399 TKANIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
T + ++ LP A D+ ++I+GD + A V+ +R
Sbjct: 192 TGVKMVMIQDGPLPTGA---DKPLRITGDAFKVQQAREMVLEIIR 233
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/317 (17%), Positives = 123/317 (38%), Gaps = 70/317 (22%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T + VP +G +IG+GG+ + I++E+G +I QI+ E+S
Sbjct: 78 ITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKI-------------------QIASESS 118
Query: 200 VVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGY 259
+ + C + + ++ +++ LL + + G
Sbjct: 119 GIPERPC-VLTGTPESIEQAKRLLGQIVDRCRNGPGF----------------------- 154
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+D+ S ++ P + +G VIG+GG I Q+++ +G + +
Sbjct: 155 ----------------HNDIDSNSTIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVM 198
Query: 320 --DSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIER---DSGLISFTTRL 374
D G D + ++ F + ++R + + + R +S + + +
Sbjct: 199 IQDGPLPTGADKPLRITGDAFKVQQAREMVLEIIREKDQADFRGVRGDFNSRMGGGSIEV 258
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
VP +G +IG+ G +I +++ I+ P + + + Q+ G D + A
Sbjct: 259 SVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGI-----SPERAAQVMGPPDRCQHA 313
Query: 435 LIQVMTRLRANLFDREG 451
+++ L +R+G
Sbjct: 314 A-HIISELILTAQERDG 329
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 43/227 (18%)
Query: 20 DHGPNKRRYTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG 79
+ G KR TG+D F+ + L P GSIIG+GG+ + QL+ +T + I++
Sbjct: 35 EAGSTKRTNTGEDGQYFL--------KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLS 86
Query: 80 ET------VPGSEERVVTVYSASDETNAFED--GDKFVSPAQDALFKVHDRVIAEELRGD 131
+ PG+ ERV + + NA +K Q+ ++ + +
Sbjct: 87 KLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVN 146
Query: 132 ED----------------------SDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSET 169
D + +QV K++VP+ G +IGKGG V+ + ++
Sbjct: 147 PDRIKQTLPSSPTTTKSSPSDPMTTSRANQV--KIIVPNSTAGLIIGKGGATVKAVMEQS 204
Query: 170 GAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
GA +++ P + +V +SGE +KA+ I ++ ++P
Sbjct: 205 GAWVQL---SQKPDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDP 248
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 31/196 (15%)
Query: 129 RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILK----DEHLPSC 184
R + DG Q K+L+PS G +IGKGGQ + ++ ETGA I++ K + P
Sbjct: 41 RTNTGEDG--QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGT 98
Query: 185 ALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAAT 244
++ + I G + IA ++ + P +I ++ V P
Sbjct: 99 ---TERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTT----VNPDRIK 151
Query: 245 PIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLS-SKEFSLRLVCPVANIGGVIGKGG 303
+ +P + S+P D ++ S+ ++++ P + G +IGKGG
Sbjct: 152 QTLPSSP-----------------TTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGG 194
Query: 304 AIINQIRQESGAAIKV 319
A + + ++SGA +++
Sbjct: 195 ATVKAVMEQSGAWVQL 210
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 42/200 (21%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD--------DCLI--T 332
++ L+++ P G +IGKGG I Q+++E+GA IK+ S D CLI T
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGT 108
Query: 333 VSSKE----FFEDTLS------ATIEAVVRLQPRCSEKIERDSGLI--SFTT-------- 372
V + F + + A E V LQP+ + +R + S TT
Sbjct: 109 VEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDP 168
Query: 373 ---------RLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQ 423
+++VP S G +IGKGG+ + + + A +++ K P + + +V
Sbjct: 169 MTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK---PDGINLQERVVT 225
Query: 424 ISGDLDLAKDALIQVMTRLR 443
+SG+ + + A+ ++ +++
Sbjct: 226 VSGEPEQNRKAVELIIQKIQ 245
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 4/102 (3%)
Query: 112 AQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGA 171
A + F + A + G E S G + ++ VP + +G ++GKGG+ + + TGA
Sbjct: 397 ATNGYFGAASPLAASAILGTEKSTDGSKDVVEIAVPENLVGAILGKGGKTLVEYQELTGA 456
Query: 172 QIRILKD-EHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
+I+I K E +P R V I+G + + A I R+
Sbjct: 457 RIQISKKGEFVPGTRNRK---VTITGTPAATQAAQYLITQRI 495
Score = 34.7 bits (78), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 3/63 (4%)
Query: 44 VYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRI---GETVPGSEERVVTVYSASDETN 100
V P +G+I+G+GG+ + + + T ++I+I GE VPG+ R VT+ T
Sbjct: 426 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQ 485
Query: 101 AFE 103
A +
Sbjct: 486 AAQ 488
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 86/185 (46%), Gaps = 19/185 (10%)
Query: 28 YTGDDRDQFIIGPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEE 87
++ +D D P D R LC ++ I+G G + +++ +T ++I I + G E
Sbjct: 52 HSDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPE 111
Query: 88 RVVTVYSASDETNAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVP 147
R+V V D+ V+ A + R + EE G+ED+ +++ LL+P
Sbjct: 112 RIVYVRGTCDD----------VAKAYGMIV----RALLEE-HGNEDNGEDIEISINLLIP 156
Query: 148 SDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQ 207
+GC+IGK G ++ I + A++ ++ L L +D ++ I+G + A
Sbjct: 157 HHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL----LSNDRILTINGVPDAIHIATFY 212
Query: 208 IASRL 212
I+ L
Sbjct: 213 ISQTL 217
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 283 EFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDT 342
+ LR++C V + ++G GA I++I+ E+ A I + ++ + ++ V D
Sbjct: 66 DVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTC---DD 122
Query: 343 LSATIEAVVRLQPRCSEKIERDSGL-ISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
++ +VR E D+G I + LL+P +GC+IGK GS + E+ L+ A
Sbjct: 123 VAKAYGMIVR--ALLEEHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAA 180
Query: 402 NIRILPKENLPKIASEDDEMVQISG 426
+ P + + +D ++ I+G
Sbjct: 181 KLFASPNQ----LLLSNDRILTING 201
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 113/296 (38%), Gaps = 62/296 (20%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP + V + P K G +IG+GGE +KQL+ K+ V +
Sbjct: 178 GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM-------------VMIQDGPQN 224
Query: 99 TNAFED----GDKF-VSPAQDALFK-VHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIG 152
T A + GD + V A++ + + + D+ E+R + S G + +P +G
Sbjct: 225 TGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVG 284
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
VIG+ G++++ I+++ G +I+ D+ D + QI+G CQ A+ +
Sbjct: 285 IVIGRNGEMIKKIQNDAGVRIQFKPDD-----GTTPDRIAQITGPPD-----RCQHAAEI 334
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
+ RS MGP GG +
Sbjct: 335 ITDLLRSVQAGNPGGPGPGGRGRGRGQGNWN---------MGPPGGLQ------------ 373
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
EF+ + P G +IGKGG I I Q+SGA I++ S D
Sbjct: 374 ----------EFNF--IVPTGKTGLIIGKGGETIKSISQQSGARIELQRSPPPNAD 417
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 76/399 (19%), Positives = 154/399 (38%), Gaps = 91/399 (22%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
Y P +G IIGRGGE + +++ ++ KI+I G ER + + + +
Sbjct: 101 YKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAK--- 157
Query: 107 KFVSPAQDALFKVHDRVIAE--ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ D+++ + G DG ++++P+ + G VIGKGG+ ++
Sbjct: 158 -----------RLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQ 206
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
++ G ++ +++D + A D+ ++I+G+ V++A + + D
Sbjct: 207 LQERAGVKMVMIQDGPQNTGA---DKPLRITGDPYKVQQAKEMVLELIRDQ--------- 254
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEF 284
+ GS + GG +G
Sbjct: 255 GGFREVRNEYGSRI------------------GGNEG----------------------- 273
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS--------SK 336
+ + P +G VIG+ G +I +I+ ++G I+ D + ++ +
Sbjct: 274 -IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAA 332
Query: 337 EFFEDTLSAT---------IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGK 387
E D L + R + + + + GL F +VPT + G +IGK
Sbjct: 333 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFN--FIVPTGKTGLIIGK 390
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
GG I + + + A I + + + P A + ++ I G
Sbjct: 391 GGETIKSISQQSGARIEL--QRSPPPNADPNMKLFTIRG 427
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSKEFFEDTLSATI 347
P +G +IG+GG I++I+QESG I++ DS C++T + + ++
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPE---------SV 153
Query: 348 EAVVRLQPRCSEK------IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
++ RL + EK G + +++P S+ G +IGKGG I +++ +A
Sbjct: 154 QSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQE--RA 211
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
++++ ++ P+ D + +I+GD + A V+ +R
Sbjct: 212 GVKMVMIQDGPQNTGADKPL-RITGDPYKVQQAKEMVLELIR 252
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 55.8 bits (133), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 82/400 (20%), Positives = 155/400 (38%), Gaps = 93/400 (23%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
Y P +G IIGRGGE + +++ ++ KI+I G ER + + + +
Sbjct: 105 YKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAK--- 161
Query: 107 KFVSPAQDALFKVHDRVIAE--ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ D+++ + G DG ++++P+ + G VIGKGG+ ++
Sbjct: 162 -----------RLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQ 210
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
++ G ++ +++D + A D+ ++I+G+ V++A + + D
Sbjct: 211 LQERAGVKMVMIQDGPQNTGA---DKPLRITGDPYKVQQAKEMVLELIRDQ--------- 258
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEF 284
+ GS + GG +G
Sbjct: 259 GGFREVRNEYGSRI------------------GGNEG----------------------- 277
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAI--KVDSSSTEGDDCLIT------VSSK 336
+ + P +G VIG+ G +I +I+ ++G I K D +T IT +
Sbjct: 278 -IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPERIAQITGPPDRCQHAA 336
Query: 337 EFFEDTLSATIEAVVRLQPRCSE----------KIERDSGLISFTTRLLVPTSRIGCLIG 386
E D L +++A P + GL F +VPT + G +IG
Sbjct: 337 EIITDLLR-SVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFN--FIVPTGKTGLIIG 393
Query: 387 KGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
KGG I + + + A I + + N P A + ++ I G
Sbjct: 394 KGGETIKSISQQSGARIEL--QRNPPPNADPNMKLFTIRG 431
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/296 (22%), Positives = 113/296 (38%), Gaps = 62/296 (20%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP + V + P K G +IG+GGE +KQL+ K+ V +
Sbjct: 182 GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM-------------VMIQDGPQN 228
Query: 99 TNAFED----GDKF-VSPAQDALFK-VHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIG 152
T A + GD + V A++ + + + D+ E+R + S G + +P +G
Sbjct: 229 TGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVG 288
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
VIG+ G++++ I+++ G +I+ D+ + + QI+G CQ A+ +
Sbjct: 289 IVIGRNGEMIKKIQNDAGVRIQFKPDD-----GTTPERIAQITGPPD-----RCQHAAEI 338
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
+ RS MGP GG
Sbjct: 339 ITDLLRSVQAGNPGGPGPGGRGRGRGQGNWN---------MGPPGGL------------- 376
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+EF+ + P G +IGKGG I I Q+SGA I++ + D
Sbjct: 377 ---------QEFN--FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNAD 421
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSKEFFEDTLSATI 347
P +G +IG+GG I++I+QESG I++ DS C++T + + ++
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPE---------SV 157
Query: 348 EAVVRLQPRCSEK------IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
++ RL + EK G + +++P S+ G +IGKGG I +++ +A
Sbjct: 158 QSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQE--RA 215
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
++++ ++ P+ D + +I+GD + A V+ +R
Sbjct: 216 GVKMVMIQDGPQNTGADKPL-RITGDPYKVQQAKEMVLELIR 256
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 77/399 (19%), Positives = 154/399 (38%), Gaps = 91/399 (22%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
Y P +G IIGRGGE + +++ ++ KI+I G ER + + + +
Sbjct: 100 YKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAK--- 156
Query: 107 KFVSPAQDALFKVHDRVIAE--ELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQN 164
++ D+++ + G DG ++++P+ + G VIGKGG+ ++
Sbjct: 157 -----------RLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQ 205
Query: 165 IRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLA 224
++ G ++ +++D + A D+ ++I+G+ V++A + + D
Sbjct: 206 LQERAGVKMVMIQDGPQNTGA---DKPLRITGDPYKVQQAKEMVLELIRDQ--------- 253
Query: 225 SAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEF 284
+ GS + GG +G
Sbjct: 254 GGFREVRNEYGSRI------------------GGNEG----------------------- 272
Query: 285 SLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVS--------SK 336
+ + P +G VIG+ G +I +I+ ++G I+ D + ++ +
Sbjct: 273 -IDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAA 331
Query: 337 EFFEDTLSAT---------IEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGK 387
E D L + R + + + + GL F +VPT + G +IGK
Sbjct: 332 EIITDLLRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFN--FIVPTGKTGLIIGK 389
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISG 426
GG I + + + A I + + N P A + ++ I G
Sbjct: 390 GGETIKSISQQSGARIEL--QRNPPPNADPNMKLFTIRG 426
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 113/296 (38%), Gaps = 62/296 (20%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GP + V + P K G +IG+GGE +KQL+ K+ V +
Sbjct: 177 GPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM-------------VMIQDGPQN 223
Query: 99 TNAFED----GDKF-VSPAQDALFK-VHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIG 152
T A + GD + V A++ + + + D+ E+R + S G + +P +G
Sbjct: 224 TGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVG 283
Query: 153 CVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRL 212
VIG+ G++++ I+++ G +I+ D+ D + QI+G CQ A+ +
Sbjct: 284 IVIGRNGEMIKKIQNDAGVRIQFKPDD-----GTTPDRIAQITGPPD-----RCQHAAEI 333
Query: 213 HDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSLY 272
+ RS MGP GG
Sbjct: 334 ITDLLRSVQAGNPGGPGPGGRGRGRGQGNWN---------MGPPGGL------------- 371
Query: 273 SAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDD 328
+EF+ + P G +IGKGG I I Q+SGA I++ + D
Sbjct: 372 ---------QEFN--FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNPPPNAD 416
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 80/162 (49%), Gaps = 20/162 (12%)
Query: 290 CPVANIGGVIGKGGAIINQIRQESGAAIKV--DSSSTEGDDCLITVSSKEFFEDTLSATI 347
P +G +IG+GG I++I+QESG I++ DS C++T + + ++
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPE---------SV 152
Query: 348 EAVVRLQPRCSEK------IERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKA 401
++ RL + EK G + +++P S+ G +IGKGG I +++ +A
Sbjct: 153 QSAKRLLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQE--RA 210
Query: 402 NIRILPKENLPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
++++ ++ P+ D + +I+GD + A V+ +R
Sbjct: 211 GVKMVMIQDGPQNTGADKPL-RITGDPYKVQQAKEMVLELIR 251
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 52.8 bits (125), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 26/169 (15%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
Y P +G IIGRGGE + +++ D+ K++I G ER V++ A +
Sbjct: 150 YRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESV------- 202
Query: 107 KFVSPAQDALFKVHDRVIAEELRG------DEDSDGGHQVTAK-LLVPSDQIGCVIGKGG 159
Q A + D I RG ++++GG T + +++P+ + G VIGKGG
Sbjct: 203 ------QKAKMMLDD--IVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGG 254
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
+ ++ ++ G ++ +++D S D+ ++I G+ V++A C++
Sbjct: 255 ETIKQLQERAGVKMILIQDG---SQNTNVDKPLRIIGDPYKVQQA-CEM 299
Score = 46.2 bits (108), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+GD+ G ++ PR ++ +E+ + P +G +IG+GG IN+I+Q+SG +++
Sbjct: 127 QGDSIGSQLGPIHPPPRTSMT-EEYRV----PDGMVGLIIGRGGEQINKIQQDSGCKVQI 181
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVV---RLQPRCSEKIERDSGLISFTTRLLV 376
S + ++++ ++ +V R P + G +++
Sbjct: 182 SPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMI 241
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED---DEMVQISGDLDLAKD 433
P + G +IGKGG I +++ +A ++++ L + S++ D+ ++I GD +
Sbjct: 242 PAGKAGLVIGKGGETIKQLQE--RAGVKMI----LIQDGSQNTNVDKPLRIIGDPYKVQQ 295
Query: 434 ALIQVMTRLR 443
A VM LR
Sbjct: 296 ACEMVMDILR 305
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
G TV + P K G +IG+GGE +KQL+ K+ + + S
Sbjct: 231 GQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKM-------------ILIQDGSQN 277
Query: 99 TNAFED----GDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTA--KLLVPSDQI 151
TN + GD + Q A V D + + G D ++ G +V + VP +
Sbjct: 278 TNVDKPLRIIGDPYK--VQQACEMVMDILRERDQGGFGDRNEYGSRVGGGIDVPVPRHSV 335
Query: 152 GCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
G VIG+ G++++ I+++ G +I+ +D+ +++ I G C+ A+R
Sbjct: 336 GVVIGRSGEMIKKIQNDAGVRIQFKQDD-----GTGPEKIAHIMGPPD-----RCEHAAR 385
Query: 212 LHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+ ++ LL S S G+ P GP GG
Sbjct: 386 IIND------LLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGG------------- 426
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ P G VIG+GG + I Q++GA +++
Sbjct: 427 -------------EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEI 461
Score = 36.2 bits (82), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE-HLPSCALRSDELVQISGEA 198
+T + VP +G +IG+GG+ + I+ ++G +++I D LP + V ++G
Sbjct: 146 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP------ERSVSLTGAP 199
Query: 199 SVVKKA---LCQIASR--------LHDNPSRSQHLLASAISNSHSSSGSLVG 239
V+KA L I SR HDN + Q+ I +G ++G
Sbjct: 200 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIG 251
>sp|Q92945|FUBP2_HUMAN Far upstream element-binding protein 2 OS=Homo sapiens GN=KHSRP
PE=1 SV=4
Length = 711
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 26/169 (15%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
Y P +G IIGRGGE + +++ D+ K++I G ER V++ A +
Sbjct: 149 YRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESV------- 201
Query: 107 KFVSPAQDALFKVHDRVIAEELRG------DEDSDGGHQVTAK-LLVPSDQIGCVIGKGG 159
Q A + D I RG ++++GG T + +++P+ + G VIGKGG
Sbjct: 202 ------QKAKMMLDD--IVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGG 253
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
+ ++ ++ G ++ +++D S D+ ++I G+ V++A C++
Sbjct: 254 ETIKQLQERAGVKMILIQDG---SQNTNVDKPLRIIGDPYKVQQA-CEM 298
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 89/190 (46%), Gaps = 17/190 (8%)
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+GD+ ++ PR ++ +E+ + P +G +IG+GG IN+I+Q+SG +++
Sbjct: 126 QGDSISSQLGPIHPPPRTSMT-EEYRV----PDGMVGLIIGRGGEQINKIQQDSGCKVQI 180
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVV---RLQPRCSEKIERDSGLISFTTRLLV 376
S + ++++ ++ +V R P + G +++
Sbjct: 181 SPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMI 240
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED---DEMVQISGDLDLAKD 433
P + G +IGKGG I +++ +A ++++ L + S++ D+ ++I GD +
Sbjct: 241 PAGKAGLVIGKGGETIKQLQE--RAGVKMI----LIQDGSQNTNVDKPLRIIGDPYKVQQ 294
Query: 434 ALIQVMTRLR 443
A VM LR
Sbjct: 295 ACEMVMDILR 304
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 110/288 (38%), Gaps = 64/288 (22%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
G TV + P K G +IG+GGE +KQL+ K+ + + S
Sbjct: 230 GQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKM-------------ILIQDGSQN 276
Query: 99 TNAFED----GDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTA--KLLVPSDQI 151
TN + GD + Q A V D + + G D ++ G ++ + VP +
Sbjct: 277 TNVDKPLRIIGDPYK--VQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSV 334
Query: 152 GCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
G VIG+ G++++ I+++ G +I+ +D+ +++ I G C+ A+R
Sbjct: 335 GVVIGRSGEMIKKIQNDAGVRIQFKQDD-----GTGPEKIAHIMGPPD-----RCEHAAR 384
Query: 212 LHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+ ++ LL S S G P GP GG
Sbjct: 385 IIND------LLQSLRSGPPGPPGGPGMPPGGRGRGRGQGNWGPPGG------------- 425
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ P G VIG+GG + I Q++GA +++
Sbjct: 426 -------------EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEI 460
Score = 36.2 bits (82), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE-HLPSCALRSDELVQISGEA 198
+T + VP +G +IG+GG+ + I+ ++G +++I D LP + V ++G
Sbjct: 145 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP------ERSVSLTGAP 198
Query: 199 SVVKKA---LCQIASR--------LHDNPSRSQHLLASAISNSHSSSGSLVG 239
V+KA L I SR HDN + Q+ I +G ++G
Sbjct: 199 ESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIG 250
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 84/169 (49%), Gaps = 26/169 (15%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
Y P +G IIGRGGE + +++ D+ K++I G ER V++ A +
Sbjct: 150 YRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGAPESV------- 202
Query: 107 KFVSPAQDALFKVHDRVIAEELRG------DEDSDGGHQVTAK-LLVPSDQIGCVIGKGG 159
Q A + D I RG ++++GG T + +++P+ + G VIGKGG
Sbjct: 203 ------QKAKMMLDD--IVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIGKGG 254
Query: 160 QIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
+ ++ ++ G ++ +++D S D+ ++I G+ V++A C++
Sbjct: 255 ETIKQLQERAGVKMILIQDG---SQNTNVDKPLRIIGDPYKVQQA-CEM 299
Score = 45.8 bits (107), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 260 KGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+GD+ G ++ PR ++ +E+ + P +G +IG+GG IN+I+Q+SG +++
Sbjct: 127 QGDSIGSQLGPIHPPPRTSMT-EEYRV----PDGMVGLIIGRGGEQINKIQQDSGCKVQI 181
Query: 320 DSSSTEGDDCLITVSSKEFFEDTLSATIEAVV---RLQPRCSEKIERDSGLISFTTRLLV 376
S + ++++ ++ +V R P + G +++
Sbjct: 182 SPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMI 241
Query: 377 PTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASED---DEMVQISGDLDLAKD 433
P + G +IGKGG I +++ +A ++++ L + S++ D+ ++I GD +
Sbjct: 242 PAGKAGLVIGKGGETIKQLQE--RAGVKMI----LIQDGSQNTNVDKPLRIIGDPYKVQQ 295
Query: 434 ALIQVMTRLR 443
A VM LR
Sbjct: 296 ACEMVMDILR 305
Score = 42.0 bits (97), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 111/288 (38%), Gaps = 64/288 (22%)
Query: 39 GPEDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
G TV + P K G +IG+GGE +KQL+ K+ + + S
Sbjct: 231 GQNGTVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKM-------------ILIQDGSQN 277
Query: 99 TNAFED----GDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTA--KLLVPSDQI 151
TN + GD + Q A V D + + G D ++ G +V + VP +
Sbjct: 278 TNVDKPLRIIGDPYK--VQQACEMVMDILRERDQGGFGDRNEYGSRVGGGIDVPVPRHSV 335
Query: 152 GCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASR 211
G VIG+ G++++ I+++ G +I+ +D+ +++ I G C+ A+R
Sbjct: 336 GVVIGRSGEMIKKIQNDAGVRIQFKQDD-----GTGPEKIAHIMGPPD-----RCEHAAR 385
Query: 212 LHDNPSRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+ ++ LL S S G+ P GP GG
Sbjct: 386 IIND------LLQSLRSGPPGPPGAPGMPPGGRGRGRGQGNWGPPGG------------- 426
Query: 272 YSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
+ P G VIG+GG + I Q++GA +++
Sbjct: 427 -------------EMTFSIPTHKCGLVIGRGGENVKAINQQTGAFVEI 461
Score = 36.2 bits (82), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEAS 199
+T + VP +G +IG+GG+ + I+ ++G +++I D S L + V ++G
Sbjct: 146 MTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPD----SGGL-PERSVSLTGAPE 200
Query: 200 VVKKA---LCQIASR--------LHDNPSRSQHLLASAISNSHSSSGSLVG 239
V+KA L I SR HDN + Q+ I +G ++G
Sbjct: 201 SVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMIPAGKAGLVIG 251
>sp|Q6CNI6|HEK2_KLULA Heterogeneous nuclear rnp K-like protein 2 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=HEK2 PE=3 SV=1
Length = 383
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 110/296 (37%), Gaps = 64/296 (21%)
Query: 127 ELRGDEDS--DGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSC 184
E+ D +S + G+ +T +LV + +IG G ++ IR E +I I E SC
Sbjct: 44 EINNDTNSQVNNGNNITFHVLVSLKEAAKIIGPQGNTIETIRRENDIKIGISPREK--SC 101
Query: 185 ALRSDELVQISGEASVVKKALCQIASRLHDNPSRSQHLLASAISNSHSSSGSLVGPTAAT 244
SD L+ +SG V +L Q+ L + +H+
Sbjct: 102 ---SDRLLNVSGPPRQVANSLGQVLRVLTTDYEPEEHVFKH------------------- 139
Query: 245 PIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGA 304
+ ++ P + + W + +LRL+C I VIG+ GA
Sbjct: 140 ----LRFMLPPASKEEIEDPEKWKQI-------------GNLRLICTNPQISSVIGQQGA 182
Query: 305 IINQIRQESGA---------------AIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEA 349
I ++ + +++ T +C+ ++ + F +D +
Sbjct: 183 KIKKLIETHTVKLVASKHFLPDSKDRVLEIQGFPTSVANCINEIA-ELFIQDDVHVPPRT 241
Query: 350 VVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
+ R P E I + L +P +G L+G GG+ I +R+ TK I I
Sbjct: 242 LPRYYPHSKHTKE-----IQVSQTLAIPKEFVGALLGVGGNRIANLRKFTKTKIVI 292
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIG--ETVPGSEERVVTVY----SASDET 99
R +C +I S+IG+ G +K+L I+T + + +P S++RV+ + S ++
Sbjct: 165 RLICTNPQISSVIGQQGAKIKKL-IETHTVKLVASKHFLPDSKDRVLEIQGFPTSVANCI 223
Query: 100 NA----FEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCVI 155
N F D V P + H + E QV+ L +P + +G ++
Sbjct: 224 NEIAELFIQDDVHVPPRTLPRYYPHSKHTKEI-----------QVSQTLAIPKEFVGALL 272
Query: 156 GKGGQIVQNIRSETGAQIRILKD 178
G GG + N+R T +I I +D
Sbjct: 273 GVGGNRIANLRKFTKTKIVIGQD 295
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 173/420 (41%), Gaps = 49/420 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDET---- 99
R L + G++IG+GG+ +K LR D + + +VP S ER++++ SA ET
Sbjct: 46 RILLQSKNAGAVIGKGGKNIKALRTDYNASV----SVPDSSGPERILSI-SADIETIGEI 100
Query: 100 -----NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
E+G + SP + + + E L +LL+ G +
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAV-ECLNYQHYKGSDFDCELRLLIHQSLAGGI 159
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IG G ++ +R T I++ ++ C +D +V I G+ V + + I + +
Sbjct: 160 IGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRVVECIKIILDLISE 215
Query: 215 NP--SRSQHLLASAISNSHSSSG-SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+P R+Q + ++ G +++ VG P+ G GG+ G R +
Sbjct: 216 SPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGF-PMRG-RGGFDRMPPGRGGRPM 273
Query: 272 YSAPR--DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-- 327
+ R DD+S + GG + + G + D GD
Sbjct: 274 PPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRY 333
Query: 328 DCLITVSSKEFFE---DTLSATIEAVVRLQPRCSEKIER----------DSGLISFTTRL 374
D ++ S+ E ++ DT S + E + +P+ + D G TT++
Sbjct: 334 DGMVGFSADETWDSAIDTWSPS-EWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQV 392
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+P G +IGKGG I ++R + A+I+I + P SE D ++ I+G D ++A
Sbjct: 393 TIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSE-DRIITITGTQDQIQNA 447
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK-----EFFE 340
LR++ N G VIGKGG I +R + A++ V SS G + ++++S+ E +
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSS--GPERILSISADIETIGEILK 102
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT-------------RLLVPTSRIGCLIGK 387
+ E + P + ++ +S + RLL+ S G +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
G+ I E+R T+ I++ +E P D +V I G D
Sbjct: 163 KGAKIKELRENTQTTIKLF-QECCPHST---DRVVLIGGKPD 200
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 173/420 (41%), Gaps = 49/420 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDET---- 99
R L + G++IG+GG+ +K LR D + + +VP S ER++++ SA ET
Sbjct: 46 RILLQSKNAGAVIGKGGKNIKALRTDYNASV----SVPDSSGPERILSI-SADIETIGEI 100
Query: 100 -----NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
E+G + SP + + + E L +LL+ G +
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAV-ECLNYQHYKGSDFDCELRLLIHQSLAGGI 159
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IG G ++ +R T I++ ++ C +D +V I G+ V + + I + +
Sbjct: 160 IGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRVVECIKIILDLISE 215
Query: 215 NP--SRSQHLLASAISNSHSSSG-SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+P R+Q + ++ G +++ VG P+ G GG+ G R +
Sbjct: 216 SPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGF-PMRG-RGGFDRMPPGRGGRPM 273
Query: 272 YSAPR--DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-- 327
+ R DD+S + GG + + G + D GD
Sbjct: 274 PPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRY 333
Query: 328 DCLITVSSKEFFE---DTLSATIEAVVRLQPRCSEKIER----------DSGLISFTTRL 374
D ++ S+ E ++ DT S + E + +P+ + D G TT++
Sbjct: 334 DGMVGFSADETWDSAIDTWSPS-EWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQV 392
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+P G +IGKGG I ++R + A+I+I + P SE D ++ I+G D ++A
Sbjct: 393 TIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSE-DRIITITGTQDQIQNA 447
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK-----EFFE 340
LR++ N G VIGKGG I +R + A++ V SS G + ++++S+ E +
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSS--GPERILSISADIETIGEILK 102
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT-------------RLLVPTSRIGCLIGK 387
+ E + P + ++ +S + RLL+ S G +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
G+ I E+R T+ I++ +E P D +V I G D
Sbjct: 163 KGAKIKELRENTQTTIKLF-QECCPHST---DRVVLIGGKPD 200
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 173/420 (41%), Gaps = 49/420 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDET---- 99
R L + G++IG+GG+ +K LR D + + +VP S ER++++ SA ET
Sbjct: 46 RILLQSKNAGAVIGKGGKNIKALRTDYNASV----SVPDSSGPERILSI-SADIETIGEI 100
Query: 100 -----NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
E+G + SP + + + E L +LL+ G +
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAV-ECLNYQHYKGSDFDCELRLLIHQSLAGGI 159
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IG G ++ +R T I++ ++ C +D +V I G+ V + + I + +
Sbjct: 160 IGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRVVECIKIILDLISE 215
Query: 215 NP--SRSQHLLASAISNSHSSSG-SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+P R+Q + ++ G +++ VG P+ G GG+ G R +
Sbjct: 216 SPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGF-PMRG-RGGFDRMPPGRGGRPM 273
Query: 272 YSAPR--DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-- 327
+ R DD+S + GG + + G + D GD
Sbjct: 274 PPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRY 333
Query: 328 DCLITVSSKEFFE---DTLSATIEAVVRLQPRCSEKIER----------DSGLISFTTRL 374
D ++ S+ E ++ DT S + E + +P+ + D G TT++
Sbjct: 334 DGMVGFSADETWDSAIDTWSPS-EWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQV 392
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+P G +IGKGG I ++R + A+I+I + P SE D ++ I+G D ++A
Sbjct: 393 TIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSE-DRIITITGTQDQIQNA 447
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK-----EFFE 340
LR++ N G VIGKGG I +R + A++ V SS G + ++++S+ E +
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSS--GPERILSISADIETIGEILK 102
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT-------------RLLVPTSRIGCLIGK 387
+ E + P + ++ +S + RLL+ S G +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
G+ I E+R T+ I++ +E P D +V I G D
Sbjct: 163 KGAKIKELRENTQTTIKLF-QECCPHST---DRVVLIGGKPD 200
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 180/434 (41%), Gaps = 51/434 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDET---- 99
R L + G++IG+GG+ +K LR D + + +VP S ER++++ SA ET
Sbjct: 46 RILLQSKNAGAVIGKGGKNIKALRTDYNASV----SVPDSSGPERILSI-SADIETIGEI 100
Query: 100 -----NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
E+G + SP + + + E L +LL+ G +
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAV-ECLNYQHYKGSDFDCELRLLIHQSLAGGI 159
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IG G ++ +R T I++ ++ C +D +V I G+ V + + I + +
Sbjct: 160 IGVKGAKIKELRENTQTTIKLFQE----CCPQSTDRVVLIGGKPDRVVECIKIILDLISE 215
Query: 215 NP--SRSQHLLASAISNSHSSSG-SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+P R+Q + ++ G +++ VG P+ G GG+ G R +
Sbjct: 216 SPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGF-PMRG-RGGFDRMPPGRGGRPM 273
Query: 272 YSAPR--DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-- 327
+ R DD+S + GG + + G + D GD
Sbjct: 274 PPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRY 333
Query: 328 DCLITVSSKEFFE---DTLSATIEAVVRLQPRCSEKIER----------DSGLISFTTRL 374
D ++ S+ E ++ DT S + E + +P+ + D G TT++
Sbjct: 334 DGMVGFSADETWDSAIDTWSPS-EWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQV 392
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+P G +IGKGG I ++R + A+I+I + P SE D ++ I+G D ++A
Sbjct: 393 TIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSE-DRIITITGTQDQIQNA 447
Query: 435 --LIQVMTRLRANL 446
L+Q + A++
Sbjct: 448 QYLLQNSVKQYADV 461
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 24/162 (14%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK-----EFFE 340
LR++ N G VIGKGG I +R + A++ V SS G + ++++S+ E +
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSS--GPERILSISADIETIGEILK 102
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT-------------RLLVPTSRIGCLIGK 387
+ E + P + ++ +S + RLL+ S G +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
G+ I E+R T+ I++ +E P+ D +V I G D
Sbjct: 163 KGAKIKELRENTQTTIKLF-QECCPQST---DRVVLIGGKPD 200
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 180/434 (41%), Gaps = 51/434 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDET---- 99
R L + G++IG+GG+ +K LR D + + +VP S ER++++ SA ET
Sbjct: 46 RILLQSKNAGAVIGKGGKNIKALRTDYNASV----SVPDSSGPERILSI-SADIETIGEI 100
Query: 100 -----NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
E+G + SP + + + E L +LL+ G +
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAV-ECLNYQHYKGSDFDCELRLLIHQSLAGGI 159
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IG G ++ +R T I++ ++ C +D +V I G+ V + + I + +
Sbjct: 160 IGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRVVECIKIILDLISE 215
Query: 215 NP--SRSQHLLASAISNSHSSSG-SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+P R+Q + ++ G +++ VG P+ G GG+ G R +
Sbjct: 216 SPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGF-PMRG-RGGFDRMPPGRGGRPM 273
Query: 272 YSAPR--DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-- 327
+ R DD+S + GG + + G + D GD
Sbjct: 274 PPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRY 333
Query: 328 DCLITVSSKEFFE---DTLSATIEAVVRLQPRCSEKIER----------DSGLISFTTRL 374
D ++ S+ E ++ DT S + E + +P+ + D G TT++
Sbjct: 334 DGMVGFSADETWDSAIDTWSPS-EWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQV 392
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+P G +IGKGG I ++R + A+I+I + P SE D ++ I+G D ++A
Sbjct: 393 TIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSE-DRIITITGTQDQIQNA 447
Query: 435 --LIQVMTRLRANL 446
L+Q + A++
Sbjct: 448 QYLLQNSVKQYADV 461
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK-----EFFE 340
LR++ N G VIGKGG I +R + A++ V SS G + ++++S+ E +
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSS--GPERILSISADIETIGEILK 102
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT-------------RLLVPTSRIGCLIGK 387
+ E + P + ++ +S + RLL+ S G +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
G+ I E+R T+ I++ +E P D +V I G D
Sbjct: 163 KGAKIKELRENTQTTIKLF-QECCPHST---DRVVLIGGKPD 200
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 99/434 (22%), Positives = 180/434 (41%), Gaps = 51/434 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDET---- 99
R L + G++IG+GG+ +K LR D + + +VP S ER++++ SA ET
Sbjct: 46 RILLQSKNAGAVIGKGGKNIKALRTDYNASV----SVPDSSGPERILSI-SADIETIGEI 100
Query: 100 -----NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
E+G + SP + + + E L +LL+ G +
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAV-ECLNYQHYKGSDFDCELRLLIHQSLAGGI 159
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IG G ++ +R T I++ ++ C +D +V I G+ V + + I + +
Sbjct: 160 IGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRVVECIKIILDLISE 215
Query: 215 NP--SRSQHLLASAISNSHSSSG-SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+P R+Q + ++ G +++ VG P+ G GG+ G R +
Sbjct: 216 SPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGF-PMRG-RGGFDRMPPGRGGRPM 273
Query: 272 YSAPR--DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-- 327
+ R DD+S + GG + + G + D GD
Sbjct: 274 PPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRY 333
Query: 328 DCLITVSSKEFFE---DTLSATIEAVVRLQPRCSEKIER----------DSGLISFTTRL 374
D ++ S+ E ++ DT S + E + +P+ + D G TT++
Sbjct: 334 DGMVGFSADETWDSAIDTWSPS-EWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQV 392
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+P G +IGKGG I ++R + A+I+I + P SE D ++ I+G D ++A
Sbjct: 393 TIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSE-DRIITITGTQDQIQNA 447
Query: 435 --LIQVMTRLRANL 446
L+Q + A++
Sbjct: 448 QYLLQNSVKQYADV 461
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK-----EFFE 340
LR++ N G VIGKGG I +R + A++ V SS G + ++++S+ E +
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSS--GPERILSISADIETIGEILK 102
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT-------------RLLVPTSRIGCLIGK 387
+ E + P + ++ +S + RLL+ S G +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
G+ I E+R T+ I++ +E P D +V I G D
Sbjct: 163 KGAKIKELRENTQTTIKLF-QECCPHST---DRVVLIGGKPD 200
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 96/420 (22%), Positives = 173/420 (41%), Gaps = 49/420 (11%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDET---- 99
R L + G++IG+GG+ +K LR D + + +VP S ER++++ SA ET
Sbjct: 46 RILLQSKNAGAVIGKGGKNIKALRTDYNASV----SVPDSSGPERILSI-SADIETIGEI 100
Query: 100 -----NAFEDGDKFVSPAQDALFKVHDRVIAEELRGDEDSDGGHQVTAKLLVPSDQIGCV 154
E+G + SP + + + E L +LL+ G +
Sbjct: 101 LKKIIPTLEEGLQLPSPTATSQLPLESDAV-ECLNYQHFKGSDFDCELRLLIHQSLAGGI 159
Query: 155 IGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD 214
IG G ++ +R T I++ ++ C +D +V I G+ V + + I + +
Sbjct: 160 IGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRVVECIKIILDLISE 215
Query: 215 NP--SRSQHLLASAISNSHSSSG-SLVGPTAATPIVGIAPLMGPYGGYKGDTAGDWSRSL 271
+P R+Q + ++ G +++ VG P+ G GG+ G R +
Sbjct: 216 SPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGF-PMRG-RGGFDRMPPGRGGRPM 273
Query: 272 YSAPR--DDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGD-- 327
+ R DD+S + GG + + G + D GD
Sbjct: 274 PPSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRY 333
Query: 328 DCLITVSSKEFFE---DTLSATIEAVVRLQPRCSEKIER----------DSGLISFTTRL 374
D ++ S+ E ++ DT S + E + +P+ + D G TT++
Sbjct: 334 DGMVGFSADETWDSAIDTWSPS-EWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQV 392
Query: 375 LVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLDLAKDA 434
+P G +IGKGG I ++R + A+I+I + P SE D ++ I+G D ++A
Sbjct: 393 TIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSE-DRIITITGTQDQIQNA 447
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 71/162 (43%), Gaps = 24/162 (14%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSK-----EFFE 340
LR++ N G VIGKGG I +R + A++ V SS G + ++++S+ E +
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSS--GPERILSISADIETIGEILK 102
Query: 341 DTLSATIEAVVRLQPRCSEKIERDSGLISFTT-------------RLLVPTSRIGCLIGK 387
+ E + P + ++ +S + RLL+ S G +IG
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDFDCELRLLIHQSLAGGIIGV 162
Query: 388 GGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
G+ I E+R T+ I++ +E P D +V I G D
Sbjct: 163 KGAKIKELRENTQTTIKLF-QECCPHST---DRVVLIGGKPD 200
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 48.9 bits (115), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 117/295 (39%), Gaps = 46/295 (15%)
Query: 41 EDTVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETN 100
+ R L R+ G IIG+ G+ V +LR T K + + VP +RV+T+
Sbjct: 92 QQLTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISG------ 145
Query: 101 AFEDGDKFVSPAQDAL--FKVHDRVIAEELRGDE--DSDGGHQVTAKLLVPSDQIGCVIG 156
P ++ + ++ + A+ + SD +LL+ +G +IG
Sbjct: 146 ----------PLENVVRAYRFIIDIFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIG 195
Query: 157 KGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHD-- 214
+ G ++ I+ + ++ KD LP R+ V+I G + A+ +I L D
Sbjct: 196 RNGLRIKLIQDKCSCRMIASKD-MLPQSTERT---VEIHGTVDNLHAAIWEIGKCLIDDW 251
Query: 215 ---------NP-SRSQHLLASAISNSHSSSGSLVGPTAATPIVGIAPLMGPYGGYKGDTA 264
NP SR L S S ++S V P AA + + Y
Sbjct: 252 ERGAGTVFYNPVSRLTQPLPSLAS---TASPQQVSPPAAPSTTSGEAIPENFVSYGAQVF 308
Query: 265 GDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQESGAAIKV 319
P+ + + P +G +IG+GG+ I++IR+ SG+ I +
Sbjct: 309 PATQMPFLQQPK-------VTQNISIPADMVGCIIGRGGSKISEIRRTSGSKISI 356
Score = 46.6 bits (109), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 139 QVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEA 198
+VT + +P+D +GC+IG+GG + IR +G++I I K+ H + + + I+G
Sbjct: 320 KVTQNISIPADMVGCIIGRGGSKISEIRRTSGSKISIAKEPHDET----GERMFTITGTH 375
Query: 199 SVVKKALCQIASRLHDNPSRSQH 221
+KAL + +L R H
Sbjct: 376 EENEKALFLLYQQLEMEKDRRSH 398
Score = 36.2 bits (82), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 371 TTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
T + +P +GC+IG+GGS I+E+RR + + I I
Sbjct: 322 TQNISIPADMVGCIIGRGGSKISEIRRTSGSKISI 356
>sp|Q8UVD9|FUBP2_CHICK Far upstream element-binding protein 2 OS=Gallus gallus GN=KHSRP
PE=1 SV=1
Length = 769
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 81/168 (48%), Gaps = 25/168 (14%)
Query: 47 YLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAFEDGD 106
Y P +G IIGRGGE + +++ D+ K++I G ER V++ + +
Sbjct: 213 YRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLPERSVSLTGSPEAV------- 265
Query: 107 KFVSPAQDALFKVHDRVIAEELRG------DEDSDGGHQVTAKLLVPSDQIGCVIGKGGQ 160
Q A + D I RG + ++G + ++++P+ + G VIGKGG+
Sbjct: 266 ------QKAKLMLDD--IVSRGRGGPPGQFHDYANGQNGTVQEIMIPAGKAGLVIGKGGE 317
Query: 161 IVQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQI 208
++ ++ G ++ ++D S D+ ++I G+ V++A C++
Sbjct: 318 TIKQLQERAGVKMIFIQDG---SQNTNVDKPLRIIGDPYKVQQA-CEM 361
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 94/213 (44%), Gaps = 44/213 (20%)
Query: 243 ATPIVGIAPLMGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKG 302
A P + P +GP ++ PR ++E+ + P +G +IG+G
Sbjct: 187 ALPSAALPPQLGP---------------MHPPPRSTTVTEEYRV----PDGMVGLIIGRG 227
Query: 303 GAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSATIEAVVRLQPRCSEKIE 362
G IN+I+Q+SG +++ S G +VS L+ + EAV + + + +
Sbjct: 228 GEQINKIQQDSGCKVQISPDS--GGLPERSVS--------LTGSPEAVQKAKLMLDDIVS 277
Query: 363 RD------------SGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKEN 410
R +G +++P + G +IGKGG I +++ +A ++++ ++
Sbjct: 278 RGRGGPPGQFHDYANGQNGTVQEIMIPAGKAGLVIGKGGETIKQLQE--RAGVKMIFIQD 335
Query: 411 LPKIASEDDEMVQISGDLDLAKDALIQVMTRLR 443
+ + D+ ++I GD + A VM LR
Sbjct: 336 GSQ-NTNVDKPLRIIGDPYKVQQACEMVMDILR 367
Score = 40.0 bits (92), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 22/144 (15%)
Query: 43 TVYRYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDETNAF 102
TV + P K G +IG+GGE +KQL+ K+ + + S TN
Sbjct: 297 TVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKM-------------IFIQDGSQNTNVD 343
Query: 103 ED----GDKFVSPAQDALFKVHDRVIAEELRGDED-SDGGHQVTA--KLLVPSDQIGCVI 155
+ GD + Q A V D + + G D ++ G ++ + VP +G VI
Sbjct: 344 KPLRIIGDPYK--VQQACEMVMDILRERDQGGFGDRNEYGSRIGGGIDVPVPRHSVGVVI 401
Query: 156 GKGGQIVQNIRSETGAQIRILKDE 179
G+ G++++ I+++ G +I+ +D+
Sbjct: 402 GRSGEMIKKIQNDAGVRIQFKQDD 425
Score = 36.2 bits (82), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 10/90 (11%)
Query: 140 VTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDE-HLPSCALRSDELVQISGEA 198
VT + VP +G +IG+GG+ + I+ ++G +++I D LP + V ++G
Sbjct: 209 VTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP------ERSVSLTGSP 262
Query: 199 SVVKKA---LCQIASRLHDNPSRSQHLLAS 225
V+KA L I SR P H A+
Sbjct: 263 EAVQKAKLMLDDIVSRGRGGPPGQFHDYAN 292
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 129 RGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQIVQNIRSETGAQIRILKDEHLPSCALRS 188
RG GG +T ++ +P D G +IGKGGQ ++ IR E+GA I+I DE L
Sbjct: 341 RGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI--DEPLEGS---E 395
Query: 189 DELVQISGEASVVKKA 204
D ++ I+G ++ A
Sbjct: 396 DRIITITGTQDQIQNA 411
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 286 LRLVCPVANIGGVIGKGGAIINQIRQESGAAIKVDSSSTEGDDCLITVSSKEFFEDTLSA 345
LR++ N G VIGKGG I +R + A++ V SS G + ++++S+ +T+
Sbjct: 42 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSS--GPERILSISAD---TETIGE 96
Query: 346 TIEAVVRLQPRCSEKIERDSGLISFTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRI 405
++ ++ P E RLL+ S G +IG G+ I E+R T+ I++
Sbjct: 97 ILKKII---PTLEEYQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL 153
Query: 406 LPKENLPKIASEDDEMVQISGDLD 429
+E P D +V I G D
Sbjct: 154 F-QECCPHST---DRVVLIGGKPD 173
Score = 46.2 bits (108), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%)
Query: 253 MGPYGGYKGDTAGDWSRSLYSAPRDDLSSKEFSLRLVCPVANIGGVIGKGGAIINQIRQE 312
M P ++G + D+S + DL + ++ P G +IGKGG I QIR E
Sbjct: 321 MQPPELFEGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHE 380
Query: 313 SGAAIKVDSSSTEGDDCLITVS 334
SGA+IK+D +D +IT++
Sbjct: 381 SGASIKIDEPLEGSEDRIITIT 402
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 33/44 (75%)
Query: 55 GSIIGRGGEIVKQLRIDTKSKIRIGETVPGSEERVVTVYSASDE 98
GSIIG+GG+ +KQ+R ++ + I+I E + GSE+R++T+ D+
Sbjct: 364 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQDQ 407
Score = 39.7 bits (91), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 80/175 (45%), Gaps = 31/175 (17%)
Query: 46 RYLCPIRKIGSIIGRGGEIVKQLRIDTKSKIRIGETVPGSE--ERVVTVYSASDETNAFE 103
R L + G++IG+GG+ +K LR D + + +VP S ER++++ SA ET
Sbjct: 43 RILLQSKNAGAVIGKGGKNIKALRTDYNASV----SVPDSSGPERILSI-SADTET---- 93
Query: 104 DGDKFVSPAQDALFKVHDRVIA--EELRGDEDSDGGHQVTAKLLVPSDQIGCVIGKGGQI 161
+ ++ ++I EE + + SD +LL+ G +IG G
Sbjct: 94 ------------IGEILKKIIPTLEEYQHYKGSD--FDCELRLLIHQSLAGGIIGVKGAK 139
Query: 162 VQNIRSETGAQIRILKDEHLPSCALRSDELVQISGEASVVKKALCQIASRLHDNP 216
++ +R T I++ ++ C +D +V I G+ V + + I + ++P
Sbjct: 140 IKELRENTQTTIKLFQE----CCPHSTDRVVLIGGKPDRVVECIKIILDLISESP 190
Score = 33.9 bits (76), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Query: 370 FTTRLLVPTSRIGCLIGKGGSIITEMRRLTKANIRILPKENLPKIASEDDEMVQISGDLD 429
TT++ +P G +IGKGG I ++R + A+I+I + P SE D ++ I+G D
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI----DEPLEGSE-DRIITITGTQD 406
Query: 430 LAKDA 434
++A
Sbjct: 407 QIQNA 411
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 215,145,609
Number of Sequences: 539616
Number of extensions: 9748187
Number of successful extensions: 30671
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 402
Number of HSP's successfully gapped in prelim test: 399
Number of HSP's that attempted gapping in prelim test: 25176
Number of HSP's gapped (non-prelim): 4841
length of query: 546
length of database: 191,569,459
effective HSP length: 122
effective length of query: 424
effective length of database: 125,736,307
effective search space: 53312194168
effective search space used: 53312194168
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)