BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009011
(546 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/524 (63%), Positives = 413/524 (78%), Gaps = 6/524 (1%)
Query: 25 LCYLSCNPLCTTAESPSSTESPSLPSWIKFFDSQSP-----DEDFVIPSLAGWVESHRLN 79
L YLS NP CTT SP++ ESP LP W+KF + +P D+DFVIP LA W E+ + +
Sbjct: 12 LHYLSLNPFCTTTGSPTTAESPELPDWVKFSQNNNPAGSDSDDDFVIPKLAYWAENQKHD 71
Query: 80 EKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSN 139
+S++ VL E ++D+DKIS++L ++ S D VV+AL GCGVSVS SLVEQ L+RFSN
Sbjct: 72 HRSKVDGYVLKETIDSDIDKISELLKFRHSSADAVVQALGGCGVSVSESLVEQVLKRFSN 131
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
D PAFGFF WAK QTGY H+ YN+MVD+LGK KKF LMWELV+EMD L GYVSLAT
Sbjct: 132 DWIPAFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLG-GYVSLAT 190
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
M+ +MRRL R R+ DA+EAFRGM+++GV+KDT A++ LMD LVK NSVEHA VF+EFK
Sbjct: 191 MTKVMRRLARASRWKDAIEAFRGMERFGVKKDTLAMNTLMDALVKENSVEHANDVFVEFK 250
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
D I L+ FN+LIHGWCK RK+D+A K+M EM + GF PDV+SYT +E YCREKDFRK
Sbjct: 251 DSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRK 310
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
V+ L EM+EKGC P+V+TYTIVMHALGK K+I++AL+VYEKMK C+PDTSFYSSLI+
Sbjct: 311 VNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIY 370
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
ILSKAGR+KDA ++FEDM KQG +P+VLTYNTMIS+AC S+EE+ALKLL KMEE CKP
Sbjct: 371 ILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKP 430
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY+PLLKMCCR RMKVL+ LL HMFKND+S++ GTY+ LV GL +SGKLE AC FF
Sbjct: 431 DLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHACLFF 490
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
EEM+SKG+VP T+K+L ++LEKK + AKER+ KL++ A++Q
Sbjct: 491 EEMVSKGLVPKDCTHKLLLKELEKKSMVEAKERVEKLMSQARQQ 534
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 674 bits (1739), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/515 (62%), Positives = 396/515 (76%), Gaps = 4/515 (0%)
Query: 32 PLCT--TAESPSSTESPSLPSWIKFFD-SQSPDEDFVIPSLAGWVESHRLNEKSRISSRV 88
PL T +A+SP S ESP LP+W+ + PD DFVIPSLA WVE H L + + + +
Sbjct: 33 PLTTPHSADSPDSPESPDLPTWLHSNKKPEFPDGDFVIPSLADWVEHHNLGDIKEVGNHL 92
Query: 89 LSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFF 148
L +D+D++S+IL K Y D VV+AL CGV+ +N+L+ Q L RF ND PA G F
Sbjct: 93 LFHAQVSDIDRVSEILKKHYPCTDSVVQALNDCGVNPTNNLISQLLNRFCNDWVPALGLF 152
Query: 149 TWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLV 208
TWAK QTGY+H P++Y+ MVD+LG+ KKF MWELVKEM+ L GYVSL TM +MRRL
Sbjct: 153 TWAKHQTGYVHPPDLYDLMVDILGRRKKFSFMWELVKEMENLE-GYVSLVTMKKVMRRLA 211
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
R G + DAVEAFRG++K GV KD AL+VLMD LVK SVEHAY F+EFKD I + Q
Sbjct: 212 RAGNFQDAVEAFRGIEKLGVRKDIEALNVLMDALVKEGSVEHAYSAFMEFKDSIHVDFQS 271
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FNIL+HG+CK RK+DDA+K M EM +QGF P+VVSYTCFIE YC+ KDFR V+ EMQ
Sbjct: 272 FNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRNVEAIFSEMQ 331
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
EK CKP+VITYTI MHALGKAKQ+N+AL+VYE MKS+ C+PD SFYSSLIF+L+++GR+K
Sbjct: 332 EKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIFVLTQSGRLK 391
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
DA ++FEDMKKQGV P++LTYNTMI+SAC EEENALKLL++MEED CKPD +TYAPLL
Sbjct: 392 DAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKPDIQTYAPLL 451
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
KMCCRKKR+KVL FLL HMFKN++S+D GTY LV GL +SGKLELACSFFEEM+ KG++
Sbjct: 452 KMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFFEEMVMKGLI 511
Query: 509 PYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
P TYKML E+LE+ L AKE+I KL+ ++Q
Sbjct: 512 PRDRTYKMLVEELEQNNLTEAKEKIQKLMFQTEDQ 546
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 633 bits (1632), Expect = e-179, Method: Compositional matrix adjust.
Identities = 313/523 (59%), Positives = 383/523 (73%), Gaps = 7/523 (1%)
Query: 29 SCNPLCTTAESPSSTESPSLPSWIKFFDS------QSPDEDFVIPSLAGWVESHRLNEKS 82
S PLCT S +ESP LP WIKFFD+ +S D+ FVIP LA W+ES +L + +
Sbjct: 69 SPKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESEDDVFVIPPLAHWLESQKLEDNN 128
Query: 83 RISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLT 142
++ + L E +VDKIS +L +Y SP+ V EAL G VSN+LV Q L+RF ND
Sbjct: 129 KVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWI 188
Query: 143 PAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST 202
A+G F WAK Q Y H+PE YN+MVD+LGK+K F LMWELV EM+ L G VSL TMS
Sbjct: 189 QAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLA-GSVSLETMSK 247
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
++RRL R GR+ +A+ AFR ++KYG+ DT A++VLMD LVK SVE A+ VF E K I
Sbjct: 248 VIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSI 307
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P + FN+LIHG+CK +K+D+A K M E+ + G PDV+SYT FIE +CREKDFR VD
Sbjct: 308 PFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDK 367
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L +M+ KGCKP+VIT+TI+MHALGKAKQINEALKVYEKMK + C+PD+SFYSSLIFIL
Sbjct: 368 VLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILG 427
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
KAGR+ D EI EDM+KQGV P+VLTYNT+IS ACA S+EE AL LL KMEE CKPD +
Sbjct: 428 KAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLK 487
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY PLLKM CRKKRMKVL FLL HMFKNDVS++AGTYA LVRGL E+GKL LACSFF EM
Sbjct: 488 TYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEM 547
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKT 545
+SK +VP ST+KML+E+LE+K + + I L+ A Q T
Sbjct: 548 LSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLMFCATNQDT 590
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 631 bits (1628), Expect = e-178, Method: Compositional matrix adjust.
Identities = 313/523 (59%), Positives = 383/523 (73%), Gaps = 7/523 (1%)
Query: 29 SCNPLCTTAESPSSTESPSLPSWIKFFDS------QSPDEDFVIPSLAGWVESHRLNEKS 82
S PLCT S +ESP LP WIKFFD+ +S D+ FVIP LA W+ES +L + +
Sbjct: 92 SPKPLCTITGSTEVSESPDLPDWIKFFDTKTSTHLESEDDVFVIPPLAHWLESQKLEDNN 151
Query: 83 RISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLT 142
++ + L E +VDKIS +L +Y SP+ V EAL G VSN+LV Q L+RF ND
Sbjct: 152 KVVQKKLGETCNNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWI 211
Query: 143 PAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST 202
A+G F WAK Q Y H+PE YN+MVD+LGK+K F LMWELV EM+ L G VSL TMS
Sbjct: 212 QAYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLA-GSVSLETMSK 270
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
++RRL R GR+ +A+ AFR ++KYG+ DT A++VLMD LVK SVE A+ VF E K I
Sbjct: 271 VIRRLARAGRHQEAIHAFRNIEKYGISTDTTAMNVLMDALVKEASVEDAHNVFRELKCSI 330
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P + FN+LIHG+CK +K+D+A K M E+ + G PDV+SYT FIE +CREKDFR VD
Sbjct: 331 PFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRNVDK 390
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L +M+ KGCKP+VIT+TI+MHALGKAKQINEALKVYEKMK + C+PD+SFYSSLIFIL
Sbjct: 391 VLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIFILG 450
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
KAGR+ D EI EDM+KQGV P+VLTYNT+IS ACA S+EE AL LL KMEE CKPD +
Sbjct: 451 KAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKPDLK 510
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY PLLKM CRKKRMKVL FLL HMFKNDVS++AGTYA LVRGL E+GKL LACSFF EM
Sbjct: 511 TYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFFGEM 570
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKT 545
+SK +VP ST+KML+E+LE+K + + I L+ A Q T
Sbjct: 571 LSKAMVPKDSTFKMLKEELERKSMLEEMKIIENLMFCATNQDT 613
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 594 bits (1532), Expect = e-167, Method: Compositional matrix adjust.
Identities = 289/498 (58%), Positives = 364/498 (73%), Gaps = 5/498 (1%)
Query: 44 ESPSLPSWIKFFDSQSP----DEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDK 99
ESP LP+W+ +Q P D DFVIPSLA WVE+ L + S +L E ++ DK
Sbjct: 1 ESPDLPTWLSNSQNQKPSDPDDGDFVIPSLANWVENPNLETHRNVPSPLLFEPQVSNADK 60
Query: 100 ISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMH 159
+S+IL K+Y S VV+AL G+ +N LV Q L RF + AFG F WAK QT Y+H
Sbjct: 61 LSEILKKRYSSEAAVVKALNESGIDATNELVSQILMRFDSHCVVAFGVFIWAKNQTSYVH 120
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
TPE+Y+ M+D+LGK KKF LMW LV++M LN GYVSLAT S +MRRL + +Y DA++
Sbjct: 121 TPELYDYMIDILGKFKKFSLMWSLVEQMKGLN-GYVSLATASKVMRRLAKARKYKDAIDV 179
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKT 279
FRG++KYG KD AL+VLMD LVK VE A+ FLEFKDCI L S FNILIHG+CK
Sbjct: 180 FRGIEKYGASKDREALNVLMDALVKEGDVEDAHSAFLEFKDCITLDSSSFNILIHGYCKA 239
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
R A+K M+EM + GF PDVVSY+CFI YC +KDFR V+ EMQEKGCKP+VITY
Sbjct: 240 RMFVVARKIMEEMEKHGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITY 299
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T VMHALGKA+Q+NEAL+VYEKMK + CLPD+ FYSSLI++LS++GR+KDA ++FEDM+K
Sbjct: 300 TTVMHALGKARQLNEALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEK 359
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
QGV N+ YNTMISSACA S+ +ALKLL++ME D CKPD +TYAPLLKMCCR+K +K+
Sbjct: 360 QGVCRNLWVYNTMISSACAHSQGGSALKLLERMEGDSCKPDVKTYAPLLKMCCRRKSIKL 419
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L FLL+HMFKN+VS+D GTY LV +GKLE AC +F+E + KG+VP T+K L E
Sbjct: 420 LKFLLSHMFKNNVSVDLGTYTLLVNEFCRNGKLEHACFYFQEAVLKGMVPMVKTFKALVE 479
Query: 520 KLEKKRLGNAKERINKLL 537
+LE+K + KE+I KL+
Sbjct: 480 ELEQKNMKEMKEKIEKLM 497
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 305/548 (55%), Positives = 387/548 (70%), Gaps = 14/548 (2%)
Query: 1 MLPKHNILKLLSQSHLQKHAKIYYLCYLS----CNPLCTTAESPSSTESPSLPSWIKFFD 56
ML K+ IL L++ HL +S NP CT + S ESP LP W+ F D
Sbjct: 44 MLSKYRILHHLTR-HLSPRITTTRSSNVSPHFFINPFCTVVVN--SPESPELPPWVMFSD 100
Query: 57 SQSP---DEDFVIPSLAGWVESHRLNEKSRISSRVLSEN--HETDVDKISKILSKQ-YQS 110
+P D+DFVIPSLA WV+S L K ++ ++ E H DV+KIS L +Q + S
Sbjct: 101 KPTPSNSDDDFVIPSLAHWVDSSILQTKPKLFAKPSLEESIHLEDVEKISTFLKEQRHSS 160
Query: 111 PDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
D VV+AL G G VSNSLV Q L+RF ND A+GFF WAK QT Y+H+PE+YN MVD+
Sbjct: 161 HDHVVQALDGSGFRVSNSLVMQVLKRFGNDWVAAYGFFIWAKKQTPYVHSPEVYNLMVDI 220
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
LGK+K+F LMW+LVKEM + GYV L TMS +MRR + R++DAVEAFRGM KYGVEK
Sbjct: 221 LGKAKEFDLMWKLVKEMKRIE-GYVCLDTMSKVMRRFAKAQRHEDAVEAFRGMGKYGVEK 279
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
DT AL+ L+D LVKG S+E A+ V EFK +PLSS FNILI+GWCK R + A+K M+
Sbjct: 280 DTAALNKLLDALVKGQSIEIAHNVLDEFKSSVPLSSPSFNILINGWCKVRNFEKARKVME 339
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
E + GF PDV +Y FIE YC +KDFRKVD+ L+EM+ GC P+ +TYTI++ GKA
Sbjct: 340 ERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAG 399
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
Q+++AL+ YE+MK D +PDT FYSSL++IL KAGR+KDA E+F+DM KQGVV +V+TYN
Sbjct: 400 QLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYN 459
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
TMIS+ACA S+EE AL+LL++MEE CKPD +TY PLLKMCC+KKRMKVL FLL HMFK+
Sbjct: 460 TMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKH 519
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
D+ D GTY LV+ L SGKL AC+FFEEM+SKG P +T K+L KLE K + K
Sbjct: 520 DLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKLLTRKLEIKSMLKEK 579
Query: 531 ERINKLLA 538
++I +L+A
Sbjct: 580 DQIEELMA 587
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust.
Identities = 286/510 (56%), Positives = 370/510 (72%), Gaps = 11/510 (2%)
Query: 33 LCTTAESPSSTESPSLPSWIKFFDSQSP-----DEDFVIPSLAGWVESHRLNEKSRISSR 87
LCT AESP LP W+KF D+ +P D++FVIPSLA WV++H L K ++ ++
Sbjct: 31 LCTMAESPE------LPPWLKFSDTPTPPDADSDDNFVIPSLAHWVDTHMLITKPKVLTQ 84
Query: 88 VLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGF 147
+++ ++D I+K+L K+Y SP+ AL G S+ LV Q L RFSND PA GF
Sbjct: 85 SPKQDNLDELDAITKVLKKRYPSPELAALALDGLSFQPSSGLVSQVLNRFSNDWVPALGF 144
Query: 148 FTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRL 207
F WAK+QTGY H+PE+ N MVD+LGK K F M +LV+EM +L GYV+L TM+ ++RRL
Sbjct: 145 FKWAKSQTGYRHSPELCNLMVDILGKCKSFDPMSDLVEEMAKLEQGYVTLETMAKVIRRL 204
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ 267
+ +++DA+EAFR M K+GV KDT AL+VL+D LVKG+SVEHA+KV LEFK IPLSS
Sbjct: 205 AKARKHEDAIEAFRRMDKFGVNKDTAALNVLIDALVKGDSVEHAHKVVLEFKGLIPLSSH 264
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
FN+L+HGWC+ RK D+A+KAM++M + GF PDV SYT FIE YC E+DFRKVD L+EM
Sbjct: 265 SFNVLMHGWCRARKFDNARKAMEDMKELGFEPDVFSYTSFIEAYCHERDFRKVDQVLEEM 324
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+E GC P+ +TYT VM LGKA Q+++AL+VYEKMK D C+ DT YS +IFIL KAGR+
Sbjct: 325 RENGCPPNAVTYTTVMLHLGKAGQLSKALEVYEKMKCDGCVADTPVYSCMIFILGKAGRL 384
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
KDA ++FEDM KQGVV +V+TYNTMIS+ACA S EE AL+LL++ME+ CKP+ TY PL
Sbjct: 385 KDACDVFEDMPKQGVVRDVVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVGTYHPL 444
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
LKMCC+KKRMKVL FLL HMFKND+S D TY+ LV L ++GK+ A SF EEM+ KG
Sbjct: 445 LKMCCKKKRMKVLKFLLDHMFKNDISPDLATYSLLVNALCKTGKVADAYSFLEEMVLKGF 504
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
P ST K L +LE + KER+ + +
Sbjct: 505 TPKPSTLKGLAGELESLSMLEEKERVEEWM 534
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 560 bits (1442), Expect = e-157, Method: Compositional matrix adjust.
Identities = 287/516 (55%), Positives = 375/516 (72%), Gaps = 12/516 (2%)
Query: 27 YLSCNPLCTTAESPSSTESPSLPSWIKFFDSQSP-----DEDFVIPSLAGWVESHRLNEK 81
+L NPLCT A ESP LP W+KF D+ +P D++FVIPSLA WV++H L K
Sbjct: 28 FLYGNPLCTMA------ESPELPPWLKFSDTPTPPDADSDDNFVIPSLAHWVDTHMLTTK 81
Query: 82 SRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDL 141
++ ++ +++ +++ ++K+L K+Y SP+ AL G S+ LV Q L RFSND
Sbjct: 82 PKVLTQSPKQDNLDELEAVTKVLQKRYPSPELASLALDGLSFQPSSGLVSQVLNRFSNDW 141
Query: 142 TPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS 201
PA GFF WAK+ TGY H+PE+YN MVD+LGK + F M ELV+EM L GYV+L TM+
Sbjct: 142 VPALGFFKWAKSLTGYRHSPELYNLMVDILGKCRSFDSMSELVEEMARL-EGYVTLETMT 200
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
+MRRL R +++DA+EAF M+K+GV+KDT AL+VL+D LVKG+SVEHA+KV LEFK
Sbjct: 201 KVMRRLARARKHEDAIEAFGRMEKFGVKKDTAALNVLIDALVKGDSVEHAHKVVLEFKGS 260
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
IPLSS+ FN+L+HGWC+ R D+A+KAM++M + GF PDV SYT FIE Y E+DFRKVD
Sbjct: 261 IPLSSRSFNVLMHGWCRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYGHERDFRKVD 320
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L+EM+E GC P+ +TYT VM LGKA Q+ +AL+VYEKMKSD C+ DT FYSS+IFIL
Sbjct: 321 QVLEEMRENGCPPNAVTYTSVMLHLGKAGQLRKALEVYEKMKSDGCVADTPFYSSMIFIL 380
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
KAGR+KDA ++FEDM KQGVV +V+TYN+MIS+ACA S EE AL+LL++ME+ CKP+
Sbjct: 381 GKAGRLKDACDVFEDMPKQGVVRDVVTYNSMISTACAHSREETALRLLKEMEDGSCKPNV 440
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY LLKMCC+KKRMKVL FLL HMFKN++S D TY+ LV L +SGK+E A SF EE
Sbjct: 441 GTYHRLLKMCCKKKRMKVLKFLLDHMFKNNISPDLATYSLLVNALRKSGKVEDAYSFLEE 500
Query: 502 MISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
M+ +G P ST K L +LE K + K R+ + +
Sbjct: 501 MVLRGFTPKPSTLKKLAGELESKSMLEEKVRVEEWM 536
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 119/279 (42%), Gaps = 38/279 (13%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y ++ G + F + ++++EM E N + T +++M L + G+ A+E + M
Sbjct: 303 YTNFIEAYGHERDFRKVDQVLEEMRE-NGCPPNAVTYTSVMLHLGKAGQLRKALEVYEKM 361
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
K G DT P S + IL K ++
Sbjct: 362 KSDGCVADT------------------------------PFYSSMIFIL----GKAGRLK 387
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
DA ++M +QG DVV+Y I C LKEM++ CKP+V TY ++
Sbjct: 388 DACDVFEDMPKQGVVRDVVTYNSMISTACAHSREETALRLLKEMEDGSCKPNVGTYHRLL 447
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
K K++ + + M ++ PD + YS L+ L K+G+V+DA E+M +G
Sbjct: 448 KMCCKKKRMKVLKFLLDHMFKNNISPDLATYSLLVNALRKSGKVEDAYSFLEEMVLRGFT 507
Query: 404 PNVLTYNTMISSACARSEEENALKL---LQKMEEDLCKP 439
P T + ++S E +++ + + ++L +P
Sbjct: 508 PKPSTLKKLAGELESKSMLEEKVRVEEWMDRFSQNLIRP 546
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 299/553 (54%), Positives = 379/553 (68%), Gaps = 22/553 (3%)
Query: 1 MLPKHNILKLLSQSHLQKHAKIYYLCYLSCNPLCTTAESP-SSTESPSLPSWIKFFDSQS 59
ML K I KL+S + ++ I+ +L N T ESP + ESP LPSWIK F S
Sbjct: 1 MLTKLRISKLVSYTLPRR---IFQRRFLVTNN--TAEESPIVAAESPELPSWIKDFLSNK 55
Query: 60 P----------DEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQ 109
P DEDFVIPSLA WVES + + + V+ + E D+DK+ L+K+
Sbjct: 56 PSSSSSSVSKDDEDFVIPSLANWVESQKFSRQQVSEGNVVKKPVE-DIDKVCDFLNKKDT 114
Query: 110 SPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVD 169
S + VV+ L C V V+ SLV Q LRRFSN A+GFF WA +QTGY+H+ YN MVD
Sbjct: 115 SHEDVVKELSKCDVVVTESLVLQVLRRFSNGWNQAYGFFIWANSQTGYVHSGHTYNAMVD 174
Query: 170 VLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK-YG 227
VLGK + F LMWELV EM++ V+L TMS +MRRL + G+Y+ AV+AF M+K YG
Sbjct: 175 VLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEKSYG 234
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
V+ DT A++ LMD LVK NS+EHA++VFL+ D I ++ FNILIHG+CK RK DDA+
Sbjct: 235 VKTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARKFDDARA 294
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
M M F+PDVV+YT F+E YC+E DFR+V++ L+EM+E GC P+V+TYTIVMH+LG
Sbjct: 295 MMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTIVMHSLG 354
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
K+KQ+ EAL VYEKMK D C+PD FYSSLI ILSK GR KDA EIFEDM QGV +VL
Sbjct: 355 KSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQGVRRDVL 414
Query: 408 TYNTMISSACARSEEENALKLLQKMEE---DLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
YNTMIS+A S +E AL+LL++ME+ + C P+ ETYAPLLKMCC KK+MK+L LL
Sbjct: 415 VYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMKLLGILL 474
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
HM KNDVS+D TY L+RGL SGK+E AC FFEE + KG+VP ST KML ++LEKK
Sbjct: 475 HHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDSTCKMLVDELEKK 534
Query: 525 RLGNAKERINKLL 537
+ AK +I L+
Sbjct: 535 NMAEAKLKIQSLV 547
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 9/207 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM-STIMRRLVRGGRYDDAVEAFRG 222
Y ++ LGKSK+ + ++M E +G V A S+++ L + GR+ DA E F
Sbjct: 346 YTIVMHSLGKSKQVAEALGVYEKMKE--DGCVPDAKFYSSLIHILSKTGRFKDAAEIFED 403
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-----CIPLSSQIFNILIHGWC 277
M GV +D + ++ + + E A ++ +D C P + + + L+ C
Sbjct: 404 MTNQGVRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSP-NVETYAPLLKMCC 462
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+K+ + M + S DV +Y I C + +E KG P
Sbjct: 463 HKKKMKLLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEACLFFEEAVRKGMVPRDS 522
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKS 364
T +++ L K LK+ ++S
Sbjct: 523 TCKMLVDELEKKNMAEAKLKIQSLVQS 549
>gi|224107981|ref|XP_002314676.1| predicted protein [Populus trichocarpa]
gi|222863716|gb|EEF00847.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 284/559 (50%), Positives = 372/559 (66%), Gaps = 25/559 (4%)
Query: 1 MLPKHNILKLLSQSHLQKHAKIYYLC------YLSCNPLCTTAESPSSTESPSLPSWIKF 54
M PKH +LKL +S K YL C + SP S L +W+
Sbjct: 1 MQPKHQMLKLYRKSLSPKPLLANYLLPKLLCTLTELTLACDSPNSPQPRPS-ILSTWL-- 57
Query: 55 FDSQSP------DEDFVIPSLAGW-----VESHRLNEKSRISSRVLSENHETDVDKISKI 103
+ Q P + FVIPS A +ESH K+ S +LSE ++D K+ +I
Sbjct: 58 CNDQKPKVGKPTNGHFVIPSHANCDKYPNIESH----KNIASLSLLSEASDSDAHKVGEI 113
Query: 104 LSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEM 163
L K Y S D VVEAL G+S ++ LV Q L+RFSN A G F WAK QTGY+H PE+
Sbjct: 114 LKKHYLSEDAVVEALNESGISATHDLVSQLLKRFSNQWLIALGVFIWAKNQTGYVHKPEI 173
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+M+D+LGKS+KF LMW+LV+EM LN GYVSL TM +M+RLVR G+Y++A++AFRG+
Sbjct: 174 YNSMIDILGKSRKFSLMWDLVQEMSGLN-GYVSLVTMGKVMKRLVRDGKYNEAIDAFRGL 232
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
+K+G+ K T A++VLMD L + VE A V LEF+ C+ L + +NIL G+CK R
Sbjct: 233 EKFGLSKSTEAMNVLMDILARNGRVEDARAVALEFEGCLTLDYRSYNILSSGYCKARMFG 292
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
DA+K M+EM ++GF P+VVSYT FIE Y +KDFR V+ L EMQEKGC P +ITYT+ +
Sbjct: 293 DARKTMEEMEERGFHPNVVSYTAFIEAYGEQKDFRNVEIILNEMQEKGCPPDLITYTVYI 352
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
ALGKA+QIN+AL++ E++K + + T FY SLI L +GR+KDA IFED++KQGV
Sbjct: 353 RALGKARQINKALEICEEIKRNGFVLGTQFYCSLIHSLCLSGRLKDAWNIFEDVEKQGVG 412
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
++ Y MIS+ACA S++E+ALKLL KMEED CKPD +TYAPLLKMCCRKK MK+L FL
Sbjct: 413 RDLGMYKAMISAACALSQDESALKLLHKMEEDSCKPDVQTYAPLLKMCCRKKSMKMLKFL 472
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
L HMF+NDVS+D TY LV GL + GKL+ AC FF+E + KG+VP TYK+L E+LE+
Sbjct: 473 LNHMFENDVSIDIVTYDLLVHGLRKQGKLKYACFFFQEAVLKGMVPCDKTYKILLEELER 532
Query: 524 KRLGNAKERINKLLAHAKE 542
K + K +I KL+ AKE
Sbjct: 533 KNMAEMKGKIEKLMLRAKE 551
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 249/481 (51%), Positives = 332/481 (69%), Gaps = 4/481 (0%)
Query: 63 DFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCG 122
+F I LA WV++ L I++ D+DK+ IL + + S D VV+AL G
Sbjct: 4 NFFISPLANWVDNPTLENFKSIAAE---SGTGGDIDKVKGILKRHFPSEDAVVKALDESG 60
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
++ +N LV Q L RFSN A G F WAK QTGY+HTP +Y+ +VD+LGK KKF +MW+
Sbjct: 61 INATNDLVSQLLERFSNQWITALGVFIWAKNQTGYVHTPRLYDLVVDILGKCKKFGIMWK 120
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
+V EM+ELN G VS +TMS ++RRL G Y D ++ RG++KY V+KDT AL+++M L
Sbjct: 121 VVNEMNELN-GQVSFSTMSIVVRRLASSGMYKDVIDVLRGLEKYRVKKDTVALNMVMHAL 179
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K + AY VFLEFKD I L S FNILIHG+C+ R +DDA+K M+EM + GF PD
Sbjct: 180 AKQGGAKDAYSVFLEFKDSITLDSHSFNILIHGYCEARMLDDARKTMEEMEKHGFRPDAS 239
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
SYTCFI+ YC++KDFR V+ L EM EKGC+P VI Y+I + ALGKA++INEAL+VYEKM
Sbjct: 240 SYTCFIKAYCKQKDFRNVEVILNEMGEKGCEPDVIAYSIYIRALGKARKINEALEVYEKM 299
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+ C PD F+S+LI++L ++GR+ DA +FEDM+ GV ++ TYN MI ACA +
Sbjct: 300 NKNSCKPDAKFFSTLIYVLGRSGRLNDAWYVFEDMENHGVSRDLWTYNAMIYHACANRQG 359
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+ALKLL++ME + CKPD ETY PLLKMCC+ K MKVL FLL+HMF N+V +D TYA L
Sbjct: 360 NSALKLLERMEVNSCKPDLETYQPLLKMCCKMKDMKVLKFLLSHMFNNNVRIDLSTYALL 419
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKE 542
+R L ESGKLE AC FF++ + GIVP TY++L ++L + + K +I KL+ AKE
Sbjct: 420 IRELAESGKLEHACFFFQDAVLNGIVPKDRTYEILLKELGQNNMVEMKGKIEKLMLQAKE 479
Query: 543 Q 543
Q
Sbjct: 480 Q 480
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 487 bits (1253), Expect = e-135, Method: Compositional matrix adjust.
Identities = 244/509 (47%), Positives = 334/509 (65%), Gaps = 13/509 (2%)
Query: 48 LPSWIKFF--DSQSPDED----FVIPSLAGWVESHRLNEKSR-ISSRVLSENHE-----T 95
LP W + D S DED FV+P + VE S+ +S R + +HE
Sbjct: 35 LPEWFRNPKKDGDSFDEDDHDEFVLPIKSNPVEERSHGGGSKPLSIRPEAASHEEAEFEA 94
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
D D+ S+IL+ + SP+ +V A+ C V VS+ +V++ LRRF +D AFGFF WA Q
Sbjct: 95 DFDEASRILTSCFASPEAIVIAMDCCPVRVSDRMVDKILRRFGSDWVAAFGFFMWAGAQE 154
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY H+ + YN+MVD+LGK K+F LMW L+ +MDE+ G VSLATM+ +MRRL R+ D
Sbjct: 155 GYRHSADSYNSMVDILGKFKQFDLMWGLISQMDEIG-GLVSLATMTKVMRRLAGASRWTD 213
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
A++AF M ++GV KDT A++VL+DTL K SV+ A F E + +P FN L+HG
Sbjct: 214 AIDAFNKMDQFGVVKDTTAMNVLLDTLCKERSVKRARGAFQELRGSVPPDESSFNTLVHG 273
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
WCK R +++A+ MKEM + GF P V++YT IE YC EKDF+ V L EM+ KGC P+
Sbjct: 274 WCKARMMNEARDMMKEMEEHGFKPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPN 333
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
VITYTIVMHALGKA + EAL +++K++ D C PD SFY+SLI+IL +AGR++DAN + +
Sbjct: 334 VITYTIVMHALGKAGRTQEALDIFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVD 393
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M+ GV P V T+NT+IS+AC S+ ENALK+L KMEE CKPD +TY PLLK+CC+++
Sbjct: 394 KMRMTGVRPTVATFNTLISAACDHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQ 453
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+KVL FL+ HMF+ D++ D TY LV L +GK +C F EEM+ KG P T+
Sbjct: 454 WIKVLRFLICHMFRKDITPDFSTYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKETFD 513
Query: 516 MLEEKLEKKRLGNAKERINKLLAHAKEQK 544
++ EKL+K L +AK++I L A K
Sbjct: 514 LVAEKLDKANLHSAKKKIQLLTLQAAAVK 542
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 227/451 (50%), Positives = 315/451 (69%), Gaps = 1/451 (0%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
E D+D++S+ILS + SP+ +V A+ C V VS +V++ LRRF +D AFGFF WA
Sbjct: 93 EADIDEVSRILSSHFASPEAIVIAMDCCPVRVSGRMVDKILRRFGSDWVAAFGFFMWAGA 152
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q GY H ++YN MVD+LGK K+F L+W L+++MDE+ VSLATM+ +MRRL R+
Sbjct: 153 QEGYCHHADLYNLMVDILGKFKQFDLLWGLIRQMDEIGC-LVSLATMTKVMRRLAGANRW 211
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
DA++AF M ++GV +DT+A++ L+DTL K SV+ A VF E + +P FN L+
Sbjct: 212 TDAIDAFNKMDQFGVVRDTKAMNALLDTLCKEKSVKRARGVFQELRGVVPPDESSFNTLV 271
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
HGWC+ R +++A+ MKEM + GFSP V++YT IE YC EKDF+ V L EM KGC+
Sbjct: 272 HGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAILNEMCSKGCR 331
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+VITYTIVMHALGKA + EAL V++K+K D C+PD SFY+S+I+IL +AGR++DAN +
Sbjct: 332 PNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRAGRLEDANSV 391
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
F++M + G+ P V +NTMIS+AC S+ ENALK+L KMEE CKPD +TY PLLK+CC+
Sbjct: 392 FDEMCRTGIPPTVAIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKTYTPLLKLCCK 451
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
++ MK+L FL+ HMF+ D+S D TY LV L +GK +C F EEM+ KG +P T
Sbjct: 452 RQWMKILPFLICHMFRKDISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVLKGFMPKQET 511
Query: 514 YKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
+ ++ EKL+K L +AK++I L A K
Sbjct: 512 FDLVMEKLDKGNLHSAKKKIQHLKLRAAALK 542
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 240/529 (45%), Positives = 330/529 (62%), Gaps = 19/529 (3%)
Query: 34 CTTAESPSSTESPSLPSWIKFFDSQSP--------DEDFVIPSLAGWVESHRLNEKSRIS 85
C ++ ST LP W + P D+DFV+P+ + + E + S
Sbjct: 52 CKHKKTSFSTVGFDLPDWFRNPKDGYPCSRLDGNGDDDFVLPAKSDFSEQQGCSATGGGS 111
Query: 86 S--RVLSE--------NHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLR 135
S +L+ E D+D++S+IL ++ SP+ +V + C V VS LV + L
Sbjct: 112 SPLSILASCPASHEDAEFEADMDEVSRILRSRFASPEAIVITMDCCPVRVSARLVSKVLS 171
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
RFSND AFGFF WA TQ GY H + Y+ MVD+LGK K+F LM L+ +M E+ G V
Sbjct: 172 RFSNDWVAAFGFFMWAGTQEGYCHCADSYDMMVDILGKFKQFDLMCGLIGQMHEIG-GLV 230
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
SLATM+ +MRRL R+ DA++AF M ++GV KDT+A++VL+DTL K SV+ A F
Sbjct: 231 SLATMTKVMRRLCGANRWSDAIDAFHKMDRFGVAKDTKAMNVLLDTLCKERSVKRARGAF 290
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
K IP FN L+HGWCK R + +A++ MKEM + GFSP V +YTC IE YC EK
Sbjct: 291 QALKGTIPPDESSFNTLVHGWCKARMLKEARETMKEMERHGFSPSVTTYTCLIEAYCMEK 350
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
DF+ VD L EM KGC P++ITYTIVMHALGKA + EAL ++K+K D C D SFY+
Sbjct: 351 DFQTVDGILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALDTFDKVKQDGCALDASFYN 410
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
LI+IL +AGR++DAN + E+M + G+ PN+ T+NT+IS+AC S ENALKLL +MEE
Sbjct: 411 CLIYILCRAGRLQDANFVVEEMHRTGISPNLTTFNTLISAACDHSLAENALKLLVQMEEQ 470
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C PD +TY PLLK+CCR+K +K L FL+ HMF+ D++ D TY LV L +G+L +
Sbjct: 471 SCNPDIKTYTPLLKLCCRRKWVKTLLFLICHMFRKDITPDFSTYTLLVCWLCRNGRLTQS 530
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
C F EEM+ KG P +T+ ++ EKL+ + +A +I L H + +
Sbjct: 531 CLFLEEMVLKGFTPQQATFDLVLEKLKNMHMLSAVRKIQLLRMHTEGTR 579
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 468 bits (1203), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 306/443 (69%), Gaps = 1/443 (0%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
E D+D++S+ILS ++ SP+ ++ A+ C V V+ LV++ L RFSND AFGFF W T
Sbjct: 1378 EADIDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGT 1437
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q GY H + Y+ MVD+LGK K+F LMW L+ +M E+ G +SL TM+ +MRRL R+
Sbjct: 1438 QGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVG-GLMSLMTMTKVMRRLAGASRW 1496
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
+A++AF M ++GV KDT+A++VL+DTL K SV+ A VF E + IP FN L+
Sbjct: 1497 TEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLV 1556
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
HGWCK R + +A M+EM Q GFSP VV+YT +E YC EKDF+ V L EM+++ C
Sbjct: 1557 HGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCP 1616
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+V+TYTI+MHALGKA + EAL ++K+K D PD SFY+SLI+IL +AGR++DA +
Sbjct: 1617 PNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSV 1676
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
E+M+ G+ PNV T+NT+IS+AC S+ ENALKLL KMEE C PD +TY PLLK+CC+
Sbjct: 1677 VEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCK 1736
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
++ +K+L FL+ HMF+ D+S D TY LV L +GK+ +C F EEM+SKG P T
Sbjct: 1737 RQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQET 1796
Query: 514 YKMLEEKLEKKRLGNAKERINKL 536
+ ++ EKLEK+ L + ++I L
Sbjct: 1797 FDLVMEKLEKRNLQSVYKKIQVL 1819
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 306/443 (69%), Gaps = 1/443 (0%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
E D+D++S+ILS ++ SP+ ++ A+ C V V+ LV++ L RFSND AFGFF W T
Sbjct: 1419 EADIDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGT 1478
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q GY H + Y+ MVD+LGK K+F LMW L+ +M E+ G +SL TM+ +MRRL R+
Sbjct: 1479 QGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVG-GLMSLMTMTKVMRRLAGASRW 1537
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
+A++AF M ++GV KDT+A++VL+DTL K SV+ A VF E + IP FN L+
Sbjct: 1538 TEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLV 1597
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
HGWCK R + +A M+EM Q GFSP VV+YT +E YC EKDF+ V L EM+++ C
Sbjct: 1598 HGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCP 1657
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+V+TYTI+MHALGKA + EAL ++K+K D PD SFY+SLI+IL +AGR++DA +
Sbjct: 1658 PNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSV 1717
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
E+M+ G+ PNV T+NT+IS+AC S+ ENALKLL KMEE C PD +TY PLLK+CC+
Sbjct: 1718 VEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCK 1777
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
++ +K+L FL+ HMF+ D+S D TY LV L +GK+ +C F EEM+SKG P T
Sbjct: 1778 RQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQET 1837
Query: 514 YKMLEEKLEKKRLGNAKERINKL 536
+ ++ EKLEK+ L + ++I L
Sbjct: 1838 FDLVMEKLEKRNLQSVYKKIQVL 1860
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 466 bits (1200), Expect = e-129, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 306/443 (69%), Gaps = 1/443 (0%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
E D+D++S+ILS ++ SP+ ++ A+ C V V+ LV++ L RFSND AFGFF W T
Sbjct: 99 EADIDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGT 158
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q GY H + Y+ MVD+LGK K+F LMW L+ +M E+ G +SL TM+ +MRRL R+
Sbjct: 159 QGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVG-GLMSLMTMTKVMRRLAGASRW 217
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
+A++AF M ++GV KDT+A++VL+DTL K SV+ A VF E + IP FN L+
Sbjct: 218 TEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLV 277
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
HGWCK R + +A M+EM Q GFSP VV+YT +E YC EKDF+ V L EM+++ C
Sbjct: 278 HGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCP 337
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+V+TYTI+MHALGKA + EAL ++K+K D PD SFY+SLI+IL +AGR++DA +
Sbjct: 338 PNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSV 397
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
E+M+ G+ PNV T+NT+IS+AC S+ ENALKLL KMEE C PD +TY PLLK+CC+
Sbjct: 398 VEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCK 457
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
++ +K+L FL+ HMF+ D+S D TY LV L +GK+ +C F EEM+SKG P T
Sbjct: 458 RQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQET 517
Query: 514 YKMLEEKLEKKRLGNAKERINKL 536
+ ++ EKLEK+ L + ++I L
Sbjct: 518 FDLVMEKLEKRNLQSVYKKIQVL 540
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 220/443 (49%), Positives = 306/443 (69%), Gaps = 1/443 (0%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
E D+D++S+ILS ++ SP+ ++ A+ C V V+ LV++ L RFSND AFGFF W T
Sbjct: 158 EADIDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGT 217
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q GY H + Y+ MVD+LGK K+F LMW L+ +M E+ G +SL TM+ +MRRL R+
Sbjct: 218 QGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVG-GLMSLMTMTKVMRRLAGASRW 276
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
+A++AF M ++GV KDT+A++VL+DTL K SV+ A VF E + IP FN L+
Sbjct: 277 TEAIDAFHKMDRFGVVKDTKAMNVLLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLV 336
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
HGWCK R + +A M+EM Q GFSP VV+YT +E YC EKDF+ V L EM+++ C
Sbjct: 337 HGWCKARMLKEALDTMEEMKQHGFSPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCP 396
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+V+TYTI+MHALGKA + EAL ++K+K D PD SFY+SLI+IL +AGR++DA +
Sbjct: 397 PNVVTYTILMHALGKAGRTREALDTFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSV 456
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
E+M+ G+ PNV T+NT+IS+AC S+ ENALKLL KMEE C PD +TY PLLK+CC+
Sbjct: 457 VEEMRTTGIAPNVTTFNTLISAACDHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCK 516
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
++ +K+L FL+ HMF+ D+S D TY LV L +GK+ +C F EEM+SKG P T
Sbjct: 517 RQWVKILLFLVCHMFRKDISPDFSTYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQET 576
Query: 514 YKMLEEKLEKKRLGNAKERINKL 536
+ ++ EKLEK+ L + ++I L
Sbjct: 577 FDLVMEKLEKRNLQSVYKKIQVL 599
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/449 (40%), Positives = 283/449 (63%), Gaps = 11/449 (2%)
Query: 100 ISKILSKQYQSPDKVVEAL---KGC-GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
+S+I ++ S D+V ++L + C + +S +LV+ L RF +D A G F WA+++
Sbjct: 49 VSRI--REGSSDDEVFKSLVHDEACNAIPMSQNLVDVLLHRFKDDWKSALGLFRWAESRL 106
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY H PE Y+ MVD+LGK K+ M L++EM + N V L+T++ MRRL G ++D
Sbjct: 107 GYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQGN--LVRLSTVAKAMRRLAGAGEWED 164
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
AV F + + +EK+T ++++L+DTL K VE A +FLE K I ++ FNI IHG
Sbjct: 165 AVRVFDDLGNFELEKNTESMNLLLDTLCKERKVEQARAIFLELKPHISPNTHTFNIFIHG 224
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
WCK +VD+A+ ++EM G P V+SY+ I+ YCR+ +FRKV + L +MQ +GC P+
Sbjct: 225 WCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPN 284
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+TYT +M +L K +Q EAL++ E+M+S C PDT FY++LI L +AG++++A +FE
Sbjct: 285 VVTYTTIMCSLTKVEQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRAGQLREAVRVFE 344
Query: 396 -DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED-LCKPDCETYAPLLKMCCR 453
+M K GV PN TYN+MI+ C S+E+ AL LL+++E CKPD +TY P+LK C +
Sbjct: 345 VEMPKTGVPPNTSTYNSMIAMFCHHSQEQKALNLLREIENSTFCKPDIQTYYPVLKSCFK 404
Query: 454 KKRMKVL-NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
++ L NFL + K+ +S+D Y L+ GL + K E + FEEM+ K I P +
Sbjct: 405 TGKIDSLSNFLDDMVNKHHLSLDVSAYTLLIHGLCRANKCEWGYNLFEEMVGKAITPRYK 464
Query: 513 TYKMLEEKLEKKRLGNAKERINKLLAHAK 541
T +L +++++K + +A ERI + K
Sbjct: 465 TCALLLDEIKQKNMHDAAERIEVFMKQMK 493
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 339 bits (870), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/419 (42%), Positives = 269/419 (64%), Gaps = 6/419 (1%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
+ +S LV + L R+ +D A G F WA ++ + H+ E Y+ MVD+LG+ K + +
Sbjct: 71 IPLSRDLVHRLLWRYKDDWKSALGVFRWASSRPSFRHSSESYDMMVDILGRMKVMEKLRD 130
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
L++EM E G V++ T++ MRR V G++ DAV F ++ G+EK+T ++++L+DTL
Sbjct: 131 LLEEMRE--GGLVNMNTVAKAMRRFVGAGQWVDAVRIFDDLQALGLEKNTESMNLLLDTL 188
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K V+ A ++FLE K I ++ FNI IHGWCK +VD+A ++EM GF P V+
Sbjct: 189 CKEKFVQQAREIFLELKQHIAPNAHTFNIFIHGWCKICRVDEAHWTIQEMKGYGFHPCVI 248
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
SY+ I+ YC+E +F +V + L EMQ +GC +VITYT +M ALGKAK+ EALKV E+M
Sbjct: 249 SYSTLIQCYCQEGNFSRVYELLDEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERM 308
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-DMKKQGVVPNVLTYNTMISSACARSE 421
+S C PDT F++SLI L +AGR+ DA ++F+ +M K GV PN TYN+MIS C ++
Sbjct: 309 RSSGCRPDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQ 368
Query: 422 EENALKLLQKMEED-LCKPDCETYAPLLKMCCRKKRMK-VLNFLLTHMF-KNDVSMDAGT 478
E+ AL++L++ME CKPD +TY PL+K C R ++ VL+ +L M K +S+D T
Sbjct: 369 EKRALEILKEMENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQHLSLDLST 428
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
Y L+ GL + A S FEEMI + I+P + T ++L +++++K + A E+I L+
Sbjct: 429 YTLLIHGLCREDRCNWAFSLFEEMIDQDIIPRYRTCRLLLDEVKQKNMYQAAEKIEDLM 487
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 120/257 (46%), Gaps = 19/257 (7%)
Query: 156 GYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
GY P + Y+T++ + F ++EL+ EM + ++ T ++IM L + ++
Sbjct: 240 GYGFHPCVISYSTLIQCYCQEGNFSRVYELLDEM-QAQGCSANVITYTSIMCALGKAKKF 298
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEF-KDCIPLSSQIFNI 271
++A++ M+ G DT + L+ TL + ++ A VF +E K + ++ +N
Sbjct: 299 EEALKVPERMRSSGCRPDTLFFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNS 358
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQG-FSPDVVSYTCFIEHYCREKDFRKVDDTLKEM--- 327
+I +C + A + +KEM G PD +Y I+ R K+D L E+
Sbjct: 359 MISMFCYHAQEKRALEILKEMENSGGCKPDAQTYHPLIKSCFRSG---KIDGVLSEILND 415
Query: 328 --QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS--K 383
++ + TYT+++H L + + N A ++E+M D +P Y + +L K
Sbjct: 416 MINKQHLSLDLSTYTLLIHGLCREDRCNWAFSLFEEMIDQDIIPR---YRTCRLLLDEVK 472
Query: 384 AGRVKDANEIFEDMKKQ 400
+ A E ED+ K+
Sbjct: 473 QKNMYQAAEKIEDLMKK 489
>gi|224110770|ref|XP_002315631.1| predicted protein [Populus trichocarpa]
gi|222864671|gb|EEF01802.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 334 bits (856), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 181/435 (41%), Positives = 266/435 (61%), Gaps = 9/435 (2%)
Query: 110 SPDKVVEAL---KGC-GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYN 165
SPD+++ +L + C + VSN LV++ L RF +D A G F WA + GY H PE Y+
Sbjct: 19 SPDEILLSLADEQVCDNIEVSNDLVDKLLLRFKDDWKSALGVFRWAGLRPGYKHRPEAYD 78
Query: 166 TMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK 225
MVD+LGK K+ M EL++EM+ N V+L T+ MRR G+++DAV F +
Sbjct: 79 MMVDILGKMKQMDQMRELLEEMNR--NHLVTLNTVGKAMRRFSGAGKWEDAVRMFDELGT 136
Query: 226 YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDA 285
+G+EK+ ++++L+DTL K VE A +FLE K I ++ FNI IHGWCK VD+A
Sbjct: 137 FGLEKNAESMNLLLDTLCKEGKVEQARAIFLELKSHILPNAHTFNIFIHGWCKANLVDEA 196
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
++EM F P V+SY+ I YCR+ +F KV + L EM+ +GC P+V+TYT ++
Sbjct: 197 HWTLQEMKGHAFRPCVISYSTIILFYCRQHNFSKVYELLDEMEAQGCPPNVVTYTTIIVF 256
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-DMKKQGVVP 404
L K++ EAL++ ++MKS C PDT F++SLI+IL +AGR ++A ++FE +M GV
Sbjct: 257 LAKSQNTEEALQLTQRMKSAGCKPDTPFFNSLIYILGRAGRFQEAVDVFEKEMPNAGVSR 316
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDL-CKPDCETYAPLLKMCCRKKRMKVLNFL 463
+ TYN+MI+ C AL LL++ME K D +T+ PLLK C R M +L+ L
Sbjct: 317 DTSTYNSMIAMLCHHGHVSKALSLLREMETSAPFKLDGQTFYPLLKSCLRTGDMNLLSQL 376
Query: 464 LTHMF-KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L M K+ +S+D YA L+ GL + K + A FEEMISK IVP + T ML E+++
Sbjct: 377 LDDMVKKHQLSLDRSAYALLIHGLCRANKCQWAYHLFEEMISKDIVPKYQTCHMLLEEVK 436
Query: 523 KKRLGNAKERINKLL 537
K + + E+I +
Sbjct: 437 LKSMYDTAEKIEDFM 451
>gi|449435037|ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 325 bits (834), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/419 (39%), Positives = 267/419 (63%), Gaps = 6/419 (1%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
+ +S+ LV + L+RF +D A G F WA++ +G+ HTP++Y+ ++D LGK+K+ M
Sbjct: 100 IQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMRG 159
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
+++EM E V+L T++ MRR G++++AV F ++ YG+EK+T +++VL+DTL
Sbjct: 160 MLEEMKEAR--LVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLDTL 217
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K VE A +++LE K I ++ FN+ IHGWCK K+D+A ++EM G P V+
Sbjct: 218 CKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVI 277
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
SY+ I YC +F KV + L EM +GC +VITYT +M +L K+++ EAL++ E+M
Sbjct: 278 SYSTIILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERM 337
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-DMKKQGVVPNVLTYNTMISSACARSE 421
KS PDT FY+ LI L +AG+V++A +FE +M + V+PN TYN+MI+ C R+
Sbjct: 338 KSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAR 397
Query: 422 EENALKLLQKMEE-DLCKPDCETYAPLLKMCCR--KKRMKVLNFLLTHMFKNDVSMDAGT 478
EE A+KLL++M++ + CKPD +TY PLLK C R K + N L + K+ +S+D T
Sbjct: 398 EEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSLDIST 457
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
Y+ L+ GL + K + A FE+MIS+ I P + T ++L ++ ++K + +RI ++
Sbjct: 458 YSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKNMDGVADRIEGIM 516
>gi|449494995|ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 488
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 167/419 (39%), Positives = 267/419 (63%), Gaps = 6/419 (1%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
+ +S+ LV + L+RF +D A G F WA++ +G+ HTP++Y+ ++D LGK+K+ M
Sbjct: 69 IQLSHDLVYKLLQRFKDDWKSALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMRG 128
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
+++EM E V+L T++ MRR G++++AV F ++ YG+EK+T +++VL+DTL
Sbjct: 129 MLEEMKEAR--LVTLDTVAKAMRRFAGAGQWENAVRIFDDLETYGLEKNTESMNVLLDTL 186
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K VE A +++LE K I ++ FN+ IHGWCK K+D+A ++EM G P V+
Sbjct: 187 CKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVI 246
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
SY+ I YC +F KV + L EM +GC +VITYT +M +L K+++ EAL++ E+M
Sbjct: 247 SYSTIILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERM 306
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-DMKKQGVVPNVLTYNTMISSACARSE 421
KS PDT FY+ LI L +AG+V++A +FE +M + V+PN TYN+MI+ C R+
Sbjct: 307 KSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAR 366
Query: 422 EENALKLLQKMEE-DLCKPDCETYAPLLKMCCR--KKRMKVLNFLLTHMFKNDVSMDAGT 478
EE A+KLL++M++ + CKPD +TY PLLK C R K + N L + K+ +S+D T
Sbjct: 367 EEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLSNLLDEMINKHHLSLDIST 426
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
Y+ L+ GL + K + A FE+MIS+ I P + T ++L ++ ++K + +RI ++
Sbjct: 427 YSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKNMDGVADRIEGIM 485
>gi|255547888|ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546052|gb|EEF47555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 466
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 179/456 (39%), Positives = 287/456 (62%), Gaps = 13/456 (2%)
Query: 87 RVLSENHETDVDKI-SKILSKQYQSPDKVVEAL---KGCG-VSVSNSLVEQTLRRFSNDL 141
+ L ++D+D I +KI + S D++V++L + C + +S+ LV++ L RF +D
Sbjct: 8 QFLDSKRQSDIDVIVAKI--RVGSSHDEIVQSLVHDEVCNSIHLSHELVDKLLFRFKDDW 65
Query: 142 TPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS 201
A G F WA+++ GY H+PE Y+TMVD++GK K+ M L++EM++ +V+L T+
Sbjct: 66 KSALGVFRWAESRAGYKHSPEAYDTMVDIMGKMKQMDQMEFLLEEMEK--GQHVTLKTVG 123
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
MRR ++++ + F + +G+EK+T ++++L+DTL K VE A ++FL+ K
Sbjct: 124 KAMRRFAGARQWENVLRVFDKLGTFGLEKNTESMNLLLDTLCKERKVELAREIFLDLKSH 183
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
I ++ FNI IHGWCK +V++A ++EM G +P V+SY+ ++ YC +F KV
Sbjct: 184 ISPNANTFNIFIHGWCKVNRVEEAYWTIQEMKGHGCTPCVISYSTIVQFYCHRSNFSKVY 243
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ L EM+ +G P+V+TYT VM AL K+++ EAL++ ++MKS C PDT FY+SLI L
Sbjct: 244 ELLDEMEAQGLIPNVVTYTSVMSALAKSEEYEEALQIAQRMKSVGCKPDTLFYNSLIHTL 303
Query: 382 SKAGRVKDANEIFE-DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED-LCKP 439
KAGR ++A ++FE +M GV PN TYN+MI+ C S+E AL LL+++E +CKP
Sbjct: 304 GKAGRPEEAIQVFEVEMPNTGVPPNTSTYNSMIAMLCHHSQERKALNLLKEIEASIICKP 363
Query: 440 DCETYAPLLKMCCRKKRM-KVLNFLLTHMF-KNDVSMDAGTYASLVRGLIESGKLELACS 497
D +TY PLLK C + + +L+ LL M K+ +S+D Y LV GL + K E A
Sbjct: 364 DVQTYYPLLKSCFKAGSIDSLLSQLLDDMVKKHHLSLDFSAYTLLVHGLCRANKCEWAYC 423
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
FEEMI K + P + T ++L ++++ K + +A ++I
Sbjct: 424 LFEEMIGKDMTPKYQTCRLLLDEVKLKHMYDAAQKI 459
>gi|357440039|ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479345|gb|AES60548.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 661
Score = 321 bits (822), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 168/433 (38%), Positives = 270/433 (62%), Gaps = 10/433 (2%)
Query: 109 QSPDKVVEAL---KGC-GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMY 164
S D ++++L +G G+ +S +L+ + L R+ +D A F WA + + + H+ + Y
Sbjct: 64 NSEDDILQSLISDEGVNGIHLSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSY 123
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
+ MVD+LG+ K M E+++EM + ++L T++ +MRR V ++ DAV F ++
Sbjct: 124 DMMVDILGRMKAMDKMREILEEMRQ--ESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQ 181
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDD 284
G+EK+T +++VL+DTL K VE A +++LE K I ++ FNILIHGWC R+V++
Sbjct: 182 FLGLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEE 241
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A ++EM G P V+SY+ I+ YC+E++F +V D L EMQ + C P+V+TYT +M
Sbjct: 242 AHWTIQEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMC 301
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-DMKKQGVV 403
AL KA++ EAL+V E+M + C PDT F++SLI+ L +AGR+ DA +F+ M K V
Sbjct: 302 ALAKAEKFEEALQVVERMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVA 361
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEED-LCKPDCETYAPLLKMCCRKKRMKV-LN 461
PN TYN+MIS C ++EE A +L++ME+ LCKPD +TY PL+K C + + + LN
Sbjct: 362 PNTSTYNSMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLIKSCFKMREIDTWLN 421
Query: 462 FLLTHMF-KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+L M K + +D TY L+ GL + + + A FEEM + IVP + T ++L ++
Sbjct: 422 DILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEMADQDIVPRYKTCRLLLDE 481
Query: 521 LEKKRLGNAKERI 533
+++K + A +I
Sbjct: 482 VKQKNMHLAVVKI 494
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 144/320 (45%), Gaps = 13/320 (4%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ TM+ + R L A EA K + TR++ +L + KGNS + +
Sbjct: 14 GICTMALVSRTLFSSLATYHAAEARDFWHKEQTQDLTRSVDILTTKIGKGNSEDDILQSL 73
Query: 256 L--EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG----FSPDVVSYTCFIE 309
+ E + I LS + N L+ R DD + A+ G F SY ++
Sbjct: 74 ISDEGVNGIHLSENLINRLLF-----RYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVD 128
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
R K K+ + L+EM+++ ++ T VM A+Q +A+++++ ++
Sbjct: 129 ILGRMKAMDKMREILEEMRQESL-ITLNTIAKVMRRFVGARQWKDAVRIFDDLQFLGLEK 187
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+T + L+ L K V+ A EI+ ++ K + PN T+N +I C E A +
Sbjct: 188 NTESMNVLLDTLCKEKFVEQAREIYLEL-KHYIAPNAHTFNILIHGWCNIRRVEEAHWTI 246
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
Q+M+ C+P +Y+ +++ C+++ + LL M + S + TY +++ L ++
Sbjct: 247 QEMKGYGCRPCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKA 306
Query: 490 GKLELACSFFEEMISKGIVP 509
K E A E M + G P
Sbjct: 307 EKFEEALQVVERMNAVGCRP 326
>gi|357142780|ref|XP_003572691.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 317 bits (812), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 170/455 (37%), Positives = 267/455 (58%), Gaps = 8/455 (1%)
Query: 89 LSENHETDVDKI-SKILSKQYQSPDKVVEALK-GC-GVSVSNSLVEQTLRRFSNDLTPAF 145
L+ ET +I + +L + S +V++L GC G+ ++++V+ L +F +D A
Sbjct: 42 LTVEEETSATQIKNSLLKARNGSVQDLVQSLGIGCPGIQPTSNIVDGLLSKFGDDWKSAL 101
Query: 146 GFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMR 205
G F WA++ Y HT + M+D+LGK ++ MW+L+ +M G V++ +T +R
Sbjct: 102 GLFQWAQSSGNYKHTAYACSRMIDLLGKMRQIDQMWDLLSDMH--CRGLVTVEAAATSIR 159
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS 265
RL R+ DAV F + G+E++T ++VL+D L K VE A KVFL I
Sbjct: 160 RLAGARRWKDAVLLFDKLGDMGLERNTETMNVLLDALCKEKKVEVARKVFLVLSPHIQPD 219
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+ FNI +HGWC R++D+A ++EM QGF P V++YT +E YC++ +FR V + L
Sbjct: 220 AYTFNIFVHGWCSARRIDEAMWTIEEMKAQGFPPSVITYTTVLEAYCKQHNFRMVYEILD 279
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
M +GC P+VITYT++M +L K EAL V +MKS C PDT FY+SLI +L KAG
Sbjct: 280 SMSSEGCHPNVITYTMIMTSLAKCHMFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKAG 339
Query: 386 RVKDANEIFE-DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
+ +A+++F+ +M GV ++ TYNTMIS C + +E+AL +L++ME CKPD +TY
Sbjct: 340 HLSEASQVFQVEMPMNGVPRSLATYNTMISVFCYKDLDEDALSVLKEMETQSCKPDLQTY 399
Query: 445 APLLKMCCRKKRM--KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
PLL++ ++ V N L M K+ + +D TY L+ GL G+ + A F+EM
Sbjct: 400 RPLLRLFLSRRGQDDTVRNLLNELMNKHSLGLDLDTYTLLIHGLCRVGETDWAYRLFDEM 459
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
+ IVP + T ++L + ++K++ ERI +
Sbjct: 460 VGSEIVPRYRTCELLLSEAQRKKMEEWVERIQNYM 494
>gi|6721172|gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thaliana]
Length = 572
Score = 315 bits (807), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 257/422 (60%), Gaps = 5/422 (1%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
V++S+ LV + L RF +D A G WA++ G+ H+ + Y+ VD+LGK+KK+ M E
Sbjct: 147 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 206
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
V+ M + V+L T++ IMRR G +++AV F + ++G+EK+T ++++L+DTL
Sbjct: 207 FVERMR--GDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL 264
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K VE A V L+ K I ++ FNI IHGWCK +V++A ++EM GF P V+
Sbjct: 265 CKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVI 324
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
SYT I YC++ +F KV + L EM+ G P+ ITYT +M +L K+ EAL+V +M
Sbjct: 325 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 384
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-DMKKQGVVPNVLTYNTMISSACARSE 421
K C PD+ FY+ LI L++AGR+++A +F +M + GV N TYN+MI+ C E
Sbjct: 385 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 444
Query: 422 EENALKLLQKME-EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF-KNDVSMDAGTY 479
E+ A++LL++ME +LC PD TY PLL+ C ++ + + LL M K+ +S+D TY
Sbjct: 445 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 504
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
L++ L + E A FEEMIS+ I P H T +L E+++KK + + ERI ++
Sbjct: 505 TFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKT 564
Query: 540 AK 541
K
Sbjct: 565 VK 566
>gi|18396782|ref|NP_566222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|79312733|ref|NP_001030630.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546763|sp|Q9M8W9.2|PP211_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04130, mitochondrial; Flags: Precursor
gi|332640519|gb|AEE74040.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332640520|gb|AEE74041.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 315 bits (806), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 257/422 (60%), Gaps = 5/422 (1%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
V++S+ LV + L RF +D A G WA++ G+ H+ + Y+ VD+LGK+KK+ M E
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
V+ M + V+L T++ IMRR G +++AV F + ++G+EK+T ++++L+DTL
Sbjct: 143 FVERMR--GDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL 200
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K VE A V L+ K I ++ FNI IHGWCK +V++A ++EM GF P V+
Sbjct: 201 CKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVI 260
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
SYT I YC++ +F KV + L EM+ G P+ ITYT +M +L K+ EAL+V +M
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-DMKKQGVVPNVLTYNTMISSACARSE 421
K C PD+ FY+ LI L++AGR+++A +F +M + GV N TYN+MI+ C E
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 422 EENALKLLQKME-EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF-KNDVSMDAGTY 479
E+ A++LL++ME +LC PD TY PLL+ C ++ + + LL M K+ +S+D TY
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
L++ L + E A FEEMIS+ I P H T +L E+++KK + + ERI ++
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKT 500
Query: 540 AK 541
K
Sbjct: 501 VK 502
>gi|222423065|dbj|BAH19514.1| AT3G04130 [Arabidopsis thaliana]
Length = 508
Score = 314 bits (805), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 257/422 (60%), Gaps = 5/422 (1%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
V++S+ LV + L RF +D A G WA++ G+ H+ + Y+ VD+LGK+KK+ M E
Sbjct: 83 VNLSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKHSSDAYDMAVDILGKAKKWDRMKE 142
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
V+ M + V+L T++ IMRR G +++AV F + ++G+EK+T ++++L+DTL
Sbjct: 143 FVERMR--GDKLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGEFGLEKNTESMNLLLDTL 200
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K VE A V L+ K I ++ FNI IHGWCK +V++A ++EM GF P V+
Sbjct: 201 CKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVI 260
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
SYT I YC++ +F KV + L EM+ G P+ ITYT +M +L K+ EAL+V +M
Sbjct: 261 SYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRM 320
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-DMKKQGVVPNVLTYNTMISSACARSE 421
K C PD+ FY+ LI L++AGR+++A +F +M + GV N TYN+MI+ C E
Sbjct: 321 KRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHHDE 380
Query: 422 EENALKLLQKME-EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF-KNDVSMDAGTY 479
E+ A++LL++ME +LC PD TY PLL+ C ++ + + LL M K+ +S+D TY
Sbjct: 381 EDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDESTY 440
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
L++ L + E A FEEMIS+ I P H T +L E+++KK + + ERI ++
Sbjct: 441 TFLIQRLCRANMCEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIMKT 500
Query: 540 AK 541
K
Sbjct: 501 VK 502
>gi|125540181|gb|EAY86576.1| hypothetical protein OsI_07956 [Oryza sativa Indica Group]
gi|125582780|gb|EAZ23711.1| hypothetical protein OsJ_07414 [Oryza sativa Japonica Group]
gi|215768726|dbj|BAH00955.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 313 bits (803), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 254/420 (60%), Gaps = 5/420 (1%)
Query: 122 GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
G+ ++ ++V+ L +F +D A GFF WA+++ Y HT N MVD+LGK ++ MW
Sbjct: 77 GIRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMW 136
Query: 182 ELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
EL+ +M G V++ T++ +RRL R+ D V F ++ G+E++T ++VL+D
Sbjct: 137 ELLSDMH--GRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDV 194
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
L K +E A +VF IP + FNI +HGWC R++D+A ++EM ++GF P V
Sbjct: 195 LCKERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSV 254
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
++YT +E YC++++FR+V + L M +GC P+VITYT++M +L K ++ EAL V +
Sbjct: 255 ITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHR 314
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-DMKKQGVVPNVLTYNTMISSACARS 420
MKS C PDT FY+SLI +L K+G + +A+++F +M GV N+ TYNTMIS C
Sbjct: 315 MKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISIFCYYG 374
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKM-CCRKKRMKVLNFLLTHMF-KNDVSMDAGT 478
+++AL +L++ME CKPD ++Y PLL++ R+ + + LL+ + K+++ +D T
Sbjct: 375 RDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDT 434
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
Y L+ GL G A F+EM+S I P T ML ++ ++ + ERI ++
Sbjct: 435 YTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLDEAQRTNMETYVERIGNYMS 494
>gi|297599556|ref|NP_001047351.2| Os02g0601600 [Oryza sativa Japonica Group]
gi|255671066|dbj|BAF09265.2| Os02g0601600 [Oryza sativa Japonica Group]
Length = 466
Score = 313 bits (802), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 254/420 (60%), Gaps = 5/420 (1%)
Query: 122 GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
G+ ++ ++V+ L +F +D A GFF WA+++ Y HT N MVD+LGK ++ MW
Sbjct: 43 GIRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMW 102
Query: 182 ELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
EL+ +M G V++ T++ +RRL R+ D V F ++ G+E++T ++VL+D
Sbjct: 103 ELLSDMH--GRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDV 160
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
L K +E A +VF IP + FNI +HGWC R++D+A ++EM ++GF P V
Sbjct: 161 LCKERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSV 220
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
++YT +E YC++++FR+V + L M +GC P+VITYT++M +L K ++ EAL V +
Sbjct: 221 ITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHR 280
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-DMKKQGVVPNVLTYNTMISSACARS 420
MKS C PDT FY+SLI +L K+G + +A+++F +M GV N+ TYNTMIS C
Sbjct: 281 MKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISIFCYYG 340
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKM-CCRKKRMKVLNFLLTHMF-KNDVSMDAGT 478
+++AL +L++ME CKPD ++Y PLL++ R+ + + LL+ + K+++ +D T
Sbjct: 341 RDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDT 400
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
Y L+ GL G A F+EM+S I P T ML ++ ++ + ERI ++
Sbjct: 401 YTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLDEAQRTNMETYVERIGNYMS 460
>gi|47848296|dbj|BAD22160.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 454
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 157/420 (37%), Positives = 254/420 (60%), Gaps = 5/420 (1%)
Query: 122 GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
G+ ++ ++V+ L +F +D A GFF WA+++ Y HT N MVD+LGK ++ MW
Sbjct: 31 GIRLTGNIVDTLLFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMW 90
Query: 182 ELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
EL+ +M G V++ T++ +RRL R+ D V F ++ G+E++T ++VL+D
Sbjct: 91 ELLSDMH--GRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLEDMGLERNTETMNVLLDV 148
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
L K +E A +VF IP + FNI +HGWC R++D+A ++EM ++GF P V
Sbjct: 149 LCKERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSV 208
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
++YT +E YC++++FR+V + L M +GC P+VITYT++M +L K ++ EAL V +
Sbjct: 209 ITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHR 268
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-DMKKQGVVPNVLTYNTMISSACARS 420
MKS C PDT FY+SLI +L K+G + +A+++F +M GV N+ TYNTMIS C
Sbjct: 269 MKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISIFCYYG 328
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKM-CCRKKRMKVLNFLLTHMF-KNDVSMDAGT 478
+++AL +L++ME CKPD ++Y PLL++ R+ + + LL+ + K+++ +D T
Sbjct: 329 RDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLDLDT 388
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
Y L+ GL G A F+EM+S I P T ML ++ ++ + ERI ++
Sbjct: 389 YTLLIHGLCRVGDTVWAYQLFDEMVSSEIAPRSKTCVMLLDEAQRTNMETYVERIGNYMS 448
>gi|297828902|ref|XP_002882333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328173|gb|EFH58592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 506
Score = 311 bits (797), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 167/424 (39%), Positives = 256/424 (60%), Gaps = 9/424 (2%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
V++S+ LV + L RF +D A G WA++ G+ H+ + Y+ VD+LGK+KK W+
Sbjct: 81 VNLSDGLVYKLLHRFRDDWKSALGVLNWAESCKGHKHSNDAYDMAVDILGKAKK----WD 136
Query: 183 LVKEMDELNNG--YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
+K E G V+L T++ IMRR G +++AV F + ++G+EK+T ++++L+D
Sbjct: 137 RLKVFVERMRGDKLVTLNTIAKIMRRFAGAGEWEEAVGIFDKLGEFGLEKNTESMNLLLD 196
Query: 241 TLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
TL K VE A V LE K I ++ FNI IHGWCK +V++A ++EM GF P
Sbjct: 197 TLCKEKRVEQARVVLLELKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPC 256
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
V+SYT I YC++ +F KV + L EM+ G P+ ITYT +M +L K+ EAL+V
Sbjct: 257 VISYTTIIRCYCQQSEFVKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVAT 316
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-DMKKQGVVPNVLTYNTMISSACAR 419
+MK C PD+ FY+ LI L+++GR+++A +F +M + GV N TYN+MI+ C
Sbjct: 317 RMKRSGCQPDSLFYNCLIHTLARSGRLEEAERVFRVEMPELGVSINTSTYNSMIAMYCHH 376
Query: 420 SEEENALKLLQKME-EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF-KNDVSMDAG 477
EE+ A++LL++ME +LC PD TY PLL+ C ++ + + LL M K+ +S+D
Sbjct: 377 DEEDKAIELLKEMESSNLCNPDVHTYQPLLRSCFKRGDVVEVGKLLKEMVTKHHLSLDES 436
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
TY L++ L + E A FEEMIS+ I P H T +L E+++KK + + ERI ++
Sbjct: 437 TYTFLIQRLCRANICEWAYCLFEEMISQDITPRHRTCLLLLEEVKKKNMHESAERIEHIM 496
Query: 538 AHAK 541
K
Sbjct: 497 KTVK 500
>gi|413937640|gb|AFW72191.1| hypothetical protein ZEAMMB73_762171 [Zea mays]
Length = 503
Score = 301 bits (772), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 162/439 (36%), Positives = 269/439 (61%), Gaps = 8/439 (1%)
Query: 101 SKILSKQYQSPDKVVEALKG-CG-VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG-Y 157
S +L + S + +V AL C V +++ + + LR + PA GFF WA+++ G Y
Sbjct: 56 SSLLRARKGSVEDLVRALAAECSEVRLTSGVADSLLRGCGDCWKPALGFFLWAQSRGGGY 115
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
HTP + MVD+LGK+++ MW+L+ EM G V++ T++ +RRL ++ DA+
Sbjct: 116 SHTPYACSRMVDLLGKTRQIDRMWDLLSEMH--CRGLVTVDTVAKSIRRLAAARKWRDAI 173
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
F ++ G+E++T ++VL+D L K VE A +VF+ I + FNI +HGWC
Sbjct: 174 LLFDQLEDLGLERNTETMNVLLDALCKEKKVELAREVFVMLSPHIAPDAYTFNIFVHGWC 233
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
R++D+A ++EM +GF P V++YT +E YC++++FR+V + L M +GC P+VI
Sbjct: 234 SVRRIDEALWTIEEMKTRGFPPIVITYTAVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVI 293
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-D 396
TYT++M +L K ++ EAL V ++MKS C PDT FY++LI +L +AG + +AN++F +
Sbjct: 294 TYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVE 353
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP-LLKMCCRKK 455
M + GV+ NV TYNTMIS C +++AL +L++ME CKPD +TY P L + R+
Sbjct: 354 MPRNGVLRNVATYNTMISILCQYGRDDDALGVLKEMEAQSCKPDLQTYQPLLRLLLGRRG 413
Query: 456 RMKVLNFLLTHMF-KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ ++ LL+ + +N + +D TY L+ GL + G+ + A ++EM+ IVP T
Sbjct: 414 QAAAVHRLLSELRDRNGLGLDLDTYTLLIHGLCKVGETDWAYLLYDEMVGSEIVPRPRTC 473
Query: 515 KMLEEKLEKKRLGNAKERI 533
++L +++++ + ERI
Sbjct: 474 ELLLSEMQRQNMEAYVERI 492
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 296 bits (757), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 165/441 (37%), Positives = 266/441 (60%), Gaps = 8/441 (1%)
Query: 101 SKILSKQYQSPDKVVEALKG-CG-VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG-Y 157
S +L + S + +V L C V +++ + + LRR +D A GFF WA+++ G Y
Sbjct: 59 SSLLRARKGSVEDLVRTLAAECSEVRLTSGVADSLLRRCGDDWKSALGFFLWAQSRGGGY 118
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
HTP N MVD+LGK ++ MW+L+ EM G V++ T++ +RRL R+ DA+
Sbjct: 119 SHTPCACNRMVDLLGKMRQIDRMWDLLSEMH--CRGLVTVDTIAKSIRRLAAARRWRDAI 176
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
F ++ G+E++T ++VL+D L K VE A +VF+ I + FNI +HGWC
Sbjct: 177 LLFDQLEDLGLERNTETMNVLLDALCKERKVELAREVFVMLSPHIAPDAYTFNIFVHGWC 236
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
R++D+A ++EM +GF P V++YT +E YC++++FR+V + L M +GC P+VI
Sbjct: 237 SVRRIDEAMWTIEEMKNRGFPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVI 296
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYT++M +L K ++ EAL V ++MKS C PDT FY++LI +L +AG + +AN++F
Sbjct: 297 TYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVE 356
Query: 398 KKQGVVP-NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC-CRKK 455
+ VVP NV TYNTMIS C +++AL +L++ME CKPD +TY PLL++ R+
Sbjct: 357 MPRNVVPRNVATYNTMISILCQYGRDDDALDVLKEMEAQSCKPDLQTYQPLLRLLFGRRG 416
Query: 456 RMKVLNFLLTHMF-KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ ++ LL+ + +N + +D TY L+ GL G+ + A ++EM+ IVP T
Sbjct: 417 QTGAIHHLLSELRDRNGLGLDLDTYTLLIHGLCRVGETDWAYQLYDEMVGSEIVPRPKTC 476
Query: 515 KMLEEKLEKKRLGNAKERINK 535
++L + +++ + ERI
Sbjct: 477 ELLLSETQRQNMEVYVERIQN 497
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 251 bits (641), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 152/455 (33%), Positives = 236/455 (51%), Gaps = 15/455 (3%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
D D ISKIL + + + +L+ G+++S LV QTL R N A FF WAK Q
Sbjct: 52 DADLISKILLQHHNPFHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQA 111
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
+ H YN ++D+L K ++F + W+ + EMD+ N+ + T ++RR V G
Sbjct: 112 HHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQ-NSLEPTSTTFRILIRRSVSAGLTRQ 170
Query: 216 AVEAFRGMKKYGVEKDTRA--LSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
AV AF M + VEKD + L+DTL K V+ A ++F + K +++++ ILI
Sbjct: 171 AVRAFDDMSCF-VEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILI 229
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR----------EKDFRKVDDT 323
+GWCK +V A++ + EM ++G +VV+Y + CR E+ R +
Sbjct: 230 YGWCKINRVSIAERLLGEMVERGIEANVVTYNVLLNGICRRASLHPDDRFERTIRDAEKV 289
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
L EM++KG +P V +Y+IV+H +A + L MK P + Y+S++ L
Sbjct: 290 LDEMRQKGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCS 349
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL-CKPDCE 442
GR++DA E+ DM K GV P+ TYN R + +NAL+L +KM+E+ C PD
Sbjct: 350 CGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMH 409
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ M + RM+++ + M + D +Y L+ GL E K + AC FF EM
Sbjct: 410 TYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEM 469
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
I KG +P T++ L L + + R+ K L
Sbjct: 470 IEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKL 504
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 106/223 (47%), Gaps = 2/223 (0%)
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILI 273
DA + M++ G+E D + S+++ + + E KD I + + ++
Sbjct: 285 DAEKVLDEMRQKGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVV 344
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GC 332
C +++DA++ + +M + G SP +Y CF + Y KD ++M+E+ C
Sbjct: 345 KCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSC 404
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P + TY I++ K ++ ++++ MK+ PD Y+ LI L + + K+A
Sbjct: 405 LPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACH 464
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
F +M ++G +P +T+ T+ + +L +K+EE+
Sbjct: 465 FFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEE 507
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 151/455 (33%), Positives = 235/455 (51%), Gaps = 15/455 (3%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
D D ISKIL + + + +L+ G+++S LV QTL R N A FF WAK Q
Sbjct: 52 DADLISKILLQHHNPFHAMESSLQLNGIALSTHLVHQTLLRLRNVSKIALSFFLWAKDQA 111
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
+ H YN ++D+L K ++F + W+ + EMD+ N+ + T ++RR V G
Sbjct: 112 HHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQ-NSLEPTSTTFRILIRRSVSAGLTRQ 170
Query: 216 AVEAFRGMKKYGVEKDTRA--LSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
AV AF M + VEKD + L+DTL K V+ A ++F + K +++++ ILI
Sbjct: 171 AVRAFDDMSCF-VEKDADSDDFCYLLDTLSKYGYVKLASQIFNQRKFKFEANAKMYTILI 229
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR----------EKDFRKVDDT 323
+GWCK +V A++ + EM ++G +VV+Y + CR E+ R +
Sbjct: 230 YGWCKINRVSIAERLLGEMVERGJXANVVTYNVLLNGICRXASLHPDDRFERTIRDAEKV 289
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
L EM++ G +P V +Y+IV+H +A + L MK P + Y+S++ L
Sbjct: 290 LDEMRQXGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVVKCLCS 349
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL-CKPDCE 442
GR++DA E+ DM K GV P+ TYN R + +NAL+L +KM+E+ C PD
Sbjct: 350 CGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMH 409
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ M + RM+++ + M + D +Y L+ GL E K + AC FF EM
Sbjct: 410 TYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEM 469
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
I KG +P T++ L L + + R+ K L
Sbjct: 470 IEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKL 504
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 106/223 (47%), Gaps = 2/223 (0%)
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILI 273
DA + M++ G+E D + S+++ + + E KD I + + ++
Sbjct: 285 DAEKVLDEMRQXGIEPDVTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTSVV 344
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GC 332
C +++DA++ + +M + G SP +Y CF + Y KD ++M+E+ C
Sbjct: 345 KCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSC 404
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P + TY I++ K ++ ++++ MK+ PD Y+ LI L + + K+A
Sbjct: 405 LPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACH 464
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
F +M ++G +P +T+ T+ + +L +K+EE+
Sbjct: 465 FFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEEE 507
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 130/425 (30%), Positives = 226/425 (53%), Gaps = 2/425 (0%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
DV+K+ +IL K + K+ AL+ GV+V + L E+ L R + + FF WA Q
Sbjct: 56 ADVEKVYRILRKFHSRVPKLELALQESGVAVRSGLTERVLNRCGDAGNLGYRFFVWASKQ 115
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
GY H+ E+Y M+ +LGK ++F +W L++EM N +VS +MRR
Sbjct: 116 PGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRRFASARMVK 175
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
A+E M KYG E D L+D L K SV+ A +F + + + + F L++
Sbjct: 176 KAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLY 235
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
GWC+ K+ +A+ + ++ + GF PD+V Y + Y D LKEM+ K C+P
Sbjct: 236 GWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEP 295
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V+++T ++ AL K++ EA++V+ +M+S C D Y++LI K G++ E+
Sbjct: 296 NVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELL 355
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M +QG +PN +TY ++++ + E E ++L+++M + C PD Y ++++ C+
Sbjct: 356 DNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKL 415
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV--PYHS 512
+K + M +S T+ ++ G + L AC FF+EM+ +G++ P +
Sbjct: 416 GEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYG 475
Query: 513 TYKML 517
T K L
Sbjct: 476 TLKEL 480
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 98/277 (35%), Gaps = 73/277 (26%)
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQI 268
G+ DA + + M++ E + + + L+ L +E A +VF E + C P +
Sbjct: 275 AGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVT 334
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGF------------------------------- 297
+ LI G+CK K+ + + M QQG
Sbjct: 335 YTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMR 394
Query: 298 ----SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
+PD+ Y I C+ + ++ EM+ G P + T+ I++H + +
Sbjct: 395 KIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLV 454
Query: 354 EALKVYEKMKSDDCLP-----------------------------------DTSFYSSLI 378
EA + +++M L D + Y+ I
Sbjct: 455 EACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTI 514
Query: 379 FI--LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
+I L G VK+A DM GV+P T+ ++
Sbjct: 515 WIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLM 551
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 8/241 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y T++ K K +EL+ M + G++ + T IM + ++ +E
Sbjct: 335 YTTLISGFCKWGKISKGYELLDNM--IQQGHIPNPMTYLHIMAAHEKKEELEECIELMEE 392
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTR 280
M+K G D ++++ K ++ +V+ E + LS + F I+IHG+ R
Sbjct: 393 MRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEM-EATGLSPGLDTFVIMIHGFLSQR 451
Query: 281 KVDDAQKAMKEMFQQGF--SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ +A + KEM +G +P + + R + D + KGC +V
Sbjct: 452 CLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYA 511
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+TI +HAL + EA M +P ++ L+ L K + A EI E ++
Sbjct: 512 WTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAEITEKVR 571
Query: 399 K 399
K
Sbjct: 572 K 572
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 238 bits (607), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 144/495 (29%), Positives = 248/495 (50%), Gaps = 22/495 (4%)
Query: 41 SSTESPSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRIS-SRVL------SENH 93
S S S P W + +P + P + WV + +I+ SR+L S
Sbjct: 23 SDLSSESSPRW-HVLTTSTPISN---PLILKWVIPKTQIKSIQITDSRILVIKTAQSVKE 78
Query: 94 ETDVD---------KISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPA 144
E D+D + +IL K + K+ AL+ GV+V + L E+ L R +
Sbjct: 79 EEDLDLYAWKAIEKTVYRILRKFHSRVPKLELALQESGVAVRSGLTERVLNRCGDAGNLG 138
Query: 145 FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM 204
+ FF WA Q GY H+ E+Y M+ +LGK ++F +W L++EM N +VS +M
Sbjct: 139 YRFFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLM 198
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL 264
RR A+E M KYG E D L+D L K SV+ A +F + +
Sbjct: 199 RRFASARMVKKAIEVLDEMPKYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDMRIRFTP 258
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ + F L++GWC+ K+ +A+ + ++ + GF PD+V Y + Y D L
Sbjct: 259 TLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYDLL 318
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
KEM+ K C+P+V+++T ++ AL K++ EA++V+ +M+S C D Y++LI K
Sbjct: 319 KEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGFCKW 378
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G++ E+ ++M +QG +PN +TY ++++ + E E ++L+++M + C PD Y
Sbjct: 379 GKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIY 438
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
++++ C+ +K + M +S T+ ++ G + L AC FF+EM+
Sbjct: 439 NIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVG 498
Query: 505 KGIV--PYHSTYKML 517
+G++ P + T K L
Sbjct: 499 RGLLSAPQYGTLKEL 513
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/277 (19%), Positives = 98/277 (35%), Gaps = 73/277 (26%)
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQI 268
G+ DA + + M++ E + + + L+ L +E A +VF E + C P +
Sbjct: 308 AGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVT 367
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGF------------------------------- 297
+ LI G+CK K+ + + M QQG
Sbjct: 368 YTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMR 427
Query: 298 ----SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
+PD+ Y I C+ + ++ EM+ G P + T+ I++H + +
Sbjct: 428 KIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLV 487
Query: 354 EALKVYEKMKSDDCLP-----------------------------------DTSFYSSLI 378
EA + +++M L D + Y+ I
Sbjct: 488 EACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTI 547
Query: 379 FI--LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
+I L G VK+A DM GV+P T+ ++
Sbjct: 548 WIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLM 584
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 101/241 (41%), Gaps = 8/241 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y T++ K K +EL+ M + G++ + T IM + ++ +E
Sbjct: 368 YTTLISGFCKWGKISKGYELLDNM--IQQGHIPNPMTYLHIMAAHEKKEELEECIELMEE 425
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTR 280
M+K G D ++++ K ++ +V+ E + LS + F I+IHG+ R
Sbjct: 426 MRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEM-EATGLSPGLDTFVIMIHGFLSQR 484
Query: 281 KVDDAQKAMKEMFQQGF--SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ +A + KEM +G +P + + R + D + KGC +V
Sbjct: 485 CLVEACEFFKEMVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYA 544
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+TI +HAL + EA M +P ++ L+ L K + A EI E ++
Sbjct: 545 WTIWIHALFSNGHVKEACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAEITEKVR 604
Query: 399 K 399
K
Sbjct: 605 K 605
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 135/451 (29%), Positives = 239/451 (52%), Gaps = 6/451 (1%)
Query: 77 RLNEKSRISSRVLSENHET-DVDKISKILSKQYQSPDKVV--EALKGCGVSVSNSLVEQT 133
RL KS +S+R+ S + + DV ++K +SK S ++V AL G+ VS +VE
Sbjct: 12 RLCSKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVIDSALDQSGLRVSPEVVEDV 71
Query: 134 LRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG 193
L RF N A+ FF W++ Q Y H+ Y+ M++ K +++ LMW+L+ M +
Sbjct: 72 LYRFRNAGLLAYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAM--MKKK 129
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+++ T +MR+ R + D+A+ AF M+KY + + A + L+ L K +V A +
Sbjct: 130 MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQE 189
Query: 254 VFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+F +D S+ ++IL+ GW K + A++ +EM G PD+V+Y+ ++ C+
Sbjct: 190 IFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMVDAGSLPDIVTYSIMVDILCK 249
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ ++ M CKP+ Y++++H G ++ EA+ + +M+ D +
Sbjct: 250 AGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAV 309
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
++SLI K R+K+ + ++MK +GV PN + N ++ R E++ A + +KM
Sbjct: 310 FNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMI 369
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+ +C+PD +TY ++KM C KK M+ + + +M K V T++ L+ GL E +
Sbjct: 370 K-VCEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNTQ 428
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
AC EEMI GI P +T+ L + L K+
Sbjct: 429 KACVLLEEMIEMGIRPSGATFGRLRQLLLKE 459
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 127/250 (50%), Gaps = 4/250 (1%)
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILI 273
A E FR M G D S+++D L K V+ A + ++ C P ++ I+++L+
Sbjct: 221 AREVFREMVDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKP-TTFIYSVLV 279
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
H + ++++A EM + G DV + I +C+ + V LKEM+ KG
Sbjct: 280 HTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVT 339
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ + I++ L + +EA V+ KM C PD Y+ +I + + ++ A+++
Sbjct: 340 PNSKSCNIILRHLIDRGEKDEAFDVFRKM-IKVCEPDADTYTMMIKMFCEKKEMETADKV 398
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
++ M+K+GV P++ T++ +I+ C + A LL++M E +P T+ L ++ +
Sbjct: 399 WKYMRKKGVFPSMHTFSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGATFGRLRQLLLK 458
Query: 454 KKRMKVLNFL 463
+ R VL FL
Sbjct: 459 EDREDVLKFL 468
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 9/288 (3%)
Query: 160 TPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
TP+ Y+ +++ GK E+ +EM ++ G + + T S ++ L + GR D+A
Sbjct: 199 TPDSKTYSILLEGWGKEPNLPKAREVFREM--VDAGSLPDIVTYSIMVDILCKAGRVDEA 256
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHG 275
+ R M + T SVL+ T +E A FLE + + +FN LI
Sbjct: 257 LGIVRSMDPSICKPTTFIYSVLVHTYGTETRLEEAVDTFLEMERSGMKADVAVFNSLIGA 316
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+CKT ++ + + +KEM +G +P+ S + H + + D ++M K C+P
Sbjct: 317 FCKTNRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIDRGEKDEAFDVFRKMI-KVCEPD 375
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
TYT+++ + K++ A KV++ M+ P +S LI L + + A + E
Sbjct: 376 ADTYTMMIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEEPNTQKACVLLE 435
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLL-QKMEEDLCKPDCE 442
+M + G+ P+ T+ + + + E+ LK L +KM + +P C+
Sbjct: 436 EMIEMGIRPSGATFGRL-RQLLLKEDREDVLKFLNEKMNVLVNEPLCD 482
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 237 bits (604), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/408 (31%), Positives = 215/408 (52%), Gaps = 3/408 (0%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKK 176
AL GV VS LVE L+RF N PAF FF WA+ Q GY H+ Y+ M++ L K ++
Sbjct: 34 ALNQTGVRVSPDLVENVLKRFENAGMPAFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQ 93
Query: 177 FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALS 236
+ ++W+LV M + G +++ T +MR+ R + D+AV F M KY V + A +
Sbjct: 94 YQIVWDLVSAMRK--KGMLNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVPNLAAFN 151
Query: 237 VLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L+ L K N+V A ++F K + ++IL+ GW K + A++ +EM + G
Sbjct: 152 GLLSALCKSNNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAG 211
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
PDVV+Y ++ C+ + + +KEM C+P+ Y++++H G +I +A+
Sbjct: 212 CDPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAI 271
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ +M D Y++LI K + K+ + + ++M+ GV PN T N +ISS
Sbjct: 272 DTFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSM 331
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
+ + + A ++ +M + LC+PD +TY ++KM C K +++ + +M
Sbjct: 332 IGQGQTDRAFRVFCRMIK-LCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSM 390
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
T+++L++GL E AC EEMI KGI P T+ L + L K+
Sbjct: 391 HTFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKE 438
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 38/235 (16%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y MVDVL K+ + E+VKEMD + N + S ++ R +DA++ F M
Sbjct: 219 YGIMVDVLCKAGRVDEAVEVVKEMD-VGNCRPTSFIYSVLVHTYGVEHRIEDAIDTFLEM 277
Query: 224 KKYGVEKD-----------------------------------TRALSVLMDTLVKGNSV 248
K G++ D +R +V++ +++
Sbjct: 278 AKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMIGQGQT 337
Query: 249 EHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
+ A++VF K C P + + ++I +C+ +++ A K K M + F P + +++
Sbjct: 338 DRAFRVFCRMIKLCEP-DADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMHTFSAL 396
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
I+ C + + K ++EM EKG +PS IT+ + L K + + ++EKM
Sbjct: 397 IKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLKFLHEKM 451
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 236 bits (601), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 132/412 (32%), Positives = 220/412 (53%), Gaps = 11/412 (2%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKK 176
AL GV VS +VE L++F N A+ FF WA+ Q Y H+ + ++T++D L K ++
Sbjct: 12 ALDQSGVRVSEQIVEDVLKKFENAGMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQ 71
Query: 177 FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALS 236
+ LMW++VK M + V++ T IMR+ R + ++AV F M KY V + A +
Sbjct: 72 YQLMWDVVKVMK--SKRMVNVETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPPNLAAFN 129
Query: 237 VLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L+ L K +V A ++F KD S+ ++IL+ GW K + A++ +EM G
Sbjct: 130 GLLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNG 189
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
PD+V+Y ++ C+ + + EM CKP+ Y++++H G +I +A+
Sbjct: 190 CRPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAV 249
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ +M+++ PD + Y++LI KA R+K+ + +M +GV PN T+N ++SS
Sbjct: 250 STFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSL 309
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR----KKRMKVLNFLLTHMFKNDV 472
R E + A ++ +M + +C+PD +TY ++KM C KK +KV ++ F +
Sbjct: 310 IGRGETDEAYRVFLRMIK-VCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSM 368
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
T+ L+ GL E G + AC EEMI KGI P T+ L + L K+
Sbjct: 369 H----TFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKE 416
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 5/225 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y MVDVL K+ + +V EMD S ++ R +DAV F M
Sbjct: 197 YGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPF-IYSVLVHTYGIENRIEDAVSTFLEM 255
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRK 281
+ G+E D + L+ K N +++ Y+V E DC + +S+ FNI++ +
Sbjct: 256 ENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEM-DCKGVTPNSRTFNIILSSLIGRGE 314
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
D+A + M + PD +YT I+ +C + +K K M+ K PS+ T+ +
Sbjct: 315 TDEAYRVFLRMIKVC-EPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMHTFQV 373
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
+++ L + + +A + E+M P + L +L K GR
Sbjct: 374 LINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGR 418
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 134/426 (31%), Positives = 222/426 (52%), Gaps = 1/426 (0%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V++IS+ILS Q + +L +S +LVEQ L+R N A FF WAK G
Sbjct: 48 VNEISRILSDQRNPHHDLETSLNAFSSEISTNLVEQVLKRCKNLGFSAHRFFLWAKRIPG 107
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ H+ E Y+ +V++LG S++F ++W+ + EM E ++ ++ + + R R DA
Sbjct: 108 FEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRANLPSDA 167
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
+ AF M ++G+ L L+ L K V+ A + F K ++ ++IL+ GW
Sbjct: 168 IRAFDRMAEFGLRPSVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKAKTYSILVRGW 227
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ +A+K EM +G + DV++Y +E C+ + + +E+ G +P
Sbjct: 228 GDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFREIGSHGVEPDA 287
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+Y I + A +A I+ V ++MK D +P+ Y+ +I L K G+V+DA ++ +
Sbjct: 288 CSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGKVEDAYQLLHE 347
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M ++GV P+ +YNT+++ C SE A KL+ M +D C PD +Y LLK+ R R
Sbjct: 348 MMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNMLLKLLVRVGR 407
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFFEEMISKGIVPYHSTYK 515
+ M + TY+ ++ GL + GKLE AC +FE MI +GI PY ST +
Sbjct: 408 FDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEACRYFETMIDEGIPPYASTIE 467
Query: 516 MLEEKL 521
ML +L
Sbjct: 468 MLRNRL 473
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 235 bits (600), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 219/408 (53%), Gaps = 3/408 (0%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKK 176
AL G+ +S + E LRRF N A+ FF WA Q Y+H+ Y++M++ L K ++
Sbjct: 12 ALDQTGIRISPEIAEPVLRRFENAGMLAYRFFEWASKQRNYVHSVRAYHSMIESLAKIRQ 71
Query: 177 FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALS 236
+ ++W+LV M N +++ IMR+ R + ++AV F M+KY ++ + A +
Sbjct: 72 YQMVWDLVNAMR--NKEILNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNMKPNVAAFN 129
Query: 237 VLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L+ L K +V A ++F KD S+ ++ILI GW + + A++ +EM G
Sbjct: 130 GLLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLPKAREIYREMIDSG 189
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
PD V+Y+ ++ C+ + + +KEM CKPS Y++++H G +I +A+
Sbjct: 190 CIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAV 249
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ +M+ + + D + Y++LI KA ++K+ + +DM +GV PN T N +I+S
Sbjct: 250 STFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSL 309
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
R E + A K+ ++M + +C+PD ++Y ++KM C +K + + + +M K
Sbjct: 310 IGRGETDEAFKIFRRMIK-VCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSM 368
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
T++ L+ GL + G AC EEMI KGI P +T+ L L K+
Sbjct: 369 HTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKE 416
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 149/307 (48%), Gaps = 8/307 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRG 222
+N ++ L KSK E+ D + + +V + T S ++ R A E +R
Sbjct: 128 FNGLLSALCKSKNVRKAQEI---FDNMKDQFVPDSKTYSILIEGWGRAPNLPKAREIYRE 184
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M G D S+++D L K V+ A ++ +++ +C P SS I+++L+H +
Sbjct: 185 MIDSGCIPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKP-SSFIYSVLVHTYGVEN 243
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+++DA EM + G DV +Y I +C+ + V LK+M KG P+ T
Sbjct: 244 RIEDAVSTFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCN 303
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I++++L + +EA K++ +M C PD Y+ +I + + A +I++ MKK+
Sbjct: 304 IIINSLIGRGETDEAFKIFRRM-IKVCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKK 362
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
VP++ T++ +I+ C A LL++M E +P T+ L + ++ R VL
Sbjct: 363 QFVPSMHTFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIKEGRKDVL 422
Query: 461 NFLLTHM 467
FL M
Sbjct: 423 KFLQEKM 429
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 236/447 (52%), Gaps = 6/447 (1%)
Query: 81 KSRISSRVLSENHET-DVDKISKILSKQYQSPDKVV--EALKGCGVSVSNSLVEQTLRRF 137
KS +S+R+ S + + DV ++K +SK S ++V AL G+ VS +VE L RF
Sbjct: 51 KSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRF 110
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
N + FF W++ Q Y H+ Y+ M++ K +++ LMW+L+ M + +++
Sbjct: 111 RNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRK--KKMLNV 168
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T +MR+ R + D+A+ AF M+KY + + A + L+ L K +V A +VF
Sbjct: 169 ETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFEN 228
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+D S+ ++IL+ GW K + A++ +EM G PD+V+Y+ ++ C+
Sbjct: 229 MRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 288
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ ++ M CKP+ Y++++H G ++ EA+ + +M+ D + ++SL
Sbjct: 289 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 348
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I KA R+K+ + ++MK +GV PN + N ++ R E++ A + +KM + +C
Sbjct: 349 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VC 407
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
+PD +TY ++KM C KK M+ + + +M K V T++ L+ GL E + AC
Sbjct: 408 EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACV 467
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKK 524
EEMI GI P T+ L + L K+
Sbjct: 468 LLEEMIEMGIRPSGVTFGRLRQLLIKE 494
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 9/288 (3%)
Query: 160 TPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDDA 216
TP+ Y+ +++ GK E+ +EM ++ G + + T S ++ L + GR D+A
Sbjct: 234 TPDSKTYSILLEGWGKEPNLPKAREVFREM--IDAGCHPDIVTYSIMVDILCKAGRVDEA 291
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHG 275
+ R M + T SVL+ T N +E A FLE + + +FN LI
Sbjct: 292 LGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGA 351
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+CK ++ + + +KEM +G +P+ S + H + + D ++M K C+P
Sbjct: 352 FCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPD 410
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
TYT+V+ + K++ A KV++ M+ P +S LI L + + A + E
Sbjct: 411 ADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLE 470
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLL-QKMEEDLCKPDCE 442
+M + G+ P+ +T+ + + E E+ LK L +KM + +P C+
Sbjct: 471 EMIEMGIRPSGVTFGRL-RQLLIKEEREDVLKFLNEKMNVLVNEPLCD 517
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 134/447 (29%), Positives = 236/447 (52%), Gaps = 6/447 (1%)
Query: 81 KSRISSRVLSENHET-DVDKISKILSKQYQSPDKVV--EALKGCGVSVSNSLVEQTLRRF 137
KS +S+R+ S + + DV ++K +SK S ++V AL G+ VS +VE L RF
Sbjct: 15 KSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQSGLRVSQEVVEDVLNRF 74
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
N + FF W++ Q Y H+ Y+ M++ K +++ LMW+L+ M + +++
Sbjct: 75 RNAGLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWDLINAMRK--KKMLNV 132
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T +MR+ R + D+A+ AF M+KY + + A + L+ L K +V A +VF
Sbjct: 133 ETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPPNLVAFNGLLSALCKSKNVRKAQEVFEN 192
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+D S+ ++IL+ GW K + A++ +EM G PD+V+Y+ ++ C+
Sbjct: 193 MRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCHPDIVTYSIMVDILCKAGRV 252
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ ++ M CKP+ Y++++H G ++ EA+ + +M+ D + ++SL
Sbjct: 253 DEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSL 312
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I KA R+K+ + ++MK +GV PN + N ++ R E++ A + +KM + +C
Sbjct: 313 IGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMIK-VC 371
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
+PD +TY ++KM C KK M+ + + +M K V T++ L+ GL E + AC
Sbjct: 372 EPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACV 431
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKK 524
EEMI GI P T+ L + L K+
Sbjct: 432 LLEEMIEMGIRPSGVTFGRLRQLLIKE 458
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 138/288 (47%), Gaps = 9/288 (3%)
Query: 160 TPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDDA 216
TP+ Y+ +++ GK E+ +EM ++ G + + T S ++ L + GR D+A
Sbjct: 198 TPDSKTYSILLEGWGKEPNLPKAREVFREM--IDAGCHPDIVTYSIMVDILCKAGRVDEA 255
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHG 275
+ R M + T SVL+ T N +E A FLE + + +FN LI
Sbjct: 256 LGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDTFLEMERSGMKADVAVFNSLIGA 315
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+CK ++ + + +KEM +G +P+ S + H + + D ++M K C+P
Sbjct: 316 FCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIERGEKDEAFDVFRKMI-KVCEPD 374
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
TYT+V+ + K++ A KV++ M+ P +S LI L + + A + E
Sbjct: 375 ADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHTFSVLINGLCEERTTQKACVLLE 434
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLL-QKMEEDLCKPDCE 442
+M + G+ P+ +T+ + + E E+ LK L +KM + +P C+
Sbjct: 435 EMIEMGIRPSGVTFGRL-RQLLIKEEREDVLKFLNEKMNVLVNEPLCD 481
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 139/442 (31%), Positives = 225/442 (50%), Gaps = 3/442 (0%)
Query: 83 RISSRVLSENHETD-VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDL 141
RI S +L + D V++IS++LS D + L VS++LVEQ L+R N
Sbjct: 23 RIFSTLLHDPPSPDLVNEISRVLSDHRNPKDDLEHTLVAYSPRVSSNLVEQVLKRCKNLG 82
Query: 142 TPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS 201
PA FF WA+ + H+ E Y+ +V++LG SK+F L+W+ + E E N +S
Sbjct: 83 FPAHRFFLWARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFW 142
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD- 260
+ R R +A AF M ++G++ L L+ +L V HA + F + K
Sbjct: 143 IVFRAYSRANLPSEACRAFNRMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGF 202
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
I S++ ++IL+ GW + R A+K EM ++ D+++Y ++ C+ D
Sbjct: 203 GIVPSAKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGG 262
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+EM G KP ++ I +HA A ++ A KV ++MK D +P+ ++ +I
Sbjct: 263 YKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKT 322
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K +V DA + ++M ++G P+ TYN++++ C E A KLL +M+ C PD
Sbjct: 323 LCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPD 382
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFF 499
TY +LK+ R R + M + TY ++ GL+ + GKLE AC +F
Sbjct: 383 RHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYF 442
Query: 500 EEMISKGIVPYHSTYKMLEEKL 521
E MI +GI PY +T +ML +L
Sbjct: 443 EMMIDEGIPPYSTTVEMLRNRL 464
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 129/290 (44%), Gaps = 6/290 (2%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF AK G + + + Y+ +V + + ++ EM E N V L + ++
Sbjct: 195 FFGKAKG-FGIVPSAKTYSILVRGWARIRDASGARKVFDEMLE-RNCVVDLLAYNALLDA 252
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPL 264
L + G D + F+ M G++ D + ++ + V AYKV K D +P
Sbjct: 253 LCKSGDVDGGYKMFQEMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVP- 311
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ FN +I CK KVDDA + EM Q+G +PD +Y + ++C + + L
Sbjct: 312 NVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLL 371
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF-ILSK 383
M C P TY +V+ L + + + A +++E M P + Y+ +I ++ K
Sbjct: 372 SRMDRTKCLPDRHTYNMVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRK 431
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
G++++A FE M +G+ P T + + + + L KME
Sbjct: 432 KGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKME 481
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 234 bits (598), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 229/437 (52%), Gaps = 7/437 (1%)
Query: 88 VLSENHE----TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTP 143
V E HE DV+KI +IL + K+ +L G+ + L+ + L R +
Sbjct: 57 VFPEKHEDEFAGDVEKIYRILRNYHSRVPKLELSLNESGIDLRPGLIVRVLSRCGDAGNL 116
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
+ FF WA Q GY H+ E+ +MV +L K ++F +W L++EM + N + +
Sbjct: 117 GYRFFLWATKQPGYCHSYEVCKSMVKILSKMRQFGAVWGLIEEMRKENPELIEPELFVVL 176
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
+RR AVE M KYG E D L+D L K SV+ A KVF + ++ IP
Sbjct: 177 IRRFASANMVKKAVEVLDEMPKYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDMREKIP 236
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ + F L++GWC+ K+ +A++ + +M + G PD+V +T + Y D
Sbjct: 237 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 296
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKA-KQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L +M+++G +P+ YT+++ AL + K+++EA++V+ +M+ C D Y++LI
Sbjct: 297 LNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 356
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K G + + +DM+K+GV+P+ +TY ++ + + + E L+L++KM++ C PD
Sbjct: 357 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLL 416
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y ++++ C + +K L M N +S A + ++ G G L ACS F+EM
Sbjct: 417 IYNVVIRLACNFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEM 476
Query: 503 ISKGI--VPYHSTYKML 517
+S+GI P + T K L
Sbjct: 477 VSRGIFSAPQYGTLKSL 493
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 113/336 (33%), Gaps = 95/336 (28%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
L P FT +GY H +M + D+L +K GY A
Sbjct: 270 LEPDIVVFT--NLLSGYAHAGKMADAY-DLLNDMRK---------------RGYEPNANC 311
Query: 201 STIM-RRLVRG-GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--- 255
T++ + L R R D+A+ F M++YG E D + L+ K ++ Y V
Sbjct: 312 YTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDM 371
Query: 256 ----------------------LEFKDCIPLSSQ-----------IFNILIHGWCKTRKV 282
+F++C+ L + I+N++I C R+V
Sbjct: 372 RKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGCHPDLLIYNVVIRLACNFREV 431
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG----------- 331
+A + EM G SP + I + + + KEM +G
Sbjct: 432 KEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEACSHFKEMVSRGIFSAPQYGTLK 491
Query: 332 ----------------------------CKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
C+ +V +TI +HAL + EA M
Sbjct: 492 SLLNTLLRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALFAKGHVKEACSYCLDMM 551
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
D +P + Y L+ L+K A EI E + K
Sbjct: 552 EMDLMPQPNTYVKLMKGLNKLYNRTIAAEITEKVMK 587
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 234 bits (598), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 138/454 (30%), Positives = 236/454 (51%), Gaps = 13/454 (2%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
D + +S+IL + + +L+ G+++S+SL+ QTL R ++ A FF ++ +
Sbjct: 38 DAEIVSEILLNHHNPFHAMESSLQLHGITLSSSLLHQTLLRLRHNSKIALSFFHYSLSLP 97
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
YN ++D+L K ++F + W+L+ +MD+ NN + T ++RRL+ G
Sbjct: 98 SSSVNTTTYNLIIDILSKVRQFDVSWQLIIQMDQ-NNLQPNSHTFLILIRRLISAGFTRQ 156
Query: 216 AVEAFRGMKKYGVEKDTRA-LSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
A+ AF M+ + E + L+DTL K ++ A +VF + K + +I+ +LI+
Sbjct: 157 AIRAFDDMESFIAETVNQTHFCFLLDTLCKYGYIKVAVEVFNKRKFRFLPNVRIYTVLIY 216
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR----------EKDFRKVDDTL 324
GWCK ++D A++ ++EM + G +VV+Y ++ CR E+ K D
Sbjct: 217 GWCKIGRIDMAERFIREMDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVF 276
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
EM++KG +P V +++I++H +A + + + M+ P + Y+S++ L
Sbjct: 277 DEMRQKGIEPDVTSFSILLHVYSRAHKPQLTVDKLKLMEEMGICPTVATYTSVLKCLCSC 336
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM-EEDLCKPDCET 443
GR+ DA E+ E M + GV PN TYN R + E ALKL +K+ +E+LC P T
Sbjct: 337 GRIDDAEELLEQMVRNGVSPNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHT 396
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y LL M + R ++N + + + D +Y LV GL E K + AC FF EMI
Sbjct: 397 YNILLGMFMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMI 456
Query: 504 SKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
KG++P +T++ML L + + R+ K L
Sbjct: 457 EKGLLPQKATFEMLYAGLIQSNMLRTWRRLKKKL 490
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 148/330 (44%), Gaps = 32/330 (9%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWA-----KTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV 184
V QT F D +G+ A K + ++ +Y ++ K + + +
Sbjct: 172 VNQTHFCFLLDTLCKYGYIKVAVEVFNKRKFRFLPNVRIYTVLIYGWCKIGRIDMAERFI 231
Query: 185 KEMDELN---NGYVSLATMSTIMRR--LVRGGRYDDAV----EAFRGMKKYGVEKDTRAL 235
+EMDE+ N + I RR L GR++ + + F M++ G+E D +
Sbjct: 232 REMDEMGIEANVVTYNVLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSF 291
Query: 236 SVLMDTLVKGNSVE---HAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
S+L+ + + + K+ E C +++ + ++ C ++DDA++ +++M
Sbjct: 292 SILLHVYSRAHKPQLTVDKLKLMEEMGICPTVAT--YTSVLKCLCSCGRIDDAEELLEQM 349
Query: 293 FQQGFSPDVVSYTCFIEHYCREKD-------FRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ G SP+ +Y CF + Y KD +RK+ QE C PSV TY I++
Sbjct: 350 VRNGVSPNAATYNCFFKEYRGRKDPETALKLYRKIR------QENLCDPSVHTYNILLGM 403
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K + N +++ ++S PD Y+ L+ L + + + A + F +M ++G++P
Sbjct: 404 FMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQ 463
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEED 435
T+ + + + +L +K++E+
Sbjct: 464 KATFEMLYAGLIQSNMLRTWRRLKKKLDEE 493
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 234 bits (597), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 229/437 (52%), Gaps = 7/437 (1%)
Query: 88 VLSENHE----TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTP 143
V E HE +V+KI +IL + K+ AL G+ + L+ + L R +
Sbjct: 54 VCPEKHEDEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNL 113
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
+ FF WA Q GY H+ E+ +MV +L K ++F +W L++EM + N + +
Sbjct: 114 GYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVL 173
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
MRR AVE M KYG+E D L+D L K SV+ A KVF + ++ P
Sbjct: 174 MRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFP 233
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ + F L++GWC+ K+ +A++ + +M + G PD+V +T + Y D
Sbjct: 234 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 293
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKA-KQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+ +M+++G +P+V YT+++ AL + K+++EA++V+ +M+ C D Y++LI
Sbjct: 294 MNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 353
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K G + + +DM+K+GV+P+ +TY ++ + + + E L+L++KM+ C PD
Sbjct: 354 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 413
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y ++++ C+ +K L M N +S T+ ++ G G L AC+ F+EM
Sbjct: 414 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Query: 503 ISKGI--VPYHSTYKML 517
+S+GI P + T K L
Sbjct: 474 VSRGIFSAPQYGTLKSL 490
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 160/369 (43%), Gaps = 42/369 (11%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L ++++ R G+ +A E MK+ G+E D + L+ + AY +
Sbjct: 235 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKT-RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ K + + +LI C+T +++D+A + EM + G D+V+YT I +C+
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
K L +M++KG PS +TY +M A K +Q E L++ EKMK C PD
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ +I + K G VK+A ++ +M+ G+ P V T+ MI+ ++ A ++M
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474
Query: 434 ED--LCKPDCETYAPLLKMCCRKKRMKV----------------LNF----LLTH----- 466
P T LL R ++++ LN + H
Sbjct: 475 SRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAK 534
Query: 467 ------------MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
M + D+ TYA L++GL + +A E+++ K ++
Sbjct: 535 GHVKEACSYCLDMMEMDLMPQPNTYAKLMKGLNKLYNRTIAAEITEKVV-KMASEREMSF 593
Query: 515 KMLEEKLEK 523
KM ++K E+
Sbjct: 594 KMYKKKGEE 602
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 108/222 (48%), Gaps = 2/222 (0%)
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
+ + + +K + L EM + G +P + ++ AL K + EA KV+E M+
Sbjct: 170 FVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMR 229
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
+ P+ +++SL++ + G++ +A E+ MK+ G+ P+++ + ++S +
Sbjct: 230 -EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCR-KKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+A L+ M + +P+ Y L++ CR +KRM + M + D TY +L
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ G + G ++ S ++M KG++P TY + EKK
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKK 390
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 132/437 (30%), Positives = 229/437 (52%), Gaps = 7/437 (1%)
Query: 88 VLSENHE----TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTP 143
V E HE +V+KI +IL + K+ AL G+ + L+ + L R +
Sbjct: 54 VCPEKHEDEFAGEVEKIYRILRNHHSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNL 113
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
+ FF WA Q GY H+ E+ +MV +L K ++F +W L++EM + N + +
Sbjct: 114 GYRFFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVL 173
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
MRR AVE M KYG+E D L+D L K SV+ A KVF + ++ P
Sbjct: 174 MRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDMREKFP 233
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ + F L++GWC+ K+ +A++ + +M + G PD+V +T + Y D
Sbjct: 234 PNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDL 293
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKA-KQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+ +M+++G +P+V YT+++ AL + K+++EA++V+ +M+ C D Y++LI
Sbjct: 294 MNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFC 353
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K G + + +DM+K+GV+P+ +TY ++ + + + E L+L++KM+ C PD
Sbjct: 354 KWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLL 413
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y ++++ C+ +K L M N +S T+ ++ G G L AC+ F+EM
Sbjct: 414 IYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEM 473
Query: 503 ISKGI--VPYHSTYKML 517
+S+GI P + T K L
Sbjct: 474 VSRGIFSAPQYGTLKSL 490
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 143/332 (43%), Gaps = 41/332 (12%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L ++++ R G+ +A E MK+ G+E D + L+ + AY +
Sbjct: 235 NLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMADAYDLM 294
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKT-RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ K + + +LI C+T +++D+A + EM + G D+V+YT I +C+
Sbjct: 295 NDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTALISGFCK 354
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
K L +M++KG PS +TY +M A K +Q E L++ EKMK C PD
Sbjct: 355 WGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGCHPDLLI 414
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS---------ACARSEEEN 424
Y+ +I + K G VK+A ++ +M+ G+ P V T+ MI+ AC +E
Sbjct: 415 YNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACNHFKEMV 474
Query: 425 ALKLLQ--------------------KMEEDL----------CKPDCETYAPLLKMCCRK 454
+ + +M +D+ C+ + + + K
Sbjct: 475 SRGIFSAPQYGTLKSLLNNLVRDDKLEMAKDVWSCISNKTSSCELNVSAWTIWIHALYAK 534
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+K M + D+ TYA L++GL
Sbjct: 535 GHVKEACSYCLDMMEMDLMPQPNTYAKLMKGL 566
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 113/231 (48%), Gaps = 5/231 (2%)
Query: 298 SPDVVS---YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
+P+++ + + + +K + L EM + G +P + ++ AL K + E
Sbjct: 161 NPELIEPELFVVLMRRFASANMVKKAVEVLDEMPKYGLEPDEYVFGCLLDALCKNGSVKE 220
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A KV+E M+ + P+ +++SL++ + G++ +A E+ MK+ G+ P+++ + ++S
Sbjct: 221 ASKVFEDMR-EKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLS 279
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR-KKRMKVLNFLLTHMFKNDVS 473
+ +A L+ M + +P+ Y L++ CR +KRM + M +
Sbjct: 280 GYAHAGKMADAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCE 339
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
D TY +L+ G + G ++ S ++M KG++P TY + EKK
Sbjct: 340 ADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKK 390
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/263 (20%), Positives = 92/263 (34%), Gaps = 75/263 (28%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---------------- 255
R D+A+ F M++YG E D + L+ K ++ Y V
Sbjct: 322 RMDEAMRVFVEMERYGCEADIVTYTALISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYM 381
Query: 256 ---------LEFKDCIPLSSQ-----------IFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
+F++C+ L + I+N++I CK +V +A + EM
Sbjct: 382 QIMVAHEKKEQFEECLELIEKMKRRGCHPDLLIYNVVIRLACKLGEVKEAVRLWNEMEAN 441
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG------------------------ 331
G SP V ++ I + + + + KEM +G
Sbjct: 442 GLSPGVDTFVIMINGFTSQGFLIEACNHFKEMVSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
Query: 332 ---------------CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
C+ +V +TI +HAL + EA M D +P + Y+
Sbjct: 502 MAKDVWSCISNKTSSCELNVSAWTIWIHALYAKGHVKEACSYCLDMMEMDLMPQPNTYAK 561
Query: 377 LIFILSKAGRVKDANEIFEDMKK 399
L+ L+K A EI E + K
Sbjct: 562 LMKGLNKLYNRTIAAEITEKVVK 584
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 233 bits (594), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 128/430 (29%), Positives = 231/430 (53%), Gaps = 10/430 (2%)
Query: 96 DVDKISKILSKQYQSPDKVVEALK-GCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
D I ++LSK +P+ +E L G VS +LV + L+R SN A FF WA+ Q
Sbjct: 84 DTRNICRLLSK---NPNSSIEKLLLGASFKVSPALVLEVLKRLSNAGALALSFFKWAEKQ 140
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G+M+ E YN ++D LGK K+F ++W LV +M G ++ T + I RR R G+
Sbjct: 141 KGFMYNTESYNALIDSLGKIKQFNMIWNLVNDMKR--KGVLTKETFALISRRYARSGKVK 198
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
+A+ F M+K+G++ ++ + L+DTL+K V A VF ++ + +P + + IL
Sbjct: 199 EAMNTFEKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVP-DIKSYTIL 257
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+ GW + + + + +EM +GF PDVV+Y I YC+ + + + +EM+ K C
Sbjct: 258 LEGWGQEKNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNC 317
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+PS + +++ LG ++++EAL+ + + K+ P+T Y++++ + R+ DA
Sbjct: 318 QPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYR 377
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM-EEDLCKPDCETYAPLLKMC 451
+ ++M+K GV PN TY+ ++ + A + +KM E+ C+P TY +++M
Sbjct: 378 MVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMF 437
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C +++ + M V ++ L+ L KL++AC +F+EM+ GI P
Sbjct: 438 CNMDKVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDVGIRPPA 497
Query: 512 STYKMLEEKL 521
+ + L++ L
Sbjct: 498 ALFSHLKQAL 507
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/274 (21%), Positives = 127/274 (46%), Gaps = 5/274 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +++ G+ K + E+ +EM + G+ + T ++ + +YDDA+E FR
Sbjct: 254 YTILLEGWGQEKNLLKLDEVYREMKD--EGFEPDVVTYGILINAYCKVRKYDDAIELFRE 311
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRK 281
M+ + L++ L + A + F K + +N ++ +C + +
Sbjct: 312 MESKNCQPSPHIFCTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMR 371
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ-EKGCKPSVITYT 340
+DDA + + EM + G P+ +Y + H + + + ++M E+ C+P+V TY
Sbjct: 372 IDDAYRMVDEMRKSGVGPNSRTYDIILHHLIKAEKTTEAFSVFEKMSSEEECEPTVSTYD 431
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I++ ++ A+KV+++MK+ P +S LI L ++ A + F++M
Sbjct: 432 IIVRMFCNMDKVESAIKVWDRMKAKGVHPGMHMFSILINSLCHENKLDIACKYFQEMLDV 491
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
G+ P ++ + + ++ + L QK+++
Sbjct: 492 GIRPPAALFSHLKQALIEDGRKDTVVLLAQKIDK 525
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 122/259 (47%), Gaps = 1/259 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+++ +N LI K ++ + + +M ++G ++ Y R ++ +T
Sbjct: 146 NTESYNALIDSLGKIKQFNMIWNLVNDMKRKGVLTKE-TFALISRRYARSGKVKEAMNTF 204
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
++M++ G K + ++ L K++Q+ A V++KMK +PD Y+ L+ +
Sbjct: 205 EKMEKFGLKIESTDFNRLLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQE 264
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
+ +E++ +MK +G P+V+TY +I++ C + ++A++L ++ME C+P +
Sbjct: 265 KNLLKLDEVYREMKDEGFEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIF 324
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ +R+ + + + TY ++V S +++ A +EM
Sbjct: 325 CTLINGLGSVRRLSEALEFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRK 384
Query: 505 KGIVPYHSTYKMLEEKLEK 523
G+ P TY ++ L K
Sbjct: 385 SGVGPNSRTYDIILHHLIK 403
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 231 bits (588), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 126/408 (30%), Positives = 215/408 (52%), Gaps = 3/408 (0%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKK 176
AL G+ VS +VE LRRF N A+ FF WA+ Q Y H+ Y+TM++ L K ++
Sbjct: 12 ALDQNGIRVSPEIVEDVLRRFENAGMVAYRFFEWAEKQLHYTHSVRAYHTMIESLAKIRQ 71
Query: 177 FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALS 236
+ +MW+L+ M +++ T IMR+ R + ++AV F M+KY V + A +
Sbjct: 72 YQIMWDLINAMKR--KRMLNVETFCIIMRKYARAQKLEEAVYTFNVMEKYDVPPNLAAFN 129
Query: 237 VLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L L K +V A ++F KD S+ + IL+ GW KT + A++ +EM G
Sbjct: 130 GLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKTPNLPKAREIFREMVDVG 189
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
SPD+V+Y ++ C+ + D +KEM CKP+ Y++++H G +I +A+
Sbjct: 190 CSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIYSVLIHTYGIENRIEDAV 249
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ M+ + D + Y++LI K + K+ + +M +G+ PN T N ++++
Sbjct: 250 DTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQPNSRTLNIILNNL 309
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
AR E + A ++ ++M + +C+PD +TY ++KM C + +++ + +M K
Sbjct: 310 IARGETDEAFRVFRRMIK-VCEPDADTYTMMIKMFCERNELEMALKVWKYMKKKHFVPSM 368
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
T++ L+ GL E G + AC E+MI KGI P T+ L L K+
Sbjct: 369 HTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIKE 416
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 125/250 (50%), Gaps = 4/250 (1%)
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILI 273
A E FR M G D +++D L K V+ A + ++ C P +S I+++LI
Sbjct: 178 AREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKP-TSFIYSVLI 236
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
H + +++DA M + G DV +Y I +C+ F+ V L EM KG +
Sbjct: 237 HTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDYKGMQ 296
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ T I+++ L + +EA +V+ +M C PD Y+ +I + + ++ A ++
Sbjct: 297 PNSRTLNIILNNLIARGETDEAFRVFRRMIKV-CEPDADTYTMMIKMFCERNELEMALKV 355
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
++ MKK+ VP++ T++ +I+ C + +A +L+ M E +P T+ L + +
Sbjct: 356 WKYMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRHLLIK 415
Query: 454 KKRMKVLNFL 463
+ R VL FL
Sbjct: 416 EGREDVLEFL 425
>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 137/461 (29%), Positives = 232/461 (50%), Gaps = 14/461 (3%)
Query: 90 SENHETDVDKISKILSKQYQSPDKVVEA-LKGCGVSVSNSLVEQTLRRFSNDLTPAFGFF 148
S E+D + ISK+L Q+ +P E+ L+ G++++ +L+ TL R N A F
Sbjct: 30 SPRDESDAELISKLLL-QHHNPFHATESPLQLHGITLTPTLLFHTLLRLKNHSKIALSLF 88
Query: 149 TWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLV 208
+AKT + + ++D + K ++F + W+L+ EMD+ ++ + +T T++RRL+
Sbjct: 89 HYAKTLPNPPLSHSSFTLLIDTMAKVRQFDVAWQLIVEMDQRHHLTPTPSTFLTLIRRLI 148
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDT-RALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ 267
G AV AF + + K T + VL+DTL K V A +VF + K P + +
Sbjct: 149 CAGLTRQAVRAFHDIDAFSETKTTPQDFCVLLDTLCKYGHVRLAVEVFNKNKHTFPPTVK 208
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR----------EKDF 317
++ +LI+GWCK ++ AQ + EM +G P+VV+Y + CR E+
Sbjct: 209 MYTVLIYGWCKIGRIKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFERTI 268
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
R ++ +M+E G +P V +++I++H +A + L MK P+ Y+S+
Sbjct: 269 RNAEEVFDQMRESGIEPDVTSFSILLHVYSRAHKPQLVLDKLSLMKEKGICPNVVMYTSV 328
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED-L 436
I L+ G ++DA + +M + GV P TYN R + E+AL++ ++M+ED L
Sbjct: 329 IKCLASCGWLEDAERLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESALRMFKRMKEDGL 388
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C P TY L++M R +KV+ + M + D Y L+ GL E + AC
Sbjct: 389 CMPSSHTYVILIRMFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGLCERQRWREAC 448
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
+F EMI G +P T++ L L + + R+ K L
Sbjct: 449 HYFVEMIENGFLPLKGTFESLYRGLIQADMLRTWRRLKKKL 489
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/225 (19%), Positives = 95/225 (42%), Gaps = 37/225 (16%)
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY-KVFLEFKDCIPLSSQIFNILI 273
+A E F M++ G+E D + S+L+ + + + K+ L + I + ++ +I
Sbjct: 270 NAEEVFDQMRESGIEPDVTSFSILLHVYSRAHKPQLVLDKLSLMKEKGICPNVVMYTSVI 329
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD----------------- 316
++DA++ + EM + G SP +Y CF + + KD
Sbjct: 330 KCLASCGWLEDAERLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESALRMFKRMKEDGLC 389
Query: 317 -------------FRKVD------DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
F ++D + ++M+E G P + YT+++H L + ++ EA
Sbjct: 390 MPSSHTYVILIRMFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGLCERQRWREACH 449
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ +M + LP + SL L +A ++ + + + ++ +
Sbjct: 450 YFVEMIENGFLPLKGTFESLYRGLIQADMLRTWRRLKKKLDEESI 494
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 97/214 (45%), Gaps = 13/214 (6%)
Query: 337 ITYTIVMHALGKAK---QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+T T++ H L + K +I +L Y K + L +SF + LI ++K + A ++
Sbjct: 65 LTPTLLFHTLLRLKNHSKIALSLFHYAKTLPNPPLSHSSF-TLLIDTMAKVRQFDVAWQL 123
Query: 394 FEDM-KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE-DLCKPDCETYAPLLKMC 451
+M ++ + P T+ T+I A++ ++ K + + LL
Sbjct: 124 IVEMDQRHHLTPTPSTFLTLIRRLICAGLTRQAVRAFHDIDAFSETKTTPQDFCVLLDTL 183
Query: 452 CRKKRMKVLNFLLT---HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+ +++ + H F V M Y L+ G + G+++ A SF EMI KGI
Sbjct: 184 CKYGHVRLAVEVFNKNKHTFPPTVKM----YTVLIYGWCKIGRIKTAQSFLNEMIDKGIE 239
Query: 509 PYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKE 542
P TY +L + +K + +ER + + +A+E
Sbjct: 240 PNVVTYNVLLNGVCRKVSLHPEERFERTIRNAEE 273
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 132/427 (30%), Positives = 218/427 (51%), Gaps = 2/427 (0%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V++IS++LS D + L VS++LVEQ L+R N PA FF WAK
Sbjct: 38 VNEISRVLSDHRNPKDDLEHTLAAYSPRVSSNLVEQVLKRCKNLGFPAHRFFLWAKRIPD 97
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ H+ E Y+ +V++LG SK+F L+W+ + E E N ++ + R R +A
Sbjct: 98 FEHSLESYHILVEILGCSKQFALLWDFLIEAREYNYFEITSKVFWIVFRAYSRANLPSEA 157
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHG 275
AF M ++G++ L L+ +L V HA + F + K I S++ ++IL+ G
Sbjct: 158 SRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPSAKTYSILVRG 217
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
W + R A+K EM + D+++Y ++ C+ D +EM G KP
Sbjct: 218 WARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQEMGNLGLKPD 277
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
++ I +H+ A ++ A +V ++MK D +P+ ++ +I L K +V DA + +
Sbjct: 278 AYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLD 337
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M ++G P+ TYN++++ C E A KLL +M+ C PD TY +LK+ R
Sbjct: 338 EMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIRIG 397
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFFEEMISKGIVPYHSTY 514
R + + M + TY ++ GL+ + GKLE AC +FE MI +GI PY +T
Sbjct: 398 RFDRVTEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEACRYFEMMIDEGIPPYSTTV 457
Query: 515 KMLEEKL 521
+ML +L
Sbjct: 458 EMLRNRL 464
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 132/290 (45%), Gaps = 6/290 (2%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF AK G + + + Y+ +V + + ++ EM E NN V L + ++
Sbjct: 195 FFDKAKG-FGIVPSAKTYSILVRGWARIRDASGARKVFDEMLE-NNCVVDLLAYNALLDA 252
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPL 264
L + G D A + F+ M G++ D + ++ + + + V AY+V K D +P
Sbjct: 253 LCKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVP- 311
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ FN +I CK KVDDA + EM Q+G +PD +Y + ++C + + L
Sbjct: 312 NVYTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLL 371
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF-ILSK 383
M C P TY +V+ L + + + +++E M P + Y+ +I ++ K
Sbjct: 372 SRMDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEIWEGMSERKFYPTVATYTVMIHGLVRK 431
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
G++++A FE M +G+ P T + + + + L KME
Sbjct: 432 KGKLEEACRYFEMMIDEGIPPYSTTVEMLRNRLVGWGQMDVVDVLAGKME 481
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 229 bits (585), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 245/465 (52%), Gaps = 8/465 (1%)
Query: 54 FFDSQSPDEDFVIPSLAGWV---ESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQS 110
F S++ +++F + G V ++H N++++ S + +DV+K +IL K +
Sbjct: 41 FHVSRALEDNFRRSNGIGLVCLEKNHNHNDRTKNSK---YDEFASDVEKAYRILRKFHSR 97
Query: 111 PDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
K+ AL GV + L+E+ L R + + FF WA Q Y H+ E+Y +MV +
Sbjct: 98 VPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQPRYCHSIEVYKSMVKI 157
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
L K ++F +W L++EM + N + +++R A+E M +G+E
Sbjct: 158 LSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVKKAIEVLDEMPTFGLEP 217
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
D L+D L K SV+ A K+F + + P++ + F L++GWC+ K+ +A+ +
Sbjct: 218 DEYVFGCLLDALCKHGSVKDAAKLFEDMRLRFPVNLRYFTSLLYGWCREEKMMEAKYVLV 277
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
+M + GF PD+V YT + Y D LK+M+ +G +P+ YT+++ AL K
Sbjct: 278 QMKEAGFEPDIVDYTNLLSGYANAGKMADAYDLLKDMRRRGFEPNATCYTVLIQALCKVD 337
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++ EA+KV+ +M+ +C D Y++L+ K G++ + +DM K+G++P+ LTY
Sbjct: 338 RMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYM 397
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
++++ + + L+L++KM++ PD Y ++++ C+ +K L M N
Sbjct: 398 HIMAAHEKKEKLIECLELMEKMKQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEGN 457
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI--VPYHST 513
+S A T+ ++ GL G L AC F+EM+++G+ VP + T
Sbjct: 458 GLSPGADTFVIIINGLTSQGCLLEACDHFKEMVARGLFSVPQYGT 502
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 133/447 (29%), Positives = 232/447 (51%), Gaps = 3/447 (0%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
+DV+K+ +IL K + K+ AL+ GV V L E+ L R + A+ F++WA Q
Sbjct: 64 SDVEKVYRILRKYHSRVPKLELALRESGVVVRPGLTERVLNRCGDAGNLAYRFYSWASKQ 123
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
+G+ + Y M+ VL + ++F +W L++EM + N ++ +MRR
Sbjct: 124 SGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFASARMVH 183
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
AV+ M YG E D L+D L K SV+ A +F E + S + F L++
Sbjct: 184 KAVQVLDEMPNYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELRYRWKPSVKHFTSLLY 243
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
GWCK K+ +A+ + +M G PD+V Y + Y + D LKEM+ KGC+P
Sbjct: 244 GWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGDAYDLLKEMRRKGCEP 303
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ +YT+++ +L K +++ EA +V+ +M+ + C D YS+LI K G++K E+
Sbjct: 304 NATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLISGFCKWGKIKRGYELL 363
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M +QG PN + Y ++ + + E E +L+ +M++ C PD Y ++++ C+
Sbjct: 364 DEMIQQGHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKL 423
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI--VPYHS 512
+K L M + +S T+ ++ G +E G L AC +F+EM+ +G+ P +
Sbjct: 424 GEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFAAPQYG 483
Query: 513 TYK-MLEEKLEKKRLGNAKERINKLLA 538
T K ++ L ++L AK+ N + A
Sbjct: 484 TLKELMNSLLRAEKLEMAKDAWNCITA 510
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 114/313 (36%), Gaps = 79/313 (25%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM-RRLVRGGRYDDAVEAFR 221
+YN ++ ++ K ++L+KEM G AT T++ + L + R ++A F
Sbjct: 272 VYNNLLGGYAQADKMGDAYDLLKEMR--RKGCEPNATSYTVLIQSLCKHERLEEATRVFV 329
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--------------------- 260
M++ G + D S L+ K ++ Y++ E
Sbjct: 330 EMQRNGCQADLVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMVAHEKKE 389
Query: 261 ----------------CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
C P S I+N +I CK +V + + EM G SP + ++
Sbjct: 390 ELEECKELVNEMQKIGCAPDLS-IYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTF 448
Query: 305 T----------CFIE--HYCREKDFRKV-----DDTLKEMQE------------------ 329
C +E Y +E R + TLKE+
Sbjct: 449 VIMINGFLEQGCLVEACEYFKEMVGRGLFAAPQYGTLKELMNSLLRAEKLEMAKDAWNCI 508
Query: 330 ---KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
KGC+ +V +TI +HAL + EA M D +P ++ L+ L K
Sbjct: 509 TASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIAMMDKDLMPQPDTFAKLMRGLKKLYN 568
Query: 387 VKDANEIFEDMKK 399
+ A EI E ++K
Sbjct: 569 REFAAEITEKVRK 581
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 224/434 (51%), Gaps = 2/434 (0%)
Query: 90 SENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT 149
++ DV+K+ +IL K + K+ AL+ GV + + L E+ L R + + FF
Sbjct: 70 ADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERVLSRCGDAGNLGYRFFV 129
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
WA Q GY H+ E+Y M+ LGK ++F +W L++EM + N ++ +MRR
Sbjct: 130 WASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFAS 189
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF 269
AVE M KYG E D L+D L K SV+ A +F + + + + F
Sbjct: 190 VRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHF 249
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
L++GWC+ K+ +A+ + ++ + GF PD+V Y + Y + R D L EM++
Sbjct: 250 TSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKK 309
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
C P+ ++TI++ + K ++++EA++++ +M+ C D Y++LI K G
Sbjct: 310 VNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDK 369
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A EI +DM ++G P+ L+Y ++ + + E E ++L+++M + C PD Y +++
Sbjct: 370 AYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIR 429
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV- 508
+ C+ +K L M ++ TY +V G + G L AC +F+EM+ +G++
Sbjct: 430 LVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLS 489
Query: 509 -PYHSTYKMLEEKL 521
P + T K L L
Sbjct: 490 APQYGTLKELTNAL 503
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 125/263 (47%), Gaps = 6/263 (2%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG---FSPDVVSYTCFIEHYCREKDFRKVD 321
S +++ +I K R+ ++EM ++ +P+V + + + + +K
Sbjct: 140 SYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEV--FIVLMRRFASVRMVKKAV 197
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ L EM + GC+P + ++ AL K + EA ++E M+ P+ ++SL++
Sbjct: 198 EVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGW 256
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+ G++ +A + +K+ G P+++ YN ++ + +A LL +M++ C P+
Sbjct: 257 CREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNA 316
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
++ L++ C+ ++M + T M + D TY +L+ G + G + A ++
Sbjct: 317 ASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDD 376
Query: 502 MISKGIVPYHSTYKMLEEKLEKK 524
MI KG P +Y + EKK
Sbjct: 377 MIQKGHDPSQLSYLCIMMAHEKK 399
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 119/319 (37%), Gaps = 74/319 (23%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ +YN ++ ++ K ++L+ EM ++N G + A+ + +++ + +
Sbjct: 274 EAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCG-PNAASFTILIQSFCKTEKM 332
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF------------------ 255
D+A+ F M+ G E D + L+ K + + AY++
Sbjct: 333 DEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCI 392
Query: 256 -------LEFKDCIPLSSQ-----------IFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
E ++C+ L + I+N +I CK + +A + EM G
Sbjct: 393 MMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGL 452
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE---------------------------- 329
+P + +Y + + + + D KEM E
Sbjct: 453 NPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMA 512
Query: 330 ---------KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
KGC+ +V +TI +HAL + EA M D +P ++ L+
Sbjct: 513 KNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRG 572
Query: 381 LSKAGRVKDANEIFEDMKK 399
L K + A EI E ++K
Sbjct: 573 LKKLFHRQLAVEITEKVRK 591
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 228 bits (582), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 127/434 (29%), Positives = 224/434 (51%), Gaps = 2/434 (0%)
Query: 90 SENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT 149
++ DV+K+ +IL K + K+ AL+ GV + + L E+ L R + + FF
Sbjct: 93 ADEFSVDVEKVYRILRKFHTRVPKLELALQESGVIMRSGLPERVLSRCGDAGNLGYRFFV 152
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
WA Q GY H+ E+Y M+ LGK ++F +W L++EM + N ++ +MRR
Sbjct: 153 WASKQPGYRHSYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEVFIVLMRRFAS 212
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF 269
AVE M KYG E D L+D L K SV+ A +F + + + + F
Sbjct: 213 VRMVKKAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHF 272
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
L++GWC+ K+ +A+ + ++ + GF PD+V Y + Y + R D L EM++
Sbjct: 273 TSLLYGWCREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKK 332
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
C P+ ++TI++ + K ++++EA++++ +M+ C D Y++LI K G
Sbjct: 333 VNCGPNAASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDK 392
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A EI +DM ++G P+ L+Y ++ + + E E ++L+++M + C PD Y +++
Sbjct: 393 AYEILDDMIQKGHDPSQLSYLCIMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIR 452
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV- 508
+ C+ +K L M ++ TY +V G + G L AC +F+EM+ +G++
Sbjct: 453 LVCKLGDLKEAVRLWGEMQAGGLNPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLS 512
Query: 509 -PYHSTYKMLEEKL 521
P + T K L L
Sbjct: 513 APQYGTLKELTNAL 526
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/263 (22%), Positives = 125/263 (47%), Gaps = 6/263 (2%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG---FSPDVVSYTCFIEHYCREKDFRKVD 321
S +++ +I K R+ ++EM ++ +P+V + + + + +K
Sbjct: 163 SYEVYKAMIKTLGKMRQFGAVWALIEEMRKENPYMLTPEV--FIVLMRRFASVRMVKKAV 220
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ L EM + GC+P + ++ AL K + EA ++E M+ P+ ++SL++
Sbjct: 221 EVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVR-FNPNLRHFTSLLYGW 279
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+ G++ +A + +K+ G P+++ YN ++ + +A LL +M++ C P+
Sbjct: 280 CREGKIMEAKHVLVQIKEAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNA 339
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
++ L++ C+ ++M + T M + D TY +L+ G + G + A ++
Sbjct: 340 ASFTILIQSFCKTEKMDEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDD 399
Query: 502 MISKGIVPYHSTYKMLEEKLEKK 524
MI KG P +Y + EKK
Sbjct: 400 MIQKGHDPSQLSYLCIMMAHEKK 422
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/319 (19%), Positives = 119/319 (37%), Gaps = 74/319 (23%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ +YN ++ ++ K ++L+ EM ++N G + A+ + +++ + +
Sbjct: 297 EAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCG-PNAASFTILIQSFCKTEKM 355
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF------------------ 255
D+A+ F M+ G E D + L+ K + + AY++
Sbjct: 356 DEAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQKGHDPSQLSYLCI 415
Query: 256 -------LEFKDCIPLSSQ-----------IFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
E ++C+ L + I+N +I CK + +A + EM G
Sbjct: 416 MMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGGL 475
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE---------------------------- 329
+P + +Y + + + + D KEM E
Sbjct: 476 NPGLDTYILMVHGFLSQGCLVEACDYFKEMVERGLLSAPQYGTLKELTNALLRAEKLEMA 535
Query: 330 ---------KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
KGC+ +V +TI +HAL + EA M D +P ++ L+
Sbjct: 536 KNMWSCMTTKGCELNVSAWTIWIHALFSNGHVKEACSYCLDMMDADLMPQPDTFAKLMRG 595
Query: 381 LSKAGRVKDANEIFEDMKK 399
L K + A EI E ++K
Sbjct: 596 LKKLFHRQLAVEITEKVRK 614
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 132/447 (29%), Positives = 233/447 (52%), Gaps = 3/447 (0%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
+DV+K+ +IL K + K+ AL+ GV V L E+ L R + A+ F++WA Q
Sbjct: 90 SDVEKVYRILRKYHSRVPKLELALRESGVVVRPGLTERVLSRCGDAGNLAYRFYSWASKQ 149
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
+G+ + Y M+ VL + ++F +W L++EM + N ++ +MRR
Sbjct: 150 SGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRFASARMVH 209
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
AVE M KYG E D L+D L K SV+ A +F + + S + F L++
Sbjct: 210 KAVEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRYRWKPSVKHFTSLLY 269
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
GWCK K+ +A+ + +M G PD+V Y + Y + D LKEM+ K C+P
Sbjct: 270 GWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEP 329
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ +YT+++ +L K +++ EA +++ +M+++ C D YS+LI K G++K E+
Sbjct: 330 NATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLISGFCKWGKIKRGYELL 389
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M +QG PN + Y ++ + + E E +L+ +M++ C PD Y ++++ C+
Sbjct: 390 DEMIQQGHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGCAPDLSIYNTVIRLACKL 449
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI--VPYHS 512
+K L M + +S T+ ++ G +E G L AC +F+EM+ +G+ P +
Sbjct: 450 GEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYG 509
Query: 513 TYK-MLEEKLEKKRLGNAKERINKLLA 538
T K ++ L ++L AK+ N + A
Sbjct: 510 TLKELMNSLLRAEKLEMAKDAWNCITA 536
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/291 (18%), Positives = 108/291 (37%), Gaps = 74/291 (25%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ + ++ + G+ DA + + M++ E + + +VL+ +L K +E A ++F+
Sbjct: 296 IVVYNNLLGGYAQAGKMGDAYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFV 355
Query: 257 EFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF------------------ 297
E + + ++ LI G+CK K+ + + EM QQG
Sbjct: 356 EMQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKE 415
Query: 298 -----------------SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+PD+ Y I C+ + ++ EM+ G P + T+
Sbjct: 416 ELEECKELVNEMQKIGCAPDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFV 475
Query: 341 IVMHAL---------------------------GKAKQINEALKVYEKMK---------- 363
I+++ G K++ +L EK++
Sbjct: 476 IMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNCIT 535
Query: 364 -SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
S C + S ++ I L G VK+A DM + ++PN T+ ++
Sbjct: 536 ASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKLM 586
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 64/312 (20%), Positives = 113/312 (36%), Gaps = 77/312 (24%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YN ++ ++ K ++L+KEM + + + +++ L + R ++A F
Sbjct: 298 VYNNLLGGYAQAGKMGDAYDLLKEMRR-KRCEPNATSYTVLIQSLCKHERLEEATRLFVE 356
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---------------------- 260
M+ G + D S L+ K ++ Y++ E
Sbjct: 357 MQTNGCQADVVTYSTLISGFCKWGKIKRGYELLDEMIQQGHFPNQVIYQHIMLAHEKKEE 416
Query: 261 ---------------CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
C P S I+N +I CK +V + + EM G SP + ++
Sbjct: 417 LEECKELVNEMQKIGCAPDLS-IYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFV 475
Query: 306 ----------CFIE--HYCREKDFRKV-----DDTLKEMQE------------------- 329
C +E Y +E R + TLKE+
Sbjct: 476 IMINGFLEQGCLVEACEYFKEMVGRGLFTAPQYGTLKELMNSLLRAEKLEMAKDAWNCIT 535
Query: 330 --KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
KGC+ +V +TI +HAL + EA M D +P+ ++ L+ L K
Sbjct: 536 ASKGCQLNVSAWTIWIHALFSKGHVKEACSFCIDMMDKDLMPNPDTFAKLMHGLKKLYNR 595
Query: 388 KDANEIFEDMKK 399
+ A EI E ++K
Sbjct: 596 QFAAEITEKVRK 607
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 145/451 (32%), Positives = 228/451 (50%), Gaps = 14/451 (3%)
Query: 94 ETDVDKISKILSKQYQS-PDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAK 152
E D +I +LS S DK++E + VS SLV + L+R SN A FFTWA+
Sbjct: 92 EQDAARICTLLSTHSGSHADKLLE---DASIKVSPSLVVEVLKRLSNAGVIALSFFTWAE 148
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
Q G+ + E YN +++ LGK K+F L+ LV EM + ++ T + I RR R +
Sbjct: 149 KQKGFKYNTESYNALIEALGKIKQFKLIRSLVNEMK--SRKLLNKDTFALISRRHARARK 206
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFN 270
++A+EAF M+++G + +T + L+DTL K VE A KVF + K +P + +
Sbjct: 207 VEEAIEAFERMEEFGFKLETSDFNRLLDTLCKSRHVEKANKVFDKMKKRRFVP-DIKSYT 265
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
IL+ GW K + + EM GF PDVV+Y I YC+ K + + EM+ K
Sbjct: 266 ILLEGWGKEHNLLRLDEVYLEMKYDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAK 325
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
CKP+ Y +++ LG K+++EAL+ +E+ KS P+ Y+SL+ + R+ DA
Sbjct: 326 NCKPTPHVYCTLINGLGSEKRLSEALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDA 385
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM-EEDLCKPDCETYAPLLK 449
++ ++M+K PN TY+ ++ A QKM E C+P TY +++
Sbjct: 386 FQVIDEMRKHSAGPNSRTYDIILHHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVR 445
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
M C + R+ + + M V Y+ L+ L KL AC +F+EM+ GI P
Sbjct: 446 MFCNEDRVDLAKQVWDQMKAKGVLPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRP 505
Query: 510 YHSTYKMLEEKL----EKKRLGNAKERINKL 536
+ L++ L + N +INKL
Sbjct: 506 PAKMFSNLKQALLDEGKNDEALNLARKINKL 536
>gi|356560394|ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 612
Score = 225 bits (574), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/441 (31%), Positives = 226/441 (51%), Gaps = 8/441 (1%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
DV I I+ + P ++ + L+ C + +S LV + L R ND AF FF WA Q
Sbjct: 127 DVKTILAIMHEVGSGPSQIKQKLEHCSIVLSPELVVEVLSRTRNDWEAAFTFFLWAGKQP 186
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY H+ Y++M+ +LGK +KF W L++EM NG +SL T T++ + + D
Sbjct: 187 GYAHSVREYHSMISILGKMRKFDTAWNLIEEMRGGRNG-LSLVTPQTLLIMIRKYCAVHD 245
Query: 216 ---AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNIL 272
A+ F K++ L+ L + +V+ A + KD PL ++ FNI+
Sbjct: 246 VARAINTFYAYKRFNFRVGLEEFHSLLSALCRYKNVQDAEYLLFCNKDVFPLDTKSFNII 305
Query: 273 IHGWCK-TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++GWC A++ EM ++ DVVSY I Y + KV EM+++
Sbjct: 306 LNGWCNLIVSTSHAERIWHEMIKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRK 365
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P Y V++AL K + + EA+ + M+ +D PD Y+SLI L KA +V +A
Sbjct: 366 ITPDRKVYNAVIYALAKGRLVKEAVNLIGTMEGNDVTPDVVTYNSLIKPLCKAHKVDEAK 425
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++F++M K+ + P + T++ R++EE +LL KM+E C P ETY L++
Sbjct: 426 QLFDEMLKRHLSPTIQTFHAFFR--ILRTKEE-VFELLDKMKELRCYPTIETYIMLIRKF 482
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
CR ++ + + M ++++S D +Y L+ GL +GKLE A ++ EM KG +P
Sbjct: 483 CRWCQLDDVFKIWDAMREDEISHDRSSYIVLIHGLFLNGKLEEAQRYYAEMQEKGFLPEP 542
Query: 512 STYKMLEEKLEKKRLGNAKER 532
T +ML+ + K+ +E+
Sbjct: 543 KTEEMLQAWVSGKQATEGQEK 563
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 111/223 (49%), Gaps = 8/223 (3%)
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWC 277
F MKK + D + + ++ L KG V+ A + +E D P +N LI C
Sbjct: 358 FDEMKKRKITPDRKVYNAVIYALAKGRLVKEAVNLIGTMEGNDVTP-DVVTYNSLIKPLC 416
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K KVD+A++ EM ++ SP + ++ F R K+ +V + L +M+E C P++
Sbjct: 417 KAHKVDEAKQLFDEMLKRHLSPTIQTFHAFFR-ILRTKE--EVFELLDKMKELRCYPTIE 473
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY +++ + Q+++ K+++ M+ D+ D S Y LI L G++++A + +M
Sbjct: 474 TYIMLIRKFCRWCQLDDVFKIWDAMREDEISHDRSSYIVLIHGLFLNGKLEEAQRYYAEM 533
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQ--KMEEDLCK 438
+++G +P T + + + E K L+ ++E D K
Sbjct: 534 QEKGFLPEPKTEEMLQAWVSGKQATEGQEKDLEPSQLENDTLK 576
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 225 bits (574), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 135/456 (29%), Positives = 234/456 (51%), Gaps = 3/456 (0%)
Query: 79 NEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFS 138
N R +S + DV+K+ +IL + K+ AL+ GV++ L E+ L R
Sbjct: 58 NTSDRDNSSSKVDEFAKDVEKVYRILRNFHSRVPKLELALQESGVTMRAGLTERVLNRCG 117
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
+ + FF WA Q GY H+ E Y MV + K ++F +W L++EM + N+ ++
Sbjct: 118 DAGNLGYRFFVWASKQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSE 177
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
++RR + A+E M KYG E D L+D L K SV+ A +F +
Sbjct: 178 LFIVLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDM 237
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
+ S + F L++GWC+ K+ +A+ + +M + GF PD+V + + Y
Sbjct: 238 RVRFSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMT 297
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
D LKEM KGC+P+ +YTI++ A ++++EA++V+ +M+ C D Y++LI
Sbjct: 298 DAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALI 357
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
K G++ +I + MK++G +PN LTY ++ + + E E L+L++ M C
Sbjct: 358 SGFCKWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCV 417
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PD Y ++++ C+ +K + M +D S + T+ ++ G + G L AC +
Sbjct: 418 PDLSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEY 477
Query: 499 FEEMISKGIV--PYHSTYK-MLEEKLEKKRLGNAKE 531
F+EMI +G++ P + K +L L ++LG AK+
Sbjct: 478 FKEMIGRGLLTTPQYGILKELLNALLRGEKLGMAKD 513
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 105/236 (44%), Gaps = 19/236 (8%)
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
+ I + + K + L EM + GC+P + ++ AL K + +A ++E M+
Sbjct: 179 FIVLIRRFASARLVEKAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDMR 238
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
P ++SL++ + G++ +A + M++ G P+++ +N ++S+ +
Sbjct: 239 VRFS-PSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMT 297
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
+A LL++M C+P+ +Y +++ C +++M + M + D TY +L+
Sbjct: 298 DAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALI 357
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
G + GK+ + M KG +P TY + LLAH
Sbjct: 358 SGFCKWGKINRGYQILDAMKQKGHMPNQLTY------------------LRILLAH 395
Score = 52.0 bits (123), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/321 (19%), Positives = 124/321 (38%), Gaps = 43/321 (13%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM-RRLVRGGR 212
+ G+ ++N ++ + K ++L+KEM + G A TIM + +
Sbjct: 273 EAGFEPDIVVFNNLLSAYSMAGKMTDAFDLLKEM--VRKGCEPNANSYTIMIQAFCSQEK 330
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD------------ 260
D+A+ F M++ G E D + L+ K + Y++ K
Sbjct: 331 MDEAMRVFVEMERTGCEADVVTYTALISGFCKWGKINRGYQILDAMKQKGHMPNQLTYLR 390
Query: 261 -------------------------CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
C+P S I+N++I CK +V + EM
Sbjct: 391 ILLAHEKKEELEECLELIESMRMVGCVPDLS-IYNVVIRLACKLGEVKQGVQIWNEMEAS 449
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG--CKPSVITYTIVMHALGKAKQIN 353
FSP++ ++ I + + + + KEM +G P +++AL + +++
Sbjct: 450 DFSPELDTFVIMIHGFLGQGCLVEACEYFKEMIGRGLLTTPQYGILKELLNALLRGEKLG 509
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
A V+ + + C + ++ I L G VK+A DM + ++P T+ ++
Sbjct: 510 MAKDVWSCIVTKGCELNADAWTIWIHSLFSNGHVKEACSYCLDMMEADIMPKPETFAKLM 569
Query: 414 SSACARSEEENALKLLQKMEE 434
E A ++ +K+++
Sbjct: 570 RGLRKLYNREFAAEITEKIKD 590
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 224 bits (571), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 135/441 (30%), Positives = 229/441 (51%), Gaps = 8/441 (1%)
Query: 82 SRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDL 141
S + ++V + + D DKI KILSK S KV L V +S +L+E+ L++ SN
Sbjct: 53 SSVETQVSANDVSQDADKICKILSKFTDS--KVETLLNEASVKLSPALIEEVLKKLSNAG 110
Query: 142 TPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS 201
A F WA+ Q G+ HT YN +++ LGK K+F L+W LV +M + +S T +
Sbjct: 111 VLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWNLVDDMKQ--KKLLSKDTFA 168
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KD 260
I RR R + +A+ AF M+ YG + ++ + ++D L K +V A KVF + K
Sbjct: 169 LISRRYARARKVKEAITAFHKMEDYGFKMESSDFNRMLDILSKSRNVGDAQKVFDKMKKK 228
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
+ + IL+ GW + + + EM +GF PDVV+Y I YC+ K + +
Sbjct: 229 RFEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKYDEA 288
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
EM+++ CKPS + +++ LG K++N+AL+ +E+ KS + Y++L+
Sbjct: 289 VRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 348
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ R++DA + ++M+ +G+ PN TY+ ++ + A ++ QKM C+P
Sbjct: 349 YCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQRTKEAYEVYQKMS---CEPT 405
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY +++M C K+R+ + + M V ++SL+ L KL+ AC +F
Sbjct: 406 VSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFN 465
Query: 501 EMISKGIVPYHSTYKMLEEKL 521
EM+ GI P + L++ L
Sbjct: 466 EMLDVGIRPPGHLFSRLKQTL 486
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 224 bits (570), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 130/440 (29%), Positives = 231/440 (52%), Gaps = 3/440 (0%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
+DV+K +IL K + K+ AL GV + L+E+ L R + + FF WA Q
Sbjct: 81 SDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQ 140
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
Y H+ E+Y +MV +L K ++F +W L++EM + N + +++R
Sbjct: 141 PRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVK 200
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
A+E M K+G E D L+D L K SV+ A K+F + + P++ + F L++
Sbjct: 201 KAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMRMRFPVNLRYFTSLLY 260
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
GWC+ K+ +A+ + +M + GF PD+V YT + Y D L++M+ +G +P
Sbjct: 261 GWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEP 320
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ YT+++ AL K ++ EA+KV+ +M+ +C D Y++L+ K G++ +
Sbjct: 321 NANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 380
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+DM K+G++P+ LTY ++ + + E L+L++KM + PD Y ++++ C+
Sbjct: 381 DDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKL 440
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI--VPYHS 512
+K L M +N +S T+ ++ GL G L A F+EM+++G+ V +
Sbjct: 441 GEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYG 500
Query: 513 TYK-MLEEKLEKKRLGNAKE 531
T K +L L+ K+L AK+
Sbjct: 501 TLKLLLNTVLKDKKLEMAKD 520
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 60/310 (19%), Positives = 114/310 (36%), Gaps = 77/310 (24%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM-RRLVRGGRYDDAVEAFRG 222
Y ++ + K ++L+++M G+ A T++ + L + R ++A++ F
Sbjct: 290 YTNLLSGYANAGKMADAYDLLRDMR--RRGFEPNANCYTVLIQALCKVDRMEEAMKVFVE 347
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE------------------------- 257
M++Y E D + L+ K ++ Y V +
Sbjct: 348 MERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKES 407
Query: 258 FKDCIPLSSQ-----------IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
F++C+ L + I+N++I CK +V +A + EM + G SP V ++
Sbjct: 408 FEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVI 467
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKG----------------------------------- 331
I + + D KEM +G
Sbjct: 468 MINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLKLLLNTVLKDKKLEMAKDVWSCITS 527
Query: 332 ---CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
C+ +V+++TI +HAL EA +M D +P ++ L+ L K +
Sbjct: 528 KGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNRE 587
Query: 389 DANEIFEDMK 398
A EI E ++
Sbjct: 588 FAGEITEKVR 597
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 240/452 (53%), Gaps = 8/452 (1%)
Query: 73 VESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL-KGCGVSVSNSLVE 131
+E + + K+ S V S+ D +K K++SK +P+ +E+L G + +S +L+
Sbjct: 70 IEHSKQDLKASQKSIVESDEIAQDAEKFCKLISK---NPNSCIESLLDGAPMELSPALIV 126
Query: 132 QTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN 191
+ L++ SN A FF WA+ Q G+ HT E YN +++ LGK K+F ++W LV +M
Sbjct: 127 EVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKR-- 184
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
G +S T + I RR R + +AVE+F M+K+G + + L+DTL K +V+ A
Sbjct: 185 KGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKA 244
Query: 252 YKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+VF + K + + IL+ GW + + + + +EM +GF PDVV++ I
Sbjct: 245 QEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINA 304
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
+C+ + + + EM+ K KPS + +++ LG K++ EAL+ +E++K P+
Sbjct: 305 HCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPE 364
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y++++ + ++ A + ++M+K GV PN TY+ ++ + + A + Q
Sbjct: 365 APTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQ 424
Query: 431 KM-EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M E C+P TY +++M C ++R+ + + M V +++L+ L
Sbjct: 425 RMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHE 484
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
KLE AC++F+EM+ GI P + + L++ L
Sbjct: 485 HKLEDACTYFQEMLDVGIRPPATMFSNLKQAL 516
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 135/278 (48%), Gaps = 13/278 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +++ G+ + + E+ +EM + G+ + T ++ + +YD+A+ F
Sbjct: 263 YTILLEGWGQDQNLLKLNEVYREMRD--EGFEPDVVTFGILINAHCKARKYDEAIRLFHE 320
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS-----SQIFNILIHGWC 277
M+ ++ TL+ G E K LEF + + LS + +N ++ +C
Sbjct: 321 MEAKNIKPSPHVFC----TLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYC 376
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM-QEKGCKPSV 336
+ K+ A + + EM + G P+ +Y + H + + ++ + M +E GC+P++
Sbjct: 377 WSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTL 436
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TY I++ ++++ A++++++MK+ LP +S+LI L +++DA F++
Sbjct: 437 STYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQE 496
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
M G+ P ++ + + ++ AL + +K+++
Sbjct: 497 MLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIKK 534
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 126/261 (48%), Gaps = 1/261 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+++ +N+LI K ++ + + +M ++G ++ Y R + ++ ++
Sbjct: 155 TTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRE-TFALITRRYARARKVKEAVESF 213
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
++M++ G + V + ++ L K++ + +A +V++KMK PD Y+ L+ +
Sbjct: 214 EKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQD 273
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
+ NE++ +M+ +G P+V+T+ +I++ C + + A++L +ME KP +
Sbjct: 274 QNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVF 333
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ +KR+K + + + +A TY ++V S K+ A +EM
Sbjct: 334 CTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRK 393
Query: 505 KGIVPYHSTYKMLEEKLEKKR 525
G+ P TY ++ L K R
Sbjct: 394 SGVGPNSRTYDIILHHLIKGR 414
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 108/245 (44%), Gaps = 3/245 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+ +++ K++K+ L EM E N S T++ L R +A+E F +
Sbjct: 298 FGILINAHCKARKYDEAIRLFHEM-EAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQL 356
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
K G + + ++ + +AY++ E K + +S+ ++I++H K RK
Sbjct: 357 KLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKS 416
Query: 283 DDAQKAMKEMFQQ-GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+A + M ++ G P + +Y I +C E+ EM+ KG P + ++
Sbjct: 417 KEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFST 476
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++L ++ +A +++M P + +S+L L GR A + E +KK
Sbjct: 477 LINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIKKLR 536
Query: 402 VVPNV 406
P V
Sbjct: 537 KAPLV 541
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 131/452 (28%), Positives = 240/452 (53%), Gaps = 8/452 (1%)
Query: 73 VESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL-KGCGVSVSNSLVE 131
+E + + K+ S V S+ D +K K++SK +P+ +E+L G + +S +L+
Sbjct: 70 IEHSKQDLKASQKSIVESDEIAQDAEKFCKLISK---NPNSCIESLLDGAPMELSPALIV 126
Query: 132 QTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN 191
+ L++ SN A FF WA+ Q G+ HT E YN +++ LGK K+F ++W LV +M
Sbjct: 127 EVLKKLSNAGFLALSFFRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKR-- 184
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
G +S T + I RR R + +AVE+F M+K+G + + L+DTL K +V+ A
Sbjct: 185 KGILSRETFALITRRYARARKVKEAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKA 244
Query: 252 YKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+VF + K + + IL+ GW + + + + +EM +GF PDVV++ I
Sbjct: 245 QEVFDKMKHGRFKPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINA 304
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
+C+ + + + EM+ K KPS + +++ LG K++ EAL+ +E++K P+
Sbjct: 305 HCKARKYDEAIRLFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPE 364
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y++++ + ++ A + ++M+K GV PN TY+ ++ + + A + Q
Sbjct: 365 APTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQ 424
Query: 431 KM-EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M E C+P TY +++M C ++R+ + + M V +++L+ L
Sbjct: 425 RMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHE 484
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
KLE AC++F+EM+ GI P + + L++ L
Sbjct: 485 HKLEDACTYFQEMLDVGIRPPATMFSNLKQAL 516
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/261 (21%), Positives = 126/261 (48%), Gaps = 1/261 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+++ +N+LI K ++ + + +M ++G ++ Y R + ++ ++
Sbjct: 155 TTESYNLLIEALGKIKQFNVIWNLVSDMKRKGILSRE-TFALITRRYARARKVKEAVESF 213
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
++M++ G + V + ++ L K++ + +A +V++KMK PD Y+ L+ +
Sbjct: 214 EKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILLEGWGQD 273
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
+ NE++ +M+ +G P+V+T+ +I++ C + + A++L +ME KP +
Sbjct: 274 QNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKPSPHVF 333
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ +KR+K + + + +A TY ++V S K+ A +EM
Sbjct: 334 CTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRK 393
Query: 505 KGIVPYHSTYKMLEEKLEKKR 525
G+ P TY ++ L K R
Sbjct: 394 SGVGPNSRTYDIILHHLIKGR 414
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 133/276 (48%), Gaps = 13/276 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +++ G+ + + E+ +EM + G+ + T ++ + +YD+A+ F
Sbjct: 263 YTILLEGWGQDQNLLKLNEVYREMRD--EGFEPDVVTFGILINAHCKARKYDEAIRLFHE 320
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS-----SQIFNILIHGWC 277
M+ ++ TL+ G E K LEF + + LS + +N ++ +C
Sbjct: 321 MEAKNIKPSPHVFC----TLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYC 376
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM-QEKGCKPSV 336
+ K+ A + + EM + G P+ +Y + H + + ++ + M +E GC+P++
Sbjct: 377 WSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTL 436
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TY I++ ++++ A++++++MK+ LP +S+LI L +++DA F++
Sbjct: 437 STYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQE 496
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
M G+ P ++ + + ++ AL + +K+
Sbjct: 497 MLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKI 532
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 107/245 (43%), Gaps = 3/245 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+ +++ K++K+ L EM E N S T++ L R +A+E F +
Sbjct: 298 FGILINAHCKARKYDEAIRLFHEM-EAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQL 356
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
K G + + ++ + +AY++ E K + +S+ ++I++H K RK
Sbjct: 357 KLSGFAPEAPTYNAVVGAYCWSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKS 416
Query: 283 DDAQKAMKEMFQQ-GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+A + M ++ G P + +Y I +C E+ EM+ KG P + ++
Sbjct: 417 KEAYSVFQRMSREPGCEPTLSTYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFST 476
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++L ++ +A +++M P + +S+L L GR A + E + K
Sbjct: 477 LINSLCHEHKLEDACTYFQEMLDVGIRPPATMFSNLKQALLDDGRKDTALLMAEKIXKLR 536
Query: 402 VVPNV 406
P V
Sbjct: 537 KAPLV 541
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 223/426 (52%), Gaps = 1/426 (0%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V++IS++LS + +L +S +LVEQ L+R N A FF WAK+ G
Sbjct: 47 VNEISRLLSDHRYPHHDLELSLNPFSAQLSTNLVEQVLKRCKNLGFSAHRFFLWAKSIPG 106
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ H+ ++ +V++LG K+F ++W+ + EM E ++ ++ I R + D A
Sbjct: 107 FQHSVMSFHILVEILGSCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQANLPDGA 166
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
+ +F M ++GV+ L L+ L K V+ A ++F + K+ L+++ ++ILI GW
Sbjct: 167 IRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNRFSLTAKTYSILISGW 226
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ + A + M +QG D+++Y ++ C+ + + +M K +P
Sbjct: 227 GEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEPDA 286
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TY+I +H+ A + A +V +KM+ + LP+ Y+ +I L K V++A ++ ++
Sbjct: 287 FTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLLDE 346
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M +GV P+ +YN + + C E AL+L+ +ME+D+C PD TY +LK+ R R
Sbjct: 347 MISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNMVLKLLIRIGR 406
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFFEEMISKGIVPYHSTYK 515
+ + +M TY+ ++ G + GKLE AC +FE MI +GI PY +T +
Sbjct: 407 FDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVE 466
Query: 516 MLEEKL 521
ML +L
Sbjct: 467 MLRNRL 472
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 222 bits (565), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 137/463 (29%), Positives = 232/463 (50%), Gaps = 19/463 (4%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
D D +S+IL + + +L+ +S S+ L++QTL R ++ A FF +A +
Sbjct: 37 DADLVSQILLHHHNPFHSMESSLQLHSISFSSHLLDQTLLRLTHHSKIALSFFDYANSLP 96
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
+ YN ++D+L K ++F W L+ +MD T ++RRL+ GR
Sbjct: 97 SNPISTTSYNILLDILAKVRQFDAAWHLILQMDHKGTD-----TFLLLIRRLISSGRTRQ 151
Query: 216 AVEAFRGMKKY-GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
A+ AF ++ G + L+D L K V+ A +VF + K+ + +I+ ILI+
Sbjct: 152 AIRAFDDIEGLTGNKVGIDDFCYLLDVLCKYGYVKVAVEVFNKRKEEFGVDVKIYTILIY 211
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR----------EKDFRKVDDTL 324
GWCK + + A++ +K+M ++G P+VV+Y + CR EK R +
Sbjct: 212 GWCKIGRFEMAERFLKDMVERGIEPNVVTYNVLLNGVCRRASLHPEGRFEKTIRHAEKVF 271
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
EM+++G +P V +++IV+H +A + +L ++MK P + Y+S+I L
Sbjct: 272 DEMRKRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELGISPTVATYTSVIKCLCSC 331
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED-LCKPDCET 443
GR++D + E+M + G+ P+ TYN R + AL+L +KM ED LC P T
Sbjct: 332 GRLEDGENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHT 391
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y LL + + + L L M ++ V D +Y +++ GL E + AC FF EMI
Sbjct: 392 YNILLALFLNLDKKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMI 451
Query: 504 SKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
+G +P T++ML L + + R+ K L +E KT+
Sbjct: 452 ERGFLPQKVTFEMLYRGLIQSDMLRTWRRLKKKL--EEESKTY 492
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 221 bits (564), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 132/426 (30%), Positives = 220/426 (51%), Gaps = 1/426 (0%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V++IS+ILS + +L +S +LVEQ L+R N A FF WAK G
Sbjct: 44 VNEISRILSDHRNPHHDLELSLTTYSSHISTTLVEQVLKRCKNLGFSAQRFFLWAKRIPG 103
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ H+ E Y+ +VD+LG SK+F L+W+ + E+ E + +S + R R DA
Sbjct: 104 FDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRANLPSDA 163
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
+ AF M ++G++ L L+ L K +HA ++F K ++ ++IL+ GW
Sbjct: 164 IRAFDRMVEFGLKPTIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRAKTYSILVRGW 223
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ A K EM +Q + DV++Y +E +C+ + +EM G KP
Sbjct: 224 GDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFREMGSNGIKPDA 283
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
T++I + A +A I+ A +V ++MK D +P+ Y+ +I L K +V++A ++ +
Sbjct: 284 CTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEKVEEAYQLLNE 343
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
+ ++ P+ +YN +++ C SE +A +L+ +M +D C PD +Y LLK+ R R
Sbjct: 344 IIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNMLLKLLIRVGR 403
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFFEEMISKGIVPYHSTYK 515
+ M + TY+ +V GL + GKLE AC +FE MI +GI PY ST +
Sbjct: 404 FDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEACKYFEMMIDEGIPPYSSTVE 463
Query: 516 MLEEKL 521
+L +L
Sbjct: 464 ILRNRL 469
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 221 bits (564), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 142/444 (31%), Positives = 227/444 (51%), Gaps = 7/444 (1%)
Query: 90 SENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT 149
EN E V +I IL + S V L+ CGV+ S+ LV + L R N AF FF
Sbjct: 77 GENGEF-VRRIVDILQEPGSSMSLVKHKLESCGVAASSELVVEVLSRVRNHWEAAFTFFL 135
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG--YVSLATMSTIMRRL 207
WA Q GY H+ Y++M+ +LGK +KF W L+ EM G V+ T+S ++RR
Sbjct: 136 WAAKQPGYAHSLRAYHSMISILGKMRKFDTAWALIDEMRGGRTGTSLVTPHTLSIMIRRY 195
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ 267
A+ F K++ L+ L + +V+ A ++ ++ P ++
Sbjct: 196 CAVHDVGKAINTFYAHKQFKFGVGIEEFQNLLSALCRYKNVQDAEQLLFCNRNVFPFDTK 255
Query: 268 IFNILIHGWCKT-RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
FNI+++GWC + +A++ +EM +G DVVSY+ I Y + + KV +
Sbjct: 256 SFNIILNGWCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSKVTNLNKVLKLFNQ 315
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M+E P Y V+HAL KA + EAL + + M+ PD+ Y+SLI LS+A +
Sbjct: 316 MKEMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVTYNSLIKPLSRARK 375
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ +A E+F++M ++G+ P + TY+ +S EE LL+KM+E C PD +TY
Sbjct: 376 INEAKEVFDEMLQRGLSPTIRTYHAFFR--ILKSGEE-VFMLLEKMKETGCHPDKDTYIM 432
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L++ CR +++ + L + M +N V D +Y L+ GL +GKLE A ++ EM K
Sbjct: 433 LIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLEEAYKYYIEMKEKQ 492
Query: 507 IVPYHSTYKMLEEKLEKKRLGNAK 530
+P T ML+ + K + +
Sbjct: 493 FLPEPKTEDMLQAWISGKETADVR 516
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 130/427 (30%), Positives = 223/427 (52%), Gaps = 3/427 (0%)
Query: 97 VDKISKILSKQYQSPDKVVE-ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
+++IS+ILS ++ P +E L ++ LVEQ L+R N A FF WAK
Sbjct: 50 INEISRILS-DFRDPHHDLERPLTAFSQKITPGLVEQVLKRCKNLGFSAHRFFLWAKRLP 108
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ H+ E Y+ +VD+LG SK+F L+W+ + +M E + I R R D
Sbjct: 109 GFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGD 168
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
A+ AF M +GV+ + L+ L K V+ A + F + + +++ ++IL+ G
Sbjct: 169 AIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRG 228
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
W +A+K +EM ++G + DVV+Y +E C+ + + +EM G P
Sbjct: 229 WGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPD 288
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+Y+I + A + I+ A +V ++M+ + +P+ Y+ ++ L K+ +V +A ++ +
Sbjct: 289 ACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLD 348
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M ++GV P++ +YN + + C E AL+L+ +ME++ C PD TY +LKM R
Sbjct: 349 EMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVG 408
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFFEEMISKGIVPYHSTY 514
R + + M + A TYA +V G + GKLE AC +FE MI GI PY T
Sbjct: 409 RFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTV 468
Query: 515 KMLEEKL 521
++L ++
Sbjct: 469 ELLRNRV 475
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 221 bits (562), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 143/511 (27%), Positives = 253/511 (49%), Gaps = 19/511 (3%)
Query: 33 LCTTAESPSSTESPSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRL---NEKSRISSRVL 89
LCT A P+ + S+ PD + AG +H L + + + L
Sbjct: 57 LCTAA-GPTGAQYLSVDQHFTVVPGPGPD----VSKAAGLTGAHDLAVDQDFTVVPGPGL 111
Query: 90 SENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT 149
+ E + ++ ++LS + +V AL G SVS LV + L+ SN A FF
Sbjct: 112 DVSEEAE--RVCRVLSTLPEP--RVPAALDALGASVSPQLVAEVLKNLSNAGILALAFFR 167
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
WA+ Q G+++T + ++ +++ LGK K+F L+W LV+ M G +S T I+RR R
Sbjct: 168 WAERQQGFVYTADSFHNLIEALGKIKQFRLVWSLVEAMR--CRGLLSKDTFRLIVRRYAR 225
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---CIPLSS 266
+ +AVE F M +G++ D + L+D L K V+ A+ +F E K +P
Sbjct: 226 ARKVKEAVETFEKMAGFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVP-DL 284
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+ + +L+ GW + + + +EM G PDVV+Y I +C+ + +E
Sbjct: 285 KTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAIKVFRE 344
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M+ GC PS Y ++++ LG ++++EALK +E K+ + ++++ ++ +
Sbjct: 345 METNGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSK 404
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ A ++ ++M+K G+ PN TY+ ++ + E A + Q M +D C+P TY
Sbjct: 405 FQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQLNTYTM 464
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++ M C +R+ V + M + V +++L+ GL +LE AC++F+EM+ +G
Sbjct: 465 MVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQEMLDRG 524
Query: 507 IVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
I P + L+E L E R+ A+E KL
Sbjct: 525 IRPPGQLFSNLKEALIEGGRISLAQEMALKL 555
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 121/408 (29%), Positives = 215/408 (52%), Gaps = 3/408 (0%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKK 176
+L G+ VS +VE L+RF N A+ FF WA Q Y H+ Y+TM++ L K ++
Sbjct: 33 SLSESGIRVSPIVVENVLKRFENAGMLAYQFFEWAGKQRNYTHSIRAYHTMIESLAKIRQ 92
Query: 177 FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALS 236
+ +MW+LV +M L +++ T IMR+ R + +AV F M+KY V + A +
Sbjct: 93 YQIMWDLVNKMRSLK--ILNVETFCIIMRKYARSQKVKEAVYTFNIMEKYDVPPNLAAFN 150
Query: 237 VLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L+ L K +V A ++F KD S+ ++IL+ GW K + A++ +EM G
Sbjct: 151 SLLSALCKSKNVVKAQEIFNGMKDQFIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMG 210
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
PD+V+Y ++ C+ + +KEM CKP+ Y++++H G +I +A+
Sbjct: 211 CDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAV 270
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ M+ ++ D + Y++LI K ++K+A + +M +G+ PN T N +++S
Sbjct: 271 YTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSL 330
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
+ + + A ++ ++M + +C PD +TY ++KM C ++++ + +M
Sbjct: 331 ISCGDTDEAFRVFRRMIK-VCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSM 389
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
T++ L+ GL + G AC EEMI KGI P T+ L++ L K+
Sbjct: 390 HTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKE 437
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 142/306 (46%), Gaps = 6/306 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N+++ L KSK E+ M + T S ++ + A E FR M
Sbjct: 149 FNSLLSALCKSKNVVKAQEIFNGMKD--QFIPDSKTYSILLEGWGKAPNLPKAREIFREM 206
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
G + D +++D L K V+ A + E C P +S I+++L+H + +
Sbjct: 207 VDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKP-TSFIYSVLVHTYGIENR 265
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++DA +M + DV Y I +C+ + L EM KG +P+ T I
Sbjct: 266 IEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNI 325
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++L +EA +V+ +M C PD Y+ +I + + +++ A ++++ M+ +
Sbjct: 326 ILNSLISCGDTDEAFRVFRRM-IKVCDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQ 384
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
VP++ T++ +I+ C + A LL++M E +P T+ L ++ ++ R VL
Sbjct: 385 FVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQLLIKEGREDVLE 444
Query: 462 FLLTHM 467
FL M
Sbjct: 445 FLQEKM 450
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 157/352 (44%), Gaps = 19/352 (5%)
Query: 103 ILSKQYQSPDKVVEALKGCGV----------SVSNSLVEQTLRRFSNDLTPAFGFFTWAK 152
I+ ++Y KV EA+ + + NSL+ + S ++ A F K
Sbjct: 116 IIMRKYARSQKVKEAVYTFNIMEKYDVPPNLAAFNSLLSALCK--SKNVVKAQEIFNGMK 173
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
Q ++ + Y+ +++ GK+ E+ +EM ++ + T ++ L + GR
Sbjct: 174 DQ--FIPDSKTYSILLEGWGKAPNLPKAREIFREMVDMGCD-PDIVTYGIMVDILCKAGR 230
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNI 271
D+AV + M + + SVL+ T N +E A FL+ ++ I ++N
Sbjct: 231 VDEAVGIVKEMDSSVCKPTSFIYSVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNA 290
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI +CK K+ +A + + EM +G P+ + + D + + M K
Sbjct: 291 LIGAFCKVNKLKNAYRVLNEMDCKGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMI-KV 349
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C P TYT+++ + ++ ALKV++ M+ +P +S LI L K G A
Sbjct: 350 CDPDADTYTMMIKMFCENDKLEMALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKAC 409
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ-KMEEDLCKPDCE 442
+ E+M ++G+ P+ +T+ + + E+ L+ LQ KM + +P C+
Sbjct: 410 ILLEEMIEKGIRPSSVTFGKL-KQLLIKEGREDVLEFLQEKMNLLVKEPLCD 460
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 216/405 (53%), Gaps = 5/405 (1%)
Query: 122 GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ--TGYMHTPEMYNTMVDVLGKSKKFCL 179
GV V+ + E+ L R N A+ FF WA+ Q G HT Y+T+V L K +++ L
Sbjct: 63 GVRVTPEVAERVLERLDNAGMLAYRFFEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQL 122
Query: 180 MWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
MW++V M + G ++ T S IMR+ R ++D+AV F M++YGV + A + L+
Sbjct: 123 MWDVVAVMRK--EGVANVETFSIIMRKYARAQKFDEAVYTFNIMERYGVAHNLAAFNSLL 180
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L K +V A ++F + + ++ ++IL+ GW + + ++ +M G P
Sbjct: 181 GALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAAGCQP 240
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D+V+Y ++ C+ + +++M +GC+P+ Y++++H G +I +A+ +
Sbjct: 241 DIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATF 300
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
M+ D +PD Y++L+ K + +A + +DM+ G+ PN T+N ++++ +
Sbjct: 301 LDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNTLISL 360
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+++ A ++ + M + CKPD +TY ++KM C ++++ + +M T+
Sbjct: 361 GKDDEAYRVFRNMIKR-CKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTF 419
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ L+ GL + G++ AC E+MI KGI P ST+ L + L K+
Sbjct: 420 SVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKE 464
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 111/271 (40%), Gaps = 38/271 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ +++ G++ M E+ +M L G + T ++ L + GR ++AV +
Sbjct: 210 YSILLEGWGRAPNLPKMREVYSDM--LAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQD 267
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M G + T SVL+ T +E A FL+ KD I ++N L+ +CK +K
Sbjct: 268 MSSRGCQPTTFIYSVLVHTYGVDMRIEDAVATFLDMEKDGIVPDVVVYNALVTAFCKVKK 327
Query: 282 VDDAQKAMKEMFQQGFSP----------------------------------DVVSYTCF 307
D+A + M +M G SP D +YT
Sbjct: 328 FDNAFRVMDDMEGHGISPNSRTWNIILNTLISLGKDDEAYRVFRNMIKRCKPDSDTYTMM 387
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I+ +C K M+ K PS+ T++++++ L ++++A + E M
Sbjct: 388 IKMFCENDKIEMALKVWKYMRLKQFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGI 447
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
P S + L +L K GR + + E MK
Sbjct: 448 RPPGSTFGKLRQLLLKEGRKDVLDFLVEKMK 478
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 219 bits (558), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 213/426 (50%), Gaps = 1/426 (0%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V +IS+ILS + + L +VS LVEQ L+R N A FF WAK G
Sbjct: 51 VSEISRILSDRRNPHHDLEVGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWAKRIPG 110
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ + + Y+ +VD+LG S +F ++W+ + E+ E + ++ + R DA
Sbjct: 111 FEPSDDSYHIVVDILGSSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQDA 170
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
+ AF M ++G+ L L+ TL K V HA + F + K S + ++IL GW
Sbjct: 171 IRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGW 230
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
++AQK EM ++G DV++Y +E C+ + EM G P
Sbjct: 231 GVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDA 290
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TY+I + + + ++ +V E+ K + LP+ Y+ +I L K V++A +I ++
Sbjct: 291 DTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDE 350
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M ++GV P+ +YN + + C SE +AL L+++M+ D C PD TY +LK+ R R
Sbjct: 351 MIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGR 410
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFFEEMISKGIVPYHSTYK 515
N + M K TYA ++ G + KLE AC +FE MI +GI PY +T +
Sbjct: 411 FDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVE 470
Query: 516 MLEEKL 521
+L ++L
Sbjct: 471 LLRDRL 476
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/426 (30%), Positives = 213/426 (50%), Gaps = 1/426 (0%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V +IS+ILS + + L +VS LVEQ L+R N A FF WAK G
Sbjct: 51 VSEISRILSDRRNPHHDLEVGLSSFSSNVSTDLVEQVLKRCKNIAFSAHRFFLWAKRIPG 110
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ + + Y+ +VD+LG S +F ++W+ + E+ E + ++ + R DA
Sbjct: 111 FEPSDDSYHIVVDILGGSGQFAILWDFLIEIRETRSSVITHELFWHVFTAYSRADLPQDA 170
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
+ AF M ++G+ L L+ TL K V HA + F + K S + ++IL GW
Sbjct: 171 IRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVFNPSVKTYSILTRGW 230
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
++AQK EM ++G DV++Y +E C+ + EM G P
Sbjct: 231 GVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFLEMDSNGVDPDA 290
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TY+I + + + ++ +V E+ K + LP+ Y+ +I L K V++A +I ++
Sbjct: 291 DTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQNVEEAYQILDE 350
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M ++GV P+ +YN + + C SE +AL L+++M+ D C PD TY +LK+ R R
Sbjct: 351 MIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKHTYNMVLKLLVRVGR 410
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFFEEMISKGIVPYHSTYK 515
N + M K TYA ++ G + KLE AC +FE MI +GI PY +T +
Sbjct: 411 FDRANEVWESMGKRGFYPSVSTYAVMIHGFCKKKWKLEEACKYFEMMIDEGIPPYIATVE 470
Query: 516 MLEEKL 521
+L ++L
Sbjct: 471 LLRDRL 476
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 131/441 (29%), Positives = 230/441 (52%), Gaps = 8/441 (1%)
Query: 82 SRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDL 141
S + ++V + + D ++I KIL+K S KV L V +S +L+E+ L++ SN
Sbjct: 51 SSVETQVSANDASQDAERICKILTKFTDS--KVETLLNEASVKLSPALIEEVLKKLSNAG 108
Query: 142 TPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS 201
A F WA+ Q G+ HT YN +++ LGK K+F L+W LV +M +S T +
Sbjct: 109 VLALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMKA--KKLLSKETFA 166
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KD 260
I RR R + +A+ AF M+++G + ++ + ++DTL K +V A KVF + K
Sbjct: 167 LISRRYARARKVKEAIGAFHKMEEFGFKMESSDFNRMLDTLSKSRNVGDAQKVFDKMKKK 226
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
+ + IL+ GW + + + +EM +GF PDVV+Y I +C+ K + +
Sbjct: 227 RFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKYEEA 286
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
EM+++ CKPS + +++ LG K++N+AL+ +E+ KS + Y++L+
Sbjct: 287 IRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGA 346
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ R++DA + ++M+ +GV PN TY+ ++ + A ++ Q M C+P
Sbjct: 347 YCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTMS---CEPT 403
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY +++M C K+R+ + + M V ++SL+ L KL+ AC +F
Sbjct: 404 VSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFN 463
Query: 501 EMISKGIVPYHSTYKMLEEKL 521
EM+ GI P + L++ L
Sbjct: 464 EMLDVGIRPPGHMFSRLKQTL 484
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 126/272 (46%), Gaps = 7/272 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +++ G+ + E+ +EM + G+ + I+ + +Y++A+ F
Sbjct: 235 YTILLEGWGQELNLLRVDEVNREMKD--EGFEPDVVAYGIIINAHCKAKKYEEAIRFFNE 292
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
M++ + L++ L + A + F K PL + +N L+ +C +++
Sbjct: 293 MEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNALVGAYCWSQR 352
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++DA K + EM +G P+ +Y + H R ++ + + Q C+P+V TY I
Sbjct: 353 MEDAYKTVDEMRLKGVGPNARTYDIILHHLIR---MQRSKEAYEVYQTMSCEPTVSTYEI 409
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ ++++ A+K++++MK LP +SSLI L ++ +A E F +M G
Sbjct: 410 MVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACEYFNEMLDVG 469
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKME 433
+ P ++ + + ++ L+ KM+
Sbjct: 470 IRPPGHMFSRLKQTLLDEGRKDKVTDLVVKMD 501
>gi|357508583|ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 218 bits (555), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 130/438 (29%), Positives = 224/438 (51%), Gaps = 6/438 (1%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
DV I I+ K P ++ + L+ C V S+ LV + L R ND AF FF WA Q
Sbjct: 100 DVKTILDIIHKPGSGPYEIKQKLEDCNVKASSELVVEVLSRVRNDWEAAFTFFLWAGKQP 159
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG--YVSLATMSTIMRRLVRGGRY 213
GY H+ Y++M+ VLGK ++F W LV+EM G V+ T+ ++R+
Sbjct: 160 GYDHSVREYHSMISVLGKMRRFDTAWALVEEMRRGKTGESIVTPQTLLIMIRKYCAVHDV 219
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
A+ F K++ + L+ L + +V+ A + K+ PL ++ FNI++
Sbjct: 220 GRAINTFYAFKRFNFQVGLYEFQGLLSALCRYKNVQDAEHLLFCNKNVFPLDTKSFNIIL 279
Query: 274 HGWCK-TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+GWC +A++ +EM ++ DVVSY I Y + +V ++M+++
Sbjct: 280 NGWCNLIVSARNAERIWEEMSKRRIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNI 339
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P Y V+ +L K + + EA+ + KM+ ++ PD Y+SLI L KA ++ +A E
Sbjct: 340 TPDRKVYNAVIFSLAKNRMVKEAVNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKE 399
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
IF M ++G+ P++ T++ R +EE +LL KM+E C P ETY L++ C
Sbjct: 400 IFNVMLERGISPSIRTFHAFFR--ILRVKEE-VFELLDKMKELGCNPTIETYIMLIRKFC 456
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
R +++ + + M ++ + D +Y L+ GL + K+E A ++ EM KG +P
Sbjct: 457 RWRQLDEVKRIWNAMREDGIGHDRSSYIVLIHGLFLNCKVEEAYKYYIEMQEKGFLPEPK 516
Query: 513 TYKMLEEKLEKKRLGNAK 530
T ML+ L +++ +++
Sbjct: 517 TESMLQAWLSGRQVTDSQ 534
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 218 bits (555), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 132/439 (30%), Positives = 227/439 (51%), Gaps = 8/439 (1%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
D I IL + + ++ ++ CG+ VS LV + L R ND AF FF WA Q
Sbjct: 24 DAKTIVNILQESCDNRVEMKSKIEQCGIKVSQELVLEVLSRVRNDWEAAFTFFLWAARQP 83
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM---RRLVRGGR 212
GY H+ Y++M+ +LGK +KF W L+ EM + G VSL T T++ R+
Sbjct: 84 GYAHSVREYHSMISILGKMRKFDTAWVLIDEMRGVKTG-VSLVTPQTLLIMIRKYCAVHD 142
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNIL 272
A+ F K++ + L+ L + +V+ A ++ K PL+++ FNI+
Sbjct: 143 VGRAINTFYAYKRFKFDMGIEEFQSLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSFNIV 202
Query: 273 IHGWCK-TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++GWC ++++ +EM ++G DVVSY + Y + +V K+M++ G
Sbjct: 203 LNGWCNLIGSPRESERVWREMSKRGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIG 262
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+P Y V+HAL K + +NEA + + M+ P+ Y+SLI L +A +V++A
Sbjct: 263 IEPDRKVYNAVIHALAKGRLVNEAFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAK 322
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
F+DM K+ + P + TY+ + R+ EE LL+KM + C+P +TY L++
Sbjct: 323 GAFDDMLKRCISPTIRTYHAFLR--ILRTGEE-VFALLEKMRKMGCQPINDTYIMLIRKF 379
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
CR ++++ + L M +N +S D +Y L+ GL +G+L+ A ++ EM K ++P
Sbjct: 380 CRWRQLENVFKLWDEMSENGISPDRSSYIVLIHGLFLNGELDAAHKYYTEMKEKQLLPEP 439
Query: 512 STYKMLEEKLEKKRLGNAK 530
+ML+ L K++ +
Sbjct: 440 KIDEMLQTWLSNKQIAEGQ 458
>gi|356570295|ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 516
Score = 218 bits (554), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 131/439 (29%), Positives = 222/439 (50%), Gaps = 6/439 (1%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
DV I I+ + P + + L+ C V +S LV + L R ND AF FF WA Q
Sbjct: 31 DVKTILDIMHEMGSGPSQTKQKLEHCSVDLSAKLVVEVLLRTRNDWEAAFTFFLWAGKQP 90
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG--YVSLATMSTIMRRLVRGGRY 213
GY H+ Y++M+ +LGK +KF W L++EM G V+ T+ ++R+
Sbjct: 91 GYAHSIREYHSMISILGKMRKFDTAWNLIEEMRRGRTGPSLVTPQTLLIMIRKYCAVHDV 150
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
A+ F K++ + L+ L + +V+ A + K+ PL ++ FNI++
Sbjct: 151 ARAINTFYAYKQFNFQVGLEEFHSLLSALCRYKNVQDAEHLLFCNKNLFPLDTKSFNIIL 210
Query: 274 HGWCK-TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+GWC A++ EM ++ DVVSY I Y + KV EM+++
Sbjct: 211 NGWCNLIVSTSHAERIWHEMSKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRKI 270
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P Y V++AL K + + EA+ + ++ +D P+ Y+SLI L KAG+V +A +
Sbjct: 271 TPDRKVYNAVIYALAKGRLVKEAVNLIGTLEDNDVTPNVVTYNSLIKPLCKAGKVDEAKQ 330
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+F ++ K+ + P + T++ R++EE +LL KM+E C P ETY L++ C
Sbjct: 331 LFYEILKRHLSPTIQTFHAFFR--ILRTKEE-VFELLDKMKELGCYPTIETYIMLMRKFC 387
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
R +++ + + M ++ + D +Y L+ GL +GKLE A +++ EM KG +P
Sbjct: 388 RWRQLDDVFKMWDAMREDGIGHDRSSYIVLIHGLFLNGKLEEAHTYYAEMQEKGFLPEPK 447
Query: 513 TYKMLEEKLEKKRLGNAKE 531
T +ML+ + K+ +E
Sbjct: 448 TEEMLQAWVSGKQATEGQE 466
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 140/469 (29%), Positives = 228/469 (48%), Gaps = 26/469 (5%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
DV I IL + +P ++ ++ CGV VS LV + L R ND AF FF WA Q
Sbjct: 96 DVTIIMSILHQLSGNPVEMKNKIEHCGVKVSRELVLEVLSRIRNDWEAAFTFFLWAGRQL 155
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM---RRLVRGGR 212
GY H+ Y+ M+ +LGK +KF W L+ EM + G +SL T T++ R+
Sbjct: 156 GYSHSVREYHAMISILGKMRKFDTAWALIDEMRGVKTG-ISLVTPQTLLIMIRKYCAVHD 214
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNIL 272
A+ F K++ + L+ L + +V+ A + KD P +++ FNI+
Sbjct: 215 VGRAINTFYAHKRFKFDLGIDEFQSLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIV 274
Query: 273 IHGWCKT-RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++GWC +A + +EM ++ DVVSY I Y + + KV +M+E G
Sbjct: 275 LNGWCNVIGSPREADRIWREMCKRRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEVG 334
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+P Y V+ AL K + ++EA+ + + M+ P+T Y+SLI L +A ++ +A
Sbjct: 335 IEPDRKIYNSVIFALAKGRHVSEAINLMKTMEEKGIAPNTVTYNSLIKPLCRARKIDEAR 394
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+F++M + G P + TY+ S R+ EE LL+ M + C P +TY L++
Sbjct: 395 GLFDEMLQHGHSPTIRTYHAFFRS--LRTGEE-VFALLENMRKLGCHPTIDTYIMLIRKF 451
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
CR ++ + L + +N + D +Y L+ GL +GKLE A F+ +M K ++P
Sbjct: 452 CRWRQFDDVFKLWNQISENGLGPDRSSYIVLIHGLFLNGKLEEAYKFYADMKEKQLLPDP 511
Query: 512 STYKMLEEKLEKK------------------RLGNAKERINKLLAHAKE 542
+ML+ L K RLGN + +K + H K+
Sbjct: 512 KLDEMLQTWLSNKQVAECQMTESKVDQLDCSRLGNQRRATSKRINHEKD 560
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 217 bits (553), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/447 (29%), Positives = 223/447 (49%), Gaps = 13/447 (2%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
+DV+K+ ++L K + K+ AL+ GV + N L E+ L R + A+ FF WA Q
Sbjct: 49 SDVEKVYRLLRKFHSRVPKLELALQESGVVLRNGLTERVLNRCGDAGILAYKFFVWASKQ 108
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
Y H E Y M+ VL K K+F +W L++EM N+ ++ +MRR +
Sbjct: 109 PCYRHCYENYKAMIKVLSKMKQFGAVWALLEEMRRDNSVLITSEVFVVVMRRFASSRMVN 168
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
A+E M KYG E D L+D L K SV+ A +F + + S + F L++
Sbjct: 169 KAIEVLDEMPKYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMRVRFSPSLKHFTCLLY 228
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
GWCK K+ +A+ + +M + GF PD+V Y + Y D LKE++ KGC P
Sbjct: 229 GWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMGDAFDLLKEIRRKGCDP 288
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ +YTI++ AL ++++EA++V+ +M+ C D Y++L+ K + +I
Sbjct: 289 NATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALVSGFCKWRMIDKGYQIL 348
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ M ++G +PN LTY ++ + + E E +L+ +M++ C PD Y ++++ C+
Sbjct: 349 QSMIQKGHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKIGCIPDLSIYNVVIRLACKL 408
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ M + +S T+ ++ G + G L AC +F+EM+ +G+
Sbjct: 409 GEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEACQYFKEMVERGL------- 461
Query: 515 KMLEEKLEKKRLGNAKERINKLLAHAK 541
L ++ G K+ +N LL K
Sbjct: 462 ------LSSRQYGILKDLLNALLRGEK 482
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 78/375 (20%), Positives = 130/375 (34%), Gaps = 101/375 (26%)
Query: 119 KGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT-----WAK--------------TQTGYMH 159
K V + SL E RFS P+ FT W K + G+
Sbjct: 198 KNGSVKEAASLFEDMRVRFS----PSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEP 253
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGG-RYDDAVE 218
+YN ++ + K ++L+KE+ G AT TI+ + + G + D+A+
Sbjct: 254 DIVVYNNLLSGYATAGKMGDAFDLLKEIRR--KGCDPNATSYTILIQALCGQEKMDEAMR 311
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF----------------------- 255
F M++ G + D + L+ K ++ Y++
Sbjct: 312 VFVEMERSGCDADVVTYTALVSGFCKWRMIDKGYQILQSMIQKGHMPNQLTYLHLMLAHE 371
Query: 256 --------------LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
++ CIP S I+N++I CK +V+ A EM G SP +
Sbjct: 372 KKEELEECKELMGEMQKIGCIPDLS-IYNVVIRLACKLGEVNAGVDAWNEMEVSGLSPGL 430
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQE-------------------------------- 329
++ I + + KEM E
Sbjct: 431 DTFVIMINGFLGHGYLVEACQYFKEMVERGLLSSRQYGILKDLLNALLRGEKLELAKDLW 490
Query: 330 -----KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
KGC+ +V ++TI +HAL + EA M D +P ++ L+ L K
Sbjct: 491 SCIVTKGCELNVDSWTIWIHALFSNGHVKEACSYCLDMMDADLMPKPETFAKLMRGLRKL 550
Query: 385 GRVKDANEIFEDMKK 399
+ A EI E ++K
Sbjct: 551 YNRQFAAEITEKVRK 565
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 128/444 (28%), Positives = 230/444 (51%), Gaps = 9/444 (2%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
+++ +++S Q + ++ AL GV++S LV + LR SN A FF WA+ Q G
Sbjct: 99 AERVCRVVSSQPEP--RIASALDALGVNMSPELVAEVLRNLSNAGILALAFFRWAERQQG 156
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ +T E ++ +++ LGK K+F L+W LV+ M G +S T I+RR R + +A
Sbjct: 157 FRYTAESFHNLIEALGKIKQFRLVWSLVEAMR--CRGLLSKDTFRLIVRRYARARKVKEA 214
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---CIPLSSQIFNILI 273
VE F M +G++ D + L+D L K V+ A+ +F E K +P + + +L+
Sbjct: 215 VETFEKMSSFGLKADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGRFVP-DLKTYTVLM 273
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
GW + + + +EM G PDVV+Y I +C+ + +EM+ GC
Sbjct: 274 EGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAIKVFREMEANGCM 333
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
PS Y ++++ LG ++++EALK +E K+ + ++++ ++ + + A ++
Sbjct: 334 PSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAYCRSSKFQHAFKM 393
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
++M+K G+ PN TY+ ++ + E A + Q+M + C+P TY ++ M C
Sbjct: 394 VDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQLNTYTMMVGMFCS 453
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+R+ + + M + V ++SL+ GL +LE AC +F+EM+ KGI P
Sbjct: 454 NERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQEMLDKGIRPPGQL 513
Query: 514 YKMLEEKL-EKKRLGNAKERINKL 536
+ L+E L E R+ A++ KL
Sbjct: 514 FSNLKEALIEGGRISLAQDMALKL 537
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 217 bits (552), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 228/444 (51%), Gaps = 9/444 (2%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
+++ +++S Q + ++ L GV+VS LV + L+ SN A FF WA+ Q G
Sbjct: 92 AERVCRVVSAQPE--HRIAPVLDALGVTVSPQLVAEVLKNLSNAGILALAFFRWAERQQG 149
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ ++ E ++ +++ LGK K+F L+W LV+ M +S T I+RR R + +A
Sbjct: 150 FRYSAEGFHNLIEALGKIKQFRLVWSLVEAMR--CRSCLSKDTFKIIVRRYARARKVKEA 207
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---CIPLSSQIFNILI 273
VE F M +G++ D + L+D L K V+ A+ +F E K IP + + +L+
Sbjct: 208 VETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIP-DLKTYTVLM 266
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
GW + + + +EM G PDVV+Y I +C+ + EM+E GC
Sbjct: 267 EGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCM 326
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
PS Y ++++ LG ++++EALK ++ K + +++I +A A ++
Sbjct: 327 PSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKM 386
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
++M+K G+ PN TY+ +++ + E A L Q+ME D C+P+ TY ++ M C
Sbjct: 387 VDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCS 446
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+R+ + + M + V +++L+ GL +LE AC +F+EM+ KGI P
Sbjct: 447 NERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQL 506
Query: 514 YKMLEEKL-EKKRLGNAKERINKL 536
+ L+E L E R+ A+E +L
Sbjct: 507 FSNLKEALVEGGRITLAQEVTQRL 530
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 93/188 (49%), Gaps = 1/188 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFN 270
R D+A++ F+ K+ G + + ++ + HA+K+ E K I +++ ++
Sbjct: 344 RLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYD 403
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
I+++ K+ K+++A + M + G P++ +YT + +C + K+M+EK
Sbjct: 404 IILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEK 463
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P + ++ +++ L ++ EA +++M P +S+L L + GR+ A
Sbjct: 464 GVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLA 523
Query: 391 NEIFEDMK 398
E+ + ++
Sbjct: 524 QEVTQRLE 531
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 130/444 (29%), Positives = 228/444 (51%), Gaps = 9/444 (2%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
+++ +++S Q + ++ L GV+VS LV + L+ SN A FF WA+ Q G
Sbjct: 92 AERVCRVVSAQPE--HRIAPVLDALGVTVSPQLVAEVLKNLSNAGILALAFFRWAERQQG 149
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ ++ E ++ +++ LGK K+F L+W LV+ M +S T I+RR R + +A
Sbjct: 150 FRYSAEGFHNLIEALGKIKQFRLVWSLVEAMR--CRSCLSKDTFKIIVRRYARARKVKEA 207
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---CIPLSSQIFNILI 273
VE F M +G++ D + L+D L K V+ A+ +F E K IP + + +L+
Sbjct: 208 VETFEKMSSFGLKTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGRFIP-DLKTYTVLM 266
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
GW + + + +EM G PDVV+Y I +C+ + EM+E GC
Sbjct: 267 EGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAIKVFHEMEESGCM 326
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
PS Y ++++ LG ++++EALK ++ K + +++I +A A ++
Sbjct: 327 PSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKM 386
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
++M+K G+ PN TY+ +++ + E A L Q+ME D C+P+ TY ++ M C
Sbjct: 387 VDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCS 446
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+R+ + + M + V +++L+ GL +LE AC +F+EM+ KGI P
Sbjct: 447 NERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQL 506
Query: 514 YKMLEEKL-EKKRLGNAKERINKL 536
+ L+E L E R+ A+E +L
Sbjct: 507 FSNLKEALVEGGRITLAQEVTQRL 530
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 93/188 (49%), Gaps = 1/188 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFN 270
R D+A++ F+ K+ G + + ++ + HA+K+ E K I +++ ++
Sbjct: 344 RLDEALKYFQLSKESGFPMEVPTCNAVIGAYCRALEFHHAFKMVDEMRKSGIGPNTRTYD 403
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
I+++ K+ K+++A + M + G P++ +YT + +C + K+M+EK
Sbjct: 404 IILNHLIKSEKIEEAYNLFQRMERDGCEPELNTYTMMVGMFCSNERVDMALKVWKQMKEK 463
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P + ++ +++ L ++ EA +++M P +S+L L + GR+ A
Sbjct: 464 GVLPCMHMFSALINGLCFDNRLEEACVYFQEMLDKGIRPPGQLFSNLKEALVEGGRITLA 523
Query: 391 NEIFEDMK 398
E+ + ++
Sbjct: 524 QEVTQRLE 531
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 212/405 (52%), Gaps = 5/405 (1%)
Query: 122 GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ--TGYMHTPEMYNTMVDVLGKSKKFCL 179
GV V+ + E+ L R N A+ FF WA+ Q G HT Y+T+V L K +++ L
Sbjct: 60 GVRVTPDVAERVLERLDNAGMLAYRFFEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQL 119
Query: 180 MWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
MW++V M G V++ T IMR+ R + D+AV F M+KYGV + A + L+
Sbjct: 120 MWDVVAVMRR--EGAVNVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLL 177
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L K +V A ++F + ++ ++IL+ GW + + ++ EM G P
Sbjct: 178 GALCKSKNVRKAQEIFDKMNSRFSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEP 237
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D+V+Y ++ C+ + +++M +GC+P+ Y++++H G +I +A+ +
Sbjct: 238 DIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATF 297
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
M+ D +PD Y++L+ KA + ++A + DM+ G+ N T+N +++ +
Sbjct: 298 LDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNHLISL 357
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
++ A K+ ++M + C+PDC+TY ++KM C ++++ + +M T+
Sbjct: 358 GRDDEAYKVFRRMIK-CCQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPSMHTF 416
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ L+ GL + ++ AC E+MI KGI P ST+ L + L K+
Sbjct: 417 SVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKE 461
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 114/252 (45%), Gaps = 17/252 (6%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETD-------VDKISKILSKQYQSP 111
SPD L GW + L + + S +L E D VD + K + + +
Sbjct: 201 SPDAKTYSILLEGWGRAPNLPKMREVYSEMLDAGCEPDIVTYGIMVDSLCK--TGRVEEA 258
Query: 112 DKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ-TGYMHTPEMYNTMVDV 170
+VV+ + G + + + + ++ T+ + G + +YN +V
Sbjct: 259 VRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDAVATFLDMEKDGIVPDIVVYNALVSA 318
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
K+KKF + ++ +M+ +G + + T + I+ L+ GR D+A + FR M K +
Sbjct: 319 FCKAKKFENAFRVLNDME--GHGITTNSRTWNIILNHLISLGRDDEAYKVFRRMIKC-CQ 375
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
D ++++ + + VE A KV ++ K +P S F++LI+G C R+V A
Sbjct: 376 PDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLP-SMHTFSVLINGLCDKREVSQACV 434
Query: 288 AMKEMFQQGFSP 299
+++M ++G P
Sbjct: 435 LLEDMIEKGIRP 446
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 216 bits (551), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 132/433 (30%), Positives = 220/433 (50%), Gaps = 8/433 (1%)
Query: 96 DVDKISKILSKQYQSPDK--VVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
DVD I I + ++ ++ V L+ C + VS LV L R ND AF FF WA
Sbjct: 11 DVDAIMDIF-RGFRDANRIQVRNKLEHCFIKVSGELVVAVLSRIRNDWEAAFTFFVWAGK 69
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG--YVSLATMSTIMRRLVRGG 211
Q GY H+ Y++M+ +LGK +KF W L+ EM G V+ T+ ++RR
Sbjct: 70 QPGYAHSVREYHSMISILGKMRKFDTAWALIDEMRGGTPGSSLVTPQTLLIMIRRYCAVH 129
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI 271
A+ F K++G L+ L + +V+ A + KD P +++ FNI
Sbjct: 130 DVAKAINTFYAHKRFGFNIGLEEFQSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNI 189
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+++GWC + D ++ KEM ++G S D VSY I Y + ++ KV ++M+
Sbjct: 190 ILNGWCVIGSLRDTERVWKEMTRRGISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMK 249
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P Y V+H+L K + + EA + + M+ + + Y+S+I L KA R +A
Sbjct: 250 IDPDRKVYNAVIHSLAKGRCLKEAADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEAR 309
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+FE++ ++G+ P + TY+ + R+EEE +LL+KM C P +TY L++
Sbjct: 310 AVFEELLQRGLCPTIQTYHAFLR--FLRTEEE-IFELLKKMRTMGCNPTTDTYIMLIRKF 366
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
CR +++ ++ + M +N +S D +Y L+ GL +GKLE A ++ EM K ++P
Sbjct: 367 CRWRQLDNVSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLEDAHKYYLEMKEKDLLPEP 426
Query: 512 STYKMLEEKLEKK 524
++L+ L K
Sbjct: 427 KIDEVLQTWLAGK 439
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 215 bits (547), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 214/405 (52%), Gaps = 5/405 (1%)
Query: 122 GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYM--HTPEMYNTMVDVLGKSKKFCL 179
GV V+ + E L+ N A+ FF WA+ Q + HT Y+T+V L K +++ L
Sbjct: 65 GVRVTPEIAESVLKHLDNAGMLAYRFFEWARKQKRGVCAHTVRSYHTVVTSLAKIRQYQL 124
Query: 180 MWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
MW++V M + G ++ T IMR+ R + D+AV F M+KYGV + A + L+
Sbjct: 125 MWDVVAIMRK--EGVANVETFGIIMRKYARAQKLDEAVYTFNVMEKYGVAHNLAAFNSLL 182
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L K +V A ++F + + ++ ++IL+ GW + + ++ +M G P
Sbjct: 183 SALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPSLPKMREVYSDMLAAGCQP 242
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D+V+Y ++ C+ + +++M +GC+P+ Y+I++H G +I +A+ +
Sbjct: 243 DIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMRIEDAVAAF 302
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
M+ D +PD Y++LI K + ++A + +DM+ G+ PN T+N ++++ +
Sbjct: 303 LDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNIILNTLISL 362
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+++ A ++ + M + CKPD +TY ++KM C ++++ + +M T+
Sbjct: 363 GKDDEAYRVFRSMIKR-CKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPSMHTF 421
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ L+ GL + G++ AC E+MI KGI P ST+ L + L K+
Sbjct: 422 SVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKE 466
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 2/188 (1%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFN 270
R +DAV AF M+K G+ D + L+ K E+A++V + + I +S+ +N
Sbjct: 294 RIEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWN 353
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
I+++ K D+A + + M ++ PD +YT I+ +C K M+ K
Sbjct: 354 IILNTLISLGKDDEAYRVFRSMIKRC-KPDSDTYTMMIKMFCENDKIEMALKVWKYMRLK 412
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
PS+ T++++++ L ++++A + E M P S + L +L K GR
Sbjct: 413 QFLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVL 472
Query: 391 NEIFEDMK 398
+ + E MK
Sbjct: 473 DFLVEKMK 480
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 241/472 (51%), Gaps = 16/472 (3%)
Query: 84 ISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTP 143
IS ++SE DV KISK++ ++ L+ C V SN LV + L R ND
Sbjct: 88 ISDELVSE----DVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWET 143
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
AF FF WA Q GY+ + Y++M+ +LGK +KF W L+ EM + + V+ T+ +
Sbjct: 144 AFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIM 203
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
+R+ A+ F K++ +E L+ L + +V A + KD P
Sbjct: 204 IRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYP 263
Query: 264 LSSQIFNILIHGWCKT-RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
++ FNI+++GWC +A++ EM G DVVSY+ I Y + KV
Sbjct: 264 FDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 323
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL-PDTSFYSSLIFIL 381
M+++ +P Y V+HAL KA ++EA + + M+ + + P+ Y+SLI L
Sbjct: 324 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPL 383
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
KA + ++A ++F++M ++G+ P + TY+ + R+ EE +LL KM + C+P
Sbjct: 384 CKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR--ILRTGEE-VFELLAKMRKMGCEPTV 440
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
ETY L++ CR + + L M + V D +Y ++ GL +GK+E A +++E
Sbjct: 441 ETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKE 500
Query: 502 MISKGIVPYHSTYKMLE-----EKLEKKRLGNAKERINK--LLAHAKEQKTF 546
M KG+ P + M++ ++ ++R+ ++K +NK ++ ++ +K F
Sbjct: 501 MKDKGMRPNENVEDMIQSWFSGKQYAEQRITDSKGEVNKGAIVKKSEREKNF 552
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 114/404 (28%), Positives = 213/404 (52%), Gaps = 5/404 (1%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ--TGYMHTPEMYNTMVDVLGKSKKFCLM 180
+ V+ + E+ L R N A+ FF WA+ Q G HT Y+T+V L K +++ LM
Sbjct: 63 LRVTPDVAERVLERLDNAGMLAYRFFEWARKQKRGGCNHTIRSYHTVVASLAKIRQYQLM 122
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
W++V M G V++ T IMR+ R ++D+AV F M+KYGV + A + L+
Sbjct: 123 WDVVAIMRR--EGVVNVETFGIIMRKYARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLG 180
Query: 241 TLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
L K +V A ++F + ++ ++IL+ GW K + ++ EM G PD
Sbjct: 181 ALCKSKNVRKAQEIFDKMNGRFNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPD 240
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+V+Y ++ C+ + +++M +GC+P+ Y++++H G +I +A+ +
Sbjct: 241 IVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFL 300
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
M+ D +PD Y++L+ K + ++A + +DM+ G+ PN T+N +++ +
Sbjct: 301 DMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLG 360
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+++ A ++ ++M + C+PD +TY ++KM C +++ + +M T++
Sbjct: 361 KDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLPSMHTFS 419
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
L+ GL + G++ AC E+MI KGI P ST+ L + L K+
Sbjct: 420 VLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKE 463
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 215 bits (547), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 125/436 (28%), Positives = 223/436 (51%), Gaps = 8/436 (1%)
Query: 90 SENHET--DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGF 147
+ NH D K+ K+L S + L G V VS +LV + L++ SN A F
Sbjct: 74 ATNHHIAQDTGKLCKLLCTHSNS--SIESLLNGASVDVSPTLVLEVLKKLSNSGVIALSF 131
Query: 148 FTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRL 207
F WA+ Q G+ ++ E YN +++ LGK K+F ++W LV +M + G ++ T + I RR
Sbjct: 132 FRWAEKQKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMR--SKGLLTQETFALISRRY 189
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSS 266
R + +AVE F M+K+G++ + L+D L K VE A +VF + KD
Sbjct: 190 ARARKVKEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDI 249
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+ + IL+ GW + + + + +EM +GF PD V+Y I +C+ + + + +
Sbjct: 250 KSYTILLEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHK 309
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M+ C P+ Y +++ LG +++ EAL+ +E+ K+ P+ Y++++ ++ R
Sbjct: 310 MEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMR 369
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM-EEDLCKPDCETYA 445
+ DA I ++M+K GV P TY+ ++ + A ++ Q M E C+P TY
Sbjct: 370 MDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYE 429
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
+++M C ++R+ + + M V +++L+ L KL+ AC +F EM+
Sbjct: 430 IVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDM 489
Query: 506 GIVPYHSTYKMLEEKL 521
GI P + + L++ L
Sbjct: 490 GIRPPAAMFSNLKQTL 505
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 129/274 (47%), Gaps = 5/274 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRG 222
Y +++ G+ + + E+ +EM + G+ A T ++ + RYD AVE F
Sbjct: 252 YTILLEGWGQEQNLLRLDEVYREMKD--EGFEPDAVTYGILINAHCKARRYDAAVELFHK 309
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRK 281
M+ L++ L + A + F K + +N ++ +C++ +
Sbjct: 310 MEANKCMPTPHIYCTLINGLGSERRLTEALQFFERSKASGFTPEAPTYNAVVGSYCQSMR 369
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ-EKGCKPSVITYT 340
+DDA + + EM + G P +Y + H + + ++ + M E GC+PSV TY
Sbjct: 370 MDDAYRIVDEMRKCGVGPQTRTYDIILHHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYE 429
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
IV+ ++++ AL+V+++MK+ LP +S+LI L ++ +A + F +M
Sbjct: 430 IVVRMFCNEERVDMALRVWDEMKAKGVLPGMHMFSTLINSLCYENKLDEACKYFHEMLDM 489
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
G+ P ++ + + +++ L L QK+++
Sbjct: 490 GIRPPAAMFSNLKQTLLDEGKQDMVLILAQKLDK 523
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 95/198 (47%), Gaps = 1/198 (0%)
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++KG K S Y ++ ALGK KQ + M+S L +F + + ++A +V
Sbjct: 137 KQKGFKYSTENYNALIEALGKIKQFKMIWNLVNDMRSKGLLTQETF-ALISRRYARARKV 195
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
K+A E FE M+K G+ P + +N ++ + C E A ++ KM++ +PD ++Y L
Sbjct: 196 KEAVETFEKMEKFGLQPVLSDFNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTIL 255
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
L+ +++ + L+ + M DA TY L+ ++ + + A F +M +
Sbjct: 256 LEGWGQEQNLLRLDEVYREMKDEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKC 315
Query: 508 VPYHSTYKMLEEKLEKKR 525
+P Y L L +R
Sbjct: 316 MPTPHIYCTLINGLGSER 333
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 118/400 (29%), Positives = 214/400 (53%), Gaps = 3/400 (0%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
+ VS SLV + L++ SN A FF WA+ Q G+ ++ E Y+ +++ LGK K+F ++W
Sbjct: 1 MEVSPSLVFEALKKLSNAGALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIWN 60
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
LV +M + G ++ T + I RR R + +AV+AF M+K+G++ ++ ++ L+DTL
Sbjct: 61 LVTDMKQ--KGLLNKETFALISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTL 118
Query: 243 VKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
K VE A VF + K + + IL+ GW + + + + EM +GF PDV
Sbjct: 119 CKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEGFEPDV 178
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
V+Y I +C+ + + + EM+ K CKPS Y +++ LG K+++EAL+ +E
Sbjct: 179 VTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEALEFFEL 238
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
K+ +P+ Y++++ + R+ D ++M+K GV P+ TY+ ++ +
Sbjct: 239 SKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGK 298
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
+ A + QKM + C+P TY +++M C + R+ + + M + +++
Sbjct: 299 TKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFST 358
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ L KL+ AC +F+EM+ GI P + L++ L
Sbjct: 359 LINSLCHESKLDEACMYFQEMLDVGIRPPAQLFSNLKQNL 398
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 146/323 (45%), Gaps = 19/323 (5%)
Query: 103 ILSKQYQSPDKVVEALKGC------GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAK-TQT 155
++S++Y KV EA+ G+ + +S V + L + K +
Sbjct: 78 LISRRYARARKVKEAVDAFMKMEKFGLKIESSDVNRLLDTLCKSRQVERAQLVFDKMNKR 137
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G++ + Y +++ G+ K + E+ EM + G+ + T ++ + RYD
Sbjct: 138 GFVADIKSYTILLEGWGQEKNLSRLMEVYNEMK--DEGFEPDVVTYGILINAHCKSRRYD 195
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-----F 269
DA+E F M+ K+ + + TL+ G E LEF + S + +
Sbjct: 196 DAIELFHEMEA----KNCKPSPHIYCTLINGLGAEKRLSEALEFFELSKASGFVPEAPTY 251
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N ++ +C + ++DD Q+ + EM + G P +Y + H R + ++M
Sbjct: 252 NAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMSC 311
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+GC+PSV TY I++ +++ A+KV+++MK+ LP +S+LI L ++ +
Sbjct: 312 EGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLDE 371
Query: 390 ANEIFEDMKKQGVVPNVLTYNTM 412
A F++M G+ P ++ +
Sbjct: 372 ACMYFQEMLDVGIRPPAQLFSNL 394
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 113/405 (27%), Positives = 212/405 (52%), Gaps = 6/405 (1%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ---TGYMHTPEMYNTMVDVLGKSKKFCL 179
+ V+ + E+ L R N A+ FF WA+ Q G HT ++T+V L K +++ L
Sbjct: 61 LRVTPDVAERVLERLDNAGMLAYRFFEWARKQRRGGGCAHTVRSFHTVVASLAKIRQYQL 120
Query: 180 MWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
MW++V M G V++ T IMR+ R + D+AV F M+KYGV + A + L+
Sbjct: 121 MWDVVAIMRR--QGVVNVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVPNLAAFNSLL 178
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L K +V A ++F + ++ ++IL+ GW + + +K +M G P
Sbjct: 179 CALCKSKNVRKAQEIFEQMNGRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLDAGCQP 238
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D+V+Y ++ C+ + +++M +GC+P+ Y++++H G +I +A+ +
Sbjct: 239 DIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIEDAVATF 298
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
M+ D +PD Y++L+ K + +A + +DM+ G+ PN T+N +++ +
Sbjct: 299 LDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILNKLISL 358
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+++ A ++ ++M + C+PD +TY ++KM C R+++ + +M T+
Sbjct: 359 GKDDEAYRVFRRMIKR-CQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLPSMHTF 417
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ L+ GL + G++ AC E+MI KGI P ST+ L + L K+
Sbjct: 418 SVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKE 462
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 214 bits (546), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 139/472 (29%), Positives = 241/472 (51%), Gaps = 16/472 (3%)
Query: 84 ISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTP 143
IS ++SE DV KISK++ ++ L+ C V SN LV + L R ND
Sbjct: 48 ISDELVSE----DVGKISKLVKDCGSDRKELRNKLEECDVKPSNELVVEILSRVRNDWET 103
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
AF FF WA Q GY+ + Y++M+ +LGK +KF W L+ EM + + V+ T+ +
Sbjct: 104 AFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIM 163
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
+R+ A+ F K++ +E L+ L + +V A + KD P
Sbjct: 164 IRKYCAVHDVGKAINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAGHLIFCNKDKYP 223
Query: 264 LSSQIFNILIHGWCKT-RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
++ FNI+++GWC +A++ EM G DVVSY+ I Y + KV
Sbjct: 224 FDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLK 283
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL-PDTSFYSSLIFIL 381
M+++ +P Y V+HAL KA ++EA + + M+ + + P+ Y+SLI L
Sbjct: 284 LFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNVVTYNSLIKPL 343
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
KA + ++A ++F++M ++G+ P + TY+ + R+ EE +LL KM + C+P
Sbjct: 344 CKARKTEEAKQVFDEMLEKGLFPTIRTYHAFMR--ILRTGEE-VFELLAKMRKMGCEPTV 400
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
ETY L++ CR + + L M + V D +Y ++ GL +GK+E A +++E
Sbjct: 401 ETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGKIEEAYGYYKE 460
Query: 502 MISKGIVPYHSTYKMLE-----EKLEKKRLGNAKERINK--LLAHAKEQKTF 546
M KG+ P + M++ ++ ++R+ ++K +NK ++ ++ +K F
Sbjct: 461 MKDKGMRPNENVEDMIQSWFSGKQYAEQRITDSKGEVNKGAIVKKSEREKNF 512
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 209/426 (49%), Gaps = 5/426 (1%)
Query: 110 SPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVD 169
+P + + L + + LV L+R ND A FF Y H P Y+ +D
Sbjct: 50 NPQALAQTLHSPTIQWTPQLVNTILKRLWNDGPKALQFFNLLSHHPSYSHHPSSYDHAID 109
Query: 170 VLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
+ + + + LV M G T + I R G+ AV+ F M ++G
Sbjct: 110 ISARLRDSPSLRSLVYRMRSARLGPTP-KTFAIIAERYASAGKPHRAVKVFLSMHQFGCF 168
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+D ++ + ++D L K VE AY +F FK +N++++GWC ++ + A + +
Sbjct: 169 QDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNGWCLIKRTNKALEML 228
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
KEM ++G +P++ SY ++ Y R + D EM+++ C+ VITYT V+H G A
Sbjct: 229 KEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDCEIDVITYTTVIHGFGVA 288
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+I A KV++ M LP + Y++ I +L K V +A IFE+M +G VPN +TY
Sbjct: 289 GEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIVIFEEMVVKGYVPNSITY 348
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N +I C R E E A++ + +M++D C+P+ +TY +++ C + + L M
Sbjct: 349 NLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFCDEGEIDKALDLFQKMTS 408
Query: 470 NDVSMDAGTYASLVRGLI---ESGKLELACSFFEEMISKGIVPYHSTY-KMLEEKLEKKR 525
D + TY L+ + +S L +A + EM+ +G VP T+ ++L L
Sbjct: 409 GDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEMVDRGFVPRKFTFNRVLNGLLLTGN 468
Query: 526 LGNAKE 531
G AKE
Sbjct: 469 QGFAKE 474
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 136/273 (49%), Gaps = 9/273 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN MV+ K+ E++KEM + G +L + +T+++ R G+ ++A + F
Sbjct: 208 YNVMVNGWCLIKRTNKALEMLKEM--VKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLE 265
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
MKK E D + ++ ++ A KVF + K +P S +N I CK
Sbjct: 266 MKKRDCEIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLP-SVATYNAFIQVLCKKD 324
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
VD+A +EM +G+ P+ ++Y I C + + + + M++ GC+P+V TY
Sbjct: 325 NVDNAIVIFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYN 384
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI---FILSKAGRVKDANEIFEDM 397
+V+ +I++AL +++KM S DCLP+ Y+ LI F+ K+ + A + +M
Sbjct: 385 LVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNLLIEM 444
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
+G VP T+N +++ + A ++L+
Sbjct: 445 VDRGFVPRKFTFNRVLNGLLLTGNQGFAKEILR 477
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/422 (29%), Positives = 219/422 (51%), Gaps = 2/422 (0%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V++IS+I+S + +L +S LVEQ L+R ++ A FF WAK+ G
Sbjct: 43 VNEISRIVSDHRHPRHDLELSLTPFSTQISTDLVEQVLKRCNHLGFSAHRFFLWAKSIPG 102
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDD 215
+ H+ + ++ +V++LG+SK+F ++W+ + E E ++ ++ I R D
Sbjct: 103 FQHSVQSFHILVEILGRSKQFAILWDFLIETRESDSSCKITNEIFWIIFTAYSRADLPDG 162
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
A+ +F M ++G++ + +L+ TL K V A + F + K L+++ ++ILI+G
Sbjct: 163 AIRSFVRMDEFGIKPSIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLTTKTYSILING 222
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
W K A++ M +QG D+++Y +E C+ + D L +M K +P
Sbjct: 223 WGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLNDMLSKKVEPD 282
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
TY+I + + A ++ A V +KM+ + LP+ Y+ +I L K +V++A ++ +
Sbjct: 283 AFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIKKVEEAYQLLD 342
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M G+ P+ +YN + + C E ALKL+ +ME+D+C PD TY +LK+ R
Sbjct: 343 EMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYNMVLKLLIRIG 402
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFFEEMISKGIVPYHSTY 514
R + M TY+ ++ GL + GKLE AC +F MI +GI PY +T
Sbjct: 403 RFDKATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEACKYFAMMIDEGIPPYDTTI 462
Query: 515 KM 516
+M
Sbjct: 463 EM 464
>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Brachypodium distachyon]
Length = 522
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/459 (29%), Positives = 221/459 (48%), Gaps = 22/459 (4%)
Query: 97 VDKISKIL---SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
D+++++L + + ++ L G GVS+S SL+ Q L R A A+
Sbjct: 43 ADELARLLLSHHNPFHPAESTLQLLSGGGVSLSQSLLVQILLRLRGASKLALSLLNSARL 102
Query: 154 QTGYMH----TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
+ Y+ +VD LG++ +F W LV E +G + T + + RR V
Sbjct: 103 HPSPSVSSPPNADAYDAVVDALGRAHQFDAAWRLVVEAAA--DGAATSRTFAVLARRYVA 160
Query: 210 GGRYDDAVEAFRGMKKY-GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
G AV AF M+ + G E D + L+DTL K + A +VF + K + ++
Sbjct: 161 AGMTRQAVRAFDDMEAFVGREPDAGEFTTLLDTLCKYKYPKVATEVFNKRKYKYEPNEKM 220
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR----------EKDFR 318
+ ILI+GWCK + D +QK +K+M G P+VV+Y + CR ++ R
Sbjct: 221 YTILIYGWCKVNRNDMSQKFLKDMIDHGIEPNVVTYNILLNGVCRHASLHPDNRFDRTVR 280
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+D LKEM+++G +P V +Y+IV+H +A + L ++ MK P + Y+S+I
Sbjct: 281 AAEDLLKEMRDRGIEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVI 340
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL-- 436
L+ GR++DA + +M +GV P+ TYN R + AL+L +KM+
Sbjct: 341 KCLASCGRLEDAERLLHEMASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASP 400
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD +Y LL M + + + L M ++ V D +Y L+ G E+ K AC
Sbjct: 401 TAPDIHSYHILLGMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREAC 460
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
FF EMI KG +P T+++L L + + R+ K
Sbjct: 461 QFFMEMIEKGFLPQKITFEILYRGLIQADMLRTWRRLKK 499
>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 211 bits (538), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 128/419 (30%), Positives = 201/419 (47%), Gaps = 5/419 (1%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V + ++LS + AL G ++ + LRR N P+ FF +A G
Sbjct: 50 VGALCRVLSDFRGPRHDLRAALDGFAPRLTPAAAADVLRRCRNLPVPSLRFFLFAAALPG 109
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ H PE + L ++ F L+ L + +L +S + R R G DDA
Sbjct: 110 FTHLPESLLILAGSLAGARLFPLLRSL---LSDLPRPALSRDLFPLLFRAYARAGLPDDA 166
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
+ AF M+++G L L+ TL VEHA F E +S++ + ILI GW
Sbjct: 167 IRAFSSMERFGFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPIQFDVSAKTYTILISGW 226
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE-KGCKPS 335
K + AQK EM ++G PDV +Y I+ CR D + LK+MQ +G P
Sbjct: 227 AVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLKDMQRSRGLAPD 286
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
TY + + +K AL+V ++M++ P+ Y+++I +L + G V +A I
Sbjct: 287 AATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDEAYNILN 346
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M G P+V +YNT++++ C E AL+L+ +M+E LC P+ +Y +LKM
Sbjct: 347 EMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGLCLPNRHSYNMILKMLIAIG 406
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGL-IESGKLELACSFFEEMISKGIVPYHST 513
R+ + M K A TYA ++ GL + G+ E ACS+F M+ GI PY +T
Sbjct: 407 RVDRAIEVWDGMEKRGFHPGAATYAVMIHGLSCKKGRAEEACSYFLRMVDDGIPPYQAT 465
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 210 bits (534), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 218/426 (51%), Gaps = 1/426 (0%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V++IS++LS + +L +S +LV+Q L+R +N A FF WAK+ G
Sbjct: 47 VNEISRLLSDHRYPHHDLELSLNPFSAQISTNLVDQVLKRCNNLGFSAHRFFLWAKSIPG 106
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ H+ ++ +V++LG K+F ++W+ + EM + ++ I R + D A
Sbjct: 107 FQHSVMSFHILVEILGSCKQFAILWDFLIEMRGSCHYEINSEIFWLIFRAYSQANLPDGA 166
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
+ +F M ++G++ L+ L K V+ A + F + K+ L+++ ++ILI GW
Sbjct: 167 IRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRFLLTAKTYSILISGW 226
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ A + + M +QG D+++Y ++ C+ + +M K +P
Sbjct: 227 GDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEPDA 286
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TY+I +H+ A + AL+V +KM+ + LP+ Y+ +I L K V++A + ++
Sbjct: 287 FTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLLDE 346
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M +GV P+ +YN + + C E A++L+ +ME+D C PD TY +LK+ R R
Sbjct: 347 MISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNMVLKLLIRIGR 406
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFFEEMISKGIVPYHSTYK 515
+ + +M TY+ ++ G + GKLE AC +FE MI +GI PY +T +
Sbjct: 407 FDKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEACKYFEMMIDEGIPPYVTTVE 466
Query: 516 MLEEKL 521
ML +L
Sbjct: 467 MLRNQL 472
>gi|356499705|ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 500
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 252/493 (51%), Gaps = 32/493 (6%)
Query: 52 IKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSP 111
++ F QSP +++ PS + I R+LS N DV K+ ILS +P
Sbjct: 3 LRRFSFQSP-SNYIPPS-------------TLIRHRLLSSNQNDDVQKVFGILSST-STP 47
Query: 112 DKVVEALKGCGVSVSNSLVEQTLRR--FSN-DLTPAFGFFTWAKTQTGYMHTPEMYNTMV 168
+++ ++LK GV +SN +++Q L+R FS+ + + FF + + G+ H+ +TM+
Sbjct: 48 EQLKQSLKSSGVFLSNDVIDQVLKRVRFSHGNPSQTLEFFRYTGRRKGFYHSSFSLDTML 107
Query: 169 DVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV 228
+LG+S+ F +WEL+ E + ++ T+ ++ R+ + VE+FR +K
Sbjct: 108 YILGRSRMFGQVWELLIEARRKDQTAITARTVMVVLGRIAKVCSVRQTVESFRKFRKLVQ 167
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
E DT + L+ TL + S+ A V+ K + Q FNIL+ GW + +DA
Sbjct: 168 EFDTNCFNALLRTLCQEKSMADARNVYHSLKHRFRPNLQTFNILLSGW---KTPEDADLF 224
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
KEM + G +PDVV+Y ++ YC+ ++ K L EM+++ P VITYT ++ LG
Sbjct: 225 FKEMKEMGVTPDVVTYNSLMDVYCKGREIEKAYKMLDEMRDQDFSPDVITYTCIIGGLGL 284
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
Q ++A V ++MK C PD + Y++ I A R+ DA+ + E+M +G+ PN T
Sbjct: 285 IGQPDKARNVLKEMKEYGCYPDAAAYNAAIRNFCIAKRLGDAHGLVEEMVTKGLSPNATT 344
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YN ++ +++ + Q+M + C P+ ++ L+++ R ++++ + +
Sbjct: 345 YNLFFRVFYWSNDLQSSWNMYQRMMVEGCLPNTQSCMFLIRLFRRHEKVE----MALQFW 400
Query: 469 KNDVSMDAGTYA----SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ V G+Y L L + GKLE A F EM+ KG P H +++ ++ +E
Sbjct: 401 GDMVEKGFGSYTLVSDVLFDLLCDMGKLEEAEKCFLEMVEKGQKPSHVSFRRIKVLME-- 458
Query: 525 RLGNAKERINKLL 537
L N E + L+
Sbjct: 459 -LANRHEALQSLM 470
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 196/405 (48%), Gaps = 7/405 (1%)
Query: 125 VSNSLVEQTLR-----RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCL 179
VS SLV + R A FF WA ++ G+ H PE YN M+D+ GK + F L
Sbjct: 101 VSPSLVSHVIEKCAAVRHGIPFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDL 160
Query: 180 MWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
W+++ M + N +S+ T S ++RR VR G +AV AF M+ Y + D A S+L+
Sbjct: 161 GWQVIDLM-KARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILI 219
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L + A F KD ++ L+ GWC+ + +A++ EM G P
Sbjct: 220 SILCRKRRATEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMP 279
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+V +YT I+ CR + D EM + GC+P+ IT+ ++ KA + + L+VY
Sbjct: 280 NVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVY 339
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+MK C PDT Y+ LI K G + +A ++ M K+G PN T+N + S
Sbjct: 340 NQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKL 399
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ A +L KM+E CK + TY L++M K ++ L M ++DV + TY
Sbjct: 400 RDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTY 459
Query: 480 ASLVRGLIESGKLELACSFFEEMI-SKGIVPYHSTYKMLEEKLEK 523
L+ G A FF EM+ K + P Y+ + ++L K
Sbjct: 460 CVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRK 504
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 123/276 (44%), Gaps = 4/276 (1%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N +I K R D + + M + + +++ I Y R + M+
Sbjct: 145 YNEMIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRME 204
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+ CKP I ++I++ L + ++ EA ++ +K D PD Y++L+ +AG +
Sbjct: 205 DYNCKPDKIAFSILISILCRKRRATEAQSFFDSLK-DKFEPDVIVYTNLVRGWCRAGNIP 263
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A +F +MK G +PNV TY +I + C + A + +M + C+P+ T+ LL
Sbjct: 264 EAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLL 323
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
++ + R + + + M + D TY L+ + G L+ A M+ KG
Sbjct: 324 RVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCS 383
Query: 509 PYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
P ST+ L + K R N R L A KE K
Sbjct: 384 PNASTFNGLFGSIAKLRDVNGAHR---LYAKMKELK 416
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/235 (23%), Positives = 94/235 (40%), Gaps = 38/235 (16%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G M Y ++D L + + ++ EM ++ S+ T + ++R V+ GR +
Sbjct: 275 AGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSI-TFNNLLRVHVKAGRTE 333
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQI---- 268
++ + MK+ G DT + L+++ K +++ A KV K C P +S
Sbjct: 334 KVLQVYNQMKRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLF 393
Query: 269 ------------------------------FNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
+NIL+ + T+ D K KEM +
Sbjct: 394 GSIAKLRDVNGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVE 453
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC-KPSVITYTIVMHALGKAKQI 352
P+V +Y I YC + +EM E+ C KPS+ Y V+ L KA Q+
Sbjct: 454 PNVNTYCVLIAMYCGMGHWNNAYKFFREMVEEKCLKPSLPVYEKVLQQLRKAGQL 508
>gi|122236160|sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g13420, mitochondrial; Flags: Precursor
gi|110738270|dbj|BAF01064.1| hypothetical protein [Arabidopsis thaliana]
Length = 509
Score = 207 bits (528), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 224/439 (51%), Gaps = 17/439 (3%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
+D + IS++L + + +L+ G+S++ +L+ QTL R ++ A FF + ++
Sbjct: 39 SDAELISQMLITNHNPFHFMESSLQLNGISLTPNLIHQTLLRLRHNSKIALSFFQYLRSL 98
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
TP +N ++D+LG+ ++F ++ +L+ EMD+ S T +++RL+ G
Sbjct: 99 PSPSTTPTSFNLIIDILGRVRQFDVVRQLIVEMDQ-----TSPETFLILVKRLIAAGLTR 153
Query: 215 DAVEAFRGMKKYGVEKDTRAL--SVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNIL 272
AV AF + + R + L+DTL K + A VF E K+ +++ IL
Sbjct: 154 QAVRAFDDAPCFLENRRFRLVEFGFLLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTIL 213
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR----------EKDFRKVDD 322
I GWCK R++D A+K + EM + G P+VV+Y + CR E++ R +
Sbjct: 214 IAGWCKLRRIDMAEKFLVEMIESGIEPNVVTYNVLLNGICRTASLHPEERFERNVRNAEK 273
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
EM+++G +P V +++IV+H +A + L + MK+ P Y+S++ L
Sbjct: 274 VFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLC 333
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
GR+++A E+ E M + G+ P+ TYN R + A+ L +KM+ LCKP +
Sbjct: 334 SCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQ 393
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY LL +M+ + + + ++ D +Y SLV GL K + AC +F EM
Sbjct: 394 TYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEM 453
Query: 503 ISKGIVPYHSTYKMLEEKL 521
I +G +P T++ L + L
Sbjct: 454 IERGFLPQKLTFETLYKGL 472
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 113/225 (50%), Gaps = 7/225 (3%)
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY-KVFLEFKDCIPLSSQIFNILI 273
+A + F M++ G+E D + S+++ + + E K+ L I + + + ++
Sbjct: 270 NAEKVFDEMRQRGIEPDVTSFSIVLHMYSRAHKAELTLDKMKLMKAKGISPTIETYTSVV 329
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
C ++++A++ ++ M + G SP +Y CF + Y KD + ++M+ CK
Sbjct: 330 KCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCK 389
Query: 334 PSVITYTIVMHA---LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
PS TY +++ LGK + + E +++ +K+ + PD Y+SL+ L + K+A
Sbjct: 390 PSTQTYNVLLGTFINLGKMETVKE---IWDDLKASETGPDLDSYTSLVHGLCSKEKWKEA 446
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
F +M ++G +P LT+ T+ ++ +L +K++E+
Sbjct: 447 CGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKLDEE 491
>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
Length = 526
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 133/458 (29%), Positives = 225/458 (49%), Gaps = 21/458 (4%)
Query: 97 VDKISKIL---SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
D+++++L + + ++ L G GVS+S L+ Q L R A A+
Sbjct: 48 ADELARLLLAHHNPFHPAESPLQLLSGGGVSLSGDLLVQILLRLRGASKLALSLLHAARL 107
Query: 154 QTGYMHT---PEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
+++T + Y+ +VD LG++++F W +V +D +G S T + + RR V
Sbjct: 108 HPSFVNTQPRSDAYDAVVDALGRARQFDAAWRVV--VDASADGAASPRTFAVLARRYVAA 165
Query: 211 GRYDDAVEAFRGMKKY-GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF 269
G A+ AF M+ + E D + L+DTL K + A +VF + K + +++
Sbjct: 166 GMTRQAIRAFDDMEAFVSREPDAAEFATLLDTLCKYKYPKVATEVFNKRKYKYGPNEKMY 225
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE----KDFR------K 319
+ILI+GWCK + D A+K +K+M G P++V+Y + CR D+R
Sbjct: 226 SILIYGWCKVNRSDMAKKFLKDMLVHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVHA 285
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+D LKEM+ +G +P V +Y+I++H +A + L ++ MK P + Y+S+I
Sbjct: 286 AEDLLKEMRGRGIEPDVTSYSIILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIK 345
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE--DLC 437
LS GR++D + ++M +GV P+ TYN + R + AL+L KM+ L
Sbjct: 346 CLSSCGRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLT 405
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD TY LL M + R + + + M ++ V D +Y L+ +S K AC
Sbjct: 406 APDIHTYNILLGMFSKLNRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQ 465
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
FF EMI KG +P T++ L L + + R+ +
Sbjct: 466 FFMEMIEKGFLPQKITFETLYRGLIQADMLRTWRRLKR 503
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/435 (28%), Positives = 218/435 (50%), Gaps = 4/435 (0%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
+V+++ K++ + + + L CGV +S+ LV L+RF + PAF FF WA +
Sbjct: 172 VEVERVCKVIDELFALDRNMEVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCWAGKR 231
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G+ H YN M+ VLG++++F M +++EM E G +++ T S ++ +
Sbjct: 232 PGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMGE--KGLLTMETFSIAIKAFAEAKQRK 289
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
AV F MKKYG + ++ L+D+L + A VF + KD S Q + IL+
Sbjct: 290 KAVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLS 349
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
GWC+ + + +A + EM +GF+PDVV++ +E + K + M+ KG P
Sbjct: 350 GWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSP 409
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V +YTI++ K K + EA++ ++ M C PD + Y+ LI + ++ +
Sbjct: 410 NVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLL 469
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M+++G P+ TYN +I ++ ++A+++ +KM + KP TY ++K
Sbjct: 470 KEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVT 529
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
K ++ + + M + D +Y + GLI + AC + EEM+ KG+ Y
Sbjct: 530 KNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKAPKLDY 589
Query: 515 KMLEEKLEKKRLGNA 529
+ K GNA
Sbjct: 590 NKFASDISKT--GNA 602
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 123/270 (45%), Gaps = 2/270 (0%)
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
S+ +N ++ +TR+ + ++EM ++G + +++ I+ + K +K
Sbjct: 238 SRTYNFMMCVLGRTRQFETMVAMLEEMGEKGLL-TMETFSIAIKAFAEAKQRKKAVGIFD 296
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
M++ G K V ++ +L AK EA V+EK+K D P Y+ L+ +
Sbjct: 297 LMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLK-DRFTPSLQTYTILLSGWCRLK 355
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ +A ++ +M +G P+V+ +N M+ ++ +A+KL + M+ P+ +Y
Sbjct: 356 NLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYT 415
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
+++ C++K M M DA Y L+ G K+++ S +EM +
Sbjct: 416 IMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRER 475
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
G P TY L + + + + + RI K
Sbjct: 476 GCPPDGRTYNALIKLMTSQHMPDDAVRIYK 505
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 89/217 (41%), Gaps = 4/217 (1%)
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILI 273
+A+E F M G + D + L+ + ++ Y + E ++ P + +N LI
Sbjct: 429 EAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRERGCPPDGRTYNALI 488
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
DDA + K+M Q G P + +Y ++ Y K++ + EM +KGC
Sbjct: 489 KLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVTKNYEMGHEIWDEMHQKGCC 548
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P +Y + + L + + EA K E+M Y+ +SK G E+
Sbjct: 549 PDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKAPKLDYNKFASDISKTGNAVILEEL 608
Query: 394 FEDMKKQGV--VPNVL-TYNTMISSACARSEEENALK 427
M G V NVL ++ M+ + R E + +
Sbjct: 609 ARKMNFVGKFEVSNVLASWADMMKKSAKRREPTTSAR 645
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 206 bits (525), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 129/440 (29%), Positives = 221/440 (50%), Gaps = 7/440 (1%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
DV I K+L ++ L+ C V SN LV + L + ND AF FF WA Q
Sbjct: 45 DVGTIVKLLKNCGSDRKELRNKLEECDVKPSNELVVEILSQVRNDWETAFTFFVWAGKQQ 104
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY+ + Y++M+ +LGK +KF W L+ EM + + V+ T+ ++R+
Sbjct: 105 GYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGK 164
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
A+ F K++ +E L+ L + +V A + KD P ++ FNI+++G
Sbjct: 165 AINTFHAYKRFKLEMGIDDFQSLLSALCRYKNVSDAEHLIFCNKDTYPFDAKSFNIVLNG 224
Query: 276 WCKT-RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
WC +A++ EM G DVVSY+ I Y + KV M+++ +P
Sbjct: 225 WCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEP 284
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCL-PDTSFYSSLIFILSKAGRVKDANEI 393
Y V+HAL KA ++EA + + M+ + + P+ Y+SLI L KA + ++A ++
Sbjct: 285 DRKVYNAVIHALAKASFVSEARNLMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQV 344
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
F++M ++G+ P + TY+ + R+ EE +LL KM + C+P +TY L++ CR
Sbjct: 345 FDEMLEKGLFPTIRTYHAFMR--ILRTGEE-VFELLAKMRKMGCQPTVDTYIMLIRKLCR 401
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+ + L M + V D +Y ++ GL +GK+E A +++EM KG+ P +
Sbjct: 402 WRDFDNVLLLWNEMKEKGVGPDLSSYIVMIHGLFLNGKIEEAYGYYKEMKEKGMRPNENV 461
Query: 514 YKMLEEKLEKKRLGNAKERI 533
M++ K+ A++R+
Sbjct: 462 EDMIQSWFSGKQY--AEQRV 479
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 127/448 (28%), Positives = 222/448 (49%), Gaps = 11/448 (2%)
Query: 86 SRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAF 145
+ +L + + + I +ILS +SP V +L+ V VS LV L + SN A
Sbjct: 47 TSLLHKPNNPHAETICRILSTTPESPVDV--SLRNFPVEVSPELVVAVLNKLSNAGILAL 104
Query: 146 GFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE--LNNGYVSLATMSTI 203
FF WA+ Q G+ H E+++ +++ LGK ++F ++W LV EM + L NG T S I
Sbjct: 105 SFFRWAEKQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQRKLLNG----DTFSLI 160
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN-SVEHAYKVFLEFKDC- 261
RR VR +A++ F M+KYG++ + L+D L K VE A ++F + +
Sbjct: 161 ARRYVRAKVIKEALKTFERMEKYGLKPQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWN 220
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ + + + ILI GW + + + + +EM GF PDVV+Y I YC+ K + +
Sbjct: 221 LEPNLKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAI 280
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+M K PS Y + LG +++EA + +EK K+ P+ Y++++
Sbjct: 281 GIYHDMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAY 340
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME-EDLCKPD 440
+ R+ DA I +MK+ G+ PN TY+ ++ + A + Q+M E C+P
Sbjct: 341 CWSMRIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPS 400
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TYA +++M C + ++ + + M + +++L+ L KL+ AC +F+
Sbjct: 401 VSTYAIMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQ 460
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGN 528
+M+ GI P + + + L + N
Sbjct: 461 QMLDVGIRPTANMFSAFKRALMAAGMEN 488
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 124/274 (45%), Gaps = 5/274 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +++ + + + E+ +EM + +G+ + T I+ + +YD+A+ +
Sbjct: 228 YTILIEGWSQQQNLLKVDEVCREMKD--DGFQPDVVTYGIIINAYCKAKKYDEAIGIYHD 285
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRK 281
M V + L G+ ++ A++ F + K P + +N ++ +C + +
Sbjct: 286 MLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMR 345
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ-EKGCKPSVITYT 340
+DDA + + EM + G P+ +Y + H + ++ + M E GC+PSV TY
Sbjct: 346 IDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYA 405
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I++ Q++ A+ V+ +MK LP +S+LI L ++ DA F+ M
Sbjct: 406 IMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDV 465
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
G+ P ++ + A E + +K+++
Sbjct: 466 GIRPTANMFSAFKRALMAAGMENTVIHFAKKVDK 499
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 199/411 (48%), Gaps = 4/411 (0%)
Query: 114 VVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGK 173
+ E+L + + LV L+R N A FF Y H ++ +D+ +
Sbjct: 45 LAESLHSPSIQWTPQLVNTILKRLWNHGPKALHFFKILSHHPSYCHQASSFDHAIDICAR 104
Query: 174 SKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR 233
+ F +W LV M G S T + I R G+ AV F M +YG +D
Sbjct: 105 LRDFRTLWFLVSRMRSCRLG-PSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLS 163
Query: 234 ALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
+ + ++D L K VE AY +F K +NI+++GWC ++ A + +KEM
Sbjct: 164 SFNTILDVLCKSKRVEMAYNLFKALKGKFKADCVSYNIIVNGWCLIKRTPKALEMLKEMV 223
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
++G +P++ +Y + Y R + EM+++ C V+TYT V+H LG +I
Sbjct: 224 ERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIK 283
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
A V+ +M D LP + +++LI IL K V++A IFE+M K+G VPN +TYN +I
Sbjct: 284 RARNVFNQMVKDGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVI 343
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C E + A++L+++ME+D C+P+ +TY L++ C ++ L M D
Sbjct: 344 RGLCHVGEMQRAMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCL 403
Query: 474 MDAGTYASLVRGLI---ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ TY L+ + S L +A EM+ +G +P T+ + + L
Sbjct: 404 PNLDTYNILINSMFVRKNSDNLLVAGKLLVEMVDRGFLPRKLTFNRVLDGL 454
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 107/222 (48%), Gaps = 1/222 (0%)
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
S+ I+ R +DFR + + M+ PS T+ I+ + + A+ V+ M
Sbjct: 94 SFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRTFAIIAERYAAMGKPHRAVTVFMSM 153
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
C D S +++++ +L K+ RV+ A +F+ +K + + ++YN +++ C
Sbjct: 154 HEYGCFQDLSSFNTILDVLCKSKRVEMAYNLFKALKGK-FKADCVSYNIIVNGWCLIKRT 212
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
AL++L++M E P+ TY +L R + M K +D TY S+
Sbjct: 213 PKALEMLKEMVERGLTPNLTTYNIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSV 272
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ GL G+++ A + F +M+ G++P +T+ L + L KK
Sbjct: 273 IHGLGVVGEIKRARNVFNQMVKDGVLPSVATFNALIQILCKK 314
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 206 bits (524), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 121/370 (32%), Positives = 193/370 (52%), Gaps = 11/370 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +VD L K K WE+++EM L+ G V +L T ++++ L R R DA+ R
Sbjct: 229 YTILVDGLCKESKVAAAWEVLREM--LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRD 286
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTR 280
M G + L+D L K V+ A + + D P I+N+LI+G CK
Sbjct: 287 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTP-DLMIYNMLINGLCKAD 345
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+VD++ ++ G PDVV+Y+ I CR + L ++ +GC P VI Y+
Sbjct: 346 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 405
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L KA +++EA +YE M D C D YS+LI L KAGRV +A+ + M +
Sbjct: 406 TLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 465
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+ +TYN++I C + + A++L+++ME C P TY L+ CR +R+
Sbjct: 466 GTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA 525
Query: 461 NFLLTH-----MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
LL + ++D Y+SL+ GL ++G++ A +F+EMI G++P H TY
Sbjct: 526 VVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYS 585
Query: 516 MLEEKLEKKR 525
+L E L+K +
Sbjct: 586 ILLEGLKKSK 595
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/368 (29%), Positives = 184/368 (50%), Gaps = 11/368 (2%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEM------DELNNGYVSLATMSTIMRRLVRGG 211
+P M YNT++D L ++ K L +EM D + ++ T S ++ L +
Sbjct: 146 SPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKAN 205
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIF 269
R AVE MK G D ++L+D L K + V A++V E D C+P + +
Sbjct: 206 RVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP-NLVTY 264
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N L+HG C+ R+V DA M++M +G +P+VV+Y I+ C+ + L +M +
Sbjct: 265 NSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMID 324
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
KG P ++ Y ++++ L KA Q++E++ + + S PD YSS+I+ L ++ R+ +
Sbjct: 325 KGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDE 384
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A + +K +G P+V+ Y+T+I C + + A L + M D C D TY+ L+
Sbjct: 385 ACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLID 444
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ R+ + LL M + TY SL++GL + L+ A EEM P
Sbjct: 445 GLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAP 504
Query: 510 YHSTYKML 517
TY +L
Sbjct: 505 SAVTYNIL 512
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 187/382 (48%), Gaps = 11/382 (2%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A +G + +Y ++ L K K+ ++ EM + + ++ T ++++ L +
Sbjct: 69 AMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRD-HGCEPNVVTYNSLIDGLCKN 127
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---------C 261
D A E F MK + L+D L + +E A +F E D C
Sbjct: 128 NEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRC 187
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
P + +++LI G CK +V A + ++ M +G SPDV++YT ++ C+E
Sbjct: 188 SP-NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ L+EM + GC P+++TY ++H L +A+++++AL + M C P+ Y +LI L
Sbjct: 247 EVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGL 306
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K GRVKDA + DM +G P+++ YN +I+ C + + ++ LL++ KPD
Sbjct: 307 CKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDV 366
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY+ ++ CR R+ LL ++ D Y++L+ GL ++GK++ A +E
Sbjct: 367 VTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEV 426
Query: 502 MISKGIVPYHSTYKMLEEKLEK 523
M G TY L + L K
Sbjct: 427 MAGDGCDADVVTYSTLIDGLCK 448
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 162/333 (48%), Gaps = 8/333 (2%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++R RGG D A F M+ + + S+L+D L K A + F
Sbjct: 11 TYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAM 70
Query: 259 KDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ I + I+ L+ G K +++D A + EM G P+VV+Y I+ C+ +
Sbjct: 71 QGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEP 130
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM-------KSDDCLPD 370
+ + + M+ C PS++TY ++ L + ++ A+ ++++M D C P+
Sbjct: 131 DRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPN 190
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
YS LI L KA RV A E+ E MK +G P+V+TY ++ C S+ A ++L+
Sbjct: 191 VITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLR 250
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
+M + C P+ TY LL CR +R+ L+ M + + TY +L+ GL + G
Sbjct: 251 EMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVG 310
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+++ AC+ +MI KG P Y ML L K
Sbjct: 311 RVKDACAMLADMIDKGGTPDLMIYNMLINGLCK 343
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 159/323 (49%), Gaps = 10/323 (3%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
S ++ L + R DA+ FR M+ G+ DT + L+ L K ++ A + E +D
Sbjct: 48 SILIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRD 107
Query: 261 --CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
C P + +N LI G CK + D AQ+ + M SP +V+Y ++ R
Sbjct: 108 HGCEP-NVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLE 166
Query: 319 KVDDTLKEMQEK-------GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
+ +EM ++ C P+VITY++++ L KA ++++A+++ E MK+ C PD
Sbjct: 167 RAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDV 226
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y+ L+ L K +V A E+ +M G VPN++TYN+++ C +AL L++
Sbjct: 227 ITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRD 286
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M C P+ TY L+ C+ R+K +L M + D Y L+ GL ++ +
Sbjct: 287 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 346
Query: 492 LELACSFFEEMISKGIVPYHSTY 514
++ + + +S GI P TY
Sbjct: 347 VDESIALLRRAVSGGIKPDVVTY 369
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 126/266 (47%), Gaps = 11/266 (4%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD--TLKE 326
+ L+ G+C+ ++D AQ+ EM + P+V + I+ C+ K R +D +
Sbjct: 12 YAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAK--RSIDALRCFRA 69
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
MQ G + YT ++ L K K++++AL + +M+ C P+ Y+SLI L K
Sbjct: 70 MQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNE 129
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM-------EEDLCKP 439
A E+FE MK P+++TYNT++ + E A+ L Q+M +D C P
Sbjct: 130 PDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSP 189
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
+ TY+ L+ C+ R+ LL M S D TY LV GL + K+ A
Sbjct: 190 NVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVL 249
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKKR 525
EM+ G VP TY L L + R
Sbjct: 250 REMLDAGCVPNLVTYNSLLHGLCRAR 275
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 124/247 (50%), Gaps = 8/247 (3%)
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PDV +Y + +CR + + EM+ K P+V +I++ L KAK+ +AL+
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+ M+ + DT Y++L+ L K R+ A I +M+ G PNV+TYN++I C
Sbjct: 67 FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR----KKRMKVLNFLL---THMFKND 471
+E + A +L + M+ C P TY LL R ++ M + +L +H +
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAK 530
S + TY+ L+ GL ++ ++ A E M ++G P TY +L + L K+ ++ A
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246
Query: 531 ERINKLL 537
E + ++L
Sbjct: 247 EVLREML 253
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 104/217 (47%), Gaps = 8/217 (3%)
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C+P V TY ++ + +I++A + +++M+S + +P+ S LI L KA R DA
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
F M+ G+V + + Y ++S + AL +L +M + C+P+ TY L+
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK------ 505
C+ L HM + S TY +L+ GL +GKLE A + F+EM+ +
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMD 184
Query: 506 -GIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHA 540
P TY +L + L K R+ A E + + A
Sbjct: 185 DRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARG 221
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 109/224 (48%), Gaps = 10/224 (4%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
SN L A + K++ G +Y+T++D L K+ K ++L + M + +
Sbjct: 379 SNRLDEACRLLLYVKSR-GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAG-DGCDADV 436
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
T ST++ L + GR D+A M + G T + L+ L N ++ A ++
Sbjct: 437 VTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEE 496
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDA-----QKAMKEMFQQGFSPDVVSYTCFIEH 310
+E +C P S+ +NILIHG C+ +VD A Q + + G + D ++Y+ I+
Sbjct: 497 MERSNCAP-SAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDG 555
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
C+ + D +EM + G P ITY+I++ L K+K ++E
Sbjct: 556 LCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHE 599
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 118/279 (42%), Gaps = 51/279 (18%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDD 215
TP++ YN +++ L K+ + + E + + +G + + T S+++ L R R D+
Sbjct: 328 TPDLMIYNMLINGLCKADQ---VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDE 384
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIH 274
A +K G D S L+D L K V+ A+ ++ + D ++ LI
Sbjct: 385 ACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLID 444
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G CK +VD+A + M + G P ++Y I+ C + + ++EM+ C P
Sbjct: 445 GLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAP 504
Query: 335 SVITYTIVMHA----------------------------------------LGKAKQINE 354
S +TY I++H L KA ++ E
Sbjct: 505 SAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAE 564
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
AL +++M + +PD YS L+ L K+ KD +E+
Sbjct: 565 ALDYFQEMIDNGVIPDHITYSILLEGLKKS---KDLHEL 600
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/421 (29%), Positives = 200/421 (47%), Gaps = 8/421 (1%)
Query: 124 SVSNSLVEQTLR-----RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFC 178
SVS ++V + R PA FF WA G+ H+P+ YN M+D+ GK K+F
Sbjct: 106 SVSPAVVRYVIEKSGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFG 165
Query: 179 LMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVL 238
L W L+ M + N +++ T S ++RR VR G +AV AF M+ YG D A S +
Sbjct: 166 LAWYLIDLM-KARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNV 224
Query: 239 MDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
+ L K A F K ++ L+HGWC+ + +A+ +EM G S
Sbjct: 225 ISILCKKRRAVEAQSFFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGIS 284
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P+V +Y+ I+ CR + D EM + GC P+ +T+ ++ +A + + L+V
Sbjct: 285 PNVYTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQV 344
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
Y +MK C D Y+ LI K + +A ++ M K PN ++N +
Sbjct: 345 YNQMKRLRCAADLITYNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAK 404
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ A ++ +M+E CKP+ TY L++M K ++ L M + +V + T
Sbjct: 405 SQDVNGAHRMFARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNT 464
Query: 479 YASLVRGLIESGKLELACSFFEEMIS-KGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
Y L+ G A FF EMI K I P YKM+ E+L K +L +E ++K+
Sbjct: 465 YRELIALYCGMGHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKM 524
Query: 537 L 537
+
Sbjct: 525 V 525
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 206 bits (523), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 130/443 (29%), Positives = 224/443 (50%), Gaps = 9/443 (2%)
Query: 100 ISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMH 159
+ +I+S Q + K+ L GV+VS LV + L+ SN A FF WA+ Q G+ +
Sbjct: 102 VCRIVSTQPEP--KIASTLDALGVAVSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSY 159
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
T E ++ +++ LGK K+F L+W LV+ M G +S T I+RR R + +AVE
Sbjct: 160 TAEGFHNLIEALGKIKQFRLVWSLVETMR--CRGLLSKDTFKLIVRRYARARKVKEAVET 217
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK---DCIPLSSQIFNILIHGW 276
F M +G++ + + L+DTL K V+ A ++ E K +P + + +L+ GW
Sbjct: 218 FEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVP-DLKTYTVLMEGW 276
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ + + +EM G PDVV+Y I +C+ + EM+ GC PS
Sbjct: 277 GHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSP 336
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
Y ++++ LG ++++EALK +E K + ++++ +A + + A ++ ++
Sbjct: 337 HVYCMLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAYCRASKFQHAFKMVDE 396
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M+K V PN TY+ ++ + E A + Q+M D C+P TY ++ M C R
Sbjct: 397 MRKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQLNTYTMMVGMFCSNGR 456
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ + + M + V +++L+ GL +LE AC +F+EM+ KGI P +
Sbjct: 457 VDMALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSN 516
Query: 517 LEEKL-EKKRLGNAKERINKLLA 538
L+E L + R+ A+E KL A
Sbjct: 517 LKEALVQGGRISLAQEVALKLDA 539
>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
Length = 528
Score = 205 bits (522), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 131/445 (29%), Positives = 225/445 (50%), Gaps = 21/445 (4%)
Query: 96 DVDKISKIL---SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAK 152
D D+++++L + + ++ L G GVS++ L+ Q L R A A+
Sbjct: 49 DADELARVLLAHHNPFHPAESPLQLLSGGGVSLTGGLLVQLLLRLRGASKLALSLLHAAR 108
Query: 153 TQTGYMHT---PEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
+++T P+ Y+ +VD L ++++F W +V +D +G S + + + RR V
Sbjct: 109 LHPSFVNTRPPPDAYDAVVDALARARQFDAAWRVV--VDASADGAASPRSFAVLARRYVA 166
Query: 210 GGRYDDAVEAFRGMKKY-GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
G AV AF M+ + G E ++ + L+DTL K + A ++F + K + ++
Sbjct: 167 AGMTRQAVRAFDDMEAFVGREANSAEFATLLDTLCKYKYPKVATEIFNKRKYKYNPNEKM 226
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE----KDFR------ 318
+ ILI+GWCK + D A+K +K+M G P++V+Y + CR D+R
Sbjct: 227 YTILIYGWCKVNRNDMARKFLKDMLDHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVH 286
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+D LKEM+++G +P V +Y+I++H +A + + ++ MK P + Y+S+I
Sbjct: 287 SAEDVLKEMRDRGIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTSVI 346
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE--DL 436
L+ GR++DA + ++M +GV P+ TYN R++ AL+L KM++ L
Sbjct: 347 KCLASCGRLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSL 406
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY LL M + R + + + M ++ V D +Y L+ G S K AC
Sbjct: 407 TAPDIHTYNILLGMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREAC 466
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKL 521
FF EMI KG +P T++ L L
Sbjct: 467 QFFMEMIEKGFLPQKITFETLYRGL 491
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 7/171 (4%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++AT +++++ L GR +DA M GV + N V A +++
Sbjct: 338 TVATYTSVIKCLASCGRLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLY 397
Query: 256 LEFKDCIPLSS---QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ K L++ +NIL+ + K + + +M + PD+ SYT I +C
Sbjct: 398 NKMKQPGSLTAPDIHTYNILLGMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFC 457
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
+ +R+ EM EKG P IT+ + L +A + L+ + ++K
Sbjct: 458 ASQKWREACQFFMEMIEKGFLPQKITFETLYRGLIQA----DMLRTWRRLK 504
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 205 bits (521), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 127/443 (28%), Positives = 226/443 (51%), Gaps = 9/443 (2%)
Query: 100 ISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMH 159
+ +I+S Q + ++ L GV++S LV + L+ SN A FF WA+ Q G+ +
Sbjct: 106 VCRIVSTQPEP--RIASTLDALGVAMSPELVAEVLKNLSNAGMLALAFFRWAERQEGFSY 163
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
T E ++ +++ LGK K+F L+W LV+ M G +S T I+RR R + +AVE
Sbjct: 164 TAEGFHNLIEALGKIKQFKLVWSLVETMR--CRGLLSKDTFKLIVRRYARARKVKEAVET 221
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK---DCIPLSSQIFNILIHGW 276
F M +G++ + + L+DTL K V+ A ++ E K +P + + +L+ GW
Sbjct: 222 FEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEMKRKGKFVP-DLKTYTVLMEGW 280
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ + + +EM G PDVV+Y I +C+ + EM+ GC PS
Sbjct: 281 GHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAIKVFYEMEASGCMPSP 340
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
Y ++++ LG ++++EALK +E+ K + ++++ +A + + A ++ ++
Sbjct: 341 HVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAYCRASKFEHAFKMVDE 400
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M++ + PN TY+ ++ + E A + Q+M D C+P TY ++ M C R
Sbjct: 401 MRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQLNTYTMMVGMFCSNGR 460
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ + + M + V +++L+ GL +LE AC +F+EM+ KGI P +
Sbjct: 461 VDMALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQEMLDKGIRPPGQLFSN 520
Query: 517 LEEKL-EKKRLGNAKERINKLLA 538
L+E L E R+ A+E +KL A
Sbjct: 521 LKEALVEGGRISLAQEMASKLDA 543
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 205 bits (521), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 136/473 (28%), Positives = 229/473 (48%), Gaps = 32/473 (6%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFF--TWAKT 153
D D +S+IL + + +L+ G+S++ SL+ QTL R ++ A F + +
Sbjct: 56 DADLLSQILLHHHNPFHAMESSLQLPGISLTPSLLHQTLLRLRHNSKIALSLFHHSLSLP 115
Query: 154 QTGYMHTPEM-----------------YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS 196
T + P YN M+D+L K ++F + W+L+ EMD+ N S
Sbjct: 116 PTSTDNPPTSTGTSTTSADSSTATTVTYNLMIDILAKVRQFDVCWQLIVEMDQRNVKPTS 175
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK-DTRALSVLMDTLVKGNSVEHAYKVF 255
T ++RRLV G A+ AF M+ + E + L+DTL K V+ ++F
Sbjct: 176 -ETFFVLIRRLVAAGLTRQAIRAFDDMESFVSEPVNETHFCFLLDTLCKYGYVKVGVEIF 234
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR-- 313
+ K + +++ +LI+GWCK ++D A++ +KE ++G VV+Y + CR
Sbjct: 235 NKRKHRFSPNVKMYTVLIYGWCKIGRIDMAERFLKETGERGIEATVVTYNVLLNGICRRA 294
Query: 314 --------EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
E+ ++ EM+E+G +P V +++IV+H +A + L + MK
Sbjct: 295 SLHPESRFERTITLAENLFDEMRERGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEK 354
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
P Y+S++ L GR++DA E+ +M + GV +TYN R + E+A
Sbjct: 355 GICPSVVTYTSVVKCLCSCGRIEDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAESA 414
Query: 426 LKLLQKMEED-LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
LKL +KM ED L +Y LL+M R+ ++N + + + + D +Y L+
Sbjct: 415 LKLYKKMREDGLGSLGLHSYNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIH 474
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
GL E K AC FF EMI KG++P T++ L + L + + R+ K L
Sbjct: 475 GLCEKEKWREACKFFVEMIEKGLLPQKVTFETLYKGLIQSDMLRTWRRLKKKL 527
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 106/222 (47%), Gaps = 2/222 (0%)
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY-KVFLEFKDCIPLSSQIFNILIH 274
A F M++ G+E D + S+++ + + E K+ L + I S + ++
Sbjct: 309 AENLFDEMRERGIEPDVTSFSIVLHVYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVK 368
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
C +++DA++ + EM + G S V+Y CF + Y KD K+M+E G
Sbjct: 369 CLCSCGRIEDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGS 428
Query: 335 -SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+ +Y I++ +++ +++E +KS PD Y+ LI L + + ++A +
Sbjct: 429 LGLHSYNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKF 488
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
F +M ++G++P +T+ T+ +L +K++E+
Sbjct: 489 FVEMIEKGLLPQKVTFETLYKGLIQSDMLRTWRRLKKKLDEE 530
>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 129/437 (29%), Positives = 208/437 (47%), Gaps = 20/437 (4%)
Query: 97 VDKISKIL---SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
D+++++L + + ++ L G GVS+S L+ Q L R A +
Sbjct: 45 ADELARLLLAHHNPFHPSESPLQLLSGGGVSLSQGLLVQILLRLRGASKLALSLLNAVRL 104
Query: 154 QTGYMHTP--EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGG 211
P + Y+ +VD LG++ +F W LV E +G + T + + RR V G
Sbjct: 105 HPSVSSPPNADAYDAVVDALGRAHQFDAAWRLVVEAAA--DGAATPRTFAVLARRYVAAG 162
Query: 212 RYDDAVEAFRGMKKY-GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
AV AF M+ + G E D + + L+DTL K + A +VF + K + +++
Sbjct: 163 LTRQAVRAFDDMEAFLGREPDAQEFTTLLDTLCKYKYPKVAVEVFNKRKYKYEPNEKMYT 222
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR----------EKDFRKV 320
ILI+GWCK + D AQK +K+M G P++V+Y + CR ++
Sbjct: 223 ILIYGWCKVNRSDMAQKFLKDMIDHGIEPNIVTYNILLNGICRHASLHPDNRFDRTVNAA 282
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
++ LKEM ++G +P V +Y+I++H +A + L ++ MK P + Y+S+I
Sbjct: 283 ENLLKEMNDRGIEPDVTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKC 342
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL--CK 438
L+ GR++DA + +M +GV P+ TYN R + AL+L KM+
Sbjct: 343 LASCGRLEDAESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKMKAPCSPTA 402
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PD +Y LL M + R + + L M + V D +Y LV G K AC F
Sbjct: 403 PDIHSYNILLGMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQF 462
Query: 499 FEEMISKGIVPYHSTYK 515
F EMI KG +P T++
Sbjct: 463 FMEMIEKGFLPQKITFE 479
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 77/171 (45%), Gaps = 7/171 (4%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++AT +++++ L GR +DA M GV + V A +++
Sbjct: 332 TVATYTSVIKCLASCGRLEDAESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELY 391
Query: 256 LEFK-DCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ K C P + I +NIL+ + K + + + +M ++ PD+ SYT + +C
Sbjct: 392 NKMKAPCSPTAPDIHSYNILLGMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFC 451
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
++ +R+ EM EKG P IT+ L +A + L+ + ++K
Sbjct: 452 AKEKWREACQFFMEMIEKGFLPQKITFETPYRGLIQA----DMLRTWRRLK 498
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 38/185 (20%)
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ Y V+ ALG+A Q + A ++ + +D +F + L AG + A
Sbjct: 112 PNADAYDAVVDALGRAHQFDAAWRLVVEAAADGAATPRTF-AVLARRYVAAGLTRQAVRA 170
Query: 394 FEDMKK-QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
F+DM+ G P+ + T++ + C + A+++ K + Y P KM
Sbjct: 171 FDDMEAFLGREPDAQEFTTLLDTLCKYKYPKVAVEVFNKRKYK--------YEPNEKM-- 220
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
Y L+ G + + ++A F ++MI GI P
Sbjct: 221 --------------------------YTILIYGWCKVNRSDMAQKFLKDMIDHGIEPNIV 254
Query: 513 TYKML 517
TY +L
Sbjct: 255 TYNIL 259
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 204 bits (520), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 115/434 (26%), Positives = 214/434 (49%), Gaps = 2/434 (0%)
Query: 74 ESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQT 133
E ++ + ++ S +VD++ K++ + + + L CG+++S+ LV
Sbjct: 42 EDNKCESGNNDGEKINSSADPVEVDRVCKVIDELFALDRNMEAVLDECGINLSHDLVIDV 101
Query: 134 LRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG 193
L RF + PAF FF WA + G+ H YN+M+ +L K+++F + +++EM G
Sbjct: 102 LERFCHARKPAFRFFCWAGEKQGFEHDSRTYNSMMSILAKTRQFETVVSMLEEMG--GKG 159
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+++ T S MR AV F MKKY + ++ L+D+L + + A
Sbjct: 160 VLTMDTFSIAMRAFAAAKERKKAVAMFELMKKYNYKVGVETINHLLDSLGRAKLGKEAQA 219
Query: 254 VFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+F K + + + +L++GWCK + + +A EM +GF PD+V++ +E R
Sbjct: 220 LFENLKGRFTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLR 279
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
K M+ KG P V +YTI++ L + ++ EA++ +++M C PD +
Sbjct: 280 SKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAV 339
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ LI R+ ++ ++MK++G P+ LTYN +I ++A ++ +KM
Sbjct: 340 YTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMT 399
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+ +P TY ++K + + ++ + M + D +Y L+ GLI G+
Sbjct: 400 QSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSG 459
Query: 494 LACSFFEEMISKGI 507
AC + EEM+ KG+
Sbjct: 460 EACKYLEEMLEKGM 473
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 3/216 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ + ++ L+R + DA++ F MK G D R+ ++L+ L + + +E A + F
Sbjct: 267 IVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQ 326
Query: 257 EFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E D C P + ++ LI G+ +++D +KEM ++G PD ++Y I+ R
Sbjct: 327 EMIDSGCKP-DAAVYTCLITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRL 385
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
K K+M + G +P++ TY ++M + + + V+++M PD + Y
Sbjct: 386 KMPDDAARIYKKMTQSGIEPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSY 445
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
+ LI L GR +A + E+M ++G+ L YN
Sbjct: 446 TVLIGGLISQGRSGEACKYLEEMLEKGMKAPQLDYN 481
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/281 (21%), Positives = 128/281 (45%), Gaps = 2/281 (0%)
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
S+ +N ++ KTR+ + ++EM +G + +++ + + K+ +K +
Sbjct: 129 SRTYNSMMSILAKTRQFETVVSMLEEMGGKGVLT-MDTFSIAMRAFAAAKERKKAVAMFE 187
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
M++ K V T ++ +LG+AK EA ++E +K P+ Y+ L+ K
Sbjct: 188 LMKKYNYKVGVETINHLLDSLGRAKLGKEAQALFENLKGR-FTPNLRTYTVLLNGWCKVK 246
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ +A ++ +M +G P+++ +N M+ + +A+KL M+ PD +Y
Sbjct: 247 NLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGPSPDVRSYT 306
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L++ CR+ +M+ M + DA Y L+ G ++++ +EM +
Sbjct: 307 ILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCLITGFGNRKRMDMVYDLLKEMKEE 366
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
G P TY L + + + ++ + RI K + + + T
Sbjct: 367 GCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTI 407
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 116/272 (42%), Gaps = 18/272 (6%)
Query: 69 LAGWVESHRLNEKSRISSRVLSENHETDVDKISKIL-----SKQYQSPDKVVEALKGCGV 123
L GW + L E + + ++ + + D+ + +L SKQ K+ +K G
Sbjct: 239 LNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQRSDAIKLFMVMKAKGP 298
Query: 124 SV---SNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLM 180
S S +++ + L R S + A +F +G +Y ++ G K+ ++
Sbjct: 299 SPDVRSYTILIRYLCRQSK-MEEAVEYFQ-EMIDSGCKPDAAVYTCLITGFGNRKRMDMV 356
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
++L+KEM E L T + +++ + R DDA ++ M + G+E +++M
Sbjct: 357 YDLLKEMKEEGCPPDGL-TYNALIKLMTRLKMPDDAARIYKKMTQSGIEPTIHTYNMIMK 415
Query: 241 TLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
+ + + E V+ E K P + +LI G + +A K ++EM ++G
Sbjct: 416 SYFQTRNYEMGRAVWDEMSRKGFCP-DDNSYTVLIGGLISQGRSGEACKYLEEMLEKGMK 474
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+ Y F R + D L+E+ ++
Sbjct: 475 APQLDYNKFGADLSRGGN----PDILEELAQR 502
>gi|357501403|ref|XP_003620990.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496005|gb|AES77208.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 422
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 225/438 (51%), Gaps = 73/438 (16%)
Query: 90 SENHETDVDKISKILSKQYQSPDKVVEALKGCG----VSVSNSLVEQTLRRFSNDLTPAF 145
S++ VD ++ + K S D ++++L G + +S +L+ + L R+ +D A
Sbjct: 46 SQDLTRSVDILTTKIGKG-NSEDVILQSLISDGAINVIHLSENLINRLLFRYKDDWKSAL 104
Query: 146 GFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMR 205
F WA + M E+++EM + SL + TI
Sbjct: 105 AVFRWAMEK-------------------------MREILEEMRQ-----ESLIALDTI-- 132
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS 265
+ DAV F ++ G+EK+T +++VL+DTL K VE A +++LE K + +
Sbjct: 133 -------WKDAVRTFDDLQFLGLEKNTESMNVLLDTLCKEKFVEQAREIYLELKHYVAPN 185
Query: 266 SQIFNILIHGWCKTRKVDDAQKAM-KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ FNILIHGWC R + + K + F+ S C
Sbjct: 186 AHTFNILIHGWCNIRLIPPLFNVIVKNIISTWFT--TFSMKC------------------ 225
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+ K P+V+TYT +M AL KA++ +EAL+V E+M + C PDT F++S I+ + +A
Sbjct: 226 ---KLKIAPPNVVTYTTIMCALAKAEKFDEALQVVERMNAVGCRPDTLFFNSFIYTMGRA 282
Query: 385 GRVKDANEIFE-DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED-LCKPDCE 442
GR+ DA IF+ M K V PN TYN+MIS C +++E A +L++ME+ LCKPD +
Sbjct: 283 GRIDDATHIFKVAMPKASVAPNTSTYNSMISMFCYYAQKERAFDILKEMEKSGLCKPDIQ 342
Query: 443 T-YAPLLKMCCRKKRMKV-LNFLLTHMF-KNDVSMDAGTYASLVRGLIESGKLELACSFF 499
T Y PL+K C + +++ LN +L+ M K + +D TY L+ GL + + + A + F
Sbjct: 343 TYYHPLIKSCFKMRKVDTWLNDILSDMVNKYHIGLDLSTYTLLIHGLCRADRCKWAFNLF 402
Query: 500 EEMISKGIVPYHSTYKML 517
EEM+ + I+P + T ++L
Sbjct: 403 EEMVDQDIMPRYKTCRLL 420
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 203 bits (517), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 126/428 (29%), Positives = 205/428 (47%), Gaps = 4/428 (0%)
Query: 113 KVVEALKGCGVSVSNSLVEQT-LRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL 171
+++ ++ S+ ++ Q+ R + FF WA Q G+ +PE YN MVD
Sbjct: 45 QIISTVRSISPSIVRHVIAQSSAVRHGIPVPQVLAFFNWASNQDGFRKSPEAYNEMVDFS 104
Query: 172 GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
G+ F + W + M + N V++ T +MRR VR G +A+ AF M+ Y + D
Sbjct: 105 GQVMMFDVAWYFIDLM-KARNVDVTVETFLILMRRYVRAGLAAEAIHAFNRMEDYNCKPD 163
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKE 291
A S+L+ L + A + F KD ++ L+ GWC+ + +A++ E
Sbjct: 164 KIAFSILISILCRERRASQAQEFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGE 223
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M G P+V +Y+ I+ CR + D EM + GC+P+ ITY +M KA +
Sbjct: 224 MKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGR 283
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+ L+VY +MK C PDT Y+ LI K ++DA ++ M K+G PN T+NT
Sbjct: 284 TEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNASTFNT 343
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+ + A ++ +KM+E C+ + TY L+KM K ++ L T M +N
Sbjct: 344 LFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTEMDENK 403
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMIS-KGIVPYHSTYKMLEEKLEKK-RLGNA 529
+ + TY L+ G A FF EMI K + P Y M+ ++L K +L
Sbjct: 404 IEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAGQLKKH 463
Query: 530 KERINKLL 537
+E + K++
Sbjct: 464 EELVEKMV 471
>gi|449437378|ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
gi|449503560|ref|XP_004162063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
Length = 615
Score = 202 bits (513), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 140/473 (29%), Positives = 225/473 (47%), Gaps = 17/473 (3%)
Query: 79 NEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVE-ALKGCGVSVSNSLVEQTLRRF 137
N S I + + D+ IS ILS + P +E AL G+ S+SL+E F
Sbjct: 71 NPNSAIDVKFEASYSPNDLSTISSILSDRSVRPGAALEDALDRTGIVPSSSLLEAVFDHF 130
Query: 138 SNDLTPAF--GFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-- 193
D +P F F WA ++G+ + ++N +++VL KS++F W L+ L G
Sbjct: 131 --DSSPKFLHSLFLWAAKKSGFRPSAALFNRLINVLAKSREFDSAWSLIT--SRLRGGEE 186
Query: 194 --YVSLATMSTIMRRLVRGGRYDDAVEAFR---GMKKYGVEKDTRALSVLMDTLVKGNSV 248
VS+ ++RR R G A+ + ++ +L+D+L K V
Sbjct: 187 SFLVSVEVFVILIRRYARAGMVQPAIRTYEFACNLETISGTGSEGLFEILLDSLCKEGHV 246
Query: 249 EHAYKVF---LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
A + F E S + +NILI+GW ++RK+ AQ+ EM + SP VV+Y
Sbjct: 247 RVASEYFNRKREMGSSFEPSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYG 306
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
IE YCR + + + EM+ +G +P+ I Y ++ ALG+A + EAL + E+
Sbjct: 307 TLIEGYCRMRSVEIAIELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVL 366
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
+ P S Y+SL+ KAG + A++I + M +G P TYN + E +
Sbjct: 367 EQGPTISTYNSLVKGYCKAGDLSGASKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEES 426
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
+ L KM E PD TY LLKM C ++R+ + + M MD T L+
Sbjct: 427 MSLYNKMIESGYAPDKLTYHLLLKMLCEEERLNLAVQVCNEMKARGFDMDLATSTMLMHL 486
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
L + K E A + FE MI +GIVP + T+ L ++ K+ L ++ ++++
Sbjct: 487 LCKMHKFEEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMMS 539
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 115/428 (26%), Positives = 216/428 (50%), Gaps = 2/428 (0%)
Query: 80 EKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSN 139
E+ + V S +V K+ K++ + + + L CG+++S+ LV + L RF +
Sbjct: 59 ERENKGAIVKSTADPAEVHKVCKVIDELFALDHNMEAVLDECGINLSHDLVIEVLERFRH 118
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
PAF FF WA + G++H Y++M+ +L K+++F M +++EM E ++L T
Sbjct: 119 ARKPAFRFFCWAAEKPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGE--KRLLTLDT 176
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
S MR AV F MK + ++ L+D+L + + A +F + +
Sbjct: 177 FSIAMRAFAAAKERKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKLE 236
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ + + +L++GWC+ + + +A + EM +GF PD+V++ +E R K
Sbjct: 237 GRFTPNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKRSD 296
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ M+ KG P V +YTI++ L K ++ EA+ + +M C PD + Y+ L+
Sbjct: 297 AIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCLMT 356
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
R+ E+ ++MK++G P+ TYN +I ++ ++A+++ +KM ++ +P
Sbjct: 357 GYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYKKMIQNGIEP 416
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
+Y ++K R + ++ + + M K D +Y + GLI G+ E AC +
Sbjct: 417 SIHSYNMIMKSYFRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYL 476
Query: 500 EEMISKGI 507
EEMI KG+
Sbjct: 477 EEMIEKGM 484
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 146/319 (45%), Gaps = 18/319 (5%)
Query: 122 GVSVSNSLVEQTLR-RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLM 180
GV N+L++ R + + FG K + + Y +++ + K
Sbjct: 208 GVETINALLDSLGRAKLGKEAQALFG-----KLEGRFTPNLRTYTVLLNGWCRVKNLMEA 262
Query: 181 WELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+ EM L+ G+ + T + ++ L+R + DA++ F MK G D R+ ++L+
Sbjct: 263 GRIWNEM--LDEGFKPDIVTHNIMLEGLLRSKKRSDAIKFFEVMKAKGPSPDVRSYTILI 320
Query: 240 DTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
L K ++ A F E D C P + ++ L+ G+ +++D + +KEM ++G
Sbjct: 321 RDLCKQTKMKEAVGYFYEMVDSGCHP-DAAVYTCLMTGYGNHKRMDMVYELLKEMKEKGC 379
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSVITYTIVMHALGKAKQINE 354
PD +Y I+ + R DD + K+M + G +PS+ +Y ++M + + +
Sbjct: 380 PPDGKTYNALIKLMTSQ---RMPDDAVRIYKKMIQNGIEPSIHSYNMIMKSYFRIRNYEM 436
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
V+++M PD + Y+ I L GR ++A + E+M ++G+ L YN +
Sbjct: 437 GHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRSEEACKYLEEMIEKGMKAPQLDYNKFAA 496
Query: 415 SACARSEEENALKLLQKME 433
+ + +L QKM+
Sbjct: 497 DFSRAGKPDILEELAQKMK 515
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 106/233 (45%), Gaps = 1/233 (0%)
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+++ + + K+ +K + M+ + V T ++ +LG+AK EA ++ K+
Sbjct: 176 TFSIAMRAFAAAKERKKAVGIFELMKNHKYRVGVETINALLDSLGRAKLGKEAQALFGKL 235
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+ P+ Y+ L+ + + +A I+ +M +G P+++T+N M+ +
Sbjct: 236 EGR-FTPNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKKR 294
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+A+K + M+ PD +Y L++ C++ +MK M + DA Y L
Sbjct: 295 SDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTCL 354
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
+ G ++++ +EM KG P TY L + + +R+ + RI K
Sbjct: 355 MTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNALIKLMTSQRMPDDAVRIYK 407
>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 511
Score = 201 bits (511), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 223/463 (48%), Gaps = 31/463 (6%)
Query: 97 VDKISKIL---SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
D+++++L + + ++ L G GVS++ L+ Q L R A A+
Sbjct: 33 ADELARLLLAHHNPFHPAESPLQLLSGGGVSLTGDLLVQLLLRLRGASKLALSLLHAAR- 91
Query: 154 QTGYMHTP--------EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMR 205
+H P + Y+ +VD LG++++F W LV E +G + T + + R
Sbjct: 92 ----LHPPPAASSRAADAYDAVVDALGRARQFDAAWRLVVEAAA--DGAATPRTFAVLAR 145
Query: 206 RLVRGGRYDDAVEAFRGMKKY-GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL 264
R V G AV AF M+ + G E D + L+DTL K + A +VF + K
Sbjct: 146 RYVAAGMTRQAVRAFDDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEP 205
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR----------E 314
+ +++ +LI+GWCK + D AQK +K+M G P++V+Y + CR +
Sbjct: 206 NEKMYTVLIYGWCKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFD 265
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ R +D LKEM ++G +P+V +Y++++H +A + L ++ MK P + Y
Sbjct: 266 RTVRAAEDLLKEMHQRGIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATY 325
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+S+I L+ GR+ DA + ++M +GV P+ TYN R + AL+L KM+
Sbjct: 326 TSVIKCLASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKA 385
Query: 435 --DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
PD TY LL M + + + + M ++ V D +Y LV GL ++ K
Sbjct: 386 PGSPATPDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKW 445
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
AC FF EMI +G +P T++ L L + + R+ K
Sbjct: 446 REACQFFMEMIERGFLPQKITFETLYRGLIQADMLRTWRRLKK 488
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 201 bits (510), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 209/421 (49%), Gaps = 9/421 (2%)
Query: 124 SVSNSLVEQTLR-----RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFC 178
SVS+++V + + R FF WA + H+PE Y M+D+ GK ++F
Sbjct: 104 SVSSAIVRRVIEKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFD 163
Query: 179 LMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVL 238
L W+L+ M + N + + T + ++RR V+ G +AV AF M+ YG + D A SV+
Sbjct: 164 LAWQLIDLM-KTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVV 222
Query: 239 MDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
+ +L K A F KD ++ L+HGWC+ + +A++ EM G
Sbjct: 223 ISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQ 282
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P+V +Y+ I+ CR + D EM + GC P+ IT+ +M KA + + L+V
Sbjct: 283 PNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQV 342
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
Y +MK C PD Y+ LI + +++A +I +KK G N ++N +
Sbjct: 343 YNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK-GCNLNASSFNPIFGCISK 401
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ +A ++ KM++ C+P+ TY L++M KK ++ L M +N++ +A T
Sbjct: 402 LGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANT 461
Query: 479 YASLVRGLIESGKLELACSFFEEMI-SKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
Y L+ G A SFF+EMI K + P Y+M+ ++L K +L +E + K+
Sbjct: 462 YRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKM 521
Query: 537 L 537
+
Sbjct: 522 V 522
>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
Length = 511
Score = 201 bits (510), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/463 (28%), Positives = 222/463 (47%), Gaps = 31/463 (6%)
Query: 97 VDKISKIL---SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
D+++++L + + ++ L G GVS++ L+ Q L R A A+
Sbjct: 33 ADELARLLLAHHNPFHPAESPLQLLSGGGVSLTGDLLVQLLLRLRGASKLALSLLHAAR- 91
Query: 154 QTGYMHTP--------EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMR 205
+H P + Y+ +VD LG++++F W LV E +G + T + + R
Sbjct: 92 ----LHPPPAASSRAADAYDAVVDALGRARQFDAAWRLVVEAAA--DGAATPRTFAVLAR 145
Query: 206 RLVRGGRYDDAVEAFRGMKKY-GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL 264
R V G AV AF M+ + G E D + L+DTL K + A +VF + K
Sbjct: 146 RYVAAGMTRQAVRAFDDMEAFVGREPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEP 205
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR----------E 314
+ +++ +LI+GWCK + D AQK +K+M G P++V+Y + CR +
Sbjct: 206 NEKMYTVLIYGWCKVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFD 265
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ R +D LKEM ++G +P V +Y++++H +A + L ++ MK P + Y
Sbjct: 266 RTVRAAEDLLKEMHQRGIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATY 325
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+S+I L+ GR+ DA + ++M +GV P+ TYN R + AL+L KM+
Sbjct: 326 TSVIKCLASCGRLDDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKA 385
Query: 435 --DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
PD TY LL M + + + + M ++ V D +Y LV GL ++ K
Sbjct: 386 PGSPATPDIHTYNILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKW 445
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
AC FF EMI +G +P T++ L L + + R+ K
Sbjct: 446 REACQFFMEMIERGFLPQKITFETLYRGLIQADMLRTWRRLKK 488
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 209/421 (49%), Gaps = 9/421 (2%)
Query: 124 SVSNSLVEQTLR-----RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFC 178
SVS+++V + + R FF WA + H+PE Y M+D+ GK ++F
Sbjct: 1136 SVSSAIVRRVIEKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKVRQFD 1195
Query: 179 LMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVL 238
L W+L+ M + N + + T + ++RR V+ G +AV AF M+ YG + D A SV+
Sbjct: 1196 LAWQLIDLM-KTRNVEIPVETFTILVRRYVKAGLAAEAVHAFNRMEDYGCKPDKIAFSVV 1254
Query: 239 MDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
+ +L K A F KD ++ L+HGWC+ + +A++ EM G
Sbjct: 1255 ISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIX 1314
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P+V +Y+ I+ CR + D EM + GC P+ IT+ +M KA + + L+V
Sbjct: 1315 PNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQV 1374
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
Y +MK C PD Y+ LI + +++A +I +KK G N ++N +
Sbjct: 1375 YNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK-GCNLNASSFNPIFGCISK 1433
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ +A ++ KM++ C+P+ TY L++M KK ++ L M +N++ +A T
Sbjct: 1434 LGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANT 1493
Query: 479 YASLVRGLIESGKLELACSFFEEMI-SKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
Y L+ G A SFF+EMI K + P Y+M+ ++L K +L +E + K+
Sbjct: 1494 YRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKM 1553
Query: 537 L 537
+
Sbjct: 1554 V 1554
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 227/459 (49%), Gaps = 18/459 (3%)
Query: 94 ETDVDKISKILSKQYQSPDKVVE-ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAK 152
++D I +L+ S +E AL G+ + L++ F P F F WA
Sbjct: 69 QSDFSTICALLTDPALSSGAPLEDALNRTGIKPCSGLLQAIFSHFDASPKPLFTLFRWAM 128
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG----YVSLATMSTIMRRLV 208
Q G+ + ++N+M+DVL KS+ F W LV +D + G VS T + ++RR
Sbjct: 129 KQPGFESSMTLFNSMIDVLAKSRAFDSAWLLV--LDRIEGGEEPELVSSNTFAVLIRRYA 186
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRA----LSVLMDTLVKGNSVEHAYKVFLEFKDCIP- 263
R G A+ F +D + +L+D+L K V A + F + + P
Sbjct: 187 RAGMTLSAIRTFEFAFSLDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDPS 246
Query: 264 --LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
S +++N+L++GW ++RK+ A++ + M ++ P VV+Y +E YCR + K
Sbjct: 247 WVPSIRVYNVLLNGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAI 306
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ + EM+ KG +P+VI Y ++ +L +A + EA+ + E+ + P S Y+SL+
Sbjct: 307 ELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGMMERCLVSETGPTISTYNSLVKGF 366
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS--SACARSEEENALKLLQKMEEDLCKP 439
KAG + A+++ + M +G P + TYN S C ++EE + L KM E P
Sbjct: 367 CKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSRCGKTEE--GMNLYTKMIESGHTP 424
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY L+KM C ++R+ + + M +D T LV L + +LE A + F
Sbjct: 425 DRLTYHLLIKMMCEEERLDLAVQVSKEMRARGCDLDLATSTMLVHLLCKMHRLEEAFAEF 484
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
E+MI +GIVP + T++ + L K+ L ++ ++A
Sbjct: 485 EDMIRRGIVPQYLTFERMNNALRKRGLTEMARKLCDMMA 523
>gi|218202055|gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
Length = 586
Score = 199 bits (507), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 213/445 (47%), Gaps = 9/445 (2%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V + ++LS + AL+G ++ LRR + P+ FF +A G
Sbjct: 65 VGSLCRVLSDFRGPRHDLPAALRGFAPWLTPGDAAAVLRRCRHLPLPSLRFFLFAGELPG 124
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ H P+ + + L ++ F L+ L + +L +S + R R +DA
Sbjct: 125 FSHHPDSLLVLANSLAGARLFPLLRSL---LSDLPPSALSRGLFPLLFRAYSRARLPEDA 181
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
+ AF M +G L+ L + VE+ + F E +S++ + ILI GW
Sbjct: 182 IRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERFFRESSAQFDVSAKAYTILISGW 241
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GCKPS 335
+K ++A+ EM ++G DV Y I+ CR D + L MQ+ G P+
Sbjct: 242 AVVKKPENARSLFDEMVERGVELDVHVYNALIDALCRGGDITSAQEQLSNMQKSHGLVPN 301
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
TY +HA +K + AL+V ++M + P+ Y+++I +L G + +A I +
Sbjct: 302 AATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDLGEINEAYNILD 361
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
++ QG P+V +YNT++++ C E AL+L+ +M+++LC PD +Y LLKM
Sbjct: 362 EITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRHSYNMLLKMLIGVG 421
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFFEEMISKGIVPYHSTY 514
R + M K A TYA ++ GL + G+ E ACS+F M+ +GI PY +T
Sbjct: 422 RFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDACSYFVRMVDEGIPPYQATC 481
Query: 515 KMLEEKL----EKKRLGNAKERINK 535
++L ++L + +LG +R+ +
Sbjct: 482 EVLRDRLLMLGLRDQLGVLTDRMRR 506
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 199 bits (506), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 139/499 (27%), Positives = 230/499 (46%), Gaps = 25/499 (5%)
Query: 64 FVIPSLAGWVESHRLNEKSRISSRV-LSENHETDVDKISKILSKQYQS------------ 110
F + S + V H N+ + LS VDK I+ Y+
Sbjct: 24 FRLCSSSPLVSEHDTNDNNTTPQNTNLSPEDTHIVDKFHTIIKDHYRKNPNPNAVSPSLN 83
Query: 111 ---PDKVVEALKGCGV-SVSNSLVEQTLRRFSN-----DLTPAFGFFTWAKTQTGYMHTP 161
PD +E K V SVS S+ + + + S + FF WA T G+ +P
Sbjct: 84 LSIPDLSIEFSKISTVYSVSPSITRRAIEKCSGVRHGIPFLQSLAFFNWATTLEGFPSSP 143
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
E YN M+D+ GK + F L W L+ M ++++T S ++RR VR G +AV AF
Sbjct: 144 EPYNEMIDLAGKLRHFDLAWHLIDLMKS-RGVRITVSTFSVLVRRYVRAGLAAEAVHAFN 202
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRK 281
M+ YG + D + S+++ +L K A F K ++ L+HGWC+
Sbjct: 203 RMEDYGCKPDKVSFSIVISSLCKKRRASEAELFFDSLKHKFEPDVIVYTSLVHGWCRAGD 262
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ A++ +M + G P+V +Y+ I+ CR + D EM + GC P+ +T+
Sbjct: 263 IAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCRCGQITRAHDVFSEMIDAGCDPNAVTFNS 322
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+M KA + + L+VY +MK C DT Y+ LI K + +A ++ + M K+G
Sbjct: 323 LMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESHCKDENLDEAVKVLDTMVKKG 382
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V PN T+N++ + A ++ KM+E C P+ TY L++M K + ++
Sbjct: 383 VAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNTLTYNILMRMFADSKSIDMVL 442
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI-SKGIVPYHSTYKMLEEK 520
L M +++V + TY L+ E G A + +EM+ K + P S Y+ + E
Sbjct: 443 KLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKEMVEEKCLKPNLSIYETVLEL 502
Query: 521 LEKK-RLGNAKERINKLLA 538
L +L +E + K++A
Sbjct: 503 LRNAGQLKKHEELVEKMVA 521
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 130/283 (45%), Gaps = 6/283 (2%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
V V SLV R + D+ A F+ K + G Y+ ++D L + + +
Sbjct: 247 VIVYTSLVHGWCR--AGDIAKAEEVFSDMK-EAGVKPNVYTYSIVIDSLCRCGQITRAHD 303
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
+ EM + + T +++MR V+ GR + ++ + MK+ G DT + + L+++
Sbjct: 304 VFSEMIDAGCD-PNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTISYNFLIESH 362
Query: 243 VKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
K +++ A KV K + ++ FN + + V+ A + +M + P+
Sbjct: 363 CKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMKELKCMPNT 422
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
++Y + + K V KEM E +P+V TY I++ + N A + ++
Sbjct: 423 LTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWNNAYNLMKE 482
Query: 362 MKSDDCL-PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
M + CL P+ S Y +++ +L AG++K E+ E M +G V
Sbjct: 483 MVEEKCLKPNLSIYETVLELLRNAGQLKKHEELVEKMVARGFV 525
>gi|222641466|gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japonica Group]
Length = 579
Score = 199 bits (505), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 123/445 (27%), Positives = 211/445 (47%), Gaps = 9/445 (2%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V + ++LS + AL+G LRR + P+ FF +A G
Sbjct: 58 VGSLCRVLSDFRGRGQDLPAALRGFAPGFQPRDAAAVLRRCRHLPLPSLRFFLFAGELPG 117
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ H P+ + + L ++ F L+ L + +L +S + R R +DA
Sbjct: 118 FSHHPDSLLVLANSLAGARLFPLLRSL---LSDLPPSALSRGLFPLLFRAYSRARLPEDA 174
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
+ AF M +G L+ L + VE+ + F E +S++ + ILI GW
Sbjct: 175 IRAFSSMAGFGFPPTIADFHSLLFALSRNGLVEYGERFFRESTAQFDVSAKAYTILISGW 234
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GCKPS 335
+K ++A+ EM ++G DV Y I+ CR D + L MQ+ G P+
Sbjct: 235 AVVKKPENARSLFDEMVKRGVELDVHVYNALIDALCRGGDITSAQEQLSNMQKSHGLVPN 294
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
TY +HA +K + AL+V ++M + P+ Y+++I +L G + +A I +
Sbjct: 295 AATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDLGEINEAYNILD 354
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
++ QG P+V +YNT++++ C E AL+L+ +M+++LC PD +Y LLKM
Sbjct: 355 EITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRHSYNMLLKMLISVG 414
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFFEEMISKGIVPYHSTY 514
R + M K A TYA ++ GL + G+ E ACS+F M+ +GI PY +T
Sbjct: 415 RFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDACSYFVRMVDEGIPPYQATC 474
Query: 515 KMLEEKL----EKKRLGNAKERINK 535
++L ++L + +LG +R+ +
Sbjct: 475 EVLRDRLLMLGLRDQLGVLTDRMRR 499
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 115/417 (27%), Positives = 205/417 (49%), Gaps = 2/417 (0%)
Query: 91 ENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTW 150
E T+V+++ K++ + + + L CGV +S+ LV + L RF PAF FF W
Sbjct: 139 ECDSTEVNRVCKVIDELFALDRNMEAVLDECGVKLSHDLVLEVLARFKQARKPAFRFFCW 198
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A + G+ H + YNTM+ +LGK+++F M L++EM E +++ T + +
Sbjct: 199 AAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEMAE--KELLTMETFTVCFKAFAAA 256
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
AV MKKY + ++ L+D+L + + A +F + + Q +
Sbjct: 257 KERKKAVGVLELMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGRFTPNLQTYT 316
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+L++GWC+ R + +A K +M + F PD+V++ +E R K + M+ K
Sbjct: 317 VLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAK 376
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P V +YTI++ K ++ EA++ +E+M+ C PD + Y+ LI R+
Sbjct: 377 GPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTV 436
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ ++MK G P+ TYN +I + ++A+++ +KM E+ KP TY+ ++K
Sbjct: 437 YGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPTTHTYSMMMKS 496
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + ++ M D +Y + GLI G+ A + EEMI KG+
Sbjct: 497 YFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLEEMIEKGM 553
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 114/238 (47%), Gaps = 9/238 (3%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+T++ L+R + DA++ F MK G D ++ ++L+ K ++ A + F E +
Sbjct: 351 NTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQG 410
Query: 261 --CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
C P + I+ LI G+ +++D +KEM G PD +Y I+ + R
Sbjct: 411 AGCRP-DAAIYTCLITGFGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNK---R 466
Query: 319 KVDDTL---KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
DD + K+M E G KP+ TY+++M + + + + +++MK C PD + Y+
Sbjct: 467 MPDDAVRIYKKMIENGIKPTTHTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYT 526
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
I L GR +A + E+M ++G+ L YN + + +L QKM+
Sbjct: 527 VFIGGLISLGRCAEAGKYLEEMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMK 584
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 124/270 (45%), Gaps = 2/270 (0%)
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
S+ +N ++ KTR+ + ++EM ++ CF + + K+ +K L+
Sbjct: 209 SKTYNTMMTILGKTRQFETMVSLLEEMAEKELLTMETFTVCF-KAFAAAKERKKAVGVLE 267
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
M++ K V T ++ +LG+AK EAL ++EK+ P+ Y+ L+ +
Sbjct: 268 LMKKYKYKVGVETINCLLDSLGRAKLGKEALTIFEKLHGR-FTPNLQTYTVLLNGWCRVR 326
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ +A +I+ M + P+++ +NTM+ + +A+KL + M+ PD ++Y
Sbjct: 327 NLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKRSDAIKLFEVMKAKGPSPDVKSYT 386
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L++ C++ +MK M DA Y L+ G +++ +EM +
Sbjct: 387 ILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITGFGNQKRMDTVYGLLKEMKAN 446
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
G P TY L + + KR+ + RI K
Sbjct: 447 GCPPDGKTYNALIKLMTNKRMPDDAVRIYK 476
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 196 bits (499), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 208/412 (50%), Gaps = 2/412 (0%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
+V ++ +++ + + + L C V +S++LV L RF + PAF FF WA +
Sbjct: 204 EVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKA 263
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ H YN M+ VLG++++F M ++ EM E G +++ T S ++
Sbjct: 264 GFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGE--KGLLTMETFSIAIKAFAAAKERKK 321
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
AV F MK+Y + ++ L+D L + + A +F + +D + + + +L++G
Sbjct: 322 AVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNG 381
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
WC+ + + +A + EM +GF PD++++ +E + K + M+ KG P+
Sbjct: 382 WCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPN 441
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V TYTI++ L K ++ EA++ +++M C PD + Y+ LI ++ + +
Sbjct: 442 VRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLK 501
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+MK++G + TYN +I R ++A+++ +KM ++ +P TY ++K +
Sbjct: 502 EMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMMMKSYFYTR 561
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
++ + M + D +Y + GLI G+ E AC + EEMI KG+
Sbjct: 562 NYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGM 613
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/294 (23%), Positives = 139/294 (47%), Gaps = 1/294 (0%)
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
+K G ++R + +M L + E + E + L+ + F+I I + ++
Sbjct: 261 QKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAAKERK 320
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A + M + F V + C +++ R K ++ ++++++ P++ TYT+++
Sbjct: 321 KAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR-FTPNLRTYTVLL 379
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ + K + EA + + +M PD + +++ L K + DA ++FE MK +G
Sbjct: 380 NGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPS 439
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
PNV TY +I C + + + A++ +M + C+PD Y L+ +K+M + L
Sbjct: 440 PNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYAL 499
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M + D TY +L++ + + A +++MI GI P TY M+
Sbjct: 500 LKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYNMM 553
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 129/282 (45%), Gaps = 2/282 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+S+ +N ++ +TR+ + + EM ++G + +++ I+ + K+ +K
Sbjct: 268 NSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLL-TMETFSIAIKAFAAAKERKKAVGVF 326
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+ M+ V T ++ LG+AK EA ++EK++ D P+ Y+ L+ +
Sbjct: 327 ELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLE-DRFTPNLRTYTVLLNGWCRI 385
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
+ +A + +M +G P+++ ++TM+ ++ +A+KL + M+ P+ TY
Sbjct: 386 KNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTY 445
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L++ C++ +MK M + DA Y L+ G K++ + +EM
Sbjct: 446 TILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKE 505
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
KG TY L + + +++ + RI K + Q T
Sbjct: 506 KGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTL 547
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 1/153 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFN 270
+ D + MK+ G D R + L+ + + A +++ + ++ I + +N
Sbjct: 492 KMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQPTLHTYN 551
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+++ + TR + KEM ++G PD SY FI R + L+EM EK
Sbjct: 552 MMMKSYFYTRNYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEK 611
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
G K + Y +A + + ++ KMK
Sbjct: 612 GMKAPQLDYNKFAADFSRAGKPDILEELARKMK 644
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 196 bits (498), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 138/477 (28%), Positives = 231/477 (48%), Gaps = 16/477 (3%)
Query: 75 SHRLNEKSRISS--RVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQ 132
SHR N S I+ +S + D + ISKIL + +L+ G++++ L+ Q
Sbjct: 8 SHR-NFNSSITRFFSSISSQTQNDAELISKILLTHHNPYHFTESSLQLNGITLTPILLTQ 66
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
TL + A ++K+ + + YN ++D++ K +F L +L+ EMD++N
Sbjct: 67 TLTLLKHHSKIALSLHNFSKSLPNPPLSLQSYNLLIDIVSKVHQFDLASQLIVEMDQINL 126
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR-ALSVLMDTLVKGNSVEHA 251
+ T +++RL+ AV AF ++ Y K T + L+DTL K V+HA
Sbjct: 127 P-PTPTTFFILIKRLISANLTRQAVRAFNEIESYTDTKLTSDHFTYLLDTLCKYGYVKHA 185
Query: 252 YKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
++F + +++ +LI+GWCK + A + EM +G P+VV+Y +
Sbjct: 186 CELFNRNSNRFVADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGI 245
Query: 312 CR----------EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
CR E+ R + EM+E G +P V +++IV+H +A + L
Sbjct: 246 CRKASLHPEERFERTIRDAEKVFDEMRESGIEPDVTSFSIVLHVYSRAHKPQLVLDKLGL 305
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
MK P+ Y+S+I L GR+++A ++ ++M + GV P TYN R +
Sbjct: 306 MKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKD 365
Query: 422 EENALKLLQKMEED-LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+ ALK +KM+ED LC+P TY L+ M + + V+ + M ++ V D +Y
Sbjct: 366 ADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYT 425
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
L+ GL ES K AC +F EMI KG +P T++ L L + + R+ K L
Sbjct: 426 VLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRLKKRL 482
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 75/170 (44%), Gaps = 2/170 (1%)
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ LI I+SK + A+++ +M + + P T+ +I + + A++ ++E
Sbjct: 98 YNLLIDIVSKVHQFDLASQLIVEMDQINLPPTPTTFFILIKRLISANLTRQAVRAFNEIE 157
Query: 434 EDL-CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
K + + LL C+ +K L N D Y L+ G + G+
Sbjct: 158 SYTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRN-SNRFVADVKMYTVLIYGWCKIGRF 216
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKE 542
+ A SF EM KG+ P TY ++ + +K + +ER + + A++
Sbjct: 217 KTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLHPEERFERTIRDAEK 266
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 196 bits (497), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 203/418 (48%), Gaps = 6/418 (1%)
Query: 118 LKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKF 177
L+ CG + S +V L R N A F WA Q GY Y++M+ +L K ++F
Sbjct: 102 LERCGATASEPVVVAVLARLRNSCAAAHAAFRWASAQPGYAPGRHAYHSMLAILAKHRRF 161
Query: 178 CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
L+ +M + S A + ++RR AV AFR + G
Sbjct: 162 DDARALLDQMRR--SSLASPAAVMLLIRRYCAARDVAGAVAAFRALPSLGFRPGVAEFHG 219
Query: 238 LMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCK-TRKVDDAQKAMKEMFQQG 296
L+ L + +V+ A + L + P ++ FN++++GWC R V +A++ M +G
Sbjct: 220 LLTALCRYKNVQDAEHLLLSSEKEFPFETKSFNVVLNGWCNMVRSVREAKRFWNAMEIKG 279
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
DVVSY I + + V M+E G P Y V++AL K + +NEA
Sbjct: 280 IKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVVPDRKIYNAVVYALAKGRCVNEAK 339
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ M+ PDT+ ++SLI L KA +V++A ++ +DM +G+ P+V T++ ++
Sbjct: 340 ALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRGLSPSVRTFHALLD-- 397
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
ARS E LL KM+E C P+ +T+ L++ CR ++ + L + M N +S D
Sbjct: 398 VARSPIE-VFDLLDKMKELQCDPEMDTFIMLIRKFCRWRQHDSVEKLWSAMPANGLSPDR 456
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
Y L+ GL +G+LE + ++EEM +KG P T +M++ L + L A +
Sbjct: 457 SAYIVLIHGLFLNGRLEESAKYYEEMKAKGFPPEKKTEEMIQAWLSGRELAKASASVG 514
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 194 bits (493), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 119/435 (27%), Positives = 214/435 (49%), Gaps = 4/435 (0%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
+V+++ K++ + + + L CGV +S+ LV L+RF + PAF FF A +
Sbjct: 34 VEVERVCKVIDELFALDRNMEVVLDECGVRLSHDLVVDVLQRFKHARKPAFRFFCXAGKR 93
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G+ H YN M+ VLG++++F M ++EM E G +++ T S ++ +
Sbjct: 94 PGFAHDSRTYNFMMCVLGRTRQFETMVAKLEEMGE--KGLLTMETFSIAIKAFAEAKQRK 151
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
V F MKKYG + ++ L+D+L + A VF + KD S Q + IL+
Sbjct: 152 KEVGIFDLMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPSLQTYTILLS 211
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
GWC+ + + +A + EM +GF+PD+V++ +E + K + M+ KG P
Sbjct: 212 GWCRLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSP 271
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V +YTI++ K K + EA++ ++ M C PD + Y+ LI + ++ +
Sbjct: 272 NVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLL 331
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M+++G P+ TYN +I ++ ++A+++ +KM + KP TY ++K
Sbjct: 332 KEMRERGCPPDGRTYNALIKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTYNMIMKSYFVT 391
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
K ++ + + M D +Y + GLI + AC + EEM+ KG+ Y
Sbjct: 392 KNYEMGHEIWDEMHPKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLEKGMKALKLDY 451
Query: 515 KMLEEKLEKKRLGNA 529
+ K GNA
Sbjct: 452 NKFASDISKT--GNA 464
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 123/270 (45%), Gaps = 2/270 (0%)
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
S+ +N ++ +TR+ + ++EM ++G + +++ I+ + K +K
Sbjct: 100 SRTYNFMMCVLGRTRQFETMVAKLEEMGEKGLLT-METFSIAIKAFAEAKQRKKEVGIFD 158
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
M++ G K V ++ +L AK EA V+EK+K D P Y+ L+ +
Sbjct: 159 LMKKYGFKVGVDVINFLLDSLSTAKLGKEAQAVFEKLK-DRFTPSLQTYTILLSGWCRLK 217
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ +A ++ +M +G P+++ +N M+ ++ +A+KL + M+ P+ +Y
Sbjct: 218 NLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFEIMKAKGPSPNVRSYT 277
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
+++ C++K M M DA Y L+ G K+++ S +EM +
Sbjct: 278 IMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQKKMDMVYSLLKEMRER 337
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
G P TY L + + + + + RI K
Sbjct: 338 GCPPDGRTYNALIKLMTSQHMPDDAVRIYK 367
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/415 (29%), Positives = 208/415 (50%), Gaps = 9/415 (2%)
Query: 104 LSKQYQ--SPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAK---TQTGYM 158
L K Y+ S ++ AL C +S+++ LV L+R +D PA+ FF WA ++GY
Sbjct: 93 LLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIESGYS 152
Query: 159 HTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
++N ++D+LG+ ++F M +L EM + G V+ T ++ R + ++AV+
Sbjct: 153 PGCGVHNEILDILGRMRRFHEMTQLFDEMSK-RKGLVNERTFGVLLNRYAAAHKTEEAVK 211
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCK 278
F K G E D A L+ +L + VE A +F K+ P + N++++GWC
Sbjct: 212 IFNKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWCV 271
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ +A++ ++ PD +Y FI + + M EKGC P V
Sbjct: 272 LGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAI 331
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
++ AL K+I EAL+V +M DC PD + Y+SLI L K R + E+ +DM+
Sbjct: 332 CNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDME 391
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++G +PN TY ++ S + E +L++ME + C+ + + Y +LK+
Sbjct: 392 QKGCLPNARTYGYLLKST---KKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYEL 448
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
L L M +N + D TY ++ GL + G+++ A S+F++M G+VP T
Sbjct: 449 KLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRT 503
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 192 bits (489), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 217/438 (49%), Gaps = 8/438 (1%)
Query: 73 VESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQ 132
VES N++ S V S + +V+++ K++ + + + L + +S+ L+ +
Sbjct: 107 VESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVE 166
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
L RF + PAF FF WA + G+ H YN+M+ +L K+++F M +++EM
Sbjct: 167 VLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMG--TK 224
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
G +++ T + M+ AV F MKKY + ++ L+D+L + + A
Sbjct: 225 GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 284
Query: 253 KVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+F + K+ + + +L++GWC+ R + +A + +M QG PD+V++ +E
Sbjct: 285 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLL 344
Query: 313 REKDFRKVDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
R RK D +K M+ KG P+V +YTI++ K + A++ ++ M P
Sbjct: 345 RS---RKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQP 401
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D + Y+ LI ++ E+ ++M+++G P+ TYN +I + E+A ++
Sbjct: 402 DAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIY 461
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
KM ++ +P T+ ++K + ++ + M K + D +Y L+RGLI
Sbjct: 462 NKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGE 521
Query: 490 GKLELACSFFEEMISKGI 507
GK AC + EEM+ KG+
Sbjct: 522 GKSREACRYLEEMLDKGM 539
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 3/278 (1%)
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
S+ +N ++ KTR+ + ++EM +G + ++T ++ + K+ +K +
Sbjct: 195 SRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFE 253
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
M++ K V T ++ +LG+AK EA +++K+K + P+ Y+ L+ +
Sbjct: 254 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVR 312
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ +A I+ DM QG+ P+++ +N M+ ++ +A+KL M+ P+ +Y
Sbjct: 313 NLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYT 372
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
+++ C++ M+ M + + DA Y L+ G KL+ +EM K
Sbjct: 373 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 432
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERI-NKLLAHAKE 542
G P TY L + + +++ RI NK++ + E
Sbjct: 433 GHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIE 470
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ + ++ L+R + DA++ F MK G + R+ ++++ K +S+E A + F
Sbjct: 333 IVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 392
Query: 257 EFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ D + + ++ LI G+ +K+D + +KEM ++G PD +Y I+ +K
Sbjct: 393 DMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK 452
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+M + +PS+ T+ ++M + A+ V+E+M PD + Y+
Sbjct: 453 MPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYT 512
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
LI L G+ ++A E+M +G+ ++ YN
Sbjct: 513 VLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 547
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 112/423 (26%), Positives = 211/423 (49%), Gaps = 8/423 (1%)
Query: 88 VLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGF 147
V S + +V+++ K++ + + + L V +S+ L+ + L RF + PAF F
Sbjct: 131 VDSSTNPEEVERVCKVIDELFALDRNMEAVLDEMKVELSHDLIVKVLERFRHARKPAFRF 190
Query: 148 FTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRL 207
F WA + G+ H YN+M+ +L K+++F M +++EM G +++ T + M+
Sbjct: 191 FCWAAEKQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMG--TKGLLTMETFTIAMKAF 248
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ 267
AV F MKKY + ++ L+D+L + + A +F + K+ +
Sbjct: 249 AAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLKERFTPNMM 308
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK-- 325
+ +L++GWC+ R + +A + +M QG PD+V++ +E R RK D +K
Sbjct: 309 TYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRS---RKKSDAIKLF 365
Query: 326 -EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
M+ KG P+V +YTI++ K + A++ ++ M PD + Y+ LI
Sbjct: 366 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQ 425
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
++ E+ ++M+++G P+ TYN +I + E+A ++ KM ++ +P T+
Sbjct: 426 KKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEPSIHTF 485
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
++K + ++ + + M K + D +Y L+RGLI GK AC + EEM+
Sbjct: 486 NMIMKSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYLEEMLD 545
Query: 505 KGI 507
KG+
Sbjct: 546 KGM 548
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/278 (23%), Positives = 132/278 (47%), Gaps = 3/278 (1%)
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
S+ +N ++ KTR+ + ++EM +G + ++T ++ + K+ +K +
Sbjct: 204 SRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFE 262
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
M++ K V T ++ +LG+AK EA +++K+K + P+ Y+ L+ +
Sbjct: 263 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVR 321
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ +A I+ DM QG+ P+++ +N M+ ++ +A+KL M+ P+ +Y
Sbjct: 322 NLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYT 381
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
+++ C++ M+ M + + DA Y L+ G KL+ +EM K
Sbjct: 382 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 441
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERI-NKLLAHAKE 542
G P TY L + + +++ RI NK++ + E
Sbjct: 442 GHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIE 479
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ + ++ L+R + DA++ F MK G + R+ ++++ K +S+E A + F
Sbjct: 342 IVAHNVMLEGLLRSRKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFD 401
Query: 257 EFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ D + + ++ LI G+ +K+D + +KEM ++G PD +Y I+ +K
Sbjct: 402 DMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQK 461
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+M + +PS+ T+ ++M + A+ V+++M PD + Y+
Sbjct: 462 MPEHATRIYNKMIQNEIEPSIHTFNMIMKSYFMARNYEMGSAVWDEMIKKGICPDDNSYT 521
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
LI L G+ ++A E+M +G+ ++ YN
Sbjct: 522 VLIRGLIGEGKSREACRYLEEMLDKGMKTPLIDYN 556
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 192 bits (487), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 207/412 (50%), Gaps = 2/412 (0%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
+V ++ +++ + + + L C V +S++LV L RF + PAF FF WA +
Sbjct: 204 EVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKA 263
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ H YN M+ VLG++++F M ++ EM E G +++ T S ++
Sbjct: 264 GFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGE--KGLLTMETFSIAIKAFAAAKERKK 321
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
AV F MK+Y + ++ L+D L + + A +F + +D + + + +L++G
Sbjct: 322 AVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNG 381
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
WC+ + + +A + EM +GF PD++++ +E + K + M+ KG P+
Sbjct: 382 WCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPN 441
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V TYTI++ L K ++ EA++ +++M C PD + Y+ LI ++ + +
Sbjct: 442 VRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLK 501
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+MK++G + TYN +I R ++A+++ +KM ++ + TY ++K +
Sbjct: 502 EMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTR 561
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
++ + M + D +Y + GLI G+ E AC + EEMI KG+
Sbjct: 562 NYEMGCAVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGM 613
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 138/294 (46%), Gaps = 1/294 (0%)
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
+K G ++R + +M L + E + E + L+ + F+I I + ++
Sbjct: 261 QKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAAKERK 320
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A + M + F V + C +++ R K ++ ++++++ P++ TYT+++
Sbjct: 321 KAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR-FTPNLRTYTVLL 379
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ + K + EA + + +M PD + +++ L K + DA ++FE MK +G
Sbjct: 380 NGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPS 439
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
PNV TY +I C + + + A++ +M + C+PD Y L+ +K+M + L
Sbjct: 440 PNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYAL 499
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M + D TY +L++ + + A +++MI GI TY M+
Sbjct: 500 LKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMM 553
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 129/282 (45%), Gaps = 2/282 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+S+ +N ++ +TR+ + + EM ++G + +++ I+ + K+ +K
Sbjct: 268 NSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLL-TMETFSIAIKAFAAAKERKKAVGVF 326
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+ M+ V T ++ LG+AK EA ++EK++ D P+ Y+ L+ +
Sbjct: 327 ELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLE-DRFTPNLRTYTVLLNGWCRI 385
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
+ +A + +M +G P+++ ++TM+ ++ +A+KL + M+ P+ TY
Sbjct: 386 KNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTY 445
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L++ C++ +M+ M + DA Y L+ G K++ + +EM
Sbjct: 446 TILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKE 505
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
KG TY L + + +++ + RI K + Q T
Sbjct: 506 KGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTL 547
Score = 42.4 bits (98), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 76/175 (43%), Gaps = 3/175 (1%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
MK+ G D R + L+ + + A +++ + ++ I + +N+++ + TR
Sbjct: 503 MKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRN 562
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +EM ++G PD SY FI R + L+EM EKG K + Y
Sbjct: 563 YEMGCAVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRYLEEMIEKGMKAPQLDYNK 622
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+A + + ++ KMK + ++ ++ ++ K RVK + + D
Sbjct: 623 FAADFSRAGKPDILEELARKMKFEGKFEVSNVFARWAEMMKK--RVKRRDPVKSD 675
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 191 bits (486), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 197/408 (48%), Gaps = 5/408 (1%)
Query: 125 VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV 184
+ +V + L++ ++ A FFTWA Y H P Y M+D+LG+ KK LM +L
Sbjct: 110 IDEDVVLKVLQKQRSNWQVALLFFTWAAGLPTYEHGPRTYIEMLDILGRMKKVRLMRQLF 169
Query: 185 KEMDELNNGYVSLATM-STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
E+ E G V M + ++ R + +A+E F YG E D +L+ +L
Sbjct: 170 DEIPEQRRGLVVTNRMFAVLLNRYAGAHKVQEAIEIFYKRNDYGFEVDLVGFQILLMSLC 229
Query: 244 KGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
+ VE A +FL+ KD P + +NI+++GWC + DA++ E+ PD+ +
Sbjct: 230 RYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLPDAKRVWNEIIASKLKPDLFT 289
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y FI + M EKG P V ++ L K+I EALK++ +M
Sbjct: 290 YGTFINALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALKIFGEMN 349
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
C D + Y++LI K R + E+ +DM+K+G PN +TY ++ + +
Sbjct: 350 DRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILKTT---EKPR 406
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
+ + L+Q+MEE CK D +TY +L + K K + + M +N D ++ +V
Sbjct: 407 DVMNLIQRMEESGCKLDSDTYNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTIMV 466
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
GL G+L+ A ++ M S+G+ P T ++L + + K+ G E
Sbjct: 467 HGLHSQGQLDQALQYYTTMKSRGMTPEPRT-RILVKAIHIKKGGPETE 513
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 202/418 (48%), Gaps = 6/418 (1%)
Query: 118 LKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKF 177
L+ CG + S +V L R N A F WA Q GY ++M+ +L K ++F
Sbjct: 104 LERCGATASEPVVVAVLDRLRNSCAAAHAAFRWASAQPGYAPGRHACHSMLAILAKHRRF 163
Query: 178 CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
L+ +M + S A + ++RR AV AFR + G
Sbjct: 164 DDARALLDQMRR--SSLASPAAVMLLIRRYCAARDVAGAVAAFRALPNLGFRPGVAEFHG 221
Query: 238 LMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCK-TRKVDDAQKAMKEMFQQG 296
L+ L + +V+ A + L + P ++ FN++++GWC R V +A++ M +G
Sbjct: 222 LLTALCRYKNVQDAEHLLLSSEKEFPFETKSFNVVLNGWCNMVRSVREAKRFWNAMEIKG 281
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
DVVSY I + + V M+E G P Y V++AL K + +NEA
Sbjct: 282 IKRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVIPDRKIYNAVVYALAKGQCVNEAK 341
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ M+ PDT+ ++SLI L KA +V++A ++ +DM +G+ P+V T++ ++
Sbjct: 342 ALVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRGLSPSVRTFHALLD-- 399
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
ARS E LL KM+E C P+ +T+ L++ CR ++ + L + M N +S D
Sbjct: 400 VARSPIE-VFDLLDKMKELQCDPEMDTFIMLIRKFCRWRQHDSVEKLWSAMPANGLSPDR 458
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
Y L+ GL +G+LE + ++EEM +KG P T +M++ L + L A +
Sbjct: 459 SAYIVLIHGLFLNGRLEESAKYYEEMKAKGFPPEKKTEEMIQAWLSGRELAKASASVG 516
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 120/436 (27%), Positives = 210/436 (48%), Gaps = 6/436 (1%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
+D++ +IL D + +AL + +V + L++ ++ A FF WA
Sbjct: 83 IDQVLRILKSSDGDTD-LGKALHRFAGEMDEDVVLRVLQKQRSNWQVALLFFNWAAGLPA 141
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDD 215
Y H P Y M+D+LG+ KK LM +L E+ E G V + T + ++ R + +
Sbjct: 142 YAHGPRTYTEMLDILGRMKKVKLMTQLFDEIPEERRGLVVTNRTFAVLLNRYAGAHKVQE 201
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
A+E F K YG E D +L+ +L + VE A +FL+ KD P + +NI+++G
Sbjct: 202 AIEMFYKRKDYGFEVDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNG 261
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
WC + DA++ ++ PD+ +Y FI + M EKG P
Sbjct: 262 WCVKGSLPDAKRIWNQIIASKLKPDLFTYGTFINSLTKAGKLSTAVKLFTSMWEKGINPD 321
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V ++ L K+I EAL ++ +M C D + Y++LI K R + E+ +
Sbjct: 322 VAICNCIIDQLCFKKKIPEALDIFREMTDRGCQADVATYNTLIKYFCKIRRTEKVYELLD 381
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
DM+ +G PN +TY+ ++ + + ++ + LLQ+ME+ C+ D +TY +L + K
Sbjct: 382 DMENKGCSPNNMTYSYILKTT---EKPKDVIHLLQRMEKSGCRLDSDTYNLILNLYVSMK 438
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ + M +N D ++ +V GL G+L+ A ++ M S+G+ P T +
Sbjct: 439 YENGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGRLDQALQYYTTMKSRGMTPEPRT-R 497
Query: 516 MLEEKLEKKRLGNAKE 531
+L + + K+ G A E
Sbjct: 498 ILVKAIHMKKDGPAVE 513
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 226/430 (52%), Gaps = 7/430 (1%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRR--FSN-DLTPAFGFFTWAK 152
DV+ + +I++ S + ++L G+ +SN L+++ L+R FS+ + A FF +
Sbjct: 38 DVEVVYRIITSS-SSVQNLKQSLTSTGIFLSNDLIDKVLKRVRFSHGNPLQALEFFYYTD 96
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ G+ HTP +T++ +LG+S+KF +W+++ +M + +S TM ++ R+ +
Sbjct: 97 NRKGFYHTPYSLDTILYILGRSRKFDHIWDVLIKMKRKDRFLISPRTMQIVLARVAKLCS 156
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNIL 272
VE+FR KK+ DT + L+ TL + S+ A V+ K + Q FNIL
Sbjct: 157 VRQTVESFRKFKKFVSVLDTTCFNALLRTLCQEKSMTDARNVYHRLKKEFKPNLQTFNIL 216
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+ GW ++ ++A+ +EM + G PDVVSY I+ YC++++ K +++M+E+
Sbjct: 217 LSGW---KQSEEAELFFEEMRELGIKPDVVSYNSLIDVYCKDREMEKAYKVVEKMREEDI 273
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P VITYT ++ LG Q ++A + +MK C PD + Y+++I A R+ DA+
Sbjct: 274 SPDVITYTSIIGGLGLVGQPDKARDILNEMKEYGCYPDVAAYNAVIRNYCIAKRLGDASN 333
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ ++M +G+ PN TYN ++ N+ L ++M E C P+ ++ L+++
Sbjct: 334 LMDEMASKGLSPNATTYNLFFRVFYWSNDLRNSWSLYRRMMESGCLPNTQSCMFLIRLFR 393
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ +++++ L M + L L + GKL A F +MI KG P +
Sbjct: 394 KHEKVEMALTLWNDMVEKGFGSYILVSDVLFDLLCDMGKLVEAEKCFLQMIEKGHKPSNV 453
Query: 513 TYKMLEEKLE 522
+++ ++ +E
Sbjct: 454 SFRRIKVLME 463
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 206/411 (50%), Gaps = 9/411 (2%)
Query: 104 LSKQYQ--SPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAK---TQTGYM 158
L K Y+ S ++ AL C +S+++ LV L+R +D PA+ FF WA ++GY
Sbjct: 93 LLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGXESGYS 152
Query: 159 HTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
++N ++D+LG+ ++F M +L EM + G + T ++ R + ++AV+
Sbjct: 153 PGCGVHNEILDILGRMRRFHEMTQLFDEMSK-RKGLXNERTFGVLLNRYAAAHKTEEAVK 211
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCK 278
F K G E D A L+ +L + VE A +F K+ P + N++++GWC
Sbjct: 212 IFYKRKGLGFELDLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWCV 271
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ +A++ ++ PD +Y FI + + M EKGC P V
Sbjct: 272 LGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAI 331
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
++ AL K+I EAL+V +M DC PD + Y+SLI L K R + E+ +DM+
Sbjct: 332 CNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDME 391
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++G +PN TY ++ S + E +L++ME + C+ + + Y +LK+
Sbjct: 392 QKGCLPNARTYGYLLKST---KKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYEL 448
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
L L M +N + D TY ++ GL + G+++ A S+F++M G+VP
Sbjct: 449 KLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVP 499
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 195/391 (49%), Gaps = 5/391 (1%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKTQ-TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
+LV L+R N A FF + Y+H ++ +D+ + +W L+
Sbjct: 57 NLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHR 116
Query: 187 MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
M L G S T + + R G+ D AV+ F M ++G +D + + ++D L K
Sbjct: 117 MRSLRIG-PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSK 175
Query: 247 SVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
VE AY++F + + + +N++++GWC ++ A + +KEM ++G +P++ +Y
Sbjct: 176 RVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
++ + R R + EM+++ C+ V+TYT V+H G A +I A V+++M +
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
LP + Y+++I +L K V++A +FE+M ++G PNV TYN +I E
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+L+Q+ME + C+P+ +TY +++ ++ L M D + TY L+ G+
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Query: 487 I---ESGKLELACSFFEEMISKGIVPYHSTY 514
S + +A EM+ +G +P T+
Sbjct: 416 FVRKRSEDMVVAGKLLLEMVERGFIPRKFTF 446
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 119/253 (47%), Gaps = 1/253 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
S + F I+ + K D A K M + G D+ S+ ++ C+ K K +
Sbjct: 125 SPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELF 184
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+ ++ + +V TY ++++ K+ +AL+V ++M P+ + Y++++ +A
Sbjct: 185 RALRGRFSVDTV-TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRA 243
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G+++ A E F +MKK+ +V+TY T++ E + A + +M + P TY
Sbjct: 244 GQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATY 303
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
++++ C+K ++ + M + + TY L+RGL +G+ + M +
Sbjct: 304 NAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQRMEN 363
Query: 505 KGIVPYHSTYKML 517
+G P TY M+
Sbjct: 364 EGCEPNFQTYNMM 376
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D S+ I+ R V + M+ PS T+ IV A + ++A+K++
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
M C D + +++++ +L K+ RV+ A E+F ++ + V V TYN +++ C
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILNGWCLI 208
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
AL++L++M E P+ TY +LK R +++ M K D +D TY
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
++V G +G+++ A + F+EMI +G++P +TY + + L KK
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 122/431 (28%), Positives = 221/431 (51%), Gaps = 11/431 (2%)
Query: 96 DVDKISKILSKQYQSPDKVVEA-LKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
D + I +ILS +P V+A L S LV + L + SN A FF WA+ Q
Sbjct: 57 DAEAICRILS---TTPASTVDACLAAVPAKPSPELVLEVLNKLSNAGVLALSFFRWAEKQ 113
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
+ + HT E ++ +++ LGK ++F ++W LV +M + ++ T S + RR R +
Sbjct: 114 SEFKHTTEAFHALIEALGKIRQFKMIWTLVNDMKQ--RKLLTSDTFSLVARRYARARKAK 171
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNIL 272
+A++ F M+ YG++ + L+D L K SVE A++VF + + + L I + IL
Sbjct: 172 EAIKTFEKMEHYGLKPHVSDFNKLVDVLCKSKSVEEAHEVFDKMRK-LRLDPDIKSYTIL 230
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+ GW + + + + +EM +GF DVV+Y + +C+ K F + EM+ +G
Sbjct: 231 LEGWSQQQNLIKVNEVCREMEDKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHEMKARGV 290
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+PS Y +++ LG K+++EAL+ +E K+ +P+ Y++++ + R+ DA
Sbjct: 291 RPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGFVPEAPTYNAVVGAYCWSLRMDDAYR 350
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME--EDLCKPDCETYAPLLKM 450
+ +MKK G+ PN T++ ++ E A + ++M E C+P TY +++M
Sbjct: 351 MVGEMKKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRM 410
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C ++ + + + M + +++LV L KL+ AC +F+EM+ GI P
Sbjct: 411 FCNEELLDMAVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPP 470
Query: 511 HSTYKMLEEKL 521
+ L+E L
Sbjct: 471 AKMFSTLKEAL 481
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/276 (20%), Positives = 129/276 (46%), Gaps = 8/276 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +++ + + + E+ +EM+ + G+ + + IM + ++D+A+ +
Sbjct: 227 YTILLEGWSQQQNLIKVNEVCREME--DKGFQLDVVAYGIIMNAHCKAKKFDEAIGLYHE 284
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTR 280
MK GV L++ L ++ A + F K +P + +N ++ +C +
Sbjct: 285 MKARGVRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASGFVP-EAPTYNAVVGAYCWSL 343
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ--EKGCKPSVIT 338
++DDA + + EM + G P+ ++ + H + + + + M E GC+PSV T
Sbjct: 344 RMDDAYRMVGEMKKCGIGPNSRTFDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVST 403
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y I++ + ++ A+ V+++MK LP +S+L+ L ++ +A + F++M
Sbjct: 404 YEIMVRMFCNEELLDMAVAVWDEMKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEML 463
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
G+ P ++T+ + E A+ K+++
Sbjct: 464 DVGIRPPAKMFSTLKEALVDAGMEHVAMHFTLKIDK 499
>gi|359487106|ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 571
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/387 (28%), Positives = 210/387 (54%), Gaps = 6/387 (1%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
S +S V QTL ++ND A FF W +TQ G+ HT + YN M+D+LGK +F L+W
Sbjct: 174 TSFDHSTVRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWV 233
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
L++ M Y + T + +R ++A+ A+ +++ + +D + S L+D L
Sbjct: 234 LIQRMKADPVAYPNHVTFRFVFKRYAAAHLVEEAMNAYYRTEEFNL-RDETSYSNLIDAL 292
Query: 243 VKGNSVEHAYKVFL-EFKDCIPLSS-QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
+ V A ++FL E KD + +I+NI++ GW K ++ +EM ++G
Sbjct: 293 CEYKHVIEAEELFLKESKDLVFNDDVKIYNIILRGWFKMGWWKKCREFWEEMDRRGVCKS 352
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+ SY+ +++ C+ + KEM++KG + V+ Y V+ A+G ++ ++ +++V+
Sbjct: 353 LYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFR 412
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+MK C P+ Y+++I +L + GR+++A +F+ M+++G PNV+TY+ C
Sbjct: 413 EMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFF--GCIEK 470
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
++ L+ +M +P +TY L+K R ++ + + M + S DA Y
Sbjct: 471 PKQ-ILRTFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAYN 529
Query: 481 SLVRGLIESGKLELACSFFEEMISKGI 507
+L+ L++ G ++LA + EEM++KG+
Sbjct: 530 ALIDALVQKGMVDLARKYEEEMLAKGL 556
>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 587
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 134/475 (28%), Positives = 231/475 (48%), Gaps = 21/475 (4%)
Query: 79 NEKSRISSRVLSENHETDVDKISKILSKQYQSP-DKVVEALKGCGVSVSNSLVEQTLRRF 137
N K S S N D IS + + SP ++ L G+ + L+ F
Sbjct: 58 NSKPESSQPTFSPN---DFTLISTLFTNPSISPGSSLLTNLTQTGIKPTPPLLHAVFDHF 114
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV----KEMDELNNG 193
++ + WA Q G+ +++++++ L K K+F W LV + D+ +
Sbjct: 115 ASSPKLLHSLYLWALNQPGFKPDSSLFDSVINALAKMKEFDDAWSLVLDRIRRDDDDDEK 174
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMK-KYGVEKDTRALS---VLMDTLVKGNSVE 249
VS+ T + I+RR R G + A+ F K K + +S +L+D+L K S
Sbjct: 175 LVSVGTFAIIIRRYARAGMHKAAIRTFEFAKDKKSIVDSVSEMSLFEILIDSLCKEGSAR 234
Query: 250 HAYKVFLEFKDC----IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
A + L K+ +P S +++NI+++GW + RK+ A++ +EM + P VV+Y
Sbjct: 235 EASEYLLRRKETDLGWVP-SIRVYNIMLNGWFRARKLKHAERLWEEMKNENVRPSVVTYG 293
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
+E YCR + K + + EM ++G KP+ I Y ++ AL +A + EAL + E+
Sbjct: 294 TLVEGYCRMRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERFHVL 353
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS--SACARSEEE 423
P S Y+SL+ KAG ++ A++I + M +G +P TYN S C + +E
Sbjct: 354 QIGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKVDE- 412
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
+ L KM E PD TY +LKM C ++++++ + M MD T L
Sbjct: 413 -GMNLYTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHKGYDMDLATSTMLT 471
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
L + KLE A + FE+MI +GI+P + T++ L +L+K+ + ++ L++
Sbjct: 472 HLLCKMHKLEEAFAEFEDMIRRGIIPQYLTFQKLNVELKKQGMNEMARKLCHLMS 526
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 184/358 (51%), Gaps = 8/358 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFR 221
Y+T++ L K+ K + +K ++ +NG + ST++ L + GR D+A + F
Sbjct: 269 YDTLMAGLCKTGKIDMA---LKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFE 325
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKT 279
M++ E D + LMD L KG+ ++ A +V +E ++C P + ++ LI G CKT
Sbjct: 326 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP-NVITYSSLIDGLCKT 384
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+V DAQ+ K M +G P+VV+Y I +C ++EM GC P +ITY
Sbjct: 385 GQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITY 444
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ L K + EA +++ MK+ C PD YS LI K R+ A +F+DM K
Sbjct: 445 NTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLK 504
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
Q V+P+V+T++T++ C ++A +LL++M C PD TY L+ C+ RM
Sbjct: 505 QAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVE 564
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+L M K + TY +L+ +GK +A EEM+ G+ P TY+ L
Sbjct: 565 ARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSL 622
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 203/398 (51%), Gaps = 5/398 (1%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-S 196
+N L A +F K + G + YN +++ K K + L+KEM E +G +
Sbjct: 139 ANRLPEATTYFAKMKKK-GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE--SGLAPN 195
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T ST++ R + D A + FR M + G + + L+ L + ++ AY++
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255
Query: 257 EFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E ++ + ++ L+ G CKT K+D A K ++ PDVV+Y+ I C+
Sbjct: 256 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ ++M+E C+P V+T+T +M L K ++ EA +V E M+ +C P+ YS
Sbjct: 316 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 375
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
SLI L K G+V+DA E+F+ M +G+ PNV+TYN++I C + ++AL L+++M
Sbjct: 376 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 435
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C PD TY L+ C+ R N L M + D TY+ L+ G + ++++A
Sbjct: 436 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 495
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ F++M+ + ++P T+ L E L + ER+
Sbjct: 496 RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 533
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 201/418 (48%), Gaps = 46/418 (11%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--- 195
+D A FF WA Q G+ H YN + + L ++++ ++K NG+
Sbjct: 2 SDPDAALRFFHWASKQQGFDHNVYTYNRLFEALLRARRIDETCHILK------NGWPPGI 55
Query: 196 --SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG-------------------------- 227
++ T + +++ L + G D A E M++ G
Sbjct: 56 TPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALD 115
Query: 228 ------VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKT 279
EK+ ++++D L K N + A F + K +P + +N+LI+G+CK
Sbjct: 116 YFRSMECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVP-NEWTYNVLINGFCKV 174
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
KV A +KEM + G +P+VV+Y+ I +CR+ ++M E GC P+++TY
Sbjct: 175 HKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTY 234
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ L + ++EA ++ ++M+ PD Y +L+ L K G++ A ++FED
Sbjct: 235 NTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSN 294
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
P+V+ Y+T+I+ C + A KL +KM E+ C+PD T+ L+ C+ R++
Sbjct: 295 GDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQE 354
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+L M + + + TY+SL+ GL ++G++ A F+ MI +GI P TY L
Sbjct: 355 AQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 412
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 177/371 (47%), Gaps = 8/371 (2%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP + Y++++D L K+ + E+ K M + ++ T ++++ D A+
Sbjct: 368 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMI-VRGIEPNVVTYNSLIHGFCMTNGVDSAL 426
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHG 275
M G D + L+D L K A ++F + K C P ++ LI G
Sbjct: 427 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNP-DVITYSCLIGG 485
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+CK ++D A+ +M +Q PDVV+++ +E YC + L+EM C P
Sbjct: 486 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 545
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V TYT ++ K ++ EA +V ++M C P+ Y++LI +AG+ A + E
Sbjct: 546 VYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLE 605
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL-CKPDCETYAPLLKMCCRK 454
+M GV PNV+TY ++I C + E A K+L+++E D CK D Y ++ CR
Sbjct: 606 EMVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRT 665
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM-ISKGIVPYHST 513
RM LL + ++ Y +L+RGL + +L A EEM +S+ P
Sbjct: 666 GRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEA 725
Query: 514 YKMLEEKLEKK 524
Y+ + ++L ++
Sbjct: 726 YEAVIQELARE 736
>gi|242056423|ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 123/443 (27%), Positives = 214/443 (48%), Gaps = 7/443 (1%)
Query: 92 NHETDV--DKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT 149
+H TDV ++ K+L + +AL+ V + ++ L++ ++ A FF
Sbjct: 81 DHLTDVYASEVLKVLKSTSADNADLSDALRRFAVHMDEDIILTVLQKQRSNWQVALAFFN 140
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM-STIMRRLV 208
WA T GY H Y M+D+LG+ KK M +L E+ E V M + ++ R
Sbjct: 141 WAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRVVVVTNKMFAVLLNRYA 200
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
+ +A+E F K YG E D +L+ +L + VE A +F E KD P ++
Sbjct: 201 GAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKS 260
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+NI+++GWC + DAQ+ ++ D+ +Y FI + K+M
Sbjct: 261 WNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTYGTFINALAKNGRISAAVKLFKKMW 320
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E G P V ++ L +I EAL+++ +M C D + Y++LI L K R++
Sbjct: 321 ETGINPDVAICNCIIDQLCFKNRIPEALEIFGEMNDRLCQADVATYNTLIKYLCKKKRME 380
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
E+ +DM+ +G PN TY+ ++ + + ++ + L+Q+ME+ C+ D +TY +L
Sbjct: 381 KVYELLDDMEAKGCSPNNRTYSYVLKTT---EKPKDVIALMQRMEQTGCELDSDTYNLIL 437
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ K K + + M +N D ++ +V GL GKL+ A ++ M S+G++
Sbjct: 438 NLYTNWKYEKGVQQVWDEMERNGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMI 497
Query: 509 PYHSTYKMLEEKLEKKRLGNAKE 531
P T K+L + + K+ G A E
Sbjct: 498 PEPRT-KILVKAMHMKKDGAATE 519
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 118/405 (29%), Positives = 195/405 (48%), Gaps = 4/405 (0%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMH-TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY 194
R L + FF WA ++ Y H +P YN M+D+ GK ++F L W L+ M N
Sbjct: 125 RHGIPLHQSLAFFNWATSRDDYDHKSPHPYNEMIDLSGKVRQFDLAWHLIDLMKS-RNVE 183
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+S+ T + ++RR VR G +AV F M+ YG D A S+++ L + A
Sbjct: 184 ISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSF 243
Query: 255 FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
F KD ++ L+ GWC+ ++ +A+K KEM G P+V +Y+ I+ CR
Sbjct: 244 FDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRC 303
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ D +M + GC P+ IT+ +M KA + + L+VY +MK C PDT Y
Sbjct: 304 GQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITY 363
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ LI + +++A ++ M K+ N T+NT+ + + A ++ KM E
Sbjct: 364 NFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMME 423
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C+P+ TY L++M K ++ + M +V + TY LV G
Sbjct: 424 AKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYRLLVTMFCGMGHWNN 483
Query: 495 ACSFFEEMI-SKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLL 537
A F+EM+ K + P S Y+M+ +L + +L +E + K++
Sbjct: 484 AYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMI 528
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 124/277 (44%), Gaps = 1/277 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
S +N +I K R+ D A + M + + ++T I Y R +
Sbjct: 150 SPHPYNEMIDLSGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCF 209
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
M++ GC P I ++IV+ L + ++ +EA ++ +K D PD Y++L+ +A
Sbjct: 210 NRMEDYGCVPDKIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRA 268
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G + +A ++F++MK G+ PNV TY+ +I + C + A + M + C P+ T+
Sbjct: 269 GEISEAEKVFKEMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+++ + R + + + M K D TY L+ LE A MI
Sbjct: 329 NNLMRVHVKAGRTEKVLQVYNQMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIK 388
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAK 541
K ST+ + +EKKR N R+ + AK
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK 425
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 122/248 (49%), Gaps = 7/248 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ ++D L + + ++ +M L++G A T + +MR V+ GR + ++ +
Sbjct: 293 YSIVIDALCRCGQISRAHDVFADM--LDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYNQ 350
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
MKK G E DT + L++ + ++E+A KV K C +++ FN + K R
Sbjct: 351 MKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKC-EVNASTFNTIFRYIEKKR 409
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V+ A + +M + P+ V+Y + + K V KEM +K +P+V TY
Sbjct: 410 DVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYR 469
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCL-PDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+++ N A K++++M + CL P S Y ++ L +AG++K E+ E M +
Sbjct: 470 LLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQ 529
Query: 400 QGVVPNVL 407
+G+V L
Sbjct: 530 KGLVARPL 537
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 204/408 (50%), Gaps = 6/408 (1%)
Query: 111 PDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
P + +L G + + LV++ L+R A FF + Y H+ ++ +D+
Sbjct: 62 PKSLRGSLHGLQLQFTPELVDKVLKRLWFHGPKALQFFKHLEYHPSYAHSASSFDHAIDI 121
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
G+ + + +W LV M G S T + I R V G+ D A++ F M+++G +
Sbjct: 122 AGRMRDYKTVWALVARMRARRIGPSS-KTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQ 180
Query: 231 DTRALSVLMDTLVKGNSVEHAYK-VFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
D + + ++D L K VE AY +F + +NI+ +GWC ++ A + +
Sbjct: 181 DLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVL 240
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
KEM ++G +P + +Y ++ Y R ++ + +M+E+ + V+TYT ++H G
Sbjct: 241 KEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVV 300
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+I A KV+ +M + LP T+ Y+++I +L K V++A +FE+M K+G VPN+ TY
Sbjct: 301 GEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTY 360
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N +I + A++ +++M+ D C+P+ +TY ++ C ++ + M +
Sbjct: 361 NVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEKGLSMFEKMGQ 420
Query: 470 NDVSMDAGTYASLVRGLI---ESGKLELACSFFEEMISKGIVPYHSTY 514
+ + TY L+ + +S L +A EM+ +G +P T+
Sbjct: 421 GSLP-NLDTYNVLISAMFVRKKSEDLVVAGKLLLEMVDRGFIPRKFTF 467
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 119/252 (47%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
SS+ F I+ + K D A K M + G D+ S+ ++ C+ K + L
Sbjct: 146 SSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNL 205
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
++ K V++Y I+ + K+ +AL+V ++M P + Y+ L+ +A
Sbjct: 206 FKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRA 265
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G++K+A E F MK++ V +V+TY TM+ E + A K+ +M + P TY
Sbjct: 266 GQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATY 325
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
++++ C+K ++ + M K + TY ++RGL +G ++ A F E M +
Sbjct: 326 NAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKT 385
Query: 505 KGIVPYHSTYKM 516
G P TY +
Sbjct: 386 DGCEPNVQTYNV 397
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 117/233 (50%), Gaps = 2/233 (0%)
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQI 352
+ ++ S+ I+ R +D++ V + M+ + PS T+ I+ A +
Sbjct: 104 YHPSYAHSASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIAERFVAAGKP 163
Query: 353 NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA-NEIFEDMKKQGVVPNVLTYNT 411
+ A+KV+ M+ C D +++++ IL K+ RV+ A N +F+ ++ + +V++YN
Sbjct: 164 DRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGK-FKADVVSYNI 222
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+ + C AL++L++M E P TY LLK R ++K M + +
Sbjct: 223 IANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKERE 282
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
V +D TY ++V G G+++ A F EM+ +GI+P +TY + + L KK
Sbjct: 283 VEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKK 335
>gi|356546852|ref|XP_003541836.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Glycine max]
Length = 481
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 120/430 (27%), Positives = 220/430 (51%), Gaps = 9/430 (2%)
Query: 93 HETDVDKISKILSKQYQSP-DKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWA 151
H I +L + P +++ AL CG +++ LV LRR +D PA FF WA
Sbjct: 32 HSCPATFIQNLLKFRRDKPTEQLYRALDQCGFDLNHDLVLDVLRRHRSDWRPAHVFFNWA 91
Query: 152 -KTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
KT TGY + ++ N +VD+LGK ++F + +++ EM + + A +T++RR V
Sbjct: 92 SKTTTGYQPSSDVCNEIVDILGKMQRFQELHQVLDEMSKREE-LLDEAVFATLVRRFVGA 150
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIF 269
+ D+A++ F K++G+E ++ A L+ L + VE A +F K + +++
Sbjct: 151 HKVDEAIQLFYRRKEFGLELNSEAFRTLLMWLCRYKHVEDAEALFHNSVKKGLRADIKMW 210
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N++++GWC +A++ +++ PD+ +Y FI+ ++ + M +
Sbjct: 211 NVILNGWCVLGNSHEAKRVWRDIVASPCKPDIFTYATFIKALTKKGKLGTALKLFRGMWD 270
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
KG KP V+ ++ AL K+I EAL+++ M C P+ + Y+SLI + K R+K
Sbjct: 271 KGGKPDVVICNCIIDALCFKKRIPEALEIFCDMSERGCEPNVATYNSLIKYMCKIQRMKK 330
Query: 390 ANEIFEDM--KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
E+ ++M KK +PN +TY ++ S E ++L++ME + C + + Y +
Sbjct: 331 VYELVDEMERKKGSCLPNAVTYCYLLKSL---KEPGEVCRVLERMERNGCGMNDDVYNMV 387
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
L++ + + M +N D +Y ++ E G+++ A + EEMISKG+
Sbjct: 388 LRLYMKWDDGDGVRKTWEEMERNGWGPDRRSYTIMIHENFEKGRVKDAVRYLEEMISKGM 447
Query: 508 VPYHSTYKML 517
VP T K++
Sbjct: 448 VPERRTEKLV 457
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 125/448 (27%), Positives = 230/448 (51%), Gaps = 18/448 (4%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRR--FSN-DLTPAFGFFTWAK 152
DV+ + +I+S S + ++LK GV +SN L+++ L+R FS+ + A FF +
Sbjct: 59 DVETVFRIVSSA-SSTRNLKQSLKSSGVFLSNDLIDKVLKRVRFSHGNPFQALAFFNYTN 117
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ G+ HTP +TM+ +LG+S++F +WEL+ +M + +S ++ ++ R+ +
Sbjct: 118 KRKGFYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPRSVQVVLGRIAKVCS 177
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNIL 272
VE+FR KK E DT + L+ TL + S+ A V+ K + FNIL
Sbjct: 178 VKQTVESFRKFKKLVPEFDTACFNALLRTLCQEKSMRDARNVYHSLKHDFRPDLRTFNIL 237
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+ GW + ++A+ EM + G PDVVSY C I+ YC+ ++ + + +M+++
Sbjct: 238 LSGW---KSAEEAEGFFDEMREMGVEPDVVSYNCLIDVYCKGREIERAYKVIDKMRDEQI 294
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P VI+YT ++ LG Q ++A V ++MK C PD + Y++ I A R+ DA+
Sbjct: 295 SPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAIRNFCIANRLGDADG 354
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ ++M +G+ PN TYN ++ + L Q+M++ C P+ ++ L ++
Sbjct: 355 LMDEMVGKGLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTGCLPNTQSCMFLTRLFR 414
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYA----SLVRGLIESGKLELACSFFEEMISKGIV 508
R+++++ + ++ + V G+Y L L + GKL +MI KG
Sbjct: 415 RQEKVE----MALELWNDMVEKGFGSYILVSDVLFDMLCDMGKLVEVEKCCLQMIEKGHK 470
Query: 509 PYHSTYKMLEEKLEKKRLGNAKERINKL 536
P + +++ ++ +E L N E + L
Sbjct: 471 PSNVSFRRIKVLME---LANKHEALQNL 495
>gi|413952128|gb|AFW84777.1| hypothetical protein ZEAMMB73_772209 [Zea mays]
Length = 519
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 124/417 (29%), Positives = 205/417 (49%), Gaps = 6/417 (1%)
Query: 114 VVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGK 173
AL GCG S LV +L R N A F WA Q GY ++M+D+L K
Sbjct: 89 AARALDGCGAEASEPLVVASLARLRNSCAAAHAAFRWAAAQPGYAPGRRACHSMLDILAK 148
Query: 174 SKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR 233
++F L+ EM + S A + ++RR AV AFR + +G
Sbjct: 149 HRRFDAARALLDEMRRAST--ASPAAVLLLVRRHCAARDVAGAVAAFRALPSFGFHTGAA 206
Query: 234 ALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTR-KVDDAQKAMKEM 292
L+ L + +V+ A + + ++ P ++ FNI+++GWC V +A++ M
Sbjct: 207 EFHGLLSALCRYKNVQDAENLLISWQKEFPFETKSFNIVLNGWCNIVCSVREAKRFWSSM 266
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQI 352
++G + DV+SY I + + V M E G P Y ++ AL K + +
Sbjct: 267 ERKGIARDVLSYGSMISCFSKAGSLDSVMKLFNRMNEAGVAPDRKVYNAIVFALAKGRCV 326
Query: 353 NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
EA + M+ PDT+ ++SLI L KA + ++A E+F+ M ++ + P+V T++ +
Sbjct: 327 KEAKMLVRSMEEKQVAPDTATFNSLIGPLCKARQFQEAMEMFDAMLQRKLSPSVRTFHAL 386
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
++ AR+ E LL KM++ C+P+ +TY L++ CR + + + L + M N +
Sbjct: 387 LN--VARNSTE-VFDLLDKMKQLRCEPEMDTYIMLIRKFCRWREHESVEKLWSAMPANGL 443
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNA 529
S D Y L+ GL +G+LE A ++EEM SKG +P T +M+ LE + L A
Sbjct: 444 SPDRSAYIVLIHGLFLNGRLEEAARYYEEMKSKGFLPEKKTEEMVMAWLEGRELAKA 500
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 117/430 (27%), Positives = 211/430 (49%), Gaps = 9/430 (2%)
Query: 90 SENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT 149
S H +D I+K++ + P V EAL + + LV + ++R N A FF
Sbjct: 35 SVEHPSDAT-IAKLVLES--DPRTVSEALTKPTIQWTPDLVNKVMKRLWNHGPKALQFFK 91
Query: 150 -WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLV 208
+ Y H+P ++ VD+ + + F W LV M L G S T++ + R
Sbjct: 92 HLDRHHPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLG-PSPKTLAILAERYA 150
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
G+ AV F M ++G+ +D + + L+D L K VE A+ + +
Sbjct: 151 SNGKPHRAVRTFLSMAEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSRFRPDTVT 210
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+NIL +G+C ++ A + +KEM Q+G P +V+Y ++ Y R ++ + EM+
Sbjct: 211 YNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMK 270
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
++ C+ V+TYT V+H G A + +A +V+ +M + +P+ + Y++LI +L K V+
Sbjct: 271 KRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKKDSVE 330
Query: 389 DANEIFEDMKKQGV-VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+A +FE+M ++GV VPNV+TYN +I C + E AL +++M E + +TY +
Sbjct: 331 NAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQTYNVV 390
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI---ESGKLELACSFFEEMIS 504
++ C ++ + M + TY L+ + +S L +A +M+
Sbjct: 391 IRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMDMVD 450
Query: 505 KGIVPYHSTY 514
+G +P T+
Sbjct: 451 RGFLPRKFTF 460
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 103/222 (46%), Gaps = 1/222 (0%)
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
S+ ++ R +DF + M+ PS T I+ + + A++ + M
Sbjct: 106 SFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASNGKPHRAVRTFLSM 165
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
D +++L+ IL K+ RV+ A+ + + + + P+ +TYN + + C
Sbjct: 166 AEHGIRQDLHSFNTLLDILCKSKRVETAHSLLKTLTSR-FRPDTVTYNILANGYCLIKRT 224
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
AL++L++M + +P TY +LK R ++K M K +D TY ++
Sbjct: 225 PMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVTYTTV 284
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ G +G ++ A F EM+ +G+VP +TY L + L KK
Sbjct: 285 IHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCKK 326
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 114/409 (27%), Positives = 202/409 (49%), Gaps = 17/409 (4%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
+DV+K +IL K + K+ AL GV + L+E+ L R + + FF WA Q
Sbjct: 74 SDVEKSYRILRKFHSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYRFFVWAAKQ 133
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
Y H+ E+Y +MV +L K ++F +W L++EM + N + +++R
Sbjct: 134 PRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRFASADMVK 193
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
A+E M K+G E D L+D L K SV+ A K+F + +
Sbjct: 194 KAIEVLDEMPKFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR--------------- 238
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
+ K+ +A+ + +M + GF PD+V YT + Y D L++M+ +G +P
Sbjct: 239 --MRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMADAYDLLRDMRRRGFEP 296
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ YT+++ AL K ++ EA+KV+ +M+ +C D Y++L+ K G++ +
Sbjct: 297 NANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFCKWGKIDKCYIVL 356
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+DM K+G++P+ LTY ++ + + E L+L++KM + PD Y ++++ C+
Sbjct: 357 DDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKL 416
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
+K L M +N +S T+ ++ GL G L A F+EM+
Sbjct: 417 GEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEML 465
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/295 (20%), Positives = 113/295 (38%), Gaps = 62/295 (21%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM-RRLVRGGRYDDAVEAFRG 222
Y ++ + K ++L+++M G+ A T++ + L + R ++A++ F
Sbjct: 266 YTNLLSGYANAGKMADAYDLLRDMR--RRGFEPNANCYTVLIQALCKVDRMEEAMKVFVE 323
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE------------------------- 257
M++Y E D + L+ K ++ Y V +
Sbjct: 324 MERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKES 383
Query: 258 FKDCIPLSSQ-----------IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
F++C+ L + I+N++I CK +V +A + EM + G SP V ++
Sbjct: 384 FEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVI 443
Query: 307 FIEHYCREKDFRKVDDTLKEM-----------------------QEKGCKPSVITYTIVM 343
I + + D KEM + C+ +V+++TI +
Sbjct: 444 MINGLASQGCLLEASDHFKEMLLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWI 503
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
HAL EA +M D +P ++ L+ L K + A EI E ++
Sbjct: 504 HALFSKGYEKEACSYCIEMIEMDFMPQPDTFAKLMKGLKKLYNREFAGEITEKVR 558
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 188 bits (478), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 121/436 (27%), Positives = 210/436 (48%), Gaps = 16/436 (3%)
Query: 116 EALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLG--- 172
+ L G+ ++ LV L R + +F FF WA Q Y H P YN M+D+L
Sbjct: 18 KTLDQLGLELTTDLVLNVLGRLHFEEKTSFRFFMWAGHQKNYSHEPCAYNEMIDILTSTK 77
Query: 173 -KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV--E 229
K+++F ++ +++ M N V + + TI+R +Y V+ F K+ V +
Sbjct: 78 YKARQFRIVCDMLDYMKRNNKNVVPVEVLLTILRNYTE--KYLTRVQKFAKKKRIRVKTQ 135
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ A ++L+D L K E A +F K+ + + +N++ GWC+ R K +
Sbjct: 136 PEINAFNLLLDALCKCCLAEDAEGLFKRVKNKVKPDANTYNVMFFGWCRVRNPTRGMKVL 195
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG---CKPSVITYTIVMHAL 346
+EM Q G +PD +Y I+ +CR + + + M+ KG P+ TY I++ AL
Sbjct: 196 EEMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGAL 255
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
+ +++E K+ E M + CLPD S + LI + AG++ +A ++M +G P++
Sbjct: 256 VRNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPDI 315
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+TYN + C E AL+L ++M E C P +T+ L+ M
Sbjct: 316 VTYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWYE 375
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI-VPYHSTYKMLEEKLEKKR 525
M K + D TY ++ GL K+E AC E++++KG+ +PY L ++
Sbjct: 376 MDKRGCAQDVDTYIVMIDGLFGCNKVEDACFLIEDIVNKGMKLPYQKFDSFL---MQLSV 432
Query: 526 LGNAKERINKLLAHAK 541
+GN + I++L H +
Sbjct: 433 IGNIRA-IHRLSEHMR 447
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 114/358 (31%), Positives = 184/358 (51%), Gaps = 8/358 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFR 221
Y+T++ L K+ K + +K ++ +NG + ST++ L + GR D+A + F
Sbjct: 150 YDTLMAGLCKTGKIDMA---LKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFE 206
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKT 279
M++ E D + LMD L KG+ ++ A +V +E ++C P + ++ LI G CKT
Sbjct: 207 KMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTP-NVITYSSLIDGLCKT 265
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+V DAQ+ K M +G P+VV+Y I +C ++EM GC P +ITY
Sbjct: 266 GQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITY 325
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ L K + EA +++ MK+ C PD YS LI K R+ A +F+DM K
Sbjct: 326 NTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLK 385
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
Q V+P+V+T++T++ C ++A +LL++M C PD TY L+ C+ RM
Sbjct: 386 QAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVE 445
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+L M K + TY +L+ +GK +A EEM+ G+ P TY+ L
Sbjct: 446 ARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSL 503
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 117/398 (29%), Positives = 203/398 (51%), Gaps = 5/398 (1%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-S 196
+N L A +F K + G + YN +++ K K + L+KEM E +G +
Sbjct: 20 ANRLPEATTYFAKMKKK-GTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKE--SGLAPN 76
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T ST++ R + D A + FR M + G + + L+ L + ++ AY++
Sbjct: 77 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 136
Query: 257 EFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E ++ + ++ L+ G CKT K+D A K ++ PDVV+Y+ I C+
Sbjct: 137 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTG 196
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ ++M+E C+P V+T+T +M L K ++ EA +V E M+ +C P+ YS
Sbjct: 197 RLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYS 256
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
SLI L K G+V+DA E+F+ M +G+ PNV+TYN++I C + ++AL L+++M
Sbjct: 257 SLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTAT 316
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C PD TY L+ C+ R N L M + D TY+ L+ G + ++++A
Sbjct: 317 GCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMA 376
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ F++M+ + ++P T+ L E L + ER+
Sbjct: 377 RTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERL 414
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/349 (29%), Positives = 177/349 (50%), Gaps = 4/349 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + ++ L + R +A F MKK G + +VL++ K + V AY +
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 256 LEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E K+ + + ++ +IHG+C+ KVD A K ++M + G P++V+Y + CR
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + L EM+E+G +P +Y +M L K +I+ ALKV+E + DC PD Y
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S+LI L K GR+ +A ++FE M++ P+V+T+ ++ C + A ++L+ ME+
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C P+ TY+ L+ C+ +++ + M + + TY SL+ G + ++
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
A EEM + G +P TY L + L K G A E N+L K +
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKT--GRAPE-ANRLFGDMKAK 351
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 90/291 (30%), Positives = 158/291 (54%), Gaps = 3/291 (1%)
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQ 286
EK+ ++++D L K N + A F + K +P + +N+LI+G+CK KV A
Sbjct: 4 EKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVP-NEWTYNVLINGFCKVHKVHRAY 62
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
+KEM + G +P+VV+Y+ I +CR+ ++M E GC P+++TY ++ L
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
+ ++EA ++ ++M+ PD Y +L+ L K G++ A ++FED P+V
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+ Y+T+I+ C + A KL +KM E+ C+PD T+ L+ C+ R++ +L
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M + + + TY+SL+ GL ++G++ A F+ MI +GI P TY L
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSL 293
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 178/371 (47%), Gaps = 8/371 (2%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP + Y++++D L K+ + E+ K M + ++ T ++++ D A+
Sbjct: 249 TPNVITYSSLIDGLCKTGQVRDAQEVFKRMI-VRGIEPNVVTYNSLIHGFCMTNGVDSAL 307
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHG 275
M G D + L+D L K A ++F + K C P ++ LI G
Sbjct: 308 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNP-DVITYSCLIGG 366
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+CK ++D A+ +M +Q PDVV+++ +E YC + L+EM C P
Sbjct: 367 FCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPD 426
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V TYT ++ K ++ EA +V ++M C P+ Y++LI +AG+ A ++ E
Sbjct: 427 VYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLE 486
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL-CKPDCETYAPLLKMCCRK 454
+M GV PNV+TY ++I C + E A K+L+++E D CK D Y ++ CR
Sbjct: 487 EMVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRT 546
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM-ISKGIVPYHST 513
RM LL + ++ Y +L+RGL + +L A EEM +S+ P
Sbjct: 547 GRMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEA 606
Query: 514 YKMLEEKLEKK 524
Y+ + ++L ++
Sbjct: 607 YEAVIQELARE 617
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 102/186 (54%)
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C+ +VIT+TI++ L KA ++ EA + KMK +P+ Y+ LI K +V A
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ ++MK+ G+ PNV+TY+T+I C +++ + A KL ++M E+ C P+ TY LL
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
CR M LL M + + D +Y +L+ GL ++GK+++A FE+ + P
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182
Query: 512 STYKML 517
Y L
Sbjct: 183 VAYSTL 188
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%)
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
+C + ++ +I L KA R+ +A F MKK+G VPN TYN +I+ C + A
Sbjct: 2 ECEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRA 61
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
LL++M+E P+ TY+ ++ CR+ ++ L M +N + TY +L+ G
Sbjct: 62 YLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSG 121
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
L +G ++ A +EM +G+ P +Y L L K
Sbjct: 122 LCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCK 159
>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 187 bits (476), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 120/405 (29%), Positives = 197/405 (48%), Gaps = 12/405 (2%)
Query: 116 EALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLG--- 172
+AL G+ +S LV L R D A FFTWA Q Y H P YN M+D+L
Sbjct: 12 KALGQLGIPLSTPLVTGVLHRLRYDEKIALRFFTWAGHQEDYSHEPCAYNDMMDILSSTR 71
Query: 173 -KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV--E 229
K K+F ++ ++++ M N V + + I+R+ +Y V+ F ++ V +
Sbjct: 72 YKVKQFRIVCDVLEYMKRNNKTTVPVEVLLVILRKYTE--KYLTHVQKFARKRRIRVKTQ 129
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ A ++L+D L K VE A ++ + + + +++ +NI + GWC+ R K +
Sbjct: 130 PEINAFNLLLDALCKCCLVEDAETLYKKMRKTVKPNAETYNIFVFGWCRVRNPTRGMKLL 189
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK---PSVITYTIVMHAL 346
+EM + G PD +Y I+ YC+ + D + M+ KG P+ TY I++ AL
Sbjct: 190 EEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVAL 249
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
+ ++ E K+ M S CLPD + Y +I + G++ +A + E+M + P++
Sbjct: 250 AQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDI 309
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+TYN + C + E+ALKL +M E C P +TY L+ M
Sbjct: 310 VTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQE 369
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI-VPY 510
M D TY+ ++ GL K+E AC EE+I+KGI +PY
Sbjct: 370 MDNRGCRPDIDTYSVMIDGLFNCNKVEDACFLLEEVINKGIKLPY 414
>gi|15239018|ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g11310, mitochondrial; Flags: Precursor
gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis thaliana]
gi|110738090|dbj|BAF00978.1| hypothetical protein [Arabidopsis thaliana]
gi|332004275|gb|AED91658.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 134/465 (28%), Positives = 226/465 (48%), Gaps = 17/465 (3%)
Query: 94 ETDVDKISKILSKQYQSPDKVVE-ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAK 152
+TD+ IS +L P +E AL G+ S LV R S+ F WA+
Sbjct: 67 KTDLSTISNLLENTDVVPGSSLESALDETGIEPSVELVHALFDRLSSSPMLLHSVFKWAE 126
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM---DELNNGYVSLATMSTIMRRLVR 209
+ G+ +P +++++V+ L K+++F + W LV + DE +N VS T ++RR R
Sbjct: 127 MKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSN-LVSADTFIVLIRRYAR 185
Query: 210 GGRYDDAVEAFRGMKKY----GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF------K 259
G A+ AF + Y + R L VL+D L K V A ++LE
Sbjct: 186 AGMVQQAIRAFEFARSYEPVCKSATELRLLEVLLDALCKEGHVREA-SMYLERIGGTMDS 244
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ +P S +IFNIL++GW ++RK+ A+K +EM P VV+Y IE YCR + +
Sbjct: 245 NWVP-SVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVQI 303
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ L+EM+ + + + + ++ LG+A +++EAL + E+ + P Y+SL+
Sbjct: 304 AMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVK 363
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
KAG + A++I + M +GV P TYN ++ E + L K+ E P
Sbjct: 364 NFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP 423
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY +LKM C ++ + + M + D T L+ L LE A F
Sbjct: 424 DRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEEAFEEF 483
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
+ + +GI+P + T+KM++ L K + + +R++ L++ K
Sbjct: 484 DNAVRRGIIPQYITFKMIDNGLRSKGMSDMAKRLSSLMSSLPHSK 528
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 210/435 (48%), Gaps = 2/435 (0%)
Query: 73 VESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQ 132
VES N++ S V S + +V+++ K++ + + + L + +S+ L+ +
Sbjct: 107 VESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVE 166
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
L RF + PAF FF WA + G+ H YN+M+ +L K+++F M +++EM
Sbjct: 167 VLERFRHARKPAFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEMG--TK 224
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
G +++ T + M+ AV F MKKY + ++ L+D+L + + A
Sbjct: 225 GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 284
Query: 253 KVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+F + K+ + + +L++GWC+ R + +A + +M G PD+V++ +E
Sbjct: 285 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL 344
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
R M+ KG P+V +YTI++ K + A++ ++ M PD +
Sbjct: 345 RSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 404
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+ LI ++ E+ ++M+++G P+ TYN +I + E+ ++ KM
Sbjct: 405 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM 464
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
++ +P T+ ++K + ++ + M K + D +Y L+RGLI GK
Sbjct: 465 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 524
Query: 493 ELACSFFEEMISKGI 507
AC + EEM+ KG+
Sbjct: 525 REACRYLEEMLDKGM 539
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 132/279 (47%), Gaps = 3/279 (1%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+S+ +N ++ KTR+ + ++EM +G + ++T ++ + K+ +K
Sbjct: 194 ASRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIF 252
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+ M++ K V T ++ +LG+AK EA +++K+K + P+ Y+ L+ +
Sbjct: 253 ELMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRV 311
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
+ +A I+ DM G+ P+++ +N M+ ++ +A+KL M+ P+ +Y
Sbjct: 312 RNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSY 371
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
+++ C++ M+ M + + DA Y L+ G KL+ +EM
Sbjct: 372 TIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQE 431
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERI-NKLLAHAKE 542
KG P TY L + + +++ RI NK++ + E
Sbjct: 432 KGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 470
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 40/286 (13%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
E N ++D LG++K L E D+L + ++ T + ++ R +A +
Sbjct: 265 ETINCLLDSLGRAK---LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIW 321
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS-QIFNILIHGWCKT 279
M +G++ D A +V+++ L++ A K+F K P + + + I+I +CK
Sbjct: 322 NDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQ 381
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-------- 331
++ A + +M G PD YTC I + +K V + LKEMQEKG
Sbjct: 382 SSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 441
Query: 332 ---------------------------CKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+PS+ T+ ++M + A+ V+++M
Sbjct: 442 NALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIK 501
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
PD + Y+ LI L G+ ++A E+M +G+ ++ YN
Sbjct: 502 KGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 547
>gi|356561955|ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Glycine max]
Length = 622
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 131/457 (28%), Positives = 229/457 (50%), Gaps = 22/457 (4%)
Query: 100 ISKILSKQYQSPDKVVEA-LKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYM 158
IS + + SP + A L G+ +L+ RF + F WA+T+ +
Sbjct: 96 ISNLFADPSLSPGPALHAELDRAGIEPDPALLLAVFDRFGSSPKLLHSLFLWAQTRPAFR 155
Query: 159 HTPEMYNTMVDVLGKSKKFCLMWELV-------KEMDELNNGYVSLATMSTIMRRLVRGG 211
P++++ +V+ L K+++F W+LV E + VS+ T + ++RR R G
Sbjct: 156 PGPKLFDAVVNALAKAREFDAAWKLVLHHAEKDGEEEGEKERLVSVGTFAIMIRRYARAG 215
Query: 212 RYDDAVEA--FRGMKKYGVEKDTRA--LSVLMDTLVKGNSVEHAYKVFLEFKDC----IP 263
A+ F K V+ + L +LMD+L K SV A + FL K+ +P
Sbjct: 216 MSKLAIRTYEFATNNKSIVDSGSEMSLLEILMDSLCKEGSVREASEYFLWKKELDLSWVP 275
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
S +++NI+++GW + RK+ ++ EM ++ P VV+Y +E YCR + K +
Sbjct: 276 -SIRVYNIMLNGWFRLRKLKQGERLWAEM-KENMRPTVVTYGTLVEGYCRMRRVEKALEM 333
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+ +M ++G P+ I Y ++ AL +A + EAL + E+ + P S Y+SL+ K
Sbjct: 334 VGDMTKEGIAPNAIVYNPIIDALAEAGRFKEALGMLERFHVLEIGPTDSTYNSLVKGFCK 393
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMIS--SACARSEEENALKLLQKMEEDLCKPDC 441
AG + A++I + M +G +P+ TYN S C + EE + L K+ + PD
Sbjct: 394 AGDLVGASKILKMMISRGFLPSATTYNYFFRYFSRCRKIEE--GMNLYTKLIQSGYTPDR 451
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+KM C ++++ + + M N MD T LV L + +LE A FE+
Sbjct: 452 LTYHLLVKMLCEEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCKVRRLEEAFVEFED 511
Query: 502 MISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
MI +GIVP + T++ ++ L+K+ + +++ KL++
Sbjct: 512 MIRRGIVPQYLTFQRMKADLKKQGMTEMAQKLCKLMS 548
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/311 (21%), Positives = 123/311 (39%), Gaps = 40/311 (12%)
Query: 147 FFTWAK-TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMR 205
+F W K ++ + +YN M++ + +K L EM E N ++ T T++
Sbjct: 262 YFLWKKELDLSWVPSIRVYNIMLNGWFRLRKLKQGERLWAEMKE--NMRPTVVTYGTLVE 319
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPL 264
R R + A+E M K G+ + + ++D L + + A + F I
Sbjct: 320 GYCRMRRVEKALEMVGDMTKEGIAPNAIVYNPIIDALAEAGRFKEALGMLERFHVLEIGP 379
Query: 265 SSQIFNILIHGWCKT-----------------------------------RKVDDAQKAM 289
+ +N L+ G+CK RK+++
Sbjct: 380 TDSTYNSLVKGFCKAGDLVGASKILKMMISRGFLPSATTYNYFFRYFSRCRKIEEGMNLY 439
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
++ Q G++PD ++Y ++ C E+ KEM+ G + T T+++H L K
Sbjct: 440 TKLIQSGYTPDRLTYHLLVKMLCEEEKLDLAVQVSKEMRHNGYDMDLATSTMLVHLLCKV 499
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL-T 408
+++ EA +E M +P + + L K G + A ++ + M PN+ T
Sbjct: 500 RRLEEAFVEFEDMIRRGIVPQYLTFQRMKADLKKQGMTEMAQKLCKLMSSVPYSPNLPNT 559
Query: 409 YNTMISSACAR 419
Y + A AR
Sbjct: 560 YGEVREDAYAR 570
>gi|449442339|ref|XP_004138939.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Cucumis sativus]
Length = 559
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 206/427 (48%), Gaps = 12/427 (2%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
ET+ DK+ + + + + AL GV ++ LV L R D AF FFTWA
Sbjct: 83 ETNADKLHRAIVDNSYAHHDMEGALDQVGVYLTTDLVADILHRLRFDEKLAFRFFTWAAR 142
Query: 154 QTGYMHTPEMYNTMVDVLG----KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
Q Y H P +YN M+D+L K K+F ++ +L+ M + V + + I+R
Sbjct: 143 QENYSHEPRVYNEMIDILSSTRYKVKQFRIVCDLLDYMKRNDKNTVPVEVLFGILRNYT- 201
Query: 210 GGRYDDAVEAFRGMKKYGVEK--DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ 267
+Y ++ F KK V++ + A ++L+D L K + VE A + + K + +
Sbjct: 202 -DKYLTCLQKFAKKKKVIVKRQPEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDAN 260
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+NI+ GWC+ R + ++EM + GF PD +Y I +C+ ++ + + M
Sbjct: 261 TYNIMFFGWCRVRNPGRGMRVLEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFM 320
Query: 328 QEKGC---KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+ KG P+ TY I++ AL ++ E K E M CLPD S Y +I + A
Sbjct: 321 RTKGSALSSPTAKTYAIMIVALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVA 380
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G+V++A E+M K+G P+++TYN + C ++AL+ +M E C P +TY
Sbjct: 381 GKVQEAYMFLEEMGKKGYPPDIVTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSVQTY 440
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ M + M + + D +Y ++ GL K+ AC EE+++
Sbjct: 441 NMLISMFFEMNDHNGAFQIWLEMDRYGCTRDVDSYCIMIEGLFGCNKVGDACLLLEEVVN 500
Query: 505 KGI-VPY 510
KG+ +P+
Sbjct: 501 KGMKLPF 507
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 15/216 (6%)
Query: 315 KDFRKVDDTLKEMQ--EKGCKPSVITYTIVMHALGK----AKQINEALKVYEKMKSDDCL 368
K FR V D L M+ +K P + + I+ + K ++ + KV K +
Sbjct: 168 KQFRIVCDLLDYMKRNDKNTVPVEVLFGILRNYTDKYLTCLQKFAKKKKVIVKRQ----- 222
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P+ + ++ L+ L K V+DA E K+ + P+ TYN M C +++
Sbjct: 223 PEINAFNLLLDALCKCSLVEDA-EALLKKVKKKLKPDANTYNIMFFGWCRVRNPGRGMRV 281
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD---AGTYASLVRG 485
L++M E PD TY + C+ +K L M ++ A TYA ++
Sbjct: 282 LEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVA 341
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ +G++E F E MI G +P STYK + E +
Sbjct: 342 LVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGI 377
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/435 (25%), Positives = 210/435 (48%), Gaps = 2/435 (0%)
Query: 73 VESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQ 132
VES N++ S V S + +V+++ K++ + + + L + +S+ L+ +
Sbjct: 106 VESECDNDEETGVSCVESSTNPEEVERVCKVIDELFALDRNMEAVLDEMKLDLSHDLIVE 165
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
L RF + PAF FF WA + G+ H YN+M+ +L K+++F M +++EM
Sbjct: 166 VLERFRHARKPAFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEMG--TK 223
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
G +++ T + M+ AV F MKKY + ++ L+D+L + + A
Sbjct: 224 GLLTMETFTIAMKAFAAAKERKKAVGIFELMKKYKFKIGVETINCLLDSLGRAKLGKEAQ 283
Query: 253 KVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+F + K+ + + +L++GWC+ R + +A + +M G PD+V++ +E
Sbjct: 284 VLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLL 343
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
R M+ KG P+V +YTI++ K + A++ ++ M PD +
Sbjct: 344 RSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAA 403
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+ LI ++ E+ ++M+++G P+ TYN +I + E+ ++ KM
Sbjct: 404 VYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKM 463
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
++ +P T+ ++K + ++ + M K + D +Y L+RGLI GK
Sbjct: 464 IQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKS 523
Query: 493 ELACSFFEEMISKGI 507
AC + EEM+ KG+
Sbjct: 524 REACRYLEEMLDKGM 538
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/278 (22%), Positives = 131/278 (47%), Gaps = 3/278 (1%)
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
S+ +N ++ KTR+ + ++EM +G + ++T ++ + K+ +K +
Sbjct: 194 SRTYNSMMSILAKTRQFETMVSVLEEMGTKGLLT-METFTIAMKAFAAAKERKKAVGIFE 252
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
M++ K V T ++ +LG+AK EA +++K+K + P+ Y+ L+ +
Sbjct: 253 LMKKYKFKIGVETINCLLDSLGRAKLGKEAQVLFDKLK-ERFTPNMMTYTVLLNGWCRVR 311
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ +A I+ DM G+ P+++ +N M+ ++ +A+KL M+ P+ +Y
Sbjct: 312 NLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYT 371
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
+++ C++ M+ M + + DA Y L+ G KL+ +EM K
Sbjct: 372 IMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEK 431
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERI-NKLLAHAKE 542
G P TY L + + +++ RI NK++ + E
Sbjct: 432 GHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIE 469
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 122/286 (42%), Gaps = 40/286 (13%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
E N ++D LG++K L E D+L + ++ T + ++ R +A +
Sbjct: 264 ETINCLLDSLGRAK---LGKEAQVLFDKLKERFTPNMMTYTVLLNGWCRVRNLIEAARIW 320
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS-QIFNILIHGWCKT 279
M +G++ D A +V+++ L++ A K+F K P + + + I+I +CK
Sbjct: 321 NDMIDHGLKPDIVAHNVMLEGLLRSMKKSDAIKLFHVMKSKGPCPNVRSYTIMIRDFCKQ 380
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-------- 331
++ A + +M G PD YTC I + +K V + LKEMQEKG
Sbjct: 381 SSMETAIEYFDDMVDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDGKTY 440
Query: 332 ---------------------------CKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+PS+ T+ ++M + A+ V+++M
Sbjct: 441 NALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDEMIK 500
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
PD + Y+ LI L G+ ++A E+M +G+ ++ YN
Sbjct: 501 KGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 546
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/447 (27%), Positives = 213/447 (47%), Gaps = 6/447 (1%)
Query: 86 SRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAF 145
S VL + + V +I KIL K ++ E L + +V + L++ ++ A
Sbjct: 72 STVLDGSKDVHVSEIVKIL-KSRDGDSELAEVLNQFSDEMDEDVVLKVLQKQRSNWKVAL 130
Query: 146 GFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD-ELNNGYVSLATMSTIM 204
FF WA Y H Y M+D+LG+ KK LM +L E+ E ++ + ++
Sbjct: 131 SFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPMESRQSVITNRMFAVLL 190
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL 264
R + +A++ F K YG E D +L+ +L + VE A +FL+ KD P
Sbjct: 191 NRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPP 250
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ +NI+++GWC + DA++ E+ PD+ +Y FI +
Sbjct: 251 VIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLF 310
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
M EKG P V ++ L K+I EAL+++ +M C D + Y++LI K
Sbjct: 311 TSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKI 370
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
R++ E+ +DM+ +GV PN +TY+ ++ + + ++ + L+Q+ME+ C+ D +TY
Sbjct: 371 NRMEKVYELLDDMEVKGVSPNNMTYSYILKTT---EKPKDVISLMQRMEKSGCRLDSDTY 427
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
+L + K + + M +N D ++ +V GL GKL+ A ++ M S
Sbjct: 428 NLILNLYVSWDYEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHGKLDEALHYYRTMES 487
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKE 531
+G+ P T K+L + + K+ A E
Sbjct: 488 RGMTPEPRT-KLLVKAIRMKKDEPATE 513
>gi|297807171|ref|XP_002871469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317306|gb|EFH47728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 602
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 133/465 (28%), Positives = 227/465 (48%), Gaps = 17/465 (3%)
Query: 94 ETDVDKISKILSKQYQSPDKVVE-ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAK 152
+TD+ IS +L P +E AL G+ S LV+ R S+ F WA+
Sbjct: 67 KTDLSTISNLLENTNVVPGSSLESALDETGIEPSLQLVQALFDRLSSSPMLLHSVFKWAE 126
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM---DELNNGYVSLATMSTIMRRLVR 209
+ G+ +P +++++++ L K+++F + W LV + DE +N VS T ++RR R
Sbjct: 127 MKPGFTLSPSLFDSVINSLCKAREFEIAWSLVFDRVRSDEGSN-LVSADTFIVLIRRYAR 185
Query: 210 GGRYDDAVEAFRGMKKY----GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------ 259
G A+ AF + Y + + L VL+D L K V A V+LE +
Sbjct: 186 AGMVQQAIRAFEFARSYEPVCKSASELKLLEVLLDALCKEGYVREA-SVYLERRRGMMDS 244
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ +P S +IFNIL++GW ++RK+ A+K +EM P VV+Y IE YCR +
Sbjct: 245 NWVP-SVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRMRRVEI 303
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ L+EM+ + + + + ++ LG+A +++EAL + E+ + P Y+SL+
Sbjct: 304 AMEILEEMKMAEMELTFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTYNSLVK 363
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
KAG + A++I + M +GV P TYN ++ E + L K+ E P
Sbjct: 364 NFCKAGDLPGASKILKMMMTRGVEPTTSTYNHFFKYFSKHNKTEEGMNLYFKLIEAGHSP 423
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY +LKM C ++ + + M + D T L+ L LE A F
Sbjct: 424 DRLTYHLILKMLCEDGKLSLAIQVNKEMKNRGIDPDLLTTTMLMHLLCRLDMLEEAFEEF 483
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
+ + +GI+P + T+KM++ L K + + +R++ L++ K
Sbjct: 484 DNAVRRGIIPQYITFKMIDNGLRSKGMTDMAKRLSSLMSSLPHSK 528
>gi|449505615|ref|XP_004162522.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g73400, mitochondrial-like [Cucumis sativus]
Length = 559
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/427 (28%), Positives = 206/427 (48%), Gaps = 12/427 (2%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
ET+ DK+ + + + + AL GV ++ LV L R D AF FFTWA
Sbjct: 83 ETNADKLHRAIVDNSYAHHDMEGALDQVGVYLTTDLVADILHRLRFDEKLAFRFFTWAAR 142
Query: 154 QTGYMHTPEMYNTMVDVLG----KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
Q Y H P +YN M+D+L K K+F ++ +L+ M + V + + I+R
Sbjct: 143 QENYSHEPRVYNEMIDILSSTRYKVKQFRIVCDLLDYMKRNDKNTVPVEVLFGILRNYT- 201
Query: 210 GGRYDDAVEAFRGMKKYGVEK--DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ 267
+Y ++ F KK V++ + A ++L+D L K + VE A + + K + +
Sbjct: 202 -DKYLTCLQKFAKKKKVIVKRQPEINAFNLLLDALCKCSLVEDAEALLKKVKKKLKPDAN 260
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+NI+ GWC+ R + ++EM + GF PD +Y I +C+ ++ + + M
Sbjct: 261 TYNIMXFGWCRVRNPGRGMRVLEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFM 320
Query: 328 QEKGC---KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+ KG P+ TY I++ AL ++ E K E M CLPD S Y +I + A
Sbjct: 321 RTKGSALSSPTAKTYAIMIVALVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGICVA 380
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G+V++A E+M K+G P+++TYN + C ++AL+ +M E C P +TY
Sbjct: 381 GKVQEAYMFLEEMGKKGYPPDIVTYNCFLKVLCDNKMSDDALRHCDRMIEVGCLPSVQTY 440
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ M + M + + D +Y ++ GL K+ AC EE+++
Sbjct: 441 NMLISMFFEMNDHNGAFQIWLEMDRYGCTRDVDSYCIMIEGLFGCNKVGDACLLLEEVVN 500
Query: 505 KGI-VPY 510
KG+ +P+
Sbjct: 501 KGMKLPF 507
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 96/216 (44%), Gaps = 15/216 (6%)
Query: 315 KDFRKVDDTLKEMQ--EKGCKPSVITYTIVMHALGK----AKQINEALKVYEKMKSDDCL 368
K FR V D L M+ +K P + + I+ + K ++ + KV K +
Sbjct: 168 KQFRIVCDLLDYMKRNDKNTVPVEVLFGILRNYTDKYLTCLQKFAKKKKVIVKRQ----- 222
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P+ + ++ L+ L K V+DA E K+ + P+ TYN M C +++
Sbjct: 223 PEINAFNLLLDALCKCSLVEDA-EALLKKVKKKLKPDANTYNIMXFGWCRVRNPGRGMRV 281
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD---AGTYASLVRG 485
L++M E PD TY + C+ +K L M ++ A TYA ++
Sbjct: 282 LEEMIELGFDPDNFTYNTAIASFCKAGMLKEACELFEFMRTKGSALSSPTAKTYAIMIVA 341
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ +G++E F E MI G +P STYK + E +
Sbjct: 342 LVNNGRMEECFKFLEYMIKSGCLPDVSTYKEMIEGI 377
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 192/397 (48%), Gaps = 3/397 (0%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
+ FF W+ + G+ +PE YN M+D+ GK ++F L W ++ M +++ T S +
Sbjct: 161 SLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVIDLMKS-RGVEITVHTFSAL 219
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
+RR VR G +AV AF M+ YG D A S+++ +L K A F K
Sbjct: 220 VRRYVRAGLAAEAVHAFNRMEDYGCTPDMVAFSIVISSLCKKRRANEAQSFFDSLKHRFE 279
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
++ L+HGWC+ + A++ +M G P+V +Y+ I+ CR + D
Sbjct: 280 PDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCRCGQITRAHDV 339
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
EM + GC P+ +T+ +M KA + + LKVY +MK C DT Y+ +I +
Sbjct: 340 FSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTISYNFIIESHCR 399
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
+++A +I M K+GV PN T+N + + A ++ +M+E C+P+ T
Sbjct: 400 DENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMKELNCQPNTLT 459
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y L++M + ++ + M ++ V + TY L+ + A EM+
Sbjct: 460 YNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWNNAYKLMMEMV 519
Query: 504 -SKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLA 538
K + P S Y+ + E L K +L +E ++K++A
Sbjct: 520 EEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKMVA 556
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 186 bits (471), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 112/409 (27%), Positives = 204/409 (49%), Gaps = 6/409 (1%)
Query: 111 PDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT-WAKTQTGYMHTPEMYNTMVD 169
P + EAL + + LV +TL+R N A FF + Y H+P ++ VD
Sbjct: 50 PRTLSEALTKPRIHWTPELVNKTLKRLWNHGPKALLFFKHLDRHLPSYTHSPSSFDHAVD 109
Query: 170 VLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
+ + + F W LV M L G S T++ + R G+ AV F M ++G+
Sbjct: 110 IAARMRDFNSAWALVGRMRSLRLG-PSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLH 168
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+D + + L+D L K N VE A+ + K + +NIL +G+C ++ A + +
Sbjct: 169 QDLHSFNTLLDILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLKKRTPMALRVL 228
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
KEM Q+G P +V+Y ++ Y R ++ + EM+++ C+ V++YT V+H G+A
Sbjct: 229 KEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEA 288
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV-PNVLT 408
++ +A +V+++M + P+ + Y++LI + K V++A +FE+M ++GV PNV+T
Sbjct: 289 GEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVT 348
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
+N +I C + E AL +++M E + +TY +++ C ++ + M
Sbjct: 349 FNVVIRGLCHVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMG 408
Query: 469 KNDVSMDAGTYASLVRGLI---ESGKLELACSFFEEMISKGIVPYHSTY 514
+ TY L+ + +S L +A EM+ +G +P T+
Sbjct: 409 DGLCLPNLDTYNVLISAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTF 457
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 106/222 (47%), Gaps = 1/222 (0%)
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
S+ ++ R +DF + M+ PS T I+ + + A++ + M
Sbjct: 103 SFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSM 162
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
D +++L+ IL K+ RV+ A+++ +K + P+ ++YN + + C +
Sbjct: 163 HEHGLHQDLHSFNTLLDILCKSNRVETAHDLLRTLKSR-FRPDTVSYNILANGYCLKKRT 221
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
AL++L++M + +P TY +LK R ++K M K +D +Y ++
Sbjct: 222 PMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTV 281
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ G E+G+++ A F+EM+ +G+ P +TY L + KK
Sbjct: 282 IHGFGEAGEVKKAKRVFDEMVKEGVAPNVATYNALIQVFCKK 323
>gi|334183891|ref|NP_177483.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806278|sp|Q9FX35.2|PP117_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g73400, mitochondrial; Flags: Precursor
gi|332197336|gb|AEE35457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 568
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/466 (27%), Positives = 219/466 (46%), Gaps = 18/466 (3%)
Query: 87 RVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFG 146
R NH + + + + + D + +AL V ++ +V + L+R + AF
Sbjct: 87 RTKGSNHAVGI--LHEAIMANLNAYDDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFR 144
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLG----KSKKFCLMWELVKEMDELNNGYVSLATMST 202
FFTWA Q Y H P YN M+D+L K+K+F ++ +++ M N V + +
Sbjct: 145 FFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLE 204
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGV--EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
I+R+ RY V+ F K+ V + + A ++L+D L K V+ + +
Sbjct: 205 ILRKYCE--RYLTHVQKFAKRKRIRVKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRH 262
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
+ + FN+L GWC+ R A K ++EM + G P+ +Y I+ +C+ +
Sbjct: 263 RVKPDANTFNVLFFGWCRVRDPKKAMKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEA 322
Query: 321 DDTLKEMQEKGCK---PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
D M KG P+ T+ +++ AL K + E ++ +M S CLPD S Y +
Sbjct: 323 ADLFDFMITKGSAVSAPTAKTFALMIVALAKNDKAEECFELIGRMISTGCLPDVSTYKDV 382
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + A +V +A + ++M +G P+++TYN + C + + ALKL +M E C
Sbjct: 383 IEGMCMAEKVDEAYKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRC 442
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P +TY L+ M T M K D D TY +++ GL + + + AC
Sbjct: 443 APSVQTYNMLISMFFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACF 502
Query: 498 FFEEMISKGI-VPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKE 542
EE+++KG+ +PY L + +GN K I+K+ H K+
Sbjct: 503 LLEEVVNKGLKLPYRVFDSFL---MRLSEVGNLKA-IHKVSEHMKK 544
>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 132/466 (28%), Positives = 217/466 (46%), Gaps = 14/466 (3%)
Query: 93 HETDVDKISKIL-SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWA 151
H+ D + IL + Q + AL G+ L++ F + F WA
Sbjct: 78 HQNDFFTLCNILKDPKIQLGPSLRTALDRTGIEPELGLIQSVFDHFDSSPKLLHSVFLWA 137
Query: 152 KTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG--YVSLATMSTIMRRLVR 209
+ + G+ + ++N+MV+ LGK+++F W L+ + N G VS T + ++RR R
Sbjct: 138 EKKPGFQSSAALFNSMVNFLGKAREFGSAWCLLLDRIGGNEGGDLVSSDTFAILIRRYTR 197
Query: 210 GGRYDDAVEAFRGMKK----YGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCI 262
G + A+ F + E T +L+D+L K V A F +E C
Sbjct: 198 AGMSEAAIRTFEYASSLDLIHNSEAGTSLFEILLDSLCKEGHVRVATDYFDRKVEKDPCW 257
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
S +I+NIL++GW ++RK+ A++ EM ++ P VV+Y +E Y R + + +
Sbjct: 258 VPSVRIYNILLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTYGTLVEGYSRMRRVERAIE 317
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+ EM+ +G K + I Y ++ AL +A + E L + E + P S Y+SL+
Sbjct: 318 LVDEMKREGIKSNAIVYNPIIDALAEAGRFKEVLGMMEHFFLCEEGPTISTYNSLVKGYC 377
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS--SACARSEEENALKLLQKMEEDLCKPD 440
KAG + A++I + M + V P TYN S C + EE + L KM E PD
Sbjct: 378 KAGDLVGASKILKMMISREVFPTPTTYNYFFRHFSKCRKIEE--GMNLYTKMIESGYTPD 435
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY LLKM C ++R+ + + M MD T L + + E A + FE
Sbjct: 436 RLTYHLLLKMLCEEERLDLAVQISKEMRARGCDMDLATSTMFTHLLCKMQRFEEAFAEFE 495
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
+M+ +GIVP + T+ L ++ K+ L R+ KL++ K
Sbjct: 496 DMLRRGIVPQYLTFHRLNDEFRKQGLTELARRLCKLMSSVSHSKNL 541
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 115/393 (29%), Positives = 189/393 (48%), Gaps = 5/393 (1%)
Query: 141 LTPAFGFFTWAKTQTGY-MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
L + FF WA ++ Y +P YN M+D+ GK ++F L W L+ M N +S+ T
Sbjct: 130 LHQSLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLAWHLIDLMKS-RNVEISIET 188
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
+ ++RR VR G +AV F M+ YG D A S+++ L + A F K
Sbjct: 189 FTILIRRYVRAGLASEAVHCFNRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLK 248
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
D ++ L+ GWC+ ++ +A+K K+M G P+V +Y+ I+ CR +
Sbjct: 249 DRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISR 308
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
D +M + GC P+ IT+ +M KA + + L+VY +MK C PDT Y+ LI
Sbjct: 309 AHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIE 368
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+ +++A ++ M K+ N T+NT+ + + A ++ KM E C+P
Sbjct: 369 THCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAKCEP 428
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
+ TY L++M K ++ + M +V + TY LV G A F
Sbjct: 429 NTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYRLLVTMFCGMGHWNNAYKLF 488
Query: 500 EEMI-SKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
+EM+ K + P S Y+M+ +L +R G K+
Sbjct: 489 KEMVEEKCLTPSLSLYEMVLAQL--RRAGQLKK 519
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 124/277 (44%), Gaps = 1/277 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
S +N +I K R+ D A + M + + ++T I Y R +
Sbjct: 150 SPHPYNEMIDLAGKVRQFDLAWHLIDLMKSRNVEISIETFTILIRRYVRAGLASEAVHCF 209
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
M++ GC P I ++IV+ L + ++ +EA ++ +K D PD Y++L+ +A
Sbjct: 210 NRMEDYGCVPDQIAFSIVISNLSRKRRASEAQSFFDSLK-DRFEPDVIVYTNLVRGWCRA 268
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G + +A ++F+DMK G+ PNV TY+ +I + C + A + M + C P+ T+
Sbjct: 269 GEISEAEKVFKDMKLAGIEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITF 328
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+++ + R + + + M K D TY L+ LE A MI
Sbjct: 329 NNLMRVHVKAGRPEKVLQVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIK 388
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAK 541
K ST+ + +EKKR N R+ + AK
Sbjct: 389 KKCEVNASTFNTIFRYIEKKRDVNGAHRMYSKMMEAK 425
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 122/244 (50%), Gaps = 7/244 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ ++D L + + ++ +M L++G A T + +MR V+ GR + ++ +
Sbjct: 293 YSIVIDALCRCGQISRAHDVFADM--LDSGCAPNAITFNNLMRVHVKAGRPEKVLQVYNQ 350
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
MKK G E DT + L++T + ++E+A KV K C +++ FN + K R
Sbjct: 351 MKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKC-EVNASTFNTIFRYIEKKR 409
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V+ A + +M + P+ V+Y + + K V K+M +K +P+V TY
Sbjct: 410 DVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNVNTYR 469
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCL-PDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+++ N A K++++M + CL P S Y ++ L +AG++K E+ E M +
Sbjct: 470 LLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQ 529
Query: 400 QGVV 403
+G+V
Sbjct: 530 KGLV 533
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 222/458 (48%), Gaps = 10/458 (2%)
Query: 82 SRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFS--- 138
+ I R+ + N DV K+ IL+ SP+ + ++LK + +SN L++Q L+R
Sbjct: 13 TSILRRLSTFNPNDDVHKVYTILTTT-SSPETLKQSLKSTQIFLSNELIDQVLKRVRFGH 71
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
+ FF + + G+ HT +TM+ +LG+S+ F +WEL+ E + ++
Sbjct: 72 ANPNQTLEFFRYTGRRKGFYHTAYSLDTMLYILGRSRMFDHVWELLIEARRKDQNVITPR 131
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T+ ++ R+ + VE FR KK + + L+ TL + S+ A V+
Sbjct: 132 TVMVVLGRVAKVCSVRQTVETFRKFKKIVPDYGVNCFNALLRTLCQEKSMTDARNVYHSL 191
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K + Q FNIL+ GW + V+DA+ + EM + G PDVV+Y ++ YC+ ++
Sbjct: 192 KHNFRPNLQTFNILLSGW---KNVEDAELFVNEMKEMGVEPDVVTYNSLVDVYCKGREIE 248
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
K EM+EK P VITYT V+ LG Q ++A V ++MK PD Y++ I
Sbjct: 249 KAYKVFDEMREKDLSPDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNAAI 308
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
A R+ A E+ ++M +G+ PN TYN ++ +++ L ++M + C
Sbjct: 309 RNYCIAKRLGIAFELVDEMVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGEGCL 368
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P ++ L+++ R ++M++ L M + L L + GKL A
Sbjct: 369 PYTQSCMFLIRLFKRHEKMEMALQLWGEMVEKGFGSYTLVSDVLFDMLCDMGKLMEAEKC 428
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
F EMI KG P + ++K ++ +E L N E I L
Sbjct: 429 FLEMIEKGQRPSNVSFKRIKVLME---LANKHEAIQNL 463
>gi|11120809|gb|AAG30989.1|AC012396_25 hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 211/441 (47%), Gaps = 16/441 (3%)
Query: 112 DKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL 171
D + +AL V ++ +V + L+R + AF FFTWA Q Y H P YN M+D+L
Sbjct: 8 DDMEKALDESSVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDIL 67
Query: 172 G----KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG 227
K+K+F ++ +++ M N V + + I+R+ RY V+ F K+
Sbjct: 68 SSTKYKNKQFRIVIDMLDYMKRNNKTVVLVDVLLEILRKYCE--RYLTHVQKFAKRKRIR 125
Query: 228 V--EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDA 285
V + + A ++L+D L K V+ + + + + FN+L GWC+ R A
Sbjct: 126 VKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKA 185
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK---PSVITYTIV 342
K ++EM + G P+ +Y I+ +C+ + D M KG P+ T+ ++
Sbjct: 186 MKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 245
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ AL K + E ++ +M S CLPD S Y +I + A +V +A + ++M +G
Sbjct: 246 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 305
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+++TYN + C + + ALKL +M E C P +TY L+ M
Sbjct: 306 PPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFN 365
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI-VPYHSTYKMLEEKL 521
T M K D D TY +++ GL + + + AC EE+++KG+ +PY L +
Sbjct: 366 TWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLPYRVFDSFL---M 422
Query: 522 EKKRLGNAKERINKLLAHAKE 542
+GN K I+K+ H K+
Sbjct: 423 RLSEVGNLKA-IHKVSEHMKK 442
>gi|226495005|ref|NP_001148062.1| GTP binding protein [Zea mays]
gi|195615570|gb|ACG29615.1| GTP binding protein [Zea mays]
Length = 535
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 114/410 (27%), Positives = 200/410 (48%), Gaps = 5/410 (1%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
V + ++ L++ ++ A FF WA T GY H Y M+D+LG+ KK M +
Sbjct: 106 VHMDEDIILMVLQKQRSNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQ 165
Query: 183 LVKEMDELNNGYVSLATM-STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
L E+ E V M + ++ R + +A+E F K YG E D +L+ +
Sbjct: 166 LFDEIPEERRQVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMS 225
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
L + VE A +F E KD P ++ +NI+++GWC + DAQ+ ++ D+
Sbjct: 226 LCRYKHVEEAEALFREKKDEFPHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDL 285
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
++ FI + K+M EKG P V ++ L K+I EAL+++ +
Sbjct: 286 FTFGTFINALAKNGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGE 345
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M C D + Y++LI + K R++ E+ +DM+ +G PN TY+ ++ + +
Sbjct: 346 MNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDMEAKGCSPNNRTYSYILKTT---EK 402
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
++ + L+Q+ME CK D + Y +L + + K K + + M + D ++
Sbjct: 403 PKDVIALMQRMERSGCKLDSDMYNLILNLYIKWKYEKGMQQIWDEMERRGSGPDQRSFTI 462
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
+V GL GKL+ A ++ M S+G++P T K+L + + K+ G+A E
Sbjct: 463 MVHGLHSQGKLDEALQYYTTMKSRGMIPEPRT-KILAKAMHMKKDGSAAE 511
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 201/414 (48%), Gaps = 3/414 (0%)
Query: 125 VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV 184
+S +V + L+R D A FF WA+T+ GY H N +++VL K+ ++ +L
Sbjct: 91 LSPEIVGKVLQRLI-DPGAALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLF 149
Query: 185 KEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
+ E G ++ T ST++ +R G+ A E F M + G++ ++ L
Sbjct: 150 RSRIEGQWGGDTV-TYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCD 208
Query: 245 GNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
A F E P S +N +I+G K+ ++DDA + ++EM GF+P+V SY
Sbjct: 209 AGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSY 268
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ +C+ L++M +GC P V++YT V++ L K Q++EA +V +KM
Sbjct: 269 NTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ 328
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
C P+ Y +L+ + G + A E+ M ++G PN +TYN ++ C R++ E
Sbjct: 329 RGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMER 388
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A ++LQ M + C PD Y+ ++ C+ +++ + LL M + D ++L+
Sbjct: 389 AHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLID 448
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLL 537
L ++ ++ A I P Y +L L K KRL A+ ++ ++
Sbjct: 449 ALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMV 502
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 126/480 (26%), Positives = 236/480 (49%), Gaps = 46/480 (9%)
Query: 99 KISKILSKQY--QSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
KI +IL+ ++ + + +E G ++ ++V + L+ N A GFF WA +Q G
Sbjct: 784 KIVRILNSRFAWEYAETALERFTG---KLTTTVVGKVLQGVRNG-DAALGFFDWATSQEG 839
Query: 157 YMH-------------------------------TPEMYNTMVDVLG--KSKKFCLMWEL 183
Y H +P M+ + + G ++ +EL
Sbjct: 840 YNHDTYTCNCLLQALLRLKRPKDALQVYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYEL 899
Query: 184 VKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG-VEKDTRALSVLMDTL 242
+KEM + ++ + +++ L + D A+E F+ M++ G D S ++D+L
Sbjct: 900 LKEMPR-HGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSL 958
Query: 243 VKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
VK V+ A ++ + K C P + ++ L+HG CK K+D+A ++ M + G SP+
Sbjct: 959 VKSGKVDDACRLVEDMVSKGCSP-NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPN 1017
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+V+Y I+ +C+ + L+EM + GC+P+V+TYT+++ A K + +A+ + E
Sbjct: 1018 IVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVE 1077
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
M +P+ Y+SL+ + K V+ A ++ M ++G VPNV++YNT+I+ C +
Sbjct: 1078 VMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKAT 1137
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+ + LL++M + C PD T+ ++ C+ R+ + L + ++ + + TY
Sbjct: 1138 KVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYN 1197
Query: 481 SLVRGLIESGKLELACSFFEEMISK-GIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLA 538
SLV GL +S + + A EM K G P TY + + L K KR+ A + ++L+
Sbjct: 1198 SLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLS 1257
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 173/353 (49%), Gaps = 6/353 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGG 211
T+ GY YN ++ V + ++++ M + G A STI+ + G
Sbjct: 362 TERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMM--IQTGCPPDAINYSTIISGFCKAG 419
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIF 269
+ +A + M + G D LS L+D L K +++ A ++ DC P +
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAP-DVVAY 478
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+ILIH CK +++ +A+ + M + PDVV+Y ++ C+ + M+
Sbjct: 479 SILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRA 538
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
G P V+TY+IV+H+ K ++ A K+ E+MK C+PD YS+LI L KAG V
Sbjct: 539 AGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDK 598
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A ++F++M G PN++TYNT+I C ++ E A ++L+ M + C PD TY L+
Sbjct: 599 AFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLIN 658
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
C R++ +L M D TY +L+R L ++ LEL +EM
Sbjct: 659 GLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEM 711
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 176/348 (50%), Gaps = 6/348 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ L + R DDA+ M G + + + ++ K N VE+A + +
Sbjct: 232 TYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQM 291
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ C P + +I+G CK +VD+A + M +M Q+G P+V++Y ++ +CR D
Sbjct: 292 VTRGCPP-DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGD 350
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ +++M E+G +P+ ITY +MH + + A +V + M C PD YS+
Sbjct: 351 LDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I KAG++++A+++ E M ++G P+V +T+I + C + ++A +LL+
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C PD Y+ L+ C+ KR+ L M KN D TY S+V GL +S ++ A
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
F+ M + G++P TY ++ K N + K+L KE K
Sbjct: 531 LLFDRMRAAGVMPDVVTYSIVIHSFCKD---NNLDSAFKMLERMKEAK 575
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/378 (27%), Positives = 185/378 (48%), Gaps = 4/378 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N ++ L ++K EL KEM+E + + T STI+ LV+ G+ DDA
Sbjct: 914 LHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVED 973
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M G + S L+ L K ++ A + + C P + +N +I G CK
Sbjct: 974 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP-NIVTYNTIIDGHCKLG 1032
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++D+A ++EM G P+VV+YT ++ +C+ ++ M EKG P++ TY
Sbjct: 1033 RIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYN 1092
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K ++ A ++ M C+P+ Y+++I L KA +V + + E M
Sbjct: 1093 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 1152
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
VP+++T+NT+I + C + A +L ++E C P+ TY L+ C+ +R
Sbjct: 1153 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 1212
Query: 461 NFLLTHMF-KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+LL M K S D TY +++ GL +S +++ A F +M+S G+ P TY ++
Sbjct: 1213 EYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVIS 1272
Query: 520 KLEKKRLGNAKERINKLL 537
L K R + + +L+
Sbjct: 1273 SLCKWRFMDEANNVLELM 1290
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 106/377 (28%), Positives = 176/377 (46%), Gaps = 9/377 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRG 222
Y T+VD + ELV++M E GY A T + IM R + A + +
Sbjct: 338 YGTLVDGFCRVGDLDGAVELVRKMTE--RGYRPNAITYNNIMHVFCRRNDMERAHQVLQM 395
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M + G D S ++ K + A+ + + + C P + LI CK
Sbjct: 396 MIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRP-DVACLSTLIDALCKAA 454
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+D AQ+ ++ +PDVV+Y+ I C+ K + + L M + C P V+TY
Sbjct: 455 AIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYN 514
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
V+ L K+++IN+A ++++M++ +PD YS +I K + A ++ E MK+
Sbjct: 515 SVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEA 574
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
VP+V+TY+ +I+ C + A + Q+M C P+ TY L+ C+ +++
Sbjct: 575 KCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQA 634
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+L M K + D+ TY L+ GL + +LE A EM KG +P TY L
Sbjct: 635 AEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRA 694
Query: 521 LEKKRLGNAKERINKLL 537
L+K N E + +LL
Sbjct: 695 LQKT---NNLELVEQLL 708
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/367 (28%), Positives = 176/367 (47%), Gaps = 9/367 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y ++D K K LV+ M E GYV +L T ++++ + + A +
Sbjct: 1056 YTVLLDAFCKCGKAEDAIGLVEVMVE--KGYVPNLFTYNSLLDMFCKKDEVERACQLLSS 1113
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE---FKDCIPLSSQIFNILIHGWCKT 279
M + G + + + ++ L K V H + LE +C+P FN +I CKT
Sbjct: 1114 MIQKGCVPNVVSYNTVIAGLCKATKV-HEGVLLLEQMLSNNCVP-DIVTFNTIIDAMCKT 1171
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GCKPSVIT 338
+VD A + + + G +P++V+Y + C+ + F + + L+EM K GC P +IT
Sbjct: 1172 YRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIIT 1231
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y V+ L K+K+++ A K++ +M SD PD YS +I L K + +AN + E M
Sbjct: 1232 YNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELML 1291
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
K G P +TY T+I C + AL++LQ + PD T++ + ++ R++
Sbjct: 1292 KNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLR 1351
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
LL M + + D TY +L++G ++ E A FE M G P ++TY L
Sbjct: 1352 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411
Query: 519 EKLEKKR 525
L K+
Sbjct: 1412 GHLVDKK 1418
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 154/310 (49%), Gaps = 5/310 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q G + YNT++ L K+ K L+++M NN + T +TI+ + + R
Sbjct: 1116 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS-NNCVPDIVTFNTIIDAMCKTYRV 1174
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQIFN 270
D A E F +++ G + + L+ L K + A + E + C P +N
Sbjct: 1175 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP-DIITYN 1233
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+I G CK+++VD A K +M G +PD V+Y+ I C+ + + ++ L+ M +
Sbjct: 1234 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN 1293
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P ITY ++ K +++AL++ + + S PD +S I LSK GR++ A
Sbjct: 1294 GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQA 1353
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+ E M + G+VP+ +TYNT++ C S E+A+ L + M + C+PD TY L+
Sbjct: 1354 GELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGH 1413
Query: 451 CCRKKRMKVL 460
KK K L
Sbjct: 1414 LVDKKSYKDL 1423
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 161/379 (42%), Gaps = 60/379 (15%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
N++++ + + D+ A+ F + ++G YN++V L KS++F L++E
Sbjct: 1162 NTIIDAMCKTYRVDI--AYELFNLIQ-ESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLRE 1218
Query: 187 MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
M + T +T++ L + R D A + F M G+ D S+++ +L K
Sbjct: 1219 MTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWR 1278
Query: 247 SVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
++ A V L K+ + + LI G+CKT +D A + ++ + +G PDVV+++
Sbjct: 1279 FMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFS 1338
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
FI+ + R+ + L+ M G P +TY ++ A +A+ ++E M+
Sbjct: 1339 IFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQC 1398
Query: 366 DCLPDTSFYSSL------------------------------------------------ 377
C PD + Y++L
Sbjct: 1399 GCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRL 1458
Query: 378 ----IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+ + K G +DA ++FE M ++ NV+ ++ M+ +EE A L + M
Sbjct: 1459 GCAIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGLWRVMG 1514
Query: 434 EDLCKPDCETYAPLLKMCC 452
+ +PD T+ LL MCC
Sbjct: 1515 LEGVEPDAVTFLSLLTMCC 1533
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 119/287 (41%), Gaps = 29/287 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
++ +D L K + EL++ M L G V T +T+++ +DAV+ F
Sbjct: 1337 FSIFIDWLSKRGRLRQAGELLETM--LRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEV 1394
Query: 223 MKKYGVEKDTRALSVLMDTLV------------------KGNSVEHAYKVFLEFKDCIPL 264
M++ G E D + L+ LV G + H LE +
Sbjct: 1395 MRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEA 1454
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
++ ++ + K DA+K + M Q+ +VV ++ + Y K +
Sbjct: 1455 DVRLGCAIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGLW 1510
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL-PDTSFYSSLIFILSK 383
+ M +G +P +T+ ++ A ++ A+ + + D L P +S +I +L +
Sbjct: 1511 RVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGR 1570
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
G V +A ++ M + P+ T+N ++S+ + E AL++ +
Sbjct: 1571 LGLVNEAEDLMLGMPCK---PSAATWNCLLSAYKICGDFERALRVAE 1614
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/359 (30%), Positives = 197/359 (54%), Gaps = 6/359 (1%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP++ Y+ +++ LG++ K+ E+V EM + +L T +T++ L + G++D+A+
Sbjct: 41 TPDVVSYSCLINSLGRAGKWEAALEVVAEM-QAKGCKPNLWTYNTLVDCLGKAGQFDEAL 99
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHG 275
M+ G D R + L+ TL K + A+ +F E ++ C+P + +N LI+G
Sbjct: 100 RLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVP-DTFTYNSLIYG 158
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
K + A + ++EM + G PDV++Y+ I ++ + K +EM+ +G KP
Sbjct: 159 LGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPD 218
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
IT+T +M ALGKA ++++AL++ ++MK P Y++LI K G + +A + +
Sbjct: 219 SITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLD 278
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+MK+ G P+V+TY+ +I+ S+ + A ++L+KME++ C PD TY L+ +
Sbjct: 279 EMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAG 338
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ L M + D TY++L+ L ++ ++E AC FEEM S GI P TY
Sbjct: 339 LLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTY 397
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 116/364 (31%), Positives = 190/364 (52%), Gaps = 4/364 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ LGK+ + + L EM E G V T ++++ L + GR A+E
Sbjct: 117 YNCLISTLGKAGRLSEAFTLFAEMRE--RGCVPDTFTYNSLIYGLGKVGRSQKAMELLEE 174
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRK 281
M+++G D S L+ L K A+K+F E K I F L+ K +
Sbjct: 175 MERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGR 234
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VDDA + + EM ++G P VV+Y I + + D + + L EM+ GCKP V+TY+
Sbjct: 235 VDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSC 294
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L KA Q++EA +V +KM+ + C PDT Y++LI L KAG + DA +F+ MK +G
Sbjct: 295 LITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKG 354
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+V+TY+T+I++ + E+A L ++ME +PD TY ++ + + ++ +
Sbjct: 355 CNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDAD 414
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + M +S D TY + + L G+ + A FE+M G++P +TY L L
Sbjct: 415 RLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGL 474
Query: 522 EKKR 525
K +
Sbjct: 475 SKTK 478
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 112/367 (30%), Positives = 193/367 (52%), Gaps = 3/367 (0%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
L+ AF F + + G + YN+++ LGK + EL++EM E + + T
Sbjct: 130 LSEAFTLFAEMR-ERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEM-ERHGCPPDVMTY 187
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
S+++ L + G A + F+ MK+ G + D+ + LMD L K V+ A ++ E K+
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ +N LI G+ K + +A + EM + G PDVV+Y+C I + +
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDE 307
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
LK+M+++GC P ITY +++ LGKA +N+A +++++MKS C PD YS+LI
Sbjct: 308 ACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLIT 367
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L KA RV+ A +FE+M+ G+ P++ TY ++I+ + ++A +L +M P
Sbjct: 368 ALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSP 427
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY L R R K + M ++ + D TY +L+ GL ++ +++ AC
Sbjct: 428 DVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLL 487
Query: 500 EEMISKG 506
+E+I +G
Sbjct: 488 KELIEQG 494
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/375 (29%), Positives = 184/375 (49%), Gaps = 6/375 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y++++ LGK + ++L +EM S+ T + +M L + GR DDA+E M
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSI-TFTALMDALGKAGRVDDALELLDEM 245
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRK 281
K+ GV+ + L+ K + AY + E K C P ++ LI G K +
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKP-DVVTYSCLITGLIKASQ 304
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A + +K+M ++G PD ++Y I + M+ KGC P V+TY+
Sbjct: 305 LDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYST 364
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ ALGKA ++ A ++E+M+S PD Y S+I +L KAG+V DA+ +F +M+ +G
Sbjct: 365 LITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKG 424
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+V+TYN ++S + A K+ + M+E PD TY LL + K +
Sbjct: 425 LSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDAC 484
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL + + + D+ + + L G ++ A + SKG+ P S+Y L + L
Sbjct: 485 GLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDAL 544
Query: 522 EKKRLGNAKERINKL 536
K G E N L
Sbjct: 545 AKA--GRVSEAFNTL 557
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/249 (32%), Positives = 138/249 (55%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N L++ K + ++AQ +E+ ++PDVVSY+C I R + + + EMQ
Sbjct: 12 YNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQ 71
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
KGCKP++ TY ++ LGKA Q +EAL++ +M+ + C+PD Y+ LI L KAGR+
Sbjct: 72 AKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLS 131
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A +F +M+++G VP+ TYN++I + A++LL++ME C PD TY+ L+
Sbjct: 132 EAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLI 191
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ L M + D+ T+ +L+ L ++G+++ A +EM +G+
Sbjct: 192 TGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVK 251
Query: 509 PYHSTYKML 517
P TY L
Sbjct: 252 PGVVTYNAL 260
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 156/332 (46%), Gaps = 36/332 (10%)
Query: 238 LMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L++ L K E A +F E K + ++ LI+ + K + A + + EM +G
Sbjct: 15 LLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQAKG 74
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
P++ +Y ++ + F + L EM++ GC P V TY ++ LGKA +++EA
Sbjct: 75 CKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAF 134
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
++ +M+ C+PDT Y+SLI+ L K GR + A E+ E+M++ G P+V+TY+++I+
Sbjct: 135 TLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGL 194
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK------------------ 458
E A KL Q+M+ KPD T+ L+ + R+
Sbjct: 195 GKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGV 254
Query: 459 ------VLNF-----------LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
+ F LL M +N D TY+ L+ GLI++ +L+ AC ++
Sbjct: 255 VTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKK 314
Query: 502 MISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
M +G P TY L L K L N R+
Sbjct: 315 MEKEGCPPDTITYNTLINGLGKAGLLNDAGRL 346
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 165/361 (45%), Gaps = 4/361 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++ GK + L+ EM N + T S ++ L++ + D+A + + M
Sbjct: 257 YNALIAGFGKVGDLVEAYNLLDEMKR-NGCKPDVVTYSCLITGLIKASQLDEACQVLKKM 315
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+K G DT + L++ L K + A ++F ++ K C P ++ LI K +
Sbjct: 316 EKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNP-DVVTYSTLITALGKAAR 374
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V+ A +EM G PD+ +Y I + D EM+ KG P VITY
Sbjct: 375 VESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNA 434
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++LG+ + EA K++E MK LPD + Y +L+ LSK V DA + +++ +QG
Sbjct: 435 FLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQG 494
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ L ++ + + + A +LLQ P +Y L+ + R+
Sbjct: 495 CAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAF 554
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + + D +Y+SL+ L ++G+++ A EEM +G+ +Y L KL
Sbjct: 555 NTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614
Query: 522 E 522
+
Sbjct: 615 Q 615
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 141/294 (47%), Gaps = 3/294 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ L + G +DA F MK G D S L+ L K VE A +F E
Sbjct: 326 TYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEM 385
Query: 259 KDCIPLSSQIFNI--LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ + + +F +I K +VDDA + EM +G SPDV++Y F+ R
Sbjct: 386 -ESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGR 444
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
F++ ++M+E G P V TY ++ L K K++++A + +++ C D+ +
Sbjct: 445 FKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDE 504
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+ IL+ G V +A+E+ + +G+ P +YN +I + A L+ ++E
Sbjct: 505 CLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQG 564
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
KPD +Y+ L+ + ++ LL M K + + +Y++LVR L + G
Sbjct: 565 GKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 126/244 (51%), Gaps = 2/244 (0%)
Query: 295 QGF-SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
+GF SP+VV+Y + + + +E++ P V++Y+ ++++LG+A +
Sbjct: 2 KGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWE 61
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
AL+V +M++ C P+ Y++L+ L KAG+ +A + +M+ G VP+V TYN +I
Sbjct: 62 AALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLI 121
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
S+ A L +M E C PD TY L+ + R + LL M ++
Sbjct: 122 STLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCP 181
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKER 532
D TY+SL+ GL + G+ A F+EM +G P T+ L + L K R+ +A E
Sbjct: 182 PDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALEL 241
Query: 533 INKL 536
++++
Sbjct: 242 LDEM 245
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 136/504 (26%), Positives = 230/504 (45%), Gaps = 22/504 (4%)
Query: 29 SCNPLCTTAESPSSTESPSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRV 88
SC P T +S E P + +F S P I + G S RL S
Sbjct: 31 SCTP---TVRQNASVELPGAGLYPRFHQSILP-----IHCVVG---SLRL-----CHSTA 74
Query: 89 LSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFF 148
L + + V +I KIL K ++ E L + +V + L++ ++ A FF
Sbjct: 75 LDGSKDVHVSEIVKIL-KSRDGDSELAEVLNQFADEMDEDVVLKVLQKQRSNWKVALSFF 133
Query: 149 TWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD-ELNNGYVSLATMSTIMRRL 207
WA Y H Y M+D+LG+ KK LM +L E+ E V+ + ++ R
Sbjct: 134 KWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLLNRY 193
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ 267
+ +A++ F K YG E D +L+ +L + VE A +FL+ KD P +
Sbjct: 194 AGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPPVIK 253
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+NI+++GWC + DA++ E+ PD+ +Y FI + M
Sbjct: 254 SWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSM 313
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
EKG P V ++ L K+I EAL+++ +M C D + Y++LI K R+
Sbjct: 314 WEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRM 373
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+ E+ +DM+ +GV PN +TY+ ++ + + ++ + L+Q+ME+ C+ D +TY +
Sbjct: 374 EKVYELLDDMEVKGVSPNNMTYSYILKTT---EKPKDVISLMQRMEKSGCRLDSDTYNLI 430
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
L + K + + M +N D ++ +V GL KL+ A ++ M S+G+
Sbjct: 431 LNLYVSWDYEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHDKLDEALHYYRTMESRGM 490
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKE 531
P T K+L + + K+ A E
Sbjct: 491 TPEPRT-KLLVKAIRMKKDEPATE 513
>gi|212274591|ref|NP_001130971.1| GTP binding protein [Zea mays]
gi|194690592|gb|ACF79380.1| unknown [Zea mays]
gi|413947420|gb|AFW80069.1| GTP binding protein [Zea mays]
Length = 535
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 118/434 (27%), Positives = 207/434 (47%), Gaps = 5/434 (1%)
Query: 99 KISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYM 158
++ K+L + AL V + ++ L++ ++ A FF WA T GY
Sbjct: 82 QVLKVLKSTSADNTDLSGALHQFAVHMDEDIILMVLQKQRSNWQVALAFFNWAATLPGYA 141
Query: 159 HTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM-STIMRRLVRGGRYDDAV 217
H Y M+D+LG+ KK M +L E+ E V M + ++ R + +A+
Sbjct: 142 HGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTNKMFAVLLNRYAGAHKVQEAI 201
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
E F K YG E D +L+ +L + VE A +F E KD P ++ +NI+++GWC
Sbjct: 202 EVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDEFPHVTKSWNIILNGWC 261
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ DAQ+ ++ D+ ++ FI + K+M EKG P V
Sbjct: 262 VKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAKNGRISAAVKLFKQMWEKGINPDVA 321
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
++ L K+I EAL+++ +M C D + Y++LI + K R++ E+ +DM
Sbjct: 322 ICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADVATYNTLIKYMCKIKRMEKVYELLDDM 381
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ +G PN TY+ ++ + + ++ + L+Q+ME CK D + Y +L + + K
Sbjct: 382 EAKGCPPNNRTYSYILKTT---EKPKDVIALMQRMERTGCKLDSDIYNLILNLYIKWKYE 438
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
K + + M + D ++ +V GL GKL+ A ++ M S+G++P T K+L
Sbjct: 439 KGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGKLDEALQYYTTMKSRGMIPEPRT-KIL 497
Query: 518 EEKLEKKRLGNAKE 531
+ + K+ G A E
Sbjct: 498 VKAMHMKKDGAATE 511
>gi|356531098|ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 117/404 (28%), Positives = 195/404 (48%), Gaps = 12/404 (2%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLG---- 172
AL G+ +S LV L R D A FFTWA Q Y H P YN M+D+L
Sbjct: 13 ALGQLGIPLSTPLVTGGLHRLRYDEKIALRFFTWAGHQEDYSHEPCAYNDMMDILSSTRY 72
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK-- 230
K K+F ++ ++++ M N V + I+R+ +Y ++ F K+ V+
Sbjct: 73 KVKQFRIVCDVLEYMKRNNRTMVPAEVLLVILRKYTE--KYLTHMQKFAKKKRIRVKTQL 130
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
+ A ++L+D L K VE A ++ + + + +++ +NIL+ GWC+ R K ++
Sbjct: 131 EINAFNLLLDALCKCCLVEDAESLYKKMRKTVKPNAETYNILVFGWCRVRNPTRGMKLLE 190
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG---CKPSVITYTIVMHALG 347
EM + G PD +Y I+ YC+ + D + M+ KG P+ TY I++ AL
Sbjct: 191 EMIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVALA 250
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
+ ++ + K+ M S CLPD + Y +I + G++ +A + E+M + P+++
Sbjct: 251 QHDRMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDIV 310
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
TYN + C + E+ALKL +M E C P +TY L+ M +
Sbjct: 311 TYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQEI 370
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI-VPY 510
D TY ++ GL K+E AC EE+I++G+ +PY
Sbjct: 371 DNRGCRPDTDTYCVMIEGLFNCNKMEDACFLLEEVINEGVKLPY 414
>gi|297839201|ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333323|gb|EFH63741.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 490
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 125/441 (28%), Positives = 211/441 (47%), Gaps = 16/441 (3%)
Query: 112 DKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL 171
D + +AL V ++ +V + L+R + AF FFTWA Q Y H P YN M+D+L
Sbjct: 8 DDMEKALDDSVVDLTTPVVCKILQRLQYEEKTAFRFFTWAGHQEHYSHEPIAYNEMIDIL 67
Query: 172 G----KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG 227
K+K+F ++ +++ M V + I+R+ RY V+ F K+
Sbjct: 68 SSTKYKNKQFRIVIDMLDYMKRNKKTVVPADILLEILRKYCE--RYLTHVQKFAKRKRIR 125
Query: 228 V--EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDA 285
V + + A ++L+D L K V+ + + + + FN+L GWC+ R A
Sbjct: 126 VKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDATTFNVLFFGWCRVRDPKKA 185
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC---KPSVITYTIV 342
K ++EM Q G P+ +Y I+ +C+ + D + M KG P+ T+ ++
Sbjct: 186 MKLLEEMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTFALM 245
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ AL K + E ++ +M S CLPD S Y +I + AG+V++A + ++M +G
Sbjct: 246 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGY 305
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+++TYN + C + + ALKL +M E C P +TY L+ M
Sbjct: 306 PPDIVTYNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFN 365
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI-VPYHSTYKMLEEKL 521
M + D D TY ++ GL + + + AC EE+++KG+ +PY + L +
Sbjct: 366 TWKEMDERDCVQDIETYCVMINGLFDCHRAKEACFLLEEVVNKGLKLPYRAFDSFL---M 422
Query: 522 EKKRLGNAKERINKLLAHAKE 542
+GN K I+KL H K+
Sbjct: 423 RLSTVGNLKA-IHKLSEHMKK 442
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/382 (29%), Positives = 188/382 (49%), Gaps = 9/382 (2%)
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDEL--NNGYVSLATMSTIMRRLVRGGRYDD 215
+HT Y T+VD L K+KK + E V M+++ N ++AT + ++ L + GR ++
Sbjct: 34 IHT---YTTIVDWLAKNKK---IQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 87
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIH 274
A++ R + G D + L+D L K AYK+F E + L + + LI
Sbjct: 88 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIR 147
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G + K+ A K M QG PDVV+ + I+ C+ K M+ +G P
Sbjct: 148 GLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 207
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ + Y+ ++H L KA++++ AL++ +MK C PDT Y+ LI L K+G V A F
Sbjct: 208 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFF 267
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M + G P+V TYN +IS C + A + M C P+ TY L+ C++
Sbjct: 268 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKR 327
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+++ + HM + D+ Y+SLV GL +SGKLE C F+EM G+ +
Sbjct: 328 RQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRT 387
Query: 515 KMLEEKLEKKRLGNAKERINKL 536
+++ + R+ A N +
Sbjct: 388 RLIFHLCKANRVDEAVSLFNAI 409
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/349 (27%), Positives = 172/349 (49%), Gaps = 12/349 (3%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM--STIMRRLVRGGRYDD 215
TP++ Y +++D LGK K+ ++L KEM ++L T+ + ++R L++ G+
Sbjct: 101 TPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRG---LALDTVCYTALIRGLLQAGKIPQ 157
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILI 273
A ++ M G D LS ++D L K + A ++F +E + P + +++ LI
Sbjct: 158 ASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP-NEVVYSALI 216
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
HG CK RK+D A + + +M + +PD ++Y I+ C+ D EM E GCK
Sbjct: 217 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCK 276
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P V TY I++ KA + A V++ M S C P+ Y +LI L K ++ A+
Sbjct: 277 PDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLY 336
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
++ MK++G P+ Y++++ C + E L +ME + +T L+ C+
Sbjct: 337 YQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIFHLCK 395
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
R+ L + K + Y S++ LI+SGK+ + ++EM
Sbjct: 396 ANRVDEAVSLFNAIRKEGMPHPY-AYNSIISALIKSGKVNEGQAVYQEM 443
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 131/284 (46%), Gaps = 35/284 (12%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
F+ILI+G K + A +E G + D+ +YT ++ + K ++ ++++
Sbjct: 2 FSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKIT 61
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK----- 383
GC P++ TY +++ L K ++ EA+ + K+ + C PD Y+SLI L K
Sbjct: 62 ANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSF 121
Query: 384 ------------------------------AGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
AG++ A+ +++ M QG VP+V+T +TMI
Sbjct: 122 EAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMI 181
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C A+++ + ME P+ Y+ L+ C+ ++M +L M K +
Sbjct: 182 DGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCT 241
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
D TY L+ GL +SG + A +FF+EM+ G P TY +L
Sbjct: 242 PDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNIL 285
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 105/198 (53%)
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
T++I+++ L KA + +A + ++ ++ C D Y++++ L+K ++++A + E +
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
G P + TYN +++ C E A+ LL+K+ ++ C PD TY L+ +KKR
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M +++D Y +L+RGL+++GK+ A S ++ M S+G VP T +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 518 EEKLEKKRLGNAKERINK 535
+ L K A RI K
Sbjct: 181 IDGLCKAGRIGAAVRIFK 198
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 98/201 (48%)
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+E GC + TYT ++ L K K+I EA+ + EK+ ++ C P + Y++L+ L K
Sbjct: 23 QETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKM 82
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
GR+++A ++ + G P+V+TY ++I + A KL ++M D Y
Sbjct: 83 GRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCY 142
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L++ + ++ + + M D T ++++ GL ++G++ A F+ M +
Sbjct: 143 TALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEA 202
Query: 505 KGIVPYHSTYKMLEEKLEKKR 525
+G+ P Y L L K R
Sbjct: 203 RGLAPNEVVYSALIHGLCKAR 223
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 121/447 (27%), Positives = 211/447 (47%), Gaps = 6/447 (1%)
Query: 86 SRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAF 145
S L + + V +I KIL K ++ E L + +V + L++ ++ A
Sbjct: 52 STALDGSKDVHVSEIVKIL-KSRDGDSELAEVLNQFADEMDEDVVLKVLQKQRSNWKVAL 110
Query: 146 GFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD-ELNNGYVSLATMSTIM 204
FF WA Y H Y M+D+LG+ KK LM +L E+ E V+ + ++
Sbjct: 111 SFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPVESRQSVVTNRMFAVLL 170
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL 264
R + +A++ F K YG E D +L+ +L + VE A +FL+ KD P
Sbjct: 171 NRYAGAHKVQEAIDMFYKRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFLQKKDEFPP 230
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ +NI+++GWC + DA++ E+ PD+ +Y FI +
Sbjct: 231 VIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLF 290
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
M EKG P V ++ L K+I EAL+++ +M C D + Y++LI K
Sbjct: 291 TSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKI 350
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
R++ E+ +DM+ +GV PN +TY+ ++ + + ++ + L+Q+ME+ C+ D +TY
Sbjct: 351 NRMEKVYELLDDMEVKGVSPNNMTYSYILKTT---EKPKDVISLMQRMEKSGCRLDSDTY 407
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
+L + K + + M +N D ++ +V GL KL+ A ++ M S
Sbjct: 408 NLILNLYVSWDYEKGVQLVWDEMERNGSGPDQRSFTIMVHGLHSHDKLDEALHYYRTMES 467
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKE 531
+G+ P T K+L + + K+ A E
Sbjct: 468 RGMTPEPRT-KLLVKAIRMKKDEPATE 493
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 114/383 (29%), Positives = 201/383 (52%), Gaps = 7/383 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++D L K + + + EM + G A T ++I+ L G+ ++A F+
Sbjct: 236 YNTIIDSLCKDRLVNDAMDFLSEM--VGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKR 293
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
M++ G + D ++++D+L K V A E D IP + ++HG C +
Sbjct: 294 MEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQ 353
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+++A + K+M Q+G PDVV+Y I+ C+++ + L EM ++G P+ +TY+
Sbjct: 354 LNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H Q++EA +++++M + +P+T +S L+ L + G V +A +FE M ++G
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V PN+ TYN +++ C R + A K+ + M C PD +Y L+ C +RM
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAK 533
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LLT M ++ + TY ++++GL G+L A F++M S G++P TY +L L
Sbjct: 534 ALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGL 593
Query: 522 EKKRLGNAKERINKLLAHAKEQK 544
K G+ E + KL KE+K
Sbjct: 594 CKH--GHLDEAL-KLFKSMKEKK 613
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 179/356 (50%), Gaps = 10/356 (2%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
+ K K++ + L +MD + ++ +++ ++ L R D AV + M K G++
Sbjct: 103 IAKMKQYSTVVYLCNQMDLFGVTH-TVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQP 161
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ-----IFNILIHGWCKTRKVDDA 285
D + TL+ G E KV +E + + S +N LI+G C + + A
Sbjct: 162 DV----ITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMA 217
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
K+M Q G P+VV+Y I+ C+++ D L EM +G P ITY ++H
Sbjct: 218 VHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHG 277
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
L Q+NEA +++++M+ + C PD Y+ +I L K V DA + +M QG+ P+
Sbjct: 278 LCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPD 337
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
V+TY T++ C + A++L +KME+ CKPD Y ++ C+ + + L+
Sbjct: 338 VVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLS 397
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M + +A TY++++ G G+L+ A F+EM+ + ++P T+ +L + L
Sbjct: 398 EMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGL 453
Score = 169 bits (427), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 130/502 (25%), Positives = 234/502 (46%), Gaps = 22/502 (4%)
Query: 43 TESPSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISK 102
T++PSLP F S S + V +LA + R+N + I + I+K
Sbjct: 52 TKNPSLPKKNGGFASNSSNTISVDDALASFYRMARMNPRPSIVE------FGKFLGSIAK 105
Query: 103 ILSKQYQSPDKVVEALKGCGVSVS----NSLVEQTLRRFSNDLTPAFGFFTWAKT-QTGY 157
+ KQY + + + GV+ + N L+ R D F W K + G
Sbjct: 106 M--KQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVD----FAVSVWGKMFKLGI 159
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDA 216
+ T+++ + K + EL EM + +G+ + + +T++ L G + A
Sbjct: 160 QPDVITFTTLINGVCNEGKIKVAVELYNEM--VRSGHEPDVISYNTLINGLCNSGNTNMA 217
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHG 275
V F+ M++ G + + + ++D+L K V A E IP + +N ++HG
Sbjct: 218 VHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHG 277
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
C ++++A + K M Q G PDVV+Y I+ +++ D L EM ++G P
Sbjct: 278 LCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPD 337
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+TYT ++H L Q+NEA+++++KM+ C PD Y+++I L K V DA E
Sbjct: 338 VVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLS 397
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M +G+ PN +TY+T++ C + + A +L ++M P+ T++ L+ C++
Sbjct: 398 EMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEG 457
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP-YHSTY 514
+ ++ M + V + TY +L+ G K+ A FE M+ KG P HS
Sbjct: 458 MVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYN 517
Query: 515 KMLEEKLEKKRLGNAKERINKL 536
++ +R+ AK + ++
Sbjct: 518 ILINGYCNSRRMDKAKALLTQM 539
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/367 (27%), Positives = 181/367 (49%), Gaps = 4/367 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++D L K + + + EM ++ G + T +TI+ L G+ ++A+ F+
Sbjct: 306 YNIIIDSLYKDRLVNDAADFLSEM--VDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKK 363
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
M++ G + D A + ++D+L K V A + E D IP ++ ++ ++HG+C +
Sbjct: 364 MEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQ 423
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A + KEM + P+ ++++ ++ C+E + + M EKG +P++ TY
Sbjct: 424 LDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNA 483
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+M+ ++NEA KV+E M C PD Y+ LI + R+ A + M +
Sbjct: 484 LMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKK 543
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PN +TYNT++ C +A +L +KM P TY+ LL C+ +
Sbjct: 544 LTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEAL 603
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M + + D Y L+ G+ GKLE+A F ++ + GI P TY ++ + L
Sbjct: 604 KLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGL 663
Query: 522 EKKRLGN 528
K+ L +
Sbjct: 664 LKEGLSD 670
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 122/315 (38%), Gaps = 78/315 (24%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++D L K + E + EM ++ G A T STI+ G+ D+A + F+
Sbjct: 376 YNTIIDSLCKDRLVNDAMEFLSEM--VDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKE 433
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--------------------------- 255
M V +T S+L+D L + V A VF
Sbjct: 434 MVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCK 493
Query: 256 ----------LEFKDCIPLSSQIFNILIHGWCKTRKVD---------------------- 283
+ K C P +NILI+G+C +R++D
Sbjct: 494 MNEARKVFEIMVGKGCAP-DLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYN 552
Query: 284 -------------DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
DAQ+ K+M G P +++Y+ + C+ + K M+EK
Sbjct: 553 TIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEK 612
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
+P +I YTI++ + ++ A ++ K+ +D P Y+ +I L K G +A
Sbjct: 613 KLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEA 672
Query: 391 NEIFE--DMKKQGVV 403
E+F M K V+
Sbjct: 673 YELFRKWKMMKHNVI 687
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 182 bits (461), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 182/361 (50%), Gaps = 2/361 (0%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKTQ-TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
+LV L+R N A FF + Y+H ++ +D+ + +W L+
Sbjct: 57 NLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHR 116
Query: 187 MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
M L G S T + + R G+ D AV+ F M ++G +D + + ++D L K
Sbjct: 117 MRSLRIG-PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSK 175
Query: 247 SVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
VE AY++F + + + +N++++GWC ++ A + +KEM ++G +P++ +Y
Sbjct: 176 RVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNT 235
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
++ + R R + EM+++ C+ V+TYT V+H G A +I A V+++M +
Sbjct: 236 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 295
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
LP + Y+++I +L K V++A +FE+M ++G PNV TYN +I E
Sbjct: 296 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 355
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+L+Q+ME + C+P+ +TY +++ ++ L M D + TY L+ G+
Sbjct: 356 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 415
Query: 487 I 487
Sbjct: 416 F 416
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 128/263 (48%), Gaps = 5/263 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++DVL KSK+ +EL + + V T + I+ R A+E + M
Sbjct: 164 FNTILDVLCKSKRVEKAYELFRALR--GRFSVDTVTYNVILNGWCLIKRTPKALEVLKEM 221
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRK 281
+ G+ + + ++ + + HA++ FLE K DC + + ++HG+ +
Sbjct: 222 VERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC-EIDVVTYTTVVHGFGVAGE 280
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ A+ EM ++G P V +Y I+ C++ + +EM +G +P+V TY +
Sbjct: 281 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 340
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L A + + ++ ++M+++ C P+ Y+ +I S+ V+ A +FE M
Sbjct: 341 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 400
Query: 402 VVPNVLTYNTMISSACARSEEEN 424
+PN+ TYN +IS R E+
Sbjct: 401 CLPNLDTYNILISGMFVRKRSED 423
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 120/256 (46%), Gaps = 1/256 (0%)
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
I S + F I+ + K D A K M + G D+ S+ ++ C+ K K
Sbjct: 122 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 181
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ + ++ + +V TY ++++ K+ +AL+V ++M P+ + Y++++
Sbjct: 182 ELFRALRGRFSVDTV-TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKGF 240
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+AG+++ A E F +MKK+ +V+TY T++ E + A + +M + P
Sbjct: 241 FRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 300
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY ++++ C+K ++ + M + + TY L+RGL +G+ +
Sbjct: 301 ATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 360
Query: 502 MISKGIVPYHSTYKML 517
M ++G P TY M+
Sbjct: 361 MENEGCEPNFQTYNMM 376
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 113/225 (50%), Gaps = 1/225 (0%)
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D S+ I+ R V + M+ PS T+ IV A + ++A+K++
Sbjct: 90 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 149
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
M C D + +++++ +L K+ RV+ A E+F ++ + V V TYN +++ C
Sbjct: 150 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILNGWCLI 208
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
AL++L++M E P+ TY +LK R +++ M K D +D TY
Sbjct: 209 KRTPKALEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 268
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
++V G +G+++ A + F+EMI +G++P +TY + + L KK
Sbjct: 269 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 313
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 233/456 (51%), Gaps = 10/456 (2%)
Query: 84 ISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRR--FSN-D 140
SS +++ +++ + +I++ S D + +L+ V +SN L++ L+R FS+ +
Sbjct: 29 FSSSTDNQSLHQNIETVFRIITTSSSSTD-MKHSLESSRVFLSNELIDGVLKRVRFSHGN 87
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
A FF + + G+ HT +TM+ +LG+S+KF +W+++ ++ + +SL T+
Sbjct: 88 PLQALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRTV 147
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
++ R+ + VE+FR KK+ E D + L+ TL + S+ A V+ K
Sbjct: 148 MVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKS 207
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
+ Q FNIL+ GW + ++A+ EM + G PDVVSY C ++ YC+ ++ K
Sbjct: 208 MFRPNLQTFNILLSGW---KSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKA 264
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+ +M+++ VITYT ++ LG Q ++A + ++MK C PD + Y++ I
Sbjct: 265 FKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRN 324
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
A R+ +A ++ ++M +G+ PN TYN ++ ++A L ++M + C P+
Sbjct: 325 FCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPN 384
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
++ L+++ + ++ ++ L M + L L + GKL A S F
Sbjct: 385 TQSCLFLVRLFKKYEKEEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFL 444
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
+M+ KG P ++++K ++ +E L N E + L
Sbjct: 445 QMVDKGHKPSYTSFKRIKVLME---LANKHEALQNL 477
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 233/456 (51%), Gaps = 10/456 (2%)
Query: 84 ISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRR--FSN-D 140
SS +++ +++ + +I++ S D + +L+ V +SN L++ L+R FS+ +
Sbjct: 29 FSSSTDNQSLHQNIETVFRIITTSSSSTD-MKHSLESSRVFLSNELIDGVLKRVRFSHGN 87
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
A FF + + G+ HT +TM+ +LG+S+KF +W+++ ++ + +SL T+
Sbjct: 88 PLQALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLRTV 147
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
++ R+ + VE+FR KK+ E D + L+ TL + S+ A V+ K
Sbjct: 148 MVVLGRIAKVCSVRQTVESFRKFKKFVPEFDVTCFNALLRTLCQEKSMMDARNVYHGLKS 207
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
+ Q FNIL+ GW + ++A+ EM + G PDVVSY C ++ YC+ ++ K
Sbjct: 208 MFRPNLQTFNILLSGW---KSSEEAEGFFDEMIEMGVKPDVVSYNCLVDVYCKNREMDKA 264
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+ +M+++ VITYT ++ LG Q ++A + ++MK C PD + Y++ I
Sbjct: 265 FKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAYNATIRN 324
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
A R+ +A ++ ++M +G+ PN TYN ++ ++A L ++M + C P+
Sbjct: 325 FCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMDTGCLPN 384
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
++ L+++ + ++ ++ L M + L L + GKL A S F
Sbjct: 385 TQSCLFLVRLFKKYEKEEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLIEAESCFL 444
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
+M+ KG P ++++K ++ +E L N E + L
Sbjct: 445 QMVDKGHKPSYTSFKRIKVLME---LANKHEALQNL 477
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 194/379 (51%), Gaps = 5/379 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +V+ L K++ +E++KEM + + L T ST++ + G D A E R M
Sbjct: 44 YNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREM 103
Query: 224 -KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRK 281
+ G+ D + ++D L + ++ A ++ E K + F+ LI GWC RK
Sbjct: 104 VTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARK 163
Query: 282 VDDAQKAMKEMF-QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
VD+A K KE+ + PDVV+YT I+ +C+ + K L M+ + C P+V+TY+
Sbjct: 164 VDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYS 223
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++H L KA +++AL ++ +M S C+P+ Y++LI L A +V A + ++M
Sbjct: 224 SLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTAT 283
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
P+ ++YN ++ C E A +L ++M C PD TY L++ C R++
Sbjct: 284 CCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEA 343
Query: 461 NFLLTHM-FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
FLL +M + D TY+ +V G + + A F +EMI++ + P TY L +
Sbjct: 344 RFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLID 403
Query: 520 KLEKK-RLGNAKERINKLL 537
L K R+ +A E + ++
Sbjct: 404 GLCKAGRVDHAMEVLKNMV 422
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 175/353 (49%), Gaps = 14/353 (3%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T S+++ L + G D A++ FR M G + + L+ L + V+ A +
Sbjct: 218 NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLM 277
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E C P + +N L+ G+C+ ++++A++ KEM + PD ++YTC + +C
Sbjct: 278 DEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNA 337
Query: 315 KDFRKVDDTLKEMQ-EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ L+ M+ G P V+TY+IV+ +AK+ EA + ++M + + P+
Sbjct: 338 SRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVT 397
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
YSSLI L KAGRV A E+ ++M + V P+V T+N++I + C + + A KLL M
Sbjct: 398 YSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMA 457
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM---------FKNDVSMDAGTYASLVR 484
+P TY LL+ R RM++ L M N V A +++L+R
Sbjct: 458 AHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQA--FSALIR 515
Query: 485 GLIESGKLELACSFFEEMISKGIVPY-HSTYKMLEEKLEKKRLGNAKERINKL 536
GL ++ +++ A + EE+ S+ P +++ L R A + IN +
Sbjct: 516 GLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSI 568
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 165/379 (43%), Gaps = 75/379 (19%)
Query: 236 SVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEM--- 292
++++D K N ++ A F + ++ + + + +N++++G CK R A + +KEM
Sbjct: 11 TIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDG 70
Query: 293 ----------------------------------FQQGFSPDVVSYTCFIEHYCREKDFR 318
+ G +PDVV+YT ++ CR+
Sbjct: 71 KSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMD 130
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK----------------- 361
+ + ++EM+ KG +P T++ ++ A++++EALK+Y++
Sbjct: 131 RACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTAL 190
Query: 362 -------------------MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
M+ C+P+ YSSL+ L KAG + A ++F M +G
Sbjct: 191 IDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGC 250
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
VPNV+TY T+I CA + + A L+ +M C PD +Y LL CR R++
Sbjct: 251 VPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQ 310
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM-ISKGIVPYHSTYKMLEEKL 521
L M D TY LVRG + +LE A E M + GI P TY ++
Sbjct: 311 LFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGY 370
Query: 522 EK-KRLGNAKERINKLLAH 539
+ KR A E I +++A
Sbjct: 371 SRAKRFVEAAEFIQEMIAR 389
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 37/256 (14%)
Query: 299 PDVVSYTCFIEHYCREKDFR----------------------------------KVDDTL 324
P VV++T I+ +C+ + K + L
Sbjct: 5 PTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAYEVL 64
Query: 325 KEMQE-KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL-PDTSFYSSLIFILS 382
KEM++ K P ++TY+ V++ K +++ A ++ +M + D + PD Y+S++ L
Sbjct: 65 KEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLC 124
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK-MEEDLCKPDC 441
+ G++ A E+ +MK +GV P+ T++ +I+ C + + ALKL ++ + KPD
Sbjct: 125 RDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDV 184
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ C+ ++ +L M + TY+SL+ GL ++G L+ A F
Sbjct: 185 VTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRR 244
Query: 502 MISKGIVPYHSTYKML 517
M SKG VP TY L
Sbjct: 245 MTSKGCVPNVVTYTTL 260
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 99/175 (56%), Gaps = 3/175 (1%)
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C+P+V+T+TI++ KA Q+ +AL +EKM+ + P+ Y+ ++ L KA A
Sbjct: 3 CQPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAY 61
Query: 392 EIFEDMKK-QGVVPNVLTYNTMISSACARSEEENALKLLQKM-EEDLCKPDCETYAPLLK 449
E+ ++M+ + V P+++TY+T+I+ C + E + A ++L++M D PD TY ++
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
CR +M ++ M V D T+++L+ G + K++ A ++E+++
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILT 176
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 8/214 (3%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T S ++ R R+ +A E + M V + S L+D L K V+HA +V
Sbjct: 360 VVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLK 419
Query: 257 EFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ + S FN +I C+ +D+A K + M G P +V+YT +E + R
Sbjct: 420 NMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479
Query: 316 DFRKVDDTLKEMQEKGCKPSVI-------TYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+ + M++K K S ++ ++ L KA++I++A+ V E+++S +C
Sbjct: 480 RMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECE 539
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
P +++ L +AGR ++A ++ + K G+
Sbjct: 540 PAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
>gi|357450985|ref|XP_003595769.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484817|gb|AES66020.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 497
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 144/538 (26%), Positives = 263/538 (48%), Gaps = 68/538 (12%)
Query: 12 SQSHLQKHA--KIYYLCYLSCNPLCTTAESPSSTESPSLPSWIKFFDSQSPDEDFVIPSL 69
++S+LQ+HA K ++ N +SP+++E P+ PS Q+P
Sbjct: 3 TKSNLQQHASNKNTFMQKQQTNSHNLVQQSPNTSE-PTFPSSF----PQNPRNS------ 51
Query: 70 AGWVESHRLNEKSRISSRVLSENHETD--VDKISKILSKQYQSPDKVVE-ALKGCGVSVS 126
SSR L +H++ I +L + P + +E AL G+ +
Sbjct: 52 ---------------SSRFLHSHHDSPPLASFIQNLLKFRRDKPTEQIEQALNLIGIHPN 96
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
N+LV Q L+R +D PAF FF W Y + E+YN ++++LGK K F + +++ E
Sbjct: 97 NNLVLQVLQRHRSDWKPAFIFFKWVSKTNNYTPSCEVYNEIINILGKMKCFEELHQVLDE 156
Query: 187 MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV--EKDTRALSVLMDTLVK 244
M + +++ T ++RR V + ++A+ F +++G+ E D++A L+ + +
Sbjct: 157 MSQ-RKEFINEETFCILIRRFVAAHKLEEAINIFYRREEFGLDNELDSKAFRTLLMWMCR 215
Query: 245 GNSVEHAYKVFL----EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
+E A +F +F+ C + + +N++++GWC +A++ K D
Sbjct: 216 YKHIEEAETLFHRNLNKFRFCRDIKT--WNVILNGWCVLGNTHEAKRLWK---------D 264
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLK-EMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+++Y C K+ + ++ +++E+ CKP V+ + ++ L K+I EAL+V+
Sbjct: 265 IIAYKC--------KEIGNCFEVVQWDVEEESCKPDVVIFNCLIDGLCFKKRIPEALQVF 316
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG--VVPNVLTYNTMISSAC 417
MK DCLP+ + Y+SLI L K R++ E+ EDM+++ +PN +TY+ ++ S
Sbjct: 317 HDMKERDCLPNVATYNSLIKHLFKIRRMEKVYELVEDMERRSGDCLPNGVTYSYLLQSLK 376
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
A E +L++ME + C + +L++ + + L M +N + D
Sbjct: 377 A---PEEVPAVLERMERNGCAMSDDICNLILRLYMKWDDLDGLRKTWDEMERNGLGPDRR 433
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
+Y ++ G E+G+ + A +F+EM SKGIV T EKL G KER K
Sbjct: 434 SYTIMIHGHYENGRTKDAMRYFQEMTSKGIVLEPRT-----EKLVISMNGQLKERTEK 486
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 181 bits (458), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/365 (30%), Positives = 178/365 (48%), Gaps = 40/365 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +VD L K K WE+++EM L+ G V +L T ++++ L R R DA+ R
Sbjct: 151 YTILVDGLCKESKVAAAWEVLREM--LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRD 208
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTR 280
M G + L+D L K V+ A + + D P I+N+LI+G CK
Sbjct: 209 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTP-DLMIYNMLINGLCKAD 267
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+VD++ ++ G PDVV+Y+ I CR + L ++ +GC P VI Y+
Sbjct: 268 QVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYS 327
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L KA +++EA +YE M D C D YS+LI L KAGRV +A+ + M +
Sbjct: 328 TLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRM 387
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+ +TYN++I C + + A++L+++ME C P TY L+ CR +R
Sbjct: 388 GTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMER---- 443
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
++S L+ +F+EMI G++P H TY +L E
Sbjct: 444 --------------------------VDSAALD----YFQEMIDNGVIPDHITYSILLEG 473
Query: 521 LEKKR 525
L+K +
Sbjct: 474 LKKSK 478
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 106/361 (29%), Positives = 188/361 (52%), Gaps = 4/361 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+++D L K+ + EL + M + S+ T +T++ L R G+ + A+ F+ M
Sbjct: 13 YNSLIDGLCKNNEPDRAQELFEHMKSVECS-PSMVTYNTLLDGLFRTGKLERAMALFQEM 71
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKV 282
D + ++L+ L + +E A + F + D C P + +++LI G CK +V
Sbjct: 72 LDRR-SHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSP-NVITYSVLIDGLCKANRV 129
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A + ++ M +G SPDV++YT ++ C+E + L+EM + GC P+++TY +
Sbjct: 130 SQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSL 189
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+H L +A+++++AL + M C P+ Y +LI L K GRVKDA + DM +G
Sbjct: 190 LHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG 249
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+++ YN +I+ C + + ++ LL++ KPD TY+ ++ CR R+
Sbjct: 250 TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACR 309
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
LL ++ D Y++L+ GL ++GK++ A +E M G TY L + L
Sbjct: 310 LLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLC 369
Query: 523 K 523
K
Sbjct: 370 K 370
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 151/294 (51%), Gaps = 5/294 (1%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTR 280
M+ +G E + + L+D L K N + A ++F K +C P S +N L+ G +T
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSP-SMVTYNTLLDGLFRTG 59
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K++ A +EM + S DV+S+ + CR + ++M ++ C P+VITY+
Sbjct: 60 KLERAMALFQEMLDR-RSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYS 117
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+++ L KA ++++A+++ E MK+ C PD Y+ L+ L K +V A E+ +M
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G VPN++TYN+++ C +AL L++ M C P+ TY L+ C+ R+K
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+L M + D Y L+ GL ++ +++ + + +S GI P TY
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTY 291
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/266 (29%), Positives = 122/266 (45%), Gaps = 35/266 (13%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY------------ 339
M G P+VV+Y I+ C+ + + + + M+ C PS++TY
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 340 ----------------------TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
I++ L +A +I AL+ + KM D C P+ YS L
Sbjct: 61 LERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSVL 119
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L KA RV A E+ E MK +G P+V+TY ++ C S+ A ++L++M + C
Sbjct: 120 IDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGC 179
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P+ TY LL CR +R+ L+ M + + TY +L+ GL + G+++ AC+
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
+MI KG P Y ML L K
Sbjct: 240 MLADMIDKGGTPDLMIYNMLINGLCK 265
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 106/199 (53%), Gaps = 2/199 (1%)
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M++ GC+P+V+TY ++ L K + + A +++E MKS +C P Y++L+ L + G+
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
++ A +F++M + +V+++N +++ C + E AL+ +KM +D C P+ TY+
Sbjct: 61 LERAMALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYSV 118
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+ C+ R+ LL M S D TY LV GL + K+ A EM+ G
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 507 IVPYHSTYKMLEEKLEKKR 525
VP TY L L + R
Sbjct: 179 CVPNLVTYNSLLHGLCRAR 197
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 184/361 (50%), Gaps = 6/361 (1%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVE 218
+P YN ++D K +L+K+M E +G+V + T +T+M L + GR ++A+
Sbjct: 79 SPVTYNVIIDASCKRGMLEEACDLIKKMIE--DGHVPDVVTYNTVMDGLCKSGRVEEALL 136
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGW 276
F M++ G + R+ + ++ L + + ++ A +VF +E +D IP S + ILI G
Sbjct: 137 LFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD-IPPDSWSYGILIDGL 195
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
K K+++A K + M G +P V+Y I C + + K M+ KGC+PS
Sbjct: 196 AKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
T+ I++ A K +++EA ++ ++M D +PD YS+LI L RV DA + ED
Sbjct: 256 FTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M K+ P V+T NT+I C + A ++L M PD TY L+ CR +
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ LL+ M ++ + TY +LV GL ++ +L AC F +M S G P TY
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 435
Query: 517 L 517
L
Sbjct: 436 L 436
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 179/368 (48%), Gaps = 4/368 (1%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
H P++ YNT++D L KS + L EM+ L + + +TI+ L + + D A
Sbjct: 111 HVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGC-TPNRRSHNTIILGLCQQSKIDQA 169
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHG 275
+ F M+ + D+ + +L+D L K + AYK+F D I S+ +N++IHG
Sbjct: 170 CQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHG 229
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
C +D+A + K M +G P ++ I+ +C+ + LK M + G P
Sbjct: 230 MCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPD 289
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+TY+ ++ L ++++A + E M C P ++LI L KAGR+K+A E+ +
Sbjct: 290 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 349
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M G P+V+TYNT++ C + E A +LL M P+ TY L+ C+
Sbjct: 350 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
R+ + M + + + TY +L+ G +G+++ F EM+ GI P H Y
Sbjct: 410 RLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYG 469
Query: 516 MLEEKLEK 523
L +L K
Sbjct: 470 TLAAELCK 477
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/372 (27%), Positives = 177/372 (47%), Gaps = 4/372 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+G + Y +++ L + F EL +M+ S T + I+ + G
Sbjct: 38 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR-RGCPPSPVTYNVIIDASCKRGML 96
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNI 271
++A + + M + G D + +MD L K VE A +F E + C P + + N
Sbjct: 97 EEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTP-NRRSHNT 155
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+I G C+ K+D A + EM + PD SY I+ + + + M + G
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSG 215
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
PS +TY +V+H + A ++EAL++++ M+S C P ++ LI K G++ +A
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAF 275
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ + M G VP+V+TY+T+IS C+ + ++A LL+ M + CKP T L+
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C+ R+K +L M + S D TY +LV G +G+ E A +M+++G+ P
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 395
Query: 512 STYKMLEEKLEK 523
TY L L K
Sbjct: 396 VTYTALVSGLCK 407
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 172/338 (50%), Gaps = 4/338 (1%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPL 264
L + G+ +DA + F+ + GV T A + L+ L NS + A ++F + + C P
Sbjct: 20 LAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPP- 78
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
S +N++I CK +++A +K+M + G PDVV+Y ++ C+ +
Sbjct: 79 SPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLF 138
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
EM+ GC P+ ++ ++ L + +I++A +V+ +M++ D PD+ Y LI L+KA
Sbjct: 139 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKA 198
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G++ +A ++F M G+ P+ +TYN +I C + AL+L + M C+P T+
Sbjct: 199 GKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTF 258
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ C++ +M LL M + D TY++L+ GL +++ A E+M+
Sbjct: 259 NILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 318
Query: 505 KGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAK 541
+ P T L L K R+ A+E ++ +++ +
Sbjct: 319 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 166/384 (43%), Gaps = 74/384 (19%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y ++D L K+ K ++L + M L++G S T + ++ + D+A+E F+
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFRRM--LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---------------------- 260
M+ G ++L+D K ++ A+++ D
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305
Query: 261 ---------------CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
C P + N LIHG CK ++ +A++ + M G SPDVV+Y
Sbjct: 306 VDDARHLLEDMVKRQCKP-TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 364
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
+ +CR + + L +M +G P+V+TYT ++ L KA ++ EA V+ +MKS
Sbjct: 365 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
C P+ Y++LI AG+V ++F +M G+ P+ + Y T+ + C A
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L++L++ E L + + ++V Y V G
Sbjct: 485 LEILREGRES---------------------------LRSEAWGDEV------YRFAVDG 511
Query: 486 LIESGKLELACSFFEEMISKGIVP 509
L+++GK+E+A F +M+ G +P
Sbjct: 512 LLDAGKMEMALGFVRDMVRGGQLP 535
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 128/249 (51%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ ILI G K K++DA+ +++ G +P V+YT I C F + +M
Sbjct: 13 YGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+GC PS +TY +++ A K + EA + +KM D +PD Y++++ L K+GRV+
Sbjct: 73 RRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVE 132
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A +F +M++ G PN ++NT+I C +S+ + A ++ +ME PD +Y L+
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILI 192
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ ++ L M + ++ A TY ++ G+ + L+ A F+ M SKG
Sbjct: 193 DGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252
Query: 509 PYHSTYKML 517
P T+ +L
Sbjct: 253 PSRFTFNIL 261
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 105/197 (53%)
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M E+ P +Y I++ L KA ++N+A +++K+ P T Y+SLI L A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
DA E+F DM ++G P+ +TYN +I ++C R E A L++KM ED PD TY
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++ C+ R++ L M + + + ++ +++ GL + K++ AC F EM ++
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 507 IVPYHSTYKMLEEKLEK 523
I P +Y +L + L K
Sbjct: 181 IPPDSWSYGILIDGLAK 197
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 110/226 (48%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M ++ SPD SY I+ + D +++ G PS + YT ++H L A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++A +++ M C P Y+ +I K G +++A ++ + M + G VP+V+TYNT
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
++ C E AL L +ME C P+ ++ ++ C++ ++ + M D
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ D+ +Y L+ GL ++GKL A F M+ GI P TY ++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVV 226
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/361 (31%), Positives = 183/361 (50%), Gaps = 6/361 (1%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVE 218
+P YN M+D K +L+K+M E +G+V + T +T+M L + R ++A+
Sbjct: 79 SPVTYNVMIDASCKRGMLEEACDLIKKMIE--DGHVPDVVTYNTVMDGLCKSSRVEEALL 136
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGW 276
F M++ G + R+ + ++ L + + ++ A +VF +E KD IP S + ILI G
Sbjct: 137 LFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD-IPPDSWSYGILIDGL 195
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
K K+++A K + M G +P V+Y I C + + K M+ KGC+PS
Sbjct: 196 AKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSR 255
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
T+ I++ A K +++EA ++ ++M D +PD YS+LI L RV DA + ED
Sbjct: 256 FTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLED 315
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M K+ P V+T NT+I C + A ++L M PD TY L+ CR +
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ LL+ M ++ + TY +LV GL ++ +L AC F +M S G P TY
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 435
Query: 517 L 517
L
Sbjct: 436 L 436
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 106/368 (28%), Positives = 179/368 (48%), Gaps = 4/368 (1%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
H P++ YNT++D L KS + L EM+ L + + +TI+ L + + D A
Sbjct: 111 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGC-TPNRRSHNTIILGLCQQSKIDQA 169
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHG 275
+ F M+ + D+ + +L+D L K + AYK+F D I S+ +N++IHG
Sbjct: 170 CQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHG 229
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
C +D+A + K M +G P ++ I+ +C+ + LK M + G P
Sbjct: 230 MCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPD 289
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+TY+ ++ L ++++A + E M C P ++LI L KAGR+K+A E+ +
Sbjct: 290 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 349
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M G P+V+TYNT++ C + E A +LL M P+ TY L+ C+
Sbjct: 350 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
R+ + M + + + TY +L+ G +G+++ F EM+ GI P H Y
Sbjct: 410 RLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYG 469
Query: 516 MLEEKLEK 523
L +L K
Sbjct: 470 TLAAELCK 477
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/372 (27%), Positives = 178/372 (47%), Gaps = 4/372 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+G + Y +++ L + F EL +M+ S T + ++ + G
Sbjct: 38 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNR-RGCPPSPVTYNVMIDASCKRGML 96
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNI 271
++A + + M + G D + +MD L K + VE A +F E + C P + + N
Sbjct: 97 EEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTP-NRRSHNT 155
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+I G C+ K+D A + EM + PD SY I+ + + + M + G
Sbjct: 156 IILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSG 215
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
PS +TY +V+H + A ++EAL++++ M+S C P ++ LI K G++ +A
Sbjct: 216 ITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAF 275
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ + M G VP+V+TY+T+IS C+ + ++A LL+ M + CKP T L+
Sbjct: 276 RLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGL 335
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C+ R+K +L M + S D TY +LV G +G+ E A +M+++G+ P
Sbjct: 336 CKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNV 395
Query: 512 STYKMLEEKLEK 523
TY L L K
Sbjct: 396 VTYTALVSGLCK 407
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 172/338 (50%), Gaps = 4/338 (1%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPL 264
L + G+ +DA F+ + GV T A + L+ L NS + A ++F + + C P
Sbjct: 20 LAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPP- 78
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
S +N++I CK +++A +K+M + G PDVV+Y ++ C+ +
Sbjct: 79 SPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLF 138
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
EM+ GC P+ ++ ++ L + +I++A +V+ +M++ D PD+ Y LI L+KA
Sbjct: 139 NEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKA 198
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G++ +A ++F+ M G+ P+ +TYN +I C + AL+L + M C+P T+
Sbjct: 199 GKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTF 258
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ C++ ++ LL M + D TY++L+ GL +++ A E+M+
Sbjct: 259 NILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVK 318
Query: 505 KGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAK 541
+ P T L L K R+ A+E ++ +++ +
Sbjct: 319 RQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 356
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/384 (24%), Positives = 166/384 (43%), Gaps = 74/384 (19%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y ++D L K+ K ++L + M L++G S T + ++ + D+A+E F+
Sbjct: 188 YGILIDGLAKAGKLNEAYKLFQRM--LDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---------------------- 260
M+ G ++L+D K ++ A+++ D
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305
Query: 261 ---------------CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
C P + N LIHG CK ++ +A++ + M G SPDVV+Y
Sbjct: 306 VDDARHLLEDMVKRQCKP-TVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYN 364
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
+ +CR + + L +M +G P+V+TYT ++ L KA ++ EA V+ +MKS
Sbjct: 365 TLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSS 424
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
C P+ Y++LI AG+V ++F +M G+ P+ + Y T+ + C A
Sbjct: 425 GCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARA 484
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L++L++ E L + + ++V Y V G
Sbjct: 485 LEILREGRES---------------------------LRSEAWGDEV------YRFAVDG 511
Query: 486 LIESGKLELACSFFEEMISKGIVP 509
L+E+GK+E+A F +M+ G +P
Sbjct: 512 LLEAGKMEMALGFVRDMVRGGQLP 535
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 127/249 (51%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ ILI G K K++DA+ +++ G +P V+YT I C F + +M
Sbjct: 13 YGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMN 72
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+GC PS +TY +++ A K + EA + +KM D +PD Y++++ L K+ RV+
Sbjct: 73 RRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVE 132
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A +F +M++ G PN ++NT+I C +S+ + A ++ +ME PD +Y L+
Sbjct: 133 EALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILI 192
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ ++ L M + ++ A TY ++ G+ + L+ A F+ M SKG
Sbjct: 193 DGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCR 252
Query: 509 PYHSTYKML 517
P T+ +L
Sbjct: 253 PSRFTFNIL 261
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 105/197 (53%)
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M E+ P +Y I++ L KA ++N+A +++K+ P T Y+SLI L A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
DA E+F DM ++G P+ +TYN MI ++C R E A L++KM ED PD TY
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++ C+ R++ L M + + + ++ +++ GL + K++ AC F EM +K
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 507 IVPYHSTYKMLEEKLEK 523
I P +Y +L + L K
Sbjct: 181 IPPDSWSYGILIDGLAK 197
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 112/226 (49%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M ++ SPD SY I+ + + +++ G PS + YT ++H L A
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++A +++ M C P Y+ +I K G +++A ++ + M + G VP+V+TYNT
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
++ C S E AL L +ME C P+ ++ ++ C++ ++ + M D
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ D+ +Y L+ GL ++GKL A F+ M+ GI P TY ++
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVV 226
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 181/361 (50%), Gaps = 2/361 (0%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKTQ-TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
+LV L+R N A FF + Y+H ++ +D+ + +W L+
Sbjct: 51 NLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHLHPTVWSLIHR 110
Query: 187 MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
M L G S T + + R G+ D AV+ F M ++G +D + + ++D L K
Sbjct: 111 MRSLRIG-PSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSK 169
Query: 247 SVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
VE AY++F + + + +N++++GWC ++ + +KEM ++G +P++ +Y
Sbjct: 170 RVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNT 229
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
++ + R R + EM+++ C+ V+TYT V+H G A +I A V+++M +
Sbjct: 230 MLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREG 289
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
LP + Y+++I +L K V++A +FE+M ++G PNV TYN +I E
Sbjct: 290 VLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGE 349
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+L+Q+ME + C+P+ +TY +++ ++ L M D + TY L+ G+
Sbjct: 350 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLDTYNILISGM 409
Query: 487 I 487
Sbjct: 410 F 410
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 127/263 (48%), Gaps = 5/263 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++DVL KSK+ +EL + + V T + I+ R +E + M
Sbjct: 158 FNTILDVLCKSKRVEKAYELFRALR--GRFSVDTVTYNVILNGWCLIKRTPKTLEVLKEM 215
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRK 281
+ G+ + + ++ + + HA++ FLE K DC + + ++HG+ +
Sbjct: 216 VERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDC-EIDVVTYTTVVHGFGVAGE 274
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ A+ EM ++G P V +Y I+ C++ + +EM +G +P+V TY +
Sbjct: 275 IKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNV 334
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L A + + ++ ++M+++ C P+ Y+ +I S+ V+ A +FE M
Sbjct: 335 LIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGD 394
Query: 402 VVPNVLTYNTMISSACARSEEEN 424
+PN+ TYN +IS R E+
Sbjct: 395 CLPNLDTYNILISGMFVRKRSED 417
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 119/256 (46%), Gaps = 1/256 (0%)
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
I S + F I+ + K D A K M + G D+ S+ ++ C+ K K
Sbjct: 116 IGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKAY 175
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ + ++ + +V TY ++++ K+ + L+V ++M P+ + Y++++
Sbjct: 176 ELFRALRGRFSVDTV-TYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKGF 234
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+AG+++ A E F +MKK+ +V+TY T++ E + A + +M + P
Sbjct: 235 FRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPSV 294
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY ++++ C+K ++ + M + + TY L+RGL +G+ +
Sbjct: 295 ATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQR 354
Query: 502 MISKGIVPYHSTYKML 517
M ++G P TY M+
Sbjct: 355 MENEGCEPNFQTYNMM 370
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 112/225 (49%), Gaps = 1/225 (0%)
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D S+ I+ R V + M+ PS T+ IV A + ++A+K++
Sbjct: 84 DASSFDLAIDIAARLHLHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASAGKPDKAVKLF 143
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
M C D + +++++ +L K+ RV+ A E+F ++ + V V TYN +++ C
Sbjct: 144 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTV-TYNVILNGWCLI 202
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
L++L++M E P+ TY +LK R +++ M K D +D TY
Sbjct: 203 KRTPKTLEVLKEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTY 262
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
++V G +G+++ A + F+EMI +G++P +TY + + L KK
Sbjct: 263 TTVVHGFGVAGEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKK 307
>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
Length = 700
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 126/469 (26%), Positives = 222/469 (47%), Gaps = 40/469 (8%)
Query: 67 PSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSK---------------QYQSP 111
P+ G+ S L +++ S+ L E V+KI K + + Q +P
Sbjct: 126 PTKNGFNPSKSL--RAKASANALVVQQEDTVNKICKAIEEDQWECLQDNFLNSMAQDLNP 183
Query: 112 DKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL 171
D VV+ L D A FF WA Q GY H + Y TM+D+L
Sbjct: 184 DAVVKVLN-----------------LQTDAQNALRFFQWADKQEGYDHNTDAYFTMIDIL 226
Query: 172 GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK- 230
G++K F + L+++M + ++ + + + + R GR+ +++EAF MK+ G E
Sbjct: 227 GRAKMFTELQSLLQKM-QTQGREITRSMLHSFVMSYGRSGRFKESLEAFNLMKEMGYEPG 285
Query: 231 --DTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
DT SVL+ +LVK ++ A +F + + + ++ + +I + K++DA K
Sbjct: 286 LIDTAYNSVLV-SLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMK 344
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+ +M Q ++PDVV+YT I C+ K + L++M+E GC+P++ TY ++ L
Sbjct: 345 LLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLC 404
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
++ EAL++ M+ P+ Y+ L L K R+ A E+F + +G+ PN +
Sbjct: 405 AVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRV 464
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
TYNT+++ C S A+ +L++M ++ C PD TY L++ + ++ + M
Sbjct: 465 TYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEM 524
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ T L RGL G + A F+ M +G S Y +
Sbjct: 525 ENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYL 573
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/332 (25%), Positives = 157/332 (47%), Gaps = 3/332 (0%)
Query: 180 MWELVKEMDEL--NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
M + +K +D++ NN + T + ++ L + + A + M++ G E + +
Sbjct: 339 MEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNA 398
Query: 238 LMDTLVKGNSVEHAYK-VFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L+ L E A + V L + +P + + IL HG CK R++D A++ E +G
Sbjct: 399 LIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARG 458
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
P+ V+Y + YCR + D LKEM + C P +TYT ++ L + Q+ +AL
Sbjct: 459 LKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDAL 518
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+++++M++ + + L L++ G KDA+ + MK +G + Y I
Sbjct: 519 RMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCL 578
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
E E A LL +M P+ TY ++K CR+ R+ + +L M +N + D
Sbjct: 579 STAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDT 638
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIV 508
G+Y L++ G+ + A + + +G+V
Sbjct: 639 GSYNILIKEFHNQGRTQDADQLYATALERGVV 670
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 4/229 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ RG R +A++ + M + D + L+ LV+GN + A ++ E
Sbjct: 465 TYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEM 524
Query: 259 KD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
++ ++ NIL G + DA + M +GF+ Y I +
Sbjct: 525 ENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEM 584
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ L EM KG P++ TY ++ + ++++A + M + PDT Y+ L
Sbjct: 585 EEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNIL 644
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPN---VLTYNTMISSACARSEEE 423
I GR +DA++++ ++GVV N V+ + RS+EE
Sbjct: 645 IKEFHNQGRTQDADQLYATALERGVVLNPKPVIQEPDELPEGLVRSQEE 693
>gi|116789117|gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 122/419 (29%), Positives = 202/419 (48%), Gaps = 9/419 (2%)
Query: 92 NHETDVDKISKILSKQYQSP-DKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTW 150
N + +K+ I + P ++ AL CG S +LV++ LRR D AF F W
Sbjct: 103 NEGSGFNKVLSITKDLHSLPIEEARTALDDCGFIPSPNLVQKLLRRLQYDGKAAFRVFQW 162
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A +Q Y HT +Y+TM+ +LG +KF W L+++M E V+ T+ +++R
Sbjct: 163 AGSQPDYSHTVSVYHTMISILGVHRKFDKGWGLIRKMHE--RAMVNRQTLMIMIKRYAAA 220
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
A++ F M K+ + D+ L+ L + VE A ++ K C PL ++ FN
Sbjct: 221 HDARKAIKTFHAMDKFKLAADSDDFLCLLCALCRNMFVEEAEELIHFNKKCYPLETKSFN 280
Query: 271 ILIHGWCKT-RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
++++GWC V ++ +EM +PD SYT I + + F V EM++
Sbjct: 281 VILYGWCNIFVDVYQVKRLWEEMSNLCITPDAFSYTTVICCFSKAGKFYDVVRLYDEMKK 340
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
KG P++ Y V++ L K + + EAL ++ K++ P+ Y+ LI++L + + ++
Sbjct: 341 KGFTPNLKVYNAVIYVLSKERCVKEALNLFNKIREMGFHPNAVTYTYLIYLLCRTWKPEE 400
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL-KLLQKMEEDLCKPDCETYAPLL 448
A + M +G VP + Y+ E E A+ KL KM E+ C P ETY +
Sbjct: 401 AYSYLDKMIMEGFVPTIDIYHAFFRFV----ENEGAICKLFDKMFENGCAPTMETYIMSI 456
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ CC + L M K+ S D+ + L+ G + +GK E AC + EM G
Sbjct: 457 RRCCSWSDYENAFKLWNDMEKHWFSADSSIHYLLLNGFLLNGKPEEACKCYREMKVNGF 515
>gi|125541207|gb|EAY87602.1| hypothetical protein OsI_09013 [Oryza sativa Indica Group]
Length = 555
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/398 (27%), Positives = 190/398 (47%), Gaps = 7/398 (1%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLG---- 172
AL G ++ LV L R D AF FF WA Q GY H YN ++D+L
Sbjct: 102 ALDALGAELTTPLVADVLHRLRYDEKLAFRFFVWASHQGGYEHEAATYNDVIDILSGTRY 161
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT 232
K+++F ++ +++ M V + + I+R A + + +T
Sbjct: 162 KARQFGVLCDVLDHMKRRRTRSVPVDDLLGILRAYTEKHLTHLRKLAKKRRVRMRTPPET 221
Query: 233 RALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
AL+VL+D K V A VF K + +++ ++IL GWC+ R A K ++EM
Sbjct: 222 DALNVLLDAFCKSGMVREAEAVFSRVKRKLLGNAETYSILFFGWCRARDPKRAMKVLEEM 281
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC---KPSVITYTIVMHALGKA 349
Q +P+ +Y I+ +C + D + M+ +G P+ TY+I++ AL KA
Sbjct: 282 IQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKA 341
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
Q+ E ++ +M+ C+PD S Y LI + ++ A + ++M K G P+++TY
Sbjct: 342 GQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTY 401
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N + C + ++AL+L ++M E C+P TY L+ M + + M K
Sbjct: 402 NCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMDK 461
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
TY +++ GL +SG+ E A + +E+I++G+
Sbjct: 462 RGCHRAVDTYETMIDGLFDSGRTEDATTLLDEVINRGM 499
>gi|413938979|gb|AFW73530.1| ATP binding protein [Zea mays]
Length = 551
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 128/486 (26%), Positives = 228/486 (46%), Gaps = 19/486 (3%)
Query: 32 PLCTTAESPSSTESPSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLN-EKSRISSRVLS 90
PL T A +T S S PS+ ++ F +P+ RL+ E + + + +
Sbjct: 19 PLPTLA----ATHSHSPPSFRPLHPTRIQPLRFHLPN----PPVRRLSSEHAILPTHLQD 70
Query: 91 ENHETDVDKI-SKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT 149
E T D+I ++ +S + AL G ++ LV L R + AF FF
Sbjct: 71 ERFATLSDRIYDAVIKTGTESNEGTEAALDALGAELTTPLVADVLHRLRYEEKLAFRFFA 130
Query: 150 WAKTQTGYMHTPEMYNTMVDVLG----KSKKFCLMWELVKEMDELNNGYVSLATMSTIMR 205
WA Q GY H P YN ++D+L KS++F ++ ++ M + V + + I+R
Sbjct: 131 WASQQDGYSHEPTTYNDIIDILSGTRYKSRQFGVLCNVLDHMKRHGSRSVPVEGLLEILR 190
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS 265
A + + +T AL+VL+D K V+ A VF K + +
Sbjct: 191 AYTEKHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGN 250
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
++ ++ L GWC+ R A K ++EM Q +P+ +Y IE +C + + +
Sbjct: 251 AETYSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELFE 310
Query: 326 EMQEKG---CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
M+ +G P+ TY+I++ AL KA ++ E ++ M++ C+PD + Y LI +
Sbjct: 311 FMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMC 370
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
GR+ A + ++M + G P+++TYN ++ C+ ++AL+L ++M E C+P
Sbjct: 371 LVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADDALELCERMIEAHCEPSVH 430
Query: 443 TYAPLLKMCCR-KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ M + + L+ L M K TY ++ GL + G+ E A + +E
Sbjct: 431 TYNMLMMMFFEMGEAHRALDIWL-EMDKRGCQRAIDTYEIMIYGLFDCGETEYATALLDE 489
Query: 502 MISKGI 507
+I++ +
Sbjct: 490 VINRDM 495
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/396 (19%), Positives = 156/396 (39%), Gaps = 85/396 (21%)
Query: 87 RVLSENHETDVDKISKILSKQYQSPDK------VVEALKGCGVSVSNSLVEQTLRR--FS 138
R +E H T + K++K + ++P + +++A CG+ V ++R
Sbjct: 190 RAYTEKHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLG 249
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
N T + FF W + + KK + E + +M + +A
Sbjct: 250 NAETYSTLFFGWCRAR------------------DPKKAMKVLEEMIQMKHTPESFTYVA 291
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGV---EKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ + G +A E F M+ G+ + S+++ L K + +E +++
Sbjct: 292 AIES----FCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELL 347
Query: 256 LEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ + C+P + LI G C ++D A + + EM + GF PD+V+Y CF+ C
Sbjct: 348 SDMRTCGCMP-DVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLC- 405
Query: 314 EKDFRKVDDTLK--------------------------------------EMQEKGCKPS 335
R DD L+ EM ++GC+ +
Sbjct: 406 --SLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRA 463
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ TY I+++ L + A + +++ + D + +++ LS G + + + E
Sbjct: 464 IDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLGAIHRLSE 523
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
M+K YN +S A ++++ ++ L +K
Sbjct: 524 HMRK--------FYNVAMSRRFAITQKKKSIGLRRK 551
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 105/236 (44%), Gaps = 9/236 (3%)
Query: 294 QQGFSPDVVSYTCFIEHYC----REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
Q G+S + +Y I+ + + F + + L M+ G + + + +
Sbjct: 135 QDGYSHEPTTYNDIIDILSGTRYKSRQFGVLCNVLDHMKRHGSRSVPVEGLLEILRAYTE 194
Query: 350 KQINEALKVYEKMKSD-DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
K + K+ +K + P+T + L+ K G VK+A +F +K++ ++ N T
Sbjct: 195 KHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRK-LLGNAET 253
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y+T+ C + + A+K+L++M + P+ TY ++ C + L M
Sbjct: 254 YSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELFEFMR 313
Query: 469 KNDVSMD---AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+++ A TY+ ++ L ++ ++E +M + G +P +TYK L E +
Sbjct: 314 TEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGM 369
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 188/382 (49%), Gaps = 9/382 (2%)
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDEL--NNGYVSLATMSTIMRRLVRGGRYDD 215
+HT Y +VD L K+KK + + V M+++ N ++AT + ++ L + GR ++
Sbjct: 165 IHT---YTAIVDWLAKNKK---IQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 218
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIH 274
A++ R + G D + L+D L K AYK+F E + L + + LI
Sbjct: 219 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIR 278
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G + K+ A K M QG PDVV+ + I+ C+ K M+ +G P
Sbjct: 279 GLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP 338
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ + Y+ ++H L KA++++ AL++ +MK C PDT Y+ LI L K+G V+ A F
Sbjct: 339 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 398
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M + G P+V TYN ++S C + A + M C P+ TY L+ C++
Sbjct: 399 DEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKR 458
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+++ + HM + D+ Y+SLV GL +SGKLE C F+EM G+ +
Sbjct: 459 RQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRT 518
Query: 515 KMLEEKLEKKRLGNAKERINKL 536
+++ + R+ A N +
Sbjct: 519 RLIFHLCKANRVDEAVSLFNAI 540
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 188/407 (46%), Gaps = 38/407 (9%)
Query: 156 GYMHTPEMYNTMVDVLGKSKK-----------------------------FCLMWE---- 182
G+ H+ N ++DV ++K+ +CL E
Sbjct: 54 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113
Query: 183 --LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
+++EM+E SL T + ++ L + G+ A++ F G D + ++D
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173
Query: 241 TLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
L K ++ A + + C P + +N L++G CK ++++A ++++ G +
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTP-TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCT 232
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PDVV+YT I+ +EK + KEM +G + YT ++ L +A +I +A V
Sbjct: 233 PDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSV 292
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
Y+ M S C+PD S++I L KAGR+ A IF+ M+ +G+ PN + Y+ +I C
Sbjct: 293 YKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCK 352
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ + AL++L +M++ C PD TY L+ C+ ++ M + D T
Sbjct: 353 ARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYT 412
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
Y LV G ++G + AC F++M S P TY L L K+R
Sbjct: 413 YNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRR 459
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 174/377 (46%), Gaps = 38/377 (10%)
Query: 179 LMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
L WEL + + G+ S+ T + ++ R R+ +A + D +V
Sbjct: 40 LAWELFQCLSSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNV 99
Query: 238 LMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKT---------------- 279
L+ E A+ V E ++ + S + N+++HG CK+
Sbjct: 100 LITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTN 159
Query: 280 -------------------RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
+K+ DA M+++ G +P + +Y + C+ +
Sbjct: 160 GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 219
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
D L+++ + GC P V+TYT ++ LGK K+ EA K++++M + DT Y++LI
Sbjct: 220 IDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRG 279
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L +AG++ A+ +++ M QG VP+V+T +TMI C A+++ + ME P+
Sbjct: 280 LLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPN 339
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
Y+ L+ C+ ++M +L M K + D TY L+ GL +SG +E A +FF+
Sbjct: 340 EVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFD 399
Query: 501 EMISKGIVPYHSTYKML 517
EM+ G P TY +L
Sbjct: 400 EMLEAGCKPDVYTYNIL 416
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 137/267 (51%), Gaps = 1/267 (0%)
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N L+ + +T++ +A +K F PDV ++ I YC ++ + ++EM+E
Sbjct: 63 NALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEE 122
Query: 330 K-GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
G PS+ T+ +V+H L K+ ++ A+ +E ++ C D Y++++ L+K +++
Sbjct: 123 DYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQ 182
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
DA + E + G P + TYN +++ C E A+ LL+K+ ++ C PD TY L+
Sbjct: 183 DAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 242
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
++KR L M + +D Y +L+RGL+++GK+ A S ++ M S+G V
Sbjct: 243 DGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCV 302
Query: 509 PYHSTYKMLEEKLEKKRLGNAKERINK 535
P T + + L K A RI K
Sbjct: 303 PDVVTLSTMIDGLCKAGRIGAAVRIFK 329
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/329 (26%), Positives = 142/329 (43%), Gaps = 76/329 (23%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP++ Y +++D LGK K+ ++L KEM L + + ++R L++ G+ A
Sbjct: 232 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEM-ALRGLVLDTVCYTALIRGLLQAGKIPQAS 290
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHG 275
++ M G D LS ++D L K + A ++F +E + P + +++ LIHG
Sbjct: 291 SVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAP-NEVVYSALIHG 349
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
CK RK+D A + + +M + +PD ++Y I+ C+ D EM E GCKP
Sbjct: 350 LCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPD 409
Query: 336 VITYTIVMHALGKA-----------------------------------KQINEALKVYE 360
V TY I++ KA +Q+ +A ++
Sbjct: 410 VYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQ 469
Query: 361 KMKSDDCLPDTSFYSSL----------------------------------IFILSKAGR 386
MK C PD+ YSSL IF L KA R
Sbjct: 470 HMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVANSQTRTRLIFHLCKANR 529
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISS 415
V +A +F ++K+G +P+ YN++IS+
Sbjct: 530 VDEAVSLFNAIRKEG-MPHPYAYNSIIST 557
>gi|195655361|gb|ACG47148.1| ATP binding protein [Zea mays]
Length = 551
Score = 178 bits (452), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 128/484 (26%), Positives = 227/484 (46%), Gaps = 19/484 (3%)
Query: 32 PLCTTAESPSSTESPSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLN-EKSRISSRVLS 90
PL T A +T S S PS+ ++ F +P+ RL+ E + + + +
Sbjct: 19 PLPTLA----ATHSHSPPSFRPLHPTRIQPLRFHLPN----PPVRRLSSEHAILPTHLQD 70
Query: 91 ENHETDVDKI-SKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT 149
E T D+I ++ +S + AL G ++ LV L R + AF FF
Sbjct: 71 ERFATLSDRIYDAVIKTGTESNEGTEAALDALGAELTTPLVADVLHRLLYEEKLAFRFFA 130
Query: 150 WAKTQTGYMHTPEMYNTMVDVLG----KSKKFCLMWELVKEMDELNNGYVSLATMSTIMR 205
WA Q GY H P YN ++D+L KS++F ++ ++ M + V + + I+R
Sbjct: 131 WASQQDGYSHEPTTYNDIIDILSGTRYKSRQFGVLCNVLDHMKRHGSRSVPVEGLLEILR 190
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS 265
A + + +T AL+VL+D K V+ A VF K + +
Sbjct: 191 AYTEKHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGN 250
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
++ ++ L GWC+ R A K ++EM Q +P+ +Y IE +C + + +
Sbjct: 251 AETYSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELFE 310
Query: 326 EMQEKG---CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
M+ +G P+ TY+I++ AL KA ++ E ++ M++ C+PD + Y LI +
Sbjct: 311 FMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGMC 370
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
GR+ A + ++M + G P+++TYN ++ C+ ++AL+L ++M E C+P
Sbjct: 371 LVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLCSLRNADDALELCERMIEAHCEPSVH 430
Query: 443 TYAPLLKMCCR-KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ M + + L+ L M K TY ++ GL + G+ E A + +E
Sbjct: 431 TYNMLMMMFFEMGEAHRALDIWL-EMDKRGCQRAIDTYEIMIYGLFDCGETEYATALLDE 489
Query: 502 MISK 505
+I++
Sbjct: 490 VINR 493
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/396 (19%), Positives = 157/396 (39%), Gaps = 85/396 (21%)
Query: 87 RVLSENHETDVDKISKILSKQYQSPDK------VVEALKGCGVSVSNSLVEQTLRR--FS 138
R +E H T + K++K + ++P + +++A CG+ V ++R
Sbjct: 190 RAYTEKHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLG 249
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
N T + FF W + + KK + E + +M + +A
Sbjct: 250 NAETYSTLFFGWCRAR------------------DPKKAMKVLEEMIQMKHTPESFTYVA 291
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGV---EKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ + G +A E F M+ G+ + S+++ L K + +E +++
Sbjct: 292 AIES----FCSAGLVSEARELFEFMRTEGLTVSSPTAKTYSIMIVALAKADRMEECFELL 347
Query: 256 LEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ + C+P + LI G C ++D A + + EM + GF PD+V+Y CF+ C
Sbjct: 348 SDMRTCGCMP-DVTTYKDLIEGMCLVGRLDAAYRVLDEMGRAGFPPDIVTYNCFLNVLC- 405
Query: 314 EKDFRKVDDTLK--------------------------------------EMQEKGCKPS 335
R DD L+ EM ++GC+ +
Sbjct: 406 --SLRNADDALELCERMIEAHCEPSVHTYNMLMMMFFEMGEAHRALDIWLEMDKRGCQRA 463
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ TY I+++ L + A + +++ + D + +++ LS G + + + E
Sbjct: 464 IDTYEIMIYGLFDCGETEYATALLDEVINRDMKLSYKKFDAIMLRLSAVGNLGAIHRLSE 523
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
M+K YN +S A ++++ ++ L++K
Sbjct: 524 HMRK--------FYNVAMSRRFAITQKKKSIGLIRK 551
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 105/236 (44%), Gaps = 9/236 (3%)
Query: 294 QQGFSPDVVSYTCFIEHYC----REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
Q G+S + +Y I+ + + F + + L M+ G + + + +
Sbjct: 135 QDGYSHEPTTYNDIIDILSGTRYKSRQFGVLCNVLDHMKRHGSRSVPVEGLLEILRAYTE 194
Query: 350 KQINEALKVYEKMKSD-DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
K + K+ +K + P+T + L+ K G VK+A +F +K++ ++ N T
Sbjct: 195 KHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRK-LLGNAET 253
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y+T+ C + + A+K+L++M + P+ TY ++ C + L M
Sbjct: 254 YSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIESFCSAGLVSEARELFEFMR 313
Query: 469 KNDVSMD---AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+++ A TY+ ++ L ++ ++E +M + G +P +TYK L E +
Sbjct: 314 TEGLTVSSPTAKTYSIMIVALAKADRMEECFELLSDMRTCGCMPDVTTYKDLIEGM 369
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 119/427 (27%), Positives = 208/427 (48%), Gaps = 30/427 (7%)
Query: 97 VDKISKILSKQYQSPDKVVE-ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
+++IS+ILS ++ P +E L ++ LVEQ L+R N GF
Sbjct: 50 INEISRILS-DFRDPHHDLERPLTAFSQKITPGLVEQVLKRCKN-----LGFSA------ 97
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
H+ SK+F L+W+ + +M E + I R R D
Sbjct: 98 ---HS-------------SKQFPLIWDFLSDMRETRCCEICPEIFWLIFRAYCRANLPGD 141
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
A+ AF M +GV+ + L+ L K V+ A + F + + +++ ++IL+ G
Sbjct: 142 AIRAFHQMGDFGVKAGVGDVDQLLYVLCKRKHVKQAQEFFDKVNVEVMPNAKTYSILMRG 201
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
W +A+K +EM ++G + DVV+Y +E C+ + + +EM G P
Sbjct: 202 WGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVDEAYKLFREMGSNGLAPD 261
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+Y+I + A + I+ A +V ++M+ + +P+ Y+ ++ L K+ +V +A ++ +
Sbjct: 262 ACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIVKKLCKSEKVDEAYQLLD 321
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M ++GV P++ +YN + + C E AL+L+ +ME++ C PD TY +LKM R
Sbjct: 322 EMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCMPDRHTYNMVLKMLLRVG 381
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFFEEMISKGIVPYHSTY 514
R + + M + A TYA +V G + GKLE AC +FE MI GI PY T
Sbjct: 382 RFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEACKYFEMMIDDGIPPYSCTV 441
Query: 515 KMLEEKL 521
++L ++
Sbjct: 442 ELLRNRV 448
>gi|242063152|ref|XP_002452865.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
gi|241932696|gb|EES05841.1| hypothetical protein SORBIDRAFT_04g033840 [Sorghum bicolor]
Length = 551
Score = 178 bits (452), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 118/439 (26%), Positives = 209/439 (47%), Gaps = 10/439 (2%)
Query: 78 LNEKSRISSRVLSENHETDVDKI-SKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRR 136
+E + + + + E + T D+I ++ +S + AL G ++ LV L R
Sbjct: 58 FSEHTILPTHLQDERYATLSDRIYDAVIKTGAESNEGTEAALDALGTELTTPLVADVLHR 117
Query: 137 FSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLG----KSKKFCLMWELVKEMDELNN 192
+ AF FF WA Q GY H YN ++D+L KS++F ++ ++ M
Sbjct: 118 LRYEEKLAFRFFAWASHQDGYSHESATYNDIIDILSGTRYKSRQFGVLCNVLDHMKRHGT 177
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
V + + I+R A + + +T AL+VL+D K V+ A
Sbjct: 178 RSVPVEDLLEILRAYTEKHLTHMRKLAKKRRVRLRTPPETDALNVLLDAFCKCGMVKEAE 237
Query: 253 KVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
VF K + +++ ++IL GWC+ R A K ++EM Q +P+ +Y IE +C
Sbjct: 238 AVFGRVKRRLLGNAETYSILFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYIAAIESFC 297
Query: 313 REKDFRKVDDTLKEMQEKGC---KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
+ + + M+ +G P+ TY+I++ AL KA ++ E ++ M+S C+P
Sbjct: 298 SAGLVSEARELFEFMRTEGSTISSPTAKTYSIMIVALAKADRMEECFELLSDMRSCGCMP 357
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D S Y LI + G++ A + E+M + G P+++TYN ++ C+ + ++AL+L
Sbjct: 358 DVSTYKELIEGMCLVGKLDAAYRVLEEMGRAGFPPDIVTYNCFLNVLCSLRKADDALELC 417
Query: 430 QKMEEDLCKPDCETYAPLLKMCCR-KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
++M E C+P TY L+ M + + L+ L M TY ++ GL +
Sbjct: 418 ERMIEAHCEPSVHTYNMLMVMFFEMGEAHRALDIWL-EMDTRGCQRAIDTYEIMIDGLFD 476
Query: 489 SGKLELACSFFEEMISKGI 507
GK E A S +E+I++ +
Sbjct: 477 CGKTEHATSLLDEVINRDM 495
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 153/375 (40%), Gaps = 43/375 (11%)
Query: 87 RVLSENHETDVDKISKILSKQYQSPDK------VVEALKGCG-VSVSNSLVEQTLRRF-S 138
R +E H T + K++K + ++P + +++A CG V + ++ + RR
Sbjct: 190 RAYTEKHLTHMRKLAKKRRVRLRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRRLLG 249
Query: 139 NDLTPAFGFFTWAKTQ------------TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
N T + FF W + + HTPE + + + + FC LV E
Sbjct: 250 NAETYSILFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYIAAI----ESFCSAG-LVSE 304
Query: 187 MDEL-----NNGYV----SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
EL G + T S ++ L + R ++ E M+ G D
Sbjct: 305 ARELFEFMRTEGSTISSPTAKTYSIMIVALAKADRMEECFELLSDMRSCGCMPDVSTYKE 364
Query: 238 LMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L++ + ++ AY+V E + P +N ++ C RK DDA + + M +
Sbjct: 365 LIEGMCLVGKLDAAYRVLEEMGRAGFPPDIVTYNCFLNVLCSLRKADDALELCERMIEAH 424
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
P V +Y + + + + D EM +GC+ ++ TY I++ L + A
Sbjct: 425 CEPSVHTYNMLMVMFFEMGEAHRALDIWLEMDTRGCQRAIDTYEIMIDGLFDCGKTEHAT 484
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ +++ + D + +++ LS G + + + E M++ YN +S
Sbjct: 485 SLLDEVINRDMKLSYKKFDAIMLRLSAVGDLGAIHRLSEHMRR--------FYNVAMSRR 536
Query: 417 CARSEEENALKLLQK 431
A ++++ ++ L +K
Sbjct: 537 FAITQKKKSISLRRK 551
>gi|115448805|ref|NP_001048182.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|46805701|dbj|BAD17102.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497356|dbj|BAD19395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537713|dbj|BAF10096.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|125583759|gb|EAZ24690.1| hypothetical protein OsJ_08460 [Oryza sativa Japonica Group]
gi|215704115|dbj|BAG92955.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766866|dbj|BAG99094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 178 bits (451), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 127/488 (26%), Positives = 224/488 (45%), Gaps = 21/488 (4%)
Query: 32 PLCTTAESPSSTES-PSL-PSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRI--SSR 87
PL + A + S+ S P L P+ + P +P+L ++ RL + + +
Sbjct: 21 PLSSLAAAHSANRSSPRLNPTSVP-----PPPRQLHLPTL----QARRLCSTTHVVLPTN 71
Query: 88 VLSENHETDVDKI-SKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFG 146
+ E D+I ++ S + AL G ++ LV L R D AF
Sbjct: 72 LQDERFAALSDRIYDAVIETAAGSSEGTEAALDALGAELTTPLVADVLHRLRYDEKLAFR 131
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLG----KSKKFCLMWELVKEMDELNNGYVSLATMST 202
FF WA Q GY H YN ++D+L K+++F ++ +++ M V + +
Sbjct: 132 FFVWASHQDGYEHEAATYNDVIDILSGTRYKARQFGVLCDVLDHMKRRRTRSVPVDDLLG 191
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
I+R A + + +T AL+VL+D K V A VF K +
Sbjct: 192 ILRAYTEKHLTHLRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVREAEVVFSRVKRKL 251
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+++ ++IL GWC+ R A K ++EM Q +P+ +Y I+ +C + D
Sbjct: 252 LGNAETYSILFFGWCRARDPKRAMKVLEEMIQMKHTPENFTYNAAIDSFCSAGLVSEARD 311
Query: 323 TLKEMQEKGC---KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ M+ +G P+ TY+I++ AL KA Q+ E ++ +M+ C+PD S Y LI
Sbjct: 312 LFEFMRTEGSTISSPTAKTYSIMIAALAKAGQMEECFELISEMRKCGCMPDVSTYKDLIE 371
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+ ++ A + ++M K G P+++TYN + C + ++AL+L ++M E C+P
Sbjct: 372 GMLLVDKLDAAYCVLDEMAKAGFPPDIVTYNCFLKVLCGLQKADDALELCERMIEAHCEP 431
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
TY L+ M + + M K TY +++ GL +SG+ E A +
Sbjct: 432 SVHTYNMLMVMFFEMREPDRAINIWIEMDKRGCHRAVDTYETMIDGLFDSGRTEDATALL 491
Query: 500 EEMISKGI 507
+E+I++G+
Sbjct: 492 DEVINRGM 499
>gi|115460906|ref|NP_001054053.1| Os04g0643700 [Oryza sativa Japonica Group]
gi|38344884|emb|CAD41907.2| OSJNBa0033G05.8 [Oryza sativa Japonica Group]
gi|113565624|dbj|BAF15967.1| Os04g0643700 [Oryza sativa Japonica Group]
gi|125591829|gb|EAZ32179.1| hypothetical protein OsJ_16385 [Oryza sativa Japonica Group]
gi|215701473|dbj|BAG92897.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704877|dbj|BAG94905.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 112/385 (29%), Positives = 190/385 (49%), Gaps = 8/385 (2%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTG--YMHTPEMYNTMVDVLGKSKKFCLMWELVKEM 187
V +TL ++ND A FF W+ + G TP VDVLGK +F L L+
Sbjct: 36 VLETLSLYANDWRRALEFFHWSASPDGANVPPTPATVARAVDVLGKHFEFPLATSLLVSH 95
Query: 188 DELNNGYVSL--ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
+ S + +++ RL DDA+ AF +D + L+D L
Sbjct: 96 HDPGRADPSFLRPALRSLLNRLAAANLIDDAIRAFDSTAGSIGLRDEASFHALVDALCDH 155
Query: 246 NSVEHAYKV-FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
V+ A+ + F + P ++ +N+L+ GW KTR ++ +M +G + D+ SY
Sbjct: 156 RRVDEAHHLCFGKDPPPFPPVTKTYNLLLRGWAKTRAWARLRQLWFDMDSRGVAKDLHSY 215
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ +++ + K KEM++KG V+ Y +H++G A+ ++ A+++Y +M
Sbjct: 216 SIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQGVDFAIRLYRQMVD 275
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
C P+ S +++++ +L K GR K+ + M K G+ PNVLTY+ S +
Sbjct: 276 AGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHCFFQYL---SRPQE 332
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
L L +KM E C+P +TY L+K R ++ + + M K +S DA Y SL+
Sbjct: 333 VLGLFEKMLERGCRPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEKQGLSPDAFAYNSLID 392
Query: 485 GLIESGKLELACSFFEEMISKGIVP 509
L++ G ++LA + EEM+SKG+ P
Sbjct: 393 ALLQKGMVDLARKYDEEMLSKGLSP 417
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 179/361 (49%), Gaps = 2/361 (0%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKTQ-TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
+LV L+R N A FF + Y+H ++ +D+ + +W L+
Sbjct: 55 NLVNSVLKRLWNHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHIHPTVWSLIHR 114
Query: 187 MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
M L G S T + + R G+ D AV+ F M ++G +D + + ++D L K
Sbjct: 115 MRSLRIG-PSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSK 173
Query: 247 SVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
VE AY++F + + +N++++GWC ++ A + +KEM +G +P++ +Y
Sbjct: 174 RVEKAYELFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNT 233
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
++ + R R+ + EM+++ C+ V+TYT V+H G A +I V+++M +
Sbjct: 234 MLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREG 293
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
LP + Y++ I +L K V++A +FE+M ++G PNV TYN +I +
Sbjct: 294 VLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGE 353
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+L+Q+ME + C+P+ +TY +++ ++ L M D + TY L+ G+
Sbjct: 354 ELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGTGDCLPNLDTYNILISGM 413
Query: 487 I 487
Sbjct: 414 F 414
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 127/265 (47%), Gaps = 9/265 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS--TIMRRLVRGGRYDDAVEAFR 221
+NT++DVL KSK+ +EL + + G S T++ I+ R A+E +
Sbjct: 162 FNTILDVLCKSKRVEKAYELFRAL----RGRFSADTVTYNVIVNGWCLIKRTPKALEVLK 217
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKT 279
M G+ + + ++ + + A++ FLE K +C + + ++HG+
Sbjct: 218 EMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNC-EIDVVTYTTVVHGFGVA 276
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++ + EM ++G P V +Y FI+ C++ +EM KG +P+V TY
Sbjct: 277 GEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTY 336
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+++ L A + + ++ ++M+++ C P+ Y+ +I S+ V+ A +FE M
Sbjct: 337 NVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGT 396
Query: 400 QGVVPNVLTYNTMISSACARSEEEN 424
+PN+ TYN +IS R E+
Sbjct: 397 GDCLPNLDTYNILISGMFVRKRSED 421
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/225 (24%), Positives = 111/225 (49%), Gaps = 1/225 (0%)
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D S+ I+ R V + M+ PS T+ IV + + ++A+K++
Sbjct: 88 DASSFDLAIDIAARLHIHPTVWSLIHRMRSLRIGPSPKTFAIVAERYASSGKPDKAVKLF 147
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
M C D + +++++ +L K+ RV+ A E+F ++ + + +TYN +++ C
Sbjct: 148 LNMHEHGCFQDLASFNTILDVLCKSKRVEKAYELFRALRGR-FSADTVTYNVIVNGWCLI 206
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
AL++L++M + P+ TY +L+ R +++ M K + +D TY
Sbjct: 207 KRTPKALEVLKEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTY 266
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
++V G +G+++ + F+EMI +G++P +TY + L KK
Sbjct: 267 TTVVHGFGVAGEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKK 311
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 180/343 (52%), Gaps = 9/343 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ L + + +L + L GY + T + ++ L++ R ++A E F G
Sbjct: 261 YNALIHGLAREQGVSEALKLFGSV--LRQGYEPEVPTYNILIDGLLKEDRVNEAFELFSG 318
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
+ K+G+E D +V +D L K VE A + ++ K C+P N +I+G CK +
Sbjct: 319 LVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP-DVVSHNAVINGLCKEK 377
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+VD+A+ + M +G SP+ +S+ I CR ++K T KEM ++G KP+V+TY
Sbjct: 378 RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYN 437
Query: 341 IVMHALGKAKQ---INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
I++ L KA+Q I EA+ +++ M +PD YS+LI L KAG++ DA + M
Sbjct: 438 ILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM 497
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ +G +PNV TYN++IS C + + AL+L M E C PD TY ++ C+++ +
Sbjct: 498 EAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMV 557
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
L + V +G Y SL+ GL +++ A +
Sbjct: 558 DKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/384 (28%), Positives = 194/384 (50%), Gaps = 11/384 (2%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYD 214
G+ YN ++ L + L + M + GY + T +T++ + G+ D
Sbjct: 80 GFWPNRITYNALLSGLCNGGRMSDAQALYERM--IKAGYSPDVVTYNTLLHGFCKVGKLD 137
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNIL 272
+A++ F G K G D + L++ K + ++ A ++ + +P +N L
Sbjct: 138 EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP-DVVTYNSL 196
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE-KDFRKVDDTLKEMQEKG 331
++G CK +VD+A+ + +GFSP+V++Y+ I CRE + L++M G
Sbjct: 197 VNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNG 253
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
CKP +++Y ++H L + + ++EALK++ + P+ Y+ LI L K RV +A
Sbjct: 254 CKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAF 313
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
E+F + K G+ P+ +TY I C E+AL +L+ M+E C PD ++ ++
Sbjct: 314 ELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 373
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++KR+ LL+ M S +A ++ +L+ G +GK + A + F+EM+ +G+ P
Sbjct: 374 CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTV 433
Query: 512 STYKMLEEKLEKKRL-GNAKERIN 534
TY +L + L K R G KE I
Sbjct: 434 VTYNILVDGLCKARQEGRIKEAIT 457
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 183/381 (48%), Gaps = 17/381 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRG-GRYDDAVEAFR 221
YN++V+ L K+ + L+ ++ G+ ++ T ST++ L R R + A +
Sbjct: 193 YNSLVNGLCKNGRVDEARMLI-----VDKGFSPNVITYSTLISGLCRELRRLESARQLLE 247
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTR 280
M G + D + + L+ L + V A K+F + +NILI G K
Sbjct: 248 KMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKED 307
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+V++A + + + G PD ++YT FI+ C+ LK+M EKGC P V+++
Sbjct: 308 RVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHN 367
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
V++ L K K+++EA + M++ C P+ +++LI +AG+ K A F++M K+
Sbjct: 368 AVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR 427
Query: 401 GVVPNVLTYNTMISSACARSEE---ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
GV P V+TYN ++ C +E + A+ L M E PD TY+ L+ + ++
Sbjct: 428 GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKL 487
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + TY SL+ GL K++ A F M+ KG VP TY +
Sbjct: 488 DDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTI 547
Query: 518 EEKLEKKRLGNAKERINKLLA 538
L K +E ++K LA
Sbjct: 548 ISALCK------QEMVDKALA 562
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 155/317 (48%), Gaps = 11/317 (3%)
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLE---FKDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
D + +L+ +L+K +E A++ F+E K +S+ FNI I G C+ ++ DAQ
Sbjct: 15 DAYTVGILLRSLLKSGKIEKAHR-FVEQLLVKGLCDIST--FNIYISGLCRASRIGDAQT 71
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
M + GF P+ ++Y + C + M + G P V+TY ++H
Sbjct: 72 VFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFC 131
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
K +++EALK+++ +PD Y++LI KA ++ +A I + M + +VP+V+
Sbjct: 132 KVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVV 191
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK-KRMKVLNFLLTH 466
TYN++++ C + A L+ + P+ TY+ L+ CR+ +R++ LL
Sbjct: 192 TYNSLVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRRLESARQLLEK 248
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-R 525
M N D +Y +L+ GL + A F ++ +G P TY +L + L K+ R
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDR 308
Query: 526 LGNAKERINKLLAHAKE 542
+ A E + L+ H E
Sbjct: 309 VNEAFELFSGLVKHGLE 325
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/344 (29%), Positives = 177/344 (51%), Gaps = 7/344 (2%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
T +T++ L + R DDA+ M G + + + ++ K N VE+A +
Sbjct: 45 VTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQ 104
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ + C P + +I+G CK +VD+A + M +M Q+G P+V++Y ++ +CR
Sbjct: 105 MVMRGCPP-DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVG 163
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM-KSDDCLPDTSFY 374
D + +++M E+G +P+ ITY +MH L ++++ AL+++++M +S C PD Y
Sbjct: 164 DLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTY 223
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S+++ L K+G+V DA + E M +G PNV+TY++++ C + + A LLQ+M
Sbjct: 224 STIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTR 283
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C P+ TY ++ C+ R+ LL M + TY L+ + GK E
Sbjct: 284 SGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAED 343
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
A E M+ KG VP TY L + KK + ER +LL+
Sbjct: 344 AIGLVEVMVEKGYVPNLFTYNSLLDMFCKK---DEVERACQLLS 384
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 116/393 (29%), Positives = 203/393 (51%), Gaps = 9/393 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGR 212
Q G Y T+VD + ELV++M E GY A T + IM L G +
Sbjct: 142 QRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTE--RGYRPNAITYNNIMHGLCSGRK 199
Query: 213 YDDAVEAFRGMKKYG-VEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIF 269
D A++ F+ M++ G D S ++D+LVK V+ A ++ + K C P + +
Sbjct: 200 LDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP-NVVTY 258
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+ L+HG CK K+D+A ++ M + G SP++V+Y I+ +C+ + L+EM +
Sbjct: 259 SSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD 318
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
GC+P+V+TYT+++ A K + +A+ + E M +P+ Y+SL+ + K V+
Sbjct: 319 GGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVER 378
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A ++ M ++G VPNV++YNT+I+ C ++ + LL++M + C PD T+ ++
Sbjct: 379 ACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIID 438
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK-GIV 508
C+ R+ + L + ++ + + TY SLV GL +S + + A EM K G
Sbjct: 439 AMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCS 498
Query: 509 PYHSTYKMLEEKLEK-KRLGNAKERINKLLAHA 540
P TY + + L K KR+ A + ++L+
Sbjct: 499 PDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDG 531
Score = 168 bits (426), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 187/388 (48%), Gaps = 4/388 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
T+ GY YN ++ L +K +L KEM+E + + T STI+ LV+ G+
Sbjct: 176 TERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGK 235
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFN 270
DDA M G + S L+ L K ++ A + + C P + +N
Sbjct: 236 VDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP-NIVTYN 294
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+I G CK ++D+A ++EM G P+VV+YT ++ +C+ ++ M EK
Sbjct: 295 TIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEK 354
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P++ TY ++ K ++ A ++ M C+P+ Y+++I L KA +V +
Sbjct: 355 GYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEG 414
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ E M VP+++T+NT+I + C + A +L ++E C P+ TY L+
Sbjct: 415 VLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHG 474
Query: 451 CCRKKRMKVLNFLLTHMF-KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ +R +LL M K S D TY +++ GL +S +++ A F +M+S G+ P
Sbjct: 475 LCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAP 534
Query: 510 YHSTYKMLEEKLEKKRLGNAKERINKLL 537
TY ++ L K R + + +L+
Sbjct: 535 DDVTYSIVISSLCKWRFMDEANNVLELM 562
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 149/296 (50%), Gaps = 1/296 (0%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
M + G++ ++ L A F E P S +N +I+G K+ ++
Sbjct: 1 MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRL 60
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
DDA + ++EM GF+P+V SY + +C+ L++M +GC P V++YT V
Sbjct: 61 DDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTV 120
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ L K Q++EA +V +KM C P+ Y +L+ + G + A E+ M ++G
Sbjct: 121 INGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGY 180
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEED-LCKPDCETYAPLLKMCCRKKRMKVLN 461
PN +TYN ++ C+ + ++AL+L ++MEE C PD TY+ ++ + ++
Sbjct: 181 RPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDAC 240
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L+ M S + TY+SL+ GL ++GKL+ A + + M G P TY +
Sbjct: 241 RLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTI 296
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 124/474 (26%), Positives = 213/474 (44%), Gaps = 47/474 (9%)
Query: 93 HETDVDKISKILSKQYQSPDKVVEAL--KGCGVSVS--NSLVEQTLRRFSNDLTPAFGFF 148
+ T VD + K S + ++VEA+ KGC +V +SL+ + D A
Sbjct: 223 YSTIVDSLVK--SGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATAL--- 277
Query: 149 TWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLV 208
T++G YNT++D K + + L++EM + ++ T + ++
Sbjct: 278 LQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD-GGCQPNVVTYTVLLDAFC 336
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIP--- 263
+ G+ +DA+ M + G + + L+D K + VE A ++ K C+P
Sbjct: 337 KCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVV 396
Query: 264 -------------------------LSSQ------IFNILIHGWCKTRKVDDAQKAMKEM 292
LS+ FN +I CKT +VD A + +
Sbjct: 397 SYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLI 456
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GCKPSVITYTIVMHALGKAKQ 351
+ G +P++V+Y + C+ + F + + L+EM K GC P +ITY V+ L K+K+
Sbjct: 457 QESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKR 516
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++ A K++ +M SD PD YS +I L K + +AN + E M K G P +TY T
Sbjct: 517 VDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGT 576
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I C + AL++LQ + PD T++ + ++ R++ LL M +
Sbjct: 577 LIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAG 636
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+ D TY +L++G ++ + E A FE M G P ++TY L L K+
Sbjct: 637 LVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKK 690
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 92/310 (29%), Positives = 154/310 (49%), Gaps = 5/310 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q G + YNT++ L K+ K L+++M NN + T +TI+ + + R
Sbjct: 388 QKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLS-NNCVPDIVTFNTIIDAMCKTYRV 446
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQIFN 270
D A E F +++ G + + L+ L K + A + E + C P +N
Sbjct: 447 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSP-DIITYN 505
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+I G CK+++VD A K +M G +PD V+Y+ I C+ + + ++ L+ M +
Sbjct: 506 TVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKN 565
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P ITY ++ K +++AL++ + + S PD +S I LSK GR++ A
Sbjct: 566 GFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQA 625
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+ E M + G+VP+ +TYNT++ C S E+A+ L + M + C+PD TY L+
Sbjct: 626 GELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGH 685
Query: 451 CCRKKRMKVL 460
KK K L
Sbjct: 686 LVDKKSYKDL 695
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 106/353 (30%), Positives = 177/353 (50%), Gaps = 37/353 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N MVD ++ L+ M ++ G L T +++++ L+R GR+D A E FR
Sbjct: 197 HNVMVDARFRAGDVEAAMALIDSM--VSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRA 254
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
M GV D R+ FN+LI G+C+ ++
Sbjct: 255 MDACGVAPDVRS----------------------------------FNMLIGGFCRAGEL 280
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
++A + KEM + +PDVVS++C I + R + + L+EM+E G P + YT+V
Sbjct: 281 EEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMV 340
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ +A + EAL+V ++M + CLPD Y++L+ L K R+ DA E+ +MK++GV
Sbjct: 341 IGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGV 400
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P++ T+ T+I C E AL+ + + +PD TY L+ CR+ + N
Sbjct: 401 PPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANE 460
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
L M ++ + TY+ L+ E G+++ A +F +EM++KGIVP TY
Sbjct: 461 LWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYN 513
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 160/320 (50%), Gaps = 3/320 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ + S ++ R G D A E R M+++G+ D ++++ + + A +V
Sbjct: 299 VVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRD 358
Query: 257 EFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E C+P +N L++G CK R++ DA++ + EM ++G PD+ ++T I YCR+
Sbjct: 359 EMVAFGCLP-DVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRD 417
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ K + ++ +P ++TY ++ + + + +A ++++ M S + P+ Y
Sbjct: 418 GNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTY 477
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S LI + G+V +A ++M +G+VPN++TYN++I C + L KM
Sbjct: 478 SILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRH 537
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
D PD TY L+ ++ +M LL M +V DA TY ++ G G ++
Sbjct: 538 DKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQE 597
Query: 495 ACSFFEEMISKGIVPYHSTY 514
A +++M ++GI P TY
Sbjct: 598 ADWVYKKMGARGIEPDRYTY 617
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 187/405 (46%), Gaps = 15/405 (3%)
Query: 113 KVVEALKGCGVSVS----NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEM--YNT 166
+V A+ CGV+ N L+ R + +L A F+ K G TP++ ++
Sbjct: 250 EVFRAMDACGVAPDVRSFNMLIGGFCR--AGELEEALRFY---KEMRGRRVTPDVVSFSC 304
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST-IMRRLVRGGRYDDAVEAFRGMKK 225
++ + + + E ++EM E G + + T ++ R G +A+ M
Sbjct: 305 LIGLFTRRGEMDHAAEYLREMREF--GLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVA 362
Query: 226 YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDD 284
+G D + L++ L K + A ++ E K+ +P F LIHG+C+ ++
Sbjct: 363 FGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEK 422
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A + + Q PD+V+Y I+ CR+ D K ++ +M + P+ +TY+I++
Sbjct: 423 ALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILID 482
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
+ + Q++ A ++M + +P+ Y+S+I ++G V + M+ V+P
Sbjct: 483 SHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMP 542
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+++TYNT+I + A LL+ ME + +PD TY ++ M+ +++
Sbjct: 543 DLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVY 602
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
M + D TY S++ G + +G + + +EM+ KG+ P
Sbjct: 603 KKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAP 647
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 140/279 (50%), Gaps = 4/279 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ L K ++ EL+ EM E L T +T++ R G + A++ F +
Sbjct: 372 YNTLLNGLCKERRLSDAEELLNEMKE-RGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTI 430
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ D + L+D + + + A +++ + ++ P + ++ILI C+ +
Sbjct: 431 SDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFP-NHVTYSILIDSHCEKGQ 489
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD+A + EM +G P++++Y I+ YCR + K L +M+ P +ITY
Sbjct: 490 VDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNT 549
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H K +++EA + + M++++ PD Y+ +I S G +++A+ +++ M +G
Sbjct: 550 LIHGYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARG 609
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ P+ TY +MI+ + + +L +M + PD
Sbjct: 610 IEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQKGLAPD 648
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 120/240 (50%), Gaps = 3/240 (1%)
Query: 300 DVVSYT--CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+V +YT + YC+ F +VD + EM+++ P V+T+ +++ A +A + A+
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ + M S P Y+S++ L + GR A E+F M GV P+V ++N +I C
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E E AL+ ++M PD +++ L+ + R+ M L M + + D
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
Y ++ G +G + A +EM++ G +P TY L L +++RL +A+E +N++
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM 395
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/211 (20%), Positives = 89/211 (42%), Gaps = 2/211 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++D + + EL +M + + T S ++ G+ D+A M
Sbjct: 442 YNTLIDGMCRQGDLGKANELWDDMHS-REIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKV 282
G+ + + ++ + +V + + + D + +N LIHG+ K K+
Sbjct: 501 VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKM 560
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A +K M + PD V+Y I + + ++ D K+M +G +P TY +
Sbjct: 561 HEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSM 620
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
++ A ++ +++++M PD F
Sbjct: 621 INGHVVAGNSKKSFQLHDEMLQKGLAPDDKF 651
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 191/381 (50%), Gaps = 7/381 (1%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP++ Y +++D LGK K+ ++L KEM L + + ++R L++ G+ A
Sbjct: 53 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEM-ALRGLALDTVCYTALIRELLQTGKIPQAS 111
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHG 275
++ M +G D LS ++D L K + A ++F +E + P + +++ LIHG
Sbjct: 112 SVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP-NEVVYSALIHG 170
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
CK RK+D A + + +M + +PD ++Y I+ C+ D EM E GCKP
Sbjct: 171 LCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPD 230
Query: 336 VITYTIVMHALGKAKQINEAL-KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
V TY I++ KA + A + ++ + C D Y++++ L+K ++++A +
Sbjct: 231 VYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALM 290
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
E + G P + TYN +++ C E A+ LL+K+ ++ C PD TY L+ ++
Sbjct: 291 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 350
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
KR L M +++D Y +L+R L+++GK+ A S ++ M S G VP T
Sbjct: 351 KRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTL 410
Query: 515 KMLEEKLEKKRLGNAKERINK 535
+ + L K A RI K
Sbjct: 411 STMIDGLSKAGRIGAAVRIFK 431
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 103/371 (27%), Positives = 174/371 (46%), Gaps = 7/371 (1%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP+ YN ++D L KS EM E + T + ++ + G D A
Sbjct: 193 TPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGC-KPDVYTYNILISGFCKAGNTDAAS 251
Query: 218 EAF-RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIH 274
+ + G D + ++D L K +E A + + C P + +N L++
Sbjct: 252 HSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP-TIATYNALLN 310
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G CK ++++A ++++ G +PDVV+YT I+ +EK + KEM +G
Sbjct: 311 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLAL 370
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ YT ++ L + +I +A VY+ M S C+PD S++I LSKAGR+ A IF
Sbjct: 371 DTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIF 430
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ M+ +G+ PN + Y+ +I C + + AL++L +M++ C PD TY L+ C+
Sbjct: 431 KSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKS 490
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ M + D TY L+ G ++G + AC F++M S TY
Sbjct: 491 GDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTY 550
Query: 515 KMLEEKLEKKR 525
L L K+R
Sbjct: 551 GALISGLCKRR 561
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 171/348 (49%), Gaps = 4/348 (1%)
Query: 182 ELVKEMDELN-NGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
E V M+++ NG ++AT + ++ L + GR ++A++ R + G D + L+
Sbjct: 4 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 63
Query: 240 DTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
D L K AYK+F E + L + + LI +T K+ A K M G
Sbjct: 64 DGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 123
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PDVV+ + I+ + K M+ +G P+ + Y+ ++H L KA++++ AL++
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 183
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC- 417
+MK C PDT Y+ LI L K+G V+ A F++M + G P+V TYN +IS C
Sbjct: 184 LAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCK 243
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
A + + + L Q+ + C D TY ++ + K+++ L+ + N +
Sbjct: 244 AGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIA 303
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
TY +L+ GL + G+LE A +++ G P TY L + L K++
Sbjct: 304 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEK 351
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 151/312 (48%), Gaps = 39/312 (12%)
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
C P + +N L++G CK ++++A ++++ G +PDVV+YT I+ +EK +
Sbjct: 17 CTP-TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEA 75
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
KEM +G + YT ++ L + +I +A VY+ M S C+PD S++I
Sbjct: 76 YKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDG 135
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
LSKAGR+ A IF+ M+ +G+ PN + Y+ +I C + + AL++L +M++ C PD
Sbjct: 136 LSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 195
Query: 441 CETYAPLLKMCCR-------------------KKRMKVLNFLLTHMFK------------ 469
TY L+ C+ K + N L++ K
Sbjct: 196 TITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLA 255
Query: 470 -----NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
N ++D TY ++V L ++ K+E A + E++ + G P +TY L L K
Sbjct: 256 QETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCK- 314
Query: 525 RLGNAKERINKL 536
+G +E I+ L
Sbjct: 315 -MGRLEEAIDLL 325
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 179/465 (38%), Gaps = 112/465 (24%)
Query: 152 KTQTGYMHTPEMY--NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
KT T + P++ +TM+D L K+ + + K M E + S ++ L +
Sbjct: 115 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSM-EARGLAPNEVVYSALIHGLCK 173
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQ 267
+ D A+E MKK DT +VL+D L K VE A F E C P
Sbjct: 174 ARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKP-DVY 232
Query: 268 IFNILIHGWC------------------------------------KTRKVDDAQKAMKE 291
+NILI G+C K +K+++A M++
Sbjct: 233 TYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEK 292
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
+ G +P + +Y + C+ + D L+++ + GC P V+TYT ++ LGK K+
Sbjct: 293 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 352
Query: 352 INEALK-----------------------------------VYEKMKSDDCLPDTSFYSS 376
EA K VY+ M S C+PD S+
Sbjct: 353 SFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLST 412
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPN------------------------------- 405
+I LSKAGR+ A IF+ M+ +G+ PN
Sbjct: 413 MIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 472
Query: 406 ----VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+TYN +I C + E A +M E CKPD TY L+ C+
Sbjct: 473 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 532
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
+ M + S + TY +L+ GL + +L A +F+ M +G
Sbjct: 533 GVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 126/237 (53%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+++A M+++ G +P + +Y + C+ + D L+++ + GC P V+TYT
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ LGK K+ EA K++++M DT Y++LI L + G++ A+ +++ M
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G VP+V+T +TMI A+++ + ME P+ Y+ L+ C+ ++M
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+L M K + D TY L+ GL +SG +E A +FF+EM+ G P TY +L
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNIL 237
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%)
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
++++A + E + G P + TYN +++ C E A+ LL+K+ ++ C PD TY
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ ++KR L M +++D Y +L+R L+++GK+ A S ++ M S
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
G VP T + + L K A RI K
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFK 150
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 85/175 (48%)
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
+I EA+ + EK+ ++ C P + Y++L+ L K GR+++A ++ + G P+V+TY
Sbjct: 1 KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
++I A KL ++M D Y L++ + ++ + + M +
Sbjct: 61 SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
D T ++++ GL ++G++ A F+ M ++G+ P Y L L K R
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKAR 175
>gi|297745567|emb|CBI40732.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 200/433 (46%), Gaps = 5/433 (1%)
Query: 98 DKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGY 157
+K+ + ++ + + AL G+ ++ +V + + R + FF WA Q
Sbjct: 62 EKLRGVFIQRLRGKAAIELALTNVGIDLTIDIVSEVINRGNLGGEAMVIFFNWAVKQPTI 121
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
+ YN ++ LG+ K + +++K+M + + T+S +M ++ + A+
Sbjct: 122 PKDVDTYNVIIKALGRRKFIEFVVKVLKDM-HIQGISPNYETLSIVMDSFIKARQVSKAI 180
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
E FR ++++G + DT +L+VL+ L + + V A F K IP + +NI+I GW
Sbjct: 181 EMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAMKGGIPFNCMTYNIIIGGWS 240
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K K+ + ++ +K M GFSP+ ++++ IE R + M+E GC P+
Sbjct: 241 KYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNAC 300
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y ++ + +E LK Y M S +C P+ Y+ LI KA +V DA E+ ++M
Sbjct: 301 VYNALISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEM 360
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+G++P + I C A+ + +K + C+ Y LL R +
Sbjct: 361 VGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKC 420
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+L L M ++ S D Y ++ GL G+L+ A EE + KG P +++
Sbjct: 421 GMLLNLWDEMQESGYSSDTEVYEYVINGLCNIGQLDTAVLVMEESLHKGFCP----SRLI 476
Query: 518 EEKLEKKRLGNAK 530
KL K L + K
Sbjct: 477 RSKLNNKLLASNK 489
>gi|147865347|emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
Length = 561
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 110/433 (25%), Positives = 197/433 (45%), Gaps = 5/433 (1%)
Query: 98 DKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGY 157
+K+ + ++ + + AL G+ ++ +V + R + FF WA Q
Sbjct: 103 EKLRGVFIQRLRGKAAIELALTNVGIDLTIDIVSEVXNRGNLGGEAMVXFFNWAVKQPTI 162
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
+ YN ++ LG+ K ++K+M + + T+S +M ++ + A+
Sbjct: 163 PKDVDTYNVIIKALGRRKFIEFXVXVLKDM-HIQGISPNYETLSIVMDSFIKARQVSKAI 221
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
E FR ++++G + DT +L+VL+ L + + V A F K IP + +NI+I GW
Sbjct: 222 EMFRNLEEFGGKCDTESLNVLLQCLCQRSHVGAANLFFNAMKGGIPFNCMTYNIIIGGWS 281
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K K+ + ++ +K M GFSP+ ++++ IE R + M+E GC P+
Sbjct: 282 KYGKIGEMERCLKAMVADGFSPNCLTFSHLIEGLGRAGRIDDAVEVFHHMEETGCVPNAC 341
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y ++ + +E LK Y M S +C P+ Y+ LI KA +V DA E+ ++M
Sbjct: 342 VYNALISNFISTRDFDECLKYYNFMVSSNCDPNMDTYTKLIVAFLKARKVADALEMLDEM 401
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+G++P + I C A+ + +K + C+ Y LL R +
Sbjct: 402 VGRGMIPTTGAITSFIEPLCQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFGKC 461
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+L L M ++ S D Y ++ GL G+L+ A EE + KG P +++
Sbjct: 462 GMLLNLWDEMQESGYSSDTEVYEYVINGLCNIGQLDTAVLVMEESLXKGFCP----SRLI 517
Query: 518 EEKLEKKRLGNAK 530
KL K L + K
Sbjct: 518 RSKLNNKLLASNK 530
>gi|147782978|emb|CAN70810.1| hypothetical protein VITISV_034914 [Vitis vinifera]
Length = 708
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 122/426 (28%), Positives = 207/426 (48%), Gaps = 12/426 (2%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
+D DK+ K ++ + +AL GV ++ LV + L + + AF FF WA Q
Sbjct: 207 SDADKLYKAIANNANPESDMEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQ 266
Query: 155 TGYMHTPEMYNTMVDVLG----KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
Y H P YN M+D+L K K+F ++ +++ M + V + + I+R+
Sbjct: 267 DCYSHEPRAYNEMIDILSSTKYKVKQFRIVCDMLDYMKRNDKKSVPVEVLLMILRKYTE- 325
Query: 211 GRYDDAVEAFRGMKKYGV--EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
++ + F KK V + + AL++L+D L K + VE A +F K+ + +
Sbjct: 326 -KHLAHLHKFAKKKKIRVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANT 384
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+NIL GWC+ R + ++EM + G +PD +Y I+ +C+ + + + M+
Sbjct: 385 YNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMR 444
Query: 329 EKGC---KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
KG P+ TY I++ AL ++ + E K+ + M + LPD S Y +I + AG
Sbjct: 445 TKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAG 504
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+V++A + E+M +G P+++TYN + C + E AL L +M E C P T+
Sbjct: 505 KVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFN 564
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ M M K + D TY ++ GL K+E AC +E+I+K
Sbjct: 565 MLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVINK 624
Query: 506 GI-VPY 510
GI +PY
Sbjct: 625 GIKLPY 630
>gi|242074540|ref|XP_002447206.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
gi|241938389|gb|EES11534.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
Length = 446
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 109/390 (27%), Positives = 193/390 (49%), Gaps = 8/390 (2%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTM---VDVLGKSKKFCLM 180
S+ S V +TL ++ND A FF W+ + TG + P T+ VD+LGK +F L
Sbjct: 36 SLDASAVLETLSLYANDWRRALDFFHWSASPTG-ANLPPTAATLARAVDILGKHFEFPLA 94
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
L+ + + + ++ RL DDA+ AF +D + +L+D
Sbjct: 95 TSLLLSHHDPEDPAFLRPALRALLNRLAAANLVDDALRAFDSTAASIGLRDEASFHLLVD 154
Query: 241 TLVKGNSVEHA-YKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L V+ A + F + P ++ N+L+ GW KTR ++ +M ++G +
Sbjct: 155 ALCDHRRVDEADHLCFGKDPPPFPPGTKTHNLLLRGWAKTRAWARLRQLWFDMDRRGVAK 214
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D+ SY+ +++ + K KEM++KG + + Y +HA+G A+ ++ A+++Y
Sbjct: 215 DLHSYSIYMDALAKSGKPWKTFKVFKEMKQKGVRIDTVAYNTAIHAVGLAQGVDSAVRLY 274
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+M C P+T+ Y+ ++ + K GR K+ + M K G P+VLTY+
Sbjct: 275 RQMVDAGCKPNTATYNGIVKLFCKEGRFKEGYAFVQQMHKTGCKPDVLTYHCFFQFL--- 331
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
S + L L +KM E C+P +TY L+K R ++ + + M + +S DA Y
Sbjct: 332 SRPQEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAY 391
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVP 509
+L+ L++ G ++LA + EEM++KG+ P
Sbjct: 392 NALIDALLQKGMVDLARKYDEEMLAKGLSP 421
>gi|240256396|ref|NP_199195.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635652|sp|P0C8R0.1|PP416_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g43820
gi|332007631|gb|AED95014.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 546
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 126/468 (26%), Positives = 214/468 (45%), Gaps = 10/468 (2%)
Query: 61 DEDFVIPSLAGW--VESHRLN---EKSRISSRVLSENHETDVDKISKILSKQYQSPDKVV 115
DE +V+ L+ + S++ + E S ++V ++ + DK+ + ++ + +
Sbjct: 46 DESYVLAELSSLLPISSNKTSVSKEDSSSKNQVAIDSFLSAEDKLRGVFLQKLKGKSAIQ 105
Query: 116 EALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSK 175
++L G+ +S +V L R + FF WA + G Y+ ++ LG+ K
Sbjct: 106 KSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRK 165
Query: 176 KFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR 233
F M +++K M + +N L ++ M VR A+E F + +GV+ T
Sbjct: 166 LFSFMMDVLKGMVCEGVNP---DLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTE 222
Query: 234 ALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
+ + L+ L + + V A VF K IP S +NI+I GW K +V++ +K +KEM
Sbjct: 223 SFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
+ GF PD +SY+ IE R + ++ KG P Y ++ A+ +
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
E+++ Y +M ++C P+ YS L+ L K +V DA EIFE+M +GV+P + +
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C+ A+ + QK + C+ Y LLK R + +L + M ++
Sbjct: 403 KPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYP 462
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
D Y +V GL G LE A EE + KG P Y L KL
Sbjct: 463 SDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRLSSKL 510
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 109/283 (38%), Gaps = 39/283 (13%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN M+ K + M +++KEM E G L + S ++ L R GR +D+VE F +
Sbjct: 258 YNIMISGWSKLGEVEEMEKVLKEMVESGFGPDCL-SYSHLIEGLGRTGRINDSVEIFDNI 316
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
K G D + ++ + + + + + D C P + + ++ L+ G K RK
Sbjct: 317 KHKGNVPDANVYNAMICNFISARDFDESMRYYRRMLDEECEP-NLETYSKLVSGLIKGRK 375
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC----------------------------- 312
V DA + +EM +G P T F++ C
Sbjct: 376 VSDALEIFEEMLSRGVLPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKL 435
Query: 313 ---REKDFRKVD---DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
R F K + EMQE G V Y ++ L + A+ V E+
Sbjct: 436 LLKRLSRFGKCGMLLNVWDEMQESGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKG 495
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
P+ YS L L + + + A ++F +KK N ++
Sbjct: 496 FCPNRFVYSRLSSKLMASNKTELAYKLFLKIKKARATENARSF 538
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 216/493 (43%), Gaps = 80/493 (16%)
Query: 122 GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT-GYMHTPEMYNTMVDVLGKSKK---- 176
G S + +V + + D A FF WA G+ HT +N+++ VL + KK
Sbjct: 38 GASTTPRIVGRVVNSL-KDAKLALAFFRWAPASIPGFSHTAFSWNSLLQVLVRCKKHREA 96
Query: 177 -------------------------FC------LMWELVKEMDELNNGYVSLA-TMSTIM 204
FC EL++EM + G+ A T + I+
Sbjct: 97 GDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEMK--SAGFAPDAFTHTPII 154
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CI 262
+ G D A++ R M G + + + L+ + +E A K+ E ++ C
Sbjct: 155 TAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCP 211
Query: 263 P----------------------------------LSSQIFNILIHGWCKTRKVDDAQKA 288
P + FN L+ G+CK VDDA+K
Sbjct: 212 PNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKL 271
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+ M +G P+VV+Y+ I+ C+ + F + + L+EM+ +G P TY+ ++H L K
Sbjct: 272 LGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCK 331
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
A +I EA ++ +M C PD YSS+I K+G++ +A + ++M+KQ P+V+T
Sbjct: 332 ADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVT 391
Query: 409 YNTMISSACARSEEENALKLLQKMEEDL-CKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
YNT+I C + A +L++M+E PD TY+ ++ C+ + LL M
Sbjct: 392 YNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 451
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLG 527
K + D TY +++ GL + G+LE A + M G P TY L L K R
Sbjct: 452 CKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKV 511
Query: 528 NAKERINKLLAHA 540
+ ER+ + + +A
Sbjct: 512 DEAERVMEEMRNA 524
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/314 (31%), Positives = 169/314 (53%), Gaps = 6/314 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T S ++ L + ++ +A E MK GV D S L+ L K + +E A ++
Sbjct: 283 NVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQML 342
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ C P +++ +IH +CK+ K+ +AQK ++EM +Q SPDVV+Y I+ C+
Sbjct: 343 RRMAGSGCTP-DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 401
Query: 314 EKDFRKVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ L++MQE G P V+TY+ V++ L K+ + EA K+ ++M C PD
Sbjct: 402 LGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVV 461
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+++I L K GR+++A + + MK+ G PNV+TY T+IS C + + A +++++M
Sbjct: 462 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 521
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM--FKNDVSMDAGTYASLVRGLIESG 490
C P+ TY ++ C R+K L+ M + + S DA TY ++V L+ S
Sbjct: 522 RNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSD 581
Query: 491 KLELACSFFEEMIS 504
++ A E+M S
Sbjct: 582 LVQEAEQLLEQMKS 595
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 173/342 (50%), Gaps = 5/342 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN +VD L K ++VK+M E G+ ++ T ++++ + G DDA +
Sbjct: 217 YNVLVDALCKLSMVGAAQDVVKKMIE--GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGI 274
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
M G+ + S L+D L K A +V E K + + ++ LIHG CK K
Sbjct: 275 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADK 334
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+++A++ ++ M G +PDVV Y+ I +C+ + TL+EM+++ P V+TY
Sbjct: 335 IEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNT 394
Query: 342 VMHALGKAKQINEALKVYEKMK-SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
V+ L K +I EA + E+M+ S D LPD YS++I L K+ + +A ++ + M K
Sbjct: 395 VIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKA 454
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+V+TY T+I C E A LLQ M+ C P+ TY L+ C+ +++
Sbjct: 455 GCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEA 514
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
++ M + TY ++V GL SG+++ A + M
Sbjct: 515 ERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 556
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 100/342 (29%), Positives = 162/342 (47%), Gaps = 20/342 (5%)
Query: 113 KVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLG 172
K++E V NSLV+ +R + D AK G Y+ ++D L
Sbjct: 239 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAK---GMRPNVVTYSALIDGLC 295
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
KS+KF E+++EM G A T S ++ L + + ++A + R M G D
Sbjct: 296 KSQKFLEAKEVLEEMK--TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 353
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSSQIFNILIHGWCKTRKVDDA 285
S ++ K + A K E + D + +N +I G CK K+ +A
Sbjct: 354 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVV-----TYNTVIDGLCKLGKIAEA 408
Query: 286 QKAMKEMFQQG-FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
Q +++M + G PDVV+Y+ I C+ + L M + GC P V+TYT ++
Sbjct: 409 QVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIID 468
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
L K ++ EA + + MK C P+ Y++LI L KA +V +A + E+M+ G P
Sbjct: 469 GLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPP 528
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDL--CKPDCETY 444
N++TYNTM++ C + A +L+Q+M++ C PD TY
Sbjct: 529 NLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATY 570
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 5/205 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++D L K K ++++M E + + T ST++ L + +A + M
Sbjct: 392 YNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 451
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRK 281
K G D + ++D L K +E A + K C P + + LI G CK RK
Sbjct: 452 CKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAP-NVVTYTTLISGLCKARK 510
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE--KGCKPSVITY 339
VD+A++ M+EM G P++V+Y + C ++ ++ M++ C P TY
Sbjct: 511 VDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATY 570
Query: 340 TIVMHALGKAKQINEALKVYEKMKS 364
+++AL + + EA ++ E+MKS
Sbjct: 571 RTIVNALMSSDLVQEAEQLLEQMKS 595
>gi|225427504|ref|XP_002263624.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Vitis vinifera]
Length = 709
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 121/426 (28%), Positives = 207/426 (48%), Gaps = 12/426 (2%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
+D DK+ K ++ + +AL GV ++ LV + L + + AF FF WA Q
Sbjct: 234 SDADKLYKAIANNANPESDMEKALDLVGVELTTDLVIEILGKIHFEEKMAFRFFMWAGHQ 293
Query: 155 TGYMHTPEMYNTMVDVLG----KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
Y H P YN M+D+L K K+F ++ +++ M + V + + I+R+
Sbjct: 294 DCYSHEPRAYNEMIDILSSTKYKVKQFRIVCDMLDYMKRNDKKSVPVEVLLMILRKYTE- 352
Query: 211 GRYDDAVEAFRGMKKYGV--EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
++ + F KK V + + AL++L+D L K + VE A +F K+ + +
Sbjct: 353 -KHLAHLHKFAKKKKIRVKTQPEINALNLLLDALCKCSLVEDAQAMFRRVKNKVKPDANT 411
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+NIL GWC+ R + ++EM + G +PD +Y I+ +C+ + + + M+
Sbjct: 412 YNILFFGWCRVRNPSRGMRVLEEMIEMGHTPDSFTYNTAIDSFCKAGMVTEATELFEFMR 471
Query: 329 EKGC---KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
KG P+ TY I++ AL ++ + E K+ + M + LPD S Y +I + AG
Sbjct: 472 TKGSTMSSPTAKTYAIMILALVQSDRTEECFKLIKDMINSGVLPDVSTYKQVIEGMCLAG 531
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+V++A + E+M +G P+++TYN + C + E AL L +M E C P T+
Sbjct: 532 KVEEAYKFLEEMGNKGYRPDIVTYNCFLDVLCENKKSEEALGLYGRMIEAGCVPSVHTFN 591
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ M M K + D TY ++ GL K+E AC +E+++K
Sbjct: 592 MLISMFFEIGEPDGAFETWHEMDKRGCARDTDTYCVMIEGLFNCNKMEDACFLLDEVVNK 651
Query: 506 GI-VPY 510
GI +PY
Sbjct: 652 GIKLPY 657
>gi|90399282|emb|CAH68243.1| H0306F03.10 [Oryza sativa Indica Group]
gi|125549952|gb|EAY95774.1| hypothetical protein OsI_17648 [Oryza sativa Indica Group]
Length = 442
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 111/385 (28%), Positives = 189/385 (49%), Gaps = 8/385 (2%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTG--YMHTPEMYNTMVDVLGKSKKFCLMWELVKEM 187
V +TL ++ND A FF W+ + G TP VDVLGK +F L L+
Sbjct: 36 VLETLSLYANDWRRALEFFHWSASPDGANVPPTPATVARAVDVLGKHFEFPLATSLLVSH 95
Query: 188 DELNNGYVSL--ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
+ S + +++ RL DDA+ AF +D + L+D L
Sbjct: 96 HDPGRADPSFLRPALRSLLNRLAAANLIDDAIRAFDSTAGSIGLRDEASFHALVDALCDH 155
Query: 246 NSVEHAYKV-FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
V+ A+ + F + P ++ +N+L+ GW KTR ++ +M +G + D+ SY
Sbjct: 156 RRVDEAHHLCFGKDPPPFPPVTKTYNLLLRGWAKTRAWARLRQLWFDMDSRGVAKDLHSY 215
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ +++ + K KEM++KG V+ Y +H++G A+ ++ A+++Y +M
Sbjct: 216 SIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLAQGVDFAIRLYRQMVD 275
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
C P+ S +++++ +L K GR K+ + M K G+ PNVLTY+ S +
Sbjct: 276 AGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTYHCFFQYL---SRPQE 332
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
L L +KM E C P +TY L+K R ++ + + M + +S DA Y SL+
Sbjct: 333 VLGLFEKMLERGCWPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNSLID 392
Query: 485 GLIESGKLELACSFFEEMISKGIVP 509
L++ G ++LA + EEM+SKG+ P
Sbjct: 393 ALLQKGMVDLARKYDEEMLSKGLSP 417
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 167/322 (51%), Gaps = 3/322 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE- 257
T + ++ L + G++D+A R M G DT S L+D L K S E A++V +
Sbjct: 80 TYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 139
Query: 258 FKDCIPLSSQIFNILIHGWC-KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ + S F +I C K V+ A K + + +GF+P V+ + I +C+ KD
Sbjct: 140 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 199
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
L+ M EKGC P+V T+TI++ L KA ++ EA ++ EKM + C P+ YS+
Sbjct: 200 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYST 259
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L K G+V DA E+F+ M+++ PNV+T+N +I C E A +L +M E
Sbjct: 260 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 319
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS-MDAGTYASLVRGLIESGKLELA 495
C PD TY L+ C+ ++ L + ++ VS +A TY++L G G++ A
Sbjct: 320 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 379
Query: 496 CSFFEEMISKGIVPYHSTYKML 517
C F ++ KG P +TY L
Sbjct: 380 CRIFSMLVDKGFSPDLATYTSL 401
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 151/331 (45%), Gaps = 11/331 (3%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++R G D A++ MK G E + + LM L V A + F
Sbjct: 11 TYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM 70
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR---- 313
KDC P + L+H CK K D+AQ ++EM +G +PD V+++ I+ C+
Sbjct: 71 AKDCAP-DVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSE 129
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITY-TIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
E+ FR ++D + ++G S + TI+ K + A KV + + P
Sbjct: 130 EQAFRVLEDVI----QRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
++ +I KA + A ++ E M ++G VPNV T+ +I+ C + A +LL+KM
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
C P+ TY+ ++ C++ ++ L M + + + T+ L+ GL ++ ++
Sbjct: 246 VTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRI 305
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
E A + M G P TY L + L K
Sbjct: 306 EEARQLYHRMRETGCAPDIITYNSLIDGLCK 336
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 174/399 (43%), Gaps = 49/399 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+T+++ L K + +EL + M E N ++ T + ++ L + R ++A + + M
Sbjct: 257 YSTVINGLCKQGQVDDAYELFQLM-ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 315
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS------SQIFNILIHGWC 277
++ G D + L+D L K V+ A+++F IP S + ++ L HG+
Sbjct: 316 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLF----QTIPESGVSAANAVTYSTLFHGYA 371
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR---------------EKDFRKVDD 322
++ DA + + +GFSPD+ +YT I YC+ K F +
Sbjct: 372 ALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVN 431
Query: 323 TLK--------------------EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
TL M +GC + Y +V+ + +A + N+AL V E++
Sbjct: 432 TLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQV 491
Query: 363 --KSDDCL-PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
K D P +S +L+ L + GR DA ++ M ++G V +YN ++S
Sbjct: 492 IDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRL 551
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ A ++ + M P+ T ++ C ++ L+ M K D T
Sbjct: 552 QRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETC 611
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
+L+ G +SG+ +LA EEM G+ P +T+ +LE
Sbjct: 612 NTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLLE 650
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 119/245 (48%), Gaps = 11/245 (4%)
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P+ +Y I + D L+EM+ G + + + +T +M L A ++ EAL+
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+ M + DC PD Y++L+ L KAG+ +A + +M +G P+ +T++T+I C
Sbjct: 67 FRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 419 RSEEENALKLLQK-MEEDLCKPDCETYAPLLKMCCRKKRM----KVLNFLLTHMFKNDVS 473
EE A ++L+ ++ + D + ++C + + KVL ++ F V
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKER 532
M + ++ G ++ L+ A E MI KG VP T+ +L L K R+G A++
Sbjct: 186 M----FNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQL 241
Query: 533 INKLL 537
+ K++
Sbjct: 242 LEKMV 246
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 151/336 (44%), Gaps = 19/336 (5%)
Query: 120 GCG--VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVD---VLGKS 174
GC + NSL++ + F D AF F Y+T+ LG+
Sbjct: 319 GCAPDIITYNSLIDGLCKSFQVD--EAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRM 376
Query: 175 KKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR 233
C ++ ++ ++ G+ LAT ++++ + R + VE M G
Sbjct: 377 ADACRIFSML-----VDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVN 431
Query: 234 ALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKE 291
LS ++ L +GN E A ++F + + C + I+N+++ G + K + A +++
Sbjct: 432 TLSAVLGGLFEGNHTERAIQLFDSMAARGCTD-DALIYNLVVEGMARASKHNKALAVLEQ 490
Query: 292 MFQ---QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+ + F+P + +E C+ L +M E+G +V +Y ++ L +
Sbjct: 491 VIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSR 550
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
++ +EA +V+E M S P+ S + +I L A +V DA E+ + M K G P++ T
Sbjct: 551 LQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIET 610
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
NT+I C + A KLL++M E +P+ T+
Sbjct: 611 CNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTH 646
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 117/396 (29%), Positives = 196/396 (49%), Gaps = 37/396 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDE---------------------------------L 190
Y T+VD LGK+ + L++EM++ +
Sbjct: 566 YTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMV 625
Query: 191 NNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE 249
G V+ ++T S ++ L + D A++ F MK+ G+E L+ +LVK ++
Sbjct: 626 RKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKID 685
Query: 250 HAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
A ++F E ++ +P + ++NI+++G K+ +VD+A K + M Q PD+ +YT
Sbjct: 686 FALQIFNELQESSLVP-DTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSL 744
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
++ + + + +M E+G +P V+ YT +M LGK +++ AL ++ M C
Sbjct: 745 LDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRC 804
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
+PD YSSLI L K GRV++A FE+ +G PNV Y+++I S + + AL+
Sbjct: 805 VPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALE 864
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L ++M+ C P+ TY LL + R+ V LL M K D TY L+ G+
Sbjct: 865 LFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVG 924
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ G ++ A S+F+ M KGIVP T+ L E L K
Sbjct: 925 KMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGK 960
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 113/417 (27%), Positives = 195/417 (46%), Gaps = 35/417 (8%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLA 198
DL A FFTWA Q GY HT Y M+ L +++ + +++ M G+ +S+
Sbjct: 161 DLHLAKCFFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAM--WKEGHRISMH 218
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
+++++R A+E F MK +G T + +++ LVKG A VF +
Sbjct: 219 LLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKL 278
Query: 259 KDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
I +Q F I +H + ++ ++D A + ++EM + G P V ++T I+ + +
Sbjct: 279 GQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNI 338
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ M+ C P+V+TYT +++ L KA ++ EA +V+ +MK ++C PD Y++L
Sbjct: 339 DEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTL 398
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L KAG A +F++MK +G+VPN+ TYN MIS + A +L ++E
Sbjct: 399 IDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGA 458
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND----VSMDAG---------------- 477
PD TY L+ + + +M + ++ M + +S D+
Sbjct: 459 VPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEY 518
Query: 478 -----------TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
TY +L+ I +G ++ A E M +P TY L + L K
Sbjct: 519 PSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGK 575
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/395 (26%), Positives = 185/395 (46%), Gaps = 33/395 (8%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNN----------------------------GYV 195
YNT++DVLGK + + ++KEM E G+
Sbjct: 465 YNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFK 524
Query: 196 SLA--TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
SL T +T+M + G D+AV+ MKK+ + L+D L K ++ A
Sbjct: 525 SLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVS 584
Query: 254 VF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
+ +E + C P S ++ L+ + K + +++ EM ++G DV +Y+ I
Sbjct: 585 LLREMEKQGCEP-SVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCL 643
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C+ D + D M+E+G +P + Y ++ +L K ++I+ AL+++ +++ +PDT
Sbjct: 644 CKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDT 703
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y+ ++ L K+ RV +A ++ + MK Q ++P++ TY +++ E A + K
Sbjct: 704 FVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTK 763
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M E+ +PD Y L+ + + ++ + M K D TY+SL+ L + G+
Sbjct: 764 MTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGR 823
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
+E A FFE ISKG P Y L + KK +
Sbjct: 824 VEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGM 858
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 117/466 (25%), Positives = 216/466 (46%), Gaps = 16/466 (3%)
Query: 72 WVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSV-SNSLV 130
W H L E+ + V + N DV + K ++VE C +S SN+
Sbjct: 447 WQLFHDLKEQGAVPD-VFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGH 505
Query: 131 EQTLRRFSNDLT-PAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE 189
E T+ + P+ GF + + + + ++N VD K + E++K+ +
Sbjct: 506 EGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVK------LLEVMKKHEC 559
Query: 190 LNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE 249
+ ++ T +T++ L + GR D+AV R M+K G E S LM + K + E
Sbjct: 560 IP----TVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEE 615
Query: 250 HAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
+ +F E K C+ S ++++I+ CK+ VD A M ++G P + +Y
Sbjct: 616 ESLSLFDEMVRKGCVADVST-YSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTL 674
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
+ +++ E+QE P Y I+++ L K+ +++EA K+ + MK+ +
Sbjct: 675 LSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNI 734
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
LPD Y+SL+ L K+GR+++A +F M ++G P+V+ Y +++ + +AL
Sbjct: 735 LPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALI 794
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+ + M + C PD TY+ L+ ++ R++ + + + + G Y+SL+
Sbjct: 795 IFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFG 854
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ G ++ A FEEM + P TY L L K N E++
Sbjct: 855 KKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKL 900
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 108/393 (27%), Positives = 187/393 (47%), Gaps = 35/393 (8%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++D LGK+ + + L KEM + G V +L T + ++ L + GR +A + F
Sbjct: 395 YNTLIDGLGKAGEADMACGLFKEMKD--RGLVPNLRTYNIMISVLGKAGRQPEAWQLFHD 452
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF----KDCI---------------- 262
+K+ G D + L+D L KG ++ + E +CI
Sbjct: 453 LKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGA 512
Query: 263 ------------PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
L +N L+ + VD+A K ++ M + P VV+YT ++
Sbjct: 513 DRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDG 572
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
+ + L+EM+++GC+PSV+TY+ +M + K Q E+L ++++M C+ D
Sbjct: 573 LGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVAD 632
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
S YS +I L K+ V A ++F MK++G+ P + Y T++SS + + AL++
Sbjct: 633 VSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFN 692
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
+++E PD Y ++ + R+ L+ M ++ D TY SL+ GL +SG
Sbjct: 693 ELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSG 752
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+LE A + F +M +G P Y L + L K
Sbjct: 753 RLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGK 785
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 165/359 (45%), Gaps = 35/359 (9%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YN MV+ L KS + +LV M N L T ++++ L + GR ++A F
Sbjct: 705 VYNIMVNGLVKSNRVDEACKLVDSMKN-QNILPDLFTYTSLLDGLGKSGRLEEAFNMFTK 763
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
M + G E D A + LMD L KG + HA +F
Sbjct: 764 MTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIF--------------------------- 796
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ M ++ PDVV+Y+ I+ +E + + KGC P+V Y+ +
Sbjct: 797 -------RAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSL 849
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ + GK ++ AL+++E+M+ C P+ Y++L+ L+KAGR+ A ++ E+M+K G
Sbjct: 850 IDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGC 909
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
VP+++TYN +I + A ++M+E PD T+ L++ + ++
Sbjct: 910 VPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACE 969
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M + + TY L+ L +GK+ A F EM KG +P T +++ L
Sbjct: 970 LFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRIL 1028
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 152/294 (51%), Gaps = 9/294 (3%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
S L AF FT T+ G H P++ Y +++DVLGK K + + M +
Sbjct: 751 SGRLEEAFNMFT-KMTEEG--HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAK-KRCVP 806
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ T S+++ L + GR ++A F G + S L+D+ K V+ A ++F
Sbjct: 807 DVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELF 866
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E + C P + +N L+ G K +++ A+K ++EM + G PD+V+Y I+ +
Sbjct: 867 EEMQRRQCPP-NIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGK 925
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + K M+EKG P VIT+T ++ +LGK ++ EA ++++ M+ + P
Sbjct: 926 MGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVT 985
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
Y+ LI IL +AG+V +A IF +MK +G +P+ +T M R ++ +AL+
Sbjct: 986 YNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVREQQFHALE 1039
>gi|255551140|ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544438|gb|EEF45959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 577
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 208/454 (45%), Gaps = 20/454 (4%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
+D + +LS P + AL G+ SL+ F++ F WA Q
Sbjct: 59 SDFSTLCNLLSDPNLKP--LETALDQTGIKPETSLLNAVFDHFNSSPKLLHSLFVWADKQ 116
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
+ + ++N++++ LGK K+F W LV + G VS T + ++RR R G
Sbjct: 117 PEFESSTTLFNSVINALGKMKEFDSAWCLVLD----RTGLVSSDTFAILIRRYTRAGMPQ 172
Query: 215 DAVEAFRGMKKYGVEKD-------TRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPL 264
A+ F +Y + D L +L+D+L K V A + F + C
Sbjct: 173 SAIRTF----EYAISLDFICDYNCDALLEILLDSLCKEGHVRVAKEYFDSRKQLDSCWIP 228
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+I+NI+++GW ++RK+ A++ EM + SP VV+Y +E YCR + + + +
Sbjct: 229 HVRIYNIMLNGWFRSRKLKHAERLWLEMKKNNVSPSVVTYGTLVEGYCRMRRVERAIELV 288
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
M+++G +P+ + Y ++ AL + + E + E + P S Y+SL+ KA
Sbjct: 289 DVMRKEGIEPNALVYNPIIDALAEEGRFKEVSGMMEYFLQSESGPTISTYNSLVKGYCKA 348
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
A+++ + M +G VP TYN E + L KM E PD T+
Sbjct: 349 KDPVGASKVLKMMISRGFVPTPTTYNYFFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTF 408
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
LLKM C ++R+ + + M MD T L+ + E A FE+MI
Sbjct: 409 HLLLKMLCEEERLDLAVQISKEMRSRGCDMDLATSTMLIHLFCRMHRFEEAFMEFEDMIQ 468
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
KGIVP + T++ L ++L K+ + +++ +++
Sbjct: 469 KGIVPQYLTFQRLNDELRKRGMVERARKLSDMMS 502
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 128/312 (41%), Gaps = 41/312 (13%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YN M++ +S+K L EM + NN S+ T T++ R R + A+E
Sbjct: 232 IYNIMLNGWFRSRKLKHAERLWLEMKK-NNVSPSVVTYGTLVEGYCRMRRVERAIELVDV 290
Query: 223 MKKYGVEKDTRALSVLMDTLV---KGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKT 279
M+K G+E + + ++D L + V + FL+ + +S+ +N L+ G+CK
Sbjct: 291 MRKEGIEPNALVYNPIIDALAEEGRFKEVSGMMEYFLQSESGPTIST--YNSLVKGYCKA 348
Query: 280 RKVDDAQKAMK-----------------------------------EMFQQGFSPDVVSY 304
+ A K +K +M + G++PD +++
Sbjct: 349 KDPVGASKVLKMMISRGFVPTPTTYNYFFRHFSKFGMIEEGMNLYTKMIESGYTPDRLTF 408
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
++ C E+ KEM+ +GC + T T+++H + + EA +E M
Sbjct: 409 HLLLKMLCEEERLDLAVQISKEMRSRGCDMDLATSTMLIHLFCRMHRFEEAFMEFEDMIQ 468
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
+P + L L K G V+ A ++ + M N+ ++ A R+ +
Sbjct: 469 KGIVPQYLTFQRLNDELRKRGMVERARKLSDMMSSVPHSTNLPNTYSVEGDALRRARRSS 528
Query: 425 ALKLLQKMEEDL 436
L+ + M + L
Sbjct: 529 ILQKAEAMSKIL 540
>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
Length = 806
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/382 (30%), Positives = 191/382 (50%), Gaps = 14/382 (3%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
R +D A FF WA Q Y H P +Y +M++VL K+ K C V + + Y
Sbjct: 182 RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKT-KLCQGSRRVLVLMKRRGIYR 240
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ S +M R G+ DA++ M++ GVE + + +D V+ N +E A + F
Sbjct: 241 TPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALR-F 299
Query: 256 LEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
LE + + + +N +I G+C +V++A + +++M +G PD VSY + + C+
Sbjct: 300 LERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCK 359
Query: 314 EKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
EK +V D +K+M +E G P +TY ++H L K +EAL + + D
Sbjct: 360 EKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKL 419
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQK 431
YS+++ L K GR+ +A ++ +M +G P+V+TY +++ C E + A KLLQ
Sbjct: 420 GYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQV 479
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKR----MKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
M KP+ +Y LL CR + +++N H + S ++ TY+ ++ GL
Sbjct: 480 MHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW----SPNSITYSVIMHGLR 535
Query: 488 ESGKLELACSFFEEMISKGIVP 509
GKL AC EM+ KG P
Sbjct: 536 REGKLSEACDVVREMVLKGFFP 557
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 174/354 (49%), Gaps = 17/354 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFR 221
Y+ +V L K + +L+ EM L+ G+ + T + ++ R G D A + +
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEM--LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 478
Query: 222 GMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTR 280
M +G + +T + + L++ + + G S+E + + + +S +++++HG +
Sbjct: 479 VMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREG 538
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+ +A ++EM +GF P V ++ CR+ + ++E KGC +V+ +T
Sbjct: 539 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT 598
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
V+H + +++ AL V + M + D Y++L+ L K GR+ +A E+ + M +
Sbjct: 599 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHK 658
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET-YAPLLKMCCRKKRMKV 459
G+ P +TY T+I C + ++ + +L+KM + + C T Y +++ C +++
Sbjct: 659 GIDPTPVTYRTVIHRYCQMGKVDDLVAILEKM---ISRQKCRTIYNQVIEKLCVLGKLEE 715
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESG----KLELACSFFEEMISKGIVP 509
+ LL + + DA T +L+ G ++ G ++AC F ++ ++P
Sbjct: 716 ADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMF----NRNLIP 765
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 122/255 (47%), Gaps = 2/255 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ + F+ ++ + + ++ DA K + M + G P+++ I+ + R K L
Sbjct: 241 TPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFL 300
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+ MQ G P+V+TY ++ ++ EA+++ E M S CLPD Y +++ L K
Sbjct: 301 ERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKE 360
Query: 385 GRVKDANEIFEDM-KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
R+ + ++ + M K+ G+VP+ +TYNT+I + AL L+ +E + D
Sbjct: 361 KRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLG 420
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMF-KNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y+ ++ C++ RM L+ M K D TY ++V G G+++ A + M
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 480
Query: 503 ISKGIVPYHSTYKML 517
+ G P +Y L
Sbjct: 481 HTHGHKPNTVSYTAL 495
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 127/265 (47%), Gaps = 6/265 (2%)
Query: 280 RKVDDAQKAMKEMF----QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
R DD + A+K + Q + D + Y +E + K + L M+ +G +
Sbjct: 182 RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRT 241
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
++ VM + +A Q+ +ALKV M+ P+ ++ I + +A R++ A E
Sbjct: 242 PEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLE 301
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M+ G+VPNV+TYN MI C E A++LL+ M C PD +Y ++ C++K
Sbjct: 302 RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEK 361
Query: 456 RMKVLNFLLTHMFK-NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
R+ + L+ M K + + D TY +L+ L + + A F ++ KG Y
Sbjct: 362 RIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGY 421
Query: 515 KMLEEKLEKK-RLGNAKERINKLLA 538
+ L K+ R+ AK+ IN++L+
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEMLS 446
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 14/252 (5%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE-LNNG-YVSLATMSTIMRRLVRGGRY 213
G+ P N ++ L + + E K M+E LN G +++ +T++ +
Sbjct: 554 GFFPGPVEINLLLQSLCRDGR---THEARKFMEECLNKGCAINVVNFTTVIHGFCQNDEL 610
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY----KVFLEFKDCIPLSSQIF 269
D A+ M D + L+DTL K + A K+ + D P++ +
Sbjct: 611 DAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVT---Y 667
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+IH +C+ KVDD +++M + + Y IE C + D L ++
Sbjct: 668 RTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLR 725
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+ T +M K A KV +M + + +PD L L G+V +
Sbjct: 726 TASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDE 785
Query: 390 ANEIFEDMKKQG 401
A+++ + ++G
Sbjct: 786 ADKLMLRLVERG 797
>gi|357131182|ref|XP_003567219.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Brachypodium distachyon]
Length = 518
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/434 (27%), Positives = 202/434 (46%), Gaps = 6/434 (1%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
VD + + + L+ CG + S +LV L R N A F WA Q
Sbjct: 70 VDAVVAAAEGSHADATRARTLLERCGAAASETLVVAALSRLRNSWAAAHAAFLWAAAQPD 129
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
Y ++M+ +L K ++F L+ EM S + ++RR A
Sbjct: 130 YAPGRHACHSMLAILAKHRRFDDARALLDEMR--RKSLASPRAVLLLVRRYCAARDVTRA 187
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
+ AF + +G E L+ L + +V+ A + L + P ++ FNI+++GW
Sbjct: 188 IAAFHALPSFGFEPGVAQFHGLLSALCRYKNVQDAEHLLLSSEKEFPFETKSFNIVLNGW 247
Query: 277 CKTR-KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
C V +A++ M +G DV SY I + + V M+E G P
Sbjct: 248 CNMVCSVREAKRFWTAMEVRGIERDVASYGSMISCFSKAGSLDSVLKLFNGMKEAGIVPD 307
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
Y V++AL K + ++EA + M+ PDT+ Y+SLI L KA +V++A ++F+
Sbjct: 308 RKVYNAVVYALAKGRCVDEAKALVRSMEERGTPPDTATYNSLIGPLCKARQVQEATQMFD 367
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M +G++ +V T++ + A + SE +L KM+ C+P+ +TY L++ CR +
Sbjct: 368 EMIGRGLLASVRTFHALFDVATSPSE---VFDVLDKMKTLHCEPEIDTYIMLIRKFCRWR 424
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ + L + M N ++ D Y L+ GL +GKLE A ++EEM +KG P T
Sbjct: 425 QHDSVEKLWSAMPTNGLNPDRSAYIVLIHGLFLNGKLEEAAKYYEEMKAKGFPPEQKTES 484
Query: 516 MLEEKLEKKRLGNA 529
M++ L + L A
Sbjct: 485 MIQAWLTGRELAKA 498
>gi|125542844|gb|EAY88983.1| hypothetical protein OsI_10467 [Oryza sativa Indica Group]
Length = 525
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 220/453 (48%), Gaps = 14/453 (3%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFS---NDLTPAFGFFTW 150
+ D D + ++++ +P + AL GV++S L++ LRRF D A +
Sbjct: 35 DADADAVYRMVTAA-PTPSAMESALSASGVAISAPLLDLVLRRFRFAHGDPLRALSLLSL 93
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A + G +P +T + VLG++++F MW+L++ L V+ T ++ R+ +
Sbjct: 94 ALDRHGVAPSPFALDTALYVLGRARRFAHMWDLLRSSRRLVPDAVTPRTAMVVLGRVAKV 153
Query: 211 GRYDDAVEAFRGMKKY----GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS 266
+ V++FR + + G +++ + + L+ TL + S+ A V+ K ++
Sbjct: 154 CSVRETVDSFRRLSRMLRGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYEFKVNR 213
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
Q FNIL+ GW + +DA+ + EM + G PD+V+Y I+ +C+ + L E
Sbjct: 214 QTFNILLSGW---KSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDE 270
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M+EK P VITYT ++ LG Q ++A + ++M C PD Y++ I A R
Sbjct: 271 MREKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKR 330
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ DA + E+M +G++PN TYN + +A +L ++M + C P+ ++
Sbjct: 331 LGDAFALMEEMASKGLMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMF 390
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++++C R R+ L + M N L L + GKL+ A F +MI G
Sbjct: 391 IVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELG 450
Query: 507 IVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
P + ++ ++ ++ L N +E I +L A
Sbjct: 451 QKPSNVAFRRIKILMQ---LANREESIARLTAQ 480
>gi|115451461|ref|NP_001049331.1| Os03g0208600 [Oryza sativa Japonica Group]
gi|26006498|gb|AAN77307.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108706773|gb|ABF94568.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547802|dbj|BAF11245.1| Os03g0208600 [Oryza sativa Japonica Group]
Length = 531
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 220/453 (48%), Gaps = 14/453 (3%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFS---NDLTPAFGFFTW 150
+ D D + ++++ +P + AL GV++S L++ LRRF D A +
Sbjct: 41 DADADAVYRMVTAA-PTPSAMESALSASGVAISAPLLDLVLRRFRFAHGDPLRALSLLSL 99
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A + G +P +T + VLG++++F MW+L++ L V+ T ++ R+ +
Sbjct: 100 ALDRHGVAPSPFALDTALYVLGRARRFAHMWDLLRSSRRLVPDAVTPRTAMVVLGRVAKV 159
Query: 211 GRYDDAVEAFRGMKKY----GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS 266
+ V++FR + + G +++ + + L+ TL + S+ A V+ K ++
Sbjct: 160 CSVRETVDSFRRLSRMLRGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYEFKVNR 219
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
Q FNIL+ GW + +DA+ + EM + G PD+V+Y I+ +C+ + L E
Sbjct: 220 QTFNILLSGW---KSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDE 276
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M+EK P VITYT ++ LG Q ++A + ++M C PD Y++ I A R
Sbjct: 277 MREKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKR 336
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ DA + E+M +G++PN TYN + +A +L ++M + C P+ ++
Sbjct: 337 LGDAFALMEEMASKGLMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMF 396
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++++C R R+ L + M N L L + GKL+ A F +MI G
Sbjct: 397 IVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELG 456
Query: 507 IVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
P + ++ ++ ++ L N +E I +L A
Sbjct: 457 QKPSNVAFRRIKILMQ---LANREESIARLTAQ 486
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/322 (32%), Positives = 166/322 (51%), Gaps = 3/322 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE- 257
T + ++ L + G++D+A R M G DT S L+D L K S E A++V +
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDV 187
Query: 258 FKDCIPLSSQIFNILIHGWC-KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ + S F +I C K V+ A K + + +GF+P V+ + I +C+ KD
Sbjct: 188 IQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKD 247
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
L+ M EKGC P+V T+TI++ L KA ++ EA ++ EKM C P+ YS+
Sbjct: 248 LDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYST 307
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L K G+V DA E+F+ M+++ PNV+T+N +I C E A +L +M E
Sbjct: 308 VINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETG 367
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS-MDAGTYASLVRGLIESGKLELA 495
C PD TY L+ C+ ++ L + ++ VS +A TY++L G G++ A
Sbjct: 368 CAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADA 427
Query: 496 CSFFEEMISKGIVPYHSTYKML 517
C F ++ KG P +TY L
Sbjct: 428 CRIFSMLVDKGFSPDLATYTSL 449
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 171/388 (44%), Gaps = 24/388 (6%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-----TMS 201
FF WA+++ G H N +D+L C + + + N + T
Sbjct: 10 FFDWARSRVG--HNVFSCNCALDML------CRLNRRQEALALFRNAMARICMPNKFTYG 61
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KD 260
++R G D A++ MK G E + + LM L V A + F KD
Sbjct: 62 ILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD 121
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR----EKD 316
C P + L+H CK K D+AQ ++EM QG +PD V+++ I+ C+ E+
Sbjct: 122 CAP-DVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQA 180
Query: 317 FRKVDDTLKEMQEKGCKPSVITY-TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
FR ++D + ++G S + TI+ K + A KV + + P ++
Sbjct: 181 FRVLEDVI----QRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFN 236
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I KA + A ++ E M ++G VPNV T+ +I+ C + A +LL+KM
Sbjct: 237 LVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMG 296
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C P+ TY+ ++ C++ ++ L M + + + T+ L+ GL ++ ++E A
Sbjct: 297 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 356
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ M G P TY L + L K
Sbjct: 357 RQLYHRMRETGCAPDIITYNSLIDGLCK 384
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 174/399 (43%), Gaps = 49/399 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+T+++ L K + +EL + M E N ++ T + ++ L + R ++A + + M
Sbjct: 305 YSTVINGLCKQGQVDDAYELFQLM-ERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 363
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS------SQIFNILIHGWC 277
++ G D + L+D L K V+ A+++F IP S + ++ L HG+
Sbjct: 364 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLF----QTIPESGVSAANAVTYSTLFHGYA 419
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR---------------EKDFRKVDD 322
++ DA + + +GFSPD+ +YT I YC+ K F +
Sbjct: 420 ALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVN 479
Query: 323 TLK--------------------EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
TL M +GC + Y +V+ + +A + ++AL V E++
Sbjct: 480 TLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQV 539
Query: 363 --KSDDCL-PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
K D P +S +L+ L + G+ DA ++ M ++G V +YN ++S
Sbjct: 540 IDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRL 599
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ A ++ + M P+ T ++ C ++ L+ M K D T
Sbjct: 600 QRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETC 659
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
+L+ G +SG+ +LA EEM G+ P +T+ +LE
Sbjct: 660 NTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLLE 698
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 151/336 (44%), Gaps = 19/336 (5%)
Query: 120 GCG--VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVD---VLGKS 174
GC + NSL++ + F D AF F Y+T+ LG+
Sbjct: 367 GCAPDIITYNSLIDGLCKSFQVD--EAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRM 424
Query: 175 KKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR 233
C ++ ++ ++ G+ LAT ++++ + R + VE M G
Sbjct: 425 ADACRIFSML-----VDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVN 479
Query: 234 ALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKE 291
LS ++ L +GN E A ++F + + C + I+N+++ G + K D A +++
Sbjct: 480 TLSAVLGGLFEGNHTERAIQLFDSMAARGCTD-DALIYNLVVEGMARASKHDKALAVLEQ 538
Query: 292 MFQ---QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+ + F+P + +E C+ L +M E+G +V +Y ++ L +
Sbjct: 539 VIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSR 598
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
++ +EA +V+E M S P+ S + +I L A +V DA E+ + M K G P++ T
Sbjct: 599 LQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIET 658
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
NT+I C + A KLL++M E +P+ T+
Sbjct: 659 CNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTH 694
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 4/157 (2%)
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+F D + V NV + N + C + + AL L + +C P+ TY L++
Sbjct: 9 LFFDWARSRVGHNVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFS 68
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ + LL M + +A + +L++GL ++G++ A F M +K P
Sbjct: 69 SAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVM 127
Query: 513 TYKMLEEKLEKK-RLGNAKERINKLLAH--AKEQKTF 546
TY L L K + A+ + +++A A + TF
Sbjct: 128 TYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTF 164
>gi|222624423|gb|EEE58555.1| hypothetical protein OsJ_09859 [Oryza sativa Japonica Group]
Length = 858
Score = 172 bits (437), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 220/453 (48%), Gaps = 14/453 (3%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFS---NDLTPAFGFFTW 150
+ D D + ++++ +P + AL GV++S L++ LRRF D A +
Sbjct: 41 DADADAVYRMVTAA-PTPSAMESALSASGVAISAPLLDLVLRRFRFAHGDPLRALSLLSL 99
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A + G +P +T + VLG++++F MW+L++ L V+ T ++ R+ +
Sbjct: 100 ALDRHGVAPSPFALDTALYVLGRARRFAHMWDLLRSSRRLVPDAVTPRTAMVVLGRVAKV 159
Query: 211 GRYDDAVEAFRGMKKY----GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS 266
+ V++FR + + G +++ + + L+ TL + S+ A V+ K ++
Sbjct: 160 CSVRETVDSFRRLSRMLRGRGDDQEGQLFNALLRTLCQEKSMSDARNVYHALKYEFKVNR 219
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
Q FNIL+ GW + +DA+ + EM + G PD+V+Y I+ +C+ + L E
Sbjct: 220 QTFNILLSGW---KSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDE 276
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M+EK P VITYT ++ LG Q ++A + ++M C PD Y++ I A R
Sbjct: 277 MREKDISPDVITYTSLIGGLGLIGQPDKAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKR 336
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ DA + E+M +G++PN TYN + +A +L ++M + C P+ ++
Sbjct: 337 LGDAFALMEEMASKGLMPNATTYNLFFRCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMF 396
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++++C R R+ L + M N L L + GKL+ A F +MI G
Sbjct: 397 IVRLCHRHGRVAQALELWSDMVNNGFGSFTLVSDVLFDLLCDEGKLDEAERCFHQMIELG 456
Query: 507 IVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
P + ++ ++ ++ L N +E I +L A
Sbjct: 457 QKPSNVAFRRIKILMQ---LANREESIARLTAQ 486
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 188/408 (46%), Gaps = 3/408 (0%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKK 176
AL + ++V L RF + P++ FF WA G+ HT Y M+ +LGK+++
Sbjct: 186 ALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLHILGKTRQ 245
Query: 177 FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALS 236
F +M +++EM ++ G +S+ ++ G +AV F MKK G + + +
Sbjct: 246 FEMMVAIIQEMGKV--GALSMDAFKVAIKSFAAAGEIKNAVGVFELMKKNGFDDGVESFN 303
Query: 237 VLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L+ L A +VF + + + L+ WC R + +A + EM ++G
Sbjct: 304 CLLVALANEGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKG 363
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
PDVV + IE R + + + M+ KG P+V TYT+++ K +++ A+
Sbjct: 364 MKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDMAM 423
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ +E+M+ C PD + Y+ L+ A R+ + E+M ++G P+ TYN +I
Sbjct: 424 ECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLL 483
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN-FLLTHMFKNDVSMD 475
R ++A ++ +KM + +P TY ++K R + + M + + D
Sbjct: 484 TNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPD 543
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+Y + G I G+ E A + EEMI+KG+ Y K
Sbjct: 544 VNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYNKFAADFSK 591
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 122/264 (46%), Gaps = 2/264 (0%)
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++H KTR+ + ++EM + G + + ++ I+ + + + + M++ G
Sbjct: 236 MLHILGKTRQFEMMVAIIQEMGKVG-ALSMDAFKVAIKSFAAAGEIKNAVGVFELMKKNG 294
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
V ++ ++ AL EA +V++KM PD Y++L+ A + +A
Sbjct: 295 FDDGVESFNCLLVALANEGLGREARQVFDKMHGQYS-PDLRSYTALMLAWCNARNLVEAG 353
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++ +M ++G+ P+V+ +NTMI ALK+ + M+ P+ TY L++
Sbjct: 354 RVWNEMLEKGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIRDH 413
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++ +M + M + D TY L+ G + +++ + EEM KG P
Sbjct: 414 CKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDA 473
Query: 512 STYKMLEEKLEKKRLGNAKERINK 535
TY L + L +++ + RI K
Sbjct: 474 RTYNALIKLLTNRKMPDDAARIYK 497
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 105/230 (45%), Gaps = 11/230 (4%)
Query: 163 MYNTMVDVL--GKSKKFCL-MWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
++NTM++ L G+ + L M+EL+K N + T + ++R + G+ D A+E
Sbjct: 370 VHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVW----TYTMLIRDHCKRGKMDMAMEC 425
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWC 277
F M++ + D + L+ ++ V E K C P ++ +N LI
Sbjct: 426 FEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPP-DARTYNALIKLLT 484
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY-CREKDFRKVDDTLKEMQEKGCKPSV 336
+ DDA + K+M ++G P + +Y ++ Y ++++ +EM +G P V
Sbjct: 485 NRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPDV 544
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
+YT+ ++ + + EA K E+M + Y+ SKAG+
Sbjct: 545 NSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYNKFAADFSKAGK 594
>gi|224085974|ref|XP_002307761.1| predicted protein [Populus trichocarpa]
gi|222857210|gb|EEE94757.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 125/451 (27%), Positives = 204/451 (45%), Gaps = 11/451 (2%)
Query: 98 DKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGY 157
+K+ + ++ + + AL C V +S +V + L R + FF WA Q
Sbjct: 104 EKLRGVFVQKIKGKSGIERALTECSVDLSLDVVAEVLNRGNLGGEAMIMFFNWAIKQPMI 163
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL--ATMSTIMRRLVRGGRYDD 215
+ YN ++ LG+ K M VK + EL VS+ T S ++ LVR R
Sbjct: 164 SKDVDSYNVVIRALGRRKFIDFM---VKFLHELRVEGVSMNSETFSIVIDSLVRARRVYK 220
Query: 216 AVEAFRGMKK-YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
A++ F +++ +G E+D +L+VL+ L + + V A F K IP + +N++I
Sbjct: 221 AIQMFGNLEEEFGFERDAESLNVLLQCLCRRSHVGAANSYFNSVKGKIPFNCMTYNVIIG 280
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
GW K +V + Q+ +EM + GFSPD +S++ +E R M+EKGC P
Sbjct: 281 GWSKFGRVSEMQRVFEEMEEDGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVP 340
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
Y ++ +E +K Y + S +C P+ Y+ +I L KA +V DA E+F
Sbjct: 341 DTNVYNAMISNFISVGNFDECMKYYRCLLSKNCDPNIDTYTRMISGLIKASKVADALEMF 400
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M +G+V T + I C+ A+ + K + CK Y LL R
Sbjct: 401 DEMLDRGMVTKTGTVTSFIEPLCSFGPPHAAMVIYTKARKVGCKISLSAYKLLLMRLSRF 460
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ ++ + M ++ S D Y L+ GL G+ E A EE + KG P
Sbjct: 461 GKCGMMLKIWDEMQESGYSSDMEVYEYLISGLCNIGQFENAVLVMEESMRKGFCP----S 516
Query: 515 KMLEEKLEKKRLGNAK-ERINKLLAHAKEQK 544
+ + KL K L + K ER +L K +
Sbjct: 517 RFICSKLNNKLLASNKVERAYRLFLKIKHAR 547
>gi|10177952|dbj|BAB11311.1| unnamed protein product [Arabidopsis thaliana]
Length = 680
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 124/464 (26%), Positives = 212/464 (45%), Gaps = 10/464 (2%)
Query: 61 DEDFVIPSLAGW--VESHRLN---EKSRISSRVLSENHETDVDKISKILSKQYQSPDKVV 115
DE +V+ L+ + S++ + E S ++V ++ + DK+ + ++ + +
Sbjct: 46 DESYVLAELSSLLPISSNKTSVSKEDSSSKNQVAIDSFLSAEDKLRGVFLQKLKGKSAIQ 105
Query: 116 EALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSK 175
++L G+ +S +V L R + FF WA + G Y+ ++ LG+ K
Sbjct: 106 KSLSSLGIGLSIDIVADVLNRGNLSGEAMVTFFDWAVREPGVTKDVGSYSVILRALGRRK 165
Query: 176 KFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR 233
F M +++K M + +N L ++ M VR A+E F + +GV+ T
Sbjct: 166 LFSFMMDVLKGMVCEGVNP---DLECLTIAMDSFVRVHYVRRAIELFEESESFGVKCSTE 222
Query: 234 ALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
+ + L+ L + + V A VF K IP S +NI+I GW K +V++ +K +KEM
Sbjct: 223 SFNALLRCLCERSHVSAAKSVFNAKKGNIPFDSCSYNIMISGWSKLGEVEEMEKVLKEMV 282
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
+ GF PD +SY+ IE R + ++ KG P Y ++ A+ +
Sbjct: 283 ESGFGPDCLSYSHLIEGLGRTGRINDSVEIFDNIKHKGNVPDANVYNAMICNFISARDFD 342
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
E+++ Y +M ++C P+ YS L+ L K +V DA EIFE+M +GV+P + +
Sbjct: 343 ESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFEEMLSRGVLPTTGLVTSFL 402
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C+ A+ + QK + C+ Y LLK R + +L + M ++
Sbjct: 403 KPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFGKCGMLLNVWDEMQESGYP 462
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
D Y +V GL G LE A EE + KG P Y L
Sbjct: 463 SDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYSRL 506
>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
Length = 896
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 110/381 (28%), Positives = 185/381 (48%), Gaps = 5/381 (1%)
Query: 143 PAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMS 201
PA+ F A +Q G Y +++D LGK + L + M L+ G+ + +
Sbjct: 444 PAYEMFETA-SQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENM--LDTGHNANPVVYT 500
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
+++R GR +D + F+ M + G + D L+ MD + K VE +F + K
Sbjct: 501 SLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGY 560
Query: 262 IPLSS-QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
L + ++ILIHG K + + M QQGF+ D +Y ++ +C+ K
Sbjct: 561 GFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKA 620
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+ L+EM+ K P+V TY ++ L K +++EA ++E+ KS + YSSLI
Sbjct: 621 YEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDG 680
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
K GR+ +A I E+M K+G+ PNV T+N+++ + E AL Q M+E C P+
Sbjct: 681 FGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPN 740
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY+ L+ CR ++ M K + + TY +++ GL + G + ACS FE
Sbjct: 741 TYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFE 800
Query: 501 EMISKGIVPYHSTYKMLEEKL 521
+ G P +++ L E +
Sbjct: 801 RFKANGGTPDAASFNALIEGM 821
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/382 (26%), Positives = 183/382 (47%), Gaps = 23/382 (6%)
Query: 164 YNTMVDVLGKSKKF---CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
+N+++ LGK +K ++E +K+ E N+ +T + I+ L G+ ++A
Sbjct: 360 FNSILTCLGKKRKVDEALTLFEAMKKDAEPNS-----STYNIIIDMLCMAGKVEEAYMIR 414
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCK 278
M+ G+ + +++++D L K E AY++F + C P +S + LI G K
Sbjct: 415 DEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNP-NSVTYCSLIDGLGK 473
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY---CREKDFRKVDDTLKEMQEKGCKPS 335
VDDA + + M G + + V YT I ++ R++D K+ KEM +GC+P
Sbjct: 474 KGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKI---FKEMNRRGCQPD 530
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ M + KA + + ++E +K LPD YS LI L+KAG+ ++ + IF
Sbjct: 531 LTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFH 590
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
MK+QG + YN ++ C + + A ++L++M+ P TY ++ +
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKID 650
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
R+ L + ++ Y+SL+ G + G+++ A EEM+ KG+ P T+
Sbjct: 651 RLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWN 710
Query: 516 MLEEKLEKKRLGNAKERINKLL 537
L + L K E IN+ L
Sbjct: 711 SLMDALVK------AEEINEAL 726
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 107/434 (24%), Positives = 182/434 (41%), Gaps = 75/434 (17%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF + + + + YN ++ L S M ++++EM L G + A + ++
Sbjct: 100 FFLASSAASPHPLPADAYNAVLPFL--SHDLAAMEKVLEEMSVLGYGVPNPAC-ADLVSA 156
Query: 207 LVRGGRYDD-----------------------------------AVEAFRGMKKYGVEKD 231
LVR R DD A+E R M++ G E
Sbjct: 157 LVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVGYEVG 216
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
+ L+ L + VE A + E K C+ ++N+ I + K VD A K
Sbjct: 217 VPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFH 276
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ---------------------- 328
E+ QG PD VSYT I C+ + ++ +M+
Sbjct: 277 ELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAG 336
Query: 329 -------------EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
E+GC PSV+++ ++ LGK ++++EAL ++E MK D P++S Y+
Sbjct: 337 QFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKK-DAEPNSSTYN 395
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I +L AG+V++A I ++M+ G+ PN+LT N M+ C + E A ++ + +
Sbjct: 396 IIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQR 455
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C P+ TY L+ +K + L +M + + Y SL+R G+ E
Sbjct: 456 GCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDG 515
Query: 496 CSFFEEMISKGIVP 509
F+EM +G P
Sbjct: 516 HKIFKEMNRRGCQP 529
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 179/386 (46%), Gaps = 2/386 (0%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
+ ++ A+ FF K+Q G Y +M+ VL K+ + EL +M E
Sbjct: 265 AGNVDMAWKFFHELKSQ-GLKPDDVSYTSMIWVLCKAGRLSEAEELFGQM-ETERAVPCA 322
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
+T++ G++++A + +K+ G + + ++ L K V+ A +F
Sbjct: 323 YAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKRKVDEALTLFEA 382
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K +S +NI+I C KV++A EM G P++++ ++ C+ K F
Sbjct: 383 MKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKF 442
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + ++GC P+ +TY ++ LGK +++A +++E M + Y+SL
Sbjct: 443 EPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSL 502
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I GR +D ++IF++M ++G P++ NT + + E + + ++
Sbjct: 503 IRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGF 562
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD +Y+ L+ + + + + + M + ++DA Y ++V G +SGKL+ A
Sbjct: 563 LPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYE 622
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
EEM K + P +TY + + L K
Sbjct: 623 VLEEMKVKRVPPTVATYGSIIDGLAK 648
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 130/257 (50%), Gaps = 2/257 (0%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A Q G+ YN +VD KS K +E+++EM ++ ++AT +I+ L +
Sbjct: 591 AMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEM-KVKRVPPTVATYGSIIDGLAKI 649
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIF 269
R D+A F K G+E + S L+D K ++ AY + E K + + +
Sbjct: 650 DRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 709
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N L+ K ++++A + M + SP+ +Y+ I CR + + K +EMQ+
Sbjct: 710 NSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQK 769
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+G P+V+TYT ++ L K I +A ++E+ K++ PD + +++LI +S A R +
Sbjct: 770 QGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNALIEGMSHANRAIE 829
Query: 390 ANEIFEDMKKQGVVPNV 406
A +FE+ + +G NV
Sbjct: 830 AYHVFEETRLKGCRINV 846
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 108/240 (45%)
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+K ++EM G+ + + R + + + M+ +P+ YT+++ A
Sbjct: 132 EKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGA 191
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
+ +A+Q AL++ +M+ +++L+ L++ GRV+ A + +++K + P+
Sbjct: 192 MAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPD 251
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
++ YN I + A K +++ KPD +Y ++ + C+ R+ L
Sbjct: 252 IVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFG 311
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
M A Y +++ G +G+ E A +++ +G +P ++ + L KKR
Sbjct: 312 QMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKR 371
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 118/452 (26%), Positives = 228/452 (50%), Gaps = 18/452 (3%)
Query: 92 NHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRR--FSN-DLTPAFGFF 148
N + VD I I+S S + + ++LK GV +SN L+++ L+R FS+ + A FF
Sbjct: 38 NKDIQVDAIYNIISNSTSSQN-LKQSLKSTGVFLSNDLIDKVLKRVRFSHGNPLQALDFF 96
Query: 149 TWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLV 208
+ + G+ H+ +TM+ +LG+S+KF +W+++ ++ + ++ T+ ++ R+
Sbjct: 97 NFTADRRGFYHSSYSLDTMLYILGRSRKFDHIWDVLIDIKRKDRNLITPRTLQVVLGRVA 156
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
+ VE+F K+ DT + L+ TL + S+ A V+ K + Q
Sbjct: 157 KVCSVRMTVESFWKFKRLVPVFDTSCFNALLRTLCQEKSMSDARNVYHHLKKGFRPNLQT 216
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FNIL+ GW + ++A+ +EM + G PD+V+Y I+ +C+ ++ K + M+
Sbjct: 217 FNILLSGW---KSSEEAELFYEEMKELGVKPDIVTYNSLIDVFCKGRELEKAYGVVARMR 273
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E+ P VITYT ++ LG Q ++A + ++MK C PD + Y+++I A R+
Sbjct: 274 EEDILPDVITYTSIIGGLGLVGQPDKARDMLKEMKEHGCYPDVAAYNAVIRNYCIAKRLD 333
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
A + +M+ +G+ PN +YN ++ N+ +M + C P+ ++ L+
Sbjct: 334 AAYSLMAEMESKGMSPNATSYNLFFRVFSWSNDLRNSWDFYGRMMDAGCLPNTQSCMFLI 393
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA----SLVRGLIESGKLELACSFFEEMIS 504
K+ R ++++ + ++ + V G+Y L+ L + GKL A F +M+
Sbjct: 394 KLFKRHEKVE----MALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAEKCFLQMVE 449
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
KG P + +++ ++ +E L N + I L
Sbjct: 450 KGHKPSNVSFRRIKVLME---LANKHDAIRNL 478
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 87/201 (43%), Gaps = 4/201 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y +++ LG + +++KEM E + Y +A + ++R R D A M
Sbjct: 284 YTSIIGGLGLVGQPDKARDMLKEMKE-HGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEM 342
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
+ G+ + + ++ N + +++ + D C+P ++Q LI + + K
Sbjct: 343 ESKGMSPNATSYNLFFRVFSWSNDLRNSWDFYGRMMDAGCLP-NTQSCMFLIKLFKRHEK 401
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V+ A + +M ++GF ++ + C + + +M EKG KPS +++
Sbjct: 402 VEMALQLWNDMVEKGFGSYILVSDVLLGMLCDMGKLVEAEKCFLQMVEKGHKPSNVSFRR 461
Query: 342 VMHALGKAKQINEALKVYEKM 362
+ + A + + + EKM
Sbjct: 462 IKVLMELANKHDAIRNLSEKM 482
>gi|357166306|ref|XP_003580667.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Brachypodium distachyon]
Length = 441
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 189/383 (49%), Gaps = 6/383 (1%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTP--EMYNTMVDVLGKSKKFCLMWELVKEM 187
V +TL ++ND A FF W+ + G P + +D+LGK +F L L+
Sbjct: 37 VLETLSLYTNDWRRALDFFHWSASPAGANLPPTAATLSRAIDILGKHFEFPLATSLLLSH 96
Query: 188 DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS 247
+ ++ + ++ RL DDAV F +D + +L+D L
Sbjct: 97 HDPSDPAFLRPALRALLNRLAAANLVDDAVRVFESTAGSIGLRDEASFHLLIDALCDHRR 156
Query: 248 VEHAYKV-FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
V+ A+ + F + P ++ N+L+ GW KTR ++ +M +G + D+ SY+
Sbjct: 157 VDEAHHLCFGKAPPPFPPGTKTHNLLLRGWAKTRAWTRLRQHWFDMDNRGVAKDLHSYSI 216
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
+++ + K KEM++K ++ Y +HA+G A+ ++ ++++Y +M
Sbjct: 217 YMDALAKSGKPWKAVKVFKEMKQKRLPVDIVAYNTAIHAIGLAQGVDFSVRLYRQMVDAG 276
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C P+T+ +++++ +L K GR ++ + M K G PNVLTY+ S + L
Sbjct: 277 CKPNTATFNTIVKLLCKEGRFREGYAFVQQMHKAGCEPNVLTYHCFFQYL---SRPQEVL 333
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
L +KM E C+P +TY L+K R ++ + F+ M + +S DA Y +L+ L
Sbjct: 334 VLFEKMLERGCRPRMDTYVMLIKRFGRWGFLRPVFFVWKTMEEQGLSPDAFAYNTLIDAL 393
Query: 487 IESGKLELACSFFEEMISKGIVP 509
+E G ++LA + EEM++KG+ P
Sbjct: 394 LEKGMVDLARKYDEEMLAKGLSP 416
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 108/421 (25%), Positives = 197/421 (46%), Gaps = 5/421 (1%)
Query: 90 SENHETDVDKI-SKILSKQYQSPDKVVEA-LKGCGVSVSNSLVEQTLRRFSNDLTPAFGF 147
+ +H V ++ + I D +EA L +S +LV L RF + P+ F
Sbjct: 165 ASSHPEHVGRVCAAIADVMAAGADANLEATLSALSPPLSEALVLAVLDRFKHAHRPSRRF 224
Query: 148 FTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRL 207
F WA + HTP Y M+ +LGK+++F M LV+EM + G + + ++
Sbjct: 225 FQWAAASDEFEHTPVTYCKMLHILGKARQFETMVALVQEMGKA--GALCMDAFKIAIKSF 282
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ 267
G +AV F M+ +G + + + L+ L + + A +VF +D +
Sbjct: 283 AAAGEIKNAVGVFEMMRVHGFDDGVESFNCLLVALAQEGLGKEAARVFDRMRDQYTPDLR 342
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+ L+ WC R + +A + +M ++G PDVV + I+ R + + + M
Sbjct: 343 SYTALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELM 402
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+ KG P+V TYT+++ K +++ A++ +E+M+ C P+ + Y+ L+ A R+
Sbjct: 403 KAKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRM 462
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+ E+M ++G P+ TYN +I R+ ++A+++ +KM +P TY +
Sbjct: 463 DRVTAMLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMM 522
Query: 448 LKMCCRKKRMKVLN-FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
+K R + + M + + D +Y + G I G+ AC F EEMI KG
Sbjct: 523 MKSYFLGGRNYAMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPAEACKFLEEMIQKG 582
Query: 507 I 507
+
Sbjct: 583 M 583
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 128/280 (45%), Gaps = 1/280 (0%)
Query: 238 LMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
++ L K E + E L F I I + ++ +A + M GF
Sbjct: 244 MLHILGKARQFETMVALVQEMGKAGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRVHGF 303
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
V S+ C + +E ++ M+++ P + +YT +M A A+ + EA +
Sbjct: 304 DDGVESFNCLLVALAQEGLGKEAARVFDRMRDQ-YTPDLRSYTALMLAWCNARNLVEAGR 362
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
V+ M PD ++++I L + R +A ++FE MK +G PNV TY +I C
Sbjct: 363 VWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHC 422
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
+ + + A++ ++M+ C+P+ TY LL KRM + +L M + D
Sbjct: 423 KQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDGR 482
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
TY +L++ L + A +++MI+KG+ P TY M+
Sbjct: 483 TYNALIKLLTNRNMPDDAVRIYKKMITKGLEPTIHTYNMM 522
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 121/264 (45%), Gaps = 2/264 (0%)
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++H K R+ + ++EM + G + + ++ I+ + + + + M+ G
Sbjct: 244 MLHILGKARQFETMVALVQEMGKAG-ALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRVHG 302
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
V ++ ++ AL + EA +V+++M+ D PD Y++L+ A + +A
Sbjct: 303 FDDGVESFNCLLVALAQEGLGKEAARVFDRMR-DQYTPDLRSYTALMLAWCNARNLVEAG 361
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++ DM ++G+ P+V+ +NTMI A+K+ + M+ P+ TY L++
Sbjct: 362 RVWNDMLEKGMKPDVVVHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDH 421
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++ ++ + M + TY L+ G + +++ + EEM KG P
Sbjct: 422 CKQGKLDMAMRCFEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPPDG 481
Query: 512 STYKMLEEKLEKKRLGNAKERINK 535
TY L + L + + + RI K
Sbjct: 482 RTYNALIKLLTNRNMPDDAVRIYK 505
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 92/242 (38%), Gaps = 46/242 (19%)
Query: 163 MYNTMVDVLGKSKK---FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
++NTM+D L + ++ M+EL+K N + T + ++R + G+ D A+
Sbjct: 378 VHNTMIDGLLRGQRRPEAVKMFELMKAKGPPPNVW----TYTMLIRDHCKQGKLDMAMRC 433
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWC 277
F M+ G + + + L+ ++ + E K C P + +N LI
Sbjct: 434 FEEMQVAGCQPEVATYTCLLVGYGNAKRMDRVTAMLEEMAQKGCPP-DGRTYNALIKLLT 492
Query: 278 KTRKVDDAQKAMK------------------------------------EMFQQGFSPDV 301
DDA + K EM ++G PDV
Sbjct: 493 NRNMPDDAVRIYKKMITKGLEPTIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRKGICPDV 552
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
SYT FI + R + L+EM +KG K I Y KA + + ++ +K
Sbjct: 553 NSYTVFINGHIRHGRPAEACKFLEEMIQKGMKAPQIDYNKFAADFSKAGKPDILYELAQK 612
Query: 362 MK 363
+K
Sbjct: 613 VK 614
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 110/385 (28%), Positives = 187/385 (48%), Gaps = 39/385 (10%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+A + + +Y V M +GV + +L+VL++ L + N V+ A +
Sbjct: 87 SVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSIL 146
Query: 256 LE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ FK I ++ FN LI+G C K+ +A + EM ++G P+V+SY I C+
Sbjct: 147 GKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKT 206
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK------------------------ 350
+ D K+M++ GCKP V+TY ++ +L K +
Sbjct: 207 GNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTY 266
Query: 351 -----------QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
Q+NEA +++++M D +PDT + L+ L K G V +A +FE M +
Sbjct: 267 NCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTE 326
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+GV PN+ TYN ++ C + A K+ + M C P +Y L+ C+ +RM
Sbjct: 327 KGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDE 386
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
LL M+ ++ D TY++L++GL + G+ + A + F+EM S G++P TY +L +
Sbjct: 387 AKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLD 446
Query: 520 KLEKKRLGNAKERINKLLAHAKEQK 544
K G+ E + KLL +E+K
Sbjct: 447 GFCKH--GHLDEAL-KLLKSMQEKK 468
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 183/375 (48%), Gaps = 4/375 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G T +N +++ L K EL EM + G+ ++ + +TI+ L + G
Sbjct: 153 GIHPTASTFNALINGLCNEGKIKEAVELFNEM--VRRGHEPNVISYNTIINGLCKTGNTS 210
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILI 273
AV+ F+ M++ G + D + ++D+L K V A + E D IP + +N ++
Sbjct: 211 MAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMV 270
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
HG+C ++++A + KEM + PD V+ T ++ C+E + + M EKG +
Sbjct: 271 HGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVE 330
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P++ TY +M + +NEA KV+E M C P Y+ LI K+ R+ +A +
Sbjct: 331 PNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSL 390
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+M + + P+ +TY+T++ C + AL + ++M P+ TY+ LL C+
Sbjct: 391 LAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCK 450
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+ LL M + + + + L+ G+ +GKLE+A F ++ + GI P T
Sbjct: 451 HGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRT 510
Query: 514 YKMLEEKLEKKRLGN 528
Y ++ + L K+ L +
Sbjct: 511 YTVMIKGLLKEGLSD 525
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 133/254 (52%), Gaps = 3/254 (1%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
T++ ++ L + G +A F M + GVE + + LMD + A KVF
Sbjct: 299 VTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEI 358
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ + C P +NILI+G+CK+R++D+A+ + EM+ + +PD V+Y+ ++ C+
Sbjct: 359 MIRQGCAP-GVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFG 417
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
++ + KEM G P+++TY+I++ K ++EALK+ + M+ P+ ++
Sbjct: 418 RPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHT 477
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
LI + AG+++ A E+F + G+ P + TY MI + A L +KME+D
Sbjct: 478 ILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 537
Query: 436 LCKPDCETYAPLLK 449
P+ +Y +++
Sbjct: 538 GFLPNSCSYNVMIQ 551
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 123/245 (50%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA + M + P V + F+ + ++K + V +M G +V + +
Sbjct: 69 IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ L + ++ A+ + KM P S +++LI L G++K+A E+F +M ++G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PNV++YNT+I+ C A+ + +KME++ CKPD TY ++ C+ + +
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ M + + TY +V G G+L A F+EM+ + ++P T +L + L
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGL 308
Query: 522 EKKRL 526
K+ +
Sbjct: 309 CKEGM 313
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 117/245 (47%), Gaps = 13/245 (5%)
Query: 123 VSVSNSLVEQ-TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
+S N+L++ L+R N+ F G +H+ YN +++ KS++
Sbjct: 333 ISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPG-VHS---YNILINGFCKSRRMDEAK 388
Query: 182 ELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
L+ EM LN V T ST+M+ L + GR +A+ F+ M YG+ + S+L+
Sbjct: 389 SLLAEMYHKALNPDTV---TYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILL 445
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN--ILIHGWCKTRKVDDAQKAMKEMFQQGF 297
D K ++ A K+ ++ L I + ILI G K++ A++ ++F G
Sbjct: 446 DGFCKHGHLDEALKLLKSMQE-KKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGI 504
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
P + +YT I+ +E + D ++M++ G P+ +Y +++ + + + A++
Sbjct: 505 RPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIR 564
Query: 358 VYEKM 362
+ ++M
Sbjct: 565 LIDEM 569
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 121/383 (31%), Positives = 187/383 (48%), Gaps = 7/383 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +V+ L K++ +E++KEM + + L T ST++ + G D A E R M
Sbjct: 12 YNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREM 71
Query: 224 -KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRK 281
+ G+ D + ++D L + ++ A ++ E K + F+ LI GWC RK
Sbjct: 72 VTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARK 131
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ--EKGC-KPSVIT 338
VD+A K KE+ D VS + I CRE+ + + +EM+ E G KP V+T
Sbjct: 132 VDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVT 191
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT ++ K+ + +A+K+ M+ C+P+ YSSL+ L KAG + A ++F M
Sbjct: 192 YTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMT 251
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+G VPNV+TY T+I CA + + A L+ +M C D +Y LL CR R++
Sbjct: 252 SKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIE 311
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM-ISKGIVPYHSTYKML 517
L M D TY LVRG + +LE A E M + GI P TY ++
Sbjct: 312 EAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIV 371
Query: 518 EEKLEK-KRLGNAKERINKLLAH 539
+ KR A E I +++A
Sbjct: 372 VAGYSRAKRFVEAAEFIQEMIAR 394
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 107/374 (28%), Positives = 187/374 (50%), Gaps = 6/374 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+T+++ K + E+++EM + + T ++++ L R G+ D A E R M
Sbjct: 48 YSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREM 107
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
K GVE D S L+ V+ A K++ E L + + LI G C+ R++
Sbjct: 108 KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRI 167
Query: 283 DDAQKAMKEMFQQ---GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+A + +EM + + PDVV+YT I+ +C+ + K L M+ + C P+V+TY
Sbjct: 168 GEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTY 227
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+ ++H L KA +++AL ++ +M S C+P+ Y++LI L A +V A + ++M
Sbjct: 228 SSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA 287
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+ ++YN ++ C E A +L ++M C PD TY L++ C R++
Sbjct: 288 TCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEE 347
Query: 460 LNFLLTHM-FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
FLL +M + D TY+ +V G + + A F +EMI++ + P TY L
Sbjct: 348 ARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLI 407
Query: 519 EKLEKK-RLGNAKE 531
+ L K R+ +A E
Sbjct: 408 DGLCKAGRVNHAME 421
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 172/353 (48%), Gaps = 7/353 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T S+++ L + G D A++ FR M G + + L+ L + V+ A +
Sbjct: 223 NVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLM 282
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E C P + +N L+ G+C+ ++++A++ KEM + PD ++YTC + +C
Sbjct: 283 DEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNA 342
Query: 315 KDFRKVDDTLKEMQ-EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ L+ M+ G P V+TY+IV+ +AK+ EA + ++M + + P+
Sbjct: 343 SRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVT 402
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
YSSLI L KAGRV A E+ +++ K P+V+TY +I C E AL LL++M
Sbjct: 403 YSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMV 458
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+P T+ ++ CR M LL M + + TY +L+ G +G++E
Sbjct: 459 NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME 518
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKER-INKLLAHAKEQKT 545
+A FE M K + + E+ G K R I+K +A +E ++
Sbjct: 519 IAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRS 571
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 141/328 (42%), Gaps = 75/328 (22%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEM-------------------------------- 292
+ + +N++++G CK R A + +KEM
Sbjct: 8 NERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEI 67
Query: 293 -----FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+ G +PDVV+YT ++ CR+ + + ++EM+ KG +P T++ ++
Sbjct: 68 LREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWC 127
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED----------- 396
A++++EALK+Y+++ + C D S+LI L + R+ +A E+F++
Sbjct: 128 NARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKP 187
Query: 397 ---------------------MKKQGV------VPNVLTYNTMISSACARSEEENALKLL 429
MK GV VPNV+TY++++ C + + AL L
Sbjct: 188 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 247
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
++M C P+ TY L+ C ++ L+ M D +Y +L+ G
Sbjct: 248 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRL 307
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKML 517
G++E A F+EM +K +P TY L
Sbjct: 308 GRIEEAKQLFKEMAAKSCLPDRITYTCL 335
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 122/259 (47%), Gaps = 13/259 (5%)
Query: 152 KTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGG 211
KT G Y+ +V ++K+F E ++EM N ++ T S+++ L + G
Sbjct: 356 KTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAV-TYSSLIDGLCKAG 414
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFN 270
R + A+E + + K D +++++ L + E A + E + + S FN
Sbjct: 415 RVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFN 470
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+I C+ +D+A K + M G P +V+YT +E + R + + M+ K
Sbjct: 471 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRK 530
Query: 331 GCKPSVIT-------YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
K S ++ ++ L KA++I++A+ V E+++S +C P +++ L +
Sbjct: 531 AKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLR 590
Query: 384 AGRVKDANEIFEDMKKQGV 402
AGR ++A ++ + K G+
Sbjct: 591 AGRTEEAGKLINSISKVGL 609
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 122/257 (47%), Gaps = 20/257 (7%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMK-KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T + ++R R ++A MK G++ D S+++ + A + E
Sbjct: 331 TYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQE 390
Query: 258 F--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
++ P ++ ++ LI G CK +V+ A + +K + + PDVV+YT IE C
Sbjct: 391 MIARNVAP-NAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEGLCGTD 445
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ L+EM K +PSV T+ V+ AL + ++EA K+ M + P Y+
Sbjct: 446 RTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYT 505
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQG--------VVPNVLTYNTMISSACARSEEENALK 427
+L+ S+ GR++ A E+FE M+++ +VP ++ +I C E + A+
Sbjct: 506 TLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMA 564
Query: 428 LLQKMEEDLCKP---DC 441
+++++ C+P DC
Sbjct: 565 VVEELRSRECEPAEEDC 581
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 107/383 (27%), Positives = 196/383 (51%), Gaps = 7/383 (1%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW--ELVKEMDELNNGYVS 196
N + A AK+ +G+M YN+++D + +S+ + E+ +EM + +
Sbjct: 156 NMIDQAVNTINLAKS-SGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIR-SRVSPN 213
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF- 255
+ T + ++R G + F M++ G + + L+D K ++ A+ +
Sbjct: 214 VYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLK 273
Query: 256 -LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ K P + +N++I+G C+ + +A + ++EM +GF+PD V+Y + YC+E
Sbjct: 274 SMSSKGMQP-NLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKE 332
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+F + EM G PSV+TYT +++++ KA+ +N A++ +++M+ P+ Y
Sbjct: 333 GNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTY 392
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI S+ G + +A I +M + G P+V+TYN I C E AL ++Q+M E
Sbjct: 393 TTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVE 452
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD +Y+ ++ CRK + + M + VS DA TY+SL++GL E +L
Sbjct: 453 KGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTE 512
Query: 495 ACSFFEEMISKGIVPYHSTYKML 517
AC +EM+ G+ P TY L
Sbjct: 513 ACDLSQEMLDMGLPPDEFTYTTL 535
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 190/386 (49%), Gaps = 13/386 (3%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMD-----ELNNGYVSLATMSTIMRRLVRGGRYD 214
+P +Y + + G FC + EL K + E N ++ T +T++ + GR D
Sbjct: 211 SPNVYTYNILIRG----FCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 266
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNIL 272
+A + M G++ + + +V+++ L + S++ A+++ E +K P +N L
Sbjct: 267 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP-DEVTYNTL 325
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
++G+CK A EM + G SP VV+YT I C+ ++ + + +M+ +G
Sbjct: 326 LNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL 385
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+P+ TYT ++ + +NEA ++ +M P Y++ I R+++A
Sbjct: 386 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 445
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ ++M ++G+ P+V++Y+T+IS C + E + A ++ Q+M E PD TY+ L++ C
Sbjct: 446 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 505
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+R+ L M + D TY +L+ G L A +EMI KG +P
Sbjct: 506 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 565
Query: 513 TYKMLEEKLEKK-RLGNAKERINKLL 537
TY +L L K+ R AK + KL+
Sbjct: 566 TYSVLINGLNKQARTREAKRLLFKLI 591
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 181/386 (46%), Gaps = 21/386 (5%)
Query: 160 TPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
TP+ YNT+++ G K+ LV + + NG S+ T + ++ + + + A
Sbjct: 316 TPDEVTYNTLLN--GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 373
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHG 275
+E F M+ G+ + R + L+D + + AY++ E + S +N IHG
Sbjct: 374 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 433
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
C ++++A ++EM ++G +PDVVSY+ I +CR+ + + +EM EKG P
Sbjct: 434 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 493
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+TY+ ++ L + +++ EA + ++M PD Y++LI G + A + +
Sbjct: 494 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 553
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC---- 451
+M +G +P+ +TY+ +I+ ++ A +LL K+ + P TY L++ C
Sbjct: 554 EMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIE 613
Query: 452 -----------CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
C K M + + M + + Y ++ G G L A + ++
Sbjct: 614 FKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYK 673
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRL 526
EMI G VP+ T L + L K+ +
Sbjct: 674 EMIHSGFVPHTVTVITLIKALFKEGM 699
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 132/271 (48%), Gaps = 2/271 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV--DD 322
SS +F++++ + +D A + GF P V+SY ++ R + K+ ++
Sbjct: 141 SSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEE 200
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+EM P+V TY I++ ++ + L + +M+ + CLP+ Y++LI
Sbjct: 201 VYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYC 260
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K GR+ +A + + M +G+ PN+++YN +I+ C + A ++L++M PD
Sbjct: 261 KMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 320
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY LL C++ + M +N VS TY +L+ + ++ L A FF++M
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+G+ P TY L + ++ L N RI
Sbjct: 381 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRI 411
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/395 (20%), Positives = 161/395 (40%), Gaps = 55/395 (13%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-S 196
+ +L A FF + + G Y T++D + + ++ EM E +G+ S
Sbjct: 367 ARNLNRAMEFFDQMRIR-GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTE--SGFSPS 423
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T + + R ++A+ + M + G+ D + S ++ + ++ A+++
Sbjct: 424 VVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQ 483
Query: 257 EF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E + + + ++ LI G C+ R++ +A +EM G PD +YT I YC E
Sbjct: 484 EMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEG 543
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK------AKQI----------------- 352
D K EM KG P +TY+++++ L K AK++
Sbjct: 544 DLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYD 603
Query: 353 ---------------------------NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
+EA +V+E M + P + Y+ +I + G
Sbjct: 604 TLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGG 663
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ A ++++M G VP+ +T T+I + E +++ + E
Sbjct: 664 NLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNEAELAK 723
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
L+++ ++ M+ + +LT M K+ + ++G A
Sbjct: 724 VLVEINHKEGNMEAVLNVLTDMAKDGLLPNSGKTA 758
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 119/444 (26%), Positives = 222/444 (50%), Gaps = 6/444 (1%)
Query: 93 HETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAK 152
+++ VD + I + SP+++ L CG+ ++ LV + + R +D PA+
Sbjct: 69 NQSAVDVHNIIKHHRGSSPEEIERILDKCGIQLTEELVFEVVNRNRSDWKPAYILSRLIV 128
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ Y+ + +YN ++DVLGK ++F ++V EM + +G+V T ++ R +
Sbjct: 129 KHSVYISSSLVYNEILDVLGKMRRFEEFHQVVDEMSK-RDGFVDEKTYEVLLNRYAAAHK 187
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNIL 272
D+AV F +++G+E D A L+ L + VE A +F + + NI+
Sbjct: 188 VDEAVGVFERRREFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIRTMNII 247
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
++GWC V +A++ K++ PDVVSY I ++ K + + + E G
Sbjct: 248 LNGWCVLGNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGR 307
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P V V+ AL K+I EAL+V+++M P+ Y+SL+ L K R + E
Sbjct: 308 NPDVKICNNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRTEKVWE 367
Query: 393 IFEDMKKQG--VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ E+M+ +G PN +T+ ++ + RS++ +A +L++M ++ C+ + Y + ++
Sbjct: 368 LVEEMEHKGGSCSPNDVTFGYLLKYS-QRSKDVDA--VLERMAKNKCEMTSDLYNLMFRL 424
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
+ + + + M ++ + D TY + GL GK+ A S+F+EM+SKG+VP
Sbjct: 425 YVQWDNEEKVREIWGEMERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPE 484
Query: 511 HSTYKMLEEKLEKKRLGNAKERIN 534
T +L + K R+ + R N
Sbjct: 485 PRTEMLLNQNKTKPRVEDKMLRSN 508
>gi|326525088|dbj|BAK07814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 539
Score = 171 bits (434), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 114/399 (28%), Positives = 183/399 (45%), Gaps = 5/399 (1%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
A FF P +Y M+D+L K F L L+ EM E + VS + I
Sbjct: 122 ALTFFHHVVPSLPADSLPALYAAMIDLLAKHHHFPLARHLLDEMRE-RSIPVSSQVILAI 180
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVE-KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
+RR VR G +A E FR M++YG D L+ L+ L K A +F +K
Sbjct: 181 IRRYVRAGMSPEASELFRRMEEYGAGVPDPAVLASLLGALSKKRLAGEAQALFDSYKSVF 240
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P ++ L+H WC+ +D A++ EM Q G P+V +YT I+ R + +
Sbjct: 241 PPDVVLYTTLVHAWCRAGCLDKAEQVFAEMQQAGIMPNVYTYTSVIDAMYRAGQVPRAQE 300
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L +M E GC P+ T+ +M A KA + + L+V+ +M+ C PD Y+ L+
Sbjct: 301 LLCQMMETGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHC 360
Query: 383 KAGR--VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
G+ + A ++ M +G +P+ T+N M+ E A +L ++M+E CKP+
Sbjct: 361 GKGQSNLDAAMKVLAKMIAKGCIPDCHTFNPMLKLVLGTGNVEAARRLYERMQELQCKPN 420
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+K+ ++K M ++ + M V + TY +L+ G A +
Sbjct: 421 VVTYNLLMKLFNKEKSMDMVLRIKKDMDAQGVEPNVNTYGALIESFCGRGNWRRAHATLR 480
Query: 501 EMI-SKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
EM+ K + P Y M+ L K E + +L+A
Sbjct: 481 EMVEEKSLKPTKPVYDMVLMLLRKAGQLRKHEELVELMA 519
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 181/354 (51%), Gaps = 6/354 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N ++ L ++ + + ++M++ + T + ++ L + R DAV+ +
Sbjct: 7 LHNVVIGGLCRAGRLRHALGVYRQMNDAHP--PDFLTYTKLVHGLSKARRLRDAVQVLQE 64
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M D L+V++ +L G+ V+ A ++ E + ++ ++ L+ G CK +
Sbjct: 65 MVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCER 124
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A ++ M ++G +P VV+Y I +CR + + +++M +GC P +ITYT
Sbjct: 125 LDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTA 184
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ K++ + L++ ++ PD YS++I L KAGR++DA +IFE+M
Sbjct: 185 LIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS--- 241
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P +TYN++I C + + A++LL KM +D C PD TY L+ C+ R+
Sbjct: 242 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAY 301
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
L M N +S D T+ SLV GL G++E A EE+ +G P TY
Sbjct: 302 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 355
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 182/363 (50%), Gaps = 9/363 (2%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
H P+ Y +V L K+++ ++++EM + T++ +++ L G R DDA
Sbjct: 35 HPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARH-VPDNTTLTVVVQSLCLGDRVDDA 93
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIH 274
E M G+ + S L+D L K ++ A + + + C P + +N +I
Sbjct: 94 RELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAP-TVVTYNSIIT 152
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C+ R+VD+A M++M +G PD+++YT I +C+ +D + + L E+ +G P
Sbjct: 153 GFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTP 212
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
++TY+ V+ L KA ++ +A+ ++E+M C P Y+SLI +AG + +A +
Sbjct: 213 DIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLL 269
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
M P+V+TY T++S+ C ++A +L Q+M + PD T+ L+ C +
Sbjct: 270 GKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGE 329
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
RM+ LL + + TY +V G ++ ++ A + S+G VP TY
Sbjct: 330 GRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTY 389
Query: 515 KML 517
+L
Sbjct: 390 NIL 392
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 167/339 (49%), Gaps = 8/339 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ L R GR A+ +R M D + L+ L K + A +V E
Sbjct: 9 NVVIGGLCRAGRLRHALGVYRQMND-AHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVS 67
Query: 261 C--IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
+P + +++ C +VDDA++ ++EM +G + + ++Y+ ++ C+ +
Sbjct: 68 ARHVP-DNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 126
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ ++ M E+GC P+V+TY ++ +A++++EA E+M ++ C PD Y++LI
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALI 186
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
K+ V E+ ++ ++G P+++TY+T+I C +A+ + ++M C
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CA 243
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P TY L+ CR M LL M + + D TY +L+ + G+L+ A
Sbjct: 244 PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYEL 303
Query: 499 FEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
F++M++ + P T+ L + L + R+ +A E + ++
Sbjct: 304 FQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 342
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 116/504 (23%), Positives = 209/504 (41%), Gaps = 69/504 (13%)
Query: 47 SLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSK 106
+L + + D+ PD + G ++ RL + ++ ++S H D ++ ++ +
Sbjct: 24 ALGVYRQMNDAHPPDFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLT-VVVQ 82
Query: 107 QYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNT 166
D+V +A LVE+ L R G A T Y+
Sbjct: 83 SLCLGDRVDDA---------RELVEEMLHR---------GMAANAIT----------YSA 114
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA---------- 216
+VD L K ++ LV+ M E ++ T ++I+ R R D+A
Sbjct: 115 LVDGLCKCERLDEAVALVETMAE-RGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAE 173
Query: 217 ------------VEAF-------RGMK------KYGVEKDTRALSVLMDTLVKGNSVEHA 251
+ F RG++ + G D S ++D L K + A
Sbjct: 174 GCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDA 233
Query: 252 YKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
+F E C P ++ +N LI G+C+ +D+A + + +M +PDVV+YT + +
Sbjct: 234 VDIFEEMS-CAP-TAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAF 291
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C+ + ++M P V+T+T ++ L ++ +AL++ E++ C P
Sbjct: 292 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 351
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y+ ++ KA +V+ A E+ D + +G VPN +TYN +++ C + AL+ L +
Sbjct: 352 YTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 411
Query: 432 M--EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ E C YA +L CR R M + A T+A++V L ++
Sbjct: 412 LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKA 471
Query: 490 GKLELACSFFEEMISKGIVPYHST 513
+ + A EEMI G P T
Sbjct: 472 HQPQQAHELLEEMIKYGHTPGPGT 495
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 116/225 (51%), Gaps = 5/225 (2%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T +T+M + GR DDA E F+ M + D + L+D L +E A ++
Sbjct: 281 VVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 340
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E + C P + +N ++ G+CK +V A++ + + +GF P+ V+Y + CR
Sbjct: 341 EITRRGCPP-TIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRA 399
Query: 315 KDFRKVDDTLKEMQEKG--CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ L ++ +G C SV Y I++ AL + + ++A++ YE+M +P +
Sbjct: 400 GRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAA 459
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+++++F L KA + + A+E+ E+M K G P T + ++S+ C
Sbjct: 460 TFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYC 504
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 95/238 (39%), Gaps = 39/238 (16%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ K + +EL ++M N + T ++++ L GR +DA+E +
Sbjct: 284 YTTLMSAFCKMGRLDDAYELFQQM-VANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 342
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-----------------C----- 261
+ G + ++D K N V A ++ +F+ C
Sbjct: 343 TRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 402
Query: 262 ----------------IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
P S ++ I++ C+ + DDA + +EM Q+G+ P ++
Sbjct: 403 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 462
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
+ C+ ++ + L+EM + G P T V+ A +A I +A ++ +++
Sbjct: 463 TVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520
>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
Length = 802
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 114/381 (29%), Positives = 189/381 (49%), Gaps = 16/381 (4%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
R +D A FF WA Q Y H P +Y +M++VL K+ K C V + + Y
Sbjct: 182 RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKT-KLCQGSRRVLVLMKRRGIYR 240
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ S +M R G+ DA++ M++ GVE + + +D V+ N +E A + F
Sbjct: 241 TPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALR-F 299
Query: 256 LEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
LE + + + +N +I G+C +V++A + +++M +G PD VSY + + C+
Sbjct: 300 LERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCK 359
Query: 314 EKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
EK +V D +K+M +E G P +TY ++H L K +EAL + + D
Sbjct: 360 EKRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKL 419
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
YS+++ L K GR+ +A ++ +M P+V+TY +++ C E + A KLLQ M
Sbjct: 420 GYSAIVHALCKEGRMSEAKDLINEMD---CPPDVVTYTAVVNGFCRLGEVDKAKKLLQVM 476
Query: 433 EEDLCKPDCETYAPLLKMCCRKKR----MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
KP+ +Y LL CR + +++N H + S ++ TY+ ++ GL
Sbjct: 477 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWW----SPNSITYSVIMHGLRR 532
Query: 489 SGKLELACSFFEEMISKGIVP 509
GKL AC EM+ KG P
Sbjct: 533 EGKLSEACDVVREMVLKGFFP 553
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 172/352 (48%), Gaps = 17/352 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ +V L K + +L+ EMD + + T + ++ R G D A + + M
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEMDCPPD----VVTYTAVVNGFCRLGEVDKAKKLLQVM 476
Query: 224 KKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
+G + +T + + L++ + + G S+E + + + +S +++++HG + K+
Sbjct: 477 HTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKL 536
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A ++EM +GF P V ++ CR+ + ++E KGC +V+ +T V
Sbjct: 537 SEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTV 596
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+H + +++ AL V + M + D Y++L+ L K GR+ +A E+ + M +G+
Sbjct: 597 IHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGI 656
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET-YAPLLKMCCRKKRMKVLN 461
P +TY T+I C + ++ + +L+KM + + C T Y +++ C +++ +
Sbjct: 657 DPTPVTYRTVIHRYCQMGKVDDLVAILEKM---ISRQKCRTIYNQVIEKLCVLGKLEEAD 713
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESG----KLELACSFFEEMISKGIVP 509
LL + + DA T +L+ G ++ G ++AC F ++ ++P
Sbjct: 714 TLLGKVLRTASRSDAKTCYALMEGYLKKGVPLSAYKVACRMF----NRNLIP 761
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 122/254 (48%), Gaps = 4/254 (1%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ + F+ ++ + + ++ DA K + M + G P+++ I+ + R K L
Sbjct: 241 TPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFL 300
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+ MQ G P+V+TY ++ ++ EA+++ E M S CLPD Y +++ L K
Sbjct: 301 ERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKE 360
Query: 385 GRVKDANEIFEDM-KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
R+ + ++ + M K+ G+VP+ +TYNT+I + AL L+ +E + D
Sbjct: 361 KRIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLG 420
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y+ ++ C++ RM L+ M D D TY ++V G G+++ A + M
Sbjct: 421 YSAIVHALCKEGRMSEAKDLINEM---DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMH 477
Query: 504 SKGIVPYHSTYKML 517
+ G P +Y L
Sbjct: 478 THGHKPNTVSYTAL 491
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 125/263 (47%), Gaps = 6/263 (2%)
Query: 280 RKVDDAQKAMKEMF----QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
R DD + A+K + Q + D + Y +E + K + L M+ +G +
Sbjct: 182 RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRT 241
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
++ VM + +A Q+ +ALKV M+ P+ ++ I + +A R++ A E
Sbjct: 242 PEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLE 301
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M+ G+VPNV+TYN MI C E A++LL+ M C PD +Y ++ C++K
Sbjct: 302 RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEK 361
Query: 456 RMKVLNFLLTHMFK-NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
R+ + L+ M K + + D TY +L+ L + + A F ++ KG Y
Sbjct: 362 RIVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGY 421
Query: 515 KMLEEKLEKK-RLGNAKERINKL 536
+ L K+ R+ AK+ IN++
Sbjct: 422 SAIVHALCKEGRMSEAKDLINEM 444
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 101/252 (40%), Gaps = 14/252 (5%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE-LNNG-YVSLATMSTIMRRLVRGGRY 213
G+ P N ++ L + + E K M+E LN G +++ +T++ +
Sbjct: 550 GFFPGPVEINLLLQSLCRDGR---THEARKFMEECLNKGCAINVVNFTTVIHGFCQNDEL 606
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY----KVFLEFKDCIPLSSQIF 269
D A+ M D + L+DTL K + A K+ + D P++ +
Sbjct: 607 DAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVT---Y 663
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+IH +C+ KVDD +++M + + Y IE C + D L ++
Sbjct: 664 RTVIHRYCQMGKVDDLVAILEKMISRQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLR 721
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+ T +M K A KV +M + + +PD L L G+V +
Sbjct: 722 TASRSDAKTCYALMEGYLKKGVPLSAYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDE 781
Query: 390 ANEIFEDMKKQG 401
A+++ + ++G
Sbjct: 782 ADKLMLRLVERG 793
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 186/396 (46%), Gaps = 7/396 (1%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT----GYMHTPEMYNTMVDVLG 172
AL +S +LV L RF + P+ FF WA G+ HT Y MV +LG
Sbjct: 173 ALTALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVHILG 232
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT 232
K+++F M L++EM + G + + ++ G +AV F M+ +G +
Sbjct: 233 KARQFQSMVALIQEMGK--EGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGV 290
Query: 233 RALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
+ + L+ L + A +VF +D + + L+ WC R + +A + EM
Sbjct: 291 ESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEM 350
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQI 352
+ G PDVV + IE R + + + M+ KG P+V TYT+++ K ++
Sbjct: 351 LENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKM 410
Query: 353 NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
+ A++ +E+M+ C PD + Y+ L+ A R+ + E+M ++G P+ TYN +
Sbjct: 411 DMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNAL 470
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN-FLLTHMFKND 471
I R+ ++A ++ +KM + +P TY ++K R ++ + M +
Sbjct: 471 IKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKG 530
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ D +Y + G I G+ E AC + EEMI KG+
Sbjct: 531 ICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGM 566
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
L F I I + ++ +A + M GF V S+ C + +E R+ +
Sbjct: 253 LCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQV 312
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
M+++ P + +YT +M A A+ + EA +V+ +M + PD ++++I L +
Sbjct: 313 FDRMRDR-YAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLR 371
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
R +A ++FE MK +G PNV TY +I C R + + A++ ++M++ C+PD T
Sbjct: 372 GQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVAT 431
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y LL KRM + LL M + D TY +L++ L + A +++MI
Sbjct: 432 YTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMI 491
Query: 504 SKGIVPYHSTYKML 517
KG+ P TY M+
Sbjct: 492 KKGLEPTIHTYNMM 505
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 120/264 (45%), Gaps = 2/264 (0%)
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++H K R+ ++EM ++G + + ++ I+ + + + + M+ G
Sbjct: 227 MVHILGKARQFQSMVALIQEMGKEG-ALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHG 285
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
V ++ ++ AL + EA +V+++M+ D PD Y++L+ A + +A
Sbjct: 286 FDDGVESFNCLLVALAQEGLGREANQVFDRMR-DRYAPDLRSYTALMLAWCNARNLVEAG 344
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++ +M + G+ P+V+ +NTMI A+K+ + M+ P+ TY L++
Sbjct: 345 RVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDH 404
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++ +M + M D TY L+ G + +++ + EEM KG P
Sbjct: 405 CKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDG 464
Query: 512 STYKMLEEKLEKKRLGNAKERINK 535
TY L + L + + + RI K
Sbjct: 465 RTYNALIKLLTNRNMPDDAARIYK 488
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 158/383 (41%), Gaps = 59/383 (15%)
Query: 99 KISKILSK--QYQSPDKVVEALKGCGVSVSNSLVEQTLRRFS--NDLTPAFGFFTWAKTQ 154
K+ IL K Q+QS +++ + G ++ + ++ F+ ++ A G F +T
Sbjct: 226 KMVHILGKARQFQSMVALIQEMGKEGALCMDAF-KIAIKSFAAAGEIKNAVGVFEMMRTH 284
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIM------RRL 207
G+ E +N ++ L + L E + D + + Y L + + +M R L
Sbjct: 285 -GFDDGVESFNCLLVALAQEG---LGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNL 340
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS- 266
V GR + M + G++ D + +++ L++G A K+F K P +
Sbjct: 341 VEAGR------VWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNV 394
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+ +LI CK K+D A + +EM G PDV +YTC + Y K +V L+E
Sbjct: 395 WTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEE 454
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVY--------------------------- 359
M +KGC P TY ++ L ++A ++Y
Sbjct: 455 MTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGR 514
Query: 360 ---------EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
E+M PD + Y+ I + GR ++A + E+M ++G+ + YN
Sbjct: 515 NYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYN 574
Query: 411 TMISSACARSEEENALKLLQKME 433
+ + + +L QK++
Sbjct: 575 KFAADFSKAGKPDILYELAQKVK 597
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/341 (30%), Positives = 175/341 (51%), Gaps = 4/341 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + ++ R + ++A++ M++ G + +VL+D L K + V A V
Sbjct: 56 NVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVV 115
Query: 256 LE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ + + FN L+ G+CK VDDA+K + M +G P+VV+Y+ I+ C+
Sbjct: 116 KKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKS 175
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ F + + L+EM+ G P TY+ ++H L KA +I EA ++ +M C PD Y
Sbjct: 176 QKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
SS+I K+G++ +A + ++M+KQ P+V+TYNT+I C + A +L +M+E
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE 295
Query: 435 --DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
D+ PD TY+ ++ C+ + LL M K + D TY +++ GL + G+L
Sbjct: 296 SGDVL-PDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRL 354
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
E A + M G P TY L L K R + ER+
Sbjct: 355 EEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERV 395
Score = 162 bits (409), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 167/312 (53%), Gaps = 6/312 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T S ++ L + ++ +A E MK GV D S L+ L K + +E A ++
Sbjct: 161 NVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQML 220
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ C P +++ +IH +CK+ K+ +AQK ++EM +Q SPDVV+Y I+ C+
Sbjct: 221 RRMAGSGCTP-DVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 279
Query: 314 EKDFRKVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ L +MQE G P V+TY+ V++ L K+ + EA K+ ++M C PD
Sbjct: 280 LGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVV 339
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+++I L K GR+++A + + MK+ G PNV+TY T+IS C + + A +++++M
Sbjct: 340 TYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 399
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM--FKNDVSMDAGTYASLVRGLIESG 490
C P+ TY ++ C R+K L+ M + + S DA TY ++V L+ S
Sbjct: 400 RNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSD 459
Query: 491 KLELACSFFEEM 502
++ A E+M
Sbjct: 460 LVQEAEQLLEQM 471
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 102/342 (29%), Positives = 173/342 (50%), Gaps = 5/342 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN +VD L K ++VK+M E G+ ++ T ++++ + G DDA +
Sbjct: 95 YNVLVDALCKLSMVGAAQDVVKKMIE--GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGI 152
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRK 281
M G+ + S L+D L K A +V E K + + ++ LIHG CK K
Sbjct: 153 MVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADK 212
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+++A++ ++ M G +PDVV Y+ I +C+ + TL+EM+++ P V+TY
Sbjct: 213 IEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNT 272
Query: 342 VMHALGKAKQINEALKVYEKMK-SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
V+ L K +I EA + ++M+ S D LPD YS++I L K+ + +A ++ + M K
Sbjct: 273 VIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKA 332
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+V+TY T+I C E A LLQ M+ C P+ TY L+ C+ +++
Sbjct: 333 GCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEA 392
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
++ M + TY ++V GL SG+++ A + M
Sbjct: 393 ERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRM 434
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 99/337 (29%), Positives = 161/337 (47%), Gaps = 10/337 (2%)
Query: 113 KVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLG 172
K++E V NSLV+ +R + D AK G Y+ ++D L
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAK---GMRPNVVTYSALIDGLC 173
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
KS+KF E+++EM +G A T S ++ L + + ++A + R M G D
Sbjct: 174 KSQKFLEAKEVLEEMKA--SGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPD 231
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMK 290
S ++ K + A K E + + +N +I G CK K+ +AQ +
Sbjct: 232 VVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILD 291
Query: 291 EMFQQG-FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
+M + G PDVV+Y+ I C+ + L M + GC P V+TYT ++ L K
Sbjct: 292 QMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKC 351
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
++ EA + + MK C P+ Y++LI L KA +V +A + E+M+ G PN++TY
Sbjct: 352 GRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTY 411
Query: 410 NTMISSACARSEEENALKLLQKMEEDL--CKPDCETY 444
NTM++ C + A +L+Q+M++ C PD TY
Sbjct: 412 NTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATY 448
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 122/238 (51%), Gaps = 3/238 (1%)
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
C + A + ++EM GF+PD ++T I D D L+ M GC P+V
Sbjct: 1 CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNV 57
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+TYT ++ A +AK++ EA+K+ E+M+ C P+ Y+ L+ L K V A ++ +
Sbjct: 58 VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M + G PNV+T+N+++ C R ++A KLL M +P+ TY+ L+ C+ ++
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+L M + V+ DA TY++L+ GL ++ K+E A M G P Y
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 121/240 (50%)
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
D AM + G P+VV+YT I + R K + L+EM+E+GC P+++TY +++
Sbjct: 40 DLDGAMDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLV 99
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
AL K + A V +KM P+ ++SL+ K G V DA ++ M +G+
Sbjct: 100 DALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMR 159
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
PNV+TY+ +I C + A ++L++M+ PD TY+ L+ C+ +++ +
Sbjct: 160 PNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQM 219
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
L M + + D Y+S++ +SGKL A +EM + P TY + + L K
Sbjct: 220 LRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCK 279
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 99/199 (49%), Gaps = 4/199 (2%)
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
A ++ AL++ E+MKS PD ++ +I ++ AG D + + ++ G PNV+T
Sbjct: 3 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAG---DLDGAMDHLRSMGCDPNVVT 59
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y +I++ + E A+KLL++M E C P+ TY L+ C+ + ++ M
Sbjct: 60 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMI 119
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLG 527
+ + + T+ SLV G + G ++ A M++KG+ P TY L + L K ++
Sbjct: 120 EGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFL 179
Query: 528 NAKERINKLLAHAKEQKTF 546
AKE + ++ A F
Sbjct: 180 EAKEVLEEMKASGVTPDAF 198
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/335 (31%), Positives = 176/335 (52%), Gaps = 5/335 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N+++D L K ++ + K E ++ T ST++ L + + D+A++ M
Sbjct: 211 FNSVLDGLCKEQRILDAHNVFKRALE-RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKM 269
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
+ G +T S ++D L+K +E A V + +D C+P + +N LI G+ K ++
Sbjct: 270 VELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP-DAVTYNTLIDGFFKRQR 328
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A ++EM + GF P VV+YT CR F + + L M +GC P+ ITY+
Sbjct: 329 LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 388
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCL-PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L KA ++ EAL +EKM D+ + P YS+LI L KAG++ +A E E M +
Sbjct: 389 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRA 448
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G +P+V+T++ +I+ C + L+L + M E C PD TYA L+ CR R+
Sbjct: 449 GRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEA 508
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
L M + +S D T +++ GL+E + E A
Sbjct: 509 FDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 111/404 (27%), Positives = 200/404 (49%), Gaps = 8/404 (1%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMST 202
A+ F A+ + G T YNTM+D L K + L +M ++ G+ ++ T ST
Sbjct: 49 AYDLFEEARAK-GCHPTVVTYNTMIDGLCKCGRIENALTLYDDM-AIHFGFRPTVVTYST 106
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DC 261
++ L R D + M G + + L++ L+ + A+ + + +
Sbjct: 107 LIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANG 166
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF--QQGFSPDVVSYTCFIEHYCREKDFRK 319
P F ++I G CK +++ A + + EMF + G SPDV+++ ++ C+E+
Sbjct: 167 CPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILD 226
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ K E+GC+P+V+TY+ ++ L K +++EAL++ KM C +T YS+++
Sbjct: 227 AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVD 286
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L K GR++DA + M+ G +P+ +TYNT+I R A+ LL++M E P
Sbjct: 287 GLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHP 346
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
TY L CR R +L +M + +A TY+S+V GL ++G++ A +F
Sbjct: 347 SVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYF 406
Query: 500 EEMISKGIV-PYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAK 541
E+M +V P+ Y L + L K ++ A E + +++ +
Sbjct: 407 EKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGR 450
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 189/376 (50%), Gaps = 6/376 (1%)
Query: 161 PEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAV 217
PE+ + ++ L K + + +V EM + +G + T ++++ L + R DA
Sbjct: 169 PELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAH 228
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGW 276
F+ + G + S L+D L K ++ A ++ + + ++ + ++ ++ G
Sbjct: 229 NVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGL 288
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
K +++DA +++M G PD V+Y I+ + + + R+ L+EM E G PSV
Sbjct: 289 LKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSV 348
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+TYT + H L ++ + +EA+++ + M + C P+ YSS++ L KAGRV +A FE
Sbjct: 349 VTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEK 408
Query: 397 MKKQGVV-PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M + VV P+V+ Y+ +I C + + A + L++M PD T++ L+ C
Sbjct: 409 MARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAG 468
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
R+ L M + D TYA+LV L + +++ A F++M S G+ P ST +
Sbjct: 469 RIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRR 528
Query: 516 -MLEEKLEKKRLGNAK 530
M+ LE R +AK
Sbjct: 529 TMIHGLLEVNRDEDAK 544
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/337 (27%), Positives = 169/337 (50%), Gaps = 7/337 (2%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPL 264
L + + D A+ F+ M + D L+D L K V+ AY +F E K C P
Sbjct: 5 LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHP- 63
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEM-FQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ +N +I G CK ++++A +M GF P VV+Y+ I+ CR+ + K
Sbjct: 64 TVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKL 123
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
L+EM +GC P+ +TY +++AL + EA + E+M ++ C P+ + +I L K
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCK 183
Query: 384 AGRVKDANEIFED--MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
G ++ A + ++ M + G+ P+V+T+N+++ C +A + ++ E C+P+
Sbjct: 184 EGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNV 243
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY+ L+ + +M LL M + + TY+++V GL++ G++E A +
Sbjct: 244 VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 303
Query: 502 MISKGIVPYHSTYKMLEEK-LEKKRLGNAKERINKLL 537
M G +P TY L + +++RL A + ++L
Sbjct: 304 MRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREML 340
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 135/255 (52%), Gaps = 3/255 (1%)
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+I G CK+RKVD A K+M + PDVV+Y I+ +++ ++ D +E + KG
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL-PDTSFYSSLIFILSKAGRVKDA 390
C P+V+TY ++ L K +I AL +Y+ M P YS+LI L + V
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
++ E+M +G PN +TYNT++++ + + A LL++M + C P+ T+ ++K
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 451 CCRKKRMKVLNFLLTHMF--KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C++ ++ ++ MF ++ +S D T+ S++ GL + ++ A + F+ + +G
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 509 PYHSTYKMLEEKLEK 523
P TY L + L K
Sbjct: 241 PNVVTYSTLIDGLSK 255
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 163/351 (46%), Gaps = 25/351 (7%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSEN-------HETDVDKISKI--LSKQYQ 109
SPD L G + R+ + + R L + T +D +SK+ + + Q
Sbjct: 205 SPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQ 264
Query: 110 SPDKVVEALKGCGV-SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMV 168
K+VE GC +V+ S V L + + A + G + YNT++
Sbjct: 265 LLAKMVEL--GCRANTVTYSTVVDGLLKVGR-MEDAVVVLRQMR-DAGCLPDAVTYNTLI 320
Query: 169 DVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG 227
D K ++ L++EM L G+ S+ T +T+ L R GR+D+AVE M G
Sbjct: 321 DGFFKRQRLREAVGLLREM--LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 378
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDA 285
+ S ++D L K V A F + + + ++ LI G CK K+D+A
Sbjct: 379 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEA 438
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSVITYTIV 342
+ ++ M + G PDVV+++ I C D ++D L + M E+GC P ++TY +
Sbjct: 439 YEFLERMIRAGRIPDVVTFSILINGLC---DAGRIDTGLELFRGMAERGCVPDMVTYATL 495
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+ L +A +++EA ++++M+SD PD S ++I L + R +DA I
Sbjct: 496 VDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRI 546
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 143/302 (47%), Gaps = 38/302 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+T++D L K K +L+ +M EL + T ST++ L++ GR +DAV R M
Sbjct: 246 YSTLIDGLSKMAKMDEALQLLAKMVELGC-RANTVTYSTVVDGLLKVGRMEDAVVVLRQM 304
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
+ G D + L+D K + A + E + S + + L HG C++ +
Sbjct: 305 RDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRF 364
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR-----------EKDFR------------- 318
D+A + + M +G +P+ ++Y+ ++ C+ EK R
Sbjct: 365 DEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSA 424
Query: 319 ---------KVDDT---LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
K+D+ L+ M G P V+T++I+++ L A +I+ L+++ M
Sbjct: 425 LIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERG 484
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C+PD Y++L+ L +A RV +A ++F+ M+ G+ P+ T TMI + +E+A
Sbjct: 485 CVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAK 544
Query: 427 KL 428
++
Sbjct: 545 RI 546
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 106/396 (26%), Positives = 186/396 (46%), Gaps = 7/396 (1%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT----GYMHTPEMYNTMVDVLG 172
AL +S +LV L RF + P+ FF WA G+ HT Y MV +LG
Sbjct: 173 ALTALSPPLSETLVLAVLDRFKHAHRPSHRFFRWAAAAAAASGGFAHTTITYCKMVHILG 232
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT 232
K+++F M L++EM + G + + ++ G +AV F M+ +G +
Sbjct: 233 KARQFQSMVALIQEMGK--EGALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGV 290
Query: 233 RALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
+ + L+ L + A +VF +D + + L+ WC R + +A + EM
Sbjct: 291 ESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWNEM 350
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQI 352
+ G PDVV + IE R + + + M+ KG P+V TYT+++ K ++
Sbjct: 351 LENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKM 410
Query: 353 NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
+ A++ +E+M+ C PD + Y+ L+ A R+ + E+M ++G P+ TYN +
Sbjct: 411 DMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNAL 470
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN-FLLTHMFKND 471
I R+ ++A ++ +KM + +P TY ++K R ++ + M +
Sbjct: 471 IKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHRKG 530
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ D +Y + G I G+ E AC + EEMI KG+
Sbjct: 531 ICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGM 566
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 124/254 (48%), Gaps = 1/254 (0%)
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
L F I I + ++ +A + M GF V S+ C + +E R+ +
Sbjct: 253 LCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQV 312
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
M+++ P + +YT +M A A+ + EA +V+ +M + PD ++++I L +
Sbjct: 313 FDRMRDR-YAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLR 371
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
R +A ++FE MK +G PNV TY +I C R + + A++ ++M++ C+PD T
Sbjct: 372 GQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVAT 431
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y LL KRM + LL M + D TY +L++ L + A +++MI
Sbjct: 432 YTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMI 491
Query: 504 SKGIVPYHSTYKML 517
KG+ P TY M+
Sbjct: 492 KKGLEPTIHTYNMM 505
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 120/264 (45%), Gaps = 2/264 (0%)
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++H K R+ ++EM ++G + + ++ I+ + + + + M+ G
Sbjct: 227 MVHILGKARQFQSMVALIQEMGKEG-ALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHG 285
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
V ++ ++ AL + EA +V+++M+ D PD Y++L+ A + +A
Sbjct: 286 FDDGVESFNCLLVALAQEGLGREANQVFDRMR-DRYAPDLRSYTALMLAWCNARNLVEAG 344
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++ +M + G+ P+V+ +NTMI A+K+ + M+ P+ TY L++
Sbjct: 345 RVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDH 404
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++ +M + M D TY L+ G + +++ + EEM KG P
Sbjct: 405 CKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDG 464
Query: 512 STYKMLEEKLEKKRLGNAKERINK 535
TY L + L + + + RI K
Sbjct: 465 RTYNALIKLLTNRNMPDDAARIYK 488
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 149/360 (41%), Gaps = 59/360 (16%)
Query: 99 KISKILSK--QYQSPDKVVEALKGCGVSVSNSLVEQTLRRFS--NDLTPAFGFFTWAKTQ 154
K+ IL K Q+QS +++ + G ++ + ++ F+ ++ A G F +T
Sbjct: 226 KMVHILGKARQFQSMVALIQEMGKEGALCMDAF-KIAIKSFAAAGEIKNAVGVFEMMRTH 284
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIM------RRL 207
G+ E +N ++ L + L E + D + + Y L + + +M R L
Sbjct: 285 -GFDDGVESFNCLLVALAQEG---LGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNL 340
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS- 266
V GR + M + G++ D + +++ L++G A K+F K P +
Sbjct: 341 VEAGR------VWNEMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNV 394
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+ +LI CK K+D A + +EM G PDV +YTC + Y K +V L+E
Sbjct: 395 WTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEE 454
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVY--------------------------- 359
M +KGC P TY ++ L ++A ++Y
Sbjct: 455 MTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGR 514
Query: 360 ---------EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
E+M PD + Y+ I + GR ++A + E+M ++G+ + YN
Sbjct: 515 NYMMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYN 574
>gi|296081511|emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 181/354 (51%), Gaps = 2/354 (0%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
+V ++ +++ + + + L C V +S++LV L RF + PAF FF WA +
Sbjct: 159 EVSRVCRVIDELFALDRNMEAVLDECNVDLSHALVVGVLERFKHARKPAFRFFCWAGQKA 218
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ H YN M+ VLG++++F M ++ EM E G +++ T S ++
Sbjct: 219 GFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGE--KGLLTMETFSIAIKAFAAAKERKK 276
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
AV F MK+Y + ++ L+D L + + A +F + +D + + + +L++G
Sbjct: 277 AVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNG 336
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
WC+ + + +A + EM +GF PD++++ +E + K + M+ KG P+
Sbjct: 337 WCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPN 396
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V TYTI++ L K ++ EA++ +++M C PD + Y+ LI ++ + +
Sbjct: 397 VRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLK 456
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
+MK++G + TYN +I R ++A+++ +KM ++ + TY ++K
Sbjct: 457 EMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMK 510
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/294 (23%), Positives = 138/294 (46%), Gaps = 1/294 (0%)
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
+K G ++R + +M L + E + E + L+ + F+I I + ++
Sbjct: 216 QKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLLTMETFSIAIKAFAAAKERK 275
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A + M + F V + C +++ R K ++ ++++++ P++ TYT+++
Sbjct: 276 KAVGVFELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDR-FTPNLRTYTVLL 334
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ + K + EA + + +M PD + +++ L K + DA ++FE MK +G
Sbjct: 335 NGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPS 394
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
PNV TY +I C + + + A++ +M + C+PD Y L+ +K+M + L
Sbjct: 395 PNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYAL 454
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M + D TY +L++ + + A +++MI GI TY M+
Sbjct: 455 LKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMM 508
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 129/282 (45%), Gaps = 2/282 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+S+ +N ++ +TR+ + + EM ++G + +++ I+ + K+ +K
Sbjct: 223 NSRTYNAMMSVLGRTRQFESMMGMLGEMGEKGLL-TMETFSIAIKAFAAAKERKKAVGVF 281
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+ M+ V T ++ LG+AK EA ++EK++ D P+ Y+ L+ +
Sbjct: 282 ELMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLE-DRFTPNLRTYTVLLNGWCRI 340
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
+ +A + +M +G P+++ ++TM+ ++ +A+KL + M+ P+ TY
Sbjct: 341 KNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTY 400
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L++ C++ +M+ M + DA Y L+ G K++ + +EM
Sbjct: 401 TILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKE 460
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
KG TY L + + +++ + RI K + Q T
Sbjct: 461 KGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTL 502
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 101/234 (43%), Gaps = 7/234 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
++TM++ L K KK +L + M + ++ T + ++R L + + +AVE F M
Sbjct: 365 HHTMLEGLLKCKKKSDAIKLFEVM-KAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEM 423
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKV 282
G + D + L+ ++ Y + E K+ P + +N LI +
Sbjct: 424 VDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMP 483
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
DDA + K+M Q G + +Y ++ Y +++ + EM EKG K + Y
Sbjct: 484 DDAVRIYKKMIQNGIQSTLHTYNMMMKSYFYTRNY---EMGCAEMIEKGMKAPQLDYNKF 540
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+A + + ++ KMK + ++ ++ ++ K RVK + + D
Sbjct: 541 AADFSRAGKPDILEELARKMKFEGKFEVSNVFARWAEMMKK--RVKRRDPVKSD 592
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 104/340 (30%), Positives = 169/340 (49%), Gaps = 3/340 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+T+++ L K + EL+++M T I+ RL + R DDA+ M
Sbjct: 83 YSTIINWLCKLNRVEEARELIEKMARY--APPDALTYGPIVERLCKTKRIDDALATVEEM 140
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
G++ D + ++ L + VE A +F + K I + +N LI+G CK ++
Sbjct: 141 ATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRI 200
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ A + KEM +G+ P VSY I+ +C++KD D +M C P+V+TYT +
Sbjct: 201 ETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTL 260
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L K+ ++ A +V + M P+ + YS LI K RV +A+++ E M QG+
Sbjct: 261 IDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGI 320
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P V+TYN +++S C + E+A KL + M + C P TY LL+ C K++ +
Sbjct: 321 APTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHR 380
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
L M DA TY +L GL +GK+ A E+M
Sbjct: 381 LYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 181/386 (46%), Gaps = 4/386 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ GY Y ++ L K F ++L+ M L STI+ L + R
Sbjct: 37 VEAGYTLRASGYGILISCLCKVGNFDEAYKLLHTM-RLKRFKRKAIAYSTIINWLCKLNR 95
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNI 271
++A E M +Y D +++ L K ++ A E I + I+N
Sbjct: 96 VEEARELIEKMARYA-PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNF 154
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++ G C+ KV++A+ ++M +Q +P+VV+Y I C+ + KEM KG
Sbjct: 155 VLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKG 214
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P+ ++Y ++ K K + A V++KM +C+P+ Y++LI LSK+G+V+ A
Sbjct: 215 YVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAA 274
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
E+ + M K+GV PNV TY+ +I C + A KLL++M P TY LL
Sbjct: 275 EVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSL 334
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
CR +++ L M + TY +L+R L +L+ A + EMI+KG P
Sbjct: 335 CRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDA 394
Query: 512 STYKMLEEKLEKK-RLGNAKERINKL 536
TY L L + ++ A+E + K+
Sbjct: 395 ITYDTLAWGLTRAGKVHEAQELMEKM 420
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 87/325 (26%), Positives = 163/325 (50%), Gaps = 2/325 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
AT +T+ + GR + E ++GM + G +L+ L K + + AYK+
Sbjct: 11 ATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKLLHT 70
Query: 258 FK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ + ++ +I+ CK +V++A++ +++M + PD ++Y +E C+ K
Sbjct: 71 MRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYA-PPDALTYGPIVERLCKTKR 129
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
T++EM +G KP Y V+ L + +++ EA ++EKM P+ Y++
Sbjct: 130 IDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNT 189
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI L KA R++ A E+F++M +G VP ++YNT+I C + + A + KM
Sbjct: 190 LINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSN 249
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C P+ TY L+ + +++ +L M K V+ + TY+ L+ G + +++ A
Sbjct: 250 CVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAH 309
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKL 521
E+M+++GI P TY +L L
Sbjct: 310 KLLEQMVTQGIAPTVVTYNILLNSL 334
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 123/237 (51%), Gaps = 4/237 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT+++ L K+ + +EL KEM GYV + + +T++ + A + F
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMA--GKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 244
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M + + + L+D L K V+ A +V K + + ++ LI G+CK R+
Sbjct: 245 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRR 304
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD+A K +++M QG +P VV+Y + CR + M ++ C P+V+TY
Sbjct: 305 VDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNT 364
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
++ AL KQ++ A ++Y +M + C PD Y +L + L++AG+V +A E+ E MK
Sbjct: 365 LLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 126/240 (52%), Gaps = 3/240 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T +T++ L + R + A E F+ M G + + L+D K + A VF
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 242
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ +C+P + + LI G K+ KV A + + M ++G +P+V +Y+C I+ +C+
Sbjct: 243 DKMVRSNCVP-NVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 301
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + L++M +G P+V+TY I++++L +A ++ +A K++ M C P
Sbjct: 302 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 361
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++L+ L ++ A+ ++ +M +G P+ +TY+T+ + A +L++KM+
Sbjct: 362 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 138/304 (45%), Gaps = 35/304 (11%)
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ + IP + FN + G+ K +++ ++ + M + G++ Y I C+
Sbjct: 1 MALRRVIP-GAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVG 59
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM------------- 362
+F + L M+ K K I Y+ +++ L K ++ EA ++ EKM
Sbjct: 60 NFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGP 119
Query: 363 ---------KSDDCL------------PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+ DD L PD Y+ ++ L + +V++A +FE M KQ
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PNV+TYNT+I+ C E A +L ++M P +Y L+ C+KK +
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ M +++ + TY +L+ GL +SGK++ A + M+ KG+ P +TY L +
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299
Query: 522 EKKR 525
K R
Sbjct: 300 CKVR 303
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P T+ V KA ++ + +VY+ M S Y LI L K G +A ++
Sbjct: 8 PGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYKL 67
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
M+ + + Y+T+I+ C + E A +L++KM PD TY P+++ C+
Sbjct: 68 LHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMAR-YAPPDALTYGPIVERLCK 126
Query: 454 KKRMK-------------------VLNFLLT----------------HMFKNDVSMDAGT 478
KR+ + NF+L+ M K ++ + T
Sbjct: 127 TKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVT 186
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLL 537
Y +L+ GL ++ ++E A F+EM KG VP +Y L + +KK L AK+ +K++
Sbjct: 187 YNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMV 246
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
+P + ++++ +KAGR++ E+++ M + G Y +IS C + A K
Sbjct: 7 IPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFDEAYK 66
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
LL M K Y+ ++ C+ R++ L+ M + DA TY +V L
Sbjct: 67 LLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARY-APPDALTYGPIVERLC 125
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKML------EEKLEKKRL---GNAKERIN 534
++ +++ A + EEM ++GI P Y + EEK+E+ RL K+RIN
Sbjct: 126 KTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN 181
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 106/352 (30%), Positives = 176/352 (50%), Gaps = 2/352 (0%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
N MV K+ +F ++ EM E + + T + ++ R G D A+ M
Sbjct: 161 NIMVHSYCKTLEFDGADTVISEM-EKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMA 219
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVD 283
G++ + ++ L K + A +VF C + + FNILI G+C+ +V
Sbjct: 220 NRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVK 279
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+A K KEM + +PDVVS++C I + R + L+EM+ G P + YT+V+
Sbjct: 280 EAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVI 339
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+A ++EAL+V ++M CLPD Y++L+ L K R+ DA ++ +M+++GV
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVT 399
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P++ T+ T+I C + ENAL+L + +PD TY L+ CRK + N L
Sbjct: 400 PDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANEL 459
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
M ++ + TY+ L+ E G++E A F +EM+ KG +P TY
Sbjct: 460 WDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYN 511
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 98/348 (28%), Positives = 172/348 (49%), Gaps = 8/348 (2%)
Query: 177 FCLMWEL---VKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
FC + E+ VK E+ + YV+ + + S ++ R G D A R MK G+ D
Sbjct: 272 FCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPD 331
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
++++ + S+ A +V E C+P +N L++G CK ++ DA+K +
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLP-DVVTYNTLLNGLCKQHRLLDAEKLL 390
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
EM ++G +PD+ ++T I YCR+ +F + + +P V+TY ++ + +
Sbjct: 391 NEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRK 450
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+ +A ++++ M + + LP+ YS LI + G+V+DA ++M K+G +PN+ TY
Sbjct: 451 GDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTY 510
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N++I C + + LQKM +D PD T+ L+ +++ M + M K
Sbjct: 511 NSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEK 570
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
V DA TY ++ G E G ++ A F+ M GI P TY L
Sbjct: 571 EMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSL 618
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 166/354 (46%), Gaps = 6/354 (1%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST-IMRRLVRGGRYDDA 216
TP++ ++ ++ + + + ++EM L G V + T ++ R G +A
Sbjct: 294 TPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGL--GLVPDGVIYTMVIGGFCRAGSMSEA 351
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHG 275
+ M +G D + L++ L K + + A K+ E ++ + F LIHG
Sbjct: 352 LRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHG 411
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+C+ ++A + + +Q PDVV+Y I+ CR+ D K ++ +M + P+
Sbjct: 412 YCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPN 471
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
ITY+I++ + + Q+ +A ++M LP+ Y+S+I ++G VK + +
Sbjct: 472 HITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQ 531
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M++ V P+++T+NT+I A + ME+++ +PD TY ++ +
Sbjct: 532 KMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQG 591
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
M+ + M + + D TY SL+ G + +G + A +EMI +G P
Sbjct: 592 NMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAP 645
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 175/384 (45%), Gaps = 5/384 (1%)
Query: 161 PEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
P++++ ++ +S+K +E + + + + V + + ++ L R G A EA+
Sbjct: 87 PQVFDLLIRTYTQSRKPREAFEAFRLLLD-HRVPVPASASNALLAVLSRAGWPHLAQEAY 145
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKT 279
R + E + L++++ + K + A V E K C+ N+LI +
Sbjct: 146 RLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRA 205
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
VD A + M +G P +V+Y ++ C+ + F K + + M + P V ++
Sbjct: 206 GDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSF 265
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
I++ + ++ EA+K Y++M+ PD +S LI + S+ G + A +MK
Sbjct: 266 NILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKG 325
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G+VP+ + Y +I C AL++ +M C PD TY LL C++ R+
Sbjct: 326 LGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLD 385
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
LL M + V+ D T+ +L+ G G E A F+ ++ + + P TY L +
Sbjct: 386 AEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLID 445
Query: 520 KL-EKKRLGNAKERINKLLAHAKE 542
+ K L A E + + HA+E
Sbjct: 446 GMCRKGDLAKANELWDDM--HARE 467
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 147/290 (50%), Gaps = 6/290 (2%)
Query: 155 TGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
G+ P++ YNT+++ L K + +L+ EM+E L T +T++ R G
Sbjct: 359 VGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEE-RGVTPDLCTFTTLIHGYCRQGN 417
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFN 270
+++A++ F + + + D + L+D + + + A +++ + ++ +P + ++
Sbjct: 418 FENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILP-NHITYS 476
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
ILI C+ +V+DA + EM ++G P++ +Y I+ YCR + +K L++M++
Sbjct: 477 ILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQD 536
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P +IT+ ++H K + ++ A V+ M+ + PD Y+ +I S+ G ++DA
Sbjct: 537 NVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDA 596
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+F+ M G+ P+ TY ++I+ + A +L +M PD
Sbjct: 597 GRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/212 (19%), Positives = 91/212 (42%)
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+P + I Y + + R+ + + + + ++ L +A + A +
Sbjct: 84 TPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQE 143
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
Y + S D + + ++ K A+ + +M+K+ V P+V+T+N +I +
Sbjct: 144 AYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARF 203
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
+ + A+ L+ M KP TY +LK C+ +R + M + V+ D
Sbjct: 204 RAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVR 263
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVP 509
++ L+ G G+++ A F++EM + + P
Sbjct: 264 SFNILIGGFCRVGEVKEAVKFYKEMQHRYVTP 295
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 90/220 (40%), Gaps = 20/220 (9%)
Query: 164 YNTMVDVL---GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
YN+++D + G K +W+ + + L N T S ++ G+ +DA
Sbjct: 440 YNSLIDGMCRKGDLAKANELWDDMHAREILPNHI----TYSILIDSHCEKGQVEDAFGFL 495
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-------FKDCIPLSSQIFNILI 273
M K G + R + ++ + +V+ + FL+ F D I FN LI
Sbjct: 496 DEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQ-FLQKMRQDNVFPDLI-----TFNTLI 549
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
HG+ K + A M ++ PD V+Y I + + + + K M + G +
Sbjct: 550 HGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIE 609
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
P TY +++ A +A +++++M PD F
Sbjct: 610 PDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDDKF 649
>gi|297738349|emb|CBI27550.3| unnamed protein product [Vitis vinifera]
Length = 330
Score = 169 bits (429), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 164/314 (52%), Gaps = 50/314 (15%)
Query: 100 ISKILSKQYQSPDKVVEAL---KGC-GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
+S+I ++ S D+V ++L + C + +S +LV+ L RF +D A G F WA+++
Sbjct: 49 VSRI--REGSSDDEVFKSLVHDEACNAIPMSQNLVDVLLHRFKDDWKSALGLFRWAESRL 106
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY H PE Y+ MVD+LGK K+ M L++EM + N L +ST
Sbjct: 107 GYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQGN-----LVRLST------------- 148
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
K+T ++++L+DTL K VE A +FLE K I ++ FNI IHG
Sbjct: 149 --------------KNTESMNLLLDTLCKERKVEQARAIFLELKPHISPNTHTFNIFIHG 194
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
WCK +VD+A+ ++EM G P V+SY+ I+ YCR+ +FRKV + L +MQ +GC P+
Sbjct: 195 WCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPN 254
Query: 336 VITYTIVMHALGK-------AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS--KAGR 386
V+TYT +M +L K A + ++E+M P Y + +L K
Sbjct: 255 VVTYTTIMCSLTKRLFVFLRANKCEWGYNLFEEMVGKAITPR---YKTCALLLDEIKQKN 311
Query: 387 VKDANEIFEDMKKQ 400
+ DA E E KQ
Sbjct: 312 MHDAAERIEVFMKQ 325
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 145/318 (45%), Gaps = 46/318 (14%)
Query: 235 LSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
+ +++ + +G+S + +K + + C IP+S + ++L+H R DD + A+ +
Sbjct: 45 IDIIVSRIREGSSDDEVFKSLVHDEACNAIPMSQNLVDVLLH-----RFKDDWKSALG-L 98
Query: 293 FQQ-----GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG----CKPSVITYTIVM 343
F+ G+ +Y ++ + K K+ ++EM++ + + +++
Sbjct: 99 FRWAESRLGYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQGNLVRLSTKNTESMNLLL 158
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
L K +++ +A ++ ++K P+T ++ I KA RV +A ++MK G
Sbjct: 159 DTLCKERKVEQARAIFLELKPH-ISPNTHTFNIFIHGWCKANRVDEAEWTIQEMKGHGCR 217
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P V++Y+T+I S C +S +LL M+ C P+ TY + MC KR+ V
Sbjct: 218 PCVISYSTIIQSYCRQSNFRKVYELLDDMQAQGCAPNVVTYTTI--MCSLTKRLFV---- 271
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ + K E + FEEM+ K I P + T +L +++++
Sbjct: 272 ----------------------FLRANKCEWGYNLFEEMVGKAITPRYKTCALLLDEIKQ 309
Query: 524 KRLGNAKERINKLLAHAK 541
K + +A ERI + K
Sbjct: 310 KNMHDAAERIEVFMKQMK 327
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 154/305 (50%), Gaps = 1/305 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T I+ RL + R DDA+ M G++ D + ++ L + VE A +F +
Sbjct: 11 TYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKM 70
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K I + +N LI+G CK +++ A + KEM +G+ P VSY I+ +C++KD
Sbjct: 71 VKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDL 130
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
D +M C P+V+TYT ++ L K+ ++ A +V + M P+ + YS L
Sbjct: 131 VAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCL 190
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I K RV +A+++ E M QG+ P V+TYN +++S C + E+A KL + M + C
Sbjct: 191 IDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRC 250
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P TY LL+ C K++ + L M DA TY +L GL +GK+ A
Sbjct: 251 HPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQE 310
Query: 498 FFEEM 502
E+M
Sbjct: 311 LMEKM 315
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 115/223 (51%)
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PD ++Y +E C+ K T++EM +G KP Y V+ L + +++ EA +
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+EKM P+ Y++LI L KA R++ A E+F++M +G VP ++YNT+I C
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ + A + KM C P+ TY L+ + +++ +L M K V+ + T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
Y+ L+ G + +++ A E+M+++GI P TY +L L
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSL 229
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 122/237 (51%), Gaps = 4/237 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL-ATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT+++ L K+ + +EL KEM GYV + +T++ + A + F
Sbjct: 82 YNTLINGLCKAWRIETAYELFKEM--AGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDK 139
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M + + + L+D L K V+ A +V K + + ++ LI G+CK R+
Sbjct: 140 MVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRR 199
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD+A K +++M QG +P VV+Y + CR + M ++ C P+V+TY
Sbjct: 200 VDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNT 259
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
++ AL KQ++ A ++Y +M + C PD Y +L + L++AG+V +A E+ E MK
Sbjct: 260 LLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 1/277 (0%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P + + ++ CKT+++DDA ++EM +G PD Y + C+E+ +
Sbjct: 6 PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
++M ++ P+V+TY +++ L KA +I A +++++M +P Y++LI
Sbjct: 66 LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K + A ++F+ M + VPNV+TY T+I + + A ++L M + P+
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY+ L+ C+ +R+ + LL M ++ TY L+ L + KLE A F M
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245
Query: 503 ISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLA 538
+ P TY L L K+L A +++A
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIA 282
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 126/240 (52%), Gaps = 3/240 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T +T++ L + R + A E F+ M G + + L+D K + A VF
Sbjct: 78 NVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVF 137
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ +C+P + + LI G K+ KV A + + M ++G +P+V +Y+C I+ +C+
Sbjct: 138 DKMVRSNCVP-NVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 196
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + L++M +G P+V+TY I++++L +A ++ +A K++ M C P
Sbjct: 197 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 256
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++L+ L ++ A+ ++ +M +G P+ +TY+T+ + A +L++KM+
Sbjct: 257 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 316
>gi|242054767|ref|XP_002456529.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
gi|241928504|gb|EES01649.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
Length = 517
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 122/413 (29%), Positives = 201/413 (48%), Gaps = 6/413 (1%)
Query: 118 LKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKF 177
L GCG S LV L R N A F WA Q GY ++M+ +L K ++F
Sbjct: 94 LDGCGAEASEPLVVAALSRLRNSCAAAHAAFRWAAAQPGYAPGRRACHSMLAILAKHRRF 153
Query: 178 CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
L+ EM + S A + ++RR AV AFR + +G +
Sbjct: 154 DAARALLDEMRRAS--MASPAAVLLLVRRHCAARDVAAAVAAFRALPSFGFDTGVAEFHG 211
Query: 238 LMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTR-KVDDAQKAMKEMFQQG 296
L+ L + +V+ A + + + P ++ FNI+++GWC + +A++ M ++G
Sbjct: 212 LLSALCRYKNVQDAEHLLISCEKEFPFETKSFNIVLNGWCNIVCSLREAKRFWSSMERKG 271
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
DVVSY I + + V M E G P Y ++ AL K + + A
Sbjct: 272 IDRDVVSYGSMISCFSKAGSLHSVMKLFNHMNEAGVAPDRKVYNAIVFALAKGRCVKAAK 331
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ M+ PDT+ ++SLI L KA +V++A E+F+ M ++G+ P+V T++ +++
Sbjct: 332 MLVRTMEEKQVAPDTATFNSLIGPLCKARQVQEAMEMFDAMLERGLSPSVRTFHALLN-- 389
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
AR+ E LL KM++ C+P+ +TY L++ CR ++ + + L + M N +S D
Sbjct: 390 VARNSTE-VFDLLDKMKQLQCEPEMDTYIMLIRKFCRWRQHESVEKLWSAMPANGLSPDR 448
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNA 529
Y L+ GL +G+LE A ++ EM SKG P T +M+ LE + L A
Sbjct: 449 SAYIVLIHGLFLNGRLEEAAKYYGEMKSKGFSPEKKTEEMITAWLEGRELAKA 501
>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
Length = 561
Score = 169 bits (428), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 105/385 (27%), Positives = 198/385 (51%), Gaps = 11/385 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y +++ L K+ K +EL+ EM + +A + ++R L + GR+ DA+ F+ +
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRD-RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTV 91
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQIFNILIHGWCKTR 280
D ++L+D LVK VE A+++F C+P + + +I+G CK
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLP-NVVTYTTVINGLCKDG 150
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+D A + + M + G P+V++Y+ +E C+ K L+EM +G +P VI Y
Sbjct: 151 KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYN 210
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+++ L K+++++EAL++ + M C P Y+SL+ + ++ +V A + + M ++
Sbjct: 211 TLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSER 270
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR---- 456
G P+V+ YNT+I+ C + ++A LL++M C PD TY+ ++ C+ R
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330
Query: 457 --MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ +L M + +AGTYA ++ GL + K + A + MI +VP S++
Sbjct: 331 WKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSF 390
Query: 515 KMLEEKLEKKRLGNAKERINKLLAH 539
M+ L K +A +I +++
Sbjct: 391 SMVIGSLCKSHDLDAAYKIFGMMSE 415
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 195/404 (48%), Gaps = 18/404 (4%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM-STIMRRLVRGG 211
+TG Y+ +V+ L K+ + + L++EM G+ M +T++ L +
Sbjct: 163 NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTR--RGFQPDVIMYNTLLNGLCKSR 220
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIF 269
R D+A+E + M + G + LM+ + V+ A+++ + + C P +
Sbjct: 221 RLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN-Y 279
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD------- 322
N +I G C+ ++DDAQ +K+M PDV++Y+ I+ C KD+R D
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC--KDWRVDADWKLEAAC 337
Query: 323 -TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L+ M++ GC P+ TY +V+ L +A++ +AL + +M + +PD S +S +I L
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K+ + A +IF M ++ PN + Y +I E + A+++ + M E +P
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF-RPGV 456
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY +L C R++ ++ M + D +Y +L+RGL +E A F+
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516
Query: 502 MISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAKEQK 544
+ +KG Y +L +L +KKRL +A NKL+ +Q+
Sbjct: 517 VEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYKQQ 560
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 158/326 (48%), Gaps = 5/326 (1%)
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
M+ + LVR G++ AV+ FR + + L+ L K ++ AY++ E +
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57
Query: 260 D-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
D IP + N +I G CK + DA K + +PD++++ ++ +
Sbjct: 58 DRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117
Query: 319 KVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + M C P+V+TYT V++ L K +++ A+++ + M C P+ YS L
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ L KAGR + ++M ++G P+V+ YNT+++ C + AL+L+Q M C
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P TY L+++ CR K++ L+ M + D Y +++ GL +L+ A +
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
++M++ VP TY + + L K
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCK 323
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 37/241 (15%)
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P+ +Y I C+ + + L EM+++G P V + V+ L KA + +AL
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGY 87
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG-VVPNVLTYNTMISSAC 417
++ + C PD ++ L+ L K+GRV++A +IFE M +PNV+TY T+I+ C
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
+ + A++LL M E C P N +
Sbjct: 148 KDGKLDRAIELLDLMNETGCCP---------------------NVI-------------- 172
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
TY+ LV GL ++G+ + + +EM +G P Y L L K +RL A E + +
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232
Query: 537 L 537
+
Sbjct: 233 I 233
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 206/396 (52%), Gaps = 13/396 (3%)
Query: 148 FTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIM 204
F K +G TP + YNT++D L K+ K +EL++ + +++G+V + T + I+
Sbjct: 386 FELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESL--VSSGFVPDVVTYTIIV 443
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCI 262
L + GR D A++ GM K G + LM+ L + V+ A+ +F E KDC
Sbjct: 444 DGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT 503
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+ + L++G+CK+ + +AQK + + +G +P + Y ++ YC+E ++ +
Sbjct: 504 A-DALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYNALMDGYCKEGRLDEIPN 559
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
++M +GC P++ TY IVM L K +++EA E M S C+PD Y+ +I L
Sbjct: 560 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 619
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
KA + K+A ++ + M + G+ P+ +TYNT+++ C ++A+ +L+ M + PD
Sbjct: 620 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 679
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA-GTYASLVRGLIESGKLELACSFFEE 501
TY L+ + R+ L+ M +N + A TY +++ L + G L+ A +
Sbjct: 680 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH 739
Query: 502 MISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
M G+ TY + ++L K+ RL A ++++
Sbjct: 740 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 775
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/467 (26%), Positives = 213/467 (45%), Gaps = 49/467 (10%)
Query: 76 HRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLR 135
HR S SE+ + DV + +L QS + E L+ ++ ++V + L+
Sbjct: 46 HRQLHLSTARKLARSESLQQDVLDLLGLL----QSGSNIRERLEQWRGTLQPAVVSRVLQ 101
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHT--------------------PEMYNTMVDVLGKS- 174
R + T A FF WA + G+ H+ P M+ M+D G +
Sbjct: 102 RLKDPQT-AIVFFVWAGDR-GFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDA-GYAP 158
Query: 175 ---------KKFCLMWELVKEMDELNNGYV-----SLATMSTIMRRLVRGGRYDDAVEAF 220
K C M ++ K L+ V ++ + + R + GR DA+E F
Sbjct: 159 DSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIF 218
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NILIHGWCK 278
R + D A + ++ + N + A + E + ++ +F NILI G CK
Sbjct: 219 RNIP----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNE-RKVAPDVFTYNILIDGLCK 273
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
K D A + + EM +G +PD V++ ++ C+ F + L M E+ C+PS T
Sbjct: 274 ASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCT 333
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ L K + ++ A + ++ S +PD YS L L K GR+ +A E+ ++M
Sbjct: 334 YNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMS 393
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+G PN++TYNT+I C S+ E A +LL+ + PD TY ++ C++ R+
Sbjct: 394 GKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLD 453
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
++ M K + TY +L+ GL +G+++ A F+EM+SK
Sbjct: 454 KALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 500
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 160/373 (42%), Gaps = 41/373 (10%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+ +M + GR D+ F M G + + +++MD L K V+ A+ FLE
Sbjct: 542 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP-FLESMH 600
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C+P +NI+I G K K +A++ + +M Q G PD V+Y + +C+E+ F
Sbjct: 601 SAGCVP-DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 659
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT-SFYSS 376
LK M + G P +TY ++ L + ++ +A ++ +M + C+ + Y++
Sbjct: 660 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 719
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE-- 434
+I L K G +K A + + M GV N +TYN I C + A LL +M+
Sbjct: 720 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR 779
Query: 435 ----------DLCKPD---------------------CETYAPLLKMCCRKKRMKVLNFL 463
LCK + T+ L+ + KR+ L
Sbjct: 780 DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 839
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
L M + S TY ++ L + K++ A F+EM +GIV +Y +L L
Sbjct: 840 LGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCG 899
Query: 524 KRLGNAKERINKL 536
+ G KE + L
Sbjct: 900 Q--GRGKEALQVL 910
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/314 (24%), Positives = 136/314 (43%), Gaps = 40/314 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFR 221
YN ++D L K+ K E + +D++ + T +T+M + + R+DDAV +
Sbjct: 611 YNIIIDGLFKASK---PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 667
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKT 279
M K GV+ D + L+ L + N + AY++ E C+ + +N +I CK
Sbjct: 668 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 727
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE---------- 329
+ A M M G + V+Y FI+ C+E + L EM
Sbjct: 728 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTV 787
Query: 330 -----------------------KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
KG + T+ +++ A K K+++EAL + M
Sbjct: 788 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRG 847
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C P Y+ +I L K +V A E+F++M +G+V + ++Y +I C + + AL
Sbjct: 848 CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEAL 907
Query: 427 KLLQKMEEDLCKPD 440
++L++M C+ D
Sbjct: 908 QVLEEMASSDCEID 921
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 164/402 (40%), Gaps = 62/402 (15%)
Query: 152 KTQTGYMHTP--EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA---------TM 200
K G TP ++YN ++D K + +DE+ N + +A T
Sbjct: 527 KVVDGIRGTPYIDVYNALMDGYCKEGR----------LDEIPNVFEDMACRGCVPNIKTY 576
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FK 259
+ +M L + G+ D+A M G D + ++++D L K + + A +V + +
Sbjct: 577 NIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQ 636
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI----------- 308
IP + +N L+ +CK + DDA +K M + G PD V+Y I
Sbjct: 637 AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGD 696
Query: 309 -------------------------EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+ C+E ++ + M G + + +TY I +
Sbjct: 697 AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 756
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK-QGV 402
L K +++EA + +M D L D Y+++I L KA ++ A+++ +M +G+
Sbjct: 757 DRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 813
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
T+N +I + + AL LL M + C P TY ++ C+ ++
Sbjct: 814 CITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWE 873
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L M + + +Y L+ GL G+ + A EEM S
Sbjct: 874 LFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMAS 915
>gi|302780493|ref|XP_002972021.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
gi|300160320|gb|EFJ26938.1| hypothetical protein SELMODRAFT_412471 [Selaginella moellendorffii]
Length = 2052
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 117/411 (28%), Positives = 203/411 (49%), Gaps = 12/411 (2%)
Query: 121 CGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLM 180
CG +S +V L + D+ P FF W + GY HT +N +++ L +++
Sbjct: 1623 CG-KLSTDIVVDVLNH-ARDVEPTIQFFEWCHGRHGYTHTAFAFNRLLEFLVNKRQYKRA 1680
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
+++ + ++ + T STI+R G A+ MKK V + + ++++
Sbjct: 1681 HQMLIAESKPSSFQANAFTYSTIVRGYCEDGETRQALALLEHMKKAEVPANAKLYNIILT 1740
Query: 241 TLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
L K + A + + C P +NILI+ CK +++DAQ + EM Q
Sbjct: 1741 HLCKHGKEKEALDLLHSMATTSCAP-DIYTYNILINALCKVGRLEDAQ-GLVEMMQAREC 1798
Query: 299 P-DVVSYTCFIEHYCREKDFR-KVDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQIN 353
P D+V+Y I CR+ + R +V+ + EM +KG P+ +TYT+V+ AL + K
Sbjct: 1799 PTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDE 1858
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
+A KV + M + C D Y+ LI +KAG + A ++F +M +G +P+V+TYN+++
Sbjct: 1859 QAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSIV 1918
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C + E A KL +M+ P+ TY + C + RM+ + L M K +
Sbjct: 1919 DGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL- 1977
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+DA +Y +L+ + + GK +L EM+ KG P T+ ++ E L K+
Sbjct: 1978 VDAISYVALISTICKLGKGKLGFQLLREMLEKGFKPNLVTFNVVFEALSKE 2028
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/283 (26%), Positives = 126/283 (44%), Gaps = 8/283 (2%)
Query: 269 FNILIHGWCKTRKVDDA-QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
FN L+ R+ A Q + E F + +Y+ + YC + + R+ L+ M
Sbjct: 1664 FNRLLEFLVNKRQYKRAHQMLIAESKPSSFQANAFTYSTIVRGYCEDGETRQALALLEHM 1723
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++ + Y I++ L K + EAL + M + C PD Y+ LI L K GR+
Sbjct: 1724 KKAEVPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRL 1783
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSAC----ARSEEENALKLLQKMEEDLCKPDCET 443
+DA + E M+ + +++TYNT+I C R E A +L ++M + P T
Sbjct: 1784 EDAQGLVEMMQARECPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVT 1843
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y ++ R K + +L M +N + D TY L+ ++G ++ A F EM
Sbjct: 1844 YTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMP 1903
Query: 504 SKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
++G +P TY + + K E NKL A K + F
Sbjct: 1904 TRGCIPDVVTYNSIVDGFCK---AGKVEEANKLFAEMKARGIF 1943
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 168 bits (426), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 192/417 (46%), Gaps = 41/417 (9%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMR 205
FF WA +Q Y H YN +++VL KS + ++ +M L G V + T ++R
Sbjct: 3 FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDM--LAAGCVPNTYTYGYLLR 60
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-------- 257
L + R+++A FRGM G + + S+L+ L +G V+ A ++ E
Sbjct: 61 SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120
Query: 258 -----------------------------FKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
++ C P ++N+LI G+ K + +A +
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPP-DGVVYNVLIDGFSKKGDMGEAYRL 179
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+EM ++G P V +Y + + R+ +F +V K+M +GC P++ T+ ++ K
Sbjct: 180 FEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK 239
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
+ EA +++ +M+S C PD Y++LI + G+ +A + +M + GV P++++
Sbjct: 240 MGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YN +I ++A+KL ++ + +PD +Y+ ++ CR ++ + M
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
N + DA LV GL +L +C F+ M+ VP Y +L KL K +
Sbjct: 360 ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAK 416
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 174/371 (46%), Gaps = 6/371 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ ++ L + +K EL+ EM ++ G+ ++ T +++ L + G+ +AV+ F
Sbjct: 90 YSILIAGLCRGQKVDEAAELLNEM--IDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSR 147
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M G D +VL+D K + AY++F E K CIP + +N L+ G+ +
Sbjct: 148 MVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP-TVFTYNSLLSGFSRKG 206
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ Q K+M +QG P++ ++ ++ +C+ D + EM+ GC P V++Y
Sbjct: 207 EFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYN 266
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ + + +EA ++ +M PD Y+ LI SK+G + A ++F ++ K
Sbjct: 267 TLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS 326
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+ +Y+T+I C + A + + M + PD PL+ CR +R+
Sbjct: 327 GLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTES 386
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L M K + Y L+ L ++ + + C F E+ +G P K++ E
Sbjct: 387 CELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILET 446
Query: 521 LEKKRLGNAKE 531
L + +A E
Sbjct: 447 LRRSDDKDAAE 457
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ L+ +L+K+GR + DM G VPN TY ++ S C E A + + M
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
C P+ +Y+ L+ CR +++ LL M + TY SL+ GL + GKL+
Sbjct: 80 AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKR-LGNAKERINKLL 537
A F M+ +G P Y +L + KK +G A ++L
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEML 184
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 168/322 (52%), Gaps = 5/322 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T + ++R G + F M++ G + + L+D K ++ A+ + +
Sbjct: 12 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 71
Query: 257 EFKDCIP-LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
K P L S +N++I+G C+ + +A + ++EM +GF+PD V+Y + YC+E
Sbjct: 72 SSKGMQPNLIS--YNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEG 129
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+F + EM G PSV+TYT +++++ KA+ +N A++ +++M+ P+ Y+
Sbjct: 130 NFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYT 189
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI S+ G + +A I +M + G P+V+TYN I C E AL ++Q+M E
Sbjct: 190 TLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEK 249
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
PD +Y+ ++ CRK + + M + VS DA TY+SL++GL E +L A
Sbjct: 250 GLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEA 309
Query: 496 CSFFEEMISKGIVPYHSTYKML 517
C +EM+ G+ P TY L
Sbjct: 310 CDLSQEMLDMGLPPDEFTYTTL 331
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 190/386 (49%), Gaps = 13/386 (3%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMD-----ELNNGYVSLATMSTIMRRLVRGGRYD 214
+P +Y + + G FC + EL K + E N ++ T +T++ + GR D
Sbjct: 7 SPNVYTYNILIRG----FCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRID 62
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNIL 272
+A + M G++ + + +V+++ L + S++ A+++ E +K P +N L
Sbjct: 63 EAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTP-DEVTYNTL 121
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
++G+CK A EM + G SP VV+YT I C+ ++ + + +M+ +G
Sbjct: 122 LNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGL 181
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+P+ TYT ++ + +NEA ++ +M P Y++ I R+++A
Sbjct: 182 RPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALG 241
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ ++M ++G+ P+V++Y+T+IS C + E + A ++ Q+M E PD TY+ L++ C
Sbjct: 242 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 301
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+R+ L M + D TY +L+ G L A +EMI KG +P
Sbjct: 302 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 361
Query: 513 TYKMLEEKLEKK-RLGNAKERINKLL 537
TY +L L K+ R AK + KL+
Sbjct: 362 TYSVLINGLNKQARTREAKRLLFKLI 387
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 181/386 (46%), Gaps = 21/386 (5%)
Query: 160 TPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
TP+ YNT+++ G K+ LV + + NG S+ T + ++ + + + A
Sbjct: 112 TPDEVTYNTLLN--GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRA 169
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHG 275
+E F M+ G+ + R + L+D + + AY++ E + S +N IHG
Sbjct: 170 MEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHG 229
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
C ++++A ++EM ++G +PDVVSY+ I +CR+ + + +EM EKG P
Sbjct: 230 HCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPD 289
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+TY+ ++ L + +++ EA + ++M PD Y++LI G + A + +
Sbjct: 290 AVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHD 349
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC---- 451
+M +G +P+ +TY+ +I+ ++ A +LL K+ + P TY L++ C
Sbjct: 350 EMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIE 409
Query: 452 -----------CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
C K M + + M + + Y ++ G G L A + ++
Sbjct: 410 FKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYK 469
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRL 526
EMI G VP+ T L + L K+ +
Sbjct: 470 EMIHSGFVPHTVTVITLIKALFKEGM 495
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 116/253 (45%), Gaps = 7/253 (2%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M + SP+V +Y I +C + +K EM+ GC P+V+TY ++ A K +
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
I+EA + + M S P+ Y+ +I L + G +K+A EI E+M +G P+ +TYNT
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+++ C AL + +M + P TY L+ C+ + + M
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM------LEEKLEKKR 525
+ + TY +L+ G G L A EM G P TY + E++E+
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA- 239
Query: 526 LGNAKERINKLLA 538
LG +E + K LA
Sbjct: 240 LGVVQEMVEKGLA 252
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/313 (21%), Positives = 115/313 (36%), Gaps = 65/313 (20%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
R N++T + GF T ++H + M + LG +V+EM E G
Sbjct: 206 RILNEMTES-GFSPSVVTYNAFIHGHCVLERMEEALG----------VVQEMVE--KGLA 252
Query: 196 -SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+ + STI+ R G D A + + M + GV D S L+ L + + A +
Sbjct: 253 PDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDL 312
Query: 255 FLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT-------- 305
E D +P + LI+ +C ++ A EM +GF PD V+Y+
Sbjct: 313 SQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNK 372
Query: 306 ------------------------------------------CFIEHYCREKDFRKVDDT 323
I+ +C + + D
Sbjct: 373 QARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRV 432
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+ M E+ KP Y +++H + + +A +Y++M +P T +LI L K
Sbjct: 433 FESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFK 492
Query: 384 AGRVKDANEIFED 396
G ++ +E+ D
Sbjct: 493 EGMNEEMSEVIGD 505
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 110/387 (28%), Positives = 197/387 (50%), Gaps = 11/387 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEA-FR 221
YN++++ K K EL K M E G+ + T STI+ L + G+ +A+E F
Sbjct: 81 YNSLLNAFCKETKMKEAMELFKTMAE--KGFEPDVVTYSTIISGLCKTGKVTEALEMLFH 138
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKT 279
M + G +T A + L++ L K ++E AYK+ E K +P + +N ++ G C+
Sbjct: 139 KMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVP-DNITYNTILSGLCRM 197
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
KV +A++ M +G+SPDVV+Y ++ +E + K++ KG P +TY
Sbjct: 198 GKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTY 257
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ L + ++EA ++++KM + C P+ + YS ++ +A +V DA+++ E+M K
Sbjct: 258 NSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSK 317
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G VP+V+TYN ++ C + + A +L M ++ C PD +Y+ +L C+ ++
Sbjct: 318 IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHD 377
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L M + + D T+ L+ GL ++GKL+ A ++M G P + Y L
Sbjct: 378 ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMN 437
Query: 520 KLEKKRLGNAKERINKLLAHAKEQKTF 546
L K+ +R L A ++K F
Sbjct: 438 GLRKQGRHIQADR----LTQAMKEKGF 460
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 162/331 (48%), Gaps = 4/331 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +++ + G+ D + F M G+ D ++L+D K V+ A +++ E
Sbjct: 10 TFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEM 69
Query: 259 KDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ L I+ N L++ +CK K+ +A + K M ++GF PDVV+Y+ I C+
Sbjct: 70 VS-VGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGK 128
Query: 317 FRKVDDTL-KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ + L +M E+GC + + Y +++ L K + I A K+ E+M S +PD Y+
Sbjct: 129 VTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYN 188
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+++ L + G+V +A + F+ M +G P+V+ YN ++ + + + A+KL + +
Sbjct: 189 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAK 248
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
PD TY +L RK M + M + + + TY+ ++ G + K++ A
Sbjct: 249 GYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDA 308
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
EEM G VP TY +L + L K L
Sbjct: 309 HKVLEEMSKIGAVPDVVTYNILLDGLCKTNL 339
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 154/322 (47%), Gaps = 42/322 (13%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN +++ L K + ++L++EM + GYV T +TI+ L R G+ +A + F
Sbjct: 152 YNALINGLCKDENIERAYKLLEEM--ASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDS 209
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE------------------------- 257
M G D A + L+D L K + A K+F +
Sbjct: 210 MPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 269
Query: 258 -------FK-----DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
FK C P + ++I++ G C+ +KVDDA K ++EM + G PDVV+Y
Sbjct: 270 MDEAEEMFKKMVASGCAP-NGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYN 328
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
++ C+ K + M + GC P +++Y++V++ L K ++++A ++++M
Sbjct: 329 ILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIER 388
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
+PD ++ L+ L KAG++ +A ++ + M G P+ + YNT+++ + A
Sbjct: 389 KLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQA 448
Query: 426 LKLLQKMEEDLCKPDCETYAPL 447
+L Q M+E DC APL
Sbjct: 449 DRLTQAMKEKGFLSDCFK-APL 469
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 116/228 (50%), Gaps = 1/228 (0%)
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
SP+ ++ ++ +C++ R ++M + G P I Y I++ K +++EA +
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+YE+M S P Y+SL+ K ++K+A E+F+ M ++G P+V+TY+T+IS C
Sbjct: 65 LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124
Query: 418 ARSEEENALKLL-QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
+ AL++L KM E C + Y L+ C+ + ++ LL M D
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
TY +++ GL GK+ A FF+ M S+G P Y L + L K+
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKE 232
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 3/201 (1%)
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C P+ T+ +V+ + K ++ + K++E+M + PD Y+ LI +K GRV +AN
Sbjct: 4 CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++E+M G+ P++ TYN+++++ C ++ + A++L + M E +PD TY+ ++
Sbjct: 64 RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123
Query: 452 CRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ ++ + L L M + S + Y +L+ GL + +E A EEM SKG VP
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183
Query: 511 HSTYKMLEEKLEKKRLGNAKE 531
+ TY + L R+G E
Sbjct: 184 NITYNTILSGL--CRMGKVSE 202
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 168 bits (425), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 103/417 (24%), Positives = 192/417 (46%), Gaps = 41/417 (9%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMR 205
FF WA +Q Y H YN +++VL KS + ++ +M L G V + T ++R
Sbjct: 3 FFQWAGSQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDM--LGAGCVPNTYTYGYLLR 60
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-------- 257
L + R+++A FRGM G + + S+L+ L +G V+ A ++ E
Sbjct: 61 SLCQAQRFEEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQP 120
Query: 258 -----------------------------FKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
++ C P ++N+LI G+ K + +A +
Sbjct: 121 NVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPP-DGVVYNVLIDGFSKKGDMGEAYRL 179
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+EM ++G P V +Y + + R+ +F +V K+M +GC P++ T+ ++ K
Sbjct: 180 FEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCK 239
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
+ EA +++ +M+S C PD Y++L+ + G+ +A + +M + GV P++++
Sbjct: 240 MGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVS 299
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YN +I ++A+KL ++ + +PD +Y+ ++ CR ++ + M
Sbjct: 300 YNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMI 359
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
N + DA LV GL +L +C F+ M+ VP Y +L KL K +
Sbjct: 360 ANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAK 416
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 171/363 (47%), Gaps = 6/363 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ ++ L + +K EL+ EM ++ G+ ++ T +++ L + G+ +AV+ F
Sbjct: 90 YSILIAGLCRGQKVDEAAELLNEM--IDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSR 147
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M G D +VL+D K + AY++F E K CIP + +N L+ G+ +
Sbjct: 148 MVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIP-TVFTYNSLLSGFSRKG 206
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ Q K+M +QG P++ ++ ++ +C+ D + EM+ GC P V++Y
Sbjct: 207 EFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYN 266
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+M + + +EA ++ +M PD Y+ LI SK+G + A ++F ++ K
Sbjct: 267 TLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS 326
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+ +Y+T+I C + A + + M + PD PL+ CR +R+
Sbjct: 327 GLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTES 386
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L M K + Y L+ L ++ + + C F E+ +G P K++ E
Sbjct: 387 CELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILET 446
Query: 521 LEK 523
L +
Sbjct: 447 LRR 449
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 121/265 (45%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N L+ K+ + D +M G P+ +Y + C+ + F + + M
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+GC P+V +Y+I++ L + ++++EA ++ +M P+ Y SL+ L K G++K
Sbjct: 80 AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A ++F M +G P+ + YN +I + + A +L ++M E C P TY LL
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLL 199
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
RK + L M + + T+ +L+ G + G + A F EM S G
Sbjct: 200 SGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCP 259
Query: 509 PYHSTYKMLEEKLEKKRLGNAKERI 533
P +Y L + K + +R+
Sbjct: 260 PDVVSYNTLMRGMCSKGKPHEAQRL 284
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 167/370 (45%), Gaps = 21/370 (5%)
Query: 69 LAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL--------KG 120
+AG +++E + + + ++ H+ +V +LS + K+ EA+ +G
Sbjct: 94 IAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM-GKLKEAVDLFSRMVYRG 152
Query: 121 C---GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKF 177
C GV V N L++ ++ D+ A+ F + G + T YN+++ + +F
Sbjct: 153 CPPDGV-VYNVLIDGFSKK--GDMGEAYRLFE-EMLEKGCIPTVFTYNSLLSGFSRKGEF 208
Query: 178 CLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALS 236
+ L K+M L G V ++ T + ++ + G +A F M+ G D + +
Sbjct: 209 GRVQSLFKDM--LRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYN 266
Query: 237 VLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
LM + A ++ E + + +NILI G+ K+ +D A K E+ +
Sbjct: 267 TLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKS 326
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G PD SY+ I+ CR K+M G P ++ L + +++ E+
Sbjct: 327 GLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTES 386
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
++++ M +C+P Y+ L++ L KA R D EIF ++ ++G P+V + +I
Sbjct: 387 CELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV-EISKVILE 445
Query: 416 ACARSEEENA 425
RS+++ A
Sbjct: 446 TLRRSDDKEA 455
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ L+ +L+K+GR + DM G VPN TY ++ S C E A + + M
Sbjct: 20 YNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMA 79
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
C P+ +Y+ L+ CR +++ LL M + TY SL+ GL + GKL+
Sbjct: 80 AQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLK 139
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKR-LGNAKERINKLL 537
A F M+ +G P Y +L + KK +G A ++L
Sbjct: 140 EAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEML 184
>gi|224081867|ref|XP_002306508.1| predicted protein [Populus trichocarpa]
gi|222855957|gb|EEE93504.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/389 (26%), Positives = 204/389 (52%), Gaps = 8/389 (2%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
+++ +S V QTL ++ND A FF W +T++ + HT E YN M+D+LGK +F L W+
Sbjct: 42 LNLDSSTVFQTLSCYNNDWKRALDFFNWVETESQFQHTTETYNRMIDILGKFFEFDLSWD 101
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG-MKKYGVEKDTRALSVLMDT 241
L++ M + T + R + ++AV + +K++G+ KD + +L+D
Sbjct: 102 LIQRMRNNPFSTPNHTTFRVLFHRYISAHLVNEAVSVYEDRLKEFGL-KDETSYCILVDA 160
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLS---SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
L + V A+++ + ++I+N+++ GW K ++ +EM ++
Sbjct: 161 LCEYKHVIEAHELCFGNNNNSINVRNITKIYNMILRGWFKMGWWGKCREFWEEMDRKEVC 220
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
D+ SY+ +++ C+ K KEM+ KG K V+ Y V++A+G ++ ++ L+V
Sbjct: 221 KDLHSYSIYMDILCKSGKPWKAVKLYKEMKSKGIKLDVVAYNTVINAIGLSEGVDFVLRV 280
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
Y +M+ C P+ +++I +L + GR+K+A ++ ++M + + P+V TY+ C
Sbjct: 281 YREMRELGCQPNVVTCNTVIKLLCENGRIKEAYKMLDEMPQSYIAPDVFTYHCFFR--CL 338
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+E Q +E +C P +TY L++ R ++ + + M K S D
Sbjct: 339 EKPKEILCLFDQMIENGVC-PRMDTYVMLMRKFGRWGFLRPVFLVWKKMEKLGCSPDEFA 397
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGI 507
Y +L+ LI+ G +++A + EEM++KG+
Sbjct: 398 YNALIDALIQKGMVDMARKYDEEMMAKGL 426
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 119/257 (46%), Gaps = 5/257 (1%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
F +L H + V++A ++ ++ D SY ++ C K + +
Sbjct: 119 FRVLFHRYISAHLVNEAVSVYEDRLKEFGLKDETSYCILVDALCEYKHVIEAHELCFGNN 178
Query: 329 EKGCKPSVIT--YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
IT Y +++ K + + +E+M + D YS + IL K+G+
Sbjct: 179 NNSINVRNITKIYNMILRGWFKMGWWGKCREFWEEMDRKEVCKDLHSYSIYMDILCKSGK 238
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
A +++++MK +G+ +V+ YNT+I++ + L++ ++M E C+P+ T
Sbjct: 239 PWKAVKLYKEMKSKGIKLDVVAYNTVINAIGLSEGVDFVLRVYREMRELGCQPNVVTCNT 298
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++K+ C R+K +L M ++ ++ D TY R L E K E+ C F++MI G
Sbjct: 299 VIKLLCENGRIKEAYKMLDEMPQSYIAPDVFTYHCFFRCL-EKPK-EILC-LFDQMIENG 355
Query: 507 IVPYHSTYKMLEEKLEK 523
+ P TY ML K +
Sbjct: 356 VCPRMDTYVMLMRKFGR 372
>gi|357454671|ref|XP_003597616.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
gi|124360397|gb|ABN08410.1| Pentatricopeptide repeat [Medicago truncatula]
gi|355486664|gb|AES67867.1| hypothetical protein MTR_2g100200 [Medicago truncatula]
Length = 527
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 119/448 (26%), Positives = 194/448 (43%), Gaps = 5/448 (1%)
Query: 98 DKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGY 157
DK+ I ++ + + +AL + V+ ++ + L + FF WA Q
Sbjct: 73 DKLRGIFLQKLKGKAAIEQALSNVCIDVNVDIIGKVLNFGNLGGEAMVMFFNWALKQPMV 132
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
Y+ +V LG+ K F M +++ EM LN L +S ++ V G A+
Sbjct: 133 PRDVGSYHVIVKALGRRKFFVFMMQVLDEM-RLNGIKADLLMLSIVIDSFVNAGHVSKAI 191
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
+ F + G+ +DT L+VL+ L + V A VF K + + +N+++ GW
Sbjct: 192 QLFGNLDDLGLCRDTEVLNVLLSCLCRRCHVGAAASVFNSMKGKVSFNVDTYNVVVGGWS 251
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K +V++ +K MKEM +GFSPD + F+E R + + M+EK
Sbjct: 252 KLGRVNEIEKVMKEMEVEGFSPDFNTLAFFLEGLGRAGRMDEAVEVFGSMKEK----DTA 307
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y ++ + +K Y M SD+C P+ YS +I + +V DA +F++M
Sbjct: 308 IYNAMIFNFISIGDFDGFMKYYNGMLSDNCEPNIHTYSRMITAFLRTRKVADALLMFDEM 367
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+QGVVP T + I C+ A+ + +K + CK E Y LL + +
Sbjct: 368 LRQGVVPPTGTITSFIKQLCSYGPPYAAMMIYKKTRKLECKISMEAYKILLMRLSKFGKC 427
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + M + S D Y ++ GL G+LE A EE + KG P Y L
Sbjct: 428 GSLLSVWQEMQECGYSSDVEVYEYIISGLYNIGQLENAVLVMEEALRKGFCPSRLVYSKL 487
Query: 518 EEKLEKKRLGNAKERINKLLAHAKEQKT 545
KL L R+ + HA+ K
Sbjct: 488 SNKLLASNLTERAYRLFLKIKHARSLKN 515
>gi|326525315|dbj|BAK07927.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 189/386 (48%), Gaps = 9/386 (2%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTG--YMHTPEMYNTMVDVLGKSKKFCLMWELVKEM 187
V++TL ++ND A FF W+ + G TP + VD+LGK +F L+
Sbjct: 32 VQETLSLYTNDWRRALDFFHWSASPGGGNLRPTPSTLSRAVDILGKHFEFPQATSLLLAH 91
Query: 188 DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS 247
+ + + ++ RL DDAV AF +D + +L+D L
Sbjct: 92 HDPTDPAFLRPALRALLNRLAAANLVDDAVRAFESTAASVGLRDEASFHLLIDALCDHRR 151
Query: 248 VEHAYKVFLEFKDCIPL----SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
V+ A+ + L + P ++ N+L+ GW K R ++ +M +G + D+ S
Sbjct: 152 VDEAHHLCLGGRAAAPPPFPPGTKTHNLLLRGWAKARAWARLRQHWLDMDARGVAKDLHS 211
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y+ +++ + K KEM++K ++ Y I +HA+G A+ ++ A+++Y +M
Sbjct: 212 YSIYMDALAKSGKPWKAVKLFKEMKQKRLPVDIVAYNIAIHAVGLAEGVDFAVRMYRQMI 271
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
C P+T+ +++++ +L K GR K+ + M K G PN LTY+ S +
Sbjct: 272 EAGCRPNTATFNTIVKLLCKEGRFKEGYAFVQQMHKAGCEPNELTYHCFFQYL---SRPQ 328
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
L L +KM + C+P +TY L+K R ++ + F+ M + ++ DA Y +L+
Sbjct: 329 EVLALFEKMLQRGCRPRMDTYVMLIKRFGRWGFLRPVFFVWKTMEEQGLTPDAFAYNTLI 388
Query: 484 RGLIESGKLELACSFFEEMISKGIVP 509
L+E G ++LA + EEM++KG+ P
Sbjct: 389 DALLEKGMVDLARKYDEEMLAKGLSP 414
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 111/382 (29%), Positives = 187/382 (48%), Gaps = 16/382 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN M++ S ++ L++EM E + T S ++ LV+ G++ +A E + M
Sbjct: 286 YNCMINGFCSSGRWSEAQRLLREMFE-RKMSPDVVTFSVLINALVKEGKFFEAEELYNEM 344
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G+ +T + ++D K N ++ A ++F + K C P F+ILI G+C ++
Sbjct: 345 LPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSP-DVITFSILIDGYCGAKR 403
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VDD K + EM ++G + ++YT I +C+ + D L+EM G P+V+T
Sbjct: 404 VDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNT 463
Query: 342 VMHAL---GKAKQINEALKVYEKMKSD--------DCLPDTSFYSSLIFILSKAGRVKDA 390
++ L GK K E KV +K K D D PD Y+ LI L G+ +A
Sbjct: 464 LLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEA 523
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E++E+M +G+VP+ +TYN++I C +S + A ++ M PD T+ L+
Sbjct: 524 EELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLING 583
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ R+ + M + + +A TY +L+ G + G + A F+EMIS G+ P
Sbjct: 584 YCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPD 643
Query: 511 HSTYK-MLEEKLEKKRLGNAKE 531
T + ML K+ L A +
Sbjct: 644 TITIRNMLTGLWSKEELKRAVQ 665
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 176/386 (45%), Gaps = 48/386 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+VD + K L+++M+E++ ++ S I+ L + GR DA F M
Sbjct: 215 YGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEM 274
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
++ G+ + +N +I+G+C + +
Sbjct: 275 QEKGISPNLFT----------------------------------YNCMINGFCSSGRWS 300
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+AQ+ ++EMF++ SPDVV+++ I +E F + ++ EM +G P+ ITY ++
Sbjct: 301 EAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMI 360
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
K +++ A +++ M + C PD +S LI A RV D ++ +M ++G+V
Sbjct: 361 DGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLV 420
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK----- 458
N +TY T+I C AL LLQ+M P+ T LL C ++K
Sbjct: 421 ANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEM 480
Query: 459 -------VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
++ +H F NDV D TY L+ GLI GK A +EEM +G+VP
Sbjct: 481 FKVMQKSKMDLDASHPF-NDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDT 539
Query: 512 STYKMLEEKLEKK-RLGNAKERINKL 536
TY + + L K+ RL A + + +
Sbjct: 540 ITYNSVIDGLCKQSRLDEATQMFDSM 565
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 135/278 (48%), Gaps = 5/278 (1%)
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
IP + F ILI +C K+ A ++ + GF P +V+++ + C E +V
Sbjct: 107 IPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVED---RVS 163
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ L + CKP+VI +T +M+ L + ++ EA+ + ++M D P+ Y +++ +
Sbjct: 164 EALHFFHQI-CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 222
Query: 382 SKAGRVKDANEIFEDMKKQGVV-PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
K G A + M++ + PNV+ Y+ +I + +A L +M+E P+
Sbjct: 223 CKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPN 282
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY ++ C R LL MF+ +S D T++ L+ L++ GK A +
Sbjct: 283 LFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYN 342
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
EM+ +GI+P TY + + K+ +A ER+ L+A
Sbjct: 343 EMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMA 380
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/278 (23%), Positives = 128/278 (46%), Gaps = 26/278 (9%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGG 211
++ G + Y T++ + +L++EM +++G ++ T +T++ L G
Sbjct: 415 SRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEM--ISSGVCPNVVTCNTLLDGLCNNG 472
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI 271
+ DA+E F+ M+K ++ D H F D P Q +NI
Sbjct: 473 KLKDALEMFKVMQKSKMDLDA----------------SHP------FNDVEP-DVQTYNI 509
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G K +A++ +EM +G PD ++Y I+ C++ + M KG
Sbjct: 510 LICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKG 569
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P V+T+T +++ K ++ + L+V+ +M + + Y +LI + G + A
Sbjct: 570 FSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNINGAL 629
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+IF++M GV P+ +T M++ ++ E + A++ L
Sbjct: 630 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667
>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
Length = 561
Score = 167 bits (424), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 198/385 (51%), Gaps = 11/385 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y +++ L K+ K +EL+ EM + +A + +++ L + GR+ DA+ F+ +
Sbjct: 33 YGSLIHGLCKAGKLDQAYELLDEMRD-RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTV 91
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQIFNILIHGWCKTR 280
D ++L+D LVK VE A+++F C+P + + +I+G CK
Sbjct: 92 AGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLP-NVVTYTTVINGLCKDG 150
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+D A + + M + G P+V++Y+ +E C+ K L+EM +G +P VI Y
Sbjct: 151 KLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYN 210
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+++ L K+++++EAL++ + M C P Y+SL+ + ++ +V A + + M ++
Sbjct: 211 TLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSER 270
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR---- 456
G P+V+ YNT+I+ C + ++A LL++M C PD TY+ ++ C+ R
Sbjct: 271 GCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDAD 330
Query: 457 --MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ +L M + +AGTYA ++ GL + K + A + MI +VP S++
Sbjct: 331 WKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSF 390
Query: 515 KMLEEKLEKKRLGNAKERINKLLAH 539
M+ L K +A +I +++
Sbjct: 391 SMVIGSLCKSHDLDAAYKIFGMMSE 415
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 107/404 (26%), Positives = 195/404 (48%), Gaps = 18/404 (4%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM-STIMRRLVRGG 211
+TG Y+ +V+ L K+ + + L++EM G+ M +T++ L +
Sbjct: 163 NETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTR--RGFQPDVIMYNTLLNGLCKSR 220
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIF 269
R D+A+E + M + G + LM+ + V+ A+++ + + C P +
Sbjct: 221 RLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVIN-Y 279
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD------- 322
N +I G C+ ++DDAQ +K+M PDV++Y+ I+ C KD+R D
Sbjct: 280 NTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLC--KDWRVDADWKLEAAC 337
Query: 323 -TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L+ M++ GC P+ TY +V+ L +A++ +AL + +M + +PD S +S +I L
Sbjct: 338 EILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSL 397
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K+ + A +IF M ++ PN + Y +I E + A+++ + M E +P
Sbjct: 398 CKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF-RPGV 456
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY +L C R++ ++ M + D +Y +L+RGL +E A F+
Sbjct: 457 ATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQA 516
Query: 502 MISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAKEQK 544
+ +KG Y +L +L +KKRL +A NKL+ +Q+
Sbjct: 517 VEAKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYKQQ 560
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 158/326 (48%), Gaps = 5/326 (1%)
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
M+ + LVR G++ AV+ FR + + L+ L K ++ AY++ E +
Sbjct: 1 MNCALNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMR 57
Query: 260 D-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
D IP + N +I G CK + DA K + +PD++++ ++ +
Sbjct: 58 DRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVE 117
Query: 319 KVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + M C P+V+TYT V++ L K +++ A+++ + M C P+ YS L
Sbjct: 118 EAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVL 177
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ L KAGR + ++M ++G P+V+ YNT+++ C + AL+L+Q M C
Sbjct: 178 VEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGC 237
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P TY L+++ CR K++ L+ M + D Y +++ GL +L+ A +
Sbjct: 238 YPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQA 297
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
++M++ VP TY + + L K
Sbjct: 298 LLKQMVAARCVPDVITYSTIIDGLCK 323
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 37/241 (15%)
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P+ +Y I C+ + + L EM+++G P V + V+ L KA + +AL
Sbjct: 28 PNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGY 87
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG-VVPNVLTYNTMISSAC 417
++ + C PD ++ L+ L K+GRV++A +IFE M +PNV+TY T+I+ C
Sbjct: 88 FKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLC 147
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
+ + A++LL M E C P N +
Sbjct: 148 KDGKLDRAIELLDLMNETGCCP---------------------NVI-------------- 172
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
TY+ LV GL ++G+ + + +EM +G P Y L L K +RL A E + +
Sbjct: 173 TYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLM 232
Query: 537 L 537
+
Sbjct: 233 I 233
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 191/384 (49%), Gaps = 6/384 (1%)
Query: 137 FSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS 196
+ N + A AK G+M YN ++D + + +K + E K E+ VS
Sbjct: 144 YLNFIEKALNIVDLAKLN-GFMPGVLSYNAILDSIVRCRKPVIFAE--KVYREMIASGVS 200
Query: 197 LATMS--TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
L S ++R G + + F M++ + + ++ K ++ A+K+
Sbjct: 201 LNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKL 260
Query: 255 FLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ + + +N++I+G C+ ++++ + EM ++GF+PD V+Y + YC+
Sbjct: 261 LRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCK 320
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+F + EM G P V+TYT +++ + KA +N A++ +++M P+
Sbjct: 321 VGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVT 380
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+SLI S+ G + +A I+++M + G P ++TYN +++ C E A+ LL+ ME
Sbjct: 381 YTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGME 440
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
PD +Y+ ++ CR + + + M + VS DA TY+SL++GL E +L
Sbjct: 441 GKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLN 500
Query: 494 LACSFFEEMISKGIVPYHSTYKML 517
AC F+EM++K ++P TY L
Sbjct: 501 EACDLFQEMLNKSLLPDEFTYTSL 524
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 183/377 (48%), Gaps = 5/377 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++ + + +EM E N ++ T +T++ + R D+A + R M
Sbjct: 206 YNILIRGFCAAGNLEMGLRFFEEM-ERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSM 264
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
G+E + +++++ L + +E V E K P +N L++G+CK
Sbjct: 265 GLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP-DGVTYNTLVNGYCKVGN 323
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
A EM + G PDVV+YT I C+ + + + +M +G +P+ +TYT
Sbjct: 324 FHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTS 383
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ + ++EA +++++M P Y++L+ +GR+++A + M+ +G
Sbjct: 384 LINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKG 443
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+V++Y+T+I+ C E + A ++ +M E PD TY+ L++ C ++R+
Sbjct: 444 LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEAC 503
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M + D TY SL+ G + G L A + +EMI KG +P TY +L L
Sbjct: 504 DLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGL 563
Query: 522 EKK-RLGNAKERINKLL 537
K+ R AK + KL
Sbjct: 564 NKQARTREAKRLLLKLF 580
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 185/383 (48%), Gaps = 19/383 (4%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYD 214
G+ YNT+V+ K F L EM L NG + T ++++ + + G +
Sbjct: 303 GFAPDGVTYNTLVNGYCKVGNFHQALVLHSEM--LRNGLPPDVVTYTSLINTMCKAGNLN 360
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILI 273
A+E F M G+ + + L++ + ++ AY+++ E + P + +N L+
Sbjct: 361 RAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALL 420
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+G C + ++++A ++ M +G SPDVVSY+ I +CR ++ + EM EKG
Sbjct: 421 NGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVS 480
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P ITY+ ++ L + +++NEA ++++M + LPD Y+SLI K G + +A +
Sbjct: 481 PDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNL 540
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC-- 451
++M K+G +P+ +TYN +I+ ++ A +LL K+ D P+ TY L++ C
Sbjct: 541 HDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIESCSD 600
Query: 452 -------------CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
C K M + + M K + + Y ++ G G + A
Sbjct: 601 IEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKL 660
Query: 499 FEEMISKGIVPYHSTYKMLEEKL 521
++EM+ G +P+ T L + L
Sbjct: 661 YKEMVDFGFIPHTVTIIALVKAL 683
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 125/270 (46%), Gaps = 1/270 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR-EKDFRKVDDT 323
SS +F++++ ++ A + GF P V+SY ++ R K +
Sbjct: 131 SSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKV 190
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+EM G +V +Y I++ A + L+ +E+M+ + CLP+ Y+++I K
Sbjct: 191 YREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCK 250
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
R+ +A ++ M +G+ PN+LTYN +I+ C E +L +M+ PD T
Sbjct: 251 LKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVT 310
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y L+ C+ L + M +N + D TY SL+ + ++G L A FF++M
Sbjct: 311 YNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMH 370
Query: 504 SKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+G+ P TY L +K + RI
Sbjct: 371 VRGLRPNGVTYTSLINGFSQKGFMDEAYRI 400
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 152/335 (45%), Gaps = 26/335 (7%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + ++ GR ++A+ RGM+ G+ D + S ++ + ++ A+++
Sbjct: 412 TIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMN 471
Query: 256 LEF------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
E D I SS LI G C+ R++++A +EM + PD +YT I
Sbjct: 472 AEMVEKGVSPDAITYSS-----LIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLIN 526
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
YC+E D + + EM +KG P +TY ++++ L K + EA ++ K+ D+ +P
Sbjct: 527 GYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIP 586
Query: 370 DTSFYSSLI-----------FILSKA----GRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
+ Y +LI L K G + +A+++FE M K+ PN YN +I
Sbjct: 587 NGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIH 646
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C A KL ++M + P T L+K + + LN ++ + ++
Sbjct: 647 GHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLS 706
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
DA +LV+ + G ++ + EM G +P
Sbjct: 707 DAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLP 741
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 201/412 (48%), Gaps = 45/412 (10%)
Query: 48 LPSWIKFFDSQS-----PDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISK 102
L +K FD PD + G+ ++ +L+E RI R++SEN DV +
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 103 ILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPE 162
+++ G+ + + E + +P T++ +G
Sbjct: 121 LVN----------------GLCKNGRVDEARMLIVDKGFSP--NVITYSTLISGLCR--- 159
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFR 221
++ G S+ L ++K+ GY + T + ++ L++ R ++A E F
Sbjct: 160 ------ELRGVSEALKLFGSVLKQ------GYEPEVPTYNILIDGLLKEDRVNEAFELFS 207
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKT 279
G+ K+G+E D +V +D L K VE A + ++ K C+P N +I+G CK
Sbjct: 208 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP-DVVSHNAVINGLCKE 266
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++VD+A+ + M +G SP+ +S+ I CR ++K T KEM ++G KP+V+TY
Sbjct: 267 KRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTY 326
Query: 340 TIVMHALGKAKQ---INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
I++ L KA+Q I EA+ +++ M +PD YS+LI L KAG++ DA +
Sbjct: 327 NILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGA 386
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
M+ +G +PNV TYN++IS C + + AL+L M E C PD TY ++
Sbjct: 387 MEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 173/338 (51%), Gaps = 6/338 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LE 257
T + ++ L GGR DA + M K G D + L+ K ++ A K+F
Sbjct: 12 TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K +N LI+G+CK K+D+AQ+ ++ M + PDVV+Y + C+
Sbjct: 72 VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNG-- 129
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKA-KQINEALKVYEKMKSDDCLPDTSFYSS 376
+VD+ + +KG P+VITY+ ++ L + + ++EALK++ + P+ Y+
Sbjct: 130 -RVDEARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNI 188
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI L K RV +A E+F + K G+ P+ +TY I C E+AL +L+ M+E
Sbjct: 189 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 248
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C PD ++ ++ C++KR+ LL+ M S +A ++ +L+ G +GK + A
Sbjct: 249 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 308
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRL-GNAKERI 533
+ F+EM+ +G+ P TY +L + L K R G KE I
Sbjct: 309 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAI 346
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/395 (28%), Positives = 194/395 (49%), Gaps = 18/395 (4%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYD 214
G+ YN ++ L + L + M + GY + T +T++ + G D
Sbjct: 5 GFWPNRITYNALLSGLCNGGRMSDAQALYERM--IKAGYSPDVVTYNTLLHGFCKVGELD 62
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNIL 272
+A++ F G K G D + L++ K + ++ A ++ ++ +P +N L
Sbjct: 63 EALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVP-DVVTYNSL 121
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQE 329
++G CK +VD+A+ + +GFSP+V++Y+ I CRE R V + LK + +
Sbjct: 122 VNGLCKNGRVDEARMLI---VDKGFSPNVITYSTLISGLCRE--LRGVSEALKLFGSVLK 176
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+G +P V TY I++ L K ++NEA +++ + PD Y+ I L KAGRV+D
Sbjct: 177 QGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVED 236
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A + +DM ++G VP+V+++N +I+ C + A LL ME C P+ ++ L+
Sbjct: 237 ALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLIC 296
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES---GKLELACSFFEEMISKG 506
CR + K M K V TY LV GL ++ G+++ A + F+ MI KG
Sbjct: 297 GQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKG 356
Query: 507 IVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHA 540
VP TY L + L K +L +A+ + + A
Sbjct: 357 RVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKG 391
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/388 (27%), Positives = 179/388 (46%), Gaps = 18/388 (4%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
+L A F A + G++ YN +++ K+ K +++ M N +
Sbjct: 59 GELDEALKIFDGA-VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVS-ENLVPDVV 116
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG-----NSVEHAYK 253
T ++++ L + GR D+A + V+K + TL+ G V A K
Sbjct: 117 TYNSLVNGLCKNGRVDEA-------RMLIVDKGFSPNVITYSTLISGLCRELRGVSEALK 169
Query: 254 VFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+F K +NILI G K +V++A + + + G PD ++YT FI+ C
Sbjct: 170 LFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLC 229
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ LK+M EKGC P V+++ V++ L K K+++EA + M++ C P+
Sbjct: 230 KAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAI 289
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE---ENALKLL 429
+++LI +AG+ K A F++M K+GV P V+TYN ++ C +E + A+ L
Sbjct: 290 SFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLF 349
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
M E PD TY+ L+ + ++ LL M + TY SL+ GL
Sbjct: 350 DAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGL 409
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKML 517
K++ A F M+ KG VP TY +
Sbjct: 410 EKVDEALELFVAMVEKGCVPDTITYGTI 437
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 114/237 (48%), Gaps = 12/237 (5%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M + GF P+ ++Y + C + M + G P V+TY ++H K +
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++EALK+++ +PD Y++LI KA ++ +A I + M + +VP+V+TYN+
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR-----MKVLNFLLTH 466
+++ C + A L+ + P+ TY+ L+ CR+ R +K+ +L
Sbjct: 121 LVNGLCKNGRVDEARMLIV---DKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
++ +V TY L+ GL++ ++ A F ++ G+ P TY + + L K
Sbjct: 178 GYEPEVP----TYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCK 230
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 111/218 (50%), Gaps = 5/218 (2%)
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M++ G P+ ITY ++ L ++++A +YE+M PD Y++L+ K G
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ +A +IF+ K+G VP+V+TYN +I+ C + + A ++LQ+M + PD TY
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI-ESGKLELACSFFEEMISK 505
L+ C+ R+ L+ S + TY++L+ GL E + A F ++ +
Sbjct: 121 LVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQ 177
Query: 506 GIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAKE 542
G P TY +L + L K+ R+ A E + L+ H E
Sbjct: 178 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLE 215
>gi|224114285|ref|XP_002316718.1| predicted protein [Populus trichocarpa]
gi|222859783|gb|EEE97330.1| predicted protein [Populus trichocarpa]
Length = 684
Score = 167 bits (423), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 114/395 (28%), Positives = 188/395 (47%), Gaps = 6/395 (1%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
+D A FF W+ Q Y H P +Y M+DVL K+K C V + +
Sbjct: 61 SDERVALDFFFWSDRQWRYRHDPIVYCVMLDVLSKTK-LCQGARRVLRLMVRRGIQRTPQ 119
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
+M R G+ +A++ M+K G+E + + + LV N +E A + FLE
Sbjct: 120 DFCCVMVSYSRAGKLRNAMQVLTMMQKAGIEPNLLVCNTAIHVLVMANMLEKALR-FLER 178
Query: 259 KDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ + + +N LI G+C +V+DA + + EM +G SPD VSY + C+ +
Sbjct: 179 MQLLGIMPNVVTYNCLIKGYCDLHRVEDAMELISEMPLKGCSPDKVSYYTVMGFLCKNRR 238
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
R+V D +++M++ +TY ++H L K + +EAL+ + + D YS+
Sbjct: 239 IREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKRGFQVDKVGYSA 298
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
++ K GR+ A EI +M +G +P+V+TY +I+ E A K+LQ+M +
Sbjct: 299 IVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQMYKHG 358
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
CKP+ +Y LK C+K ++ + + +A TY+ ++ G GKL AC
Sbjct: 359 CKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGKLSDAC 418
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
EMI KG P +L + L R+G E
Sbjct: 419 DVVREMIGKGFFPTPVEINLLLQSL--CRIGRVDE 451
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 172/344 (50%), Gaps = 4/344 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ L K+++ + +++++M++ T +T++ L + D+A++ R
Sbjct: 226 YYTVMGFLCKNRRIREVMDVIEKMED-TKLLADQVTYNTLIHMLCKHQHADEALQFLREA 284
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+K G + D S ++D+ K ++ A ++ E + CIP + +I+G+ + +
Sbjct: 285 QKRGFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIP-DVVTYTAIINGFSQAGE 343
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V A+K +++M++ G P+ VSYT F++ C++ + + + +K +E+ P+ ITY++
Sbjct: 344 VGQARKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSV 403
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
VMH + ++++A V +M P + L+ L + GRV +A + E+ G
Sbjct: 404 VMHGFRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMG 463
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
N + + T+I C + + E AL LL M PD TY ++ +K R++
Sbjct: 464 CAVNAVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEAT 523
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L M K + TY +++ + G++E + ++M+++
Sbjct: 524 ELTLKMLKKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKMLTR 567
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 160/336 (47%), Gaps = 3/336 (0%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KD 260
T+M L + R + ++ M+ + D + L+ L K + A + E K
Sbjct: 228 TVMGFLCKNRRIREVMDVIEKMEDTKLLADQVTYNTLIHMLCKHQHADEALQFLREAQKR 287
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
+ ++ ++ +CK ++D A++ + EMF +G PDVV+YT I + + + +
Sbjct: 288 GFQVDKVGYSAIVDSYCKEGRMDQAKEIVNEMFTRGCIPDVVTYTAIINGFSQAGEVGQA 347
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
L++M + GCKP+ ++YT + L + +EA ++ + + P+ YS ++
Sbjct: 348 RKMLQQMYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHG 407
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ G++ DA ++ +M +G P + N ++ S C + A K +++ C +
Sbjct: 408 FRREGKLSDACDVVREMIGKGFFPTPVEINLLLQSLCRIGRVDEAKKFMEECLNMGCAVN 467
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
+ ++ C++ ++ LL M+ ++ DA TY +++ L + G++E A
Sbjct: 468 AVNFTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTL 527
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
+M+ KGI P TY+ + + ++G ++ +N L
Sbjct: 528 KMLKKGIDPTPVTYRTVIHRY--GQIGRVEDLLNLL 561
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 169/389 (43%), Gaps = 49/389 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ +VD K + E+V EM G + + T + I+ + G A + +
Sbjct: 296 YSAIVDSYCKEGRMDQAKEIVNEM--FTRGCIPDVVTYTAIINGFSQAGEVGQARKMLQQ 353
Query: 223 MKKYGVEKDTRALSVLMDTLV-KGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRK 281
M K+G + +T + + + L KGNS E + + ++ +++++HG+ + K
Sbjct: 354 MYKHGCKPNTVSYTAFLKGLCQKGNSSEAREMMKASEEQWWTPNAITYSVVMHGFRREGK 413
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE---KGCKPSVIT 338
+ DA ++EM +GF P V ++ CR +VD+ K M+E GC + +
Sbjct: 414 LSDACDVVREMIGKGFFPTPVEINLLLQSLCR---IGRVDEAKKFMEECLNMGCAVNAVN 470
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+T V+H + I AL + + M + PD Y+++I L K GR+++A E+ M
Sbjct: 471 FTTVIHRFCQQDDIEAALSLLDDMYLSNKHPDAVTYTTIIDALGKKGRIEEATELTLKML 530
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET-YAPLLKMCCRKKRM 457
K+G+ P +TY T+I E+ L LL KM L + +C T + +++ C +
Sbjct: 531 KKGIDPTPVTYRTVIHRYGQIGRVEDLLNLLDKM---LTRQECRTAFNQVIEKLCTFGNL 587
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLV---------------------------------- 483
+ + LL + + +DA T L+
Sbjct: 588 EAADKLLGKVLRTASRIDANTCHVLMESYLRKGIPLSAYKVACRMFSRSLIPDLKLCEKV 647
Query: 484 -RGLIESGKLELACSFFEEMISKGIVPYH 511
+ L++ GK E A + F + +G + H
Sbjct: 648 CKKLMQEGKSEEADNLFLRFVERGNISSH 676
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 192/378 (50%), Gaps = 5/378 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N +++VL + K L+ + EM + T++T+++ L R + AV
Sbjct: 164 VFNHLLNVLVEGSKLKLLESVYNEMTG-RGIQPDVVTLNTLIKALCRAHQVRTAVLMLEE 222
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTR 280
M +GV D + LM ++ S+E A +V + + C P + N+LI+G+CK
Sbjct: 223 MSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTV-NVLINGYCKMG 281
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+V+DA +++ GF PD V+Y F+ C+ + M ++G P V TY
Sbjct: 282 RVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYN 341
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
V++ L K +++EA + +M CLPDT+ +++LI LS R+++A ++ ++ +
Sbjct: 342 TVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVK 401
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+V T+N +I++ C + ++L ++M+ C PD TY L+ C ++
Sbjct: 402 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNA 461
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
LL M N TY +++ L + ++E A F++M ++GI T+ L +
Sbjct: 462 LDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDG 521
Query: 521 LEK-KRLGNAKERINKLL 537
L K KR+ +A E I +++
Sbjct: 522 LCKAKRIDDATELIEQMV 539
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 181/369 (49%), Gaps = 9/369 (2%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDD 215
H P++ YNT+++ L K+ + +V +M ++ G + T +T++ L R ++
Sbjct: 333 HDPDVFTYNTVINCLSKNGELDEAKGIVNQM--VDRGCLPDTTTFNTLIVALSSQNRLEE 390
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILI 273
A++ R + G+ D ++L++ L K ++F E K C P +NILI
Sbjct: 391 ALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTP-DEVTYNILI 449
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
C K+ +A + EM G V+Y I+ C++ + ++ +M +G
Sbjct: 450 DHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGIS 509
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
S +T+ ++ L KAK+I++A ++ E+M + P+ Y+S++ K G +K A +I
Sbjct: 510 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADI 569
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
E M G +V+TY T+I+ C + ALKLL+ M +P + Y P+++ R
Sbjct: 570 LETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFR 629
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK-LELACSFFEEMISKGIVPYHS 512
+ ++ L M + DA TY + R L G ++ A F EM++KG +P S
Sbjct: 630 RNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFS 689
Query: 513 TYKMLEEKL 521
+++ML E L
Sbjct: 690 SFRMLAEGL 698
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/406 (25%), Positives = 186/406 (45%), Gaps = 6/406 (1%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
R +D A A + + + +Y +V LG + F LM LV+EM + V
Sbjct: 64 REQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGH-QV 122
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGM---KKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
+ + + R R+DDAV+ +GV+ DT + L++ LV+G+ ++
Sbjct: 123 RAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLE 182
Query: 253 KVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
V+ E I N LI C+ +V A ++EM G +PD ++T ++ +
Sbjct: 183 SVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGF 242
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
E +M E GC P+ +T ++++ K ++ +AL ++ +D PD
Sbjct: 243 IEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQ 302
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y++ + L + G V A ++ + M ++G P+V TYNT+I+ E + A ++ +
Sbjct: 303 VTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQ 362
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M + C PD T+ L+ + R++ L + +S D T+ L+ L + G
Sbjct: 363 MVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 422
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
L FEEM S G P TY +L + L +LGNA + +N++
Sbjct: 423 PHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEM 468
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/338 (26%), Positives = 169/338 (50%), Gaps = 5/338 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T + L + G A++ M + G + D + +++ L K ++ A + +
Sbjct: 304 TYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 363
Query: 259 KD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
D C+P + FN LI ++++A +E+ +G SPDV ++ I C+ D
Sbjct: 364 VDRGCLP-DTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 422
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+EM+ GC P +TY I++ L ++ AL + +M+S+ C T Y++
Sbjct: 423 PHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNT 482
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L K R+++A E+F+ M QG+ + +T+NT+I C ++A +L+++M ++
Sbjct: 483 IIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG 542
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+P+ TY +L C++ +K +L M N +D TY +L+ GL ++G+ ++A
Sbjct: 543 LQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVAL 602
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
M KGI P Y + + L ++ N ++ +N
Sbjct: 603 KLLRGMRIKGIRPTPKAYNPVIQSLFRRN--NLRDALN 638
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 13/198 (6%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFC----LMWELVKEMDELNNGYVSLATMSTIMRRLVRGG 211
G + +NT++D L K+K+ L+ ++VKE + NN T ++I+ + G
Sbjct: 507 GISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNN-----ITYNSILTHYCKQG 561
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIF 269
A + M G E D L++ L K + A K+ + K P + + +
Sbjct: 562 NIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRP-TPKAY 620
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD-FRKVDDTLKEMQ 328
N +I + + DA +EM + G PD ++Y CR ++ D L EM
Sbjct: 621 NPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMV 680
Query: 329 EKGCKPSVITYTIVMHAL 346
KG P ++ ++ L
Sbjct: 681 NKGFMPEFSSFRMLAEGL 698
>gi|413932624|gb|AFW67175.1| hypothetical protein ZEAMMB73_588183 [Zea mays]
Length = 520
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 106/397 (26%), Positives = 191/397 (48%), Gaps = 9/397 (2%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLG---- 172
AL G ++ LV L R + AF FF WA Q GY H P YN ++D+L
Sbjct: 67 ALDALGAELTTPLVADVLHRLRYEEKLAFRFFAWASQQDGYNHEPTTYNDIIDILSGTRY 126
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT 232
KS++F ++ ++ M + V + + I+R A + + +T
Sbjct: 127 KSRQFGVLCNVLDHMKRHGSRSVPVEDLLEILRAYTEKHLTHMRKLAKKRRVRMRTPPET 186
Query: 233 RALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
AL+VL+D K V+ A VF K + +++ ++ L GWC+ R A K ++EM
Sbjct: 187 DALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRARDPKKAMKVLEEM 246
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG---CKPSVITYTIVMHALGKA 349
Q +P+ +Y I +C + + + M+ +G P+ TY+I++ AL KA
Sbjct: 247 IQMKHTPESFTYVAAIISFCSAGLVSEARELFEFMRTEGLTISSPTAKTYSIMIVALAKA 306
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
++ E ++ M+S C+PD + Y LI + G++ A + ++M + G P+++TY
Sbjct: 307 DRMEECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKLDAAYRVLDEMGRAGFPPDIVTY 366
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETY-APLLKMCCRKKRMKVLNFLLTHMF 468
N ++ C+ + ++AL+L ++M E C+P TY ++ + + L+ L M
Sbjct: 367 NCFLNVFCSHRKADDALELCERMIEAHCEPSVHTYNMMMMMFFEMGEAHRALDICL-EMD 425
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
K TY ++ GL + G+ E A + +E+I++
Sbjct: 426 KRRCQRAIDTYEIMIYGLFDCGETEYATALLDEVINR 462
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/375 (20%), Positives = 153/375 (40%), Gaps = 43/375 (11%)
Query: 87 RVLSENHETDVDKISKILSKQYQSP------DKVVEALKGCGVSVSNSLVEQTLRR--FS 138
R +E H T + K++K + ++P + +++A CG+ V ++R
Sbjct: 159 RAYTEKHLTHMRKLAKKRRVRMRTPPETDALNVLLDAFCKCGMVKEAEAVFGRVKRKLLG 218
Query: 139 NDLTPAFGFFTWAKTQ------------TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
N T + FF W + + HTPE + + ++ FC LV E
Sbjct: 219 NAETYSTLFFGWCRARDPKKAMKVLEEMIQMKHTPESFTYVAAIIS----FCSAG-LVSE 273
Query: 187 MDEL-----NNGYV----SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
EL G + T S ++ L + R ++ E M+ G D
Sbjct: 274 ARELFEFMRTEGLTISSPTAKTYSIMIVALAKADRMEECFELLSDMRSCGCMPDVTTYKD 333
Query: 238 LMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L++ + ++ AY+V E + P +N ++ +C RK DDA + + M +
Sbjct: 334 LIEGMCLVGKLDAAYRVLDEMGRAGFPPDIVTYNCFLNVFCSHRKADDALELCERMIEAH 393
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
P V +Y + + + + D EM ++ C+ ++ TY I+++ L + A
Sbjct: 394 CEPSVHTYNMMMMMFFEMGEAHRALDICLEMDKRRCQRAIDTYEIMIYGLFDCGETEYAT 453
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ +++ + D + +++ LS G + + + E M+K YN ++
Sbjct: 454 ALLDEVINRDMKLSYKKFDAIMLRLSDVGNLGAIHRLSEHMRK--------FYNVAMARR 505
Query: 417 CARSEEENALKLLQK 431
A ++++ ++ L +K
Sbjct: 506 FAITQKKKSIGLRRK 520
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P+T + L+ K G VK+A +F +K++ ++ N TY+T+ C + + A+K+
Sbjct: 184 PETDALNVLLDAFCKCGMVKEAEAVFGRVKRK-LLGNAETYSTLFFGWCRARDPKKAMKV 242
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD---AGTYASLVRG 485
L++M + P+ TY + C + L M +++ A TY+ ++
Sbjct: 243 LEEMIQMKHTPESFTYVAAIISFCSAGLVSEARELFEFMRTEGLTISSPTAKTYSIMIVA 302
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L ++ ++E +M S G +P +TYK L E +
Sbjct: 303 LAKADRMEECFELLSDMRSCGCMPDVTTYKDLIEGM 338
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 167 bits (422), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 124/487 (25%), Positives = 225/487 (46%), Gaps = 51/487 (10%)
Query: 105 SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT-QTGYMHTPEM 163
+KQY+ + + ++ G++ S + + F ++ F T K + GY +
Sbjct: 101 TKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVI 160
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV------ 217
+NT+++ L + ELV M E+ + +L T++T++ L G+ DAV
Sbjct: 161 FNTLLNGLCLECRVSEALELVDRMVEMGH-KPTLITLNTLVNGLCLNGKVSDAVVLIDRM 219
Query: 218 -----------------------------EAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
E R M++ ++ D S+++D L K S+
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSL 279
Query: 249 EHAYKVFLEFK------DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
++A+ +F E + D I +N LI G+C + DD K +++M ++ SP+VV
Sbjct: 280 DNAFNLFNEMEIKGFKADIIT-----YNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVV 334
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+++ I+ + +E R+ D LKEM ++G P+ ITY ++ K ++ EA+++ + M
Sbjct: 335 TFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLM 394
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
S C PD ++ LI KA R+ D E+F +M +GV+ N +TYNT++ C +
Sbjct: 395 ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKL 454
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
E A KL Q+M +PD +Y LL C ++ + + K+ + +D G Y +
Sbjct: 455 EVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMII 514
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKLL--AH 539
+ G+ + K++ A F + KG+ Y M+ E K L A K+ H
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGH 574
Query: 540 AKEQKTF 546
A ++ T+
Sbjct: 575 APDELTY 581
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 179/366 (48%), Gaps = 2/366 (0%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+TG+ Y +++V+ KS + L EL+++M+E N + S I+ L + G
Sbjct: 220 VETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEE-RNIKLDAVKYSIIIDGLCKDGS 278
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNI 271
D+A F M+ G + D + L+ + K+ + K I + F++
Sbjct: 279 LDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSV 338
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI + K K+ +A + +KEM Q+G +P+ ++Y I+ +C+E + + M KG
Sbjct: 339 LIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKG 398
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C P ++T+ I+++ KA +I++ L+++ +M + +T Y++L+ ++G+++ A
Sbjct: 399 CDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAK 458
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++F++M + V P++++Y ++ C E E AL++ K+E+ + D Y ++
Sbjct: 459 KLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGM 518
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C ++ L + V +DA Y ++ L L A F +M +G P
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDE 578
Query: 512 STYKML 517
TY +L
Sbjct: 579 LTYNIL 584
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 180/398 (45%), Gaps = 45/398 (11%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N + + K+K++ L+ L K+M+ + S+ T+S ++ R + A +
Sbjct: 91 FNRLFSAIAKTKQYELVLALCKQMESKGIAH-SIYTLSIMINCFCRCRKLSYAFSTMGKI 149
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQ----IFNILIHGWCK 278
K G E DT V+ +TL+ G +E LE D + + + N L++G C
Sbjct: 150 MKLGYEPDT----VIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCL 205
Query: 279 TRKVDDAQKAMKEMFQQGFSP-----------------------------------DVVS 303
KV DA + M + GF P D V
Sbjct: 206 NGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK 265
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y+ I+ C++ + EM+ KG K +ITY ++ A + ++ K+ M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
P+ +S LI K G++++A+++ ++M ++G+ PN +TYN++I C + E
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A++++ M C PD T+ L+ C+ R+ L M V + TY +LV
Sbjct: 386 EAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLV 445
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+G +SGKLE+A F+EM+S+ + P +YK+L + L
Sbjct: 446 QGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGL 483
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 167/367 (45%), Gaps = 8/367 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++D L K + L EM E+ + T +T++ GR+DD + R M
Sbjct: 266 YSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDM 324
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
K + + SVL+D+ VK + A ++ E + I ++ +N LI G+CK ++
Sbjct: 325 IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRL 384
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSVITY 339
++A + + M +G PD++++ I YC+ ++DD L +EM +G + +TY
Sbjct: 385 EEAIQMVDLMISKGCDPDIMTFNILINGYCKAN---RIDDGLELFREMSLRGVIANTVTY 441
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ ++ ++ A K++++M S PD Y L+ L G ++ A EIF ++K
Sbjct: 442 NTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEK 501
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+ ++ Y +I C S+ ++A L + K D Y ++ CRK +
Sbjct: 502 SKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK 561
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ L M + + D TY L+R + A EEM S G ST KM+
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Query: 520 KLEKKRL 526
L L
Sbjct: 622 MLSSGEL 628
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 118/237 (49%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA ++M Q P V+ + + K + V K+M+ KG S+ T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + ++++ A K+ PDT +++L+ L RV +A E+ + M +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P ++T NT+++ C + +A+ L+ +M E +P+ TY P+L + C+ + +
Sbjct: 188 GHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALA 247
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + ++ +DA Y+ ++ GL + G L+ A + F EM KG TY L
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTL 304
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 128/281 (45%), Gaps = 1/281 (0%)
Query: 245 GNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
G + A +F + PL + I FN L KT++ + K+M +G + + +
Sbjct: 66 GIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYT 125
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
+ I +CR + T+ ++ + G +P + + +++ L +++EAL++ ++M
Sbjct: 126 LSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMV 185
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
P ++L+ L G+V DA + + M + G PN +TY +++ C +
Sbjct: 186 EMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTA 245
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A++LL+KMEE K D Y+ ++ C+ + L M D TY +L+
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLI 305
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
G +G+ + +MI + I P T+ +L + K+
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKE 346
>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
Length = 746
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 118/407 (28%), Positives = 201/407 (49%), Gaps = 19/407 (4%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
N L P FG A T +YN +++VL + K L+ + EM E +
Sbjct: 138 NQLDPLFGI--QADTV--------VYNHLLNVLVEGSKMKLLETVYSEMGE-RGIKPDVV 186
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV---F 255
T +T+M+ L R + AV M GV D + LM V+ S++ A +V
Sbjct: 187 TFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARM 246
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
LE C P + N+LI+G+CK +V+DA +++ GF PD ++Y F+ C+
Sbjct: 247 LEMG-CSPTKVTV-NVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNG 304
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ M ++G P V TY IV++ L K Q+ EA + +M CLPD + ++
Sbjct: 305 HVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFN 364
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI L R+++A ++ + +G+ P+V T+N +I++ C + + AL+L ++M+
Sbjct: 365 TLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSS 424
Query: 436 LCKPDCETYAPLL-KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C PD TY L+ +C K K L+ LL M TY +++ GL + ++E
Sbjct: 425 GCTPDEVTYNTLIDNLCSLGKLGKALD-LLKEMESAGCPRSTVTYNTIIDGLCKKMRIEE 483
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHA 540
A F++M +GI T+ L + L K KR+ +A + I+++++
Sbjct: 484 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEG 530
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 122/474 (25%), Positives = 213/474 (44%), Gaps = 15/474 (3%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL 118
+PDE + G+VE + R+ +R+L E + +L Y +V +AL
Sbjct: 217 APDETTFTTLMQGFVEEGSIKAALRVKARML-EMGCSPTKVTVNVLINGYCKLGRVEDAL 275
Query: 119 KGCGVSVSNSLV--EQTLRRFSNDLTPAFGFFTWAKTQTGYM----HTPEM--YNTMVDV 170
++N + T F N L G A M H P++ YN +V+
Sbjct: 276 GYIQQEIANGFEPDQITYNTFVNGLCQN-GHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 334
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
L K+ + ++ +M E + T +T++ L G R ++A++ R + G+
Sbjct: 335 LCKNGQLEEAKGILNQMVE-RGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSP 393
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKA 288
D ++L++ L K + A ++F E K C P +N LI C K+ A
Sbjct: 394 DVYTFNILINALCKVGDPQLALRLFEEMKSSGCTP-DEVTYNTLIDNLCSLGKLGKALDL 452
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+KEM G V+Y I+ C++ + ++ +M +G + IT+ ++ L K
Sbjct: 453 LKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCK 512
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
K+I++A ++ +M S+ P+ Y+S++ K G +K A +I + M G +V+T
Sbjct: 513 DKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVT 572
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y T+I+ C + ALKLL+ M + + Y P+++ R+ + L M
Sbjct: 573 YGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMT 632
Query: 469 KNDVSMDAGTYASLVRGLIE-SGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ DA TY + RGL G + A F EM+ KG +P S+++ML E L
Sbjct: 633 EVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEFSSFRMLAEGL 686
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 173/349 (49%), Gaps = 6/349 (1%)
Query: 189 ELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS 247
E+ NG+ T +T + L + G A++ M + G + D +++++ L K
Sbjct: 281 EIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQ 340
Query: 248 VEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
+E A + + + C+P FN LI C ++++A +++ +G SPDV ++
Sbjct: 341 LEEAKGILNQMVERGCLP-DITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFN 399
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I C+ D + +EM+ GC P +TY ++ L ++ +AL + ++M+S
Sbjct: 400 ILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESA 459
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
C T Y+++I L K R+++A E+F+ M QG+ N +T+NT+I C ++A
Sbjct: 460 GCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDA 519
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
+L+ +M + +P+ TY +L C++ +K +L M N +D TY +L+ G
Sbjct: 520 NQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLING 579
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
L ++G+ ++A M KG+ Y + + L ++ N ++ +N
Sbjct: 580 LCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRN--NTRDAMN 626
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 185/409 (45%), Gaps = 6/409 (1%)
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFC-LMWELVKEMDELN 191
T R D A A + + PE+Y ++ LG + LM LV EM
Sbjct: 49 TALREQPDPDAALRMLNAALAREDFAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREG 108
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK--YGVEKDTRALSVLMDTLVKGNSVE 249
+ V + + + + R + DAV+ +G++ DT + L++ LV+G+ ++
Sbjct: 109 H-QVRVGVVHSFLESYARQQLFVDAVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMK 167
Query: 250 HAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
V+ E + I FN L+ C+ +V A ++EM G +PD ++T +
Sbjct: 168 LLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLM 227
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+ + E + M E GC P+ +T ++++ K ++ +AL ++ ++
Sbjct: 228 QGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFE 287
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
PD Y++ + L + G V A ++ + M ++G P+V TYN +++ C + E A +
Sbjct: 288 PDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGI 347
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
L +M E C PD T+ L+ C R++ L + +S D T+ L+ L +
Sbjct: 348 LNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCK 407
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
G +LA FEEM S G P TY L + L +LG A + + ++
Sbjct: 408 VGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEM 456
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 112/396 (28%), Positives = 206/396 (52%), Gaps = 13/396 (3%)
Query: 148 FTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIM 204
F K +G TP + YNT++D L K+ K +EL++ + +++G+V + T + I+
Sbjct: 135 FELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETL--VSSGFVPDVVTYTIIV 192
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCI 262
L + GR D A++ GM K G + LM+ L + V+ A+ +F E KDC
Sbjct: 193 DGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCT 252
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+ + L++G+CK+ + +AQK + + +G +P + Y ++ YC+E ++ +
Sbjct: 253 A-DALAYVSLVNGYCKSSRTKEAQKVVDGI--RG-TPYIDVYNALMDGYCKEGRLDEIPN 308
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
++M +GC P++ TY IVM L K +++EA E M S C+PD Y+ +I L
Sbjct: 309 VFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLF 368
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
KA + K+A ++ + M + G+ P+ +TYNT+++ C ++A+ +L+ M + PD
Sbjct: 369 KASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNV 428
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA-GTYASLVRGLIESGKLELACSFFEE 501
TY L+ + R+ L+ M +N + A TY +++ L + G L+ A +
Sbjct: 429 TYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDH 488
Query: 502 MISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
M G+ TY + ++L K+ RL A ++++
Sbjct: 489 MTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 524
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/381 (27%), Positives = 182/381 (47%), Gaps = 10/381 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++ L K + LV E +++G+V + T S + L + GR D+A E +
Sbjct: 83 YNTLISGLCKQQNVDRAKTLVDEF--VSSGFVPDVVTYSILADGLCKRGRIDEAFELVKE 140
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M G + + L+D L K + E AY++ L +P + I++ G CK
Sbjct: 141 MSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVP-DVVTYTIIVDGLCKEG 199
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++D A K ++ M ++G +P V++YT +E CR + KEM K C + Y
Sbjct: 200 RLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYV 259
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+++ K+ + EA KV + ++ P Y++L+ K GR+ + +FEDM +
Sbjct: 260 SLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACR 316
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G VPN+ TYN ++ C + + A L+ M C PD +Y ++ + + K
Sbjct: 317 GCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEA 376
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+L M + + DA TY +L+ + + + A + MI G+ P + TY L
Sbjct: 377 RQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 436
Query: 521 L-EKKRLGNAKERINKLLAHA 540
L + RLG+A E ++++L +
Sbjct: 437 LSQTNRLGDAYELMHEMLRNG 457
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 126/237 (53%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+NILI G CK K D A + + EM +G +PD V++ ++ C+ F + L M
Sbjct: 13 YNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMA 72
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E+ C+PS TY ++ L K + ++ A + ++ S +PD YS L L K GR+
Sbjct: 73 ERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRID 132
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A E+ ++M G PN++TYNT+I C S+ E A +LL+ + PD TY ++
Sbjct: 133 EAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIV 192
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
C++ R+ ++ M K + TY +L+ GL +G+++ A F+EM+SK
Sbjct: 193 DGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSK 249
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 153/354 (43%), Gaps = 39/354 (11%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+ +M + GR D+ F M G + + +++MD L K V+ A+ FLE
Sbjct: 291 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFP-FLESMH 349
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C+P +NI+I G K K +A++ + +M Q G PD V+Y + +C+E+ F
Sbjct: 350 SAGCVP-DVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERF 408
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT-SFYSS 376
LK M + G P +TY ++ L + ++ +A ++ +M + C+ + Y++
Sbjct: 409 DDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNT 468
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE-- 434
+I L K G +K A + + M GV N +TYN I C + A LL +M+
Sbjct: 469 IIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR 528
Query: 435 ----------DLCKPD---------------------CETYAPLLKMCCRKKRMKVLNFL 463
LCK + T+ L+ + KR+ L
Sbjct: 529 DEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTL 588
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M + S TY ++ L + K++ A F+EM +GIV +Y +L
Sbjct: 589 LELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVL 642
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 109/230 (47%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M ++ +PDV +Y I+ C+ K + L EM ++G P +T+ +M L KA +
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
A + M +C P Y++LI L K V A + ++ G VP+V+TY+
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+ C R + A +L+++M + C P+ TY L+ C+ + + LL + +
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
D TY +V GL + G+L+ A E M+ +G P TY L E L
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGL 230
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 137/314 (43%), Gaps = 40/314 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFR 221
YN ++D L K+ K E + +D++ + T +T+M + + R+DDAV +
Sbjct: 360 YNIIIDGLFKASK---PKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILK 416
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKT 279
M K GV+ D + L+ L + N + AY++ E C+ + +N +I CK
Sbjct: 417 NMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKE 476
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE---------- 329
+ A M M G + V+Y FI+ C+E + L EM
Sbjct: 477 GCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTV 536
Query: 330 -----------------------KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
KG + T+ +++ A K K+++EAL + E M
Sbjct: 537 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRG 596
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C P Y+ +I L K +V A E+F++M +G+V + ++Y +I C + + AL
Sbjct: 597 CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEAL 656
Query: 427 KLLQKMEEDLCKPD 440
++L++M C+ D
Sbjct: 657 QVLEEMASSDCEID 670
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 136/273 (49%), Gaps = 9/273 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFR 221
YNT++ L ++ + +EL+ EM L NG V + T +TI+ RL + G A+
Sbjct: 430 YNTLISGLSQTNRLGDAYELMHEM--LRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMD 487
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTR 280
M +GVE +T ++ +D L K ++ A + E L ++ + +I G CK
Sbjct: 488 HMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMD---TLRDEVSYTTVIIGLCKAE 544
Query: 281 KVDDAQKAMKEMFQ-QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++D A K +EM +G ++ I+ + + K + L+ M ++GC PSVITY
Sbjct: 545 QLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITY 604
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+V+ L K ++++A +++++M + + Y+ LI+ L GR K+A ++ E+M
Sbjct: 605 NMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMAS 664
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
+ L + + + E A +LL++M
Sbjct: 665 SDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 108/212 (50%), Gaps = 1/212 (0%)
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M E+ P V TY I++ L KA + ++A ++ +M PDT ++S++ L KAG+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ A+ + M ++ P+ TYNT+IS C + + A L+ + PD TY+
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L C++ R+ L+ M N + + TY +L+ GL ++ K E A E ++S G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 507 IVPYHSTYKMLEEKLEKK-RLGNAKERINKLL 537
VP TY ++ + L K+ RL A + + +L
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGML 212
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 165/402 (41%), Gaps = 62/402 (15%)
Query: 152 KTQTGYMHTP--EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA---------TM 200
K G TP ++YN ++D K + +DE+ N + +A T
Sbjct: 276 KVVDGIRGTPYIDVYNALMDGYCKEGR----------LDEIPNVFEDMACRGCVPNIKTY 325
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FK 259
+ +M L + G+ D+A M G D + ++++D L K + + A +V + +
Sbjct: 326 NIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQ 385
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI----------- 308
IP + +N L+ +CK + DDA +K M + G PD V+Y I
Sbjct: 386 AGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGD 445
Query: 309 -------------------------EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+ C+E ++ + M G + + +TY I +
Sbjct: 446 AYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFI 505
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK-QGV 402
L K +++EA + +M D L D Y+++I L KA ++ A+++ +M +G+
Sbjct: 506 DRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGL 562
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
T+N +I + + AL LL+ M + C P TY ++ C+ ++
Sbjct: 563 CITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWE 622
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L M + + +Y L+ GL G+ + A EEM S
Sbjct: 623 LFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMAS 664
>gi|449491189|ref|XP_004158824.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Cucumis sativus]
Length = 450
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 104/383 (27%), Positives = 196/383 (51%), Gaps = 8/383 (2%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE 189
V + L + ND ++ FF W +++ + HT E YN M+D+LGK +F L W L+ M +
Sbjct: 50 VREALDSYCNDWKRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQ 109
Query: 190 LNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE 249
+ AT + +R +A+ A+ ++++ + +D + L+D L + V+
Sbjct: 110 SPSASPDHATFRILFKRYALAHLVSEAIAAYERLREFKL-RDETSFCNLIDALCESRHVD 168
Query: 250 HAYKVFLEFK---DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
A ++ DC S++I N+++ GW K + +EM ++G D+ SY+
Sbjct: 169 EAQELCFGKNRKLDCDS-STKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSI 227
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
+++ C+ K KEM++KG K V+ Y V+HA+G ++ ++ A +V+ +MK
Sbjct: 228 YMDIQCKSGKPWKAVKLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMG 287
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C P+ +++I + + GR KDA+ + + M K+ PNV+TY+ S + + L
Sbjct: 288 CKPNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSL---EKPKEIL 344
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
L +M + P +TY LL+ R ++ + + M + S + Y +L+ L
Sbjct: 345 VLFDRMIKYGVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDAL 404
Query: 487 IESGKLELACSFFEEMISKGIVP 509
+E G +++A + EEM++KG+ P
Sbjct: 405 VEKGMIDMARKYDEEMVAKGLSP 427
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 33/237 (13%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-C 261
I+R ++ G + + + M K GV KD + S+ MD K A K++ E K
Sbjct: 193 ILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKG 252
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ L +N +IH + VD A + EM + G P+VV+ I+ +C F+
Sbjct: 253 MKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRFKDAH 312
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQI----------------------------- 352
L +M ++ C+P+VITY +L K K+I
Sbjct: 313 MMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVMLLRKFGRW 372
Query: 353 ---NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
V+ KM+ C P+ Y++LI L + G + A + E+M +G+ P +
Sbjct: 373 GFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGLSPKL 429
>gi|297843042|ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
gi|297335244|gb|EFH65661.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
Length = 490
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 230/456 (50%), Gaps = 11/456 (2%)
Query: 86 SRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRR--FSN-DLT 142
++V E + D + + ++++ ++ E+L G+ +S L+++ L+R FS+ +
Sbjct: 30 AKVPVEEEDVDAETVFRMINGS-NLQGELKESLSSSGIHLSKDLIDRVLKRVRFSHGNPI 88
Query: 143 PAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST 202
F+ +A + G+ H+ +TM+ +LG+++KF +WE++ E + +S TM
Sbjct: 89 QTLEFYRYAGARRGFYHSSFSLDTMLYILGRNRKFDQIWEILIETKRKDRSLISPRTMQV 148
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEK-DTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
++ R+ + VE+F K+ + DT + L+ TL + S+ A V+ K
Sbjct: 149 VLGRVAKLCSVRQTVESFWKFKRLVPDFFDTACFNALLRTLCQEKSMTDARNVYHSLKHQ 208
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
Q FNIL+ GW + + + + MK +G PDVV+Y I+ YC++++ K
Sbjct: 209 FQPDLQTFNILLSGWKSSEEAEAFFEEMK---GKGLKPDVVTYNSLIDVYCKDREIEKAY 265
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ +M+E+ P VITYT ++ LG Q ++A +V ++MK C PD + Y++ I
Sbjct: 266 KLIDKMREEDETPDVITYTTIIGGLGLIGQPDKAREVLKEMKEYGCYPDVAAYNAAIRNY 325
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
A R+ DA+++ ++M K+G+ PN TYN ++ + +L ++M + C P+
Sbjct: 326 CIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYERMLGNGCLPNT 385
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
++ L+KM R +++ + L M + L+ L + K+E A E
Sbjct: 386 QSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLE 445
Query: 502 MISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
M+ KG P + ++K ++ +E L N + +N L+
Sbjct: 446 MVEKGHRPSNVSFKRIKLLME---LANKHDEVNNLI 478
Score = 42.7 bits (99), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 99/236 (41%), Gaps = 39/236 (16%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+++DV K ++ ++L+ +M E + + T +TI+ L G+ D A E + M
Sbjct: 248 YNSLIDVYCKDREIEKAYKLIDKMRE-EDETPDVITYTTIIGGLGLIGQPDKAREVLKEM 306
Query: 224 KKYGVEKDTRALSV----------------LMDTLVKGNSVEHA--YKVFLEF------- 258
K+YG D A + L+D +VK +A Y +F
Sbjct: 307 KEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLSLANDL 366
Query: 259 ------------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
C+P ++Q LI + + KVD A + ++M +GF +
Sbjct: 367 GRSWELYERMLGNGCLP-NTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSLVSDV 425
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
++ C + + L EM EKG +PS +++ + + A + +E + +KM
Sbjct: 426 LLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNLIQKM 481
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/372 (29%), Positives = 192/372 (51%), Gaps = 19/372 (5%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMST 202
A FF WA Q GY H YN ++D+L KS ++ K++ L++G +L T
Sbjct: 10 AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDL--LHSGCSPNLVTFKI 67
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
++R + G+ A+E R + ++ V D +VL+ L K + + A K+F +
Sbjct: 68 LIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENME--- 124
Query: 263 PLSSQI------FNILIHGWCKTRKVDDAQKAMKEMFQQGF--SPDVVSYTCFIEHYCRE 314
SS++ +N +I G CK+ ++ A++ ++EM ++G +PD+V+Y I + R
Sbjct: 125 --SSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
R+ ++M+ G P V+T I++ + K + EAL++ + MK +PD Y
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+S+I L AG+V +A EI + M P+++T+NT++ C AL++L++M
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+ PD TY L+ CR +++V +LL + + D Y SLV GL +SG++E
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 359
Query: 495 ACSFFEEMISKG 506
A +EM +G
Sbjct: 360 AHKLVKEMSVRG 371
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 174/358 (48%), Gaps = 7/358 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+++ L + K E++K M + L T +T++ + G A+E M
Sbjct: 242 YNSIIHALCVAGKVVEAAEILKTM----SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEM 297
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ + D ++L++ L + V+ A+ + E + IP + L+ G CK+ +
Sbjct: 298 CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIP-DVIAYTSLVDGLCKSGE 356
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+++A K +KEM +G VV Y+ + YCR + K + L EM P + TY I
Sbjct: 357 IEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNI 416
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ L K I++A+ + + + +PD Y++LI L KA RV++A ++ ++M +G
Sbjct: 417 VLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRG 476
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PN +T +++ C ++A L+ +M P+ Y L+ C+ RM
Sbjct: 477 CFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDAC 536
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+L M V++D Y L+ + G++ A + ++EM+++G +P ST K LEE
Sbjct: 537 MVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEE 594
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 170/406 (41%), Gaps = 50/406 (12%)
Query: 161 PEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS---LATMSTIMRRLVRGGRYDD 215
PE+ YNT++ L KS EL++EM + G S + T +T++ R R +
Sbjct: 130 PEIVTYNTVISGLCKSGNLEKARELLEEM--IRKGGKSAPDIVTYNTLINAFYRASRIRE 187
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI------- 268
A MK G+ D ++L+ + K VE A ++ K P+ I
Sbjct: 188 ACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIH 247
Query: 269 --------------------------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
FN L+ G+CK + A + ++EM ++ PDV+
Sbjct: 248 ALCVAGKVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVI 307
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+YT + CR + L+E+ +G P VI YT ++ L K+ +I EA K+ ++M
Sbjct: 308 TYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEM 367
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
C YSSL+ +AG V A EI +M +VP + TYN ++
Sbjct: 368 SVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSI 427
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM-----FKNDVSMDAG 477
A+ L+ + PD TY L+ C+ R++ L M F NDV
Sbjct: 428 SKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDV----- 482
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
T S+V GL G+++ A S EM K P Y L + L K
Sbjct: 483 TLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCK 528
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 103/230 (44%), Gaps = 2/230 (0%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q G+ DV SY ++ + + K++ GC P+++T+ I++ KA Q
Sbjct: 20 QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
AL+ + PD ++ LI L K G A ++FE+M+ V P ++TYNT+I
Sbjct: 80 RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVI 139
Query: 414 SSACARSEEENALKLLQKMEEDLCK--PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
S C E A +LL++M K PD TY L+ R R++ M
Sbjct: 140 SGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAG 199
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
++ D T LV G+ + G +E A + M G VP TY + L
Sbjct: 200 INPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHAL 249
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 4/211 (1%)
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++ G K V +Y ++ L K+ KVY+ + C P+ + LI KAG+
Sbjct: 19 EQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A E + + V P+V +N +I + A+KL + ME KP+ TY +
Sbjct: 79 MRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTV 138
Query: 448 LKMCCRKKRMKVLNFLLTHMFK--NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
+ C+ ++ LL M + + D TY +L+ + ++ AC+F E+M +
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAA 198
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
GI P T +L + K G+ +E + L
Sbjct: 199 GINPDVLTCNILVSGICKD--GDVEEALEIL 227
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 2/146 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY+ YNT++D L K+ + +L EM + + T+ +++ L R GR DD
Sbjct: 441 GYVPDVVTYNTLIDGLCKANRVREACDLADEMAS-RGCFPNDVTLGSVVFGLCRVGRVDD 499
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIH 274
A M + + + L+D L K + ++ A V + + L + LI
Sbjct: 500 AWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIV 559
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPD 300
+V +A EM +GF PD
Sbjct: 560 SMSHGGRVAEAMAMYDEMVARGFLPD 585
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 185/381 (48%), Gaps = 6/381 (1%)
Query: 125 VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV 184
V S V LR T A FF WA Q G+ H YN ++++L K + + +
Sbjct: 84 VLGSHVAAVLRSLKVTGT-AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIH 142
Query: 185 KEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
+EM L G + + + ++R R R DDAV F MK+ + D +L+D L
Sbjct: 143 EEM--LKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLC 200
Query: 244 KGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
K E A++VF E +P + ++ K ++V +A++ +M + GF PD
Sbjct: 201 KAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDA 260
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
++Y I+ + ++ L M K C P+ +TY I++++L KA + A +++
Sbjct: 261 IAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRV 320
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M + P++ Y+SLI +K+GR+K+A +F++M + G P+V+T+ MI C
Sbjct: 321 MAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGN 380
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
E A K ++M CKP+ TY +++ + R+ ++ M + D+ TY
Sbjct: 381 FEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYIC 440
Query: 482 LVRGLIESGKLELACSFFEEM 502
L+ G + G+L+ A +E+
Sbjct: 441 LLDGFCKLGRLDEAAQLLDEL 461
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 186/425 (43%), Gaps = 81/425 (19%)
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDD 215
+HT + +VD L K+ +E+ EM + G+V A + ++R L++ R +
Sbjct: 189 LHT---FLILVDCLCKAGMDEKAFEVFHEM--MAMGFVPPDRALHTAMVRTLLKAKRVKE 243
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPL--------- 264
A E F M+K G D A + ++D L K + A KV + K C+P
Sbjct: 244 AREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVN 303
Query: 265 -------------------------SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
+S I+ LIHG+ K+ ++ +A EM + G+ P
Sbjct: 304 SLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRP 363
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
DV+++T I+ C+ +F + + +EM GCKP+V+TYT ++ L K ++ A ++
Sbjct: 364 DVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIM 423
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+ M + C PD+ Y L+ K GR+ +A ++ +++ K PN+ Y+++++ C
Sbjct: 424 KGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDG 483
Query: 420 SEEENAL------------------------------------KLLQKMEEDLCKPDCET 443
E L ++ Q+M + CKPD T
Sbjct: 484 GSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATT 543
Query: 444 YAPLLKMCCRKKRMKV-LNFLLTH-MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
Y L+ CR + +V F L H + K DA TY L GL + G+++ A EE
Sbjct: 544 YNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEE 603
Query: 502 MISKG 506
S+G
Sbjct: 604 ASSRG 608
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 186/396 (46%), Gaps = 14/396 (3%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRY 213
+G+ +Y +++ KS + L EM E GY + T + ++ L + G +
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE--AGYRPDVITHTVMIDGLCKSGNF 381
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNI 271
+ A ++F M + G + + + ++ L K V +A+++ + C P S +
Sbjct: 382 EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFP-DSVTYIC 440
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+ G+CK ++D+A + + E+ + SP++ Y+ + C K D L E +
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAA 500
Query: 332 CK---PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL--SKAGR 386
+ P + IV L K +++EA +++++M S+ C PD + Y+ LI L S+ R
Sbjct: 501 AETLDPGLCCSIIV--GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENR 558
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
V+ A + D++K G +P+ +TY + C E + A+K+L++ D Y
Sbjct: 559 VERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTA 618
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L C + ++ L M + + DA Y ++ GLI+ KLE AC FF+EMI KG
Sbjct: 619 LCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKG 678
Query: 507 IVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAK 541
P +TY L + L + A R +LA +
Sbjct: 679 QKPTVATYTALVQALCHAGNVDEAFHRFESMLARGE 714
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 168/353 (47%), Gaps = 7/353 (1%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFR-GMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
+G V + ++ ++R L G A+ FR ++ G + D + LM+ LV +
Sbjct: 81 HGQVLGSHVAAVLRSLKVTG---TAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQ 137
Query: 251 AYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
Y + E K I ++ FNILI + +TR+ DDA + M ++ PD+ ++ ++
Sbjct: 138 CYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVD 197
Query: 310 HYCREKDFRKVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
C+ K + EM G P +T ++ L KAK++ EA +V+ +M+
Sbjct: 198 CLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFP 257
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
PD Y+++I L+KAG ++A ++ ++M + VP +TY +++S C E A +L
Sbjct: 258 PDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEEL 317
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+ M +P+ Y L+ + RMK L M + D T+ ++ GL +
Sbjct: 318 FRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCK 377
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHA 540
SG E A FEEM+ G P TY + + L K R+ NA + ++AH
Sbjct: 378 SGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/448 (23%), Positives = 180/448 (40%), Gaps = 80/448 (17%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRG 210
+ GY + M+D L KS F + K +E+ G ++ T +TI++ L +
Sbjct: 357 VEAGYRPDVITHTVMIDGLCKSGNF---EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKI 413
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-----IPLS 265
GR +A +GM +G D+ L+D K ++ A ++ E C + L
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473
Query: 266 SQIFNIL--------------------------------IHGWCKTRKVDDAQKAMKEMF 293
S + N L I G CKT ++D+A + + M
Sbjct: 474 SSLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMV 533
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFR--KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
+G PD +Y I CR ++ R + L ++++ G P +TYT + L K +
Sbjct: 534 SEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGE 593
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++ A+K+ E+ S D Y++L L G+V A +F++M +QG P+ Y
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCC 653
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK------------- 458
+I+ + E+A K +M KP TY L++ C +
Sbjct: 654 IINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARG 713
Query: 459 ------VLNFLLTHMFKNDVSMDAG-----------------TYASLVRGLIESGKLELA 495
++ L H F + +DA T ASL GL+ SGK E A
Sbjct: 714 ELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKA 773
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+EM + G P+ +T+ + + L K
Sbjct: 774 QELLQEMAAGGSPPHAATFTAILDGLRK 801
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 7/185 (3%)
Query: 179 LMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVL 238
L E+V++ G A I+ L++ + +DA + F M G + + L
Sbjct: 635 LFQEMVRQ-----GGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTAL 689
Query: 239 MDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
+ L +V+ A+ F + + + S I++ LIHG+CK KVD A K ++M +G
Sbjct: 690 VQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRG 749
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
P V+ + R K + L+EM G P T+T ++ L K+ + + L
Sbjct: 750 NVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLL 809
Query: 357 KVYEK 361
K+ ++
Sbjct: 810 KLVQE 814
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/421 (27%), Positives = 189/421 (44%), Gaps = 44/421 (10%)
Query: 124 SVSNSLVEQTLR-----RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFC 178
SVS+++V + + R FF WA + H+PE Y M+D+ GK+
Sbjct: 104 SVSSAIVRRVIEKCGGVRHGIPFPQTLAFFNWATNLEEFGHSPEPYMEMIDLAGKA---- 159
Query: 179 LMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVL 238
G +AV AF M+ YG + D A SV+
Sbjct: 160 --------------------------------GLAAEAVHAFNRMEDYGCKPDKIAFSVV 187
Query: 239 MDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
+ +L K A F KD ++ L+HGWC+ + +A++ EM G
Sbjct: 188 ISSLSKKRRAIEAQSFFDSLKDRFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQ 247
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P+V +Y+ I+ CR + D EM + GC P+ IT+ +M KA + + L+V
Sbjct: 248 PNVYTYSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQV 307
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
Y +MK C PD Y+ LI + +++A +I +KK G N ++N +
Sbjct: 308 YNQMKRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKK-GCNLNASSFNPIFGCISK 366
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ +A ++ KM++ C+P+ TY L++M KK ++ L M +N++ +A T
Sbjct: 367 LGDVNSAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANT 426
Query: 479 YASLVRGLIESGKLELACSFFEEMI-SKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
Y L+ G A SFF+EMI K + P Y+M+ ++L K +L +E + K+
Sbjct: 427 YRVLISTFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKM 486
Query: 537 L 537
+
Sbjct: 487 V 487
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 111/241 (46%), Gaps = 2/241 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++D L +S + ++ EM ++ ++ T + +MR V+ GR + ++ + M
Sbjct: 253 YSIVIDALCRSGQITRAHDVFSEMIDVGCDPNAI-TFNNLMRVHVKAGRTEKVLQVYNQM 311
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
K+ G D + L+++ + +++E A K+ K L++ FN + K V+
Sbjct: 312 KRLGCPPDAITYNFLIESHCRDDNLEEAVKILNSVKKGCNLNASSFNPIFGCISKLGDVN 371
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A + +M P+ V+Y + + +K V KEM E +P+ TY +++
Sbjct: 372 SAHRMFAKMKDLKCRPNTVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLI 431
Query: 344 HALGKAKQINEALKVYEKMKSDDCL-PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
N A +++M + CL P Y ++ L KAG++K E+ E M +G
Sbjct: 432 STFCGIGHWNNAYSFFKEMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGF 491
Query: 403 V 403
V
Sbjct: 492 V 492
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 183/392 (46%), Gaps = 3/392 (0%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKK 176
AL + ++V L RF + P++ FF WA G+ HT Y M+ +LGK+++
Sbjct: 182 ALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATASGGFTHTTITYCKMLLILGKTRQ 241
Query: 177 FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALS 236
F M L++EM + G +S+ ++ G +AV F M+K G + + +
Sbjct: 242 FESMVALLQEMGKA--GTLSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFN 299
Query: 237 VLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L+ L A +VF + + + L+ WC R + +A + EM ++G
Sbjct: 300 CLLVALANEGLGREARQVFDKMLGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKG 359
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
PDVV + IE R + + + M+ KG P+V TYT+++ K +++ A+
Sbjct: 360 MKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDMAM 419
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ +E+M+ C PD + Y+ L+ A R+ + E+M ++G P+ TYN +I
Sbjct: 420 ECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIKLL 479
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN-FLLTHMFKNDVSMD 475
R ++A ++ +KM + P TY ++K R + + M + + D
Sbjct: 480 TNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGICPD 539
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+Y + G I G+ E A + EEMI+KG+
Sbjct: 540 VNSYTVFISGHIRHGRPEEAYKYIEEMINKGM 571
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 129/276 (46%), Gaps = 1/276 (0%)
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
L K E + E LS F + I + ++ +A + M + GF V
Sbjct: 236 LGKTRQFESMVALLQEMGKAGTLSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGV 295
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
S+ C + E R+ +M + P + +YT +M A A+ + EA +V+ +
Sbjct: 296 ESFNCLLVALANEGLGREARQVFDKMLGQ-YSPDLRSYTALMLAWCNARNLVEAGRVWNE 354
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M PD ++++I L + R +A ++FE MK +G PNV TY +I + C R +
Sbjct: 355 MLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYTMLICNHCKRGK 414
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
+ A++ ++M+E C+PD TY LL KRM + +L M + DA TY +
Sbjct: 415 MDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNA 474
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L++ L + A +++MI KG+ P TY M+
Sbjct: 475 LIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMM 510
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/265 (23%), Positives = 123/265 (46%), Gaps = 4/265 (1%)
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+LI G KTR+ + ++EM + G + + ++ I+ + + + + M++
Sbjct: 233 LLILG--KTRQFESMVALLQEMGKAG-TLSMDAFKVAIKSFAAAGEIKNAVGVFELMRKN 289
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G V ++ ++ AL EA +V++KM PD Y++L+ A + +A
Sbjct: 290 GFDDGVESFNCLLVALANEGLGREARQVFDKMLGQYS-PDLRSYTALMLAWCNARNLVEA 348
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
++ +M ++G+ P+V+ +NTMI + A+K+ + M+ P+ TY L+
Sbjct: 349 GRVWNEMLEKGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYTMLICN 408
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C++ +M + M + D TY L+ G + +++ + EEM KG P
Sbjct: 409 HCKRGKMDMAMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPD 468
Query: 511 HSTYKMLEEKLEKKRLGNAKERINK 535
TY L + L +++ + RI K
Sbjct: 469 ARTYNALIKLLTNRKMPDDAARIYK 493
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 116/317 (36%), Gaps = 40/317 (12%)
Query: 53 KFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPD 112
K SPD + W + L E R+ + +L + + DV
Sbjct: 320 KMLGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMKPDV--------------- 364
Query: 113 KVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLG 172
V N+++E LR A F K + G Y ++
Sbjct: 365 -----------VVHNTMIEGLLR--GQRQHEAVKMFELMKAK-GPPPNVWTYTMLICNHC 410
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT 232
K K + E +EM E +AT + ++ R D M + G D
Sbjct: 411 KRGKMDMAMECFEEMQEARC-QPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDA 469
Query: 233 RALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM-- 289
R + L+ L + A +++ + K + + +N+++ K+ + D AM
Sbjct: 470 RTYNALIKLLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMM----KSYFLGDRNYAMGC 525
Query: 290 ---KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
+EM ++G PDV SYT FI + R + ++EM KG K I L
Sbjct: 526 AVWEEMHRRGICPDVNSYTVFISGHIRHGRPEEAYKYIEEMINKGMKAPQIDCNKFAADL 585
Query: 347 GKAKQINEALKVYEKMK 363
KA +++ ++ +K+K
Sbjct: 586 SKAGKLDMLYELAQKVK 602
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 108/382 (28%), Positives = 191/382 (50%), Gaps = 5/382 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+ + K K++ + L +MD + ++ +++ ++ L R D +V M
Sbjct: 96 FGKFLGSFAKKKQYSTVVSLCNQMDLFRVTH-NVYSLNILINCLCRLNHVDFSVSVLGKM 154
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
K G+ D + L++ L ++ A ++F E K + + +I+G CKT
Sbjct: 155 FKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNT 214
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A K+M Q G P+VV+Y+ I+ C+++ + L EM E+G P+V TY +
Sbjct: 215 SMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSI 274
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+H Q+NEA +++++M D +P+T ++ L+ L K G V +A +FE M ++GV
Sbjct: 275 VHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGV 334
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P++ TYN ++ C + A K+ + M C P +Y L+ C+ +RM
Sbjct: 335 EPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKS 394
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
LL M+ ++ D TY++L++GL + G+ + A + F+EM S G P TY +L +
Sbjct: 395 LLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFC 454
Query: 523 KKRLGNAKERINKLLAHAKEQK 544
K G+ E + KLL KE+K
Sbjct: 455 KH--GHLDEAL-KLLKSMKEKK 473
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 98/385 (25%), Positives = 194/385 (50%), Gaps = 7/385 (1%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
H P + Y T+++ L K+ + ++ K+M++ N ++ T STI+ L + +DA
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQ-NGCKPNVVTYSTIIDSLCKDRLVNDA 252
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIH 274
+E M + G+ + + ++ + A ++F E +D +P ++ F IL+
Sbjct: 253 MEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMP-NTVTFTILVD 311
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G CK V +A+ + M ++G PD+ +Y ++ YC ++ + + M KGC P
Sbjct: 312 GLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAP 371
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+Y I+++ K+++++EA + +M PDT YS+L+ L + GR K+A +F
Sbjct: 372 GAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLF 431
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M G PN++TY ++ C + ALKLL+ M+E +P+ Y L++
Sbjct: 432 KEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIA 491
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+++V L + +F + D TY +++GL++ G + A F +M G +P +Y
Sbjct: 492 GKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSY 551
Query: 515 K-MLEEKLEKKRLGNAKERINKLLA 538
M++ L+ + A I++++
Sbjct: 552 NVMIQGFLQNQDSSTAIRLIDEMVG 576
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 180/370 (48%), Gaps = 10/370 (2%)
Query: 164 YNTMVDVL---GKSKKFC-LMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
+N +++ L GK K+ L E+VK E N + + +T++ L + G AV+
Sbjct: 166 FNALINGLCNEGKIKEAVELFNEMVKRGHEPN-----VISYTTVINGLCKTGNTSMAVDV 220
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCK 278
F+ M++ G + + S ++D+L K V A + E + IP + +N ++HG+C
Sbjct: 221 FKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCN 280
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
++++A + KEM + P+ V++T ++ C+E + + M EKG +P + T
Sbjct: 281 LGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDIST 340
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y +M + +NEA KV+E M C P Y+ LI K+ R+ +A + +M
Sbjct: 341 YNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMY 400
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ + P+ +TY+T++ C + AL L ++M P+ TY LL C+ +
Sbjct: 401 HKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLD 460
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
LL M + + + Y L+ G+ +GKLE+A F ++ G P TY ++
Sbjct: 461 EALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMI 520
Query: 519 EKLEKKRLGN 528
+ L K+ L +
Sbjct: 521 KGLLKEGLSD 530
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 144/288 (50%), Gaps = 3/288 (1%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
T + ++ L + G +A F M + GVE D + LMD + A KVF
Sbjct: 304 VTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEI 363
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ K C P + +NILI+G+CK+R++D+A+ + EM+ + +PD V+Y+ ++ C+
Sbjct: 364 MIRKGCAP-GAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLG 422
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
++ + KEM G P+++TY I++ K ++EALK+ + MK P+ Y+
Sbjct: 423 RPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYT 482
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
LI + AG+++ A E+F + G P++ TY MI + A L +KME+D
Sbjct: 483 ILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDD 542
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
P+ +Y +++ + + L+ M S++ T+ L+
Sbjct: 543 GFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 126/245 (51%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VDDA + M + P VV + F+ + ++K + V +M +V + I
Sbjct: 74 VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ L + ++ ++ V KM PD +++LI L G++K+A E+F +M K+G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PNV++Y T+I+ C A+ + +KME++ CKP+ TY+ ++ C+ + +
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ M + + + TY S+V G G+L A F+EM+ + ++P T+ +L + L
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313
Query: 522 EKKRL 526
K+ +
Sbjct: 314 CKEGM 318
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/149 (20%), Positives = 70/149 (46%), Gaps = 1/149 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T ++ + G D+A++ + MK+ +E + ++L++ + +E A ++F
Sbjct: 442 NLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELF 501
Query: 256 LE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ F D + + ++I G K D+A ++M GF P+ SY I+ + +
Sbjct: 502 SKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQN 561
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+D + EM K ++ T+ +++
Sbjct: 562 QDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 179/356 (50%), Gaps = 4/356 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+++ L +S + WE+ KEMD+ + + + ++ R G ++A++ ++ M
Sbjct: 168 YNSVLKGLCRSGMWDKAWEVFKEMDDFGVA-PDVRSFTILIGGFCRVGEIEEALKIYKEM 226
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL--SSQIFNILIHGWCKTRK 281
+ G++ D + S L+ + ++HA E + C L I+ ++I G+C+
Sbjct: 227 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR-CFGLVPDGVIYTMVIGGFCRAGL 285
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ DA + EM G PDVV+Y + C+E+ + L EM+E+G P + T+T
Sbjct: 286 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 345
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H ++++AL++++ M + PD Y++LI + + G + AN++++DM +
Sbjct: 346 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 405
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PN +TY+ +I S C + + E+A L +M P+ TY ++K CR +
Sbjct: 406 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 465
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M N VS D TY +L+ G I+ K+ A M + + P TY ML
Sbjct: 466 KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 521
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 171/352 (48%), Gaps = 37/352 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N MVD ++ LV M ++ G + T +++++ L R G +D A E F+
Sbjct: 133 HNVMVDARFRAGDAEAAMALVDSM--VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 190
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
M +GV D R+ F ILI G+C+ ++
Sbjct: 191 MDDFGVAPDVRS----------------------------------FTILIGGFCRVGEI 216
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
++A K KEM +G PD+VS++C I + R L+EM+ G P + YT+V
Sbjct: 217 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 276
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ +A +++AL+V ++M CLPD Y++L+ L K R+ DA + +M+++GV
Sbjct: 277 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 336
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P++ T+ T+I C + + AL+L M +PD TY L+ CR+ + N
Sbjct: 337 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 396
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
L M ++ + TY+ L+ E G++E A F +EMI+KGI+P TY
Sbjct: 397 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTY 448
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 124/253 (49%), Gaps = 1/253 (0%)
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A A + +F + + + +YC+ +F KVD + EM+++ P V+T+ +++
Sbjct: 79 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 138
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
A +A A+ + + M S P Y+S++ L ++G A E+F++M GV P
Sbjct: 139 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 198
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+V ++ +I C E E ALK+ ++M KPD +++ L+ + R+ +M L
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 258
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EK 523
M + D Y ++ G +G + A +EM+ G +P TY L L ++
Sbjct: 259 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 318
Query: 524 KRLGNAKERINKL 536
+RL +A+ +N++
Sbjct: 319 RRLLDAEGLLNEM 331
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/385 (28%), Positives = 196/385 (50%), Gaps = 7/385 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR--YDDAVEAF 220
++N ++ L K K + + L K+MD L+N ++ T++ ++ L R A A
Sbjct: 71 VFNKLLGSLVKKKHYSTVISLCKQMD-LSNIRPNVYTLTILINCLCHSNRDHVHFAFSAL 129
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKT 279
M K G++ L++ L + A K+F E S I + +I G CK
Sbjct: 130 GKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKI 189
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+A + +K+M ++G PDVV+Y I+ C+++ + EM ++G P+V+TY
Sbjct: 190 GHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTY 249
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+ ++H Q+NEA ++++M + +P+T ++ L+ L K G + +A +FE M +
Sbjct: 250 SSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTE 309
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
GV P+ TY+ ++ C +S+ + A KL M P Y L+ C+ +R+
Sbjct: 310 NGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNE 369
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
LL+ M+ D++ D TY++L++G ++G+ ++A F+EM S G++P TY +L +
Sbjct: 370 AKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLD 429
Query: 520 KLEKKRLGNAKERINKLLAHAKEQK 544
L K G+ E +LL +E K
Sbjct: 430 GLCKH--GHLDEAF-RLLKAMQESK 451
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 198/436 (45%), Gaps = 43/436 (9%)
Query: 145 FGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN-GYV-SLATMS 201
F F K + G T + T+++ L K + + VK DE+ G+ SL T +
Sbjct: 124 FAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAK---IIDAVKLFDEIGKMGFAPSLITYT 180
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD- 260
TI++ L + G +A++ + M++ G + D A + ++D+L K A F E D
Sbjct: 181 TIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQ 240
Query: 261 CIP------------------------LSSQI-----------FNILIHGWCKTRKVDDA 285
IP L Q+ F IL+ G CK + +A
Sbjct: 241 GIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEA 300
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
++ + M + G PD +Y+ ++ YC + + M KG PSV Y I+++
Sbjct: 301 RRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILING 360
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K++++NEA + +M D PDT YS+L+ +AGR + A ++F++M G++P+
Sbjct: 361 HCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPD 420
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
+TY+ ++ C + A +LL+ M+E +P Y L++ C +++ L +
Sbjct: 421 SITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFS 480
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM-LEEKLEKK 524
++F + TY ++ GL++ G AC F +M+ G +P TY + ++ L
Sbjct: 481 NLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNG 540
Query: 525 RLGNAKERINKLLAHA 540
NA I +++
Sbjct: 541 DPSNAVRLIEEMVGRG 556
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 130/270 (48%), Gaps = 6/270 (2%)
Query: 275 GWCKT----RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
G+C V DA + ++ P VV + + ++K + V K+M
Sbjct: 39 GFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLS 98
Query: 331 GCKPSVITYTIVMHALGKAKQ--INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+P+V T TI+++ L + + ++ A KM P + +L+ L ++
Sbjct: 99 NIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKII 158
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
DA ++F+++ K G P+++TY T+I C NAL+LL+KMEE CKPD Y ++
Sbjct: 159 DAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVI 218
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+ +R + + M + + TY+S++ G G+L A S F++MI + ++
Sbjct: 219 DSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVM 278
Query: 509 PYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
P T+ +L + L K+ + R+ +++
Sbjct: 279 PNTVTFTILVDGLCKEGMILEARRVFEMMT 308
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 131/290 (45%), Gaps = 38/290 (13%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
T + ++ L + G +A F M + GVE D S LMD + ++ A K+F
Sbjct: 282 VTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDI 341
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ K P S +++NILI+G CK+R++++A+ + EM+ + +PD V+Y+ ++ +C+
Sbjct: 342 MVGKGFAP-SVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAG 400
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ KEM G P ITY+I++ L K ++EA ++ + M+ P Y+
Sbjct: 401 RPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYN 460
Query: 376 SLI-------------------FI----------------LSKAGRVKDANEIFEDMKKQ 400
LI F+ L K G +A E+F M
Sbjct: 461 ILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVN 520
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
G +PN TYN I + NA++L+++M D T+ LL +
Sbjct: 521 GCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLDL 570
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 198/385 (51%), Gaps = 25/385 (6%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
+ K K++ + L +MD + ++ +++ ++ L R A+ M K G++
Sbjct: 102 IAKKKQYSTVVSLCNQMDLFGVTH-NVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQP 160
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-----------FNILIHGWCKT 279
D ++ +TL+ G +E E K+ + L +++ ++ +I+G CK+
Sbjct: 161 D----AITFNTLINGRCIEG------EIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKS 210
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
A + +++M ++G P++V+YT I+ C++ D L EM ++G P V+TY
Sbjct: 211 GNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTY 270
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+ ++H +NEA ++ +M + +P+T ++ L+ L K G V +A +FE M K
Sbjct: 271 STILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTK 330
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G PN TYN ++ C ++ + A K+L M + C P +Y L+ C+++R+
Sbjct: 331 KGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDE 390
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
LL M + +++ D TY++L++GL + G+ + A + F+EM S G++P TY L +
Sbjct: 391 AKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLD 450
Query: 520 KLEKKRLGNAKERINKLLAHAKEQK 544
L K G+ E + KLL +E K
Sbjct: 451 GLCKH--GHLDEAL-KLLKSMQESK 472
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 186/363 (51%), Gaps = 6/363 (1%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
H P++ Y+T+++ L KS + +L+++M+E +L +TI+ L + +DA
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEE-KGCKPNLVAYTTIIDSLCKDTLVNDA 251
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIH 274
++ M G+ D S ++ + A +F E ++ +P ++ F IL+
Sbjct: 252 MDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMP-NTVTFTILVD 310
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G CK V +A+ + M ++G P+ +Y ++ YC + L M +KGC P
Sbjct: 311 GLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAP 370
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
V +Y I+++ K ++++EA + +M + PDT YS+L+ L + GR ++A +F
Sbjct: 371 VVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLF 430
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M G++P+++TY+T++ C + ALKLL+ M+E +PD Y L++
Sbjct: 431 KEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIA 490
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+++V L + +F + + TY +++GL++ G + A F +M G +P +Y
Sbjct: 491 GKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSY 550
Query: 515 KML 517
++
Sbjct: 551 NVI 553
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 160/329 (48%), Gaps = 1/329 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
ST++ L + G A++ R M++ G + + A + ++D+L K V A + E D
Sbjct: 201 STVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVD 260
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
IP ++ ++HG+C +++A EM + P+ V++T ++ C+E +
Sbjct: 261 RGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSE 320
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ M +KG +P+ TY +M Q++EA KV + M C P Y+ LI
Sbjct: 321 ARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILIN 380
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
K R+ +A + +M ++ + P+ +TY+T++ C + AL L ++M P
Sbjct: 381 GYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLP 440
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY+ LL C+ + LL M ++ + D Y L+ G+ +GKLE+A F
Sbjct: 441 DLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELF 500
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKKRLGN 528
++ + GI P TY ++ + L K+ L +
Sbjct: 501 SKLFADGIQPTIRTYTIMIKGLLKEGLSD 529
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 144/288 (50%), Gaps = 3/288 (1%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
T + ++ L + G +A F M K G E + + LMD N ++ A KV
Sbjct: 303 VTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDI 362
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ K C P+ +NILI+G+CK R++D+A+ + EM ++ +PD V+Y+ ++ C+
Sbjct: 363 MVDKGCAPVVHS-YNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVG 421
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
++ + KEM G P ++TY+ ++ L K ++EALK+ + M+ PD Y+
Sbjct: 422 RPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYN 481
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
LI + AG+++ A E+F + G+ P + TY MI + A +L +KME+D
Sbjct: 482 ILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDD 541
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
P+ +Y +++ + + L+ M S D+ T+ L+
Sbjct: 542 GFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 120/245 (48%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA + M + P VV + F+ ++K + V +M G +V + I
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ L + + A+ V KM PD +++LI G +K+A +F +M ++G
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+V++Y+T+I+ C AL+LL+KMEE CKP+ Y ++ C+ +
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL+ M + D TY++++ G G L A F EM+ + ++P T+ +L + L
Sbjct: 253 DLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGL 312
Query: 522 EKKRL 526
K+ +
Sbjct: 313 CKEGM 317
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 2/216 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ K ++ L+ EM E T ST+M+ L + GR +A+ F+ M
Sbjct: 375 YNILINGYCKRRRLDEAKSLLVEMSE-KELTPDTVTYSTLMQGLCQVGRPQEALNLFKEM 433
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKV 282
G+ D S L+D L K ++ A K+ ++ I ++NILI G K+
Sbjct: 434 CSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKL 493
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ A++ ++F G P + +YT I+ +E + + ++M++ G P+ +Y ++
Sbjct: 494 EVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVI 553
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + + + A+++ ++M D+S + L+
Sbjct: 554 IQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%)
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
I++AL + +M + P + + ++K + + M GV NV + N
Sbjct: 73 IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I+ C + A+ +L KM + +PD T+ L+ C + +K L M +
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGN 528
D +Y++++ GL +SG +A +M KG P Y + + L K L N
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVN 249
>gi|115471383|ref|NP_001059290.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|33146978|dbj|BAC80051.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|50508482|dbj|BAD30659.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113610826|dbj|BAF21204.1| Os07g0249100 [Oryza sativa Japonica Group]
gi|215767773|dbj|BAH00002.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 882
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 181/360 (50%), Gaps = 4/360 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +++D LGK + + L ++M L+ G+ + ++++R GR +D + F+
Sbjct: 461 YCSLIDGLGKKGQVDEAYRLFEKM--LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKE 518
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS-QIFNILIHGWCKTRK 281
+ + G + D L+ MD + K VE +F + + L + ++ILIHG K +
Sbjct: 519 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 578
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ M QQGF+ D +Y ++ +C+ K + L+EM+EK +P+V TY
Sbjct: 579 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 638
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K +++EA ++E+ KS + YSSLI K GR+ +A I E+M K+G
Sbjct: 639 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 698
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PNV T+N+++ + E AL Q M+E C P+ TY+ L+ CR ++
Sbjct: 699 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 758
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M K + + TY +++ GL + G + A S FE + G +P +++ L E +
Sbjct: 759 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 818
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 188/386 (48%), Gaps = 31/386 (8%)
Query: 164 YNTMVDVLGKSKKF---CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
+N+++ LGK +K ++E++K+ E N+ +T + I+ L GGR ++A
Sbjct: 357 FNSILTCLGKKRKVDEALSLFEVMKKDAEPNS-----STYNIIIDMLCLGGRVEEAYRIL 411
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSSQIFNILIH 274
M+ + + +++++D L K +E AYK+F DC+ S LI
Sbjct: 412 DEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS-----LID 466
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY---CREKDFRKVDDTLKEMQEKG 331
G K +VD+A + ++M G + + V YT I ++ R++D K+ KE+ +G
Sbjct: 467 GLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKI---FKELIRRG 523
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
CKP + M + KA ++ + ++E ++S LPD YS LI L+KAG+ ++ +
Sbjct: 524 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 583
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
IF MK+QG + YN ++ C + A ++L++M+E +P TY ++
Sbjct: 584 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 643
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
+ R+ L + ++ Y+SL+ G + G+++ A EEM+ KG+ P
Sbjct: 644 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 703
Query: 512 STYKMLEEKLEKKRLGNAKERINKLL 537
T+ L + L K E IN+ L
Sbjct: 704 YTWNSLLDALVK------AEEINEAL 723
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 179/386 (46%), Gaps = 2/386 (0%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
+ ++ A+ FF K Q G Y +M+ VL K+ + EL +M+ + +
Sbjct: 262 AGNVDMAWKFFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAY 320
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
A + IM GR++DA + +++ G + + ++ L K V+ A +F
Sbjct: 321 AYNTMIMG-YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEV 379
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K +S +NI+I C +V++A + + EM P++++ ++ C+ +
Sbjct: 380 MKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKL 439
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + ++GC P +TY ++ LGK Q++EA +++EKM + Y+SL
Sbjct: 440 EEAYKIFESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSL 499
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I GR +D ++IF+++ ++G P++ NT + E E + + +
Sbjct: 500 IRNFFIHGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGF 559
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD +Y+ L+ + + + + + M + ++DA Y ++V G +SGK+ A
Sbjct: 560 LPDVRSYSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYE 619
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
EEM K + P +TY + + L K
Sbjct: 620 ILEEMKEKCVQPTVATYGAIVDGLAK 645
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 172/344 (50%), Gaps = 3/344 (0%)
Query: 182 ELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
++++EM L G + A + + LVR R DDAV A M++ A +VL+
Sbjct: 130 KVLEEMAVLGYGLPNQAC-AHLAAALVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGA 188
Query: 242 LVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
L + E A ++ + ++ + +F L+ + +V DA + E+ PD
Sbjct: 189 LAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVKGSCLEPD 248
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+V Y I+ + + + E++ +G KP ++YT ++ L KA ++ EA +++
Sbjct: 249 IVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFA 308
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+M+++ +P Y+++I AGR +DA ++ E ++++G +P+V+++N++++ +
Sbjct: 309 QMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 368
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+ + AL L + M++D +P+ TY ++ M C R++ +L M + + T
Sbjct: 369 KVDEALSLFEVMKKD-AEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVN 427
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+V L ++ KLE A FE +G P TY L + L KK
Sbjct: 428 IMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLIDGLGKK 471
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 1/257 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ +LI + R+ + A + +++M + G+ V +T + RE + E++
Sbjct: 182 YTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVK 241
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+P ++ Y + + GKA ++ A K + ++K+ PD Y+S+I++L KAGR+
Sbjct: 242 GSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLG 301
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A E+F M+ + VP YNTMI + E+A KLL+++ E C P ++ +L
Sbjct: 302 EAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSIL 361
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C KKR L + K D ++ TY ++ L G++E A +EM +
Sbjct: 362 T-CLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLF 420
Query: 509 PYHSTYKMLEEKLEKKR 525
P T ++ ++L K R
Sbjct: 421 PNLLTVNIMVDRLCKAR 437
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 129/257 (50%), Gaps = 2/257 (0%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A Q G+ YN +VD KS K +E+++EM E ++AT I+ L +
Sbjct: 588 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE-KCVQPTVATYGAIVDGLAKI 646
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIF 269
R D+A F K G+E + S L+D K ++ AY + E K + + +
Sbjct: 647 DRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 706
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N L+ K ++++A + M + P+ +Y+ I CR + + K ++MQ+
Sbjct: 707 NSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQK 766
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+G P+V+TYT ++ L K I +A ++E+ K++ +PD + +++LI +S A R +
Sbjct: 767 QGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAME 826
Query: 390 ANEIFEDMKKQGVVPNV 406
A ++FE+ + +G N+
Sbjct: 827 AYQVFEETRLRGCRINI 843
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 119/227 (52%), Gaps = 4/227 (1%)
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQ 267
+ G+ A E MK+ V+ ++D L K + ++ AY +F E K I L+
Sbjct: 610 KSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAKIDRLDEAYMLFEEAKSKGIELNVV 669
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+++ LI G+ K ++D+A ++EM ++G +P+V ++ ++ + ++ + + M
Sbjct: 670 LYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLLDALVKAEEINEALVCFQSM 729
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+E C P+ TY+I+++ L + ++ N+A ++ M+ +P+ Y+++I L+K G +
Sbjct: 730 KEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQKQGLVPNVVTYTTMISGLAKVGNI 789
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
DA +FE K G +P+ ++N +I S A++ Q EE
Sbjct: 790 TDAYSLFERFKANGGIPDAASFNALIEGM---SNANRAMEAYQVFEE 833
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 99/211 (46%), Gaps = 3/211 (1%)
Query: 318 RKVDDTL---KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
R++DD + M+ +P+ YT+++ AL +A++ AL++ +M+ +
Sbjct: 158 RRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLF 217
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++L+ L++ G+V DA + +++K + P+++ YN I + A K +++
Sbjct: 218 TTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKA 277
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
KPD +Y ++ + C+ R+ L M A Y +++ G +G+ E
Sbjct: 278 QGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFED 337
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
A E + +G +P ++ + L KKR
Sbjct: 338 AYKLLERLRERGCIPSVVSFNSILTCLGKKR 368
>gi|293332689|ref|NP_001168961.1| hypothetical protein [Zea mays]
gi|223974035|gb|ACN31205.1| unknown [Zea mays]
gi|413921836|gb|AFW61768.1| hypothetical protein ZEAMMB73_696968 [Zea mays]
Length = 521
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 181/356 (50%), Gaps = 9/356 (2%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G PE ++ V GK+++F L WE+V+ M N G ++ M +M R +
Sbjct: 130 AGLPPPPEAWHLAVWAAGKARRFDLAWEIVRRMR--NRGVLTCRVMVILMERYAAASEVN 187
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
A++ F M+K+ +E D L+ L K ++E A ++ K PL+++ FNI++
Sbjct: 188 KAIKTFDVMEKFKIESDQSVFYSLLHALCKIKNIEDAEELLFLRKKFFPLTAEGFNIILD 247
Query: 275 GWCKT-RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
GWC V +A++ +EM +PD +SYT I + + + EM+++G
Sbjct: 248 GWCNVITDVAEAKRVWREMSNHCITPDGMSYTLMISCFSKVGNLFDTLRVYDEMKKRGWI 307
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P ++ Y +++ L + + +A ++ K+ + PD Y+++I L ++ ++ +A ++
Sbjct: 308 PGIVVYNSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNNMIVPLCESCKLDEARKV 367
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL-KMCC 452
E M +G+VP + TY+ + + + +LKLLQKM+ED C P +T+ L+ K
Sbjct: 368 MESMILRGIVPTISTYHAFLK----QEGIDESLKLLQKMKEDGCGPKSDTFVMLIDKFFL 423
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ L + M K ++S Y +LV+GL++ G + A +++EM KG
Sbjct: 424 LNESGNALR-VWNEMRKYEISPVRAHYMTLVQGLVKHGCIPRALEYYDEMKEKGFA 478
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 185/381 (48%), Gaps = 6/381 (1%)
Query: 125 VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV 184
V S V LR T A FF WA Q G+ H YN ++++L K + + +
Sbjct: 84 VLGSHVAAVLRSLKVTGT-AISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIH 142
Query: 185 KEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
+EM L G + + + ++R R R DDAV F MK+ + D +L+D L
Sbjct: 143 EEM--LKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLC 200
Query: 244 KGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
K E A++VF E +P + ++ K ++V +A++ +M + GF PD
Sbjct: 201 KAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDA 260
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
++Y I+ + ++ L M K C P+ +TY I++++L KA + A +++
Sbjct: 261 IAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRV 320
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M + P++ Y+SLI +K+GR+K+A +F++M + G P+V+T+ MI C
Sbjct: 321 MAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGN 380
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
E A K ++M CKP+ TY +++ + R+ ++ M + D+ TY
Sbjct: 381 FEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYIC 440
Query: 482 LVRGLIESGKLELACSFFEEM 502
L+ G + G+L+ A +E+
Sbjct: 441 LLDGFCKLGRLDEAAQLLDEL 461
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 187/429 (43%), Gaps = 89/429 (20%)
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDD 215
+HT + +VD L K+ +E+ EM + G+V A + ++R L++ R +
Sbjct: 189 LHT---FLILVDCLCKAGMDEKAFEVFHEM--MAMGFVPPDRALHTAMVRTLLKAKRVKE 243
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPL--------- 264
A E F M+K G D A + ++D L K + A KV + K C+P
Sbjct: 244 AREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVN 303
Query: 265 -------------------------SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
+S I+ LIHG+ K+ ++ +A EM + G+ P
Sbjct: 304 SLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRP 363
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
DV+++T I+ C+ +F + + +EM GCKP+V+TYT ++ L K ++ A ++
Sbjct: 364 DVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIM 423
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+ M + C PD+ Y L+ K GR+ +A ++ +++ K PN+ Y++++ C
Sbjct: 424 KGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDG 483
Query: 420 SEEENAL------------------------------------KLLQKMEEDLCKPDCET 443
EN L ++ Q+M + CKPD T
Sbjct: 484 GSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATT 543
Query: 444 YAPLLKMCCRKKRMKV-LNFLLTHMFKNDVSM-----DAGTYASLVRGLIESGKLELACS 497
Y L+ CR + +V F L H D+ M DA TY L GL + G+++ A
Sbjct: 544 YNILINGLCRSRENRVERAFALLH----DLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVK 599
Query: 498 FFEEMISKG 506
EE S+G
Sbjct: 600 MLEEASSRG 608
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 190/399 (47%), Gaps = 20/399 (5%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRY 213
+G+ +Y +++ KS + L EM E GY + T + ++ L + G +
Sbjct: 324 SGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVE--AGYRPDVITHTVMIDGLCKSGNF 381
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNI 271
+ A ++F M + G + + + ++ L K V +A+++ + C P S +
Sbjct: 382 EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFP-DSVTYIC 440
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK- 330
L+ G+CK ++D+A + + E+ + SP++ Y+ ++ C D V++TL ++ E+
Sbjct: 441 LLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLC---DGGSVENTLDDLFEQS 497
Query: 331 -----GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL--SK 383
P + IV L K +++EA +++++M S+ C PD + Y+ LI L S+
Sbjct: 498 KAAAENLDPGLCCSIIV--GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSR 555
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
RV+ A + D++ G +P+ +TY + C E + A+K+L++ D
Sbjct: 556 ENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVA 615
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y L C + ++ L M + + DA Y ++ GLI+ KLE AC FF+EMI
Sbjct: 616 YTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMI 675
Query: 504 SKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAK 541
KG P +TY L + L + A R +LA +
Sbjct: 676 GKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGE 714
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 168/353 (47%), Gaps = 7/353 (1%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFR-GMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
+G V + ++ ++R L G A+ FR ++ G + D + LM+ LV +
Sbjct: 81 HGQVLGSHVAAVLRSLKVTG---TAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQ 137
Query: 251 AYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
Y + E K I ++ FNILI + +TR+ DDA + M ++ PD+ ++ ++
Sbjct: 138 CYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVD 197
Query: 310 HYCREKDFRKVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
C+ K + EM G P +T ++ L KAK++ EA +V+ +M+
Sbjct: 198 CLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFP 257
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
PD Y+++I L+KAG ++A ++ ++M + VP +TY +++S C E A +L
Sbjct: 258 PDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEEL 317
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+ M +P+ Y L+ + RMK L M + D T+ ++ GL +
Sbjct: 318 FRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCK 377
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHA 540
SG E A FEEM+ G P TY + + L K R+ NA + ++AH
Sbjct: 378 SGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHG 430
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 149/327 (45%), Gaps = 41/327 (12%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG--NSVEHAYKVF--LE 257
+I+ L + GR D+A F+ M G + D ++L++ L + N VE A+ + LE
Sbjct: 511 SIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLE 570
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+P + + L G CK +VD A K ++E +G++ DVV+YT C +
Sbjct: 571 MVGYLP-DAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQV 629
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ +EM +G P Y +++ L K K++ +A K +++M P + Y++L
Sbjct: 630 DRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTAL 689
Query: 378 IFILSKAGRVKDANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+ L AG V +A FE M +G +V +V+ Y+ +I C + + ALKL + M
Sbjct: 690 VQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDM---- 745
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+ + +V A T ASL GL+ SGK E A
Sbjct: 746 ------------------------------ISRGNVPT-AVTSASLFDGLVRSGKTEKAQ 774
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK 523
+EM + G P+ +T+ + + L K
Sbjct: 775 ELLQEMAAGGSPPHAATFTAILDGLRK 801
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 158/369 (42%), Gaps = 27/369 (7%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRG 210
+ GY + M+D L KS F + K +E+ G ++ T +TI++ L +
Sbjct: 357 VEAGYRPDVITHTVMIDGLCKSGNF---EQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKI 413
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS-QIF 269
GR +A +GM +G D+ L+D K ++ A ++ E C + Q++
Sbjct: 414 GRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLY 473
Query: 270 NILIHGWCKTRKVDDA-------QKAMKEMFQQGFSPDVVSYTC---FIEHYCREKDFRK 319
+ L+ G C V++ KA E G ++ C ++ CR
Sbjct: 474 SSLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACR------ 527
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ--INEALKVYEKMKSDDCLPDTSFYSSL 377
+ M +GCKP TY I+++ L ++++ + A + ++ LPD Y+ L
Sbjct: 528 ---IFQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPL 584
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
L K G V A ++ E+ +G +V+ Y + + C + + + A+ L Q+M
Sbjct: 585 CIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGG 644
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD Y ++ + K+++ M TY +LV+ L +G ++ A
Sbjct: 645 APDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFH 704
Query: 498 FFEEMISKG 506
FE M+++G
Sbjct: 705 RFEGMLARG 713
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 85/185 (45%), Gaps = 7/185 (3%)
Query: 179 LMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVL 238
L E+V++ G A I+ L++G + +DA + F M G + + L
Sbjct: 635 LFQEMVRQ-----GGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTAL 689
Query: 239 MDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
+ L +V+ A+ F + + + S I++ LIHG+CK KVD A K ++M +G
Sbjct: 690 VQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRG 749
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
P V+ + R K + L+EM G P T+T ++ L K+ + + L
Sbjct: 750 NVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLL 809
Query: 357 KVYEK 361
K+ ++
Sbjct: 810 KLVQE 814
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 197/383 (51%), Gaps = 8/383 (2%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE-LVKEMDELNNGYVSL 197
N + A AK+ G+M YN ++D + ++K+ + E + KEM E + ++
Sbjct: 146 NLINKALSIVNLAKSY-GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVE-SGVSPNV 203
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
T + ++R G + + F M++ G + + ++D K + A+K+
Sbjct: 204 YTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRL 263
Query: 256 LEFKDCIP-LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ K P L S +N++I+G C+ ++ + + ++EM ++ + PD V++ I YC
Sbjct: 264 MALKGLNPNLIS--YNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNV 321
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+F + EM + G P+V+TYT +++++ KA +N A++ ++M+ P+ Y
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI S+ G +K A +I ++M + G P ++TYN +I+ C E+A LLQ+M E
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE 441
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD +Y+ ++ CR + ++ L M +S D TY+SL++GL + +L
Sbjct: 442 RGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGE 501
Query: 495 ACSFFEEMISKGIVPYHSTYKML 517
C F+EM+S G+ P TY L
Sbjct: 502 VCDLFQEMLSLGLPPDEVTYTSL 524
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 198/419 (47%), Gaps = 7/419 (1%)
Query: 122 GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
GV N++++ +R + A G F ++G YN ++ + +
Sbjct: 166 GVLSYNAILDAVIRT-KQSVKIAEGIFK-EMVESGVSPNVYTYNILIRGFCTAGNLEMGL 223
Query: 182 ELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
EM E N ++ T +TI+ + + +A + R M G+ + + +V+++
Sbjct: 224 XFFGEM-ERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282
Query: 242 LVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L + ++ ++ E + +P FN LI+G+C A EM + G SP
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVP-DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+VV+YT I C+ + + + L +M+++G P+ TYT ++ + + +A ++
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
++M + P Y++LI GR++DA+ + ++M ++G +P+V++Y+T+IS C
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
E E A +L +M PD TY+ L++ C+++R+ + L M + D TY
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLL 537
SL+ G L+ A +EMI KG P TY +L K+ R AK + KLL
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLL 580
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 181/375 (48%), Gaps = 19/375 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
+NT+++ F L EM + NG ++ T +T++ + + G + A+E
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEM--VKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M+ G+ + R + L+D + ++ AY++ E ++ + +N LI+G C +
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++DA ++EM ++GF PDVVSY+ I +CR ++ K EM KG P V TY+
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K +++ E ++++M S PD Y+SLI G + A + ++M ++G
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC---------- 451
P+++TYN +I+ +S + A +LL K+ + P+ TY L+ C
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALA 608
Query: 452 -----CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
C K M + +L M + ++ Y ++ G + G +E A + ++EM+ G
Sbjct: 609 LMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSG 668
Query: 507 IVPYHSTYKMLEEKL 521
P+ T L + L
Sbjct: 669 FAPHSVTIMALAKSL 683
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV-DDT 323
SS +F++++ + ++ A + GF P V+SY ++ R K K+ +
Sbjct: 131 SSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGI 190
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
KEM E G P+V TY I++ A + L + +M+ + CLP+ Y+++I K
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCK 250
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
++ +A ++ M +G+ PN+++YN +I+ C + + ++L++M + PD T
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
+ L+ C L M KN +S + TY +L+ + ++G L A F ++M
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370
Query: 504 SKGIVPYHSTYKMLEEKLEKK 524
+G+ P TY L + ++
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQ 391
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI-FILSKAGRVKDA 390
CK S + +V+ + + IN+AL + KS +P Y++++ ++ VK A
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
IF++M + GV PNV TYN +I C E L +ME + C P+ TY ++
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDA 247
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ +++ LL M ++ + +Y ++ GL G+++ EEM + VP
Sbjct: 248 YCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPD 307
Query: 511 HSTYKML 517
T+ L
Sbjct: 308 RVTFNTL 314
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 113/298 (37%), Gaps = 60/298 (20%)
Query: 153 TQTGYMHTPEMYNTMVD---VLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLV 208
+ G+ T YN +++ +LG+ + L++EM E G++ + + STI+
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMED---ASGLLQEMIE--RGFIPDVVSYSTIISGFC 459
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQ 267
R + A + M G+ D S L+ L K + +F E +P
Sbjct: 460 RNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEV 519
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY---------------- 311
+ LI+ +C +D A + EM Q+GFSPD+V+Y I +
Sbjct: 520 TYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579
Query: 312 ------------------CREKDFR----------------KVDDTLKEMQEKGCKPSVI 337
C +F+ + D L+ M +KG K +
Sbjct: 580 LYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEE 639
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
Y +++H K I +A +Y++M P + +L L G+ + N++ +
Sbjct: 640 VYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLD 697
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 412 MISSACARSEEEN-ALKLLQKMEEDLCKPDCETYAPLLKMCCR-KKRMKVLNFLLTHMFK 469
++ +CAR N AL ++ + P +Y +L R K+ +K+ + M +
Sbjct: 137 LVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVE 196
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGN 528
+ VS + TY L+RG +G LE+ FF EM G +P TY +++ + +++G
Sbjct: 197 SGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGE 256
Query: 529 A 529
A
Sbjct: 257 A 257
>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
lyrata]
Length = 814
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/378 (29%), Positives = 186/378 (49%), Gaps = 6/378 (1%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
R +D A FF WA Q Y H P +Y +M++VL K+ K C V + + Y
Sbjct: 185 RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKT-KMCQGARRVLVLMKRRGIYR 243
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ +M R G+ DA++ M++ GVE + + +D V+ N +E A + F
Sbjct: 244 TPEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALR-F 302
Query: 256 LEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
LE + + + +N +I G+C +V++A + + +M +G PD VSY + + C+
Sbjct: 303 LERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCK 362
Query: 314 EKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
EK +V D +K+M +E G +TY ++H L K +EAL + + D
Sbjct: 363 EKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKV 422
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQK 431
YS+++ L K GR+ +A ++ +M +G P+V+TY +++ C E + A KLLQ
Sbjct: 423 GYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQI 482
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M KP+ +Y LL CR + ++ + S ++ TY+ L+ GL + GK
Sbjct: 483 MHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGK 542
Query: 492 LELACSFFEEMISKGIVP 509
L AC EM+ KG P
Sbjct: 543 LSEACDVVREMVLKGFFP 560
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 181/369 (49%), Gaps = 9/369 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFR 221
Y+ +V L K + +L+ EM L+ G+ + T + ++ R G D A + +
Sbjct: 424 YSAIVHALCKEGRMSEAKDLINEM--LSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 481
Query: 222 GMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTR 280
M +G + +T + + L++ L + G S+E + + + +S +++L+HG K
Sbjct: 482 IMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEG 541
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+ +A ++EM +GF P V ++ CR+ + ++E KGC +V+ +T
Sbjct: 542 KLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFT 601
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
V+H + +++ AL V + M + D Y++L+ L K GR+ +A E+ + M +
Sbjct: 602 TVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHK 661
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET-YAPLLKMCCRKKRMKV 459
G+ P +TY T+I C + ++ + +L+KM + + C+T Y +++ C +++
Sbjct: 662 GIDPTPVTYRTVIHRYCQMEKVDDLVAILEKM---ILRQKCKTIYNQVIEKLCGLGKLEE 718
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ LL + + DA T +L+ G ++ G LA M ++ ++P + L +
Sbjct: 719 ADKLLGKVLRTASRSDAKTCYALMEGYLKIGVPLLAYKVACRMFNRNLIPDVKMCEKLSK 778
Query: 520 KLEKKRLGN 528
+L + GN
Sbjct: 779 RLVVEGAGN 787
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 189/425 (44%), Gaps = 25/425 (5%)
Query: 105 SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGYMHTPE 162
+ Q + KV+ ++ GV + + T+ F +N L A F + G +
Sbjct: 258 AGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQV-VGIVPNVV 316
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS------TIMRRLVRGGRYDDA 216
YN M+ + +C + V+E EL + S + TIM L + R +
Sbjct: 317 TYNCMI------RGYCDLHR-VEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEV 369
Query: 217 VEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI----FNI 271
+ + M K++G+ +D + L+ L K +HA + KD +I ++
Sbjct: 370 RDLMKKMAKEHGLVRDQVTYNTLIHMLTKH---DHADEALWFLKDAEEKGFRIDKVGYSA 426
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGF-SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
++H CK ++ +A+ + EM +G PDVV+YT + +CR + K L+ M
Sbjct: 427 IVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTH 486
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G KP+ ++YT +++ L + + EA ++ + P++ YS L+ L K G++ +A
Sbjct: 487 GYKPNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEA 546
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
++ +M +G P + N ++ S C A K +++ C + + ++
Sbjct: 547 CDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHG 606
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ + +L M+ + D TY +LV L + G++ A ++M+ KGI P
Sbjct: 607 FCQNDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPT 666
Query: 511 HSTYK 515
TY+
Sbjct: 667 PVTYR 671
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 132/283 (46%), Gaps = 3/283 (1%)
Query: 238 LMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
+++ L K + A +V + K I + + F ++ + + ++ DA K + M + G
Sbjct: 216 MLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVLTLMQRAG 275
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
P+++ I+ + R K L+ MQ G P+V+TY ++ ++ EA+
Sbjct: 276 VEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAI 335
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM-KKQGVVPNVLTYNTMISS 415
++ + M S CLPD Y +++ L K R+ + ++ + M K+ G+V + +TYNT+I
Sbjct: 336 ELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVTYNTLIHM 395
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF-KNDVSM 474
+ AL L+ EE + D Y+ ++ C++ RM L+ M K
Sbjct: 396 LTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPP 455
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
D TY ++V G G+++ A + M + G P +Y L
Sbjct: 456 DVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTAL 498
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 125/265 (47%), Gaps = 6/265 (2%)
Query: 280 RKVDDAQKAMKEMF----QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
R DD + A+K + Q + D + Y +E + K + L M+ +G +
Sbjct: 185 RSQDDERVALKFFYWADRQWRYRHDPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRT 244
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ VM + +A Q+ +ALKV M+ P+ ++ I + +A R++ A E
Sbjct: 245 PEAFLRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLE 304
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M+ G+VPNV+TYN MI C E A++LL M C PD +Y ++ C++K
Sbjct: 305 RMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEK 364
Query: 456 RMKVLNFLLTHMFK-NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
R+ + L+ M K + + D TY +L+ L + + A F ++ KG Y
Sbjct: 365 RIVEVRDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGY 424
Query: 515 KMLEEKLEKK-RLGNAKERINKLLA 538
+ L K+ R+ AK+ IN++L+
Sbjct: 425 SAIVHALCKEGRMSEAKDLINEMLS 449
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 179/356 (50%), Gaps = 4/356 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+++ L +S + WE+ KEMD+ + + + ++ R G ++A++ ++ M
Sbjct: 229 YNSVLKGLCRSGMWDKAWEVFKEMDDFGVA-PDVRSFTILIGGFCRVGEIEEALKIYKEM 287
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL--SSQIFNILIHGWCKTRK 281
+ G++ D + S L+ + ++HA E + C L I+ ++I G+C+
Sbjct: 288 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMR-CFGLVPDGVIYTMVIGGFCRAGL 346
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ DA + EM G PDVV+Y + C+E+ + L EM+E+G P + T+T
Sbjct: 347 MSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTT 406
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H ++++AL++++ M + PD Y++LI + + G + AN++++DM +
Sbjct: 407 LIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSRE 466
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PN +TY+ +I S C + + E+A L +M P+ TY ++K CR +
Sbjct: 467 IFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQ 526
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M N VS D TY +L+ G I+ K+ A M + + P TY ML
Sbjct: 527 KFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNML 582
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/352 (29%), Positives = 171/352 (48%), Gaps = 37/352 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N MVD ++ LV M ++ G + T +++++ L R G +D A E F+
Sbjct: 194 HNVMVDARFRAGDAEAAMALVDSM--VSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKE 251
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
M +GV D R+ F ILI G+C+ ++
Sbjct: 252 MDDFGVAPDVRS----------------------------------FTILIGGFCRVGEI 277
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
++A K KEM +G PD+VS++C I + R L+EM+ G P + YT+V
Sbjct: 278 EEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMV 337
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ +A +++AL+V ++M CLPD Y++L+ L K R+ DA + +M+++GV
Sbjct: 338 IGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGV 397
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P++ T+ T+I C + + AL+L M +PD TY L+ CR+ + N
Sbjct: 398 PPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAND 457
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
L M ++ + TY+ L+ E G++E A F +EMI+KGI+P TY
Sbjct: 458 LWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTY 509
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 1/310 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ R G DA+ M G D + L++ L K + A + E ++
Sbjct: 335 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 394
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+P F LIHG+C K+D A + M Q PD+V+Y I+ CR+ D K
Sbjct: 395 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 454
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+D +M + P+ +TY+I++ + + Q+ +A ++M + LP+ Y+S+I
Sbjct: 455 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 514
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
++G V + + M V P+++TYNT+I + +A KLL ME++ +P
Sbjct: 515 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 574
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY L+ ++ ++ M + D TY S++ G + +G + A
Sbjct: 575 DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLH 634
Query: 500 EEMISKGIVP 509
+EM+ +G P
Sbjct: 635 DEMLQRGFAP 644
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 4/279 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ L K ++ L+ EM E L T +T++ G+ D A++ F M
Sbjct: 369 YNTLLNGLCKERRLLDAEGLLNEMRE-RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 427
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ D + L+D + + ++ A ++ + ++ P + ++ILI C+ +
Sbjct: 428 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP-NHVTYSILIDSHCEKGQ 486
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V+DA + EM +G P++++Y I+ YCR + K L++M P +ITY
Sbjct: 487 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 546
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H K ++++A K+ M+ + PD Y+ LI S G V++A IFE M +G
Sbjct: 547 LIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG 606
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ P+ TY +MI+ + A +L +M + PD
Sbjct: 607 IEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 124/253 (49%), Gaps = 1/253 (0%)
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A A + +F + + + +YC+ +F KVD + EM+++ P V+T+ +++
Sbjct: 140 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 199
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
A +A A+ + + M S P Y+S++ L ++G A E+F++M GV P
Sbjct: 200 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 259
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+V ++ +I C E E ALK+ ++M KPD +++ L+ + R+ +M L
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 319
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EK 523
M + D Y ++ G +G + A +EM+ G +P TY L L ++
Sbjct: 320 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 379
Query: 524 KRLGNAKERINKL 536
+RL +A+ +N++
Sbjct: 380 RRLLDAEGLLNEM 392
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 10/215 (4%)
Query: 164 YNTMVDVL---GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
YNT++D + G K +W+ + + N T S ++ G+ +DA
Sbjct: 439 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH----VTYSILIDSHCEKGQVEDAFGFL 494
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCK 278
M G+ + + ++ + +V K FL+ +S + +N LIHG+ K
Sbjct: 495 DEMINKGILPNIMTYNSIIKGYCRSGNVSKGQK-FLQKMMVNKVSPDLITYNTLIHGYIK 553
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
K+ DA K + M ++ PDVV+Y I + + ++ ++M KG +P T
Sbjct: 554 EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYT 613
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
Y +++ A EA +++++M PD F
Sbjct: 614 YMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDKF 648
>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
Length = 600
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 112/414 (27%), Positives = 199/414 (48%), Gaps = 17/414 (4%)
Query: 125 VSNSLVEQTLRRFSNDL----TPAFGFFTWAKTQTGYMH--TPEM------YNTMVDVLG 172
V + L+ Q L+RF D+ + G+ TGY TP+ Y T++ L
Sbjct: 60 VGHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA 119
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT 232
SK+ EL +E+ ++ + ++ L++ GR +D ++ F M
Sbjct: 120 DSKRIDEACELFEELKTAGCS-PNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTR 178
Query: 233 RALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
+V++D L K + A KVF + K C+P + + LI G+ K K+D+A+K +
Sbjct: 179 TTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVP-DTITYTTLIDGFSKASKMDEARKLLD 237
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
M +G P V+Y + +C+ + + + +M+E+GC+P + +T ++
Sbjct: 238 VMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKG 297
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
+ EA +V +M + C PD Y+SLI +L GRV +A +F+ M ++G P+ LTY
Sbjct: 298 RAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYG 357
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
T+I + E A ++L+ M + PDC Y L+ + +R+ + M +
Sbjct: 358 TIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVAS 417
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISK-GIVPYHSTYKMLEEKLEK 523
+ +A T+ L+ GL + GK + A S F+EM+ K + P +Y +L + L K
Sbjct: 418 GIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGK 471
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 174/380 (45%), Gaps = 42/380 (11%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ + +T++ L + D+A + F M G E D A + L+ K + +K+
Sbjct: 6 TIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLL 65
Query: 256 LEFKDCIPLSSQIFNILIHGWCK--------------------------------TRKVD 283
+ ++ +IHG+CK ++++D
Sbjct: 66 NQALKRFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRID 125
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKPSVITYT 340
+A + +E+ G SP+VV+YT I+ + +++D LK EM C P+ TYT
Sbjct: 126 EACELFEELKTAGCSPNVVAYTAVIDGLLKAG---RIEDGLKNFEEMSGSSCVPTRTTYT 182
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+V+ L KA+ + +A KV+E+M C+PDT Y++LI SKA ++ +A ++ + M +
Sbjct: 183 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 242
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P +TY +++ C A +++ +M E C+P + LL K R +
Sbjct: 243 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 302
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+LT M + D Y SL+ L +G++ A F+ MI KG P TY + +
Sbjct: 303 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 362
Query: 521 LEKKRLGN--AKERINKLLA 538
K +GN A I +L+A
Sbjct: 363 FSK--IGNVEAAGEILELMA 380
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 137/280 (48%), Gaps = 3/280 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFK 259
++++ L GR +A F M + G D ++ K +VE A ++ L K
Sbjct: 322 TSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 381
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ +N L+ G+ K +VD A M G P+ V++ + ++ +
Sbjct: 382 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 441
Query: 320 VDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
KEM EK P++++YTI++ LGKA +++EA +++M +P+ Y+SLI
Sbjct: 442 AFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLI 501
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ L+KAGR+ +A ++ EDM K GV P+V Y+ +I+ S + A + Q+M + C
Sbjct: 502 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 561
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
P+ TY L + R L + H F V+M+AG+
Sbjct: 562 PNEVTYKVLRRGFRAAGRALDLEAVKQH-FSQGVAMEAGS 600
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 93/196 (47%), Gaps = 4/196 (2%)
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
GC+P++++Y V+ L +++EA K + M + C PD +++LI KAG+ +
Sbjct: 2 GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+++ K+ P+V Y ++I C + + + L D +Y ++K
Sbjct: 62 HKLLNQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASL---DVISYTTVIKG 117
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
KR+ L + S + Y +++ GL+++G++E FEEM VP
Sbjct: 118 LADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPT 177
Query: 511 HSTYKMLEEKLEKKRL 526
+TY ++ + L K ++
Sbjct: 178 RTTYTVVIDGLCKAQM 193
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 192/402 (47%), Gaps = 16/402 (3%)
Query: 132 QTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD--- 188
+TLRR D A F WA Q ++ + +Y ++ LGK+ F M +++EM
Sbjct: 69 ETLRR-QTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSG 127
Query: 189 -ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK-KYGVEKDTRALSVLMDTLVKGN 246
E + G + S L YD+ V + M+ +Y ++ DTR +VL++ LV N
Sbjct: 128 CEFDRGIFLIFVESYGKFEL-----YDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDAN 182
Query: 247 S---VEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
VE A+ + + I FNILI CK +V A M+EM G SPD +
Sbjct: 183 KLKLVESAHSSMVRRR--IRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETT 240
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
+T ++ Y + ++M E GC + +T ++++ K +I++AL ++
Sbjct: 241 FTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAV 300
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
S+ PD Y++L+ L K G K A E+ + M G+ P++ TYN++IS C E E
Sbjct: 301 SEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIE 360
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A+K+L +M C P+ TY ++ C++ R+ + + + D T+ SL+
Sbjct: 361 EAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLI 420
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+GL S + A FEEM KG P TY ML + L R
Sbjct: 421 QGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSR 462
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 194/387 (50%), Gaps = 7/387 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++VL + K L+ M + ++T + +++ L + + A+ M
Sbjct: 171 YNVLLNVLVDANKLKLVESAHSSMVRRRIRH-DVSTFNILIKALCKAHQVRPAILMMEEM 229
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKV---FLEFKDCIPLSSQIFNILIHGWCKTR 280
YG+ D + +M ++G +++ A ++ +E+ P + N+LI+G+CK
Sbjct: 230 PSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYG--CPCTDVTVNVLINGFCKQG 287
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++D A ++E +GF PD +Y + C+ + + + M G P + TY
Sbjct: 288 RIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYN 347
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L K +I EA+K+ ++M S DC P+ Y+++I L K RV +A EI + +
Sbjct: 348 SLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSK 407
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G++P+V T+N++I C S ++A+ L ++M+ C+PD TY L+ C ++++
Sbjct: 408 GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA 467
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
LL M N + + Y +L+ G ++ ++E A F+EM +G+ TY L +
Sbjct: 468 LNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDG 527
Query: 521 LEK-KRLGNAKERINKLLAHAKEQKTF 546
L K KR+ +A + +++++ F
Sbjct: 528 LCKSKRVEDAAQLMDQMIMEGLRPDKF 554
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 174/328 (53%), Gaps = 3/328 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ L + G A+E M G++ D + L+ L K +E A K+ +
Sbjct: 310 TYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQM 369
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+DC P ++ +N +I CK +VD+A + + + +G PDV ++ I+ C +
Sbjct: 370 VSRDCSP-NAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSN 428
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ D +EM+ KGC+P TY +++ +L ++++ EAL + ++M+ + C + Y++
Sbjct: 429 HKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNT 488
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI K R+++A EIF++M+ QGV + +TYNT+I C E+A +L+ +M +
Sbjct: 489 LIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEG 548
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+PD TY LL C+ +K ++ M + + D TYA+L+ GL ++G++++A
Sbjct: 549 LRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVAS 608
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ KG+V Y + + L K+
Sbjct: 609 RLLRSIQMKGMVLTPHAYNPVIQALFKR 636
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 148/328 (45%), Gaps = 39/328 (11%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF- 255
+ T +++++ L + A++ F MK G D ++L+D+L +E A +
Sbjct: 413 VCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLK 472
Query: 256 -LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+E C + I+N LI G+CK +++++A++ EM QG S D V+Y I+ C+
Sbjct: 473 EMELNGC-ARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKS 531
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
K + +M +G +P TY ++ K I +A + + M S C PD Y
Sbjct: 532 KRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTY 591
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI L KAGRV+ A+ + ++ +G+V YN +I + R+ A++L ++M +
Sbjct: 592 ATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLD 651
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE-SGKLE 493
P DA TY + RGL G +
Sbjct: 652 KSEPP-----------------------------------DAITYKIVYRGLCNGGGPIG 676
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKL 521
A F EMI +G +P S++ ML E L
Sbjct: 677 EAVDFTVEMIERGNIPEFSSFVMLAEGL 704
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 130/302 (43%), Gaps = 2/302 (0%)
Query: 238 LMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ- 295
++ L K S E+ +V E K IF I + + K D+ +K M +
Sbjct: 103 ILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEY 162
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
PD Y + + V+ M + + V T+ I++ AL KA Q+ A
Sbjct: 163 RIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPA 222
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+ + E+M S PD + +++++ + G + A I E M + G +T N +I+
Sbjct: 223 ILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLING 282
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C + + AL +Q+ + +PD TY L+ C+ K ++ M + D
Sbjct: 283 FCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPD 342
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
TY SL+ GL + G++E A ++M+S+ P TY + L K+ + I +
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402
Query: 536 LL 537
LL
Sbjct: 403 LL 404
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/378 (20%), Positives = 156/378 (41%), Gaps = 52/378 (13%)
Query: 69 LAGWVESHRLNEKSRISSRVLSENHETDVDKISKI-----LSKQYQSPDKVVEALKGCGV 123
++ + +R++E + I+ + S+ DV + + LS ++S + E +KG G
Sbjct: 385 ISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGC 444
Query: 124 S----VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCL 179
N L++ S L A + G +YNT++D K+K
Sbjct: 445 RPDEFTYNMLIDSLCS--SRKLEEALNLLKEMELN-GCARNVVIYNTLIDGFCKNK---- 497
Query: 180 MWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
R ++A E F M+ GV +D+ + L+
Sbjct: 498 --------------------------------RIEEAEEIFDEMELQGVSRDSVTYNTLI 525
Query: 240 DTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
D L K VE A ++ + + + +N L+ +CKT + A ++ M G +
Sbjct: 526 DGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCN 585
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PD+V+Y I C+ + L+ +Q KG + Y V+ AL K + +EA+++
Sbjct: 586 PDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRL 645
Query: 359 YEKMKSDDCLPDTSFYSSLIF--ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ +M PD Y +++ + + G + +A + +M ++G +P ++ +
Sbjct: 646 FREMLDKSEPPDAITY-KIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGL 704
Query: 417 CARSEEENALKLLQKMEE 434
C S ++ +KL+ + E
Sbjct: 705 CTLSMDDTLVKLVDMIME 722
>gi|125557843|gb|EAZ03379.1| hypothetical protein OsI_25524 [Oryza sativa Indica Group]
Length = 716
Score = 166 bits (419), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 181/360 (50%), Gaps = 4/360 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +++D LGK + + L ++M L+ G+ + ++++R GR +D + F+
Sbjct: 327 YCSLIDGLGKKGQVDEAYRLFEKM--LDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKE 384
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS-QIFNILIHGWCKTRK 281
+ + G + D L+ MD + K VE +F + + L + ++ILIHG K +
Sbjct: 385 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 444
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ M QQGF+ D +Y ++ +C+ K + L+EM+EK +P+V TY
Sbjct: 445 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 504
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K +++EA ++E+ KS + YSSLI K GR+ +A I E+M K+G
Sbjct: 505 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 564
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PNV T+N+++ + E AL Q M+E C P+ TY+ L+ CR ++
Sbjct: 565 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 624
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M K + + TY +++ GL + G + A S FE + G +P +++ L E +
Sbjct: 625 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 684
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 188/386 (48%), Gaps = 31/386 (8%)
Query: 164 YNTMVDVLGKSKKF---CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
+N+++ LGK +K ++E++K+ E N+ +T + I+ L GGR ++A
Sbjct: 223 FNSILTCLGKKRKVDEALSLFEVMKKDAEPNS-----STYNIIIDMLCLGGRVEEAYRIL 277
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSSQIFNILIH 274
M+ + + +++++D L K +E AYK+F DC+ S LI
Sbjct: 278 DEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS-----LID 332
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY---CREKDFRKVDDTLKEMQEKG 331
G K +VD+A + ++M G + + V YT I ++ R++D KV KE+ +G
Sbjct: 333 GLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKV---FKELIRRG 389
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
CKP + M + KA ++ + ++E ++S LPD YS LI L+KAG+ ++ +
Sbjct: 390 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 449
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
IF MK+QG + YN ++ C + A ++L++M+E +P TY ++
Sbjct: 450 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 509
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
+ R+ L + ++ Y+SL+ G + G+++ A EEM+ KG+ P
Sbjct: 510 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 569
Query: 512 STYKMLEEKLEKKRLGNAKERINKLL 537
T+ L + L K E IN+ L
Sbjct: 570 YTWNSLLDALVK------AEEINEAL 589
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 169/360 (46%), Gaps = 1/360 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y +M+ VL K+ + EL +M+ + + A + IM GR++DA + +
Sbjct: 153 YTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMG-YGSAGRFEDAYKLLERL 211
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
++ G + + ++ L K V+ A +F K +S +NI+I C +V+
Sbjct: 212 RERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVE 271
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+A + + EM P++++ ++ C+ + + + ++GC P +TY ++
Sbjct: 272 EAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCSLI 331
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
LGK Q++EA +++EKM + Y+SLI GR +D +++F+++ ++G
Sbjct: 332 DGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKVFKELIRRGCK 391
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P++ NT + E E + + + PD +Y+ L+ + + + + +
Sbjct: 392 PDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETSNI 451
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
M + ++DA Y ++V G +SGK+ A EEM K + P +TY + + L K
Sbjct: 452 FHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGLAK 511
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 160/319 (50%), Gaps = 2/319 (0%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLS 265
LVR R DDAV A M++ A +VL+ L + E A ++ + ++ +
Sbjct: 20 LVRARRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVG 79
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+F L+ + +V DA + E+ PD+V Y I+ + + +
Sbjct: 80 VHLFTTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFH 139
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
E++ +G KP ++YT ++ L KA ++ EA +++ +M+++ +P Y+++I AG
Sbjct: 140 ELKAQGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAG 199
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
R +DA ++ E ++++G +P+V+++N++++ + + + AL L + M++D +P+ TY
Sbjct: 200 RFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKD-AEPNSSTYN 258
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
++ M C R++ +L M + + T +V L ++ KLE A FE +
Sbjct: 259 IIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQR 318
Query: 506 GIVPYHSTYKMLEEKLEKK 524
G P TY L + L KK
Sbjct: 319 GCNPDCVTYCSLIDGLGKK 337
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 126/257 (49%), Gaps = 1/257 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ +LI + R+ + A + +++M + G+ V +T + RE + E++
Sbjct: 48 YTVLIGALAEARRPERALELLRQMQEVGYEVGVHLFTTLVRALAREGQVADALALVDEVK 107
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+P ++ Y + + GKA ++ A K + ++K+ PD Y+S+I++L KAGR+
Sbjct: 108 GSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKAQGLKPDDVSYTSMIWVLCKAGRLG 167
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A E+F M+ + VP YNTMI + E+A KLL+++ E C P ++ +L
Sbjct: 168 EAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFEDAYKLLERLRERGCIPSVVSFNSIL 227
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C KKR L + K D ++ TY ++ L G++E A +EM +
Sbjct: 228 T-CLGKKRKVDEALSLFEVMKKDAEPNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLF 286
Query: 509 PYHSTYKMLEEKLEKKR 525
P T ++ ++L K R
Sbjct: 287 PNLLTVNIMVDRLCKAR 303
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 2/241 (0%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A Q G+ YN +VD KS K +E+++EM E ++AT I+ L +
Sbjct: 454 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE-KCVQPTVATYGAIVDGLAKI 512
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIF 269
R D+A F K G+E + S L+D K ++ AY + E K + + +
Sbjct: 513 DRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 572
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N L+ K ++++A + M + P+ +Y+ I CR + + K ++MQ+
Sbjct: 573 NSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQK 632
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+G P+V+TYT ++ L K I +A ++E+ K++ +PD + +++LI +S A R +
Sbjct: 633 QGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAME 692
Query: 390 A 390
A
Sbjct: 693 A 693
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 99/211 (46%), Gaps = 3/211 (1%)
Query: 318 RKVDDTL---KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
R++DD + M+ +P+ YT+++ AL +A++ AL++ +M+ +
Sbjct: 24 RRLDDAVLAVAVMRRLKFRPAFSAYTVLIGALAEARRPERALELLRQMQEVGYEVGVHLF 83
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++L+ L++ G+V DA + +++K + P+++ YN I + A K +++
Sbjct: 84 TTLVRALAREGQVADALALVDEVKGSCLEPDIVLYNVCIDCFGKAGNVDMACKFFHELKA 143
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
KPD +Y ++ + C+ R+ L M A Y +++ G +G+ E
Sbjct: 144 QGLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMIMGYGSAGRFED 203
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
A E + +G +P ++ + L KKR
Sbjct: 204 AYKLLERLRERGCIPSVVSFNSILTCLGKKR 234
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 175/336 (52%), Gaps = 1/336 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ R G D A M++ G++ + + +++ + K +E A KVF E
Sbjct: 194 TYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEM 253
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K+ + +N L+ G+CK +A EM ++G PDVV++T I C+ +
Sbjct: 254 VKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNL 313
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ ++EM+E+G + + IT+T ++ K +++AL +M+ P Y++L
Sbjct: 314 ERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNAL 373
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I GR+ +A E+ +M+ +GV P+V+TY+T++S+ C + +A +L Q+M E+
Sbjct: 374 INGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV 433
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD TY+ L+++ C +KR+ + L +M + D TY SL+ G + G +E A S
Sbjct: 434 LPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALS 493
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+EM+ G++P TY +L L K +R+
Sbjct: 494 LHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRL 529
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/393 (26%), Positives = 188/393 (47%), Gaps = 22/393 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT+V G K C L + G + + T ++++ + + G + AV R
Sbjct: 265 YNTLVG--GYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVRE 322
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
M++ G++ + + L+D K ++ A E + C I S +N LI+G+C +
Sbjct: 323 MRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGR 382
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A++ ++EM +G PDVV+Y+ + YC+ D ++M E G P ITY+
Sbjct: 383 MDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSS 442
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L + K++ +A +++ M S PD Y+SLI K G V+ A + ++M K G
Sbjct: 443 LIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAG 502
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V+P+V+TY+ +I+ + + A +LL K+ + P Y L++ CCR +K +
Sbjct: 503 VLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMR-CCRNAELKSVL 561
Query: 462 FLL----------------THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
LL + + ++D Y+ L+ G G + A SF ++M+
Sbjct: 562 ALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQC 621
Query: 506 GIVPYH-STYKMLEEKLEKKRLGNAKERINKLL 537
G P ST ++ EK + A + I +LL
Sbjct: 622 GFAPNSTSTISLIRGLFEKGMVVEADQVIQQLL 654
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 137/297 (46%), Gaps = 36/297 (12%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+NIL+ C +A +++M G P+ V+Y + +CR + + + + M+
Sbjct: 160 YNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMR 219
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E G KP+++T+ V++ + KA ++ +A KV+++M + PD Y++L+ K G
Sbjct: 220 EGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSH 279
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE-------------- 434
+A +F +M ++G++P+V+T+ ++I C E A+ L+++M E
Sbjct: 280 EALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALI 339
Query: 435 -DLCK--------------------PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
CK P Y L+ C RM L+ M V
Sbjct: 340 DGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVK 399
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNA 529
D TY++++ ++G A ++M+ G++P TY L L E+KRLG+A
Sbjct: 400 PDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDA 456
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 117/233 (50%)
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A++ M G +P+V +Y + C ++ L++M+ GC P+ +TY ++
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVA 200
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
A +A +++ A ++ + M+ P+ ++S++ + KAGR++DA ++F++M K+G+ P
Sbjct: 201 AFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAP 260
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+ ++YNT++ C AL + +M PD T+ L+ + C+ ++ L+
Sbjct: 261 DGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLV 320
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M + + M+ T+ +L+ G + G L+ A EM I P Y L
Sbjct: 321 REMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNAL 373
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/291 (22%), Positives = 114/291 (39%), Gaps = 51/291 (17%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-F 269
GR D+A E R M+ GV+ D S ++ K A+++ + + L I +
Sbjct: 381 GRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITY 440
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+ LI C+ +++ DA K M G PD V+YT I+ +C+E + + EM +
Sbjct: 441 SSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVK 500
Query: 330 KGCKPSVITYTIVMHALGKAKQ-------------------------------------- 351
G P V+TY+++++ L K+ +
Sbjct: 501 AGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSV 560
Query: 352 ------------INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+NEA KVY+ + + D S YS LI + G V A + M +
Sbjct: 561 LALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQ 620
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
G PN + ++I + A +++Q++ D E L+ +
Sbjct: 621 CGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDL 671
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 112/268 (41%), Gaps = 17/268 (6%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G + Y++++ VL + K+ L K M L T ++++ + G
Sbjct: 430 ENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGL-QPDEVTYTSLIDGHCKEGNV 488
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI----- 268
+ A+ M K GV D SVL++ L K + A ++ + P+ + I
Sbjct: 489 ERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDAL 548
Query: 269 -----------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
L+ G+C +++A K + + + ++ D Y+ I +CRE +
Sbjct: 549 MRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNV 608
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
K K+M + G P+ + ++ L + + EA +V +++ + L D +L
Sbjct: 609 MKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKAL 668
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPN 405
I + K G V ++ M + G++P+
Sbjct: 669 IDLNLKEGNVDAVLDVLHGMARDGLLPS 696
>gi|222636757|gb|EEE66889.1| hypothetical protein OsJ_23712 [Oryza sativa Japonica Group]
Length = 579
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 102/360 (28%), Positives = 181/360 (50%), Gaps = 4/360 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +++D LGK + + L ++M L+ G+ + ++++R GR +D + F+
Sbjct: 195 YCSLIDGLGKKGQVDEAYRLFEKM--LDAGHNANPVVYTSLIRNFFIHGRKEDGHKIFKE 252
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS-QIFNILIHGWCKTRK 281
+ + G + D L+ MD + K VE +F + + L + ++ILIHG K +
Sbjct: 253 LIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQ 312
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ M QQGF+ D +Y ++ +C+ K + L+EM+EK +P+V TY
Sbjct: 313 ARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGA 372
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K +++EA ++E+ KS + YSSLI K GR+ +A I E+M K+G
Sbjct: 373 IVDGLAKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKG 432
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PNV T+N+++ + E AL Q M+E C P+ TY+ L+ CR ++
Sbjct: 433 LTPNVYTWNSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAF 492
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M K + + TY +++ GL + G + A S FE + G +P +++ L E +
Sbjct: 493 VFWQDMQKQGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGM 552
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 188/386 (48%), Gaps = 31/386 (8%)
Query: 164 YNTMVDVLGKSKKF---CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
+N+++ LGK +K ++E++K+ E N+ +T + I+ L GGR ++A
Sbjct: 91 FNSILTCLGKKRKVDEALSLFEVMKKDAEPNS-----STYNIIIDMLCLGGRVEEAYRIL 145
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSSQIFNILIH 274
M+ + + +++++D L K +E AYK+F DC+ S LI
Sbjct: 146 DEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKIFESASQRGCNPDCVTYCS-----LID 200
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY---CREKDFRKVDDTLKEMQEKG 331
G K +VD+A + ++M G + + V YT I ++ R++D K+ KE+ +G
Sbjct: 201 GLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFIHGRKEDGHKI---FKELIRRG 257
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
CKP + M + KA ++ + ++E ++S LPD YS LI L+KAG+ ++ +
Sbjct: 258 CKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRSYSILIHGLTKAGQARETS 317
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
IF MK+QG + YN ++ C + A ++L++M+E +P TY ++
Sbjct: 318 NIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKEKCVQPTVATYGAIVDGL 377
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
+ R+ L + ++ Y+SL+ G + G+++ A EEM+ KG+ P
Sbjct: 378 AKIDRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 437
Query: 512 STYKMLEEKLEKKRLGNAKERINKLL 537
T+ L + L K E IN+ L
Sbjct: 438 YTWNSLLDALVK------AEEINEAL 457
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 176/380 (46%), Gaps = 2/380 (0%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
A+ FF K Q G Y +M+ VL K+ + EL +M+ + + A + I
Sbjct: 2 AWKFFHELKAQ-GLKPDDVSYTSMIWVLCKAGRLGEAEELFAQMEAERSVPCAYAYNTMI 60
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
M GR++DA + +++ G + + ++ L K V+ A +F K
Sbjct: 61 MG-YGSAGRFEDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALSLFEVMKKDAE 119
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+S +NI+I C +V++A + + EM P++++ ++ C+ + +
Sbjct: 120 PNSSTYNIIIDMLCLGGRVEEAYRILDEMEHASLFPNLLTVNIMVDRLCKARKLEEAYKI 179
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+ ++GC P +TY ++ LGK Q++EA +++EKM + Y+SLI
Sbjct: 180 FESASQRGCNPDCVTYCSLIDGLGKKGQVDEAYRLFEKMLDAGHNANPVVYTSLIRNFFI 239
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
GR +D ++IF+++ ++G P++ NT + E E + + + PD +
Sbjct: 240 HGRKEDGHKIFKELIRRGCKPDLTLLNTYMDCVFKAGEVEKGRMIFEDIRSYGFLPDVRS 299
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y+ L+ + + + + + M + ++DA Y ++V G +SGK+ A EEM
Sbjct: 300 YSILIHGLTKAGQARETSNIFHAMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMK 359
Query: 504 SKGIVPYHSTYKMLEEKLEK 523
K + P +TY + + L K
Sbjct: 360 EKCVQPTVATYGAIVDGLAK 379
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 119/241 (49%), Gaps = 2/241 (0%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A Q G+ YN +VD KS K +E+++EM E ++AT I+ L +
Sbjct: 322 AMKQQGFALDARAYNAVVDGFCKSGKVHKAYEILEEMKE-KCVQPTVATYGAIVDGLAKI 380
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIF 269
R D+A F K G+E + S L+D K ++ AY + E K + + +
Sbjct: 381 DRLDEAYMLFEEAKSKGIELNVVLYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 440
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N L+ K ++++A + M + P+ +Y+ I CR + + K ++MQ+
Sbjct: 441 NSLLDALVKAEEINEALVCFQSMKEMKCPPNTYTYSILINGLCRVQKYNKAFVFWQDMQK 500
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+G P+V+TYT ++ L K I +A ++E+ K++ +PD + +++LI +S A R +
Sbjct: 501 QGLVPNVVTYTTMISGLAKVGNITDAYSLFERFKANGGIPDAASFNALIEGMSNANRAME 560
Query: 390 A 390
A
Sbjct: 561 A 561
>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
Length = 628
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 192/406 (47%), Gaps = 28/406 (6%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM 187
++V + LR ++ F W Q GY H+ YN +D L K+ L +E ++M
Sbjct: 6 TVVGEVLRHLGK-ISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64
Query: 188 DELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
GY T S ++R L + G D A E +++ GV+ + SV++D K +
Sbjct: 65 Q--RRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKAS 122
Query: 247 SVEHAYKVFLEFKD---CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
V+ A ++F C+P FN L+ G C ++ +A + M + G P+V+S
Sbjct: 123 RVDDALEIFKTMSSGGGCVP-DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVIS 181
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y+ ++ C+ + +EM EK C P ++ YT + L KA ++ EA KM
Sbjct: 182 YSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMV 241
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDA-NEIFEDMKKQGVV----------------PNV 406
+ D +S++I IL K G ++A N++ E + + G++ P+
Sbjct: 242 TKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSA 301
Query: 407 LTYNTMISSACARSEEENALKLLQK---MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
+NT+I + C + + L Q+ M+E C P+ ETY ++ C+ K++ L
Sbjct: 302 ELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQEL 361
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ M +S D TY++LV GL + GKL+ AC EEM +G+ P
Sbjct: 362 VNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFP 407
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 181/387 (46%), Gaps = 37/387 (9%)
Query: 164 YNTMVDVLGKSKKF---CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
Y+T++D L K+ + C +WE EM E + L ++ + L + R +A +
Sbjct: 182 YSTLLDGLCKAGRLDEACRLWE---EMVE-KSCVPDLVAYTSFVTGLCKANRVAEACDCC 237
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--------------FKDCI---- 262
R M G + D A S ++ L K E A +E F++ I
Sbjct: 238 RKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNH 297
Query: 263 PLSSQIFNILIHGWCKTRKVDDA------QKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
P S+++FN LIH CK++++ D K+MKE + P++ +Y +++ C+ K
Sbjct: 298 PPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFY---CPPNLETYNIMVDNLCKAKQ 354
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + + EM G P V+TY+ ++ L K +++ A + E+M + PD+ +S
Sbjct: 355 LDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDAS 414
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
++ LSKAG+V A E MK +G P+++TYNT++ C + A+ L KM
Sbjct: 415 ILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAK 474
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C PD +Y ++ CR + + + M K V D Y SL+ GL +G +LA
Sbjct: 475 CTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLAL 534
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ + K P +KM+ + L K
Sbjct: 535 ELLKTSLCK---PDFVMHKMVLDGLCK 558
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 124/247 (50%), Gaps = 3/247 (1%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q+G+ V +Y CF++ + + + ++MQ +G P TY+IV+ L KA +++
Sbjct: 31 QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK-QGVVPNVLTYNTM 412
+A ++ +++ + YS +I KA RV DA EIF+ M G VP+V+T+N++
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSL 150
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
+ C+ A L + M + C+P+ +Y+ LL C+ R+ L M +
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKER 532
D Y S V GL ++ ++ AC +M++KG + + L KK G+A+E
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKK--GHAEEA 268
Query: 533 INKLLAH 539
N+++ H
Sbjct: 269 QNQMIEH 275
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 121/257 (47%), Gaps = 9/257 (3%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
E YN MVD L K+K+ ELV EM N G + T S ++ L + G+ D A +
Sbjct: 340 ETYNIMVDNLCKAKQLDEAQELVNEM--ANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCK 278
M K GV D+ + +++ L K V++A ++ + P +N L+ G CK
Sbjct: 398 EEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP-DLVTYNTLLDGLCK 456
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
++D+A + +M +PDV SYT I CR +EM ++G P +
Sbjct: 457 AGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVL 516
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ L + + AL E +K+ C PD + ++ L KAG+ +DA E+ E M
Sbjct: 517 YHSLLDGLARNGLEDLAL---ELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMA 573
Query: 399 KQGVVPNVLTYNTMISS 415
G + TY +++S
Sbjct: 574 DAGFPADAFTYISVVSG 590
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 165 bits (418), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 191/375 (50%), Gaps = 5/375 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
+ K K++ L +MD + ++ +++ ++ L R D AV M K G++
Sbjct: 106 IAKKKQYSSAVSLCNQMDLFGVTH-NVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQP 164
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAM 289
D + L++ L ++ A +F E + I +N +I+G CK A +
Sbjct: 165 DAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVF 224
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
++M Q P+VV+Y I+ C+++ + + L EM ++G P V+TY ++H
Sbjct: 225 RKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSL 284
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
Q+NEA +++++M + +PDT ++ L+ L K G V +A + E M ++G PN TY
Sbjct: 285 GQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTY 344
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N ++ C ++ + A+K+L M C P+ +Y L+ C+ KRM LL+ M +
Sbjct: 345 NALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSE 404
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNA 529
+++ D TY++L++GL + G+ A + F+EM S G++P Y +L + K G+
Sbjct: 405 KNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKH--GHL 462
Query: 530 KERINKLLAHAKEQK 544
E + KLL E++
Sbjct: 463 DEAL-KLLKEMHERR 476
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 188/363 (51%), Gaps = 6/363 (1%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
H P + YNT+++ L K+ + + ++M++ N G ++ T +TI+ L + ++A
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQ-NRGKPNVVTYNTIIDSLCKDRLVNEA 255
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIH 274
VE M G+ D + ++ + A ++F E ++ +P + FNIL+
Sbjct: 256 VEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMP-DTVTFNILVD 314
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G CK V +A+ + M ++G P+ +Y ++ YC + L M KGC P
Sbjct: 315 GLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAP 374
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
++ +Y I+++ K+K++NEA ++ +M + PDT YS+L+ L + GR ++A +F
Sbjct: 375 NLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLF 434
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M G++P+++ Y+ ++ C + ALKLL++M E KP+ Y L++
Sbjct: 435 KEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIA 494
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+++V L + + + + D TY +++GL++ G + A FF +M G +P +Y
Sbjct: 495 GKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSY 554
Query: 515 KML 517
++
Sbjct: 555 NVI 557
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 227/499 (45%), Gaps = 25/499 (5%)
Query: 39 SPSSTESPSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVD 98
+ + TE PSLP F S + ++ + +L + R+N + + +
Sbjct: 51 TSACTEKPSLPQKHCGFGSNTSNDISIDDALTSFYRMVRMNPRPSVVE------FGKFLG 104
Query: 99 KISKILSKQYQSPDKVVEALKGCGVS---VSNSLVEQTLRRFSNDLTPAFGFFTWAKT-Q 154
I+K KQY S + + GV+ S +++ L R S+ F K +
Sbjct: 105 SIAK--KKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSH---VDFAVSVMGKMFK 159
Query: 155 TGYMHTPEMYNTMVDVL---GKSKK-FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
G +NT+++ L GK K+ L E+V E N + + +T++ L +
Sbjct: 160 LGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPN-----VISYNTVINGLCKN 214
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIF 269
G AV FR M++ + + + ++D+L K V A + E D IP +
Sbjct: 215 GNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTY 274
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N ++HG+C ++++A + KEM + PD V++ ++ C+E + + M E
Sbjct: 275 NTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTE 334
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
KG +P+ TY +M Q++EA+KV M C P+ S Y+ LI K+ R+ +
Sbjct: 335 KGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNE 394
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A + +M ++ + P+ +TY+T++ C AL L ++M PD Y+ LL
Sbjct: 395 AKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLD 454
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ + LL M + + + Y L+RG+ +GKLE+A F ++ + GI P
Sbjct: 455 GFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRP 514
Query: 510 YHSTYKMLEEKLEKKRLGN 528
TY ++ + L K+ L +
Sbjct: 515 DIWTYNVMIKGLLKEGLSD 533
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 172/360 (47%), Gaps = 45/360 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFR 221
YNT++D L K + L+ E V+ + E+ + + + T +TI+ G+ ++A F+
Sbjct: 239 YNTIIDSLCKDR---LVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFK 295
Query: 222 GMKKYGVEKDTRALSVLMDTLVK-----------------------------------GN 246
M V DT ++L+D L K N
Sbjct: 296 EMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHN 355
Query: 247 SVEHAYKVF--LEFKDCIP-LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
++ A KV + K C P LSS +NILI+G+CK++++++A++ + EM ++ +PD V+
Sbjct: 356 QMDEAIKVLGIMIGKGCAPNLSS--YNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVT 413
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y+ ++ C+ R+ + KEM G P ++ Y+I++ K ++EALK+ ++M
Sbjct: 414 YSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMH 473
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
P+ Y+ LI + AG+++ A E+F + G+ P++ TYN MI +
Sbjct: 474 ERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSD 533
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A + +KME+D PD +Y +++ + + L+ M S D+ T+ L+
Sbjct: 534 EAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 121/450 (26%), Positives = 207/450 (46%), Gaps = 45/450 (10%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM 187
++V Q+L R + + A F + G T YNT+++ L KS + EL +E+
Sbjct: 49 NIVLQSLCR-AGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEEL 107
Query: 188 DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS 247
+ + + + T +T++ L + G ++A GM G + SVL++ L K
Sbjct: 108 VKRGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGR 166
Query: 248 VEHAYKVFLEF--KDCIPLSSQI------------------------------------- 268
++ A ++ E K C L + I
Sbjct: 167 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 226
Query: 269 -FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
F+ LI G CK + D+A +M G+ P+VV+Y + C+ + ++ M
Sbjct: 227 TFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESM 284
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+KG P VITY++++ A KA +++EAL++ M S C P+ ++S+I L K+ R
Sbjct: 285 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 344
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+A +I + + +VP+ +T+N +I+ AC E A L ++M +PD T+ L
Sbjct: 345 GEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGAL 404
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C+ +++ +L M V + TY LV GL +SG++E C F EEM+S G
Sbjct: 405 IDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGC 464
Query: 508 VPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
VP TY L L R +A + ++KL
Sbjct: 465 VPESMTYGSLVYALCRASRTDDALQLVSKL 494
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 185/418 (44%), Gaps = 48/418 (11%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM-----DELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
Y+ +++ L K + EL++EM D L N + T ++ + L + +A E
Sbjct: 154 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPN----IITYNSFLDGLCKQSMTAEACE 209
Query: 219 AFRGMKKYG--VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
R ++ V DT S L+D L K + A + +P + +N L++G
Sbjct: 210 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVP-NVVTYNALVNGL 268
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK K++ A ++ M +G +PDV++Y+ ++ +C+ + + L M +GC P+V
Sbjct: 269 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNV 328
Query: 337 ITYTIVMHALGKAKQINEALKV-----------------------------------YEK 361
+T+ ++ L K+ + EA ++ +E+
Sbjct: 329 VTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEE 388
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M + + PD + +LI L KAG+V+ A +I + M GV PNV+TYN ++ C
Sbjct: 389 MVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGR 448
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
E + L++M C P+ TY L+ CR R L++ + D TY
Sbjct: 449 IEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNI 508
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLA 538
LV GL +SGK E A + EEM+ KG P T+ L + L E + +LA
Sbjct: 509 LVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLA 566
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 169/353 (47%), Gaps = 8/353 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
++T++D L K C + D + GYV ++ T + ++ L + + + A
Sbjct: 228 FSTLIDGLCK----CGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIES 283
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M GV D SVL+D K + V+ A ++ + + C P + FN +I G CK+
Sbjct: 284 MVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTP-NVVTFNSIIDGLCKSD 342
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ +A + +++ + PD V++ I C+ +F + +EM K +P V+T+
Sbjct: 343 RSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFG 402
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L KA Q+ A + + M + P+ Y+ L+ L K+GR+++ E E+M
Sbjct: 403 ALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSS 462
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G VP +TY +++ + C S ++AL+L+ K++ PD TY L+ + + +
Sbjct: 463 GCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQA 522
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+L M D+ T+A+ GL SG L +++KG++P +T
Sbjct: 523 ITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATT 575
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 174/396 (43%), Gaps = 81/396 (20%)
Query: 223 MKKYGVEKDTRALS---VLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILIHGWC 277
+K + V +R+++ +++ +L + A ++F +D + + +N +I+G C
Sbjct: 33 LKFFFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLC 92
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K+ ++ + +E+ ++G PDVV+Y I+ C+ D + M +GC P+V+
Sbjct: 93 KSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVV 152
Query: 338 TYTIVMHALGKAKQINEALKVYEKM--KSDDCL--------------------------- 368
TY+++++ L K +I+EA ++ ++M KS D L
Sbjct: 153 TYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMR 212
Query: 369 ----------PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
PDT +S+LI L K G+ +A +DM G VPNV+TYN +++ C
Sbjct: 213 SLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCK 270
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK-------------------V 459
+ E A +++ M + PD TY+ L+ C+ R+
Sbjct: 271 ADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVT 330
Query: 460 LNFLLTHMFKNDVSMDA----------------GTYASLVRGLIESGKLELACSFFEEMI 503
N ++ + K+D S +A T+ L+ G ++G E A + FEEM+
Sbjct: 331 FNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMV 390
Query: 504 SKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
+K + P T+ L + L K A I L+ +
Sbjct: 391 AKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 426
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 142/330 (43%), Gaps = 39/330 (11%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYD 214
GY+ YN +V+ L K+ K +++ M ++ G + T S ++ + R D
Sbjct: 253 GYVPNVVTYNALVNGLCKADKMERAHAMIESM--VDKGVTPDVITYSVLVDAFCKASRVD 310
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILI 273
+A+E GM G + + ++D L K + A+++ L+ + + + ++ FNILI
Sbjct: 311 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILI 370
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL--------- 324
G CK + A +EM + PDV+++ I+ C+ D L
Sbjct: 371 AGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 430
Query: 325 --------------------------KEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
+EM GC P +TY +++AL +A + ++AL++
Sbjct: 431 PNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQL 490
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
K+KS PDT Y+ L+ L K+G+ + A + E+M +G P+ T+
Sbjct: 491 VSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHR 550
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLL 448
++LL+ + PD T + +L
Sbjct: 551 SGNLAGTMELLRVVLAKGMLPDATTCSSIL 580
>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
Length = 628
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 192/406 (47%), Gaps = 28/406 (6%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM 187
++V + LR ++ F W Q GY H+ YN +D L K+ L +E ++M
Sbjct: 6 TVVGEVLRHLGK-ISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQM 64
Query: 188 DELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
GY T S ++R L + G D A E +++ GV+ + SV++D K +
Sbjct: 65 QR--RGYPPDDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKAS 122
Query: 247 SVEHAYKVFLEFK---DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
V+ A ++F C+P FN L+ G C ++ +A + M + G P+V+S
Sbjct: 123 RVDDALEIFKTMSAGGGCVP-DVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVIS 181
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y+ ++ C+ + +EM EK C P ++ YT + L KA ++ EA KM
Sbjct: 182 YSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMV 241
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDA-NEIFEDMKKQGVV----------------PNV 406
+ D +S++I IL K G ++A N++ E + + G++ P+
Sbjct: 242 TKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSA 301
Query: 407 LTYNTMISSACARSEEENALKLLQK---MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
+NT+I + C + + L Q+ M+E C P+ ETY ++ C+ K++ L
Sbjct: 302 ELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQEL 361
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ M +S D TY++LV GL + GKL+ AC EEM +G+ P
Sbjct: 362 VNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFP 407
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 200/440 (45%), Gaps = 42/440 (9%)
Query: 113 KVVEALKGC--GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
K + A GC V NSL++ ++ AF F + + G Y+T++D
Sbjct: 132 KTMSAGGGCVPDVVTFNSLLKGLCS--GERMSEAFVLFEYM-AKAGCEPNVISYSTLLDG 188
Query: 171 LGKSKKF---CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG 227
L K+ + C +WE EM E + L ++ + L + R +A + R M G
Sbjct: 189 LCKAGRLDEACRLWE---EMVE-KSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKG 244
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLE--------------FKDCI----PLSSQIF 269
+ D A S ++ L K E A +E F++ I P S+++F
Sbjct: 245 SKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELF 304
Query: 270 NILIHGWCKTRKVDDA------QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
N LIH CK++++ D K+MKE + P++ +Y +++ C+ K + +
Sbjct: 305 NTLIHAVCKSKRLPDGVLLFQRMKSMKEFY---CPPNLETYNIMVDNLCKAKQLDEAQEL 361
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+ EM G P V+TY+ ++ L K +++ A + E+M + PD+ +S++ LSK
Sbjct: 362 VNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSK 421
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
AG+V A E MK +G P+++TYNT++ C + A+ L KM C PD +
Sbjct: 422 AGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFS 481
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y ++ CR + + + M K V D Y SL+ GL +G +LA + +
Sbjct: 482 YTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL 541
Query: 504 SKGIVPYHSTYKMLEEKLEK 523
K P +KM+ + L K
Sbjct: 542 CK---PDFVMHKMVVDGLCK 558
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 124/247 (50%), Gaps = 3/247 (1%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q+G+ V +Y CF++ + + + ++MQ +G P TY+IV+ L KA +++
Sbjct: 31 QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK-QGVVPNVLTYNTM 412
+A ++ +++ + YS +I KA RV DA EIF+ M G VP+V+T+N++
Sbjct: 91 KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
+ C+ A L + M + C+P+ +Y+ LL C+ R+ L M +
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKER 532
D Y S V GL ++ ++ AC +M++KG + + L KK G+A+E
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKK--GHAEEA 268
Query: 533 INKLLAH 539
N+++ H
Sbjct: 269 QNQMIEH 275
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 119/255 (46%), Gaps = 9/255 (3%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
E YN MVD L K+K+ ELV EM N G + T S ++ L + G+ D A +
Sbjct: 340 ETYNIMVDNLCKAKQLDEAQELVNEM--ANYGLSPDVVTYSALVDGLCKLGKLDRACDLL 397
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCK 278
M K GV D+ + +++ L K V++A ++ + P +N L+ G CK
Sbjct: 398 EEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTP-DLVTYNTLLDGLCK 456
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
++D+A + +M +PDV SYT I CR +EM ++G P +
Sbjct: 457 AGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVL 516
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ L + + AL E +K+ C PD + ++ L KAG+ +DA E+ E M
Sbjct: 517 YHSLLDGLARNGLEDLAL---ELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMA 573
Query: 399 KQGVVPNVLTYNTMI 413
G + TY ++
Sbjct: 574 DAGFPADAFTYINVV 588
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 124/429 (28%), Positives = 197/429 (45%), Gaps = 18/429 (4%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM 187
++V Q+L R + D A F + G T YNT+++ L KS EL +E+
Sbjct: 5 NIVLQSLCR-AGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63
Query: 188 DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS 247
E + + + T +T++ L + G ++A M G + SVL++ L K
Sbjct: 64 VERGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGR 122
Query: 248 VEHAYKVFLEF--KDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGF--SPDVV 302
++ A ++ E K C L + I +N + G CK +A + M+ + SPD V
Sbjct: 123 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 182
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+++ I+ C+ + +M G P+VITY +++ L KA ++ A + E M
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL-----TYNTMISSAC 417
PD YS L+ KA RV +A E+ M +G PNVL T+N +I+ AC
Sbjct: 243 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGAC 302
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E A L ++M +PD T+ L+ C+ +++ +L M V +
Sbjct: 303 KAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 362
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
TY +LV GL +SG++E AC F EEM+S G VP TY L L + R + L
Sbjct: 363 TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCR------ASRTDDAL 416
Query: 538 AHAKEQKTF 546
E K+F
Sbjct: 417 QLVSELKSF 425
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/389 (29%), Positives = 187/389 (48%), Gaps = 18/389 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM-----DELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
Y+ +++ L K + EL++EM D L N + T ++ + L + +A E
Sbjct: 110 YSVLINGLCKVGRIDEARELIQEMTRKSCDVLPN----IITYNSFLDGLCKQSMTAEACE 165
Query: 219 AFRGMKKYG--VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHG 275
R ++ V DT S L+D L K ++ A VF + + + I +N L++G
Sbjct: 166 LMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNG 225
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
CK K++ A ++ M +G +PDV++Y+ ++ +C+ + + L M +GC P+
Sbjct: 226 LCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 285
Query: 336 V-----ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
V +T+ I++ KA +A ++E+M + + PD + +LI L KAG+V+ A
Sbjct: 286 VLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAA 345
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+I + M GV PNV+TYN ++ C E A + L++M C PD TY L+
Sbjct: 346 RDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYA 405
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
CR R L++ + D TY LV GL +SGK E A + EEM+ KG P
Sbjct: 406 LCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPD 465
Query: 511 HSTYKMLEEKLEKK-RLGNAKERINKLLA 538
T+ L + L E + +LA
Sbjct: 466 SFTFAACFSGLHRSGNLAGTMELLRVVLA 494
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 163/340 (47%), Gaps = 15/340 (4%)
Query: 164 YNTMVDVL---GKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEA 219
++T++D L G+ + C +++ D + GYV ++ T + ++ L + + + A
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFD-----DMIAGGYVPNVITYNALVNGLCKADKMERAHAM 238
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIP----LSSQIFNILI 273
M GV D SVL+D K + V+ A ++ + + C P FNILI
Sbjct: 239 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILI 298
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G CK + A +EM + PDV+++ I+ C+ D L M G
Sbjct: 299 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 358
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+V+TY ++H L K+ +I EA + E+M S C+PD+ Y SL++ L +A R DA ++
Sbjct: 359 PNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQL 418
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
++K G P+ +TYN ++ + E A+ +L++M +PD T+A R
Sbjct: 419 VSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHR 478
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+ LL + + DA T +S++ + SGKL+
Sbjct: 479 SGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLD 518
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 176/360 (48%), Gaps = 13/360 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA----TMSTIMRRLVRGGRYDDAVEA 219
YN+ +D L K + E + M L +G + ++ T ST++ L + G+ D+A
Sbjct: 147 YNSFLDGLCKQS---MTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSV 203
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCK 278
F M G + + L++ L K + +E A+ + D + +++L+ +CK
Sbjct: 204 FDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 263
Query: 279 TRKVDDAQKAMKEMFQQGFSPDV-----VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+VD+A + + M +G +P+V V++ I C+ +F + +EM K +
Sbjct: 264 ASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQ 323
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P V+T+ ++ L KA Q+ A + + M + P+ Y++L+ L K+GR+++A +
Sbjct: 324 PDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQF 383
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
E+M G VP+ +TY +++ + C S ++AL+L+ +++ PD TY L+ +
Sbjct: 384 LEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWK 443
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+ + +L M D+ T+A+ GL SG L +++KG++P +T
Sbjct: 444 SGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATT 503
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 118/228 (51%), Gaps = 5/228 (2%)
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLK-EMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
V Y ++ CR D + + + EM G P+++TY +++ L K+ + ++++
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
E++ PD Y++LI L KAG +++A + DM +G VPNV+TY+ +I+ C
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 420 SEEENALKLLQKMEEDLCK--PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND--VSMD 475
+ A +L+Q+M C P+ TY L C++ L+ + VS D
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPD 180
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
T+++L+ GL + G+++ ACS F++MI+ G VP TY L L K
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCK 228
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 135/291 (46%), Gaps = 27/291 (9%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-----------TMSTIMRR 206
TP++ Y+ +VD K+ + V E EL +G S T + ++
Sbjct: 248 TPDVITYSVLVDAFCKASR-------VDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLS 265
+ G ++ A F M ++ D L+D L K VE A + L +P +
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+N L+HG CK+ ++++A + ++EM G PD ++Y + CR + DD L+
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRAS---RTDDALQ 417
Query: 326 ---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
E++ G P +TY I++ L K+ + +A+ V E+M PD+ +++ L
Sbjct: 418 LVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLH 477
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
++G + E+ + +G++P+ T ++++ C + ++ ++++ E
Sbjct: 478 RSGNLAGTMELLRVVLAKGMLPDATTCSSILDWVCRSGKLDDVKAMIKEFE 528
>gi|226492862|ref|NP_001141929.1| uncharacterized protein LOC100274078 [Zea mays]
gi|194706478|gb|ACF87323.1| unknown [Zea mays]
gi|414585156|tpg|DAA35727.1| TPA: hypothetical protein ZEAMMB73_571639 [Zea mays]
Length = 442
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 104/390 (26%), Positives = 190/390 (48%), Gaps = 8/390 (2%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTM---VDVLGKSKKFCLM 180
S+ S V +TL ++ND A FF W+ + G + P T+ VD+LGK +F L
Sbjct: 32 SLDASAVLKTLSLYANDWRRALDFFHWSASPAG-ANLPPTAATLARAVDILGKHFEFPLA 90
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
L+ + + + ++ RL DDA+ AF D + +L+D
Sbjct: 91 TSLLLSHHDPGDPTFLRPALRALLNRLAAANLIDDALHAFESTAASIGLCDEVSFHILVD 150
Query: 241 TLVKGNSVEHA-YKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L V+ A + F + P ++ N+L+ GW K ++ +M ++G +
Sbjct: 151 ALCDHRRVDEADHLCFGKDPPPFPPGTKTHNLLLRGWAKAHAWARLRQLWFDMDRRGVAK 210
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D+ SY+ +++ + K KEM+++G + + Y +HA+G A+ ++ A+++Y
Sbjct: 211 DLHSYSIYMDALAKSGKPWKAFKVFKEMKQRGIRIDTVAYNTAIHAVGMAQGVDSAVRLY 270
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+M C P+ + Y+++I + K GR K+ + M+K G P+VLTY+
Sbjct: 271 RQMVDAGCKPNIATYNAIIKLFCKEGRFKEGYAFVQQMRKTGCKPDVLTYHCFFQYL--- 327
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
S + L L +KM E C+P +TY L+K R ++ + + M + +S DA Y
Sbjct: 328 SRPQEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAY 387
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVP 509
+L+ L++ G ++LA + E+M++KG+ P
Sbjct: 388 NALIDALLQKGMVDLARKYDEKMLAKGLSP 417
>gi|9857539|gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thaliana]
Length = 490
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 214/426 (50%), Gaps = 10/426 (2%)
Query: 116 EALKGCGVSVSNSLVEQTLRR--FSN-DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLG 172
E+L G+ +S L+++ L+R FS+ + F+ +A G+ H+ +TM+ +LG
Sbjct: 59 ESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILG 118
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK-D 231
+++KF +WEL+ E + +S TM ++ R+ + VE+F K+ + D
Sbjct: 119 RNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFD 178
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKE 291
T + L+ TL + S+ A V+ K Q FNIL+ GW + + + + MK
Sbjct: 179 TACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMK- 237
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
+G PDVV+Y I+ YC++++ K + +M+E+ P VITYT V+ LG Q
Sbjct: 238 --GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 295
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++A +V ++MK C PD + Y++ I A R+ DA+++ ++M K+G+ PN TYN
Sbjct: 296 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 355
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
++ + +L +M + C P+ ++ L+KM R +++ + L M
Sbjct: 356 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 415
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
+ L+ L + K+E A EM+ KG P + ++K ++ +E L N +
Sbjct: 416 FGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLME---LANKHD 472
Query: 532 RINKLL 537
+N L+
Sbjct: 473 EVNNLI 478
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 6/207 (2%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP++ Y T++ LG + E++KEM E Y +A + +R R DA
Sbjct: 277 TPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYG-CYPDVAAYNAAIRNFCIARRLGDAD 335
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHG 275
+ M K G+ + ++ L N + ++++++ +C+P ++Q LI
Sbjct: 336 KLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLP-NTQSCMFLIKM 394
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+ + KVD A + ++M +GF + ++ C + + L EM EKG +PS
Sbjct: 395 FKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPS 454
Query: 336 VITYTIVMHALGKAKQINEALKVYEKM 362
+++ + + A + +E + +KM
Sbjct: 455 NVSFKRIKLLMELANKHDEVNNLIQKM 481
>gi|15217756|ref|NP_171744.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806504|sp|Q9FZ19.2|PPR5_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g02420
gi|332189307|gb|AEE27428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 214/426 (50%), Gaps = 10/426 (2%)
Query: 116 EALKGCGVSVSNSLVEQTLRR--FSN-DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLG 172
E+L G+ +S L+++ L+R FS+ + F+ +A G+ H+ +TM+ +LG
Sbjct: 60 ESLSSSGIHLSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILG 119
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK-D 231
+++KF +WEL+ E + +S TM ++ R+ + VE+F K+ + D
Sbjct: 120 RNRKFDQIWELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLVPDFFD 179
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKE 291
T + L+ TL + S+ A V+ K Q FNIL+ GW + + + + MK
Sbjct: 180 TACFNALLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSSEEAEAFFEEMK- 238
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
+G PDVV+Y I+ YC++++ K + +M+E+ P VITYT V+ LG Q
Sbjct: 239 --GKGLKPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQ 296
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++A +V ++MK C PD + Y++ I A R+ DA+++ ++M K+G+ PN TYN
Sbjct: 297 PDKAREVLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNL 356
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
++ + +L +M + C P+ ++ L+KM R +++ + L M
Sbjct: 357 FFRVLSLANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKG 416
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
+ L+ L + K+E A EM+ KG P + ++K ++ +E L N +
Sbjct: 417 FGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLME---LANKHD 473
Query: 532 RINKLL 537
+N L+
Sbjct: 474 EVNNLI 479
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 94/207 (45%), Gaps = 6/207 (2%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP++ Y T++ LG + E++KEM E Y +A + +R R DA
Sbjct: 278 TPDVITYTTVIGGLGLIGQPDKAREVLKEMKEYG-CYPDVAAYNAAIRNFCIARRLGDAD 336
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHG 275
+ M K G+ + ++ L N + ++++++ +C+P ++Q LI
Sbjct: 337 KLVDEMVKKGLSPNATTYNLFFRVLSLANDLGRSWELYVRMLGNECLP-NTQSCMFLIKM 395
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+ + KVD A + ++M +GF + ++ C + + L EM EKG +PS
Sbjct: 396 FKRHEKVDMAMRLWEDMVVKGFGSYSLVSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPS 455
Query: 336 VITYTIVMHALGKAKQINEALKVYEKM 362
+++ + + A + +E + +KM
Sbjct: 456 NVSFKRIKLLMELANKHDEVNNLIQKM 482
>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
gi|224030695|gb|ACN34423.1| unknown [Zea mays]
gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
Length = 756
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 112/421 (26%), Positives = 202/421 (47%), Gaps = 11/421 (2%)
Query: 122 GVSVSNSLVEQ--TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCL 179
G V S VE LRRF + A G +YN +++VL + + L
Sbjct: 123 GAGVVRSFVESYARLRRFDD----AVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKL 178
Query: 180 MWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+ + EM + + T++T+++ L R + AV M + V D + LM
Sbjct: 179 LESVYNEMTD-RGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLM 237
Query: 240 DTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
++ S+E A +V + + C P + N+LI+G+CK +V+DA +++ GF
Sbjct: 238 QGFIEEGSIEAALRVKTKMMETGCSPTRVTV-NVLINGYCKMGRVEDALGYIQKEIADGF 296
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
PD V+Y F+ C+ + M ++G P V TY V++ L K +++EA
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKG 356
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ +M CLPDT+ +++LI L R+++A ++ ++ +G+ P+V T+N +I++ C
Sbjct: 357 IVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 416
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
+ ++L ++M+ C PD TY L+ C ++ LL M N
Sbjct: 417 KVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTV 476
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
TY +++ L + ++E A F++M + GI T+ L + L K KR+ +A E I ++
Sbjct: 477 TYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQM 536
Query: 537 L 537
+
Sbjct: 537 V 537
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 181/369 (49%), Gaps = 9/369 (2%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDD 215
H P++ YNT+++ L K+ + +V +M ++ G + T +T++ L R ++
Sbjct: 331 HDPDVFTYNTVINCLSKNGELDEAKGIVNQM--VDRGCLPDTTTFNTLIVALCSQNRLEE 388
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILI 273
A++ R + G+ D ++L++ L K ++F E K C P +NILI
Sbjct: 389 ALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAP-DEVTYNILI 447
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
C K+ +A +KEM G V+Y I+ C++ + ++ +M G
Sbjct: 448 DHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGIS 507
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
S +T+ ++ L KAK+I++A ++ E+M + P Y+S++ K G +K A +I
Sbjct: 508 RSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADI 567
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
E M G +V+TY T+I+ C + ALKLL+ M +P + Y P+++ R
Sbjct: 568 LETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFR 627
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK-LELACSFFEEMISKGIVPYHS 512
+ ++ L M + DA TY + RGL G ++ A F EM++KG +P S
Sbjct: 628 RNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFS 687
Query: 513 TYKMLEEKL 521
+++ML E L
Sbjct: 688 SFRMLAEGL 696
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 164/328 (50%), Gaps = 3/328 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T + L + G A++ M + G + D + +++ L K ++ A + +
Sbjct: 302 TYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQM 361
Query: 259 KD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
D C+P + FN LI C ++++A +E+ +G SPDV ++ I C+ D
Sbjct: 362 VDRGCLP-DTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGD 420
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+EM+ GC P +TY I++ L ++ AL + ++M+S+ C T Y++
Sbjct: 421 PHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNT 480
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L K R+++A E+F+ M G+ + +T+NT+I C ++A +L+++M ++
Sbjct: 481 IIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEG 540
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+P TY +L C++ +K +L M N +D TY +L+ GL ++G+ ++A
Sbjct: 541 LQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVAL 600
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M KGI P Y + + L ++
Sbjct: 601 KLLRGMRIKGIRPTPKAYNPVIQSLFRR 628
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 184/395 (46%), Gaps = 17/395 (4%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVK----------------EMDEL 190
FF W TQ + + Y TM L K L++ + E
Sbjct: 89 FFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEA 148
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
+ S S +M G + DA++ FR ++K+ ++ + L D L+K N
Sbjct: 149 RGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSP 208
Query: 251 AYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
A+ + E DC P FN+L+H CK K+++AQ E+ ++G P VVS+ I
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
YC+ + + + M E P V TY+++++ L K Q+++A K++ +M +P
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ +++LI GR EI++ M ++GV P+V+TYNT+I+ C + A KL+
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M + KPD TY L+ CC++ ++ + M K + +D + +L+ G
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCRE 448
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
G++ A EM+ GI P +TY M+ KK
Sbjct: 449 GQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKK 483
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 146/298 (48%), Gaps = 3/298 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ + +T++ + G D R M + V D SVL++ L K ++ A K+F
Sbjct: 259 TVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLF 318
Query: 256 LEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
LE D +P + F LI+G C T + D + ++M ++G PDV++Y I C+
Sbjct: 319 LEMCDRGLVP-NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D R+ + EM ++G KP TYT+++ K + AL++ ++M + D
Sbjct: 378 VGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+++LI + G+V +A +M + G+ P+ TY +I C + + + KLL++M+
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQ 497
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
D P TY LL C++ +MK N LL M V D TY L+ +++ K
Sbjct: 498 CDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQAWK 555
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 168/343 (48%), Gaps = 6/343 (1%)
Query: 181 WELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
W +E+ L+ GY + + +M RL + + ++A F + K G+ + + L+
Sbjct: 210 WAFYEEI--LDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLI 267
Query: 240 DTLVKGNSVEHAYKV--FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
+ K +++ +++ F+ P +++LI+G CK ++DDA K EM +G
Sbjct: 268 NGYCKSGNLDQGFRLKRFMMENRVFP-DVFTYSVLINGLCKEGQLDDANKLFLEMCDRGL 326
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
P+ V++T I +C + ++M KG KP VITY +++ L K + EA K
Sbjct: 327 VPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKK 386
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ +M PD Y+ LI K G ++ A EI ++M K+G+ + + + +IS C
Sbjct: 387 LVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFC 446
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
+ A + L++M E KPD TY ++ C+K +K LL M +
Sbjct: 447 REGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVV 506
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
TY L+ GL + G+++ A + M++ G+VP TY +L E+
Sbjct: 507 TYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLER 549
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 165 bits (417), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 108/395 (27%), Positives = 184/395 (46%), Gaps = 17/395 (4%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVK----------------EMDEL 190
FF W TQ + + Y TM L K L++ + E
Sbjct: 89 FFKWLSTQHHFRLSIHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEA 148
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
+ S S +M G + DA++ FR ++K+ ++ + L D L+K N
Sbjct: 149 RGTHQSNLVFSVLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSP 208
Query: 251 AYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
A+ + E DC P FN+L+H CK K+++AQ E+ ++G P VVS+ I
Sbjct: 209 AWAFYEEILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLIN 268
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
YC+ + + + M E P V TY+++++ L K Q+++A K++ +M +P
Sbjct: 269 GYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVP 328
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ +++LI GR EI++ M ++GV P+V+TYNT+I+ C + A KL+
Sbjct: 329 NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLV 388
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M + KPD TY L+ CC++ ++ + M K + +D + +L+ G
Sbjct: 389 IEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCRE 448
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
G++ A EM+ GI P +TY M+ KK
Sbjct: 449 GQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKK 483
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 158/330 (47%), Gaps = 6/330 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ + +T++ + G D R M + V D SVL++ L K ++ A K+F
Sbjct: 259 TVVSFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLF 318
Query: 256 LEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
LE D +P + F LI+G C T + D + ++M ++G PDV++Y I C+
Sbjct: 319 LEMCDRGLVP-NDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCK 377
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D R+ + EM ++G KP TYT+++ K + AL++ ++M + D
Sbjct: 378 VGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVA 437
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+++LI + G+V +A +M + G+ P+ TY +I C + + + KLL++M+
Sbjct: 438 FTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQ 497
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
D P TY LL C++ +MK N LL M V D TY L+ G + G E
Sbjct: 498 CDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHGNRE 557
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
F + KG+V + +Y L L K
Sbjct: 558 ---DFDKLQSEKGLVQDYGSYTSLIGDLRK 584
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 197/383 (51%), Gaps = 8/383 (2%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE-LVKEMDELNNGYVSL 197
N + A AK+ G+M YN ++D + ++K+ + E + KEM E + ++
Sbjct: 146 NLINKALSIVNLAKSY-GFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVE-SGVSPNV 203
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
T + ++R G + + F M++ G + + ++D K + A+K+
Sbjct: 204 YTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRL 263
Query: 256 LEFKDCIP-LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ K P L S +N++I+G C+ ++ + + ++EM ++ + PD V++ I YC
Sbjct: 264 MALKGLNPNLIS--YNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNV 321
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+F + EM + G P+V+TYT +++++ KA +N A++ ++M+ P+ Y
Sbjct: 322 GNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTY 381
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI S+ G +K A +I ++M + G P ++TYN +I+ C E+A LLQ+M E
Sbjct: 382 TTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIE 441
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD +Y+ ++ CR + ++ L M +S D TY+SL++GL + +L
Sbjct: 442 RGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGE 501
Query: 495 ACSFFEEMISKGIVPYHSTYKML 517
C F+EM+S G+ P TY L
Sbjct: 502 VCDLFQEMLSLGLPPDEVTYTSL 524
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 198/419 (47%), Gaps = 7/419 (1%)
Query: 122 GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
GV N++++ +R + A G F ++G YN ++ + +
Sbjct: 166 GVLSYNAILDAVIRT-KQSVKIAEGIFK-EMVESGVSPNVYTYNILIRGFCTAGNLEMGL 223
Query: 182 ELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
EM E N ++ T +TI+ + + +A + R M G+ + + +V+++
Sbjct: 224 FFFGEM-ERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282
Query: 242 LVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L + ++ ++ E + +P FN LI+G+C A EM + G SP
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVP-DRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSP 341
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+VV+YT I C+ + + + L +M+++G P+ TYT ++ + + +A ++
Sbjct: 342 NVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIM 401
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
++M + P Y++LI GR++DA+ + ++M ++G +P+V++Y+T+IS C
Sbjct: 402 KEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRN 461
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
E E A +L +M PD TY+ L++ C+++R+ + L M + D TY
Sbjct: 462 QELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLL 537
SL+ G L+ A +EMI KG P TY +L K+ R AK + KLL
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLL 580
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 181/375 (48%), Gaps = 19/375 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
+NT+++ F L EM + NG ++ T +T++ + + G + A+E
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEM--VKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQ 368
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M+ G+ + R + L+D + ++ AY++ E ++ + +N LI+G C +
Sbjct: 369 MRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGR 428
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++DA ++EM ++GF PDVVSY+ I +CR ++ K EM KG P V TY+
Sbjct: 429 MEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSS 488
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K +++ E ++++M S PD Y+SLI G + A + ++M ++G
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC---------- 451
P+++TYN +I+ +S + A +LL K+ + P+ TY L+ C
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALA 608
Query: 452 -----CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
C K M + +L M + ++ Y ++ G + G +E A + ++EM+ G
Sbjct: 609 LMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSG 668
Query: 507 IVPYHSTYKMLEEKL 521
P+ T L + L
Sbjct: 669 FAPHSVTIMALAKSL 683
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV-DDT 323
SS +F++++ + ++ A + GF P V+SY ++ R K K+ +
Sbjct: 131 SSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGI 190
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
KEM E G P+V TY I++ A + L + +M+ + CLP+ Y+++I K
Sbjct: 191 FKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCK 250
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
++ +A ++ M +G+ PN+++YN +I+ C + + ++L++M + PD T
Sbjct: 251 LRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVT 310
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
+ L+ C L M KN +S + TY +L+ + ++G L A F ++M
Sbjct: 311 FNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMR 370
Query: 504 SKGIVPYHSTYKMLEEKLEKK 524
+G+ P TY L + ++
Sbjct: 371 DRGLHPNGRTYTTLIDGFSQQ 391
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 1/187 (0%)
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI-FILSKAGRVKDA 390
CK S + +V+ + + IN+AL + KS +P Y++++ ++ VK A
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
IF++M + GV PNV TYN +I C E L +ME + C P+ TY ++
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDA 247
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ +++ LL M ++ + +Y ++ GL G+++ EEM + VP
Sbjct: 248 YCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPD 307
Query: 511 HSTYKML 517
T+ L
Sbjct: 308 RVTFNTL 314
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 113/298 (37%), Gaps = 60/298 (20%)
Query: 153 TQTGYMHTPEMYNTMVD---VLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLV 208
+ G+ T YN +++ +LG+ + L++EM E G++ + + STI+
Sbjct: 405 VENGFTPTIITYNALINGHCILGRMED---ASGLLQEMIE--RGFIPDVVSYSTIISGFC 459
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQ 267
R + A + M G+ D S L+ L K + +F E +P
Sbjct: 460 RNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEV 519
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY---------------- 311
+ LI+ +C +D A + EM Q+GFSPD+V+Y I +
Sbjct: 520 TYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKL 579
Query: 312 ------------------CREKDFR----------------KVDDTLKEMQEKGCKPSVI 337
C +F+ + D L+ M +KG K +
Sbjct: 580 LYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEE 639
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
Y +++H K I +A +Y++M P + +L L G+ + N++ +
Sbjct: 640 VYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLD 697
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 412 MISSACARSEEEN-ALKLLQKMEEDLCKPDCETYAPLLKMCCR-KKRMKVLNFLLTHMFK 469
++ +CAR N AL ++ + P +Y +L R K+ +K+ + M +
Sbjct: 137 LVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVE 196
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGN 528
+ VS + TY L+RG +G LE+ FF EM G +P TY +++ + +++G
Sbjct: 197 SGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGE 256
Query: 529 A 529
A
Sbjct: 257 A 257
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 200/436 (45%), Gaps = 65/436 (14%)
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
+L F+ D A FF W + G+ H Y++M+++L +++ + ++ M +
Sbjct: 73 SLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIK--- 129
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG---VEKDTRALSVLMDTLVKGNSVE 249
S ++ ++ L E FR M G + R + ++ +L K ++
Sbjct: 130 ---SCCSIEDVLFVL----------EVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLID 176
Query: 250 HAYKVFLEFKDCIPLSSQI------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
V+LE L++QI FN +++G+CK V +A+ ++ Q G PD +
Sbjct: 177 EMKTVYLEL-----LNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFT 231
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
YT I +CR K + M +KGC+ + ++YT ++H L +A +INEALK++ M
Sbjct: 232 YTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMT 291
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK------------------------- 398
D+C P Y+ LI+ LS +GR +A +F +MK
Sbjct: 292 EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMD 351
Query: 399 ----------KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
++G++P+V+TYN +I C ++A ++L ME + C P+ TY L+
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+K+++ LL M + +S TY SL+ G + LE A M G+V
Sbjct: 412 CGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471
Query: 509 PYHSTYKMLEEKLEKK 524
P TY + + L K+
Sbjct: 472 PDQWTYSVFIDTLCKE 487
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 174/363 (47%), Gaps = 4/363 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q G Y ++ L ++ + +L +M E +N ++ T + ++ L GR
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTE-DNCCPTVRTYTVLIYALSGSGRK 315
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNI 271
+A+ F MK+ G E + +VL+D L K N ++ A K+ E K IP S +N
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIP-SVVTYNA 374
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G+CK +DDA + + M P+ +Y I C+++ K L +M E+
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
PS+ITY ++H K + A ++ M + +PD YS I L K GRV++A
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+F+ +K +GV N + Y +I C + + A LL++M D C P+ TY L++
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++K+MK + L+ M V TY L+ +++ G + A F M+S G P
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614
Query: 512 STY 514
TY
Sbjct: 615 CTY 617
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 177/342 (51%), Gaps = 4/342 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++++ R D+A E F M + G +++ + + L+ L + + A K+F +
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290
Query: 259 K--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+C P + + + +LI+ + + +A EM ++G P+V +YT I+ C+E
Sbjct: 291 TEDNCCP-TVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENK 349
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ L EM EKG PSV+TY ++ K I++A ++ + M+S+ C P+T Y+
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI L K +V A + M ++ + P+++TYN++I C ++ E+A +LL M E+
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY+ + C++ R++ L + V + Y +L+ G + GK+++A
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLL 537
S E M++ +P TY +L E L ++K++ A + K+L
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/384 (25%), Positives = 164/384 (42%), Gaps = 31/384 (8%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++ L K +K L+ +M E SL T ++++ + + A M
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLE-RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLM 465
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKV 282
+ G+ D SV +DTL K VE A +F K + + I+ LI G+CK K+
Sbjct: 466 NENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKI 525
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D A ++ M P+ +Y IE C+EK ++ + +M G KP+V+TYTI+
Sbjct: 526 DVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTIL 585
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ + K + ALKV+ M S PD Y++ + G +++ +++ M ++G+
Sbjct: 586 IGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI 645
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK---- 458
+P+++TY +I A L+ M + CKP + L+K + RMK
Sbjct: 646 LPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS 705
Query: 459 ------VLNF-------------------LLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
V N L M ++ ++D Y +L+ G + +LE
Sbjct: 706 EIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLE 765
Query: 494 LACSFFEEMISKGIVPYHSTYKML 517
A M +G+ P Y L
Sbjct: 766 EAQGLVHHMKERGMSPSEDIYNSL 789
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 160/350 (45%), Gaps = 8/350 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y ++D L K K +++ EM E G + S+ T + ++ + G DDA E
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSE--KGLIPSVVTYNALIDGYCKEGMIDDAFEILDL 394
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKT 279
M+ +TR + L+ L K V A + LE K + S +N LIHG CK
Sbjct: 395 MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK--LSPSLITYNSLIHGQCKV 452
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++ A + + M + G PD +Y+ FI+ C+E + ++ KG K + + Y
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIY 512
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ K +I+ A + E+M +D CLP++ Y+ LI L K ++K+A+ + M
Sbjct: 513 TALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLT 572
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
GV P V+TY +I ++ALK+ M +PD TY L + ++
Sbjct: 573 MGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEE 632
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
++ ++ M + + D TY L+ G G A F + M+ G P
Sbjct: 633 VDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP 682
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 164/386 (42%), Gaps = 35/386 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN+++ K + L+ M+E NG V T S + L + GR ++A F
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNE--NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTR 280
+K GV+ + + L+D K ++ AY + + C+P +S +N+LI G CK +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP-NSYTYNVLIEGLCKEK 558
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+ +A + +M G P VV+YT I ++ F M G +P V TYT
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+HA + E V KM + LPD Y+ LI ++ G A + + M
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678
Query: 401 GVVPNVLTYNTMISSAC-------ARSE----------------------EENALKLLQK 431
G P++ + +I + RSE E ALKL +K
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEK 738
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M E C D Y L+ C+++R++ L+ HM + +S Y SL+ + G
Sbjct: 739 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGV 798
Query: 492 LELACSFFEEMISKGIVPYHSTYKML 517
A + M+ G++P +YK+L
Sbjct: 799 YAEAVRLVDAMVENGLLPLLESYKLL 824
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 140/322 (43%), Gaps = 43/322 (13%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDE---LNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
+Y ++D K K + + L++ M L N Y T + ++ L + + +A
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSY----TYNVLIEGLCKEKKMKEASSL 566
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ----IFNILIHG 275
M GV+ ++L+ ++K + +HA KVF + L Q + +H
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVF---NHMVSLGYQPDVCTYTAFLHA 623
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+ +++ + +M ++G PD+V+YT I+ Y R + D LK M + GCKPS
Sbjct: 624 YFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPS 683
Query: 336 VITYTIVMHALGKAKQINE-----------------------------ALKVYEKMKSDD 366
+ +I++ L ++ E ALK++EKM
Sbjct: 684 LYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHG 743
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C D S Y +LI + R+++A + MK++G+ P+ YN+++ C A+
Sbjct: 744 CTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAV 803
Query: 427 KLLQKMEEDLCKPDCETYAPLL 448
+L+ M E+ P E+Y L+
Sbjct: 804 RLVDAMVENGLLPLLESYKLLV 825
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 108/240 (45%), Gaps = 6/240 (2%)
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKG---CKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
I+ C +D V + ++M G KP++ Y ++ +L K I+E VY ++
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
++ P+ +++++ K G V +A + + G+ P+ TY ++I C +
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
NA ++ M + C+ + +Y L+ C R+ L M +++ TY L+
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
L SG+ A + F EM KG P TY +L + L K+ N + K+L+ E+
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKE---NKMDEARKMLSEMSEK 363
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 97/238 (40%), Gaps = 5/238 (2%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L T + ++ R G A + + M G + +S+L+ L N ++
Sbjct: 649 LVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS--- 705
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ I S + ++ I KT + + A K ++M + G + DV Y I +C+++
Sbjct: 706 --EIGIDSVSNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQER 763
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + M+E+G PS Y ++ K EA+++ + M + LP Y
Sbjct: 764 LEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKL 823
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
L+ L G + A +F + G + + + +I R + +L+ MEE
Sbjct: 824 LVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEE 881
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 62/133 (46%)
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
I+ LI G+C+ ++++AQ + M ++G SP Y ++ C+ + + + M
Sbjct: 750 IYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM 809
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
E G P + +Y +++ L +A V+ + S D + LI L K V
Sbjct: 810 VENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLV 869
Query: 388 KDANEIFEDMKKQ 400
+ +E+ + M+++
Sbjct: 870 DECSELIDIMEEK 882
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 176/342 (51%), Gaps = 5/342 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N+++D L K ++ + K E ++ T ST++ L + + D+A++ M
Sbjct: 511 FNSVLDGLCKEQRILDAHNVFKRALE-RGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKM 569
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
+ G +T S ++D L+K +E A V + +D C+P + +N LI G+ K ++
Sbjct: 570 VELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLP-DAVTYNTLIDGFFKRQR 628
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A ++EM + GF P VV+YT CR F + + L M +GC P+ ITY+
Sbjct: 629 LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 688
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCL-PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L KA ++ EAL +EKM D+ + P YS+LI L KAGR+ +A E E M +
Sbjct: 689 IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRA 748
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G +P+V+T++ +I+ C + L+L M E CK D Y ++ C K
Sbjct: 749 GRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAA 808
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
LL M + ++ + T+ +++ L + +++ A S+F +
Sbjct: 809 YALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSI 850
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 193/404 (47%), Gaps = 27/404 (6%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++ L K ++ + V+ M ++ T ST+++ L GR + A E + M
Sbjct: 348 YNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERM 407
Query: 224 KKY-GVEKDTRALSVLMDTLVKGNSVE----------------------HAYKV-FLEFK 259
G+ + + L++ L K H+ +V FL +
Sbjct: 408 VAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQ 467
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
C P + +N L+ G K+ V DA ++ M + G SPDV+++ ++ C+E+
Sbjct: 468 VCRP-TLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILD 526
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ K E+GC+P+V+TY+ ++ L K +++EAL++ KM C +T YS+++
Sbjct: 527 AHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVD 586
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L K GR++DA + M+ G +P+ +TYNT+I R A+ LL++M E P
Sbjct: 587 GLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHP 646
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
TY L CR R +L +M + +A TY+S+V GL ++G++ A +F
Sbjct: 647 SVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYF 706
Query: 500 EEMISKGIV-PYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAK 541
E+M +V P+ Y L + L K R+ A E + +++ +
Sbjct: 707 EKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGR 750
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/360 (28%), Positives = 172/360 (47%), Gaps = 13/360 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++D K ++ L++EM L G+ S+ T +T+ L R GR+D+AVE
Sbjct: 616 YNTLIDGFFKRQRLREAVGLLREM--LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDY 673
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M G + S ++D L K V A F + + + ++ LI G CK
Sbjct: 674 MAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAG 733
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKPSVI 337
++D+A + ++ M + G PDVV+++ I C D ++D L+ M E+GCK +
Sbjct: 734 RIDEAYEFLERMIRAGRIPDVVTFSILINGLC---DAGRIDTGLELFCGMAERGCKADIY 790
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y +++A + + A + E+MK+ +T + +I L R+ +A F +
Sbjct: 791 AYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSI 850
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ + ++YNT+I+S A E AL+LL+ M D PD Y ++ +
Sbjct: 851 PED--CRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSP 908
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+V LL M S D TY ++ GL ++ +L LAC +FEEM+ K + P Y L
Sbjct: 909 EVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSL 968
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 129/255 (50%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N+LI+G CK +V DA A ++ Q GF P VV+Y+ I+ CR+ + K L+EM
Sbjct: 4 YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+GC P+ +TY +++AL + EA + E+M ++ C P+ + +I L K G ++
Sbjct: 64 GRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIE 123
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
A + ++M +G VP+V + ++ + C + A Q++ PD TY ++
Sbjct: 124 AAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMV 183
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ R++ +L + ++ S T+ V GL ++G L A FF+ M G+
Sbjct: 184 DGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVS 243
Query: 509 PYHSTYKMLEEKLEK 523
P TY L + L K
Sbjct: 244 PNTVTYDALIDGLCK 258
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 144/310 (46%), Gaps = 10/310 (3%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T + ++ L + GR DA AFR ++G S ++D L + N V+ K+
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E + C P ++ +N L++ + +A ++ M G P+++++ I+ C+E
Sbjct: 61 EMAGRGCAP-NAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKE 119
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + EM ++G P V +T+++HAL + +++EA ++++ PD Y
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++++ L KAGR++ A + + + + P V T+ + A + M +
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA--SLVRGLIESGKL 492
P+ TY L+ C+ ++ + LL D + AG +A SL+ GL ++ +L
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGLL-----RDKNSQAGMFAFSSLLHGLCQAHRL 294
Query: 493 ELACSFFEEM 502
E A + M
Sbjct: 295 EEAIQLLKAM 304
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 166/351 (47%), Gaps = 14/351 (3%)
Query: 161 PEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM-RRLVRGGRYDDAV 217
PE+ + ++ L K + + +V EM ++ G+V + T++ L GR D+A
Sbjct: 104 PELITFGLIIKGLCKEGEIEAAFRVVDEM--VDRGFVPDVEIHTVLLHALCELGRVDEAW 161
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGW 276
F+ + G D + ++D L K +E A V + + F I + G
Sbjct: 162 FFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGL 221
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
K + A + M Q G SP+ V+Y I+ C+ K+D L +++K + +
Sbjct: 222 SKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAG---KLDIALGLLRDKNSQAGM 278
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
++ ++H L +A ++ EA+++ + M C+P+ ++SL+ L +A RV +A E+F+
Sbjct: 279 FAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQARRVDEAFELFDV 335
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE-DLCKPDCETYAPLLKMCCRKK 455
MK+ G +V+TYN ++ C A + ++ M + C P+ T++ L++ C
Sbjct: 336 MKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAG 395
Query: 456 RMKVLNFLLTHMFK-NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
R+ + M +S + TYA L+ GL ++G FE+M+ +
Sbjct: 396 RVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLER 446
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 189/444 (42%), Gaps = 22/444 (4%)
Query: 71 GWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSP--DKVVEAL-----KGCGV 123
G+ + RL E + +L V + + +S D+ VE L +GC
Sbjct: 622 GFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAP 681
Query: 124 SV--SNSLVEQTLRRFSNDLTPAFGFFT-WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLM 180
+ +S+V+ + + +T A G+F A+ + H Y+ ++D L K+ +
Sbjct: 682 NAITYSSIVDGLCK--AGRVTEALGYFEKMARDEVVAPHVIA-YSALIDGLCKAGRIDEA 738
Query: 181 WELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+E ++ M + G + + T S ++ L GR D +E F GM + G + D A + ++
Sbjct: 739 YEFLERM--IRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMI 796
Query: 240 DTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
+ AY + E K I ++ I+I C ++D+A + +
Sbjct: 797 NAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPED--C 854
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
D +SY I + + + L+ M G P Y VM L KA A K+
Sbjct: 855 RDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKL 914
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
++M+S PD Y+ +I LSKA ++ A + FE+M ++ + P+ + Y+++I + C
Sbjct: 915 LQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCK 974
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ ++A KLL+ +P Y+ ++ C+ + ++ M +
Sbjct: 975 ADKVDDAWKLLRSSG---IEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHI 1031
Query: 479 YASLVRGLIESGKLELACSFFEEM 502
+ SL + G+++ A ++
Sbjct: 1032 WTSLATAYVAEGRVDEAVKLVNDL 1055
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 4/199 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+T++ LV R + A+E R M G D +MD L K S E A K+ E +
Sbjct: 861 NTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRS 920
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ + I+I G K +++ A +EM ++ PD + Y+ I+ +C+ K
Sbjct: 921 RGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKAD---K 977
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
VDD K ++ G +P++ Y+ ++ +L K + ++AL+V +MKS +C P ++SL
Sbjct: 978 VDDAWKLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLAT 1037
Query: 380 ILSKAGRVKDANEIFEDMK 398
GRV +A ++ D++
Sbjct: 1038 AYVAEGRVDEAVKLVNDLQ 1056
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 102/210 (48%)
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
++TY ++++ L KA ++ +A + K P YS++I L + V ++ E
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M +G PN +TYNT++++ + + A LL++M + C P+ T+ ++K C++
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
++ ++ M D + L+ L E G+++ A FF++++ G P TY
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 516 MLEEKLEKKRLGNAKERINKLLAHAKEQKT 545
+ + L K A + +LLA + T
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPT 210
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 164 bits (416), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 191/375 (50%), Gaps = 3/375 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +V L ++++M G ++ T +T++ R G D A M
Sbjct: 193 YNILVRALCGRGHRKEALSILRDMRGAGCG-PNVVTYNTLVAAFFRAGEVDGAERLVGMM 251
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
++ G++ + + +++ + K +E A KVF E ++ + +N L+ G+CK
Sbjct: 252 REGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCS 311
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A EM Q+G PDVV++T I C+ + + +++M+E+G + + +T+T +
Sbjct: 312 HEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTAL 371
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ K +++AL MK P Y++LI GR+ +A E+ +M+ +G+
Sbjct: 372 IDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 431
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+V+TY+T+IS+ C + +A +L Q+M E PD TY+ L+++ C +KR+ +
Sbjct: 432 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHV 491
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L +M K + D TY SL+ G + G +E A S ++M+ G++P TY +L L
Sbjct: 492 LFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLS 551
Query: 523 KK-RLGNAKERINKL 536
K R A++ + KL
Sbjct: 552 KSARAMEAQQLLFKL 566
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 185/393 (47%), Gaps = 22/393 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT+V G K C L + G + + T ++++ + + G + AV R
Sbjct: 298 YNTLVG--GYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQ 355
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
M++ G++ + + L+D K ++ A K C I S +N LI+G+C +
Sbjct: 356 MRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGR 415
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A++ + EM +G PDVV+Y+ I YC+ D + ++M EKG P ITY+
Sbjct: 416 MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSS 475
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K++++A +++ M PD Y+SLI K G V+ A + + M K G
Sbjct: 476 LIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAG 535
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V+P+V+TY+ +I+ + A +LL K+ + P Y L+ CCRK +K +
Sbjct: 536 VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMH-CCRKAELKSVL 594
Query: 462 FLL----------------THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
LL M + ++D Y+ L+ G +G + A SF ++M+
Sbjct: 595 ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQG 654
Query: 506 GIVPYH-STYKMLEEKLEKKRLGNAKERINKLL 537
G P ST ++ E + A + I +LL
Sbjct: 655 GFAPNSTSTISLIRGLFENGMVVEADQVIQQLL 687
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 111/209 (53%)
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A++ M G +P+V +Y + C ++ L++M+ GC P+V+TY ++
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 233
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
A +A +++ A ++ M+ P+ ++S++ + KAG+++DA ++F++M ++G+ P
Sbjct: 234 AFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAP 293
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+ ++YNT++ C AL + +M + PD T+ L+ + C+ ++ L+
Sbjct: 294 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLV 353
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLE 493
M + + M+ T+ +L+ G + G L+
Sbjct: 354 RQMRERGLQMNEVTFTALIDGFCKKGFLD 382
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G PSV+ Y V+ AL A + A + ++ M SD P+ Y+ L+ L G K+A
Sbjct: 151 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
I DM+ G PNV+TYNT++++ E + A +L+ M E KP+ T+ ++
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ +M+ + M + ++ D +Y +LV G ++G A S F EM KGI+P
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329
Query: 511 HSTYKML 517
T+ L
Sbjct: 330 VVTFTSL 336
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 128/294 (43%), Gaps = 21/294 (7%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRG 222
Y+T++ K+ +EL ++M L G + A T S+++R L R DA F+
Sbjct: 438 YSTIISAYCKNCDTHSAFELNQQM--LEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKN 495
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRK 281
M K G++ D + L+D K +VE A + + L + +++LI+G K+ +
Sbjct: 496 MIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSAR 555
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV----------------DDTLK 325
+AQ+ + +++ + P Y + H CR+ + + V D +
Sbjct: 556 AMEAQQLLFKLYHEDPIPANTKYDALM-HCCRKAELKSVLALLKGFCMKGLMNEADKVYQ 614
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
M ++ Y++++H +A + +AL +++M P+++ SLI L + G
Sbjct: 615 SMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENG 674
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
V +A+++ + + + + +I + L +L M +D P
Sbjct: 675 MVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLP 728
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 112/259 (43%), Gaps = 19/259 (7%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y++++ VL K+ L K M +L T ++++ + G + A+ M
Sbjct: 473 YSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEF-TYTSLIDGHCKEGNVESALSLHDKM 531
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIH------- 274
K GV D SVL++ L K A ++ + +D IP +++ ++ L+H
Sbjct: 532 VKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTK-YDALMHCCRKAEL 590
Query: 275 --------GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
G+C +++A K + M + ++ D Y+ I +CR + K K+
Sbjct: 591 KSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQ 650
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M + G P+ + ++ L + + EA +V +++ + L D +LI + G
Sbjct: 651 MLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALIDLNLNEGN 710
Query: 387 VKDANEIFEDMKKQGVVPN 405
V ++ M K G++P+
Sbjct: 711 VDAVLDVLHGMAKDGLLPS 729
>gi|224133318|ref|XP_002321537.1| predicted protein [Populus trichocarpa]
gi|222868533|gb|EEF05664.1| predicted protein [Populus trichocarpa]
Length = 834
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/413 (28%), Positives = 200/413 (48%), Gaps = 22/413 (5%)
Query: 47 SLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSK 106
++P +K ++ P D +P++ +R + + +S H V+ +S+IL +
Sbjct: 239 TIPQRLKAQPNRRPSRDTKMPAVV-----------ARSARQFVSTGHV--VENVSQILRQ 285
Query: 107 QYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNT 166
P EAL + Q L++ D T A GFF W K G+ H Y T
Sbjct: 286 LRWGP-SAEEALVNLNCHMDAYQANQVLKQL-QDHTVALGFFHWLKQLPGFKHDGYTYTT 343
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK 225
MV +LG++K+F + +L+ +M + +G ++ T + ++ R +DAVE F M+K
Sbjct: 344 MVGILGRAKQFVAINKLLDQM--VRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQK 401
Query: 226 YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NILIHGWCKTRKVD 283
G E D L+D K + A +++ + LS F +++I+ K +
Sbjct: 402 AGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQ-AAGLSPDTFTYSVMINCLGKAGHLA 460
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A K EM +QG P++V+Y I + ++++ ++MQ G +P +TY+IVM
Sbjct: 461 AADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVM 520
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
LG + ++EA ++ +MK + +PD Y L+ + KAG V+ A E ++ M G+
Sbjct: 521 EVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLC 580
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
PNV T N+++S+ + +A LLQ M P +TY LL CC + R
Sbjct: 581 PNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYTLLLS-CCTEAR 632
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 129/253 (50%), Gaps = 1/253 (0%)
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
K + +M + G P VV+Y I Y R + +MQ+ GC+P +TY ++
Sbjct: 358 NKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLIDI 417
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
KA +N A+++Y++M++ PDT YS +I L KAG + A+++F +M +QG VPN
Sbjct: 418 HAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCVPN 477
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
++TYN MI+ +NALKL + M+ +PD TY+ ++++ + + +
Sbjct: 478 LVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFS 537
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST-YKMLEEKLEKK 524
M + + D Y LV ++G +E A +++ M+ G+ P T +L L
Sbjct: 538 EMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVN 597
Query: 525 RLGNAKERINKLL 537
RL +A + +L
Sbjct: 598 RLPDAYNLLQSML 610
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 69/222 (31%), Positives = 113/222 (50%)
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
GF D +YT + R K F ++ L +M GC+P+V+TY ++H+ G+A +N+A
Sbjct: 333 GFKHDGYTYTTMVGILGRAKQFVAINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDA 392
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
++V+ +M+ C PD Y +LI I +KAG + A E+++ M+ G+ P+ TY+ MI+
Sbjct: 393 VEVFNQMQKAGCEPDRVTYCTLIDIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINC 452
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
A KL +M E C P+ TY ++ + + + + L M D
Sbjct: 453 LGKAGHLAAADKLFCEMIEQGCVPNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPD 512
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
TY+ ++ L SG L+ A + F EM K VP Y +L
Sbjct: 513 KVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVPDEPVYGLL 554
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 101/228 (44%), Gaps = 7/228 (3%)
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEM-------QEKGCKPSVITYTIVMHALGKAKQIN 353
+V+ C ++ Y + +++ D + Q G K TYT ++ LG+AKQ
Sbjct: 296 LVNLNCHMDAYQANQVLKQLQDHTVALGFFHWLKQLPGFKHDGYTYTTMVGILGRAKQFV 355
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
K+ ++M D C P Y+ LI +A + DA E+F M+K G P+ +TY T+I
Sbjct: 356 AINKLLDQMVRDGCQPTVVTYNRLIHSYGRANYLNDAVEVFNQMQKAGCEPDRVTYCTLI 415
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
A+++ Q+M+ PD TY+ ++ + + + L M +
Sbjct: 416 DIHAKAGFLNFAMEMYQRMQAAGLSPDTFTYSVMINCLGKAGHLAAADKLFCEMIEQGCV 475
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ TY ++ ++ + A + +M + G P TY ++ E L
Sbjct: 476 PNLVTYNIMIALQAKARNYQNALKLYRDMQNAGFEPDKVTYSIVMEVL 523
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 115/282 (40%), Gaps = 41/282 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ M++ LGK+ +L EM E G V +L T + ++ + Y +A++ +R
Sbjct: 446 YSVMINCLGKAGHLAAADKLFCEMIE--QGCVPNLVTYNIMIALQAKARNYQNALKLYRD 503
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTR 280
M+ G E D S++M+ L ++ A +F E K + +P ++ +L+ W K
Sbjct: 504 MQNAGFEPDKVTYSIVMEVLGHSGYLDEAEAIFSEMKRKNWVP-DEPVYGLLVDLWGKAG 562
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V+ A + + M G P+V + + + R + L+ M G PS+ TYT
Sbjct: 563 NVEKAWEWYQAMLHAGLCPNVPTCNSLLSAFLRVNRLPDAYNLLQSMLNLGLNPSLQTYT 622
Query: 341 IVMHALGKAKQI-----------------------------------NEALKVYEKMKSD 365
+++ +A+ + K + M S+
Sbjct: 623 LLLSCCTEARSPYDMGCYCELMSVTGHPAHMFLSSLPSAGPDGQNVRHHVSKFLDMMHSE 682
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
D +++ L K+G ++A ++E ++ V P+ +
Sbjct: 683 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEIAAQRNVYPDAV 724
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 187/375 (49%), Gaps = 6/375 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N MV+VL K K E + M+ L G+ ++ + +TI+ G + A
Sbjct: 252 FNIMVNVLCKEGKLKKAREFIGFMEGL--GFKPNVVSYNTIIHGYSSRGNIEGARRILDA 309
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTR 280
M+ G+E D+ L+ + K +E A +F + + +P ++ +N LI G+C
Sbjct: 310 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP-NAVTYNTLIDGYCNKG 368
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ A EM ++G P V +Y + E + DD +KEM++KG P ITY
Sbjct: 369 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 428
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + +A ++ +M S P Y+SLI++LS+ R+K+A+++FE + Q
Sbjct: 429 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 488
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
GV P+V+ +N M+ CA E A LL++M+ PD T+ L++ CR+ +++
Sbjct: 489 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 548
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
LL M + + D +Y +L+ G G ++ A +EM+S G P TY L +
Sbjct: 549 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 608
Query: 521 LEKKRLGNAKERINK 535
L K + G+ E + K
Sbjct: 609 LCKNQEGDLAEELLK 623
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 150/309 (48%), Gaps = 8/309 (2%)
Query: 236 SVLMDTLVKG----NSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
S++ D LV+ + A+K F ++ K +P + N ++ + K +++ A
Sbjct: 179 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVP-KIETCNDMLSLFLKLNRMEMAWVLY 237
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
EMF+ S V ++ + C+E +K + + M+ G KP+V++Y ++H
Sbjct: 238 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 297
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
I A ++ + M+ PD+ Y SLI + K GR+++A+ +F+ M + G+VPN +TY
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
NT+I C + + E A +M + P TY L+ + RM + ++ M K
Sbjct: 358 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 417
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGN 528
+ DA TY L+ G G + A EM+SKGI P H TY L L ++ R+
Sbjct: 418 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 477
Query: 529 AKERINKLL 537
A + K+L
Sbjct: 478 ADDLFEKIL 486
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 161/357 (45%), Gaps = 42/357 (11%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFN 270
R D+A + F MK+ G+ + ++ +K N +E A+ ++ E F+ I + FN
Sbjct: 194 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 253
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
I+++ CK K+ A++ + M GF P+VVSY I Y + L M+ K
Sbjct: 254 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 313
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKM---------------------KSD---- 365
G +P TY ++ + K ++ EA +++KM K D
Sbjct: 314 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 373
Query: 366 ----------DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+P S Y+ L+ L GR+ +A+++ ++M+K+G++P+ +TYN +I+
Sbjct: 374 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 433
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
+ A L +M +P TY L+ + R+ RMK + L + VS D
Sbjct: 434 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 493
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML------EEKLEKKRL 526
+ ++V G +G +E A +EM K + P T+ L E K+E+ R+
Sbjct: 494 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 550
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 151/324 (46%), Gaps = 36/324 (11%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +++ + + GR ++A F M + G+ + + L+D +E A+ E
Sbjct: 321 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 380
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K I S +N+L+H ++ +A +KEM ++G PD ++Y I Y R +
Sbjct: 381 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 440
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+K D EM KG +P+ +TYT +++ L + ++ EA ++EK+ PD ++++
Sbjct: 441 KKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 500
Query: 378 I------------FILSKA-----------------------GRVKDANEIFEDMKKQGV 402
+ F+L K G+V++A + ++MK++G+
Sbjct: 501 VDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGI 560
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+ ++YNT+IS R + ++A ++ +M P TY L+K C+ + +
Sbjct: 561 KPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE 620
Query: 463 LLTHMFKNDVSMDAGTYASLVRGL 486
LL M +S D TY SL+ G+
Sbjct: 621 LLKEMVNKGISPDDSTYLSLIEGM 644
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 97/200 (48%)
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
R++ D L +++ S I + +++ + ++ +EA K + MK +P + +
Sbjct: 161 RELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDM 220
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ + K R++ A ++ +M + + V T+N M++ C + + A + + ME
Sbjct: 221 LSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGF 280
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KP+ +Y ++ + ++ +L M + D+ TY SL+ G+ + G+LE A
Sbjct: 281 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 340
Query: 498 FFEEMISKGIVPYHSTYKML 517
F++M+ G+VP TY L
Sbjct: 341 LFDKMVEIGLVPNAVTYNTL 360
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 36/193 (18%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T ++++ L R R +A + F + GV D + ++D +VE A+ + E
Sbjct: 460 VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKE 519
Query: 258 F-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ +P FN L+ G C+ KV++A+ + EM ++G PD +SY I Y R D
Sbjct: 520 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGD 579
Query: 317 ----FRKVDDTL-------------------------------KEMQEKGCKPSVITYTI 341
FR D+ L KEM KG P TY
Sbjct: 580 IKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 639
Query: 342 VMHALGKAKQINE 354
++ +G + E
Sbjct: 640 LIEGMGNVDTLVE 652
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/350 (28%), Positives = 180/350 (51%), Gaps = 6/350 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN +++ L K + ++L++EM + GY T +TI+ L R G+ +A + F
Sbjct: 83 YNALINGLCKDENIERAYKLLEEM--ASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDS 140
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQI-FNILIHGWCKT 279
M G D A + L+D L K V A+ +F ++ D I +N LI G+C+
Sbjct: 141 MPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRV 200
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
K D+A K K++ +G+ PD V+Y + R+ + + ++ K+M + GC P+ TY
Sbjct: 201 EKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATY 260
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+IV+ + + L++YE+M PD +++I +L KA +V DA+++ E+M K
Sbjct: 261 SIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSK 320
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G VP+V+TYN ++ C + + A +L M ++ C PD +Y+ +L C+ ++
Sbjct: 321 IGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHD 380
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
L M + + D T+ L+ GL ++GKL+ A + M ++P
Sbjct: 381 ARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLP 430
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 111/430 (25%), Positives = 199/430 (46%), Gaps = 43/430 (10%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYD 214
GY YN ++D L K K W L K MD + L T +T++ R + D
Sbjct: 145 GYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTD 204
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIP--------L 264
+A++ F+ + G DT + ++ L + ++++ A ++F + D C P L
Sbjct: 205 EAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVL 264
Query: 265 SSQ--------------------------IFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
S + N +I CK +KVDDA K ++EM + G
Sbjct: 265 SGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAV 324
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PDVV+Y ++ C+ K + M + GC P +++Y++V++ L K ++++A +
Sbjct: 325 PDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVL 384
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+++M +PD ++ L+ L KAG++ +A ++ + M + V+P+ +T T++ C
Sbjct: 385 FDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCR 444
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND--VSMDA 476
+ A++L Q M E D + +L CR+ ++ M K+D S D
Sbjct: 445 DKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDV 504
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
TY +LV LIE+G+++ A +F++M G P + Y L L K+ +R
Sbjct: 505 VTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADR---- 560
Query: 537 LAHAKEQKTF 546
L A ++K F
Sbjct: 561 LTQAMKEKGF 570
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/416 (26%), Positives = 199/416 (47%), Gaps = 42/416 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+T++ L K+ K E+V+EM E +AT + I+ RL R G+ D+A E F M
Sbjct: 13 YSTIISGLCKTGKVTEALEMVEEMTE-KGVNPDVATYTIIVDRLCRAGKVDEADELFHKM 71
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ G +T A + L++ L K ++E AYK+ E K P + +N ++ G C+ K
Sbjct: 72 IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEP-DNITYNTILSGLCRMGK 130
Query: 282 VDDAQKAMKEMFQQGFSPDVV-------------------------------------SY 304
V +A++ M +G+SPDVV +Y
Sbjct: 131 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITY 190
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
I+ +CR + + K++ KG P +TY ++ L + ++EA ++++KM
Sbjct: 191 NTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVD 250
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
C P+ + YS ++ + G + E++E+M ++ P+VL N +I C + ++
Sbjct: 251 SGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDD 310
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A K+L++M + PD TY LL C+ + + L + M N + D +Y+ ++
Sbjct: 311 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 370
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAH 539
GL ++ K+ A F+ MI + +VP T+ +L + L K +L AK+ ++ + H
Sbjct: 371 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEH 426
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 127/249 (51%), Gaps = 3/249 (1%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M ++GF PDVV+Y+ I C+ + + ++EM EKG P V TYTI++ L +A +
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++EA +++ KM C +T Y++LI L K ++ A ++ E+M +G P+ +TYNT
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
++S C + A + M PD Y LL ++ ++ L M D
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMAD 180
Query: 472 --VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGN 528
V+ D TY +L+ G K + A F+++I+KG +P TY + L +K +
Sbjct: 181 RKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDE 240
Query: 529 AKERINKLL 537
A+E K++
Sbjct: 241 AEEMFKKMV 249
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 142/287 (49%), Gaps = 7/287 (2%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
N ++D+L K+KK ++++EM ++ + T + ++ L + D A E F M
Sbjct: 296 NAVIDMLCKAKKVDDAHKVLEEMSKIG-AVPDVVTYNILLDGLCKTNLVDKAHELFSTMV 354
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKV 282
G D + SV+++ L K N V A +F + +P FNIL+ G CK K+
Sbjct: 355 DNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVP-DVVTFNILMDGLCKAGKL 413
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D+A+ + M + PD V+ T + CR+K + + M EKG V+ + IV
Sbjct: 414 DEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIV 473
Query: 343 MHALGKAKQINEALKVYEKM-KSD-DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+ L + ++ +AL ++ M KSD + PD Y++L+ L +AGRV A + F+ M
Sbjct: 474 LAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGS 533
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
G P+ + YNT+++ + A +L Q M+E DC APL
Sbjct: 534 GCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSDC-FKAPL 579
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 187/375 (49%), Gaps = 6/375 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N MV+VL K K E + M+ L G+ ++ + +TI+ G + A
Sbjct: 230 FNIMVNVLCKEGKLKKAREFIGFMEGL--GFKPNVVSYNTIIHGYSSRGNIEGARRILDA 287
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTR 280
M+ G+E D+ L+ + K +E A +F + + +P ++ +N LI G+C
Sbjct: 288 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVP-NAVTYNTLIDGYCNKG 346
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ A EM ++G P V +Y + E + DD +KEM++KG P ITY
Sbjct: 347 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 406
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + +A ++ +M S P Y+SLI++LS+ R+K+A+++FE + Q
Sbjct: 407 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 466
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
GV P+V+ +N M+ CA E A LL++M+ PD T+ L++ CR+ +++
Sbjct: 467 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 526
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
LL M + + D +Y +L+ G G ++ A +EM+S G P TY L +
Sbjct: 527 RMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKC 586
Query: 521 LEKKRLGNAKERINK 535
L K + G+ E + K
Sbjct: 587 LCKNQEGDLAEELLK 601
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 150/309 (48%), Gaps = 8/309 (2%)
Query: 236 SVLMDTLVKG----NSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
S++ D LV+ + A+K F ++ K +P + N ++ + K +++ A
Sbjct: 157 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVP-KIETCNDMLSLFLKLNRMEMAWVLY 215
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
EMF+ S V ++ + C+E +K + + M+ G KP+V++Y ++H
Sbjct: 216 AEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
I A ++ + M+ PD+ Y SLI + K GR+++A+ +F+ M + G+VPN +TY
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
NT+I C + + E A +M + P TY L+ + RM + ++ M K
Sbjct: 336 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 395
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGN 528
+ DA TY L+ G G + A EM+SKGI P H TY L L ++ R+
Sbjct: 396 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 455
Query: 529 AKERINKLL 537
A + K+L
Sbjct: 456 ADDLFEKIL 464
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 161/357 (45%), Gaps = 42/357 (11%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFN 270
R D+A + F MK+ G+ + ++ +K N +E A+ ++ E F+ I + FN
Sbjct: 172 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFN 231
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
I+++ CK K+ A++ + M GF P+VVSY I Y + L M+ K
Sbjct: 232 IMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVK 291
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKM---------------------KSD---- 365
G +P TY ++ + K ++ EA +++KM K D
Sbjct: 292 GIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERA 351
Query: 366 ----------DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+P S Y+ L+ L GR+ +A+++ ++M+K+G++P+ +TYN +I+
Sbjct: 352 FSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILING 411
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
+ A L +M +P TY L+ + R+ RMK + L + VS D
Sbjct: 412 YSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPD 471
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML------EEKLEKKRL 526
+ ++V G +G +E A +EM K + P T+ L E K+E+ R+
Sbjct: 472 VIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 528
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 151/324 (46%), Gaps = 36/324 (11%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +++ + + GR ++A F M + G+ + + L+D +E A+ E
Sbjct: 299 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 358
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K I S +N+L+H ++ +A +KEM ++G PD ++Y I Y R +
Sbjct: 359 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 418
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+K D EM KG +P+ +TYT +++ L + ++ EA ++EK+ PD ++++
Sbjct: 419 KKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 478
Query: 378 I------------FILSKA-----------------------GRVKDANEIFEDMKKQGV 402
+ F+L K G+V++A + ++MK++G+
Sbjct: 479 VDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGI 538
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+ ++YNT+IS R + ++A ++ +M P TY L+K C+ + +
Sbjct: 539 KPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE 598
Query: 463 LLTHMFKNDVSMDAGTYASLVRGL 486
LL M +S D TY SL+ G+
Sbjct: 599 LLKEMVNKGISPDDSTYLSLIEGM 622
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 97/200 (48%)
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
R++ D L +++ S I + +++ + ++ +EA K + MK +P + +
Sbjct: 139 RELFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDM 198
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ + K R++ A ++ +M + + V T+N M++ C + + A + + ME
Sbjct: 199 LSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGF 258
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KP+ +Y ++ + ++ +L M + D+ TY SL+ G+ + G+LE A
Sbjct: 259 KPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASG 318
Query: 498 FFEEMISKGIVPYHSTYKML 517
F++M+ G+VP TY L
Sbjct: 319 LFDKMVEIGLVPNAVTYNTL 338
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 77/193 (39%), Gaps = 36/193 (18%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T ++++ L R R +A + F + GV D + ++D +VE A+ + E
Sbjct: 438 VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKE 497
Query: 258 F-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ +P FN L+ G C+ KV++A+ + EM ++G PD +SY I Y R D
Sbjct: 498 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGD 557
Query: 317 ----FRKVDDTL-------------------------------KEMQEKGCKPSVITYTI 341
FR D+ L KEM KG P TY
Sbjct: 558 IKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLS 617
Query: 342 VMHALGKAKQINE 354
++ +G + E
Sbjct: 618 LIEGMGNVDTLVE 630
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 200/436 (45%), Gaps = 65/436 (14%)
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
+L F+ D A FF W + G+ H Y++M+++L +++ + ++ M +
Sbjct: 73 SLFAFNLDPQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIK--- 129
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG---VEKDTRALSVLMDTLVKGNSVE 249
S ++ ++ L E FR M G + R + ++ +L K ++
Sbjct: 130 ---SCCSIEDVLFVL----------EVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLID 176
Query: 250 HAYKVFLEFKDCIPLSSQI------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
V+LE L++QI FN +++G+CK V +A+ ++ Q G PD +
Sbjct: 177 EMKTVYLEL-----LNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFT 231
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
YT I +CR K + M +KGC+ + ++YT ++H L +A +INEALK++ M
Sbjct: 232 YTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMT 291
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK------------------------- 398
D+C P Y+ LI+ LS +GR +A +F +MK
Sbjct: 292 EDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMD 351
Query: 399 ----------KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
++G++P+V+TYN +I C ++A ++L ME + C P+ TY L+
Sbjct: 352 EARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELI 411
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+K+++ LL M + +S TY SL+ G + LE A M G+V
Sbjct: 412 CGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV 471
Query: 509 PYHSTYKMLEEKLEKK 524
P TY + + L K+
Sbjct: 472 PDQWTYSVFIDTLCKE 487
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 174/363 (47%), Gaps = 4/363 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q G Y ++ L ++ + +L +M E +N ++ T + ++ L GR
Sbjct: 257 QKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTE-DNCCPTVRTYTVLIYALSGSGRK 315
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNI 271
+A+ F MK+ G E + +VL+D L K N ++ A K+ E K IP S +N
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIP-SVVTYNA 374
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G+CK +DDA + + M P+ +Y I C+++ K L +M E+
Sbjct: 375 LIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK 434
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
PS+ITY ++H K + A ++ M + +PD YS I L K GRV++A
Sbjct: 435 LSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAG 494
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+F+ +K +GV N + Y +I C + + A LL++M D C P+ TY L++
Sbjct: 495 TLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGL 554
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++K+MK + L+ M V TY L+ +++ G + A F M+S G P
Sbjct: 555 CKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDV 614
Query: 512 STY 514
TY
Sbjct: 615 CTY 617
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 177/342 (51%), Gaps = 4/342 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++++ R D+A E F M + G +++ + + L+ L + + A K+F +
Sbjct: 231 TYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADM 290
Query: 259 K--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+C P + + + +LI+ + + +A EM ++G P+V +YT I+ C+E
Sbjct: 291 TEDNCCP-TVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENK 349
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ L EM EKG PSV+TY ++ K I++A ++ + M+S+ C P+T Y+
Sbjct: 350 MDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNE 409
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI L K +V A + M ++ + P+++TYN++I C ++ E+A +LL M E+
Sbjct: 410 LICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENG 469
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY+ + C++ R++ L + V + Y +L+ G + GK+++A
Sbjct: 470 LVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAY 529
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLL 537
S E M++ +P TY +L E L ++K++ A + K+L
Sbjct: 530 SLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKML 571
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 164/373 (43%), Gaps = 20/373 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++ L K +K L+ +M E SL T ++++ + + A M
Sbjct: 407 YNELICGLCKKRKVHKAMALLNKMLE-RKLSPSLITYNSLIHGQCKVNDLESAYRLLSLM 465
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKV 282
+ G+ D SV +DTL K VE A +F K + + I+ LI G+CK K+
Sbjct: 466 NENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKI 525
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D A ++ M P+ +Y IE C+EK ++ + +M G KP+V+TYTI+
Sbjct: 526 DVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTIL 585
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ + K + ALKV+ M S PD Y++ + G +++ +++ M ++G+
Sbjct: 586 IGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGI 645
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK---- 458
+P+++TY +I A L+ M + CKP + L+K + RMK
Sbjct: 646 LPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRS 705
Query: 459 ---------VLNF-----LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L + L M ++ ++D Y +L+ G + +LE A M
Sbjct: 706 EIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKE 765
Query: 505 KGIVPYHSTYKML 517
+G+ P Y L
Sbjct: 766 RGMSPSEDIYNSL 778
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 160/350 (45%), Gaps = 8/350 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y ++D L K K +++ EM E G + S+ T + ++ + G DDA E
Sbjct: 337 YTVLIDGLCKENKMDEARKMLSEMSE--KGLIPSVVTYNALIDGYCKEGMIDDAFEILDL 394
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKT 279
M+ +TR + L+ L K V A + LE K + S +N LIHG CK
Sbjct: 395 MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERK--LSPSLITYNSLIHGQCKV 452
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++ A + + M + G PD +Y+ FI+ C+E + ++ KG K + + Y
Sbjct: 453 NDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIY 512
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ K +I+ A + E+M +D CLP++ Y+ LI L K ++K+A+ + M
Sbjct: 513 TALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLT 572
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
GV P V+TY +I ++ALK+ M +PD TY L + ++
Sbjct: 573 MGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEE 632
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
++ ++ M + + D TY L+ G G A F + M+ G P
Sbjct: 633 VDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKP 682
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/451 (24%), Positives = 172/451 (38%), Gaps = 94/451 (20%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN+++ K + L+ M+E NG V T S + L + GR ++A F
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNE--NGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDS 499
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTR 280
+K GV+ + + L+D K ++ AY + + C+P +S +N+LI G CK +
Sbjct: 500 VKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLP-NSYTYNVLIEGLCKEK 558
Query: 281 KV-----------------------------------DDAQKAMKEMFQQGFSPDVVSYT 305
K+ D A K M G+ PDV +YT
Sbjct: 559 KMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYT 618
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
F+ Y + +VDD + +M E+G P ++TYT+++ + + A + M
Sbjct: 619 AFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDT 678
Query: 366 DCLPDTSFYSSLIFILSKAGRVKD------------------ANEIFEDMKKQGVVPNVL 407
C P S LI LS R+K+ A ++FE M + G +V
Sbjct: 679 GCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVS 738
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
Y +I+ C + E A L+ M+E P + Y LL CC+ L+ M
Sbjct: 739 IYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAM 798
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS----------------------- 504
+N + +Y LV GL G E A + F ++S
Sbjct: 799 VENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLV 858
Query: 505 ------------KGIVPYHSTYKMLEEKLEK 523
KG P TY +L E LE+
Sbjct: 859 DECSELIDIMEEKGCQPNPLTYSLLIEGLER 889
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 108/240 (45%), Gaps = 6/240 (2%)
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKG---CKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
I+ C +D V + ++M G KP++ Y ++ +L K I+E VY ++
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
++ P+ +++++ K G V +A + + G+ P+ TY ++I C +
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
NA ++ M + C+ + +Y L+ C R+ L M +++ TY L+
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
L SG+ A + F EM KG P TY +L + L K+ N + K+L+ E+
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKE---NKMDEARKMLSEMSEK 363
>gi|255582957|ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528067|gb|EEF30143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 202/413 (48%), Gaps = 7/413 (1%)
Query: 99 KISKILSKQYQSPDKVVE-ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGY 157
K+ +L SP + +E AL C +V+ L+ + L+R +D PA FF W
Sbjct: 51 KVQNVLKNYRDSPTRKIELALTQCNPTVTEDLILKVLKRHRSDWKPALIFFNWVSKGGKV 110
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
+ YN ++D+LGK ++F + +++ M + G V+ T ++ R + ++A+
Sbjct: 111 LMGSGAYNEILDILGKMRRFDELSQVLDIMSK-REGLVNEETYRVLVNRYAAAHKVEEAI 169
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
E F + G+E D + L+ L + V+ A + + + NI+++GWC
Sbjct: 170 EIFNTRRDIGLEIDLVSFQNLLMFLCRYKHVQIAESLLYSKGKDFGMDIKTMNIVLNGWC 229
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
V +A++ K++ PD+ +Y FI+ ++ + M EK CKP V+
Sbjct: 230 VLGNVHEAKRFWKDIIGSKCKPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQCKPDVV 289
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
++ AL ++ EAL+V+ +M CLP+ + Y+SLI S+ R++ E+ ++M
Sbjct: 290 ICNCIIDALCFKNRVPEALEVFREMSQQGCLPNGATYNSLIKHFSRIRRMEKVYELLDEM 349
Query: 398 --KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
KK +P+ +T+N ++ + + EE L +L++ME + C +TY +L++
Sbjct: 350 LDKKGSCMPDHITFNYLLKA--LKKPEELPL-VLERMERNGCMISTDTYNLILRLYADWD 406
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ + M K + D +Y ++ L E G++ A +F EM SKG+V
Sbjct: 407 CEERVGDTWNEMEKLGLGPDRRSYTIMIHWLYEKGRINDALHYFGEMTSKGMV 459
>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
Length = 669
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 182/377 (48%), Gaps = 11/377 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+V + L+ M + Y T + ++R L GR DA+ M
Sbjct: 114 YNTLVAGYCRYGHLDAARRLIGSMPVAPDAY----TYTPLIRVLCDRGRVADALSLLDDM 169
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ G + + +VL++ + + + E A V E K C P + +N++I+G C+ +
Sbjct: 170 LRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTP-NIVTYNVIINGMCREGR 228
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VDDA++ + + GF PD VSYT ++ C K + V++ EM EK C P+ +T+ +
Sbjct: 229 VDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 288
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + + A++V E+M C +T+ + +I + K GRV DA ++ DM G
Sbjct: 289 LIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYG 348
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+ ++Y T++ C ++A +LL +M + C P+ T+ + + C+K ++
Sbjct: 349 CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAI 408
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ M ++ ++ TY +LV G G ++ A F M K P TY L L
Sbjct: 409 MLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGL 465
Query: 522 -EKKRLGNAKERINKLL 537
+RL A E + ++L
Sbjct: 466 CNAERLDGAAELVAEML 482
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 193/408 (47%), Gaps = 42/408 (10%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ Y T++ L SK++ + EL EM E N + T ++R RGG +
Sbjct: 243 GFQPDTVSYTTLLKGLCASKRWDDVEELFAEMME-KNCMPNEVTFDMLIRFFCRGGMVER 301
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILI 273
A++ M ++G +T +++++++ K V+ A+K+ + C P + + ++
Sbjct: 302 AIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNP-DTISYTTVL 360
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G C+ + DDA++ + EM + P+ V++ FI C++ + +++M E GC
Sbjct: 361 KGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCT 420
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
V+TY +++ I+ AL+++ M C P+T Y++L+ L A R+ A E+
Sbjct: 421 VGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPNTITYTTLLTGLCNAERLDGAAEL 477
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL----K 449
+M + PNV+T+N ++S C + E A++L+++M E C P+ TY LL K
Sbjct: 478 VAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITK 537
Query: 450 MCCRKKRMKVLNFLLTHMFKNDV-------------------------SMDAG------T 478
C + +++L+ L++ DV D G
Sbjct: 538 DCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVV 597
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
Y ++ GL + +++ A FF M+S G +P STY +L E L + L
Sbjct: 598 YNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGL 645
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/358 (20%), Positives = 163/358 (45%), Gaps = 7/358 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
T+ G + N +++ + K + ++L+ +M ++ + +T+++ L R R
Sbjct: 310 TEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTI-SYTTVLKGLCRAER 368
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFN 270
+DDA E M + + + + L + +E A + + + C + +N
Sbjct: 369 WDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCT-VGVVTYN 427
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
L++G+C +D A + + M + P+ ++YT + C + + + EM
Sbjct: 428 ALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDGAAELVAEMLRG 484
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
C P+V+T+ +++ + + EA+++ E+M C P+ Y++L+ ++K +DA
Sbjct: 485 DCPPNVVTFNVLVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDA 544
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+ + +GV P+V+T++++I E A++L +++ +P Y +L
Sbjct: 545 LELLHGLVSKGVSPDVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLG 604
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C++ + +M N + TY L+ GL G L+ A + S+G++
Sbjct: 605 LCKRCEIDNAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVL 662
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 101/222 (45%), Gaps = 3/222 (1%)
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G +PDV T I + CR L+ + G V Y ++ + ++ A
Sbjct: 71 GEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAA 130
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
++ M PD Y+ LI +L GRV DA + +DM ++G PNV+TY ++ +
Sbjct: 131 RRLIGSMPV---APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEA 187
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C S E A+ +L +M C P+ TY ++ CR+ R+ LL + D
Sbjct: 188 MCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPD 247
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+Y +L++GL S + + F EM+ K +P T+ ML
Sbjct: 248 TVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 289
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 5/193 (2%)
Query: 355 ALKVYEKMKS-DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
A+++ E+ S D PD + LI L + GR DA + + G +V YNT++
Sbjct: 59 AVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLV 118
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ C + A +L+ M PD TY PL+++ C + R+ LL M +
Sbjct: 119 AGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQ 175
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKER 532
+ TY L+ + + E A + +EM +KG P TY ++ + + R+ +A+E
Sbjct: 176 PNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREL 235
Query: 533 INKLLAHAKEQKT 545
+N+L ++ + T
Sbjct: 236 LNRLPSYGFQPDT 248
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 99/212 (46%), Gaps = 3/212 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ L R D A E M + + +VL+ + +E A ++ +
Sbjct: 457 TYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVEQM 516
Query: 259 KD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ C P + +N L+ G K +DA + + + +G SPDV++++ I +E
Sbjct: 517 MEHGCTP-NLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDR 575
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ +Q+ G +P + Y ++ L K +I+ A+ + M S+ C+P+ S Y
Sbjct: 576 IEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYII 635
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
LI L+ G +K+A ++ + +GV+ LT
Sbjct: 636 LIEGLAHEGLLKEAQDLLSVLCSRGVLNKNLT 667
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 186/365 (50%), Gaps = 5/365 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELV-KEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G+M YN ++D +SK+ E V KEM E + ++ T + ++R G D
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLE-SQVSPNVFTYNILIRGFCFAGNID 222
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
A+ F M+ G + + L+D K ++ +K+ + K P + +N++
Sbjct: 223 VALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEP-NLISYNVV 281
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I+G C+ ++ + + EM ++G+S D V+Y I+ YC+E +F + EM G
Sbjct: 282 INGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
PSVITYT ++H++ KA +N A++ ++M+ P+ Y++L+ S+ G + +A
Sbjct: 342 TPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ +M G P+V+TYN +I+ C + E+A+ +L+ M+E PD +Y+ +L C
Sbjct: 402 VLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFC 461
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
R + + M + + D TY+SL++G E + + AC +EEM+ G+ P
Sbjct: 462 RSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEF 521
Query: 513 TYKML 517
TY L
Sbjct: 522 TYTAL 526
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 173/344 (50%), Gaps = 2/344 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T +T++ + + DD + R M G+E + + +V+++ L + ++ V
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVL 298
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E + L +N LI G+CK A EM + G +P V++YT I C+
Sbjct: 299 TEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKA 358
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + + L +M+ +G P+ TYT ++ + +NEA +V +M + P Y
Sbjct: 359 GNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTY 418
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI G+++DA + EDMK++G+ P+V++Y+T++S C + + AL++ ++M E
Sbjct: 419 NALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
KPD TY+ L++ C ++R K L M + + D TY +L+ G LE
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEK 538
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLL 537
A EM+ KG++P TY +L L K+ R AK + KL
Sbjct: 539 ALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 109/411 (26%), Positives = 193/411 (46%), Gaps = 22/411 (5%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMR 205
F + GY YNT++ G K+ LV + L +G S+ T ++++
Sbjct: 296 FVLTEMNRRGYSLDEVTYNTLIK--GYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 353
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPL 264
+ + G + A+E M+ G+ + R + L+D + + AY+V E D
Sbjct: 354 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSP 413
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
S +N LI+G C T K++DA +++M ++G SPDVVSY+ + +CR D +
Sbjct: 414 SVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+EM EKG KP ITY+ ++ + ++ EA +YE+M PD Y++LI
Sbjct: 474 REMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCME 533
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G ++ A ++ +M ++GV+P+V+TY+ +I+ +S A +LL K+ + P TY
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Query: 445 APLLKMC---------------CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
L++ C C K M + + M + D Y ++ G +
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHA 540
G + A + ++EM+ G + + T L + L K+ G E +N ++ H
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKE--GKVNE-LNSVIVHV 701
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 182/376 (48%), Gaps = 29/376 (7%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL--ATMSTIMRRLVRGGRYDDAVEAFR 221
YN +++ L + + M E+ + E+N SL T +T+++ + G + A+
Sbjct: 278 YNVVINGLCREGR---MKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL-----SSQIFNILIHGW 276
M ++G+ + L+ ++ K ++ A +EF D + + + + + L+ G+
Sbjct: 335 EMLRHGLTPSVITYTSLIHSMCKAGNMNRA----MEFLDQMRVRGLCPNERTYTTLVDGF 390
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ +++A + ++EM GFSP VV+Y I +C L++M+EKG P V
Sbjct: 391 SQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDV 450
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
++Y+ V+ ++ ++EAL+V +M PDT YSSLI + R K+A +++E+
Sbjct: 451 VSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEE 510
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M + G+ P+ TY +I++ C + E AL+L +M E PD TY+ L+ ++ R
Sbjct: 511 MLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSR 570
Query: 457 MKVLNFLLTHMF---------------KNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
+ LL +F +N +++ + SL++G G + A FE
Sbjct: 571 TREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFES 630
Query: 502 MISKGIVPYHSTYKML 517
M+ K P + Y ++
Sbjct: 631 MLGKNHKPDGTAYNIM 646
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 138/289 (47%), Gaps = 4/289 (1%)
Query: 249 EHAYKVFLEFKDCIPL---SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
E+A VF ++ L +S +F++++ + + +D A + GF P V+SY
Sbjct: 114 EYASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYN 173
Query: 306 CFIEHYCREK-DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
++ R K + ++ KEM E P+V TY I++ A I+ AL +++KM++
Sbjct: 174 AVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMET 233
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
CLP+ Y++LI K ++ D ++ M +G+ PN+++YN +I+ C +
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
+L +M D TY L+K C++ + M ++ ++ TY SL+
Sbjct: 294 VSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIH 353
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ ++G + A F ++M +G+ P TY L + +K N R+
Sbjct: 354 SMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIP----- 263
G + A++ M + GV D SVL++ L K + A ++ L+ +++ +P
Sbjct: 534 GDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTY 593
Query: 264 --LSSQIFNI-------LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
L NI LI G+C + +A + + M + PD +Y I +CR
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRA 653
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
D RK KEM + G +T ++ AL K ++NE V + L +
Sbjct: 654 GDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQA 713
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
L+ I + G + ++ +M K G +PN
Sbjct: 714 KVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
Group]
gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
sativa Japonica Group]
gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
Length = 742
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 199/405 (49%), Gaps = 15/405 (3%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
N L P FG A T +YN +++VL + K L+ + EM +
Sbjct: 134 NQLQPLFGI--QADTV--------VYNHLLNVLVEGSKMKLLESVYSEMGA-RGIKPDVV 182
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T+M+ L R + AV M GV D + LM V+ S+E A +V
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242
Query: 259 KDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ ++++ N+LI+G+CK +V+DA +++ GF PD ++Y F+ C+
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ M ++G P V TY IV++ L K Q+ EA + +M CLPD + +++L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L R+++A ++ + +GV P+V T+N +I++ C + AL+L ++M+ C
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422
Query: 438 KPDCETYAPLL-KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY L+ +C K K L+ LL M TY +++ GL + ++E A
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALD-LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHA 540
F++M +GI T+ L + L K K++ +A E IN++++
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 219/476 (46%), Gaps = 19/476 (3%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL 118
+PDE + G+VE + R+ +R+L E + +L Y +V +AL
Sbjct: 213 APDETTFTTLMQGFVEEGSIEAALRVKARML-EMGCSATKVTVNVLINGYCKLGRVEDAL 271
Query: 119 KGCGVSVSNSLV--EQTLRRFSNDLTPAFGFFTWAK-----TQTGYMHTPEM--YNTMVD 169
+++ + T F N L K Q G H P++ YN +V+
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG--HDPDVFTYNIVVN 329
Query: 170 VLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV 228
L K+ + ++ +M ++ G + + T +T++ L G R ++A++ R + GV
Sbjct: 330 CLCKNGQLEEAKGILNQM--VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQ 286
D ++L++ L K A ++F E K+ C P +N LI C K+ A
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP-DEVTYNTLIDNLCSLGKLGKAL 446
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
+K+M G ++Y I+ C++ + ++ +M +G + IT+ ++ L
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
K K+I++A ++ +M S+ P+ Y+S++ K G +K A +I E M G +V
Sbjct: 507 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 566
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+TY T+I+ C + ALK+L+ M +P + Y P+L+ R+ ++ L
Sbjct: 567 VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 626
Query: 467 MFKNDVSMDAGTYASLVRGLIESGK-LELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M + DA TY + RGL G ++ A F EM+ KG +P S+++ML E L
Sbjct: 627 MAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 162/328 (49%), Gaps = 3/328 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T + L + A++ M + G + D +++++ L K +E A + +
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 259 KD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
D C+P FN LI C ++++A +++ +G SPDV ++ I C+ D
Sbjct: 348 VDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 406
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+EM+ GC P +TY ++ L ++ +AL + + M+S C T Y++
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L K R+++A E+F+ M QG+ N +T+NT+I C + ++A +L+ +M +
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+P+ TY +L C++ +K +L M N +D TY +L+ GL ++G+ ++A
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M KG+ P Y + + L ++
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRR 614
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 173/392 (44%), Gaps = 4/392 (1%)
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
T R D A A + + PE+Y ++ LG LM LV EM +
Sbjct: 46 TALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGH 105
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK--YGVEKDTRALSVLMDTLVKGNSVEH 250
V L + + + +DDAV+ + +G++ DT + L++ LV+G+ ++
Sbjct: 106 -QVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 251 AYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
V+ E I FN L+ C+ +V A ++EM +G +PD ++T ++
Sbjct: 165 LESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQ 224
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
+ E M E GC + +T ++++ K ++ +AL ++ +D P
Sbjct: 225 GFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEP 284
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D Y++ + L + V A ++ + M ++G P+V TYN +++ C + E A +L
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M + C PD T+ L+ C R++ L + VS D T+ L+ L +
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
G LA FEEM + G P TY L + L
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436
>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Brachypodium distachyon]
Length = 878
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/386 (28%), Positives = 188/386 (48%), Gaps = 5/386 (1%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VS 196
+N L A F A ++ G Y +++D LGK K + L ++M L+ G+ +
Sbjct: 433 ANQLEEAHRIFESA-SERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKM--LDAGHDAN 489
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
++++R GR +D + ++ M + G D L+ MD + K VE +F
Sbjct: 490 PIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFE 549
Query: 257 EFKDCIPLSS-QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ K L + ++ILIHG K + + + M QQGF+ D +Y ++ C+
Sbjct: 550 DMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSG 609
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
K + L+EM+ K P+V TY ++ L K +++EA ++E+ KS + YS
Sbjct: 610 KVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYS 669
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
SLI K GR+ +A I E+M K+G+ PNV T+N+++ + E + AL Q M+E
Sbjct: 670 SLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEM 729
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C P+ TY+ L+ CR ++ M K + + TY +++ GL + G + A
Sbjct: 730 KCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDA 789
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKL 521
S FE + G +P +++ L E +
Sbjct: 790 YSLFERFKTNGGIPDSASFNALIEGM 815
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 181/365 (49%), Gaps = 11/365 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N+++ LGK +K L M + + +++T + I+ L GR ++A + M
Sbjct: 354 FNSILTCLGKKRKVDEALTLFDVMKK--DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEM 411
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ G+ + ++++++D L K N +E A+++F + C P +S + LI G K K
Sbjct: 412 ELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNP-NSVTYCSLIDGLGKKGK 470
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHY---CREKDFRKVDDTLKEMQEKGCKPSVIT 338
+DDA + ++M G + + YT I ++ R++D K+ KEM +G +P +
Sbjct: 471 IDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKI---YKEMIRRGGRPDLTL 527
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
M + KA ++ + ++E MKS LPD YS LI L+KAG+ ++ + IF+ M
Sbjct: 528 LNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMS 587
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+QG + YN ++ C + + A ++L++M+ P TY ++ + R+
Sbjct: 588 QQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLD 647
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
L + ++ Y+SL+ G + G+++ A EEM+ KG+ P T+ L
Sbjct: 648 EAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLM 707
Query: 519 EKLEK 523
+ L K
Sbjct: 708 DALVK 712
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 193/455 (42%), Gaps = 76/455 (16%)
Query: 126 SNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVK 185
++ +V LR N + A FF A + P+ YN ++ L S + ++++
Sbjct: 74 AHDVVVYVLRSLKNP-SLAAPFFLLASASSSQPLPPDAYNAVLPFL--SHDLAALEKVLE 130
Query: 186 EMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
EM L G + A + ++ LVR R +DA M+ A +VL+ L +
Sbjct: 131 EMSHLGYGLPNPAC-AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGALAEA 189
Query: 246 NSVEHAYKVFLEFKDC-----IPLSSQ-------------------------------IF 269
E A ++ + +D +PL + ++
Sbjct: 190 RQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIVLY 249
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR---------------- 313
N+ I + K VD A K E+ G PD VSYT + C+
Sbjct: 250 NVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEA 309
Query: 314 EKDF----------------RKVDDT---LKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
E+D + DD L+ ++E+GC PSV+++ ++ LGK ++++E
Sbjct: 310 ERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDE 369
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
AL +++ MK D P+ S Y+ +I +L AGRV +A +I ++M+ G+ PN+L+ N M+
Sbjct: 370 ALTLFDVMKK-DAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVD 428
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C ++ E A ++ + E C P+ TY L+ +K ++ L M
Sbjct: 429 RLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDA 488
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ Y SL+R G+ E ++EMI +G P
Sbjct: 489 NPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRP 523
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 170/360 (47%), Gaps = 1/360 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y +MV VL K+ + EL +M+ + + A + IM R+DDA + +
Sbjct: 284 YTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMG-YGSAERFDDAYKLLERL 342
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
++ G + + ++ L K V+ A +F K + +NI+I C +V+
Sbjct: 343 RERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVN 402
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+A K EM G P+++S ++ C+ + + E+GC P+ +TY ++
Sbjct: 403 EAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLI 462
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
LGK +I++A +++EKM + Y+SLI GR +D ++I+++M ++G
Sbjct: 463 DGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGR 522
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P++ NT + E E + + M+ PD +Y+ L+ + + + + +
Sbjct: 523 PDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNI 582
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
M + ++DA Y ++V GL +SGK++ A EEM K + P +TY + + L K
Sbjct: 583 FQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAK 642
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 139/259 (53%), Gaps = 2/259 (0%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A +Q G+ YN +VD L KS K +E+++EM ++ + + ++AT +I+ L +
Sbjct: 585 AMSQQGFALDARAYNAVVDGLCKSGKVDKAYEVLEEM-KVKHVHPTVATYGSIVDGLAKI 643
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIF 269
R D+A F K G+E + S L+D K ++ AY + E K + + +
Sbjct: 644 DRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTW 703
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N L+ KT ++D+A + M + SP+ +Y+ I CR + + K +EMQ+
Sbjct: 704 NSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQK 763
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+G P+V+TYT ++ L K I +A ++E+ K++ +PD++ +++LI +S A R +
Sbjct: 764 QGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPME 823
Query: 390 ANEIFEDMKKQGVVPNVLT 408
A ++FE+ + +G NV T
Sbjct: 824 AYQVFEETRLRGCRLNVKT 842
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 155/326 (47%), Gaps = 13/326 (3%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-----LEFKDCIPLSSQIFNILIHGWC 277
M G A + L+ TLV+ +E A++V L+F+ P S+ + +LI
Sbjct: 132 MSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRP--PFSA--YTVLIGALA 187
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ R+ + A + +++M G+ V +T + RE + E++ +P ++
Sbjct: 188 EARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDIV 247
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y + + GKA ++ A K + ++K+ PD Y+S++++L KAGR+ +A E+F M
Sbjct: 248 LYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQM 307
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ + VP YNTMI + ++A KLL+++ E C P ++ +L C KKR
Sbjct: 308 EAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILT-CLGKKRK 366
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + K D + TY ++ L +G++ A +EM G+ P + ++
Sbjct: 367 VDEALTLFDVMKKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIM 426
Query: 518 EEKLEKKRLGNAKERINKLLAHAKEQ 543
++L K N E +++ A E+
Sbjct: 427 VDRLCK---ANQLEEAHRIFESASER 449
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 129/249 (51%), Gaps = 1/249 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ L + G+ D A E MK V ++D L K + ++ AY +F E K
Sbjct: 599 NAVVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKS 658
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
I L+ +++ LI G+ K ++D+A ++EM ++G +P+V ++ ++ + ++ +
Sbjct: 659 KGIELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDE 718
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ M+E C P+ TY+I+++ L + ++ N+A +++M+ +P+ Y+++I
Sbjct: 719 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMIS 778
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L+K G + DA +FE K G +P+ ++N +I + A ++ ++ C+
Sbjct: 779 GLAKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRL 838
Query: 440 DCETYAPLL 448
+ +T LL
Sbjct: 839 NVKTCISLL 847
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/241 (19%), Positives = 107/241 (44%), Gaps = 2/241 (0%)
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+K ++EM G+ + + R + + M+ +P YT+++ A
Sbjct: 126 EKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGA 185
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
L +A+Q AL++ +M+ +++L+ L++ G+++ A + +++K + P+
Sbjct: 186 LAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPD 245
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
++ YN I + A K +++ +PD +Y ++ + C+ R+ L
Sbjct: 246 IVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFG 305
Query: 466 HM-FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M + DV A Y +++ G + + + A E + +G +P ++ + L KK
Sbjct: 306 QMEAERDVPC-AYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKK 364
Query: 525 R 525
R
Sbjct: 365 R 365
>gi|297795031|ref|XP_002865400.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297311235|gb|EFH41659.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 675
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 187/422 (44%), Gaps = 5/422 (1%)
Query: 98 DKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGY 157
+K+ + ++ + + L G+ +S +V L R + FF WA + G
Sbjct: 83 EKLRGVFLQKLKGKSAIQNCLSSLGIDLSIDIVSDVLNRGNLSGEAMVTFFNWAIREPGV 142
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDD 215
+ Y ++ LG+ K F M ++++ M + +N L ++ M VR
Sbjct: 143 SKDVDSYCVILRALGRRKFFSFMMDVLRGMVCEGVNP---DLRCLTIAMDSFVRAHYVRR 199
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
A+E F + YGV+ T + + L+ L + + V A VF K IP S +NI+I G
Sbjct: 200 AIELFEESESYGVKCSTESFNALLRCLCERSHVSAANSVFNAKKGKIPFDSCSYNIMISG 259
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
W K +++ +K +KEM + GF PD +SY+ IE R + M+ KG
Sbjct: 260 WSKLGEIEGMEKVLKEMVEGGFVPDCLSYSHLIEGLGRAGRINDSVEIFDNMKHKGSVLD 319
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
Y ++ A+ +E+++ Y +M ++C P+ YS L+ L K +V DA EIFE
Sbjct: 320 ANVYNAMICNFISARDFDESMRYYRRMLDEECEPNLETYSKLVSGLIKGRKVSDALEIFE 379
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M +G++P + + C+ A+ + QK + C+ Y LLK R
Sbjct: 380 EMLSRGILPTTGLVTSFLKPLCSYGPPHAAMVIYQKSRKAGCRISESAYKLLLKRLSRFG 439
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ +L + M + D Y +V GL G LE A EE + KG P Y
Sbjct: 440 KCGMLLNVWDEMQECGYPSDVEVYEYIVDGLCIIGHLENAVLVMEEAMRKGFCPNRFVYS 499
Query: 516 ML 517
L
Sbjct: 500 RL 501
>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
Length = 742
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 199/405 (49%), Gaps = 15/405 (3%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
N L P FG A T +YN +++VL + K L+ + EM +
Sbjct: 134 NQLQPLFGI--QADTV--------VYNHLLNVLVEGSKMKLLESVYSEMGA-RGIKPDVV 182
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T+M+ L R + AV M GV D + LM V+ S+E A +V
Sbjct: 183 TFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242
Query: 259 KDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ ++++ N+LI+G+CK +V+DA +++ GF PD ++Y F+ C+
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ M ++G P V TY IV++ L K Q+ EA + +M CLPD + +++L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L R+++A ++ + +GV P+V T+N +I++ C + AL+L ++M+ C
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422
Query: 438 KPDCETYAPLL-KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY L+ +C K K L+ LL M TY +++ GL + ++E A
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALD-LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHA 540
F++M +GI T+ L + L K K++ +A E IN++++
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 219/476 (46%), Gaps = 19/476 (3%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL 118
+PDE + G+VE + R+ +R+L E + +L Y +V +AL
Sbjct: 213 APDETTFTTLMQGFVEEGSIEAALRVKARML-EMGCSATKVTVNVLINGYCKLGRVEDAL 271
Query: 119 KGCGVSVSNSLV--EQTLRRFSNDLTPAFGFFTWAK-----TQTGYMHTPEM--YNTMVD 169
+++ + T F N L K Q G H P++ YN +V+
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG--HDPDVFTYNIVVN 329
Query: 170 VLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV 228
L K+ + ++ +M ++ G + + T +T++ L G R ++A++ R + GV
Sbjct: 330 CLCKNGQLEEAKGILNQM--VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQ 286
D ++L++ L K A ++F E K+ C P +N LI C K+ A
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP-DEVTYNTLIDNLCSLGKLGKAL 446
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
+K+M G ++Y I+ C++ + ++ +M +G + IT+ ++ L
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
K K+I++A ++ +M S+ P+ Y+S++ K G +K A +I E M G +V
Sbjct: 507 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 566
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+TY T+I+ C + ALK+L+ M +P + Y P+L+ R+ ++ L
Sbjct: 567 VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 626
Query: 467 MFKNDVSMDAGTYASLVRGLIESGK-LELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M + DA TY + RGL G ++ A F EM+ KG +P S+++ML E L
Sbjct: 627 MAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 162/328 (49%), Gaps = 3/328 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T + L + A++ M + G + D +++++ L K +E A + +
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 259 KD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
D C+P FN LI C ++++A +++ +G SPDV ++ I C+ D
Sbjct: 348 VDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 406
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+EM+ GC P +TY ++ L ++ +AL + + M+S C T Y++
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L K R+++A E+F+ M QG+ N +T+NT+I C + ++A +L+ +M +
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 526
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+P+ TY +L C++ +K +L M N +D TY +L+ GL ++G+ ++A
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M KG+ P Y + + L ++
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRR 614
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 173/392 (44%), Gaps = 4/392 (1%)
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
T R D A A + + PE+Y ++ LG LM LV EM +
Sbjct: 46 TALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGH 105
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK--YGVEKDTRALSVLMDTLVKGNSVEH 250
V L + + + +DDAV+ + +G++ DT + L++ LV+G+ ++
Sbjct: 106 -QVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 251 AYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
V+ E I FN L+ C+ +V A ++EM +G +PD ++T ++
Sbjct: 165 LESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQ 224
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
+ E M E GC + +T ++++ K ++ +AL ++ +D P
Sbjct: 225 GFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEP 284
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D Y++ + L + V A ++ + M ++G P+V TYN +++ C + E A +L
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M + C PD T+ L+ C R++ L + VS D T+ L+ L +
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
G LA FEEM + G P TY L + L
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436
>gi|255582955|ref|XP_002532248.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528066|gb|EEF30142.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 521
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 208/410 (50%), Gaps = 8/410 (1%)
Query: 109 QSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMV 168
++ +VE + C S + R D A F Q G+ H Y+T++
Sbjct: 42 ETSSTLVETGRKCKFISHESAINLIKRE--KDPQHALEIFNMVGEQKGFNHNHATYSTLI 99
Query: 169 DVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV 228
L ++KKF + L+ +M + ++ +M+ + ++ +E F ++
Sbjct: 100 HKLAQTKKFHAVDALLHQMTYETCKFHENIFLN-LMKHFYKSSLHERVLEMFYAIQPIVR 158
Query: 229 EKDT-RALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL--SSQIFNILIHGWCKTRKVDDA 285
EK + +A+S ++ LV+ ++ A K L + + + ++ IFNIL+ CK+ ++ A
Sbjct: 159 EKPSLKAISTCLNILVESKQIDLAQKCLLYVNEHLKVRPNTCIFNILVKHHCKSGDLESA 218
Query: 286 QKAMKEMFQQGFS-PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-CKPSVITYTIVM 343
+ M EM + S P+V++Y+ I+ C ++ + +EM K P +TY++++
Sbjct: 219 LEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEEMVSKDQILPDALTYSVLI 278
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ + A K+ E M+S+ C P+ YS L+ K GR+++A E+F++MK G+
Sbjct: 279 KGFCHGGKADRARKIMEFMRSNGCDPNVFNYSVLMNGFCKEGRLEEAKEVFDEMKSSGLK 338
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P+ + Y T+I+ C + A++LL++M E CK D T+ LLK CR+ R +
Sbjct: 339 PDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAVTFNVLLKGLCREGRFDEALRM 398
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
L ++ V ++ G+Y ++ L + G+LE +C+ M+S+G VP+++T
Sbjct: 399 LENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYAT 448
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 146/300 (48%), Gaps = 8/300 (2%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N +V KS E++ EM + Y ++ T ST++ L GR +A+E F
Sbjct: 201 IFNILVKHHCKSGDLESALEVMHEMKKSRRSYPNVITYSTLIDGLCGNGRLKEAIELFEE 260
Query: 223 M-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDCIPLSSQIFN--ILIHGWC 277
M K + D SVL+ G + A K+ F+ C P +FN +L++G+C
Sbjct: 261 MVSKDQILPDALTYSVLIKGFCHGGKADRARKIMEFMRSNGCDP---NVFNYSVLMNGFC 317
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K ++++A++ EM G PD V YT I +C + + LKEM E CK +
Sbjct: 318 KEGRLEEAKEVFDEMKSSGLKPDTVGYTTLINCFCGVGRIDEAMELLKEMTEMKCKADAV 377
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
T+ +++ L + + +EAL++ E + + + Y ++ L + G ++ + + M
Sbjct: 378 TFNVLLKGLCREGRFDEALRMLENLAYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLM 437
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+G VP+ T N ++ C +NA+ L + + P+ +++A L++ CR++++
Sbjct: 438 LSRGFVPHYATSNELLVCLCEAGMVDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKL 497
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 82/169 (48%), Gaps = 4/169 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+++ + EL+KEM E+ T + +++ L R GR+D+A+ +
Sbjct: 344 YTTLINCFCGVGRIDEAMELLKEMTEMKCK-ADAVTFNVLLKGLCREGRFDEALRMLENL 402
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
GV + + ++++ L + +E + + + + +P + +L+ C+
Sbjct: 403 AYEGVYLNKGSYRIVLNFLCQKGELEKSCALLGLMLSRGFVPHYATSNELLV-CLCEAGM 461
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
VD+A A+ + Q GF+P+ S+ IE+ CRE+ V + + E+ EK
Sbjct: 462 VDNAVTALFGLTQMGFTPEPKSWAHLIEYICRERKLLFVFELVDELVEK 510
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 111/447 (24%), Positives = 226/447 (50%), Gaps = 10/447 (2%)
Query: 105 SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMY 164
S + S +++ LK G S+ N+ TL + + + + G+ Y
Sbjct: 68 SSSFDSITTLLKQLKSSG-SIPNATTFATLIQSFTNFHEIENLLKILENELGFKPDTNFY 126
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGM 223
N ++ L + K L+ L +M +N G V ++T + +++ L + + A+ M
Sbjct: 127 NIALNALVEDNKLKLVEMLHSKM--VNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEM 184
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKV---FLEFKDCIPLSSQIFNILIHGWCKTR 280
+G++ D + LM ++ + A K+ L + C+ L++ +L++G+CK
Sbjct: 185 ANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGY-GCL-LTNVSVKVLVNGFCKEG 242
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+V++A + + E+ ++GFSPD V++ + +CR + D + M EKG P V TY
Sbjct: 243 RVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYN 302
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ + K + +A+++ ++M +C P+T Y++LI L K ++ A ++ + +
Sbjct: 303 SLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSK 362
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G++P+V T+NT+I C ++ A+++ ++M+ CKPD TY+ L+ C ++R+K
Sbjct: 363 GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 422
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
LL M + + +A Y +L+ GL +S ++E A F++M G+ TY L +
Sbjct: 423 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDG 482
Query: 521 L-EKKRLGNAKERINKLLAHAKEQKTF 546
L + KR+ A + +++++ + F
Sbjct: 483 LCKNKRVEEASQLMDQMIMEGLKPDKF 509
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 125/479 (26%), Positives = 224/479 (46%), Gaps = 19/479 (3%)
Query: 60 PDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKIS---KILSKQYQSPDKVV- 115
PD +F +L VE ++L + S++++E DV + K L K +Q ++
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILM 180
Query: 116 -EALKGCGVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGY--MHTPEMYNTMVDV 170
E + G+ ++ F DL G K GY + T +V+
Sbjct: 181 LEEMANHGLKPDEITFTTLMQGFIEEGDLN---GALKMKKQMLGYGCLLTNVSVKVLVNG 237
Query: 171 LGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
K + V E+ E G+ T ++++ R G +DA++ M + G +
Sbjct: 238 FCKEGRVEEALRFVLEVSE--EGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFD 295
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
D + L+ + K E A ++ + ++C P ++ +N LI CK +++ A
Sbjct: 296 PDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSP-NTVTYNTLISALCKENEIEAATD 354
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+ + +G PDV ++ I+ C K+ + +EM+ KGCKP TY+I++ +L
Sbjct: 355 LARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLC 414
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
+++ EAL + ++M+S C + Y++LI L K+ R++DA EIF+ M+ GV + +
Sbjct: 415 YERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSV 474
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
TYNT+I C E A +L+ +M + KPD TY LL CR ++ ++ M
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM 534
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV-PYHSTYKMLEEKLEKKR 525
N D TY +L+ GL +G++++A + KGIV H+ +++ +KR
Sbjct: 535 ASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKR 593
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 184/377 (48%), Gaps = 14/377 (3%)
Query: 148 FTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN----NGY-VSLATMST 202
F ++ G+ +N++V+ FC + + +D ++ G+ + T ++
Sbjct: 250 FVLEVSEEGFSPDQVTFNSLVN------GFCRIGNVNDALDIVDFMIEKGFDPDVYTYNS 303
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKD 260
++ + + G ++ A+E + M +T + L+ L K N +E A + L K
Sbjct: 304 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKG 363
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
+P FN LI G C ++ D A + +EM +G PD +Y+ I+ C E+ ++
Sbjct: 364 LLP-DVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 422
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
LKEM+ GC + + Y ++ L K+++I +A +++++M+ + Y++LI
Sbjct: 423 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDG 482
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K RV++A+++ + M +G+ P+ TYN++++ C + E A ++Q M + C+PD
Sbjct: 483 LCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ CR R+ V + LL + + + Y +++ L + + F
Sbjct: 543 IFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFR 602
Query: 501 EMISKGIVPYHSTYKML 517
EM+ K P T+K++
Sbjct: 603 EMMEKSDPPDALTHKIV 619
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 162/361 (44%), Gaps = 40/361 (11%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++ L K + +L + + ++ G + + T +T+++ L D A+E F
Sbjct: 336 YNTLISALCKENEIEAATDLARIL--VSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEE 393
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
MK G + D S+L+D+L ++ A + +E C ++ ++N LI G CK+R
Sbjct: 394 MKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGC-ARNAVVYNTLIDGLCKSR 452
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+++DA++ +M G S V+Y I+ C+ K + + +M +G KP TY
Sbjct: 453 RIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYN 512
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ + I +A + + M S+ C PD Y +LI L +AGRV A+++ ++ +
Sbjct: 513 SLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMK 572
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+V YN +I + R + ++L ++M E PD T+ + + C
Sbjct: 573 GIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNG------ 626
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
G ++ A F EM+ KGI+P ++ L E
Sbjct: 627 ----------------------------GGPIQEAIDFTVEMLEKGILPEFPSFGFLAEG 658
Query: 521 L 521
L
Sbjct: 659 L 659
>gi|357455405|ref|XP_003597983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487031|gb|AES68234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 196/400 (49%), Gaps = 19/400 (4%)
Query: 125 VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV 184
V ++ V TL F+ND A FF W +T+ + H+ E YN ++D+LGK +F W L+
Sbjct: 74 VDHTTVRATLTSFNNDYKRALEFFNWVETKFKFQHSTETYNLVLDILGKFFEFQQCWNLI 133
Query: 185 KEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL-- 242
M + + + T + +R V DAV F+ + ++ + KD + S L+D L
Sbjct: 134 HRMRQNPHSLPNHTTFRVMFKRYVSAHCVQDAVNTFQRLNEFNL-KDETSFSNLIDALCE 192
Query: 243 ----------VKGNSVEHAYKVFLEFKDCIPLSSQ---IFNILIHGWCKTRKVDDAQKAM 289
V G+ ++ D SS+ IFNI++ GW K +
Sbjct: 193 YKHVLEAQDLVFGDKKNQTLTWIVDGVDGFVASSKNTKIFNIVLRGWYKLGWWSKCWEFW 252
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
EM ++G D+ SY+ +++ + K KEM+ KG + V+ Y IV+ A+G +
Sbjct: 253 DEMDRRGVEKDLHSYSIYMDILSKGGKPWKAVKLFKEMKRKGIQLDVVVYNIVIRAIGVS 312
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+ ++ +++++ +MK P Y+++I +L + R K+A + M++ G PN ++Y
Sbjct: 313 QGVDFSIRMFCEMKDLGLNPTVVTYNTIIRLLCDSYRYKEALTLIRTMRRDGCSPNAVSY 372
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
AC + + ++L M E +P +TY LLK R ++++ + M +
Sbjct: 373 QCFF--ACL-EKPKFIIELFDGMIESGVRPTMDTYVMLLKKFARWGFLRLVFLVWNRMEE 429
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
S DA Y +L+ L+E G +++A + EEM++KG+ P
Sbjct: 430 LGCSPDASAYNALIDALVEKGLIDMARKYDEEMLAKGLSP 469
>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
Length = 650
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/405 (28%), Positives = 199/405 (49%), Gaps = 15/405 (3%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
N L P FG A T +YN +++VL + K L+ + EM +
Sbjct: 42 NQLQPLFGI--QADTV--------VYNHLLNVLVEGSKMKLLESVYSEMGA-RGIKPDVV 90
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T+M+ L R + AV M GV D + LM V+ S+E A +V
Sbjct: 91 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 150
Query: 259 KDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ ++++ N+LI+G+CK +V+DA +++ GF PD ++Y F+ C+
Sbjct: 151 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 210
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ M ++G P V TY IV++ L K Q+ EA + +M CLPD + +++L
Sbjct: 211 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 270
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L R+++A ++ + +GV P+V T+N +I++ C + AL+L ++M+ C
Sbjct: 271 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 330
Query: 438 KPDCETYAPLL-KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY L+ +C K K L+ LL M TY +++ GL + ++E A
Sbjct: 331 TPDEVTYNTLIDNLCSLGKLGKALD-LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 389
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHA 540
F++M +GI T+ L + L K K++ +A E IN++++
Sbjct: 390 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 434
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 219/476 (46%), Gaps = 19/476 (3%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL 118
+PDE + G+VE + R+ +R+L E + +L Y +V +AL
Sbjct: 121 APDETTFTTLMQGFVEEGSIEAALRVKARML-EMGCSATKVTVNVLINGYCKLGRVEDAL 179
Query: 119 KGCGVSVSNSLV--EQTLRRFSNDLTPAFGFFTWAK-----TQTGYMHTPEM--YNTMVD 169
+++ + T F N L K Q G H P++ YN +V+
Sbjct: 180 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG--HDPDVFTYNIVVN 237
Query: 170 VLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV 228
L K+ + ++ +M ++ G + + T +T++ L G R ++A++ R + GV
Sbjct: 238 CLCKNGQLEEAKGILNQM--VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 295
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQ 286
D ++L++ L K A ++F E K+ C P +N LI C K+ A
Sbjct: 296 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP-DEVTYNTLIDNLCSLGKLGKAL 354
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
+K+M G ++Y I+ C++ + ++ +M +G + IT+ ++ L
Sbjct: 355 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 414
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
K K+I++A ++ +M S+ P+ Y+S++ K G +K A +I E M G +V
Sbjct: 415 CKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 474
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+TY T+I+ C + ALK+L+ M +P + Y P+L+ R+ ++ L
Sbjct: 475 VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 534
Query: 467 MFKNDVSMDAGTYASLVRGLIESGK-LELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M + DA TY + RGL G ++ A F EM+ KG +P S+++ML E L
Sbjct: 535 MAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 590
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 162/328 (49%), Gaps = 3/328 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T + L + A++ M + G + D +++++ L K +E A + +
Sbjct: 196 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 255
Query: 259 KD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
D C+P FN LI C ++++A +++ +G SPDV ++ I C+ D
Sbjct: 256 VDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 314
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+EM+ GC P +TY ++ L ++ +AL + + M+S C T Y++
Sbjct: 315 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 374
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L K R+++A E+F+ M QG+ N +T+NT+I C + ++A +L+ +M +
Sbjct: 375 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEG 434
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+P+ TY +L C++ +K +L M N +D TY +L+ GL ++G+ ++A
Sbjct: 435 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 494
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M KG+ P Y + + L ++
Sbjct: 495 KVLRGMRIKGMRPTPKAYNPVLQSLFRR 522
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/321 (26%), Positives = 150/321 (46%), Gaps = 4/321 (1%)
Query: 213 YDDAVEAFRGMKK--YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIF 269
+DDAV+ + +G++ DT + L++ LV+G+ ++ V+ E I F
Sbjct: 33 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 92
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N L+ C+ +V A ++EM +G +PD ++T ++ + E M E
Sbjct: 93 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 152
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
GC + +T ++++ K ++ +AL ++ +D PD Y++ + L + V
Sbjct: 153 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 212
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A ++ + M ++G P+V TYN +++ C + E A +L +M + C PD T+ L+
Sbjct: 213 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIA 272
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C R++ L + VS D T+ L+ L + G LA FEEM + G P
Sbjct: 273 ALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP 332
Query: 510 YHSTYKMLEEKL-EKKRLGNA 529
TY L + L +LG A
Sbjct: 333 DEVTYNTLIDNLCSLGKLGKA 353
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 187/373 (50%), Gaps = 2/373 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N M++VL K K + V M E + ++ T +TI+ GR + A M
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHM-ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
K+ +E D+ L+ + K +E A K+F E + + S+ I+N LI G+C +
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D A EM ++G SP + +Y I E+ + + +KE+QEKG P ITY I+
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ + +A ++++M + P Y+SL+ +LSK R+K+A+++F+ + +GV
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+P+V+ +N +I C+ S + A +LL+ M+ PD T+ +++ CR+ +++
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L M + + D ++ +L+ G G ++ A EM+ G P TY L + L
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582
Query: 523 KKRLGNAKERINK 535
K + G+ E + K
Sbjct: 583 KNQEGDLAEELLK 595
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 149/318 (46%), Gaps = 1/318 (0%)
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
G+ S +++ R D+A E F MK+ GV + L+ +K N E A+
Sbjct: 147 GFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAW 206
Query: 253 KVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
++ E F+ I S FNI+I+ CK K+ A+ + M G P++V+Y + Y
Sbjct: 207 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGY 266
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C D L M+ + +P TY ++ + K ++ EA K++E+M P
Sbjct: 267 CSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSA 326
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y++LI G + A+ ++M K+G+ P + TYN++I + + A ++++
Sbjct: 327 VIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKE 386
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
++E PD TY L+ CR K L M + + TY SL+ L + +
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446
Query: 492 LELACSFFEEMISKGIVP 509
++ A F+++ S+G++P
Sbjct: 447 MKEADDLFKKITSEGVLP 464
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 160/347 (46%), Gaps = 13/347 (3%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRAL--SVLMDTLVKG----NSVEHAYKVFL 256
++++ + GG + E F + +D S++ D L+K N + A++ F
Sbjct: 119 LLKQALGGGTTNSIREIFEFL---AASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFY 175
Query: 257 EFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
K+ +P + + N L+ + K + + A EMF+ V ++ I C+E
Sbjct: 176 TMKEKGVLP-TIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKE 234
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+K D + M+ G KP+++TY ++H + ++ A + MK PD+ Y
Sbjct: 235 GKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTY 294
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
SLI + K GR+++A++IFE+M ++G+ P+ + YNT+I C + + A +M +
Sbjct: 295 GSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLK 354
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
P TY L+ ++R ++ + + +S DA TY L+ G +
Sbjct: 355 KGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKK 414
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHA 540
A +EM++ GI P TY L L KK R+ A + K+ +
Sbjct: 415 AFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461
>gi|15232517|ref|NP_188138.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75273407|sp|Q9LIL5.1|PP233_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g15200
gi|11994509|dbj|BAB02574.1| unnamed protein product [Arabidopsis thaliana]
gi|332642110|gb|AEE75631.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 112/427 (26%), Positives = 215/427 (50%), Gaps = 6/427 (1%)
Query: 110 SPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVD 169
SP+K+ L CG+ ++ LV + + R +D PA+ Q+ ++ + +YN ++D
Sbjct: 92 SPEKIKRILDKCGIDLTEELVLEVVNRNRSDWKPAYILSQLVVKQSVHLSSSMLYNEILD 151
Query: 170 VLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
VLGK ++F ++ EM + +G+V+ T ++ R + D+AV F K++G++
Sbjct: 152 VLGKMRRFEEFHQVFDEMSK-RDGFVNEKTYEVLLNRYAAAHKVDEAVGVFERRKEFGID 210
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
D A L+ L + VE A +F + + N++++GWC V +A++
Sbjct: 211 DDLVAFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIKAMNMILNGWCVLGNVHEAKRFW 270
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
K++ PDVVSY I ++ K + + M + P V V+ AL
Sbjct: 271 KDIIASKCRPDVVSYGTMINALTKKGKLGKAMELYRAMWDTRRNPDVKICNNVIDALCFK 330
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG--VVPNVL 407
K+I EAL+V+ ++ P+ Y+SL+ L K R + E+ E+M+ +G PN +
Sbjct: 331 KRIPEALEVFREISEKGPDPNVVTYNSLLKHLCKIRRTEKVWELVEEMELKGGSCSPNDV 390
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
T++ ++ + RS++ + +L++M ++ C+ + Y + ++ + + + + + + M
Sbjct: 391 TFSYLLKYS-QRSKDVDI--VLERMAKNKCEMTSDLYNLMFRLYVQWDKEEKVREIWSEM 447
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLG 527
++ + D TY + GL GK+ A S+F+EM+SKG+VP T +L + K R+
Sbjct: 448 ERSGLGPDQRTYTIRIHGLHTKGKIGEALSYFQEMMSKGMVPEPRTEMLLNQNKTKPRVE 507
Query: 528 NAKERIN 534
+ R N
Sbjct: 508 DKMLRSN 514
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/385 (27%), Positives = 199/385 (51%), Gaps = 5/385 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN + +L K+ K L+ L +M + ++T + ++R L + + A+ M
Sbjct: 167 YNVALSLLVKANKLKLVETLHSKMVA-DAVPPDVSTFNILIRALCKAHQLRPAILMLEDM 225
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKV-FLEFKDCIPLSSQIFNILIHGWCKTRKV 282
YG+ D + + LM ++ VE A ++ L + L+S N+L++G CK ++
Sbjct: 226 PNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRI 285
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
++A + + E ++GF PD V++ + CR ++ + + M EKG + V TY +
Sbjct: 286 EEALRFIYE--EEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSL 343
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L K +I+EA+++ M S DC P+T Y++LI L K V+ A E+ + +GV
Sbjct: 344 ISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGV 403
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+P+V T+N++I C S E A++L ++M+E C PD TY+ L++ C ++R+K
Sbjct: 404 LPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALM 463
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
LL M + + + Y +L+ GL ++ ++ A F++M G+ TY L L
Sbjct: 464 LLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLC 523
Query: 523 K-KRLGNAKERINKLLAHAKEQKTF 546
K KR+ A + +++++ + F
Sbjct: 524 KSKRVEEAAQLMDQMIMEGLKPDKF 548
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 168/330 (50%), Gaps = 3/330 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
T + ++ L R G +E M + G E D + L+ L K ++ A ++
Sbjct: 303 VTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVEILHH 362
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ +DC P ++ +N LI CK V+ A + + + +G PDV ++ I+ C
Sbjct: 363 MVSRDCEP-NTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLCLTS 421
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ + +EM+EKGC P TY+I++ +L +++ EAL + ++M+ C + Y+
Sbjct: 422 NREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYN 481
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI L K RV DA +IF+ M+ GV + +TYNT+I+ C E A +L+ +M +
Sbjct: 482 TLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIME 541
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
KPD TY +LK C++ +K ++ +M N D TY +L+ GL ++G++++A
Sbjct: 542 GLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVA 601
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+ KG+V Y + + L K++
Sbjct: 602 SKLLRSVQMKGMVLTPQAYNPVIQALCKRK 631
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/357 (28%), Positives = 181/357 (50%), Gaps = 6/357 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N +V+ L ++ E++ M L G+ + + T ++++ L + G D+AVE
Sbjct: 305 FNALVNGLCRTGHIKQGLEMMDFM--LEKGFELDVYTYNSLISGLCKLGEIDEAVEILHH 362
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDCIPLSSQIFNILIHGWCKTR 280
M E +T + L+ TL K N VE A ++ L K +P FN LI G C T
Sbjct: 363 MVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLP-DVCTFNSLIQGLCLTS 421
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ A + +EM ++G PD +Y+ IE C E+ ++ LKEM+ GC +V+ Y
Sbjct: 422 NREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNVVVYN 481
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L K ++ +A ++++M+ + Y++LI L K+ RV++A ++ + M +
Sbjct: 482 TLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIME 541
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+ TY TM+ C + + + A ++Q M + C+PD TY L+ C+ R+ V
Sbjct: 542 GLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVA 601
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ LL + + + Y +++ L + + + A F EM+ KG P TYK++
Sbjct: 602 SKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIV 658
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/335 (24%), Positives = 163/335 (48%), Gaps = 13/335 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N+++ L + + EL +EM E T S ++ L R +A+ + M
Sbjct: 410 FNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEF-TYSILIESLCSERRLKEALMLLKEM 468
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKV 282
+ G ++ + L+D L K N V A +F + + + SS +N LI+G CK+++V
Sbjct: 469 ELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRV 528
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
++A + M +M +G PD +YT ++++C++ D ++ D ++ M GC+P ++TY +
Sbjct: 529 EEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTL 588
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L KA +++ A K+ ++ + Y+ +I L K R K+A +F +M ++G
Sbjct: 589 IGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGD 648
Query: 403 VPNVLTYNTMISSAC-ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+V+TY + C + A+ +M E P+ ++ L + C L
Sbjct: 649 PPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLI 708
Query: 462 FLLTHMFKNDVSMDAGTYA----SLVRGLIESGKL 492
L+ ++ M+ G ++ S++RG ++ K
Sbjct: 709 QLI------NMVMEKGRFSQSETSIIRGFLKIQKF 737
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/433 (21%), Positives = 165/433 (38%), Gaps = 73/433 (16%)
Query: 134 LRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG 193
L R D + A F WA Q Y P +++ +
Sbjct: 65 LLRRQPDSSSALSLFQWASAQPNYSAHPSVFHEL-------------------------- 98
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE---H 250
+R+L R G +D + R M + D + ++T + + +
Sbjct: 99 ----------LRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEIN 148
Query: 251 AYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+ +E + ++ +N+ + K K+ + +M PDV ++ I
Sbjct: 149 PLFLLMERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRA 208
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
C+ R L++M G +P T+T +M + + AL++ E M C
Sbjct: 209 LCKAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELT 268
Query: 371 TSFYSSLIFILSKAGRVKDA---------------------------------NEIFEDM 397
+ + L+ L K GR+++A E+ + M
Sbjct: 269 SVSVNVLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFM 328
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
++G +V TYN++IS C E + A+++L M C+P+ TY L+ C++ +
Sbjct: 329 LEKGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHV 388
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ L + V D T+ SL++GL + E+A FEEM KG P TY +L
Sbjct: 389 EAATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSIL 448
Query: 518 EEKL-EKKRLGNA 529
E L ++RL A
Sbjct: 449 IESLCSERRLKEA 461
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 124/305 (40%), Gaps = 35/305 (11%)
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+F+ L+ + D +++M D ++ F+E Y + L +
Sbjct: 94 VFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLL 153
Query: 328 QEK--GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
E+ KP Y + + L KA ++ ++ KM +D PD S ++ LI L KA
Sbjct: 154 MERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAH 213
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED---------- 435
+++ A + EDM G+ P+ T+ T++ ++ E AL++ + M E
Sbjct: 214 QLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVN 273
Query: 436 -----LCK------------------PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
LCK PD T+ L+ CR +K ++ M +
Sbjct: 274 VLVNGLCKEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGF 333
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKER 532
+D TY SL+ GL + G+++ A M+S+ P TY L L K+ A
Sbjct: 334 ELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATE 393
Query: 533 INKLL 537
+ ++L
Sbjct: 394 LARVL 398
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 6/173 (3%)
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE---EENALKL 428
S + L+ L++AG + M + + T+ + + E N L L
Sbjct: 93 SVFHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFL 152
Query: 429 LQKMEEDLC-KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L ME D KPD Y L + + ++K++ L + M + V D T+ L+R L
Sbjct: 153 L--MERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALC 210
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHA 540
++ +L A E+M + G+ P T+ L + ++ RI +L+ +
Sbjct: 211 KAHQLRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVES 263
>gi|357504477|ref|XP_003622527.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355497542|gb|AES78745.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 721
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 120/450 (26%), Positives = 214/450 (47%), Gaps = 24/450 (5%)
Query: 73 VESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQ 132
V++ ++N + + S N+ I+ +++ + S E L S+S + V Q
Sbjct: 35 VQTQKINNEVEQQQQPRSRNNSKTAKTIANLINYKPWSD----ELLSSFTTSLSKTTVFQ 90
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
TLR T AF FF W + G+ H P+ Y M+++LG+ K + + +++ +N
Sbjct: 91 TLRHIKVP-TKAFLFFNWIH-EKGFSHNPQTYFIMLEILGREKNLNIARNFLYSIEKRSN 148
Query: 193 GYVSLAT--MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRAL-SVLMDTLVKG--NS 247
G V L ++++R G + ++V+ F MK GV SVL+ L +G N
Sbjct: 149 GEVKLEDRFFNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRTNM 208
Query: 248 VEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
+ Y L+ P + +NILI G+CK VD+ KEM PDVV+Y
Sbjct: 209 AKEVYDEMLKTYGVKP-DTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTL 267
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCK---PSVITYTIVMHALGKAKQINEALKVYEKMKS 364
++ CR + + + M +K CK P V+TYT ++ + ++++EAL + E+M
Sbjct: 268 VDGLCRAGKIKVAHNLVNGMSKK-CKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNG 326
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ-GVVPNVLTYNTMISSACARSEEE 423
P+ Y++LI L +A + EI E MK G +P+ T+NT+I+S C +
Sbjct: 327 RGLKPNIVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLD 386
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD-------A 476
A K+ + M++ D +Y+ L++ C+K L +F+ ++ + A
Sbjct: 387 EAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLA 446
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKG 506
+Y + + L E+GK + A +++ +G
Sbjct: 447 ASYKCMFQYLCENGKTKKAERVLRQLMKRG 476
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/352 (22%), Positives = 155/352 (44%), Gaps = 12/352 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ L +++K+ M E++++M T +T++ G D+A + F M
Sbjct: 336 YNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVFENM 395
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSS-------QIFNILIHG 275
KK V D+ + SVL+ TL + A +F E F+ I LSS + +
Sbjct: 396 KKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSSYGPKPLAASYKCMFQY 455
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
C+ K A++ ++++ ++G + D +SY I +C+E + L M + P
Sbjct: 456 LCENGKTKKAERVLRQLMKRG-TQDPLSYQIVILGHCKEGSYENGYGLLVWMLRRDFLPD 514
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ Y ++ + + A + EKM P TS + S++ L + G V ++ +
Sbjct: 515 IDIYDYLIDGFLRKDKPLLAKETLEKMLKSSYKPQTSTWHSILNRLLEQGCVHESAGVIV 574
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M ++ + N+ + R ++ A K+ + + ++ C +++ C K+
Sbjct: 575 MMLERNIRQNINFSTKCLQLLFDRGLQDKAFKITELIYKN---GFCVKMDEVVQFLCNKR 631
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
R LL KN+ ++D G ++ L + K A S E++ KG+
Sbjct: 632 RALEACKLLLFSLKNNENIDIGLCNIVILDLCKLNKASEAFSLCYELVDKGL 683
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 193/389 (49%), Gaps = 7/389 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G E+YN ++ VL + K L+ EM + T +T++ L R +
Sbjct: 156 GVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSS-QGIEPDVVTFNTVIDALCRARQART 214
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILI 273
AV M V D + LM+ V+ S+E A ++ + C P S + N+LI
Sbjct: 215 AVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTV-NVLI 273
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+G+CK +V DA +++ GF PD V+++ F+ C+ L M ++GC+
Sbjct: 274 NGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE 333
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P V TY+ V++ L ++ EA + +M CLPDT+ +++LI L ++++A ++
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDL 393
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL-KMCC 452
++ +G+ PNV T+N +I++ C + A++L ++M+ C PD TY L+ +C
Sbjct: 394 ARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCS 453
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
K K L+ LL M + TY +++ GL + ++E A F++M GI
Sbjct: 454 SGKLAKALD-LLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAI 512
Query: 513 TYKMLEEKL-EKKRLGNAKERINKLLAHA 540
T+ L + L +R+ +A E ++++++
Sbjct: 513 TFNTLIDGLCNAERIDDAAELVDQMISEG 541
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 161/331 (48%), Gaps = 3/331 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ST + L + G D A++ M + G E D S +++ L +E A + +
Sbjct: 303 TFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQM 362
Query: 259 KD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
D C+P + FN LI C ++++A +E+ +G SP+V ++ I C+ D
Sbjct: 363 VDSGCLP-DTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGD 421
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+EM+ GC P +TY I++ L + ++ +AL + ++M+ C T Y++
Sbjct: 422 PHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNT 481
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L K R+++A E+F+ M G+ N +T+NT+I C ++A +L+ +M +
Sbjct: 482 IIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEG 541
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+P+ TY +L C++ + +L M N +D TYA+L+ GL ++ + + A
Sbjct: 542 LQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAAL 601
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRLG 527
M KG+ P Y + + L + G
Sbjct: 602 KLLRGMRMKGMKPTPKAYNPVIQSLFRGNNG 632
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/361 (28%), Positives = 164/361 (45%), Gaps = 39/361 (10%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ST++ L G ++A M G DT + L+ L N +E A + E
Sbjct: 338 TYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLAREL 397
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K P + FNILI+ CK A + +EM G +PD V+Y I++ C
Sbjct: 398 TVKGLSP-NVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGK 456
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
K D LKEM+ GC S +TY ++ L K ++I EA +V+++M + +++
Sbjct: 457 LAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNT 516
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI L A R+ DA E+ + M +G+ PN +TYN++++ C + A +LQ M +
Sbjct: 517 LIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANG 576
Query: 437 CKPDCETYAPLLKMCCRKKRM-------------------KVLNFLLTHMFKND-----V 472
+ D TYA L+ C+ +R K N ++ +F+ + +
Sbjct: 577 FEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDAL 636
Query: 473 SM-----------DAGTYASLVRGLIESGK-LELACSFFEEMISKGIVPYHSTYKMLEEK 520
S+ DA TY + RGL G ++ A F EM G +P S+++ML E
Sbjct: 637 SLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEG 696
Query: 521 L 521
L
Sbjct: 697 L 697
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 154/369 (41%), Gaps = 36/369 (9%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G + ++Y ++ LG + F LM LV EM + V L + + + R +DD
Sbjct: 85 GLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGH-EVGLGLVQSFIGSYARLQLFDD 143
Query: 216 AVEAFRG-MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
A + + +GV+ +T + L+ L +G+
Sbjct: 144 AFDLVSNQLDMFGVQANTEVYNHLLTVLAEGS---------------------------- 175
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
K+ + A EM QG PDVV++ I+ CR + R L+EM P
Sbjct: 176 ------KIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAP 229
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
T+T +M + I AL++ +M C P + + LI K GRV DA
Sbjct: 230 DETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYI 289
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ G P+ +T++T ++ C ++ALK+L M ++ C+PD TY+ ++ C
Sbjct: 290 QQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNN 349
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ ++ M + D T+ +L+ L +LE A E+ KG+ P T+
Sbjct: 350 GELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTF 409
Query: 515 KMLEEKLEK 523
+L L K
Sbjct: 410 NILINALCK 418
>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 790
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 126/439 (28%), Positives = 203/439 (46%), Gaps = 14/439 (3%)
Query: 90 SENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT 149
SE V ++ +++S + K E L+ S++ LV LR +D A FF
Sbjct: 127 SEFRHPIVREVCRLISLRSNWNPKFEENLRHLLRSLNPRLVCAVLRS-QDDERIALDFFY 185
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
WA Q Y H +Y TM+D+L K+ + C + + S S +M R
Sbjct: 186 WADRQWRYRHDAIVYYTMLDILSKT-RLCQGARRILRLMTRRGIERSPEAFSYVMVSYSR 244
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI- 268
G +A+ M+K GVE D + + LVKGN +E A + FLE + I
Sbjct: 245 AGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALR-FLERMKVAGIEPDIV 303
Query: 269 -FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+N LI G+C ++DDA + + EM +G PD VSY + C+++ +V ++ M
Sbjct: 304 SYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENM 363
Query: 328 -QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
Q P +TY +++AL K ++AL + + D YS+++ K
Sbjct: 364 VQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKN 423
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ A + DM +G P+V+TY +I C + + A K+LQ+M + CKP+ TY
Sbjct: 424 IDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTV 483
Query: 447 LLKMCCRKKR----MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
LL C + +++N H + + +A TY++++ GL GKL AC EM
Sbjct: 484 LLNGLCHNGKSLEAREMINVSEEHWW----TPNAITYSAVMHGLRREGKLSEACDLTREM 539
Query: 503 ISKGIVPYHSTYKMLEEKL 521
I KG +P +L + L
Sbjct: 540 IEKGFLPNPVDINLLIQSL 558
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 178/377 (47%), Gaps = 8/377 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ L K +K + L++ M + +N T +T++ L + G DDA+ R
Sbjct: 340 YYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREA 399
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
++ G D S ++D+ K +++ A + ++ K C P + +I G+C+ K
Sbjct: 400 EEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNP-DVVTYTAIIDGFCRVGK 458
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A+K +++M++ G P+ V+YT + C + + + +E P+ ITY+
Sbjct: 459 IDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSA 518
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
VMH L + +++EA + +M LP+ + LI L + V A + E+ +G
Sbjct: 519 VMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKG 578
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
NV+ + ++I C + + AL +L+ M PD TY L +K R+ +
Sbjct: 579 CAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEAS 638
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ M + TY +++ + G+++ E+MI++ P+ + Y + EKL
Sbjct: 639 ELIVKMLGKGIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQ--PFKTVYNQVIEKL 696
Query: 522 EKKRLGNAKERINKLLA 538
GN +E KLL
Sbjct: 697 --CYFGN-REEAEKLLG 710
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/314 (23%), Positives = 135/314 (42%), Gaps = 35/314 (11%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ +VD K+K LV +M + T + I+ R G+ D+A + + M
Sbjct: 411 YSAVVDSFCKNKNIDKAKSLVIDMYS-KGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQM 469
Query: 224 KKYGVEKDTRALSVLMDTLV-KGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
K+G + +T +VL++ L G S+E + + + ++ ++ ++HG + K+
Sbjct: 470 YKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKL 529
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A +EM ++GF P+ V I+ CR ++ L+E KGC +V+ +T V
Sbjct: 530 SEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSV 589
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ + ++ AL + E M + PD Y++L L K R+ +A+E+ M +G+
Sbjct: 590 IYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGI 649
Query: 403 VPNVLTY---------------------------------NTMISSACARSEEENALKLL 429
P +TY N +I C E A KLL
Sbjct: 650 DPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIARQPFKTVYNQVIEKLCYFGNREEAEKLL 709
Query: 430 QKMEEDLCKPDCET 443
K+ K D +T
Sbjct: 710 GKVLRTASKLDAKT 723
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 122/296 (41%), Gaps = 41/296 (13%)
Query: 278 KTRKVDDAQKAMKEMFQQGF--SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
KTR A++ ++ M ++G SP+ SY + Y R R L MQ+ G +P
Sbjct: 209 KTRLCQGARRILRLMTRRGIERSPEAFSYV--MVSYSRAGMLRNALRILTLMQKAGVEPD 266
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ ++ L K ++ +AL+ E+MK PD Y+ LI R+ DA E+
Sbjct: 267 LSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIA 326
Query: 396 DMKKQG------------------------------------VVPNVLTYNTMISSACAR 419
+M +G ++P+ +TYNT+I +
Sbjct: 327 EMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKH 386
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
++AL L++ EE D Y+ ++ C+ K + L+ M+ + D TY
Sbjct: 387 GHADDALVFLREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTY 446
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERIN 534
+++ G GK++ A ++M G P TY +L L + A+E IN
Sbjct: 447 TAIIDGFCRVGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMIN 502
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 6/159 (3%)
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV--VPNVLTYNTMISSACARSEEENALK 427
D Y +++ ILSK + A I M ++G+ P +Y M+S + A NAL+
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSY-VMVSYSRA-GMLRNALR 253
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+L M++ +PD + + + ++ K L F L M + D +Y L++G
Sbjct: 254 ILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRF-LERMKVAGIEPDIVSYNCLIKGY 312
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+ +++ A EM KG P +Y + L K R
Sbjct: 313 CDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDR 351
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 199/391 (50%), Gaps = 10/391 (2%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWEL 183
S V + L +SND A FF W + ++G+ HT E +N ++D+LGK +F + W L
Sbjct: 44 SYDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWAL 103
Query: 184 VKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
+ M + T + +R V +A++A+ + + + +D + L+D L
Sbjct: 104 INRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNL-RDETSFYNLVDALC 162
Query: 244 KGNSVEHAYKVFLEFKDCIP-----LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
+ V A ++ K+ I +++I N+++ GW K ++ K+M +G +
Sbjct: 163 EHKHVVEAEELCFG-KNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDTEGVT 221
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
D+ SY+ +++ C+ K KEM+ + K V+ Y V+ A+G ++ + ++V
Sbjct: 222 KDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEFGIRV 281
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+ +M+ C P+ + ++++I +L + GR++DA + ++M K+G P+ +TY + S
Sbjct: 282 FREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFSRLEK 341
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
SE L L +M +P +TY L++ R ++ + ++ M ++ + D+
Sbjct: 342 PSE---ILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAA 398
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVP 509
Y +++ LI+ G L++A + EEMI +G+ P
Sbjct: 399 YNAVIDALIQKGMLDMAREYEEEMIERGLSP 429
>gi|224117122|ref|XP_002317482.1| predicted protein [Populus trichocarpa]
gi|222860547|gb|EEE98094.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 197/389 (50%), Gaps = 10/389 (2%)
Query: 125 VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV 184
++ LV + L+R +D PA+ FF W + + +YN ++D+LG+ ++F EL
Sbjct: 1 MTQDLVLKVLKRHRSDWKPAYIFFNWVSKEGTISLSSCVYNEILDILGRMRRF---EELT 57
Query: 185 KEMDELN--NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
+DE++ G+V T ++ R ++A+ AF ++ G+E D + L+ L
Sbjct: 58 LVLDEMSKREGFVDEDTYRVLVNRYAGAHMVEEAIGAFNKRRELGLELDLVSFQKLLMYL 117
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
+ V+ A + + + NI+++GWC V +A++ K++ PDV
Sbjct: 118 CRYKHVDVAETLLHSKGHEFGVDIKTMNIVLNGWCVLGNVREAKRFWKDIIASKCKPDVF 177
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+Y FI+ + + M + CKP V+ V+ AL K++ EAL V+E M
Sbjct: 178 TYGTFIKALTNKGKLGTAMKLYEAMWKMQCKPDVVICNCVIDALCFKKRVPEALAVFEGM 237
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM--KKQGVVPNVLTYNTMISSACARS 420
K C+P+ + Y+SLI + K GR++ E+ ++M KK +P+ +T+N ++ S
Sbjct: 238 KERGCIPNVATYNSLIKHMCKIGRMEKVYELLDEMQEKKGSCMPDEITFNYLLKSL---K 294
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+ E +L++M+ + CK + +T LLK+ + + + M KN + +D +Y
Sbjct: 295 KPEEVAGVLERMKINGCKMNNDTCNLLLKLHADWDSEEKVRYTWEEMEKNGLGLDRRSYT 354
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVP 509
++ L + G++E A +F EM +KG+VP
Sbjct: 355 IMIHWLYDKGRVEDALRYFGEMENKGMVP 383
>gi|242062936|ref|XP_002452757.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
gi|241932588|gb|EES05733.1| hypothetical protein SORBIDRAFT_04g031880 [Sorghum bicolor]
Length = 502
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 159/308 (51%), Gaps = 10/308 (3%)
Query: 212 RYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
R D AV F + + +GV +D + L+D LVK A + + P + +N
Sbjct: 155 RPDHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRALERRFPPDAVTYN 214
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
L GWC+ + A +++M + G +P +Y ++ + R + D +M+++
Sbjct: 215 TLADGWCRVKDTSRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKR 274
Query: 331 G-----CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
G CKP V++YT V+H LG A Q+++A KV+++M + C P + Y++LI + K G
Sbjct: 275 GSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKG 334
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
V+DA +F+DM ++G +PNV+TY +I C + + A+KLL KM+ + C+P+ +TY
Sbjct: 335 NVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYN 394
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSM-DAGTYASLVRGLIESGKLE---LACSFFEE 501
L+ + ++ L M K + + + TY ++ + + E +A E
Sbjct: 395 VLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVE 454
Query: 502 MISKGIVP 509
M+ +G +P
Sbjct: 455 MVDRGYLP 462
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 139/282 (49%), Gaps = 13/282 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+ D + K +++++M E + + T + I++ R G+ A + F M
Sbjct: 213 YNTLADGWCRVKDTSRALDILRQMVE-SGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQM 271
Query: 224 KKYG-----VEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGW 276
KK G + D + + ++ L ++ A KVF E + C P S +N LI
Sbjct: 272 KKRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTP-SIATYNALIQVT 330
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK V+DA +M ++G+ P+VV+YT I C + L +M+ +GC+P+V
Sbjct: 331 CKKGNVEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNV 390
Query: 337 ITYTIVMHALGKAKQINEALKVYEKM-KSDDCLPDTSFYSSLI---FILSKAGRVKDANE 392
TY +++ L + I +AL ++E M K ++CLP+ Y+ +I F+ +A + A
Sbjct: 391 QTYNVLIGYLFEEGDIEKALHLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAAR 450
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ +M +G +P +N +++ +E + +LL+ E+
Sbjct: 451 MVVEMVDRGYLPRRFMFNRVLNGLMLTGNQELSRELLRMQEK 492
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 127/301 (42%), Gaps = 44/301 (14%)
Query: 225 KYGVEKDTRALSVLMDTL-VKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRK 281
++G+ R ++ + V +HA + FL ++ + FN L+ K+R
Sbjct: 132 RHGLAFTPRTFPIMFERFAVSHRRPDHAVRFFLSLHRSHGVAQDLPLFNSLLDALVKSRH 191
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
A ++ + ++ F PD V+Y + +C +V DT
Sbjct: 192 AGKAASLVRAL-ERRFPPDAVTYNTLADGWC------RVKDT------------------ 226
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+ AL + +M P + Y+ ++ ++G+++ A + F MKK+G
Sbjct: 227 -----------SRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRG 275
Query: 402 -----VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
P+V++Y T++ + + A K+ +M + C P TY L+++ C+K
Sbjct: 276 SNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKKGN 335
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ + M + + TY L+RGL +GK++ A ++M +G P TY +
Sbjct: 336 VEDAVAVFDDMIRKGYIPNVVTYTVLIRGLCHAGKIDRAMKLLDKMKREGCEPNVQTYNV 395
Query: 517 L 517
L
Sbjct: 396 L 396
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 83/176 (47%), Gaps = 8/176 (4%)
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+S D ++SL+ L K+ A + ++++ P+ +TYNT+ C +
Sbjct: 168 RSHGVAQDLPLFNSLLDALVKSRHAGKAASLVRALERR-FPPDAVTYNTLADGWCRVKDT 226
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK-VLNFLLTHMFKN----DVSMDAG 477
AL +L++M E P TY +LK R +++ +F L + + D
Sbjct: 227 SRALDILRQMVESGIAPTKTTYNIILKGFFRSGQLQHAWDFFLQMKKRGSNDENCKPDVV 286
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+Y +++ GL +G+L+ A F+EM +G P +TY L + KK GN ++ +
Sbjct: 287 SYTTVLHGLGVAGQLDKARKVFDEMSREGCTPSIATYNALIQVTCKK--GNVEDAV 340
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 185/353 (52%), Gaps = 4/353 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
+ +K+F L+ + K+M ELN ++ T++ ++ R + A + K G E
Sbjct: 75 VASTKQFNLVLDFCKKM-ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 133
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
DT + L++ L + V A + C P + +N +++G CK+ A
Sbjct: 134 DTTTFNTLINGLCLESKVSEAVVLVARMVENGCQP-NVVTYNSIVNGICKSGDTSLALDL 192
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+++M ++ DV +Y+ I+ CR+ KEM+ KG K S++TY ++ L K
Sbjct: 193 LRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCK 252
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
A + N+ +++ + M S +P+ ++ LI + K G++++ANE++++M +G+ PN +T
Sbjct: 253 AGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTIT 312
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YN+++ C ++ A +L M + C PD T+ L+K C+ KR+ L +
Sbjct: 313 YNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKIS 372
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
K + + TY+ LV+G +SGKLE+A F+EM+S G++P TY +L + L
Sbjct: 373 KRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGL 425
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 188/395 (47%), Gaps = 39/395 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN++V+ + KS L +L+++MDE N + T STI+ L R G D A+ F+ M
Sbjct: 173 YNSIVNGICKSGDTSLALDLLRKMDE-RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 231
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ G++ + L+ L K ++ + + IP + FN+LI + K K
Sbjct: 232 ETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIP-NVITFNVLIDVFVKEGK 290
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A + KEM +G SP+ ++Y ++ YC + + ++ L M C P ++T+T
Sbjct: 291 LQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTS 350
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ K K+++E +K++ K+ + +T YS L+ ++G+++ A E+F++M G
Sbjct: 351 LIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLG 410
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKME---------------EDLC--------- 437
V+P+V+TY ++ C + E AL++ + ++ E +C
Sbjct: 411 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAW 470
Query: 438 -----------KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
KP+ TY ++ C+K + N LL M ++ + TY +L+R
Sbjct: 471 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAH 530
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ G L + EEM S G S+ KM+ + L
Sbjct: 531 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 187/382 (48%), Gaps = 3/382 (0%)
Query: 145 FGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
F + K + GY +NT+++ L K LV M E N ++ T ++I
Sbjct: 118 FAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVE-NGCQPNVVTYNSI 176
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CI 262
+ + + G A++ R M + V+ D S ++D+L + ++ A +F E + I
Sbjct: 177 VNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 236
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
S +N L+ G CK K +D + +K+M + P+V+++ I+ + +E ++ ++
Sbjct: 237 KSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANE 296
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
KEM KG P+ ITY +M +++EA + + M ++C PD ++SLI
Sbjct: 297 LYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYC 356
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K RV + ++F + K+G+V N +TY+ ++ C + E A +L Q+M PD
Sbjct: 357 KVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVM 416
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY LL C +++ + + K+ +++D Y ++ G+ + GK+E A + F +
Sbjct: 417 TYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSL 476
Query: 503 ISKGIVPYHSTYKMLEEKLEKK 524
KG+ P TY ++ L KK
Sbjct: 477 PCKGVKPNVMTYTVMISGLCKK 498
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 1/267 (0%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA +EM + P +V ++ F K F V D K+M+ G ++ T
Sbjct: 45 KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLN 104
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + + A V K+ PDT+ +++LI L +V +A + M +
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G PNV+TYN++++ C + AL LL+KM+E K D TY+ ++ CR +
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L M + TY SLV GL ++GK ++M S+ I+P T+ +L +
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284
Query: 521 LEKK-RLGNAKERINKLLAHAKEQKTF 546
K+ +L A E +++ T
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTI 311
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 1/188 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T S +++ + G+ + A E F+ M GV D +L+D L +E A ++F +
Sbjct: 381 VTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFED 440
Query: 258 F-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K + L ++ I+I G CK KV+DA + +G P+V++YT I C++
Sbjct: 441 LQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGS 500
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + L++M+E G +P+ TY ++ A + + + K+ E+MKS D S
Sbjct: 501 LSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKM 560
Query: 377 LIFILSKA 384
+I +LS A
Sbjct: 561 VIDMLSSA 568
>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
Length = 664
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 114/397 (28%), Positives = 194/397 (48%), Gaps = 16/397 (4%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWEL 183
S+S + Q LR F AF FF WA ++ G+ H Y M+D+LG++ +
Sbjct: 24 SISKTTFFQVLR-FIASPPKAFEFFNWA-SRNGFAHDSRSYFMMLDILGRNGNLNIARNF 81
Query: 184 VKEMDELNNGYVSLATM--STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
+ ++ +NG V + +T++R G +++A++ F MK GV + L+
Sbjct: 82 LFSIERRSNGSVKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLI 141
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLS--SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L+K A+ VF E ++ + FNILI G+CK VD+ + KEM + P
Sbjct: 142 LLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEP 201
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEM--QEKGCKPSVITYTIVMHALGKAKQINEALK 357
DVV+Y ++ CR R + +K M + K P V+TYT ++ ++I+EAL
Sbjct: 202 DVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALV 261
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED-MKKQGVVPNVLTYNTMISSA 416
V+E+M S P+ Y++LI L + + EI + +G VP+ TYNT++++
Sbjct: 262 VFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQ 321
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM-D 475
C + ALK+ +KM+E +PD TY+ L++ C++ + L + D+ + D
Sbjct: 322 CDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRD 381
Query: 476 AG------TYASLVRGLIESGKLELACSFFEEMISKG 506
G Y + L ++GK A F +++ KG
Sbjct: 382 DGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKG 418
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 115/234 (49%), Gaps = 6/234 (2%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT---YTIVMHALGKAK 350
+ GF+ D SY ++ R + + L ++ + I ++ + G A
Sbjct: 52 RNGFAHDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIEDRFCNTLLRSYGNAG 111
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM-KKQGVVPNVLTY 409
NEA+K++ MKS P ++SL+ IL K GR A+ +F++M GV P+ T+
Sbjct: 112 LFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTF 171
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N +I C S + + ++M C+PD TY L+ CR ++++ + ++ M K
Sbjct: 172 NILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVK 231
Query: 470 N--DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
D+S D TY +LVRG +++ A FEEM+S+G+ P TY L + L
Sbjct: 232 KMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGL 285
>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 632
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 119/456 (26%), Positives = 211/456 (46%), Gaps = 25/456 (5%)
Query: 52 IKFFDSQSP-DEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQS 110
++ F + SP +ED V L+ + S RVL E + +IL
Sbjct: 32 VQMFRTPSPRNEDAVAA----------LSPRYTNSVRVLDE-------RFIRILKIFKWG 74
Query: 111 PDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
PD AL+ + V + LV + ++ + FF WA + Y H Y ++
Sbjct: 75 PD-AERALEVLMLRVDHWLVREVMKT-DVGVNVKMQFFRWAAKKRNYQHDTSTYMALIHC 132
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
L +++ MW++++EM V+ +S ++R L A+ F +K +
Sbjct: 133 LELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMIGKAITIFYQIKARKCQP 192
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKD---CIPLSSQIFNILIHGWCKTRKVDDAQK 287
+A + ++ L+ E ++++ E + C P + ++ LI +CK + D A +
Sbjct: 193 TAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHP-DTVTYSALISAFCKLGRQDSAIR 251
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+ EM + G P YT I + + + +EM+ C+P V TYT ++ LG
Sbjct: 252 LLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLG 311
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
KA +I+EA Y +M+ +DC PDT +++I L KAGR+ D ++FE+M +PNV+
Sbjct: 312 KAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVV 371
Query: 408 TYNTMISSAC-ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
TYNT+I + ++S ++M+ P TY+ L+ C+ R++ LL
Sbjct: 372 TYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEE 431
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
M + Y SL+ L ++ + +LAC F+E+
Sbjct: 432 MDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 467
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 4/328 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++R L + GR D+A + M++ + DT ++ +++ L K ++ K+F E
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEM 361
Query: 259 --KDCIPLSSQIFNILIHGWCKTR-KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
CIP + +N +I +++ +V + + M G SP +Y+ I+ +C+
Sbjct: 362 GVSHCIP-NVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTN 420
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
K L+EM EKG P Y ++ ALGKAK+ + A ++++++K + Y+
Sbjct: 421 RIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 480
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I L KAGR+ DA +F++M K G PNV YN ++S + AL ++KM+E
Sbjct: 481 VMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEH 540
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C PD +Y +L + +LT+M + + DA +Y +++ L +G E A
Sbjct: 541 GCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEA 600
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+EM + G TY + E + K
Sbjct: 601 AELMKEMNALGFEYDLITYSSILEAIGK 628
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 7/240 (2%)
Query: 116 EALKGCGVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGK 173
E +KG G+S S + F +N + A + G+ P Y +++D LGK
Sbjct: 395 ERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLE-EMDEKGFPPCPAAYCSLIDALGK 453
Query: 174 SKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR 233
+K++ L EL +E+ E N G S + +++ L + GR DDA+ F M K G +
Sbjct: 454 AKRYDLACELFQELKE-NCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVY 512
Query: 234 ALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKE 291
A + LM L + ++ A + ++ C+P +NI+++G KT A + +
Sbjct: 513 AYNALMSGLARACMLDEALTTMRKMQEHGCLP-DINSYNIILNGLAKTGGPHRAMEMLTN 571
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M PD VSY + F + + +KEM G + +ITY+ ++ A+GK Q
Sbjct: 572 MKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 6/214 (2%)
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD-CLPDTSFYSSLIFILSKA 384
+++ + C+P+ Y ++ L Q + ++Y +M ++ C PDT YS+LI K
Sbjct: 184 QIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKL 243
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
GR A + +MK+ G+ P Y +IS AL L ++M C+PD TY
Sbjct: 244 GRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTY 303
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L++ + R+ M + D D +++ L ++G+L+ FEEM
Sbjct: 304 TELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGV 363
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
+P TY + K L +K R++++ +
Sbjct: 364 SHCIPNVVTYNTI-----IKALFESKSRVSEVFS 392
>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 604
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/422 (26%), Positives = 202/422 (47%), Gaps = 14/422 (3%)
Query: 85 SSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPA 144
S RVL E + +IL PD +AL+ + V + LV + ++ +
Sbjct: 23 SVRVLDE-------RFIRILKIFKWGPD-AEKALEVLMLRVDHWLVREVMKT-DVGVNVK 73
Query: 145 FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM 204
FF WA + Y H Y ++ L +++ MW++++EM V+ +S ++
Sbjct: 74 MQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVV 133
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK---DC 261
R L A+ F +K + +A + ++ L+ E ++++ E C
Sbjct: 134 RMLGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHC 193
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
P + ++ LI +CK + D A + + EM + G P YT I + + D
Sbjct: 194 FP-DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGAL 252
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+EM+ + C+P V TYT ++ LGKA +I+EA + +M+ + C PDT F +++I L
Sbjct: 253 SLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFL 312
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC-ARSEEENALKLLQKMEEDLCKPD 440
KAGR+ DA ++F++M+ +P+V+TYNT+I + ++S ++M+E P
Sbjct: 313 GKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPS 372
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY+ L+ C+ RM+ LL M + Y SL+ L ++ + +LAC F+
Sbjct: 373 SFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQ 432
Query: 501 EM 502
E+
Sbjct: 433 EL 434
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 164/328 (50%), Gaps = 4/328 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++R L + GR D+A F M++ G DT ++ +++ L K ++ A K+F E
Sbjct: 269 TYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEM 328
Query: 259 KD--CIPLSSQIFNILIHGWCKTR-KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ CIP S +N +I +++ + + + M + G SP +Y+ I+ +C+
Sbjct: 329 ETLRCIP-SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTN 387
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
K L+EM EKG P Y ++ ALGKAK+ + A ++++++K + Y+
Sbjct: 388 RMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 447
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I L KAGR+ DA +F++M K G P+V YN ++S + AL +++M+E
Sbjct: 448 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH 507
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C PD +Y +L + +L++M ++ V D +Y +++ L +G E A
Sbjct: 508 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEA 567
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+EM + G TY + E + K
Sbjct: 568 SKLMKEMNTLGFEYDLITYSSILEAIGK 595
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/387 (25%), Positives = 178/387 (45%), Gaps = 13/387 (3%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
+ YN+M+ +L ++ + +L EM + + T S ++ + GR D A++
Sbjct: 162 QAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLN 221
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKT 279
MK+ G++ T+ ++L+ K N A +F E + C P + LI G K
Sbjct: 222 EMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRP-DVFTYTELIRGLGKA 280
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKPSV 336
++D+A EM ++G PD V I + ++DD +K EM+ C PSV
Sbjct: 281 GRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAG---RLDDAMKLFQEMETLRCIPSV 337
Query: 337 ITYTIVMHALGKAK-QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+TY ++ AL ++K + +E +E+MK P + YS LI K R++ A + E
Sbjct: 338 VTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLE 397
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M ++G P Y ++I + + A +L Q+++E+ YA ++K +
Sbjct: 398 EMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAG 457
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
R+ + M K + D Y +L+ GL +G L+ A S M G +P ++Y
Sbjct: 458 RLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYN 517
Query: 516 MLEEKLEKKRLGNAKERINKLLAHAKE 542
++ L K R ++L++ K+
Sbjct: 518 IILNGLAKT---GGPHRAMEMLSNMKQ 541
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 38/234 (16%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ P Y +++D LGK+K++ L EL +E+ E N G S + +++ L + GR
Sbjct: 401 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE-NCGSSSARVYAVMIKHLGKAGRL 459
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
DDA+ F M K G D A +N L+
Sbjct: 460 DDAINMFDEMNKLGCAPDVYA----------------------------------YNALM 485
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G +T +D+A M+ M + G PD+ SY + + + + L M++ +
Sbjct: 486 SGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVR 545
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
P V++Y V+ AL A EA K+ ++M + D YSS IL G+V
Sbjct: 546 PDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSS---ILEAIGKV 596
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD-CLPDTSF 373
K R+ +++ + C+P Y ++ L Q + ++Y +M ++ C PDT
Sbjct: 140 KMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVT 199
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
YS+LI K GR A ++ +MK+ G+ P Y +I+ ++ AL L ++M
Sbjct: 200 YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMR 259
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
C+PD TY L++ + R+ M + D +++ L ++G+L+
Sbjct: 260 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLD 319
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKL 521
A F+EM + +P TY + + L
Sbjct: 320 DAMKLFQEMETLRCIPSVVTYNTIIKAL 347
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 162 bits (410), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 178/366 (48%), Gaps = 11/366 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFR 221
YN M+ +C E+ + L+ VS + T +TI+R L G+ A+E
Sbjct: 175 YNVMI------SGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKT 279
M + D ++L++ + + V HA K+ E +D C P +N+L++G CK
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP-DVVTYNVLVNGICKE 287
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++D+A K + +M G P+V+++ + C + + L +M KG PSV+T+
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
I+++ L + + A+ + EKM C P++ Y+ L+ K ++ A E E M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G P+++TYNTM+++ C + E+A+++L ++ C P TY ++ + +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
LL M D+ D TY+SLV GL GK++ A FF E GI P T+ +
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIML 527
Query: 520 KLEKKR 525
L K R
Sbjct: 528 GLCKSR 533
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 163/325 (50%), Gaps = 6/325 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+T++R R G+ A + ++ G D +V++ K + +A V D
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVL----D 196
Query: 261 CIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
+ +S + +N ++ C + K+ A + + M Q+ PDV++YT IE CR+
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
L EM+++GC P V+TY ++++ + K +++EA+K M S C P+ ++ ++
Sbjct: 257 HAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ GR DA ++ DM ++G P+V+T+N +I+ C + A+ +L+KM + C+
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P+ +Y PLL C++K+M L M D TY +++ L + GK+E A
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEK 523
++ SKG P TY + + L K
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAK 461
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 160/296 (54%), Gaps = 10/296 (3%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDD 215
TP++ YN +V+ + K + + E +K ++++ + ++ T + I+R + GR+ D
Sbjct: 271 TPDVVTYNVLVNGICKEGR---LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILI 273
A + M + G ++L++ L + + A + + C P +S +N L+
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQP-NSLSYNPLL 386
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
HG+CK +K+D A + ++ M +G PD+V+Y + C++ + L ++ KGC
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P +ITY V+ L KA + +A+K+ ++M++ D PDT YSSL+ LS+ G+V +A +
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
F + ++ G+ PN +T+N+++ C + + A+ L M CKP+ +Y L++
Sbjct: 507 FHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 168/378 (44%), Gaps = 11/378 (2%)
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA---VEAFRGM 223
MV + FCL+ + +E N VS T +I ++ G R + V A +
Sbjct: 4 MVSTSSAQEGFCLIQQFHREYKRGNKLDVSCRTSGSISSKIPLGSRKRNRLVLVSAASKV 63
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
+ G+ + L N H V F L N + +T +++
Sbjct: 64 ESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSF----ALEDVESNNHLRQMVRTGELE 119
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+ K ++ M G PD++ T I +CR RK L+ ++ G P VITY +++
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMI 179
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
KA +IN AL V ++M PD Y++++ L +G++K A E+ + M ++
Sbjct: 180 SGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P+V+TY +I + C S +A+KLL +M + C PD TY L+ C++ R+
Sbjct: 237 PDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-E 522
L M + + T+ ++R + +G+ A +M+ KG P T+ +L L
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 523 KKRLGNAKERINKLLAHA 540
K LG A + + K+ H
Sbjct: 357 KGLLGRAIDILEKMPQHG 374
>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
Length = 1627
Score = 162 bits (409), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 178/360 (49%), Gaps = 5/360 (1%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF WA + Y H Y ++ L +++ MW++++EM V+ +S ++R
Sbjct: 1099 FFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSDVVRM 1158
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---CIP 263
L A+ F +K + +A + ++ L+ E ++++ E C P
Sbjct: 1159 LGNAKMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFP 1218
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ ++ LI +CK + D A + + EM + G P YT I + + D
Sbjct: 1219 -DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSL 1277
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+EM+ + C+P V TYT ++ LGKA +I+EA + +M+ + C PDT F +++I L K
Sbjct: 1278 FEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGK 1337
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC-ARSEEENALKLLQKMEEDLCKPDCE 442
AGR+ DA ++F++M+ +P+V+TYNT+I + ++S ++M+E P
Sbjct: 1338 AGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSF 1397
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY+ L+ C+ RM+ LL M + Y SL+ L ++ + +LAC F+E+
Sbjct: 1398 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 1457
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 164/328 (50%), Gaps = 4/328 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++R L + GR D+A F M++ G DT ++ +++ L K ++ A K+F E
Sbjct: 1292 TYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEM 1351
Query: 259 KD--CIPLSSQIFNILIHGWCKTR-KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ CIP S +N +I +++ + + + M + G SP +Y+ I+ +C+
Sbjct: 1352 ETLRCIP-SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTN 1410
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
K L+EM EKG P Y ++ ALGKAK+ + A ++++++K + Y+
Sbjct: 1411 RMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 1470
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I L KAGR+ DA +F++M K G P+V YN ++S + AL +++M+E
Sbjct: 1471 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH 1530
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C PD +Y +L + +L++M ++ V D +Y +++ L +G E A
Sbjct: 1531 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEA 1590
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+EM + G TY + E + K
Sbjct: 1591 SKLMKEMNTLGFEYDLITYSSILEAIGK 1618
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/389 (25%), Positives = 179/389 (46%), Gaps = 17/389 (4%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
+ YN+M+ +L ++ + +L EM + + T S ++ + GR D A++
Sbjct: 1185 QAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLN 1244
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNI--LIHGWC 277
MK+ G++ T+ ++L+ K N A +F E + C P +F LI G
Sbjct: 1245 EMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRP---DVFTYTELIRGLG 1301
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKP 334
K ++D+A EM ++G PD V I + ++DD +K EM+ C P
Sbjct: 1302 KAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAG---RLDDAMKLFQEMETLRCIP 1358
Query: 335 SVITYTIVMHALGKAK-QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
SV+TY ++ AL ++K + +E +E+MK P + YS LI K R++ A +
Sbjct: 1359 SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMML 1418
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
E+M ++G P Y ++I + + A +L Q+++E+ YA ++K +
Sbjct: 1419 LEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGK 1478
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
R+ + M K + D Y +L+ GL +G L+ A S M G +P ++
Sbjct: 1479 AGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINS 1538
Query: 514 YKMLEEKLEKKRLGNAKERINKLLAHAKE 542
Y ++ L K R ++L++ K+
Sbjct: 1539 YNIILNGLAKT---GGPHRAMEMLSNMKQ 1564
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ P Y +++D LGK+K++ L EL +E+ E N G S + +++ L + GR
Sbjct: 1424 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE-NCGSSSARVYAVMIKHLGKAGRL 1482
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
DDA+ F M K G D A +N L+
Sbjct: 1483 DDAINMFDEMNKLGCAPDVYA----------------------------------YNALM 1508
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G +T +D+A M+ M + G PD+ SY + + + + L M++ +
Sbjct: 1509 SGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVR 1568
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
P V++Y V+ AL A EA K+ ++M + D YSS++ + K
Sbjct: 1569 PDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 1618
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 95/208 (45%), Gaps = 1/208 (0%)
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD-CLPDTSF 373
K R+ +++ + C+P Y ++ L Q + ++Y +M ++ C PDT
Sbjct: 1163 KMVRQAITIFYQIKTRKCQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVT 1222
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
YS+LI K GR A ++ +MK+ G+ P Y +I+ ++ AL L ++M
Sbjct: 1223 YSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMR 1282
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
C+PD TY L++ + R+ M + D +++ L ++G+L+
Sbjct: 1283 HQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLD 1342
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKL 521
A F+EM + +P TY + + L
Sbjct: 1343 DAMKLFQEMETLRCIPSVVTYNTIIKAL 1370
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 186/373 (49%), Gaps = 2/373 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N M++VL K K + V M E + ++ T +TI+ GR + A M
Sbjct: 224 FNIMINVLCKEGKLKKAKDFVGHM-ETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
K+ +E D+ L+ + K +E A K+F E + + S+ I+N LI G+C +
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D A EM ++G SP + +Y I E+ + + +KE+QEKG P ITY I+
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ + +A ++++M + P Y+SL+ +LSK R+K+A+++F+ + +GV
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+P+ + +N +I C+ S + A +LL+ M+ PD T+ +++ CR+ +++
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L M + + D ++ +L+ G G ++ A EM+ G P TY L + L
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582
Query: 523 KKRLGNAKERINK 535
K + G+ E + K
Sbjct: 583 KNQEGDLAEELLK 595
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 149/318 (46%), Gaps = 1/318 (0%)
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
G+ S +++ R D+A E F MK+ GV + L+ +K N E A+
Sbjct: 147 GFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAW 206
Query: 253 KVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
++ E F+ I S FNI+I+ CK K+ A+ + M G P++V+Y + Y
Sbjct: 207 VLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGY 266
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C D L M+ + +P TY ++ + K ++ EA K++E+M P
Sbjct: 267 CSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSA 326
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y++LI G + A+ ++M K+G+ P + TYN++I + + A ++++
Sbjct: 327 VIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKE 386
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
++E PD TY L+ CR K L M + + TY SL+ L + +
Sbjct: 387 IQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNR 446
Query: 492 LELACSFFEEMISKGIVP 509
++ A F+++ S+G++P
Sbjct: 447 MKEADDLFKKITSEGVLP 464
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 159/346 (45%), Gaps = 11/346 (3%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRAL--SVLMDTLVKG----NSVEHAYKVFL 256
++R+ + GG + E F + +D S++ D L+K N + A++ F
Sbjct: 119 LLRQALGGGTTNSIREIFEFL---AASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFY 175
Query: 257 EFKDCIPLSS-QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
K+ L + + N L+ + K + + A EMF+ V ++ I C+E
Sbjct: 176 TMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEG 235
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+K D + M+ G KP+++TY ++H + ++ A + MK PD+ Y
Sbjct: 236 KLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYG 295
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
SLI + K GR+++A++IFE+M ++G+ P+ + YNT+I C + + A +M +
Sbjct: 296 SLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKK 355
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
P TY L+ ++R ++ + + +S DA TY L+ G + A
Sbjct: 356 GISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKA 415
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHA 540
+EM++ GI P TY L L KK R+ A + K+ +
Sbjct: 416 FLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEG 461
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 183/367 (49%), Gaps = 4/367 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ G+ Y +++ L KS L +L ++M+E N S+ S ++ L + G
Sbjct: 231 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE-RNIKASVVQYSIVIDSLCKDGS 289
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFN 270
+DDA+ F M+ G++ D S L+ L + K+ E ++ IP F+
Sbjct: 290 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP-DVVTFS 348
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI + K K+ +A++ EM +G +PD ++Y I+ +C+E + + M K
Sbjct: 349 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 408
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
GC+P ++TY+I++++ KAK++++ ++++ ++ S +P+T Y++L+ ++G++ A
Sbjct: 409 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 468
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+F++M +GV P+V+TY ++ C E AL++ +KM++ Y ++
Sbjct: 469 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 528
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C ++ L + V D TY ++ GL + G L A F +M G P
Sbjct: 529 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 588
Query: 511 HSTYKML 517
TY +L
Sbjct: 589 DFTYNIL 595
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 159/328 (48%), Gaps = 1/328 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T ++ RL + G A++ FR M++ ++ S+++D+L K S + A +F E
Sbjct: 240 VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 299
Query: 258 FK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ I ++ LI G C K DD K ++EM + PDVV+++ I+ + +E
Sbjct: 300 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 359
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + EM +G P ITY ++ K ++EA ++++ M S C PD YS
Sbjct: 360 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 419
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI KA RV D +F ++ +G++PN +TYNT++ C + A +L Q+M
Sbjct: 420 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 479
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
P TY LL C + + M K+ +++ G Y ++ G+ + K++ A
Sbjct: 480 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 539
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKK 524
S F + KG+ P TY ++ L KK
Sbjct: 540 SLFCSLSDKGVKPDVVTYNVMIGGLCKK 567
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 171/367 (46%), Gaps = 8/367 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++D L K F L EM E+ + T S+++ L G++DD + R M
Sbjct: 277 YSIVIDSLCKDGSFDDALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 335
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
+ D S L+D VK + A +++ E I + +N LI G+CK +
Sbjct: 336 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 395
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSVITY 339
+A + M +G PD+V+Y+ I YC+ K +VDD + +E+ KG P+ ITY
Sbjct: 396 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAK---RVDDGMRLFREISSKGLIPNTITY 452
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ ++ ++N A +++++M S P Y L+ L G + A EIFE M+K
Sbjct: 453 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 512
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+ + YN +I C S+ ++A L + + KPD TY ++ C+K +
Sbjct: 513 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 572
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ L M ++ + D TY L+R + L + EEM G ST KM+ +
Sbjct: 573 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 632
Query: 520 KLEKKRL 526
L +RL
Sbjct: 633 MLSDRRL 639
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 179/394 (45%), Gaps = 13/394 (3%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q+ + TP +N + + ++K++ L+ K M ELN + TM+ ++ R +
Sbjct: 92 QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGM-ELNGIEHDMYTMTIMINCYCRKKKL 150
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV---FLEFK---DCIPLSSQ 267
A K G E DT S L++ V A + +E K D + +S+
Sbjct: 151 LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVST- 209
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
LI+G C +V +A + M + GF PD V+Y + C+ + D ++M
Sbjct: 210 ----LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 265
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+E+ K SV+ Y+IV+ +L K ++AL ++ +M+ D YSSLI L G+
Sbjct: 266 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 325
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
D ++ +M + ++P+V+T++ +I + A +L +M PD TY L
Sbjct: 326 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 385
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C++ + N + M D TY+ L+ ++ +++ F E+ SKG+
Sbjct: 386 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 445
Query: 508 VPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHA 540
+P TY L + +L AKE ++++
Sbjct: 446 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 479
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 123/302 (40%), Gaps = 36/302 (11%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
KV+DA + M Q P + + R K + V K M+ G + + T T
Sbjct: 79 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 138
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + K++ A V + PDT +S+L+ GRV +A + + M +
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK------ 454
P+++T +T+I+ C + AL L+ +M E +PD TY P+L C+
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258
Query: 455 ----KRMKVLNF-------------------------LLTHMFKNDVSMDAGTYASLVRG 485
++M+ N L M + D TY+SL+ G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAKEQK 544
L GK + EMI + I+P T+ L + K+ +L AKE N+++
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378
Query: 545 TF 546
T
Sbjct: 379 TI 380
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 120/457 (26%), Positives = 223/457 (48%), Gaps = 25/457 (5%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGC----GVSVSNSLVEQTLRRFSNDLTPAFGFFTW 150
+++++++I+ +Q + E ++ G + LV + + R D A+ F W
Sbjct: 33 AEIERLAEIILRQVVDSKRAGEGIEKSLGLYGDILVPDLVGKVIHRIP-DPNTAWEVFQW 91
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKK-------FCLMWELVKEMDELNNGYVSLATMSTI 203
A Q+ + H N ++ V K+++ F + V E DE+ + +T+
Sbjct: 92 AGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEV--------SYNTL 143
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
M + G A+ F MK G+ R+ ++++ L G + A++VF +
Sbjct: 144 MNGFFKAGDVKKALALFGEMKDSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKDMSGIFS 202
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ + I+I G CK+RKVD A K+M + PDVV+Y I+ +++ ++ D
Sbjct: 203 PNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDL 262
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL-PDTSFYSSLIFILS 382
+E + KGC P+V+TY ++ L K +I AL +Y+ M + L PD YS+LI L+
Sbjct: 263 FEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLN 322
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME-EDLCKPDC 441
+ R + A E++E+M G P+V+TYNT++ C E+ A+++ +KM ++C P+
Sbjct: 323 LSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNV 382
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ C+ R+ L M + DA T+ ++++ L + +++ A FE
Sbjct: 383 ITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFES 442
Query: 502 MISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKLL 537
I K P + ML + R+ +AK+ +++L
Sbjct: 443 -IGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRML 478
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 10/266 (3%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
A+ F A+ + G T YNTM+D L K + L +M + + T S +
Sbjct: 259 AYDLFEEARAK-GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSAL 317
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KD 260
+ L R + A E + M G D + L+D L K + A ++F +
Sbjct: 318 INGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNV 377
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
C P + + +LI +CK ++ DA K KEM + PD V++T I+ C+E ++
Sbjct: 378 CDP-NVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCKES---RI 433
Query: 321 DDT--LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
D+ L E K CKP + + ++ K +I++A K++++M C P + Y++L+
Sbjct: 434 DEAHELFESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLATYTALV 493
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVP 404
+ GR DA ++ +M + G P
Sbjct: 494 TGFCRTGRYSDALIMYHEMIEMGFPP 519
Score = 46.6 bits (109), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y ++D K + +L KEM E + T +T++++L + R D+A E F
Sbjct: 385 YTVLIDRFCKVDRLGDAVKLAKEM-EGRSLLPDAVTFTTVIQKLCKESRIDEAHELFES- 442
Query: 224 KKYGVEKDTRALSVLMDTLVKG----NSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWC 277
+ K + SVL +T++ G ++ A K+ D C P + + L+ G+C
Sbjct: 443 ----IGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAP-TLATYTALVTGFC 497
Query: 278 KTRKVDDAQKAMKEMFQQGFSPD 300
+T + DA EM + GF P+
Sbjct: 498 RTGRYSDALIMYHEMIEMGFPPE 520
>gi|302142966|emb|CBI20261.3| unnamed protein product [Vitis vinifera]
Length = 509
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 112/415 (26%), Positives = 193/415 (46%), Gaps = 46/415 (11%)
Query: 104 LSKQYQ--SPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAK---TQTGYM 158
L K Y+ S ++ AL C +S+++ LV L+R +D PA+ FF WA ++GY
Sbjct: 93 LLKTYRDSSVSEIEGALHQCRLSLTDDLVLDVLKRHRSDWRPAYVFFNWASRCGIESGYS 152
Query: 159 HTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
++N ++D+LG+ ++F M +L EM + G V+ T ++ R + ++A
Sbjct: 153 PGCGVHNEILDILGRMRRFHEMTQLFDEMSK-RKGLVNERTFGVLLNRYAAAHKTEEA-- 209
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCK 278
A K+F + K S N++++GWC
Sbjct: 210 --------------------------------AVKIFYKRKGAWIRS---MNVILNGWCV 234
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ +A++ ++ PD +Y FI + + M EKGC P V
Sbjct: 235 LGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAI 294
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
++ AL K+I EAL+V +M DC PD + Y+SLI L K R + E+ +DM+
Sbjct: 295 CNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDME 354
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++G +PN TY ++ S + E +L++ME + C+ + + Y +LK+
Sbjct: 355 QKGCLPNARTYGYLLKST---KKPEEVPGILERMERNGCRMNSDCYNLILKLYMDWGYEL 411
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
L L M +N + D TY ++ GL + G+++ A S+F++M G+VP T
Sbjct: 412 KLRSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQMTLMGMVPEPRT 466
>gi|125564557|gb|EAZ09937.1| hypothetical protein OsI_32236 [Oryza sativa Indica Group]
Length = 544
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 179/387 (46%), Gaps = 5/387 (1%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
L A FF P +Y M+D+L K F L L+ EM E + +S +
Sbjct: 125 LPEAVAFFHHVLPSLPPDSLPALYAAMIDLLAKHHHFPLARHLLDEMRE-RSVPISAQLI 183
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGV-EKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
++RR VR +A + FR M++YG D L+ L+ L K A +F +K
Sbjct: 184 LALIRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYK 243
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
++ L+H WC++ ++D+A++ EM Q G +P+V +YT I+ R +
Sbjct: 244 SVFTPDVVLYTTLVHAWCRSGRLDEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPR 303
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ L +M + GC P+ T+ +M A KA + + L+V+ +M+ C PD Y+ L+
Sbjct: 304 AQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLME 363
Query: 380 ILSKAGR--VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
G+ + A ++ M +G +P+ T+N M+ A KL ++M+E C
Sbjct: 364 THCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQC 423
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KP+ TY L+++ +K M ++ + M V + TYA+L+ G + A
Sbjct: 424 KPNVVTYNLLMRLFNLEKSMDMVLRIKRDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHM 483
Query: 498 FFEEMI-SKGIVPYHSTYKMLEEKLEK 523
EM+ K + P Y M+ L K
Sbjct: 484 TLREMVEEKALKPTKPVYDMVLALLRK 510
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 112/250 (44%), Gaps = 44/250 (17%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGR 212
Q G Y ++D + ++ + EL+ +M +++G + AT + IMR V+ GR
Sbjct: 278 QAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQM--IDSGCPPNTATFNAIMRAHVKAGR 335
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGNS-VEHAYKVFLEF--KDCIPLSSQI 268
+ ++ M++ G E D + LM+T KG S ++ A K+ K CIP
Sbjct: 336 SEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIP-DCHT 394
Query: 269 FN-----ILIHG---------------WCKTRKVD--------DAQKAM-------KEMF 293
FN +L+ G CK V + +K+M ++M
Sbjct: 395 FNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKRDMD 454
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQI 352
QG P+V +Y IE +C ++++ TL+EM +EK KP+ Y +V+ L KA Q+
Sbjct: 455 AQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRKAGQL 514
Query: 353 NEALKVYEKM 362
++ E M
Sbjct: 515 RRHEELVEMM 524
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 162/321 (50%), Gaps = 2/321 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++R L GR ++AV M+ G + + L+ + ++ A +V
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 213
Query: 259 KDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
++ + FN +++G CK +++ A+K EM ++G +PDVVSY + YC+
Sbjct: 214 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGC 273
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ EM ++G P V+T+T ++HA KA + +A+ + +M+ + +++
Sbjct: 274 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 333
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI K G + DA E+M+K G+ P+V+ YN +I+ C + A +L+++ME
Sbjct: 334 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 393
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
KPD TY+ ++ C+ + L M K V DA TY+SL+RGL E +L AC
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453
Query: 497 SFFEEMISKGIVPYHSTYKML 517
FE M+ G+ P TY L
Sbjct: 454 ELFENMLQLGVQPDEFTYTTL 474
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 169/327 (51%), Gaps = 2/327 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK-DTRALSVLMDTLVKGNSVEHAYKVFLE 257
T +T++ R G D A M++ G K + + +++ L K +E A KVF E
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248
Query: 258 F-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
++ + +N L+ G+CK + ++ EM Q+G PDVV++T I C+ +
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + +M+E+G + + +T+T ++ K +++AL E+M+ P Y++
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI K GR+ A E+ +M+ + V P+V+TY+T+IS C ++A +L QKM +
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY+ L++ C +KR+ L +M + V D TY +L+ G + G +E A
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK 523
S +EMI KG++P TY +L L K
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSK 515
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 182/461 (39%), Gaps = 87/461 (18%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+V ++ + +V M E N +L T ++++ L + GR + A + F M
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 249
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSSQI--------- 268
+ G+ D + + L+ K + + VF E D + +S I
Sbjct: 250 VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL 309
Query: 269 ---------------------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
F LI G+CK +DDA A++EM + G P VV Y
Sbjct: 310 EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNAL 369
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I YC+ + ++EM+ K KP V+TY+ ++ K ++ A ++ +KM
Sbjct: 370 INGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
LPD YSSLI L + R+ DA E+FE+M + GV P+ TY T+I C E AL
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 489
Query: 428 LLQKMEEDLCKPDCETYAPL----------------------------------LKMCCR 453
L +M PD TY+ L L +CC
Sbjct: 490 LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 549
Query: 454 KKRMKVLNFLL----------------THMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
K K + LL M + +D Y+ L+ G G + A S
Sbjct: 550 KAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALS 609
Query: 498 FFEEMISKGIVPYH-STYKMLEEKLEKKRLGNAKERINKLL 537
F ++M+ G P ST ++ E+ + A I LL
Sbjct: 610 FHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 177/394 (44%), Gaps = 56/394 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++ G K CL L + G V + T ++++ + G + AV
Sbjct: 261 YNTLLS--GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
M++ G+ + + L+D K ++ A E + C I S +N LI+G+CK +
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A++ ++EM + PDVV+Y+ I YC+ + ++M +KG P ITY+
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L + K++N+A +++E M PD Y++LI K G V+ A + ++M ++G
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V+P+V+TY+ +I+ + + A +LL K+ + PD Y L+ +CC K K +
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM-LCCSKAEFKSVV 557
Query: 462 FLLT---------------------------------------------------HMFKN 470
LL M ++
Sbjct: 558 ALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRS 617
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
S ++ + SLVRGL E G + A + +++++
Sbjct: 618 GFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLT 651
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 2/257 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
F+ LI + + A A+ G++P V +Y + + L M
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
G P+V TY I++ AL ++ EA+ V M+ C P+ Y++L+ +AG +
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 389 DANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A + M+++G PN++T+N+M++ C E A K+ +M + PD +Y L
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
L C+ + + + M + + D T+ SL+ ++G LE A + +M +G+
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324
Query: 508 VPYHSTYKMLEEKLEKK 524
T+ L + KK
Sbjct: 325 RMNEVTFTALIDGFCKK 341
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 79/203 (38%), Gaps = 16/203 (7%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ + G + A+ M + GV D SVL++ L K + A+++ +
Sbjct: 470 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 529
Query: 259 KDCIPLSSQI----------------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
P+ I L+ G+C + +A K + M + + D
Sbjct: 530 YHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGS 589
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
Y+ I +CR + RK K+M G P+ + ++ L + + EA + +
Sbjct: 590 VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649
Query: 363 KSDDCLPDTSFYSSLIFILSKAG 385
+ L D +LI + K G
Sbjct: 650 LTCCPLADAEASKALIDLNRKEG 672
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 167/327 (51%), Gaps = 5/327 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +TI++ + G D A+ FRG K +L+ L + ++ AY++ E
Sbjct: 61 THNTILKAYCQIGDLDRALSHFRG--KMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEM 118
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
KDC P + ++N LI G CK K+D A+ +K M ++ PDV++YT I C+
Sbjct: 119 IQKDCHP-DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNA 177
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ +++M+E G P + Y +++ L K Q+ E K+ E+M PDT Y++
Sbjct: 178 LDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNT 237
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
++ L ++G+ ++A +I E M ++ P+V+TYN+++ C S+ + A +LL+ M
Sbjct: 238 VVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRR 297
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C P TY L+ R R+ ++ MFK +S D TY L+ GL ++GKLE A
Sbjct: 298 CAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAH 357
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK 523
E M+ K P TY +L L K
Sbjct: 358 ELLEVMVEKDCAPDVVTYSILVNGLCK 384
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 165/319 (51%), Gaps = 9/319 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+ ++ L + + ++ + M + G E DT + + ++ L + E A K+ +
Sbjct: 201 NALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIE 260
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K C P +N L+ G+CK K+D+A++ +++M + +P V++YT I + R
Sbjct: 261 KKCGP-DVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+++M + G P ++TY ++ L KA ++ EA ++ E M DC PD YS L+
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L K G+V DA + E M ++G PN++T+NTMI C + + K+L+ M+E C
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCT 439
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PD TY+ L+ C+ RM+ +L +S D +Y+S++ GL +GK+E A
Sbjct: 440 PDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEV 493
Query: 499 FEEMISKGIVPYHSTYKML 517
+ M +G P S Y ++
Sbjct: 494 MDLMTKQGCPPTSSHYALI 512
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 172/355 (48%), Gaps = 2/355 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y ++ L + ++ ++L+ EM + + + A + ++ L + G+ D A + M
Sbjct: 95 YCILIHGLCQCQRIDEAYQLLDEMIQ-KDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMM 153
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKV 282
+ D + L+ + N+++ A K+ + K+ + + +N L++G CK ++
Sbjct: 154 LERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQL 213
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
++ K ++EM + G PD SY + C + + L++M EK C P V+TY +
Sbjct: 214 EEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSL 273
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
M K +++EA ++ E M C P Y++LI S+A R+ DA + EDM K G+
Sbjct: 274 MDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGI 333
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+++TYN ++ C + E A +LL+ M E C PD TY+ L+ C+ ++
Sbjct: 334 SPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARL 393
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + + T+ +++ G ++GK++ E M P TY L
Sbjct: 394 LLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTL 448
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 173/382 (45%), Gaps = 33/382 (8%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+++D K K L+++M ++ T +T++ R R DA M
Sbjct: 270 YNSLMDGFCKVSKMDEAERLLEDMVG-RRCAPTVITYTTLIGGFSRADRLADAYRVMEDM 328
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
K G+ D + L+D L K +E A+++ + KDC P ++IL++G CK K
Sbjct: 329 FKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAP-DVVTYSILVNGLCKLGK 387
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VDDA+ ++ M ++G P++V++ I+ +C+ + L+ M+E C P V+TY+
Sbjct: 388 VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYST 447
Query: 342 VMHALGKAKQ-----------------------------INEALKVYEKMKSDDCLPDTS 372
++ KA + + EA +V + M C P +S
Sbjct: 448 LIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSS 507
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+ +I L R +A ++ + M ++G PN+ TY+ +I+ C E+A+ +L M
Sbjct: 508 HYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVM 567
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
E C PD TY L+ C+ +M M + D Y L+ G +SG +
Sbjct: 568 LEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNV 627
Query: 493 ELACSFFEEMISKGIVPYHSTY 514
E A + M+ KG P +TY
Sbjct: 628 EKAIEVMQLMLEKGCNPDAATY 649
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 144/286 (50%), Gaps = 5/286 (1%)
Query: 250 HAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
Y F E F D S+ + LI G+ + + EM + FSPDV+++ +
Sbjct: 7 EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66
Query: 309 EHYCREKDFRKVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
+ YC+ D D L + K C P+ TY I++H L + ++I+EA ++ ++M DC
Sbjct: 67 KAYCQIGDL---DRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
PD + Y+ LI L K G++ A + + M ++ VP+V+TY ++I C + + A K
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARK 183
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L++KM+E PD Y LL C++ +++ ++ LL M + D +Y ++V L
Sbjct: 184 LMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLC 243
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
ESGK E A E+MI K P TY L + K + ER+
Sbjct: 244 ESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERL 289
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 141/282 (50%), Gaps = 15/282 (5%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
LGK L+ E++ E N L T +T++ + G+ D+ + MK+
Sbjct: 385 LGKVDDARLLLEMMLERGCQPN----LVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTP 440
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
D S L+D K N ++ A+ + D SS ++ G C T KV++AQ+ M
Sbjct: 441 DVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSS-----MLEGLCSTGKVEEAQEVMD 495
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ---EKGCKPSVITYTIVMHALG 347
M +QG P Y I C D + D+ LK +Q E+GC+P++ TY+I+++ L
Sbjct: 496 LMTKQGCPPTSSHYALIIGGLC---DVERGDEALKMLQVMSERGCEPNLYTYSILINGLC 552
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
K K++ +A+ V + M C+PD + Y+SLI K ++ A + F+ M+ G P+ L
Sbjct: 553 KTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKL 612
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
YN +IS C E A++++Q M E C PD TY L++
Sbjct: 613 AYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMR 654
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 209/471 (44%), Gaps = 51/471 (10%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKIL-----SKQYQSPDK 113
+PD L G + ++L E S++ ++ E D + ++ S +Y+ K
Sbjct: 194 TPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGK 253
Query: 114 VVEAL--KGCG--VSVSNSLVEQTLR--------RFSNDL------------TPAFGFFT 149
++E + K CG V NSL++ + R D+ T G F+
Sbjct: 254 ILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFS 313
Query: 150 WA-KTQTGYMHTPEM-----------YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
A + Y +M YN ++D L K+ K EL++ M E + +
Sbjct: 314 RADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVE-KDCAPDV 372
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T S ++ L + G+ DDA M + G + + + ++D K V+ +KV
Sbjct: 373 VTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLEL 432
Query: 258 FKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
K+ C P ++ LI G+CK ++ DA + G SPD SY+ +E C
Sbjct: 433 MKEVSCTP-DVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTG 485
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ + + M ++GC P+ Y +++ L ++ +EALK+ + M C P+ YS
Sbjct: 486 KVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYS 545
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
LI L K RV+DA + + M ++G VP+V TY ++I C ++ + A + + M +
Sbjct: 546 ILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDS 605
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
C+PD Y L+ C+ ++ ++ M + + DA TY SL+R L
Sbjct: 606 GCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656
>gi|326524037|dbj|BAJ97029.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 599
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 102/430 (23%), Positives = 194/430 (45%), Gaps = 16/430 (3%)
Query: 102 KILSKQYQSPDKVVEALKGCGV-SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHT 160
++L + P ++ AL G+ S L++ LRR + A G+F W
Sbjct: 34 RLLRRHGADPQRLASALSASGLDPASPRLLDAVLRRCGAASSLALGYFHWCSPSLPSAPL 93
Query: 161 PEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
P + ++ + L + +S + +S ++RRL A+
Sbjct: 94 PSSLALLAKCFSRASAA----PCPSLLAPLPSHLLSASILSPVLRRLPPPRVLPFALSLL 149
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTR 280
+ L+++L K V A ++ E + +PLS + + L++GWC+
Sbjct: 150 SSRPAH---DHPSLFLSLLESLSKTGHVAAAERLVEELQPRLPLSLRHYTALLYGWCRLA 206
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+D+A+ + M G +PDVV + + + + F + +EM+ + C P+ ++YT
Sbjct: 207 KLDEAKHVLARMKAAGVAPDVVVFNTLLAGFVADGRFEDAFELAREMERRDCPPNAVSYT 266
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+M LG +++E ++V+ +M+ C PD+ Y +L+ KAGR+ E + M +
Sbjct: 267 TLMQGLGSKGRVDEVMRVFVEMRRKGCTPDSVTYGTLVTAFCKAGRLSQGYEFLDSMSRD 326
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ + Y + + E L+L+++M E C PD Y ++++ C+ K
Sbjct: 327 GLRVDPGVYLGFFVAHEKEQQLEECLELMERMRECRCPPDLNIYNVVIRLSCKLGETKQA 386
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG--IVPYHSTYKML- 517
L + +S T+A +V GL+ G L AC++F++M+ +G + P + K L
Sbjct: 387 IALWNETENSGLSPGVDTFAIMVNGLVGQGSLVDACNYFKDMVGRGLFVAPQYGVLKDLL 446
Query: 518 -----EEKLE 522
+EKLE
Sbjct: 447 NALVRDEKLE 456
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 115/292 (39%), Gaps = 40/292 (13%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ +T++ V GR++DA E R M++ + + + LM L V+ +VF+
Sbjct: 227 VVVFNTLLAGFVADGRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSKGRVDEVMRVFV 286
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E K C P S + L+ +CK ++ + + M + G D Y F + +E
Sbjct: 287 EMRRKGCTP-DSVTYGTLVTAFCKAGRLSQGYEFLDSMSRDGLRVDPGVYLGFFVAHEKE 345
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + + ++ M+E C P + Y +V+ K + +A+ ++ + ++ P +
Sbjct: 346 QQLEECLELMERMRECRCPPDLNIYNVVIRLSCKLGETKQAIALWNETENSGLSPGVDTF 405
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQG--VVP---------------------------- 404
+ ++ L G + DA F+DM +G V P
Sbjct: 406 AIMVNGLVGQGSLVDACNYFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLELAKDVWGCI 465
Query: 405 -------NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
NV + I + A+ + A M E P +T+A L+K
Sbjct: 466 ASRGCELNVSAWTIWIHALYAKKHVKEACSYCLDMLEAGLMPQPDTFAKLMK 517
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 161 bits (408), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 179/363 (49%), Gaps = 6/363 (1%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
H P++ Y+T+++ L K + +L+K+M+E ++ +TI+ L + +A
Sbjct: 41 HEPDVITYSTIINGLCKMGNTTMALQLLKKMEE-KGCKPNVVAYNTIIDSLCKDRLVTEA 99
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIH 274
++ F M K G+ D S ++ V A +F + ++ IP + F ILI
Sbjct: 100 MDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIP-NKVTFTILID 158
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G CK R + +A + M ++G PDV +Y ++ YC + M KGC P
Sbjct: 159 GLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAP 218
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V +Y I+++ K+ +I+EA + +M PD YS+L+ + GR ++A E+
Sbjct: 219 NVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELL 278
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M G++PN++TY+ ++ C + A +LL+ M+E +P+ Y L++ C
Sbjct: 279 KEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTF 338
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+++ L +++F + TY ++ GL++ G AC F EM G +P TY
Sbjct: 339 GKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTY 398
Query: 515 KML 517
++
Sbjct: 399 NVI 401
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 181/374 (48%), Gaps = 2/374 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G T +NT++ L K +L EM ++ + + T STI+ L + G
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGH-EPDVITYSTIINGLCKMGNTTM 63
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIH 274
A++ + M++ G + + A + ++D+L K V A F E K+ IP ++ ++H
Sbjct: 64 ALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILH 123
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C +V++A K+M ++ P+ V++T I+ C+++ + + M EKG +P
Sbjct: 124 GFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEP 183
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
V TY ++ Q++EA K++ M C P+ Y+ LI K+GR+ +A +
Sbjct: 184 DVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLL 243
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+M + + P++ TY+T++ C + A +LL++M P+ TY+ +L C+
Sbjct: 244 AEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKH 303
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ LL M ++ + + Y L+ G+ GKLE A F + KGI P TY
Sbjct: 304 GHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTY 363
Query: 515 KMLEEKLEKKRLGN 528
++ L K L N
Sbjct: 364 TVMISGLLKGGLSN 377
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 156/307 (50%), Gaps = 11/307 (3%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF------KDCIPLSSQIFNILIHGW 276
M K G++ + L+ L + A K+F E D I S+ +I+G
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYST-----IINGL 55
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK A + +K+M ++G P+VV+Y I+ C+++ + D EM ++G P V
Sbjct: 56 CKMGNTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDV 115
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TY+ ++H ++NEA ++++M + +P+ ++ LI L K + +A +FE
Sbjct: 116 FTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFET 175
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M ++G+ P+V TYN ++ C+RS+ + A KL M+ C P+ +Y L+ C+ R
Sbjct: 176 MTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGR 235
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ LL M ++ D TY++L+RG + G+ + A +EM S G++P TY +
Sbjct: 236 IDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSI 295
Query: 517 LEEKLEK 523
+ + L K
Sbjct: 296 VLDGLCK 302
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 162/339 (47%), Gaps = 39/339 (11%)
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
L K+M E N + T + ++ L + +A F M + G+E D + L+D
Sbjct: 137 LFKQMVE-RNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGY 195
Query: 243 VKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
+ ++ A K+F ++ K C P + + +NILI+G CK+ ++D+A+ + EM + +PD
Sbjct: 196 CSRSQMDEAQKLFNIMDRKGCAP-NVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPD 254
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+ +Y+ + +C+ ++ + LKEM G P++ITY+IV+ L K ++EA ++ +
Sbjct: 255 IFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLK 314
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
M+ P+ Y+ LI + G+++ A E+F ++ +G+ P V+TY MIS
Sbjct: 315 AMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGG 374
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
A +L ++M + C P ++ TY
Sbjct: 375 LSNEACELFREMAVNGCLP-----------------------------------NSCTYN 399
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+++G + +G A EEM+ KG ST++ML +
Sbjct: 400 VIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRMLSD 438
>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
Length = 569
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/361 (28%), Positives = 172/361 (47%), Gaps = 6/361 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G P NT++ L ++ L +M EL G V+ T ++ L + D+
Sbjct: 41 GLSPDPVELNTILAELCDARDTTTAMALFDKMAEL--GAVNHTTYYNLIHPLCKARLLDE 98
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
A+ MK G+ T +V++ L + + HA V+ + D P + L+HG
Sbjct: 99 AMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAHPPDFLTYTKLVHG 158
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
K ++ DA + ++EM PD + T ++ C + ++EM +G +
Sbjct: 159 LSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAAN 218
Query: 336 VITYTIVMHALGKAKQINEALKVY-EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
ITY+ ++ L K ++++EA+ + ++ PD YS++I L KAGR++DA +IF
Sbjct: 219 AITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIF 278
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
E+M P +TYN++I C + + A++LL KM +D C PD TY L+ C+
Sbjct: 279 EEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKM 335
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
R+ L M N +S D T+ SLV GL G++E A EE+ +G P TY
Sbjct: 336 GRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTY 395
Query: 515 K 515
Sbjct: 396 N 396
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 177/346 (51%), Gaps = 7/346 (2%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N ++ L ++ + + ++M++ + T + ++ L + GR DAV+ +
Sbjct: 117 LHNVVIGGLCRAGRLRHALGVYRQMNDAHP--PDFLTYTKLVHGLSKAGRLRDAVQVLQE 174
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M D L+V++ +L G+ V+ A ++ E + ++ ++ L+ G CK +
Sbjct: 175 MVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCER 234
Query: 282 VDDAQKAM-KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+D+A + E+ ++GF+PD+V+Y+ I+ C+ R D +EM C P+ ITY
Sbjct: 235 LDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYN 291
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ +A ++EA+++ KM D+C PD Y++L+ K GR+ DA E+F+ M
Sbjct: 292 SLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVAN 351
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ P+V+T+ +++ C E+AL+LL+++ C P TY ++ C+ +++
Sbjct: 352 KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKA 411
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+ + TY LV G +G+ + A + +++ S+G
Sbjct: 412 EELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 457
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 172/365 (47%), Gaps = 18/365 (4%)
Query: 159 HTPEMYNTMVDVLGKSKKFCL------MWELVKEMDELNNGYVSLA-TMSTIMRRLVRGG 211
H P+ NT + V+ +S CL ELV+EM L+ G + A T S ++ L +
Sbjct: 180 HVPD--NTTLTVVVQS--LCLGDRVDDARELVEEM--LHRGMAANAITYSALVDGLCKCE 233
Query: 212 RYDDAVEAFRG-MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
R D+AV G + + G D S ++D L K + A +F E C P ++ +N
Sbjct: 234 RLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS-CAP-TAITYN 291
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI G+C+ +D+A + + +M +PDV++YT + +C+ + ++M
Sbjct: 292 SLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVAN 351
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P V+T+T ++ L ++ +AL++ E++ C P Y+ ++ K+ +V+ A
Sbjct: 352 KLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKA 411
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM--EEDLCKPDCETYAPLL 448
E+ D + +G VPN +TYN +++ C + AL+ L ++ E C YA +L
Sbjct: 412 EELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIIL 471
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
CR R M + A T+A++V L ++ + + A EEMI G
Sbjct: 472 DALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHT 531
Query: 509 PYHST 513
P T
Sbjct: 532 PGPGT 536
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 195/401 (48%), Gaps = 24/401 (5%)
Query: 47 SLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKI--- 103
+L + + D+ PD + G ++ RL + ++ ++S H D ++ +
Sbjct: 134 ALGVYRQMNDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQS 193
Query: 104 --LSKQYQSPDKVVEALKGCGVSVS----NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGY 157
L + ++VE + G++ + ++LV+ + L A T+ G+
Sbjct: 194 LCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK--CERLDEAVALLLGEVTRRGF 251
Query: 158 MHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
TP++ Y+T++D L K+ + + + V +E++ ++ T ++++ R G D+
Sbjct: 252 --TPDIVTYSTVIDGLCKAGR---LRDAVDIFEEMSCAPTAI-TYNSLIGGYCRAGDMDE 305
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILI 273
A+ M D + LM K ++ AY++F + LS + F L+
Sbjct: 306 AIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMV-ANKLSPDVVTFTSLV 364
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G C +++DA + ++E+ ++G P + +Y C ++ YC+ RK ++ + + + +G
Sbjct: 365 DGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFV 424
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDD--CLPDTSFYSSLIFILSKAGRVKDAN 391
P+ +TY I++ +A + ++AL+ +++ S+ C + Y+ ++ L + GR DA
Sbjct: 425 PNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAV 484
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
+ +E+M ++G VP T+ T++ + C + + A +LL++M
Sbjct: 485 QFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEM 525
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 154/351 (43%), Gaps = 41/351 (11%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
++ G+ D L+ ++ L A +F + + ++ + LIH CK R +
Sbjct: 37 IRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYNLIHPLCKARLL 96
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D+A + +M +G +P + + I CR R ++M + P +TYT +
Sbjct: 97 DEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKL 155
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM----- 397
+H L KA ++ +A++V ++M S +PD + + ++ L RV DA E+ E+M
Sbjct: 156 VHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGM 215
Query: 398 -------------------------------KKQGVVPNVLTYNTMISSACARSEEENAL 426
++G P+++TY+T+I C +A+
Sbjct: 216 AANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 275
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+ ++M C P TY L+ CR M LL M ++ + D TY +L+
Sbjct: 276 DIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAF 332
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
+ G+L+ A F++M++ + P T+ L + L + R+ +A E + ++
Sbjct: 333 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 106/240 (44%), Gaps = 4/240 (1%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL-KEMQEKGCKPSVITYTIVMHALGKAK 350
M G+ D ++ + R + L E++++G P + ++ L A+
Sbjct: 1 MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
A+ +++KM + T++Y +LI L KA + +A + DMK +G+ P L +N
Sbjct: 61 DTTTAMALFDKMAELGAVNHTTYY-NLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I C +AL + ++M D PD TY L+ + R++ +L M
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNA 529
D T +V+ L +++ A EEM+ +G+ TY L + L K +RL A
Sbjct: 179 RHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEA 238
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/238 (19%), Positives = 95/238 (39%), Gaps = 39/238 (16%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ K + +EL ++M N + T ++++ L GR +DA+E +
Sbjct: 325 YTTLMSAFCKMGRLDDAYELFQQM-VANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEI 383
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-----------------C----- 261
+ G + ++D K N V A ++ +F+ C
Sbjct: 384 TRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRT 443
Query: 262 ----------------IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
P S ++ I++ C+ + DDA + +EM Q+G+ P ++
Sbjct: 444 DQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFA 503
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
+ C+ ++ + L+EM + G P T V+ A +A I +A ++ +++
Sbjct: 504 TVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 163/322 (50%), Gaps = 4/322 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV---F 255
T + ++R L GR ++AV M+ G + + L+ + ++ A +V
Sbjct: 154 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 213
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E + P + FN +++G CK +++ A+K EM ++G +PDVVSY + YC+
Sbjct: 214 REEGNAKP-NLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVG 272
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ EM ++G P V+T+T ++HA KA + +A+ + +M+ + ++
Sbjct: 273 CLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFT 332
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI K G + DA E+M+K G+ P+V+ YN +I+ C + A +L+++ME
Sbjct: 333 ALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAK 392
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
KPD TY+ ++ C+ + L M K V DA TY+SL+RGL E +L A
Sbjct: 393 RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDA 452
Query: 496 CSFFEEMISKGIVPYHSTYKML 517
C FE M+ G+ P TY L
Sbjct: 453 CELFENMLQLGVQPDEFTYTTL 474
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 169/327 (51%), Gaps = 2/327 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK-DTRALSVLMDTLVKGNSVEHAYKVFLE 257
T +T++ R G D A M++ G K + + +++ L K +E A KVF E
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248
Query: 258 F-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
++ + +N L+ G+CK + ++ EM Q+G PDVV++T I C+ +
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + +M+E+G + + +T+T ++ K +++AL E+M+ P Y++
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI K GR+ A E+ +M+ + V P+V+TY+T+IS C ++A +L QKM +
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY+ L++ C +KR+ L +M + V D TY +L+ G + G +E A
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK 523
S +EMI KG++P TY +L L K
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSK 515
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 182/461 (39%), Gaps = 87/461 (18%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+V ++ + +V M E N +L T ++++ L + GR + A + F M
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 249
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSSQI--------- 268
+ G+ D + + L+ K + + VF E D + +S I
Sbjct: 250 VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL 309
Query: 269 ---------------------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
F LI G+CK +DDA A++EM + G P VV Y
Sbjct: 310 EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNAL 369
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I YC+ + ++EM+ K KP V+TY+ ++ K ++ A ++ +KM
Sbjct: 370 INGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
LPD YSSLI L + R+ DA E+FE+M + GV P+ TY T+I C E AL
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 489
Query: 428 LLQKMEEDLCKPDCETYAPL----------------------------------LKMCCR 453
L +M PD TY+ L L +CC
Sbjct: 490 LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 549
Query: 454 KKRMKVLNFLL----------------THMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
K K + LL M + +D Y+ L+ G G + A S
Sbjct: 550 KAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALS 609
Query: 498 FFEEMISKGIVPYH-STYKMLEEKLEKKRLGNAKERINKLL 537
F ++M+ G P ST ++ E+ + A I LL
Sbjct: 610 FHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 177/394 (44%), Gaps = 56/394 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++ G K CL L + G V + T ++++ + G + AV
Sbjct: 261 YNTLLS--GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 318
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
M++ G+ + + L+D K ++ A E + C I S +N LI+G+CK +
Sbjct: 319 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 378
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A++ ++EM + PDVV+Y+ I YC+ + ++M +KG P ITY+
Sbjct: 379 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 438
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L + K++N+A +++E M PD Y++LI K G V+ A + ++M ++G
Sbjct: 439 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 498
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V+P+V+TY+ +I+ + + A +LL K+ + PD Y L+ +CC K K +
Sbjct: 499 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALM-LCCSKAEFKSVV 557
Query: 462 FLLT---------------------------------------------------HMFKN 470
LL M ++
Sbjct: 558 ALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRS 617
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
S ++ + SLVRGL E G + A + +++++
Sbjct: 618 GFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLT 651
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 115/257 (44%), Gaps = 2/257 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
F+ LI + + A A+ G++P V +Y + + L M
Sbjct: 86 FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLAL-SDASLPSARRFLSSML 144
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
G P+V TY I++ AL ++ EA+ V M+ C P+ Y++L+ +AG +
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204
Query: 389 DANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A + M+++G PN++T+N+M++ C E A K+ +M + PD +Y L
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
L C+ + + + M + + D T+ SL+ ++G LE A + +M +G+
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324
Query: 508 VPYHSTYKMLEEKLEKK 524
T+ L + KK
Sbjct: 325 RMNEVTFTALIDGFCKK 341
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/258 (20%), Positives = 104/258 (40%), Gaps = 17/258 (6%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y++++ L + K+ EL + M +L T +T++ + G + A+ M
Sbjct: 436 YSSLIRGLCEEKRLNDACELFENMLQLGVQPDEF-TYTTLIDGHCKEGNVEKALSLHDEM 494
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--------------- 268
+ GV D SVL++ L K + A+++ + P+ I
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFK 554
Query: 269 -FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
L+ G+C + +A K + M + + D Y+ I +CR + RK K+M
Sbjct: 555 SVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQM 614
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
G P+ + ++ L + + EA + + + L D +LI + K G V
Sbjct: 615 LRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCCPLADAEASKALIDLNRKEGNV 674
Query: 388 KDANEIFEDMKKQGVVPN 405
++ M + G++P+
Sbjct: 675 DALIDVLCGMARDGLLPS 692
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 183/367 (49%), Gaps = 4/367 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ G+ Y +++ L KS L +L ++M+E N S+ S ++ L + G
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE-RNIKASVVQYSIVIDSLCKDGS 260
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFN 270
+DDA+ F M+ G++ D S L+ L + K+ E ++ IP F+
Sbjct: 261 FDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIP-DVVTFS 319
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI + K K+ +A++ EM +G +PD ++Y I+ +C+E + + M K
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
GC+P ++TY+I++++ KAK++++ ++++ ++ S +P+T Y++L+ ++G++ A
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+F++M +GV P+V+TY ++ C E AL++ +KM++ Y ++
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C ++ L + V D TY ++ GL + G L A F +M G P
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559
Query: 511 HSTYKML 517
TY +L
Sbjct: 560 DFTYNIL 566
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 159/328 (48%), Gaps = 1/328 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T ++ RL + G A++ FR M++ ++ S+++D+L K S + A +F E
Sbjct: 211 VTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNE 270
Query: 258 FK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ I ++ LI G C K DD K ++EM + PDVV+++ I+ + +E
Sbjct: 271 MEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK 330
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + EM +G P ITY ++ K ++EA ++++ M S C PD YS
Sbjct: 331 LLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSI 390
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI KA RV D +F ++ +G++PN +TYNT++ C + A +L Q+M
Sbjct: 391 LINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
P TY LL C + + M K+ +++ G Y ++ G+ + K++ A
Sbjct: 451 VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAW 510
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKK 524
S F + KG+ P TY ++ L KK
Sbjct: 511 SLFCSLSDKGVKPDVVTYNVMIGGLCKK 538
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 171/367 (46%), Gaps = 8/367 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++D L K F L EM E+ + T S+++ L G++DD + R M
Sbjct: 248 YSIVIDSLCKDGSFDDALSLFNEM-EMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREM 306
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
+ D S L+D VK + A +++ E I + +N LI G+CK +
Sbjct: 307 IGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCL 366
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSVITY 339
+A + M +G PD+V+Y+ I YC+ K +VDD + +E+ KG P+ ITY
Sbjct: 367 HEANQMFDLMVSKGCEPDIVTYSILINSYCKAK---RVDDGMRLFREISSKGLIPNTITY 423
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ ++ ++N A +++++M S P Y L+ L G + A EIFE M+K
Sbjct: 424 NTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQK 483
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+ + YN +I C S+ ++A L + + KPD TY ++ C+K +
Sbjct: 484 SRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSE 543
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ L M ++ + D TY L+R + L + EEM G ST KM+ +
Sbjct: 544 ADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVID 603
Query: 520 KLEKKRL 526
L +RL
Sbjct: 604 MLSDRRL 610
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 179/394 (45%), Gaps = 13/394 (3%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q+ + TP +N + + ++K++ L+ K M ELN + TM+ ++ R +
Sbjct: 63 QSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGM-ELNGIEHDMYTMTIMINCYCRKKKL 121
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV---FLEFK---DCIPLSSQ 267
A K G E DT S L++ V A + +E K D + +S+
Sbjct: 122 LFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVST- 180
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
LI+G C +V +A + M + GF PD V+Y + C+ + D ++M
Sbjct: 181 ----LINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+E+ K SV+ Y+IV+ +L K ++AL ++ +M+ D YSSLI L G+
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKW 296
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
D ++ +M + ++P+V+T++ +I + A +L +M PD TY L
Sbjct: 297 DDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSL 356
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C++ + N + M D TY+ L+ ++ +++ F E+ SKG+
Sbjct: 357 IDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGL 416
Query: 508 VPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHA 540
+P TY L + +L AKE ++++
Sbjct: 417 IPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRG 450
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 123/302 (40%), Gaps = 36/302 (11%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
KV+DA + M Q P + + R K + V K M+ G + + T T
Sbjct: 50 KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMT 109
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + K++ A V + PDT +S+L+ GRV +A + + M +
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK------ 454
P+++T +T+I+ C + AL L+ +M E +PD TY P+L C+
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 455 ----KRMKVLNF-------------------------LLTHMFKNDVSMDAGTYASLVRG 485
++M+ N L M + D TY+SL+ G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAKEQK 544
L GK + EMI + I+P T+ L + K+ +L AKE N+++
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 545 TF 546
T
Sbjct: 350 TI 351
>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
Length = 742
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 115/405 (28%), Positives = 198/405 (48%), Gaps = 15/405 (3%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
N L P FG A T +YN +++VL + K L+ + EM +
Sbjct: 134 NQLQPLFGI--QADTV--------VYNHLLNVLVEGSKMKLLESVYSEMGA-RGIKPDVV 182
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T+M+ L R + AV M GV D + LM V+ S+E A +V
Sbjct: 183 TFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARM 242
Query: 259 KDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ ++++ N+LI+G+CK +V+DA +++ GF PD ++Y F+ C+
Sbjct: 243 LEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHV 302
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ M ++G P V TY IV++ L K Q+ EA + +M CLPD + +++L
Sbjct: 303 GHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTL 362
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L R+++A ++ + +GV P+V T+N +I++ C + AL+L ++M+ C
Sbjct: 363 IAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGC 422
Query: 438 KPDCETYAPLL-KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY L+ +C K K L+ LL M TY +++ GL + ++E A
Sbjct: 423 TPDEVTYNTLIDNLCSLGKLGKALD-LLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAE 481
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHA 540
F++M +GI T+ L + L K K++ +A IN++++
Sbjct: 482 EVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEG 526
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/476 (25%), Positives = 218/476 (45%), Gaps = 19/476 (3%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL 118
+PDE + G+VE + R+ +R+L E + +L Y +V +AL
Sbjct: 213 APDETTFTTLMQGFVEEGSIEAALRVKARML-EMGCSATKVTVNVLINGYCKLGRVEDAL 271
Query: 119 KGCGVSVSNSLV--EQTLRRFSNDLTPAFGFFTWAK-----TQTGYMHTPEM--YNTMVD 169
+++ + T F N L K Q G H P++ YN +V+
Sbjct: 272 GYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEG--HDPDVFTYNIVVN 329
Query: 170 VLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV 228
L K+ + ++ +M ++ G + + T +T++ L G R ++A++ R + GV
Sbjct: 330 CLCKNGQLEEAKGILNQM--VDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGV 387
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQ 286
D ++L++ L K A ++F E K+ C P +N LI C K+ A
Sbjct: 388 SPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTP-DEVTYNTLIDNLCSLGKLGKAL 446
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
+K+M G ++Y I+ C++ + ++ +M +G + IT+ ++ L
Sbjct: 447 DLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGL 506
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
K K+I++A + +M S+ P+ Y+S++ K G +K A +I E M G +V
Sbjct: 507 CKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDV 566
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+TY T+I+ C + ALK+L+ M +P + Y P+L+ R+ ++ L
Sbjct: 567 VTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFRE 626
Query: 467 MFKNDVSMDAGTYASLVRGLIESGK-LELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M + DA TY + RGL G ++ A F EM+ KG +P S+++ML E L
Sbjct: 627 MAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEFSSFRMLAEGL 682
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 161/328 (49%), Gaps = 3/328 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T + L + A++ M + G + D +++++ L K +E A + +
Sbjct: 288 TYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQM 347
Query: 259 KD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
D C+P FN LI C ++++A +++ +G SPDV ++ I C+ D
Sbjct: 348 VDRGCLP-DITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGD 406
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+EM+ GC P +TY ++ L ++ +AL + + M+S C T Y++
Sbjct: 407 PHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNT 466
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L K R+++A E+F+ M QG+ N +T+NT+I C + ++A L+ +M +
Sbjct: 467 IIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEG 526
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+P+ TY +L C++ +K +L M N +D TY +L+ GL ++G+ ++A
Sbjct: 527 LQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVAL 586
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M KG+ P Y + + L ++
Sbjct: 587 KVLRGMRIKGMRPTPKAYNPVLQSLFRR 614
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 173/392 (44%), Gaps = 4/392 (1%)
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
T R D A A + + PE+Y ++ LG LM LV EM +
Sbjct: 46 TALREQPDPDAALRMLNAALARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGH 105
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK--YGVEKDTRALSVLMDTLVKGNSVEH 250
V L + + + +DDAV+ + +G++ DT + L++ LV+G+ ++
Sbjct: 106 -QVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKL 164
Query: 251 AYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
V+ E I FN L+ C+ +V A ++EM +G +PD ++T ++
Sbjct: 165 LESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQ 224
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
+ E M E GC + +T ++++ K ++ +AL ++ +D P
Sbjct: 225 GFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEP 284
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D Y++ + L + V A ++ + M ++G P+V TYN +++ C + E A +L
Sbjct: 285 DQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGIL 344
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M + C PD T+ L+ C R++ L + VS D T+ L+ L +
Sbjct: 345 NQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKV 404
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
G LA FEEM + G P TY L + L
Sbjct: 405 GDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436
>gi|357138018|ref|XP_003570595.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Brachypodium distachyon]
Length = 548
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 218/480 (45%), Gaps = 20/480 (4%)
Query: 37 AESPSSTESPSLPSWIKFFDSQSPDEDFVIPSLAG---WVESHRLNEKSRISSRVLSENH 93
A +PS SPS P + +Q+P +P+L + H L + RV S +
Sbjct: 18 AAAPSF--SPSEPCSLPLNLTQTPPPRRHLPNLLPVRRFSSGHVLLPTNLQEERVASLS- 74
Query: 94 ETDVDKI-SKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAK 152
D+I + + S D AL G ++ LV + R + AF FF WA
Sbjct: 75 ----DRIYDAVTGTEEGSNDGTEAALDALGAELTTPLVSDVMHRLRYEEKLAFRFFAWAS 130
Query: 153 TQTGYMHTPEMYNTMVDVLG----KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLV 208
Q Y H YN ++D L K+++F ++ +++ M V + + I+R
Sbjct: 131 QQDNYEHDQAAYNEVIDTLSGTRYKARQFGVLCDVLDHMKRHRTRSVPVEDLLAILRAYT 190
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
+ A + + +T AL++L+D K V A VF K + +++
Sbjct: 191 EKHLTNLRKLAKKRRVRMRTPPETDALNILLDAFCKCGMVREAETVFGRVKRKLQGNAET 250
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+NIL GWC+ R A K ++EM +P+ +Y I+ +C + + + M+
Sbjct: 251 YNILFFGWCRARDPKKAMKVLEEMILMKHAPESFTYIAAIDSFCSAGLVSEAKELFEFMR 310
Query: 329 EKGCK---PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
+G P+ Y++++ AL KA ++++ ++ M C+PD S + LI +
Sbjct: 311 TEGSSISSPTAKAYSVMIVALVKADRMDDCFELISDMIKLGCMPDVSTFKDLIEGMCLVD 370
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
++ A + E+M K G P+++TYN + C + ++ALKL ++M E C+P TY
Sbjct: 371 KIDTAYFVLEEMGKAGFPPDIVTYNCFLEVLCNLQKADDALKLCERMIEAHCEPSVHTYN 430
Query: 446 PLLKMCCR-KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ M + ++ + L+ L M K TY ++ GL + G+ E A + +E+I+
Sbjct: 431 MLMVMFFQMREPHRALDIWL-EMDKRGCRRAVDTYEIMIDGLFDCGRTEDATNLLDEVIN 489
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 175/345 (50%), Gaps = 3/345 (0%)
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
++EM + + T +T++ L + G A+E M + G + D + ++ L
Sbjct: 281 FIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 340
Query: 243 VKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
K V+ A +V + +DC P ++ +N LI CK +V++A + + + +G PD
Sbjct: 341 CKLGEVKEAVEVLDQMITRDCSP-NTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
V ++ I+ C ++ R + +EM+ KGC+P TY +++ +L +++EAL + +
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+M+ C Y++LI KA + ++A EIF++M+ GV N +TYNT+I C
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
E+A +L+ +M + KPD TY LL CR +K ++ M N D TY
Sbjct: 520 RVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+L+ GL ++G++E+A + KGI Y + + L +KR
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKR 624
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 162/323 (50%), Gaps = 6/323 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T+M+ + G D A+ M ++G +++V++ K VE A E
Sbjct: 226 TFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM 285
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+D FN L++G CK V A + M M Q+G+ PDV +Y I C+ +
Sbjct: 286 SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGE 345
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
++ + L +M + C P+ +TY ++ L K Q+ EA ++ + S LPD ++S
Sbjct: 346 VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 405
Query: 377 LI--FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
LI L++ RV A E+FE+M+ +G P+ TYN +I S C++ + + AL +L++ME
Sbjct: 406 LIQGLCLTRNHRV--AMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C TY L+ C+ + + + M + VS ++ TY +L+ GL +S ++E
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523
Query: 495 ACSFFEEMISKGIVPYHSTYKML 517
A ++MI +G P TY L
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSL 546
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/402 (27%), Positives = 192/402 (47%), Gaps = 8/402 (1%)
Query: 113 KVVEALKGCGVSVSNSLVEQTLRRFSND--LTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
++ E + G S SN V + F + + A F Q G+ +NT+V+
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K+ E++ M L GY + T ++++ L + G +AVE M
Sbjct: 305 LCKAGHVKHAIEIMDVM--LQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCS 362
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
+T + L+ TL K N VE A ++ L K +P FN LI G C TR A +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILP-DVCTFNSLIQGLCLTRNHRVAME 421
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+EM +G PD +Y I+ C + + + LK+M+ GC SVITY ++
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
KA + EA +++++M+ ++ Y++LI L K+ RV+DA ++ + M +G P+
Sbjct: 482 KANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKY 541
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
TYN++++ C + + A ++Q M + C+PD TY L+ C+ R++V + LL +
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+++ Y +++GL K A + F EM+ + P
Sbjct: 602 QMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 166/395 (42%), Gaps = 5/395 (1%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE 189
V T FS +LTP ++A + + + ++ ++D L L +
Sbjct: 18 VTLTHHSFSLNLTPPSSTISFASPHSAALSSTDV--KLLDSLRSQPDDSAALRLFNLASK 75
Query: 190 LNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE 249
N A I+ RL R G +DD + MK E T +L+++ + +
Sbjct: 76 KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQD 135
Query: 250 HAYKVFLEFKDCIPL--SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
V D L + +N +++ + + + +M G PDV ++
Sbjct: 136 EILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVL 195
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I+ CR R L++M G P T+T VM + ++ AL++ E+M C
Sbjct: 196 IKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGC 255
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ-GVVPNVLTYNTMISSACARSEEENAL 426
+ ++ K GRV+DA ++M Q G P+ T+NT+++ C ++A+
Sbjct: 256 SWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAI 315
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+++ M ++ PD TY ++ C+ +K +L M D S + TY +L+ L
Sbjct: 316 EIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTL 375
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ ++E A + SKGI+P T+ L + L
Sbjct: 376 CKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 124/274 (45%), Gaps = 12/274 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++D L K ++K+M EL+ S+ T +T++ + + +A E F M
Sbjct: 438 YNMLIDSLCSKGKLDEALNMLKQM-ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEM 496
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ-----IFNILIHGWCK 278
+ +GV +++ + L+D L K VE A ++ D + + Q +N L+ +C+
Sbjct: 497 EVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLM----DQMIMEGQKPDKYTYNSLLTHFCR 552
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ A ++ M G PD+V+Y I C+ L+ +Q KG +
Sbjct: 553 GGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHA 612
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF--ILSKAGRVKDANEIFED 396
Y V+ L + ++ EA+ ++ +M + P + ++F + + G +++A + +
Sbjct: 613 YNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVE 672
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
+ ++G VP + + S EE +KL+
Sbjct: 673 LLEKGFVPEFSSLYMLAEGLLTLSMEETLVKLVN 706
>gi|242061252|ref|XP_002451915.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
gi|241931746|gb|EES04891.1| hypothetical protein SORBIDRAFT_04g009890 [Sorghum bicolor]
Length = 571
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 201/425 (47%), Gaps = 9/425 (2%)
Query: 84 ISSRVLSENHETDV--DKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDL 141
I++ V H V ++ +IL PD +AL+ + V + LV + ++ +
Sbjct: 46 IATTVPRYTHSVRVLDERFIRILKIFKWGPD-AEKALEVLMLRVDHWLVREIMKT-DIGV 103
Query: 142 TPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS 201
FF WA + Y H Y ++ L +++ MW++++EM V+ +S
Sbjct: 104 NVKMQFFRWAAKRRNYEHDTSTYMALIHCLEVVEQYGEMWKMIQEMVRNPICVVTPTELS 163
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-- 259
++R L A+ F +K + +A + ++ L+ E ++++ E
Sbjct: 164 EVVRMLGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSTE 223
Query: 260 -DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
C P + ++ LI +CK + D A + + EM G P YT + + + D
Sbjct: 224 GHCFP-DTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALFFKLNDVH 282
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+EM+ + C+P V TYT ++ LGKA +I+EA + +M+ + C PDT +++I
Sbjct: 283 GALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTIVMNNMI 342
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC-ARSEEENALKLLQKMEEDLC 437
L KAGR+ DA ++F++M +P+V+TYNT+I + ++S ++M+E
Sbjct: 343 NFLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGI 402
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P TY+ L+ C+ RM+ LL M + Y SL+ L ++ + +LAC
Sbjct: 403 SPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACE 462
Query: 498 FFEEM 502
F+E+
Sbjct: 463 LFQEL 467
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 105/408 (25%), Positives = 188/408 (46%), Gaps = 13/408 (3%)
Query: 125 VSNSLVEQTLRRFSND--LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
V+ + + + +R N ++ A F KT+ T + YN+M+ +L ++ + E
Sbjct: 157 VTPTELSEVVRMLGNAKMVSKAIAIFYQIKTRKC-QPTAQAYNSMIIMLMHEGQYEKVHE 215
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
L EM + + T S ++ + GR D A++ MK G++ T+ ++L+
Sbjct: 216 LYNEMSTEGHCFPDTMTYSALISAFCKLGRRDSAIQLLNEMKDNGMQPTTKIYTMLVALF 275
Query: 243 VKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
K N V A +F E + C P + LI G K ++D+A EM ++G PD
Sbjct: 276 FKLNDVHGALSLFEEMRHQYCRP-DVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPD 334
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKG---CKPSVITYTIVMHALGKAK-QINEAL 356
+ I + ++DD +K QE G C PSV+TY ++ AL ++K + +E
Sbjct: 335 TIVMNNMINFLGKAG---RLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVP 391
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+E+MK P + YS LI K R++ A + E+M ++G P Y ++I +
Sbjct: 392 SWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDAL 451
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
+ A +L Q+++E+ YA ++K + R+ + M K + D
Sbjct: 452 GKAKRYDLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDV 511
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
Y +L+ GL +G L+ A S M G +P ++Y ++ L+K+
Sbjct: 512 YAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLQKQ 559
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 97/225 (43%), Gaps = 38/225 (16%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG-GRYDDAVEAFRGM 223
N M++ LGK+ + +L +EM L S+ T +TI++ L R + F M
Sbjct: 339 NNMINFLGKAGRLDDAMKLFQEMGTLR-CIPSVVTYNTIIKALFESKSRASEVPSWFERM 397
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAY------------------------------- 252
K+ G+ + S+L+D K N +E A
Sbjct: 398 KESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRY 457
Query: 253 ----KVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
++F E K +C SS+++ ++I K ++DDA EM + G +PDV +Y
Sbjct: 458 DLACELFQELKENCGSSSSRVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNAL 517
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQI 352
+ R + T++ MQE GC P + +Y I+++ L K + +
Sbjct: 518 MSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLQKQEDL 562
>gi|255540881|ref|XP_002511505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550620|gb|EEF52107.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 876
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/374 (29%), Positives = 185/374 (49%), Gaps = 8/374 (2%)
Query: 85 SSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPA 144
S+R + N V+ ++ IL + P EAL S+ Q L++ D T A
Sbjct: 307 STRRFASNGHI-VENVAHILRQIRWGP-AAEEALANLNYSMDPYQANQVLKQL-QDHTVA 363
Query: 145 FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM 204
FF W K Q G+ H Y TMV +LG++K+F + +L+ +M + + ++ T + ++
Sbjct: 364 LNFFYWLKRQPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVK-DGCQPNVVTYNRLI 422
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL 264
R +DAV+ F M++ G E D L+D K ++ A +++ + L
Sbjct: 423 HSYGRANYLNDAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQ-AAGL 481
Query: 265 SSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
S F +++I+ K + A K EM +QG P++V+Y I + ++++
Sbjct: 482 SPDTFTYSVIINCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALK 541
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
++MQ G +P +TY+IVM LG ++EA V+ +MK + +PD Y L+ +
Sbjct: 542 LYRDMQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLLVDLWG 601
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
KAG V+ A + ++ M G+ PNV T N+++S+ + +A LLQ M E P +
Sbjct: 602 KAGNVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQ 661
Query: 443 TYAPLLKMCCRKKR 456
TY LL CC + R
Sbjct: 662 TYTLLLS-CCTEAR 674
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 133/261 (50%), Gaps = 1/261 (0%)
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ ++ K + +M + G P+VV+Y I Y R D EMQ GC+P +
Sbjct: 392 RAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEMQRVGCEPDRV 451
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++ KA ++ AL++Y++M++ PDT YS +I L KAG + A+++F +M
Sbjct: 452 TYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHLAAAHKLFCEM 511
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+QG VPN++TYN MI+ ++ALKL + M+ +PD TY+ ++++ +
Sbjct: 512 VEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIVMEVLGHCGYL 571
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST-YKM 516
+ + M + + D Y LV ++G +E A +++ M++ G+ P T +
Sbjct: 572 DEAEAVFSEMKRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQTMLNTGLRPNVPTCNSL 631
Query: 517 LEEKLEKKRLGNAKERINKLL 537
L L +L +A + +L
Sbjct: 632 LSAFLRVHKLADAYNLLQSML 652
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 114/224 (50%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q GF+ D +YT + R K F ++ L +M + GC+P+V+TY ++H+ G+A +N
Sbjct: 373 QPGFNHDGHTYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLN 432
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
+A+ V+ +M+ C PD Y +LI I +KAG + A E+++ M+ G+ P+ TY+ +I
Sbjct: 433 DAVDVFNEMQRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVII 492
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ A KL +M E C P+ TY ++ + + + + L M
Sbjct: 493 NCLGKAGHLAAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQ 552
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
D TY+ ++ L G L+ A + F EM K VP Y +L
Sbjct: 553 PDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVPDEPVYGLL 596
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 88/184 (47%)
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYT ++ LG+AKQ K+ ++M D C P+ Y+ LI +A + DA ++F +M
Sbjct: 382 TYTTMVGILGRAKQFGAINKLLDQMVKDGCQPNVVTYNRLIHSYGRANYLNDAVDVFNEM 441
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
++ G P+ +TY T+I + AL++ Q+M+ PD TY+ ++ + +
Sbjct: 442 QRVGCEPDRVTYCTLIDIHAKAGFLDFALEMYQRMQAAGLSPDTFTYSVIINCLGKAGHL 501
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ L M + + TY ++ ++ + A + +M S G P TY ++
Sbjct: 502 AAAHKLFCEMVEQGCVPNLVTYNIMIALQAKARNYQSALKLYRDMQSAGFQPDKVTYSIV 561
Query: 518 EEKL 521
E L
Sbjct: 562 MEVL 565
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 116/282 (41%), Gaps = 41/282 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ +++ LGK+ +L EM E G V +L T + ++ + Y A++ +R
Sbjct: 488 YSVIINCLGKAGHLAAAHKLFCEMVE--QGCVPNLVTYNIMIALQAKARNYQSALKLYRD 545
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTR 280
M+ G + D S++M+ L ++ A VF E K + +P ++ +L+ W K
Sbjct: 546 MQSAGFQPDKVTYSIVMEVLGHCGYLDEAEAVFSEMKRKNWVP-DEPVYGLLVDLWGKAG 604
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V+ A + + M G P+V + + + R + L+ M E G PS+ TYT
Sbjct: 605 NVEKAWQWYQTMLNTGLRPNVPTCNSLLSAFLRVHKLADAYNLLQSMLELGLNPSLQTYT 664
Query: 341 IVMHALGKAKQI-----------------------------------NEALKVYEKMKSD 365
+++ +A+ + A K + M S+
Sbjct: 665 LLLSCCTEARSPYDMGIYCELMAVTGHPAHMFLLSLPSAGPDGQNVRDHASKFLDLMHSE 724
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
D +++ L K+G ++A ++E ++ V P+ +
Sbjct: 725 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQRNVYPDAV 766
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 183/375 (48%), Gaps = 8/375 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N M+ L + K EL+++M N T +T++ GR A+E R M
Sbjct: 119 FNIMLRHLCATGKPVRALELLRQMPRPNA-----VTYNTVIAGFCARGRVQAALEVMREM 173
Query: 224 K-KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
+ + G+ D + L+ K +E A KVF E K + S+ ++N LI G+C
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+D A + ++M Q+G + V +Y + + L+EMQ+ G P V TY
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN 293
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ K +AL+V+E+M Y+SLI++ S+ G+V++ + +F K+
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+V+ YN +I+S C + E A +++ +ME+ PD TY L++ C R+
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEA 413
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L+ M K + D +Y +L+ G G ++ A +EM+ KG P TY L +
Sbjct: 414 RTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQG 473
Query: 521 LEKKRLGNAKERINK 535
L K R G+ E + K
Sbjct: 474 LCKIRQGDDAENLMK 488
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/317 (26%), Positives = 150/317 (47%), Gaps = 8/317 (2%)
Query: 176 KFCLMWELVKEMDE-LNNGYVSLATMSTIMRRLVRG----GRYDDAVEAFRGMKKYGVEK 230
K M + VK DE L G V A + + L+ G G+ D A++ M + G+
Sbjct: 195 KIGRMEDAVKVFDEMLTKGEV--APSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAM 252
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
++LM L AY V E K+ +NILI+G+CK A +
Sbjct: 253 TVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVF 312
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
+EM Q+G V+YT I + R+ ++ D +KG +P V+ Y ++++
Sbjct: 313 EEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTG 372
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+ A ++ +M+ PD Y++L+ GR+ +A + ++M K+G+ P++++Y
Sbjct: 373 GDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSY 432
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
NT+IS + + ++AL++ +M + P TY L++ C+ ++ L+ M
Sbjct: 433 NTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVA 492
Query: 470 NDVSMDAGTYASLVRGL 486
++ D TY SL+ GL
Sbjct: 493 KGITPDDSTYISLIEGL 509
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 120/271 (44%), Gaps = 4/271 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGG 211
Q G T YN ++ L + + +++EM + NG+ + T + ++ + G
Sbjct: 246 VQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQK--NGFSPDVFTYNILINGYCKEG 303
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFN 270
A+E F M + GV + L+ + V+ ++F + K I ++N
Sbjct: 304 NEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYN 363
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI+ C ++ A + M EM ++ PD ++Y + +C + + EM ++
Sbjct: 364 ALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKR 423
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G +P +++Y ++ I +AL+V ++M P Y++LI L K + DA
Sbjct: 424 GIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDA 483
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
+ ++M +G+ P+ TY ++I E
Sbjct: 484 ENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 89/180 (49%), Gaps = 12/180 (6%)
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDC-LPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+++ A A+ +L++Y ++KS +P S + L + S A +F D+ +
Sbjct: 55 LLLTASAAARPHATSLRLYAQLKSLSVPIPVASLHPLLSSLPSAP-----AFALFADIYR 109
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+ T+N M+ CA + AL+LL++M +P+ TY ++ C + R++
Sbjct: 110 LRLPLCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQA 165
Query: 460 LNFLLTHMF-KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG-IVPYHSTYKML 517
++ M + ++ D TYA+L+ G + G++E A F+EM++KG + P Y L
Sbjct: 166 ALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNAL 225
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 180/377 (47%), Gaps = 11/377 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+V + + L+ M + Y T + I+R L GR +A+ M
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASMPVAPDAY----TYTPIIRGLCDRGRVGEALSLLDDM 202
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
G + +VL++ + K A +V E K C P + +N++I+G C+ +
Sbjct: 203 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTP-NIVTYNVIINGMCREGR 261
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VDDA++ + + GF PD VSYT ++ C K + V++ EM EK C P+ +T+ +
Sbjct: 262 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 321
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + + A++V E+M C +T+ + +I + K GRV DA + +M G
Sbjct: 322 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 381
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+ ++Y T++ C E+A +LL++M C P+ T+ + + C+K ++
Sbjct: 382 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 441
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ M ++ ++ TY +LV G G+++ A F M K P TY L L
Sbjct: 442 MLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGL 498
Query: 522 -EKKRLGNAKERINKLL 537
+RL A E + ++L
Sbjct: 499 CNAERLDAAAELLAEML 515
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 177/365 (48%), Gaps = 13/365 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y +++ + KS F E++ EM ++ T + I+ + R GR DDA E +
Sbjct: 214 YTVLLEAVCKSTGFGQAMEVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 272
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
YG + DT + + ++ L E ++F E K+C+P + F++L+ +C+
Sbjct: 273 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP-NEVTFDMLVRFFCRGGM 331
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT---LKEMQEKGCKPSVIT 338
V+ A + +++M G + + I C++ +VDD L M GC P I+
Sbjct: 332 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQG---RVDDAFQFLNNMGSYGCSPDTIS 388
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT V+ L +A++ +A ++ ++M +C P+ +++ I IL + G ++ A + E M
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ G N++TYN +++ C + ++AL+L M CKP+ TY LL C +R+
Sbjct: 449 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLD 505
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
LL M + D + + T+ LV + G ++ A E+M+ G P TY L
Sbjct: 506 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 565
Query: 519 EKLEK 523
+ + K
Sbjct: 566 DGITK 570
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 198/410 (48%), Gaps = 50/410 (12%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ Y T++ L +K++ + EL EM E N + T ++R RGG +
Sbjct: 276 GFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMME-KNCMPNEVTFDMLVRFFCRGGMVER 334
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILI 273
A++ M +G +T +++++T+ K V+ A++ + C P + + ++
Sbjct: 335 AIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP-DTISYTTVL 393
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G C+ + +DA++ +KEM ++ P+ V++ FI C++ + +++M E GC+
Sbjct: 394 KGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCE 453
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+++TY +++ +++ AL+++ M C P+T Y++L+ L A R+ A E+
Sbjct: 454 VNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAEL 510
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL----K 449
+M ++ PNV+T+N ++S C + + A++L+++M E C P+ TY LL K
Sbjct: 511 LAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITK 570
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA-------------- 495
C ++ +++L+ L++ N VS D TY+S++ L ++E A
Sbjct: 571 DCNSEEALELLHGLVS----NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRP 626
Query: 496 ---------------CS------FFEEMISKGIVPYHSTYKMLEEKLEKK 524
C+ FF M+S G +P TY L E L +
Sbjct: 627 KAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 676
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 186/399 (46%), Gaps = 15/399 (3%)
Query: 60 PDEDFVIPSLAGWVESHRLNEKSRISSRVLSEN---HETDVDKISKILSK--QYQSPDKV 114
PD L G + R + + + ++ +N +E D + + + + +V
Sbjct: 279 PDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 338
Query: 115 VEALKGCGVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGYMHTPEM--YNTMVDV 170
+E + G G + + +L + + AF F Y +P+ Y T++
Sbjct: 339 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL---NNMGSYGCSPDTISYTTVLKG 395
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
L +++++ EL+KEM N + T +T + L + G + A M ++G E
Sbjct: 396 LCRAERWEDAKELLKEMVR-KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 454
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
+ + L++ V+ A ++F C P ++ + L+ G C ++D A + +
Sbjct: 455 NIVTYNALVNGFCVQGRVDSALELFYSMP-CKP-NTITYTTLLTGLCNAERLDAAAELLA 512
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
EM Q+ +P+VV++ + +C++ + + +++M E GC P++ITY ++ + K
Sbjct: 513 EMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDC 572
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
EAL++ + S+ PD YSS+I +LS+ RV++A ++F ++ G+ P + YN
Sbjct: 573 NSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYN 632
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
++ + C R + A+ M + C P+ TY L++
Sbjct: 633 KILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIE 671
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 149/342 (43%), Gaps = 39/342 (11%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KD 260
++ + + GR DDA + M YG DT + + ++ L + E A ++ E K+
Sbjct: 357 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 416
Query: 261 CIP-----------------------LSSQI-----------FNILIHGWCKTRKVDDAQ 286
C P L Q+ +N L++G+C +VD
Sbjct: 417 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD--- 473
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
A++ + P+ ++YT + C + + L EM +K C P+V+T+ +++
Sbjct: 474 SALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 533
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
+ ++EA+++ E+M C P+ Y++L+ ++K ++A E+ + GV P++
Sbjct: 534 CQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDI 593
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+TY+++I E A+K+ +++ +P Y +L C++ +
Sbjct: 594 VTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAY 653
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
M N + TY +L+ GL L+ E+ S+G++
Sbjct: 654 MVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 695
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 109/237 (45%), Gaps = 11/237 (4%)
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A + + +G +PDV T I + CR L+ + G V Y ++
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
+ Q++ A ++ M PD Y+ +I L GRV +A + +DM +G P
Sbjct: 153 GYCRYGQLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM----KVL 460
+V+TY ++ + C + A+++L +M C P+ TY ++ CR+ R+ + L
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
N L ++ F+ D +Y ++++GL + + E F EM+ K +P T+ ML
Sbjct: 270 NRLSSYGFQPDTV----SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 322
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 87/192 (45%), Gaps = 4/192 (2%)
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A ++ ++ S PD + LI L + GR DA + ++ G +V YNT+++
Sbjct: 93 AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C + + A +L+ M PD TY P+++ C + R+ LL M
Sbjct: 153 GYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERI 533
TY L+ + +S A +EM +KG P TY ++ + + R+ +A+E +
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269
Query: 534 NKLLAHAKEQKT 545
N+L ++ + T
Sbjct: 270 NRLSSYGFQPDT 281
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 180/375 (48%), Gaps = 37/375 (9%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK-VFLE 257
T + ++R L G +A+ R M+ G + + L+ + V+ A + V +
Sbjct: 152 TYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM 211
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ + FN +++G CK K++DA+K EM ++G +PD VSY + YC+
Sbjct: 212 LDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCS 271
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS------------- 364
+ EM +KG P V+T+T ++H + KA + A+ + +M+
Sbjct: 272 HEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTAL 331
Query: 365 ----------DDCL------------PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
DD L P Y++LI GR+ +A E+ +M+ +G+
Sbjct: 332 IDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGL 391
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+V+TY+T+IS+ C + +A +L Q+M E PD TY+ L+++ C +KR+ +
Sbjct: 392 KPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHV 451
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L +M K + D TY SL+ G + G +E A S ++M+ G++P TY +L L
Sbjct: 452 LFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLS 511
Query: 523 KK-RLGNAKERINKL 536
K R A++ + KL
Sbjct: 512 KSARAMEAQQLLFKL 526
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 189/428 (44%), Gaps = 57/428 (13%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS--TIMRRLVRGGRYDDAVEAFR 221
+N+MV+ + K+ K M + K DE+ ++ +S T++ + G +A+ F
Sbjct: 223 FNSMVNGMCKAGK---MEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFA 279
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTR 280
M + G+ D + L+ + K ++E A + + ++ + ++ F LI G+CK
Sbjct: 280 EMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKG 339
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+DDA A++ M Q P VV Y I YC + + L EM+ KG KP V+TY+
Sbjct: 340 FLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYS 399
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ A K + A ++ ++M LPD YSSLI +L + R+ DA+ +F++M K
Sbjct: 400 TIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKL 459
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL------------- 447
G+ P+ TY ++I C E AL L KM + PD TY+ L
Sbjct: 460 GLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEA 519
Query: 448 ---------------------LKMCCRKKRMKVLNFLL----------------THMFKN 470
L CCRK +K + LL M
Sbjct: 520 QQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDR 579
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH-STYKMLEEKLEKKRLGNA 529
+ ++D Y+ L+ G +G + A SF ++M+ +G P ST ++ E + A
Sbjct: 580 NWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEA 639
Query: 530 KERINKLL 537
+ I +LL
Sbjct: 640 DQVIQQLL 647
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 175/394 (44%), Gaps = 56/394 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT+V G K C L + G + + T ++++ + + G + AV R
Sbjct: 258 YNTLVG--GYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQ 315
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
M++ G++ + + L+D K ++ A + C I S +N LI+G+C +
Sbjct: 316 MRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGR 375
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A++ + EM +G PDVV+Y+ I YC+ D + ++M EKG P ITY+
Sbjct: 376 MDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSS 435
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L + K++++A +++ M PD Y+SLI K G V+ A + + M K G
Sbjct: 436 LIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAG 495
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V+P+V+TY+ +I+ + A +LL K+ + P Y L+ CCRK +K +
Sbjct: 496 VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMH-CCRKAELKSVL 554
Query: 462 FLL----------------THMFKNDVSMDAGTYA------------------------- 480
LL M + ++D Y+
Sbjct: 555 ALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQR 614
Query: 481 ----------SLVRGLIESGKLELACSFFEEMIS 504
SL+RGL E+G + A +++++
Sbjct: 615 GFAPNSTSTISLIRGLFENGMVVEADQVIQQLLN 648
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 110/209 (52%)
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A++ M G +P+V +Y I C ++ L++M+ GC P+V+TY ++
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 193
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
A +A +++ A ++ M P+ ++S++ + KAG+++DA ++F++M ++G+ P
Sbjct: 194 AFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAP 253
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+ ++YNT++ C AL + +M + PD T+ L+ + C+ ++ L+
Sbjct: 254 DGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLV 313
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLE 493
M + + M+ T+ +L+ G + G L+
Sbjct: 314 RQMRERGLQMNEVTFTALIDGFCKKGFLD 342
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 95/187 (50%), Gaps = 1/187 (0%)
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G PSV+ Y V+ AL A + A + ++ M SD P+ Y+ LI L G K+A
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
I DM+ G PNV+TYNT++++ E + A +L+ M + KP+ T+ ++
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ +M+ + M + ++ D +Y +LV G ++G A S F EM KGI+P
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289
Query: 511 HSTYKML 517
T+ L
Sbjct: 290 VVTFTSL 296
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 114/259 (44%), Gaps = 19/259 (7%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y++++ VL + K+ L K M +L T ++++ + G + A+ M
Sbjct: 433 YSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEF-TYTSLIDGHCKEGNVERALSLHDKM 491
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIH------- 274
K GV D SVL++ L K A ++ + ++ IP +++ ++ L+H
Sbjct: 492 VKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTK-YDALMHCCRKAEL 550
Query: 275 --------GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
G+C +++A K + M + ++ D Y+ I +CR + K K+
Sbjct: 551 KSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQ 610
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M ++G P+ + ++ L + + EA +V +++ + L D +LI + G
Sbjct: 611 MLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALIDLNLNEGN 670
Query: 387 VKDANEIFEDMKKQGVVPN 405
V ++ M K G++P+
Sbjct: 671 VDAVLDVLHGMAKDGLLPS 689
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 98/338 (28%), Positives = 170/338 (50%), Gaps = 5/338 (1%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KD 260
+M+ R + A E ++ M + G + D + +L+ L K ++ + K+ E +
Sbjct: 51 VMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRG 110
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P S Q ++ L+ K R+VD A EM + G PD + + I C+ +
Sbjct: 111 QTP-SMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDA 169
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+ K+M + GC+P+V Y +++H L + Q+ +A ++ +MKS C PD Y++L+
Sbjct: 170 SERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDA 229
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ KA RV++ ++FE M+ G VPNV+T++T+I C E E AL++ M E CKP+
Sbjct: 230 VCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPN 289
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ CR +++ L M + + DA Y SL+ G + G ++ A +
Sbjct: 290 KYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYR 349
Query: 501 EMI-SKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
EM G+ P T+ L + K +LG A E + ++
Sbjct: 350 EMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEM 387
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 111/391 (28%), Positives = 189/391 (48%), Gaps = 12/391 (3%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM-STIMRRLVRGGRYDD 215
TP M Y+++V L K+++ L EM + G+ M ++ L + G+ D
Sbjct: 111 QTPSMQAYSSLVRALAKARRVDHASSLFDEM--IRGGHHPDRLMFYELILGLCQAGKVKD 168
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILI 273
A E F+ M K+G + + +VL+ L +E A +F E K C P +N L+
Sbjct: 169 ASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSP-DVVTYNTLL 227
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
CK R+V++ K + M G+ P+V++++ I CR + K + M E GCK
Sbjct: 228 DAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 287
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ TYT ++ L +A+++ +A +++EKM PD Y+SLI K G + +A ++
Sbjct: 288 PNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 347
Query: 394 FEDMKK-QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ +M G+ P ++T+NT+I C + A +L+ +M D TY L+
Sbjct: 348 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLS 407
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
R ++ + M + +D + S V GL ++G ++ A + FE G VP
Sbjct: 408 RATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPE 467
Query: 513 TYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
T+++L E L K LG E KL+ AK +
Sbjct: 468 TFRILSESLIK--LGRV-EDAQKLMEPAKAR 495
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 130/284 (45%), Gaps = 35/284 (12%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
++ +I K K +++ K ++EM G +PDV ++ ++ + R + K + + M
Sbjct: 13 YSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMV 72
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK----- 383
E G KP ++Y I++H L K +++E+LK+ +M P YSSL+ L+K
Sbjct: 73 ESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVD 132
Query: 384 ------------------------------AGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
AG+VKDA+E F+ M K G PNV YN ++
Sbjct: 133 HASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLL 192
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C+ + E A L +M+ C PD TY LL C+ +R++ L M
Sbjct: 193 HGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYV 252
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ T+++L+ GL +G+LE A F M+ G P TY L
Sbjct: 253 PNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTL 296
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/280 (24%), Positives = 120/280 (42%), Gaps = 46/280 (16%)
Query: 164 YNTMVDVLGKSKKF---CLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEA 219
YNT++D + K+++ C ++E ++ GYV ++ T ST++ L R G + A+E
Sbjct: 223 YNTLLDAVCKARRVEEGCKLFEAMRAA-----GYVPNVITFSTLIHGLCRTGELEKALEV 277
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIP--------------- 263
F M + G + + + L+ L + V A ++F + + CIP
Sbjct: 278 FGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCK 337
Query: 264 -------------------LSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
L I FN LI G+CK K+ A + + EM +G + D
Sbjct: 338 RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSC 397
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+Y I R + + K+M+EK ++ + L K I++A V+E
Sbjct: 398 TYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEAT 457
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ +P+ + L L K GRV+DA ++ E K + +
Sbjct: 458 RKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDI 497
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/321 (29%), Positives = 162/321 (50%), Gaps = 2/321 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++R L GR ++AV M+ G + + L+ + ++ A +V
Sbjct: 12 TYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 71
Query: 259 KDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
++ + FN +++G CK +++ A+K EM ++G +PDVVSY + YC+
Sbjct: 72 REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGC 131
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ EM ++G P V+T+T ++HA KA + +A+ + +M+ + +++
Sbjct: 132 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 191
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI K G + DA E+M+K G+ P+V+ YN +I+ C + A +L+++ME
Sbjct: 192 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 251
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
KPD TY+ ++ C+ + L M K V DA TY+SL+RGL E +L AC
Sbjct: 252 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 311
Query: 497 SFFEEMISKGIVPYHSTYKML 517
FE M+ G+ P TY L
Sbjct: 312 ELFENMLQLGVQPDEFTYTTL 332
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 98/327 (29%), Positives = 169/327 (51%), Gaps = 2/327 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK-DTRALSVLMDTLVKGNSVEHAYKVFLE 257
T +T++ R G D A M++ G K + + +++ L K +E A KVF E
Sbjct: 47 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 106
Query: 258 F-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
++ + +N L+ G+CK + ++ EM Q+G PDVV++T I C+ +
Sbjct: 107 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 166
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + +M+E+G + + +T+T ++ K +++AL E+M+ P Y++
Sbjct: 167 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 226
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI K GR+ A E+ +M+ + V P+V+TY+T+IS C ++A +L QKM +
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY+ L++ C +KR+ L +M + V D TY +L+ G + G +E A
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK 523
S +EMI KG++P TY +L L K
Sbjct: 347 SLHDEMIRKGVLPDVVTYSVLINGLSK 373
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 118/461 (25%), Positives = 182/461 (39%), Gaps = 87/461 (18%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+V ++ + +V M E N +L T ++++ L + GR + A + F M
Sbjct: 48 YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 107
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSSQI--------- 268
+ G+ D + + L+ K + + VF E D + +S I
Sbjct: 108 VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL 167
Query: 269 ---------------------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
F LI G+CK +DDA A++EM + G P VV Y
Sbjct: 168 EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNAL 227
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I YC+ + ++EM+ K KP V+TY+ ++ K ++ A ++ +KM
Sbjct: 228 INGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 287
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
LPD YSSLI L + R+ DA E+FE+M + GV P+ TY T+I C E AL
Sbjct: 288 LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 347
Query: 428 LLQKMEEDLCKPDCETYAPL----------------------------------LKMCCR 453
L +M PD TY+ L L +CC
Sbjct: 348 LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 407
Query: 454 KKRMKVLNFLL----------------THMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
K K + LL M + +D Y+ L+ G G + A S
Sbjct: 408 KAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALS 467
Query: 498 FFEEMISKGIVPYH-STYKMLEEKLEKKRLGNAKERINKLL 537
F ++M+ G P ST ++ E+ + A I LL
Sbjct: 468 FHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 508
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 179/393 (45%), Gaps = 54/393 (13%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++ G K CL L + G V + T ++++ + G + AV
Sbjct: 119 YNTLLS--GYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQ 176
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
M++ G+ + + L+D K ++ A E + C I S +N LI+G+CK +
Sbjct: 177 MRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGR 236
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A++ ++EM + PDVV+Y+ I YC+ + ++M +KG P ITY+
Sbjct: 237 MDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSS 296
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L + K++N+A +++E M PD Y++LI K G V+ A + ++M ++G
Sbjct: 297 LIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKG 356
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKM-EED------------LC--KPDCETYAP 446
V+P+V+TY+ +I+ + + A +LL K+ ED LC K + ++
Sbjct: 357 VLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVA 416
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA-------------------------- 480
LLK C K MK + + M + +D Y+
Sbjct: 417 LLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG 476
Query: 481 ---------SLVRGLIESGKLELACSFFEEMIS 504
SLVRGL E G + A + +++++
Sbjct: 477 FSPNSTSTISLVRGLFEEGMVVEADNAIQDLLT 509
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 127/249 (51%), Gaps = 2/249 (0%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M + G +P+V +Y + C + + +M+ GC P+ +TY ++ A +A +
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 352 INEALKVYEKMKSD-DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++ A +V M+ + + P+ ++S++ L KAGR++ A ++F++M ++G+ P+V++YN
Sbjct: 61 LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
T++S C +L + +M + PD T+ L+ C+ ++ L+ M +
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNA 529
+ M+ T+ +L+ G + G L+ A EEM GI P Y L K R+ A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240
Query: 530 KERINKLLA 538
+E I ++ A
Sbjct: 241 RELIREMEA 249
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 91/176 (51%), Gaps = 4/176 (2%)
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P+ Y+ L+ L GR+++A + DM+ G PN +TYNT++++ C E + A ++
Sbjct: 8 PNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERV 67
Query: 429 LQKM-EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+ M EE KP+ T+ ++ C+ RM+ + M + ++ D +Y +L+ G
Sbjct: 68 VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYC 127
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
+ G L + + F EM +G+VP T+ L K GN ++ + L+A +E+
Sbjct: 128 KVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKA--GNLEQAV-ALVAQMRER 180
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/223 (20%), Positives = 89/223 (39%), Gaps = 16/223 (7%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ + G + A+ M + GV D SVL++ L K + A+++ +
Sbjct: 328 TYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKL 387
Query: 259 KDCIPLSSQI----------------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
P+ I L+ G+C + +A K + M + + D
Sbjct: 388 YHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGS 447
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
Y+ I +CR + RK K+M G P+ + ++ L + + EA + +
Sbjct: 448 VYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 507
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
+ L D +LI + K G V ++ M + G++P+
Sbjct: 508 LTCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 550
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 200/395 (50%), Gaps = 21/395 (5%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMST 202
A FF WA Q GY H YN ++D+L KS ++ K++ L++G +L T
Sbjct: 10 AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDL--LHSGCSPNLVTFKI 67
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
++R + G+ A+E R + ++ V D + L+ L K + + A K+F E +
Sbjct: 68 LIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLF-ENMESS 126
Query: 263 PLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGF--SPDVVSYTCFIE-HYCREKDF 317
++ IF N +I G CK+ ++ A++ ++EM ++G +PD+V+Y I C++ D
Sbjct: 127 RVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDV 186
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + L M+ G P VITY ++HAL A ++ EA ++ + M C PD +++L
Sbjct: 187 EEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNTL 243
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ KAG + A E+ E+M ++ ++P+V+TY +++ C + + A LL+++
Sbjct: 244 LDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 303
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG---------TYASLVRGLIE 488
PD Y L+ C+ ++ + L+ M ++ + TY ++ GLI+
Sbjct: 304 IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIK 363
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
G + A S +++++G VP TY L + L K
Sbjct: 364 DGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCK 398
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 160/331 (48%), Gaps = 13/331 (3%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++I+ L GR VEA +K D + L+D K + A +V E
Sbjct: 207 TYNSIIHALCVAGR---VVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEM 263
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
++ I + IL++G C+ +V A ++E+ +QG+ PDV++YT ++ C+ +
Sbjct: 264 CRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEI 323
Query: 318 RKVDDTLKEMQEK---------GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+ +KEM + P + TY IV+ L K I++A+ + + + +
Sbjct: 324 EEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYV 383
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
PD Y++LI L KA RV++A ++ ++M G PN +T +++ C ++A L
Sbjct: 384 PDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSL 443
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+ +M P+ Y L+ C+ RM +L M V++D Y L+ +I
Sbjct: 444 VVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIH 503
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
G++ A + ++EM+++G +P ST K LEE
Sbjct: 504 GGRVAEAMAMYDEMVARGFLPDGSTSKTLEE 534
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 154/324 (47%), Gaps = 16/324 (4%)
Query: 209 RGGRYDDAVEAFR-GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-----CI 262
R R D A++ F ++ G + D + + L+D LVK H ++ +KD C
Sbjct: 3 RSSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSG---HQFRTGKVYKDLLHSGCS 59
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P + F ILI G CK + A + ++ + + +PDV + I ++ + +
Sbjct: 60 P-NLVTFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVK 118
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM--KSDDCLPDTSFYSSLIFI 380
+ M+ P + TY V+ L K+ + +A ++ E+M + PD Y++LI
Sbjct: 119 LFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINA 178
Query: 381 -LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+ K G V++A EI + MK G P+V+TYN++I + C A ++L+ M C P
Sbjct: 179 GICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CSP 235
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D T+ LL C+ + +L M + ++ D TY LV GL G++++A
Sbjct: 236 DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLL 295
Query: 500 EEMISKGIVPYHSTYKMLEEKLEK 523
EE++ +G +P Y L + L K
Sbjct: 296 EEIVRQGYIPDVIAYTSLVDGLCK 319
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 2/146 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY+ YNT++D L K+ + +L EM L + + T+ +++ L R GR DD
Sbjct: 381 GYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGC-FPNDVTLGSVVFGLCRVGRVDD 439
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIH 274
A M + + + L+D L K + ++ A V + + L + LI
Sbjct: 440 AWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIV 499
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPD 300
+V +A EM +GF PD
Sbjct: 500 SMIHGGRVAEAMAMYDEMVARGFLPD 525
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 198/423 (46%), Gaps = 38/423 (8%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV------------KEMDELN 191
A+ FF W +TQ G + + T+V++LG +++F E++ + EL
Sbjct: 2 AYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELA 61
Query: 192 NGYVSLATM----------------------STIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
GY S + ++++ V+ G A+ +R M + G+
Sbjct: 62 RGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLR 121
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQK 287
DT +VLM+ K V+ +K+F E ++ C P + ++ILI CK V+ A K
Sbjct: 122 PDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSP-NVITYSILIDAVCKCGGVEKALK 180
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+M +G P++ +YT I+ + K +EM +G + + Y ++H LG
Sbjct: 181 VFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLG 240
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
++ + + A K++ +M S PD ++SL++ L AGR +A IF++ + G +V
Sbjct: 241 RSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVN 300
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
YN +I + C + A ++ ++EED PD T+ L+ C+ R+ LL M
Sbjct: 301 LYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDM 360
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRL 526
+ + D Y +L+ GL +SG++E A EM S G P TY +++E + R+
Sbjct: 361 KRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRI 420
Query: 527 GNA 529
+A
Sbjct: 421 EDA 423
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 148/295 (50%), Gaps = 17/295 (5%)
Query: 164 YNTMVDVLGKS----KKFCLMWELVKEMDELNNGYVSLATM-STIMRRLVRGGRYDDAVE 218
Y +M+D LGKS K F L E+ E G V+ + ++++ L R GR D A +
Sbjct: 197 YTSMIDGLGKSGHVDKAFFLFEEMTSE------GLVATRVVYNSLIHGLGRSGRADAAAK 250
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWC 277
FR M G++ D + L+ L A ++F E +D L ++N+LI C
Sbjct: 251 LFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLC 310
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K++++D+A + E+ + G PDV ++ ++ C+ L +M+ GC P V
Sbjct: 311 KSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVT 370
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y ++ L K+ ++ EA ++ +M+S PD Y++LI K GR++DA +FE++
Sbjct: 371 VYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEI 430
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED----LCKPDCETYAPLL 448
+G N +TYNT+++ C + A KL M+++ + PD TY LL
Sbjct: 431 SAKG-FANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYTTLL 484
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 132/548 (24%), Positives = 232/548 (42%), Gaps = 116/548 (21%)
Query: 86 SRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAF 145
+R ++ +++IL + + L G +V+ + + L++ D A+
Sbjct: 2 ARAIARGFLRPTQDVAEILLGILKPGPYLCRDLAGYASTVTPEVAGRVLQQV-EDPDVAW 60
Query: 146 GFFTWAKTQTGYMHTPE-----------------------------------MYNTMVDV 170
FF WA + G+ H MY T+++
Sbjct: 61 TFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVING 120
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
K+ + +EL+ EM E + + ST+++ L R GR D+A+E F+ M +
Sbjct: 121 FCKAGQVDQAFELLDEMKE-RGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSP 178
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFK-------DCIPLSSQIFNILIHGWCKTRKVD 283
+ + +++ L K N ++ A ++F + + C P ++ +I CK ++VD
Sbjct: 179 NVITYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEP-DVISYSTVIDALCKAQRVD 237
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCR---------------EK-------DFRKVD 321
A + K M G +P+VV+Y+ I+ C+ EK DF +
Sbjct: 238 KAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAML 297
Query: 322 DTL--KEMQEKGC-----------KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
L + QEK C KP+V+TY + +H L KA +++EA ++ +M
Sbjct: 298 HALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVT 357
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIF---------------------------------- 394
PD YSS+I KAGR+ A+++F
Sbjct: 358 PDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRV 417
Query: 395 -EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
EDM G +P + TYN ++ C E+AL++ KM+ +PDC TYAPL++ CR
Sbjct: 418 HEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCR 477
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+R+ L M ++V + +LV L + G+++ ACS + ++ G P T
Sbjct: 478 ARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGET 537
Query: 514 YKMLEEKL 521
+K+L E+L
Sbjct: 538 FKILVEEL 545
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 174/387 (44%), Gaps = 40/387 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+T++D L K+++ +E K M + ++ T S+++ L + R + +E M
Sbjct: 223 YSTVIDALCKAQRVDKAYEYFKRMRAVGCA-PNVVTYSSLIDGLCKVDRPSECLELLLHM 281
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
K+ G + + ++ L K + E A + F K + +N+ +HG CK +V
Sbjct: 282 KEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRV 341
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D+A + + EM + +PDV++Y+ I+ +C+ K DD M C P +T+ +
Sbjct: 342 DEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTL 401
Query: 343 MHALGKAKQ-----------------------------------INEALKVYEKMKSDDC 367
+H + K+ + AL++Y KMK
Sbjct: 402 LHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKR 461
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
PD + Y+ LI L +A RV +A E + M+ VVPN + ++ C + E + A
Sbjct: 462 QPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACS 521
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+L + E C+P ET+ L++ +K+ + + LL DA TY+ V +
Sbjct: 522 VLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLR---SPGFVADAATYSLCVAEIC 578
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTY 514
++GK + A E+M+ KG+ P TY
Sbjct: 579 KAGKPDEAVEVIEQMVLKGVRPDEGTY 605
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 112/244 (45%), Gaps = 17/244 (6%)
Query: 218 EAFR---GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSSQI 268
EAFR M G + +VLMD + +SVE A +++ + K DC
Sbjct: 413 EAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDC-----NT 467
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ LI C+ R+VD+A++ + M P+ +E C++ + + L +
Sbjct: 468 YAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVV 527
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E GC+P T+ I++ L K+ A K+ ++S + D + YS + + KAG+
Sbjct: 528 EVGCQPLGETFKILVEELYLRKKWEAASKL---LRSPGFVADAATYSLCVAEICKAGKPD 584
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A E+ E M +GV P+ TY ++ S C E+A+ +KM C P TY L+
Sbjct: 585 EAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLI 644
Query: 449 KMCC 452
C
Sbjct: 645 GEAC 648
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 9/249 (3%)
Query: 188 DELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
D +N G++ L T + +M + + A+E + MK+ + D + L+ L +
Sbjct: 420 DMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRAR 479
Query: 247 SVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
V+ A + +E + +P + I + L+ CK +VD+A + + + G P ++
Sbjct: 480 RVDEAKEFLDVMEADNVVP-NGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETF 538
Query: 305 TCFIEH-YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
+E Y R +K + K ++ G TY++ + + KA + +EA++V E+M
Sbjct: 539 KILVEELYLR----KKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMV 594
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
PD Y +++ L RV+ A FE M +G P ++TY +I AC+ +
Sbjct: 595 LKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMAD 654
Query: 424 NALKLLQKM 432
A ++ + M
Sbjct: 655 EAFRIFEAM 663
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 113/225 (50%), Gaps = 13/225 (5%)
Query: 328 QEKGCKP----SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
Q G KP + T ++++A KAK+ EA ++ ++ C P+ Y+++I K
Sbjct: 64 QWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCK 123
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
AG+V A E+ ++MK++GV +VL ++T+I C + + AL+ + M E+ C P+ T
Sbjct: 124 AGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVIT 182
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFK-----NDVSMDAGTYASLVRGLIESGKLELACSF 498
Y ++ C+ R+ L M K + D +Y++++ L ++ +++ A +
Sbjct: 183 YNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEY 242
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
F+ M + G P TY L + L K + +LL H KE+
Sbjct: 243 FKRMRAVGCAPNVVTYSSLIDGLCKV---DRPSECLELLLHMKEK 284
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 117/282 (41%), Gaps = 9/282 (3%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
G++ + YN ++D + + E+ +M T + +++ L R R
Sbjct: 422 VNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKR-KKRQPDCNTYAPLIQCLCRARR 480
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFN 270
D+A E M+ V + L++ L K V+ A V + C PL + F
Sbjct: 481 VDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLG-ETFK 539
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
IL+ +K + A K ++ GF D +Y+ + C+ + + +++M K
Sbjct: 540 ILVEELYLRKKWEAASKLLR---SPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLK 596
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G +P TY V+ +L ++ A+ +EKM S C P Y+ LI A +A
Sbjct: 597 GVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEA 656
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
IFE M G P T T+ S+C R L + Q++
Sbjct: 657 FRIFEAMVAAGFTPQAQTMRTL--SSCLRDAGYQDLLVRQRI 696
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 199/400 (49%), Gaps = 15/400 (3%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKF----CLMWELVKEMDELNNGYV 195
D A F Q G+ H Y T++ L KSKKF ++ ++ E + + G
Sbjct: 72 DPQRALEIFNRVAEQRGFSHNNATYATILHKLAKSKKFQAIDAVLHQMTYETCKFHEG-- 129
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT-RALSVLMDTLVKGNSVEHAYKV 254
+M+ + ++ VE F ++ EK + +A+S ++ LV+ N V+ K
Sbjct: 130 ---IFLNLMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKF 186
Query: 255 FLEFKDCIPLSSQ--IFNILIHGWCKTRKVDDAQKAMKEMFQQGFS-PDVVSYTCFIEHY 311
L K + L IFNIL+ CK +D A + ++EM + S P++++Y+ I
Sbjct: 187 LLNSKKSLNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGL 246
Query: 312 CREKDFRKVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
C ++ + +EM K P +TY +++ ++++ ALK+ E MK + C P+
Sbjct: 247 CGSGRLKEAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPN 306
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
YS+L+ K GR+++A E+F++MK G+ P+ + Y T+I+ C + A++LL+
Sbjct: 307 VFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLK 366
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
M E+ C+ D T+ +L CR+ R + +L + V ++ +Y ++ L G
Sbjct: 367 DMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNSLCREG 426
Query: 491 KLELACSFFEEMISKGIVPYHSTY-KMLEEKLEKKRLGNA 529
+L+ A M+ +G++P+ +T ++L E ++G+A
Sbjct: 427 ELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDA 466
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 157/341 (46%), Gaps = 33/341 (9%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N +V K+ +E+V+EM + + Y +L T ST++ L GR +A+E F
Sbjct: 202 IFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEE 261
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
M V KD +L D L +N LI+G+C KV
Sbjct: 262 M----VSKD----QILPDALT-------------------------YNALINGFCHGEKV 288
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D A K M+ M + G +P+V +Y+ + +C+E + + EM+ G KP + YT +
Sbjct: 289 DRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTL 348
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ +A +++EA+++ + M+ + C DT ++ ++ L + GR ++A + E + +GV
Sbjct: 349 INFFCRAGRVDEAMELLKDMRENKCRADTVTFNVILGGLCREGRFEEARGMLERLPYEGV 408
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
N +Y +++S C E + A +L+ M P T LL C ++
Sbjct: 409 YLNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHLCEAGKVGDAVM 468
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
L + + + ++A LV + KL A ++++
Sbjct: 469 ALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDLV 509
>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 733
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 195/409 (47%), Gaps = 6/409 (1%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
+ D A FF WA Q Y H P +Y M+++L K+ K C + V +
Sbjct: 109 QLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKT-KLCQGAKRVLRLMAKRRIER 167
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+M R G+ +A+ M+K G+E D + + LV GN ++ A + F
Sbjct: 168 RPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR-F 226
Query: 256 LEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
LE + + + +N LI G+C +++DA + + EM +G SPD +SY + C+
Sbjct: 227 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 286
Query: 314 EKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
EK ++V +++M ++ P +TY +H L K +EAL+ + + D
Sbjct: 287 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 346
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
YS+++ + GR+ A EI +M +G +P+V+TY ++I+ C + + A K+L++M
Sbjct: 347 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 406
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ CKP+ +Y LL C+ ++ ++ +A TY+ L+ G GK
Sbjct: 407 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 466
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHA 540
AC EMI KG P +L + L +++++ AK + + L +
Sbjct: 467 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 131/247 (53%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
++ ++H +C+ ++D A++ + EMF +G PDVV+YT I C+E+ + L++M
Sbjct: 348 YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMY 407
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+ GCKP+ ++YT +++ L K EA ++ + D +P+ YS L+ + G+
Sbjct: 408 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSS 467
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A ++ +M K+G P + N +I S C + + A + +++ + C + + ++
Sbjct: 468 EACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVI 527
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+K ++ LL M+ ++ D TY +++ L + G++E A +M+ G++
Sbjct: 528 HGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLI 587
Query: 509 PYHSTYK 515
P TY+
Sbjct: 588 PTPVTYR 594
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 184/362 (50%), Gaps = 17/362 (4%)
Query: 182 ELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
E+V EM + G + + T ++++ L + + D A + R M K+G + +T + + L++
Sbjct: 366 EIVNEM--FSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLN 423
Query: 241 TLVK-GNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L K GNS+E + + +D ++ +++L+HG+ + K +A ++EM ++GF P
Sbjct: 424 GLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFP 483
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQE---KGCKPSVITYTIVMHALGKAKQINEAL 356
V I+ C+E+ KVD+ + M++ GC +V+ +T V+H + + AL
Sbjct: 484 TPVEINLLIQSLCQEE---KVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 540
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ + M + PD Y+++I L K GR+++A ++ M + G++P +TY T+I
Sbjct: 541 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYRTVIHQY 600
Query: 417 CARSEEENALKLLQKMEEDLCKPDCET-YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C E+ LKLL+KM L + +C T Y +++ C ++ LL + + +D
Sbjct: 601 CRMGRVEDLLKLLEKM---LSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKID 657
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
A T L+ + G ++ + M ++ ++P K+ E+ +K L E +K
Sbjct: 658 ANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIP---DLKLCEKVSKKLMLEGKSEEADK 714
Query: 536 LL 537
L+
Sbjct: 715 LI 716
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 160/344 (46%), Gaps = 3/344 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ L K K+ + L+++M + +N T +T + L + G D+A+E R
Sbjct: 277 YYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREA 336
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
++ D S ++ + + ++ A ++ E K CIP + +I+G C+ RK
Sbjct: 337 EERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIP-DVVTYTSVINGLCQERK 395
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD A+K +++M++ G P+ VSYT + C+ + + + + +E P+ ITY++
Sbjct: 396 VDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSV 455
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+MH + + +EA + +M P + LI L + +V +A E G
Sbjct: 456 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
NV+ + T+I C + + E AL LL M PD TY ++ +K R++
Sbjct: 516 CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEAT 575
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L M + + TY +++ G++E E+M+S+
Sbjct: 576 KLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 619
>gi|449436631|ref|XP_004136096.1| PREDICTED: uncharacterized protein LOC101205322 [Cucumis sativus]
Length = 1559
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/372 (27%), Positives = 191/372 (51%), Gaps = 8/372 (2%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
L ++ FF W +++ + HT E YN M+D+LGK +F L W L+ M + + AT
Sbjct: 612 LPRSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQSPSASPDHATF 671
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK- 259
+ +R +A+ A+ ++++ + +D + L+D L + V+ A ++
Sbjct: 672 RILFKRYALAHLVSEAIAAYERLREFKL-RDETSFCNLIDALCESRHVDEAQELCFGKNR 730
Query: 260 --DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
DC S++I N+++ GW K + +EM ++G D+ SY+ +++ C+
Sbjct: 731 KLDCDS-STKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKP 789
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
K KEM++KG K V+ Y V+HA+G ++ ++ A +V+ +MK C P+ +++
Sbjct: 790 WKAVKLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTV 849
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + + GR KDA+ + + M K+ PNV+TY+ S + + L L +M +
Sbjct: 850 IKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSL---EKPKEILVLFDRMIKYGV 906
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P +TY LL+ R ++ + + M + S + Y +L+ L+E G +++A
Sbjct: 907 HPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARK 966
Query: 498 FFEEMISKGIVP 509
+ EEM++KG+ P
Sbjct: 967 YDEEMVAKGLSP 978
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 100/237 (42%), Gaps = 33/237 (13%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-C 261
I+R ++ G + + + M K GV KD + S+ MD K A K++ E K
Sbjct: 744 ILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKG 803
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ L +N +IH + VD A + EM + G P+VV+ I+ +C F+
Sbjct: 804 MKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRFKDAH 863
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQI----------------------------- 352
L +M ++ C+P+VITY +L K K+I
Sbjct: 864 MMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVLFDRMIKYGVHPKMDTYVMLLRKFGRW 923
Query: 353 ---NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
V+ KM+ C P+ Y++LI L + G + A + E+M +G+ P +
Sbjct: 924 GFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGLSPKL 980
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/308 (27%), Positives = 158/308 (51%), Gaps = 10/308 (3%)
Query: 212 RYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
R D A+ F + + +G+ +D + L+D LVK A + + P + +N
Sbjct: 154 RPDLAIRLFLSLHRSHGIAQDLPLFNSLLDALVKSRRASKAASLVRALEQRFPPDAVTYN 213
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
L GWC+ + A +++M + G +P +Y ++ + R + D +M+ +
Sbjct: 214 TLADGWCRVKDTSRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRR 273
Query: 331 G-----CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
G CKP V++YT V+H LG A Q+++A KV+++M + C P T+ Y++LI + K G
Sbjct: 274 GSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKG 333
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
++DA +F+DM ++G +PNV+TY +I C + A+KLL +M+ + C+P+ +TY
Sbjct: 334 NLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYN 393
Query: 446 PLLKMCCRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE---LACSFFEE 501
L++ + + K L+ T + + TY ++ + + E +A E
Sbjct: 394 VLIRYSLEEGEIEKGLDLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAARMVVE 453
Query: 502 MISKGIVP 509
M+ +G +P
Sbjct: 454 MVDRGYLP 461
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 131/270 (48%), Gaps = 11/270 (4%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N+++D L KS++ LV+ +++ T +T+ R A++ R
Sbjct: 177 LFNSLLDALVKSRRASKAASLVRALEQ--RFPPDAVTYNTLADGWCRVKDTSRALDILRQ 234
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-------DCIPLSSQIFNILIHG 275
M + G+ ++++ + ++HA+ FL+ K +C P + ++HG
Sbjct: 235 MVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKP-DVVSYTTVLHG 293
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
++D A+K EM +G P +Y I+ C++ + +M KG P+
Sbjct: 294 LGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPN 353
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+TYT+++ L A ++ A+K+ ++MKS+ C P+ Y+ LI + G ++ ++FE
Sbjct: 354 VVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFE 413
Query: 396 DMKK-QGVVPNVLTYNTMISSACARSEEEN 424
M K + +PN TYN +IS+ R E+
Sbjct: 414 TMSKGEECLPNQDTYNIIISAMFVRKRAED 443
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 139/282 (49%), Gaps = 13/282 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+ D + K +++++M E + + AT + I++ R G+ A + F M
Sbjct: 212 YNTLADGWCRVKDTSRALDILRQMVE-SGIAPTKATYNIILKGFFRSGQLQHAWDFFLQM 270
Query: 224 KKYG-----VEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGW 276
K+ G + D + + ++ L ++ A KVF + + C P S+ +N LI
Sbjct: 271 KRRGSNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKP-STATYNALIQVT 329
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK ++DA +M ++G+ P+VV+YT I C + L M+ +GC+P+V
Sbjct: 330 CKKGNLEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNV 389
Query: 337 ITYTIVMHALGKAKQINEALKVYEKM-KSDDCLPDTSFYSSLI---FILSKAGRVKDANE 392
TY +++ + +I + L ++E M K ++CLP+ Y+ +I F+ +A + A
Sbjct: 390 QTYNVLIRYSLEEGEIEKGLDLFETMSKGEECLPNQDTYNIIISAMFVRKRAEDMAVAAR 449
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ +M +G +P +N +++ +E + +LL+ E+
Sbjct: 450 MVVEMVDRGYLPRKFMFNRVLNGLMLTGNQELSRELLRMQEK 491
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 127/301 (42%), Gaps = 44/301 (14%)
Query: 225 KYGVEKDTRALSVLMDTLVKGNS-VEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRK 281
++G+ R +L + + + A ++FL I +FN L+ K+R+
Sbjct: 131 RHGLAFTPRTFPILFERFAMSHRRPDLAIRLFLSLHRSHGIAQDLPLFNSLLDALVKSRR 190
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
A ++ + +Q F PD V+Y + +CR V DT
Sbjct: 191 ASKAASLVRAL-EQRFPPDAVTYNTLADGWCR------VKDT------------------ 225
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+ AL + +M P + Y+ ++ ++G+++ A + F MK++G
Sbjct: 226 -----------SRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRG 274
Query: 402 -----VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
P+V++Y T++ + + A K+ +M + CKP TY L+++ C+K
Sbjct: 275 SNDENCKPDVVSYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGN 334
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ + M + + TY L+RGL +GK+ A + M S+G P TY +
Sbjct: 335 LEDAVAVFDDMVRKGYIPNVVTYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNV 394
Query: 517 L 517
L
Sbjct: 395 L 395
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 83/176 (47%), Gaps = 8/176 (4%)
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+S D ++SL+ L K+ R A + ++ Q P+ +TYNT+ C +
Sbjct: 167 RSHGIAQDLPLFNSLLDALVKSRRASKAASLVRALE-QRFPPDAVTYNTLADGWCRVKDT 225
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK-VLNFLLTHMFKN----DVSMDAG 477
AL +L++M E P TY +LK R +++ +F L + + D
Sbjct: 226 SRALDILRQMVESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVV 285
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+Y +++ GL +G+L+ A F+EM +G P +TY L + KK GN ++ +
Sbjct: 286 SYTTVLHGLGVAGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKK--GNLEDAV 339
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/458 (24%), Positives = 209/458 (45%), Gaps = 30/458 (6%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
D+ + KI+ + + K+V +++ V + L D A FF WA +Q
Sbjct: 101 DIGSLRKIIQQDLWNDPKIVVLFDS---ALAPIWVSKILLGLREDPKLALKFFKWAGSQV 157
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM---DELNNGY-----------------V 195
G+ HT E Y +V ++ +++ + + VKE+ ++ G+
Sbjct: 158 GFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVS 217
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ V G ++A E F M+ + R+ + L+ L K + + K F
Sbjct: 218 GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF 277
Query: 256 LEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ I S +N++I CK ++++++ +M + G SPDVV+Y I+ Y +
Sbjct: 278 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV 337
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+V EM++ GC P +ITY +++ K +++ A + + +MK++ P+ Y
Sbjct: 338 GSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTY 397
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S+LI K G ++ A ++F DM++ G++PN TY ++I + C A KLL M +
Sbjct: 398 STLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ 457
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
K + TY LL C+ RM + M K+ +S + Y +LV G I++ ++E
Sbjct: 458 AGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMED 517
Query: 495 ACSFFEEMISKGIVPYHSTYKML------EEKLEKKRL 526
A ++M I P Y + + KLE+ +L
Sbjct: 518 AMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 555
Score = 139 bits (349), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 107/398 (26%), Positives = 187/398 (46%), Gaps = 10/398 (2%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE---LNNGYVSLATM 200
AF +F+ K G Y+T++D K +L +M L N + T
Sbjct: 378 AFEYFSEMKNN-GLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEF----TY 432
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FK 259
++++ + G +A + M + GV+ + + L+D L K + A +VF K
Sbjct: 433 TSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLK 492
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
D I + Q++ L+HG+ K +++DA K +K+M + PD++ Y I +C ++ +
Sbjct: 493 DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEE 552
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
L+EM+ +G + + T ++ A KA + ++AL +++M+ Y LI
Sbjct: 553 TKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLID 612
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L KAG V+ A + F M G+ PNV Y ++I C + E+A KL +M+ P
Sbjct: 613 GLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTP 672
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D + L+ + ++ L++ M + + D Y SLV G + G+L A FF
Sbjct: 673 DITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFF 732
Query: 500 EEMISKGIVPYHS-TYKMLEEKLEKKRLGNAKERINKL 536
EMI KGI+P +L E ++ +L A E N++
Sbjct: 733 NEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 770
Score = 139 bits (349), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 162/330 (49%), Gaps = 3/330 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T + ++ L + G +++ F M++ G+ D + L+D K S+E +F
Sbjct: 288 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 347
Query: 256 LEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E KD C+P +N LI+ +CK K+ A + EM G P+VV+Y+ I+ +C+
Sbjct: 348 NEMKDVGCVP-DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCK 406
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E + +M+ G P+ TYT ++ A KA + EA K+ M +
Sbjct: 407 EGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 466
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++L+ L KAGR+ +A E+F M K G+ PN Y ++ E+A+K+L++M
Sbjct: 467 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 526
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E KPD Y ++ C +++++ +L M +S + +++ ++GK
Sbjct: 527 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 586
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
A +FF+EM G+ TY +L + L K
Sbjct: 587 DALNFFQEMQDVGVEATIVTYCVLIDGLCK 616
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 91/212 (42%), Gaps = 1/212 (0%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
MK G+ + + ++D K A F E +D + + + +LI G CK
Sbjct: 560 MKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGI 619
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V+ A M G P+V YT I+ C+ EMQ +G P + +T
Sbjct: 620 VELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTA 679
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ K + EAL + +M D Y+SL+ S+ G + A + F +M ++G
Sbjct: 680 LIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 739
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKME 433
++P + ++ R + + A++L +ME
Sbjct: 740 ILPEEVLCICLLREYYKRGQLDEAIELKNEME 771
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 1/204 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+TI+ + G+ DA+ F+ M+ GVE VL+D L K VE A F
Sbjct: 573 TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLS 632
Query: 261 C-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ + ++ LI G CK ++ A+K EM +G +PD+ ++T I+ + + ++
Sbjct: 633 LGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 692
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ M E + + YT ++ + ++++A K + +M LP+ L+
Sbjct: 693 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 752
Query: 380 ILSKAGRVKDANEIFEDMKKQGVV 403
K G++ +A E+ +M++ G++
Sbjct: 753 EYYKRGQLDEAIELKNEMERMGLI 776
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/315 (19%), Positives = 128/315 (40%), Gaps = 43/315 (13%)
Query: 56 DSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKIL-----SKQYQS 110
D SP++ + G++++ R+ + +I ++ N + D+ I+ ++ +
Sbjct: 493 DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEE 552
Query: 111 PDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
++E +K G+S + P + T++D
Sbjct: 553 TKLILEEMKSRGISAN----------------------------------PVISTTIIDA 578
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
K+ K +EM ++ ++ T ++ L + G + AV+ F M G++
Sbjct: 579 YFKAGKSSDALNFFQEMQDVGVE-ATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQP 637
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKA 288
+ + L+D L K N +E A K+F E + C ++ I F LI G K + +A
Sbjct: 638 NVAVYTSLIDGLCKNNCIESAKKLFDEMQ-CRGMTPDITAFTALIDGNLKHGNLQEALVL 696
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+ M + D+ YT + + + + + EM EKG P + ++ K
Sbjct: 697 ISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYK 756
Query: 349 AKQINEALKVYEKMK 363
Q++EA+++ +M+
Sbjct: 757 RGQLDEAIELKNEME 771
>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
Length = 638
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 175/360 (48%), Gaps = 5/360 (1%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF WA + Y H Y ++ L +++ MW++++EM V+ +S ++R
Sbjct: 109 FFRWAAKRRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRM 168
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---CIP 263
L A+ F +K + +A + ++ L+ ++++ E C P
Sbjct: 169 LGNAKMVSKAIAIFYQIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFP 228
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ ++ LI +CK + D A + + EM + G P YT I + + D
Sbjct: 229 -DTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSL 287
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+EM+ + C+P V TYT ++ LGKA +I+EA + +M+ + C PDT +++I L K
Sbjct: 288 FEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGK 347
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC-ARSEEENALKLLQKMEEDLCKPDCE 442
AGR+ DA ++F++M +P+V+TYNT+I + ++S ++M+E P
Sbjct: 348 AGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSF 407
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY+ L+ C+ RM+ LL M + Y SL+ L ++ + +LAC F+E+
Sbjct: 408 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 467
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 163/328 (49%), Gaps = 4/328 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++R L + GR D+A F M++ G DT ++ +++ L K ++ A K+F E
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEM 361
Query: 259 KD--CIPLSSQIFNILIHGWCKTR-KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
CIP S +N +I +++ + + + M + G SP +Y+ I+ +C+
Sbjct: 362 GTLRCIP-SVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTN 420
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
K L+EM EKG P Y ++ ALGKAK+ + A ++++++K + Y+
Sbjct: 421 RMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 480
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I L KAGR+ DA +F++M K G P+V YN ++S + AL +++M+E
Sbjct: 481 VMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEH 540
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C PD +Y +L + +L++M ++ V D +Y +++ L +G E A
Sbjct: 541 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEA 600
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEK 523
EEM + G TY + E + K
Sbjct: 601 AKLMEEMNTLGFEYDLITYSSILEAIGK 628
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 35/230 (15%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ P Y +++D LGK+K++ L EL +E+ E N G S + +++ L + GR
Sbjct: 434 EKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKE-NCGSSSARVYAVMIKHLGKAGRL 492
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
DDA+ F M K G D A +N L+
Sbjct: 493 DDAINMFDEMNKLGCAPDVYA----------------------------------YNALM 518
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G +T +D+A M+ M + G PD+ SY + + + + L M++ +
Sbjct: 519 SGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVR 578
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
P V++Y V+ AL A EA K+ E+M + D YSS++ + K
Sbjct: 579 PDVVSYNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 92/197 (46%), Gaps = 1/197 (0%)
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD-CLPDTSFYSSLIFILSKA 384
+++ + C+P+ Y ++ L Q + ++Y +M ++ C PDT YS+LI K
Sbjct: 184 QIKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKL 243
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
GR A ++ +MK+ G+ P Y +I+ + AL L ++M C+PD TY
Sbjct: 244 GRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTY 303
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L++ + R+ M + D +++ L ++G+L+ A F+EM +
Sbjct: 304 TELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKAGRLDDAMKLFQEMGT 363
Query: 505 KGIVPYHSTYKMLEEKL 521
+P TY + + L
Sbjct: 364 LRCIPSVVTYNTIIKAL 380
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 87/209 (41%), Gaps = 37/209 (17%)
Query: 338 TYTIVMHALGKAKQINEALKVYEKM-KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TY ++ L +Q E K+ ++M ++ C+ + S ++ +L A V A IF
Sbjct: 125 TYMALIRCLEVVEQYGEMWKMIQEMVRNPICVVTPTELSEVVRMLGNAKMVSKAIAIFYQ 184
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME-EDLCKPDCETYAPLLKMCCRKK 455
+K + P YN+MI + +L +M E C PD TY+ L+ C+
Sbjct: 185 IKTRKCQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHCFPDTMTYSALISAFCKLG 244
Query: 456 R-------------------MKVLNFLLTHMFKND-----VSM-----------DAGTYA 480
R K+ L+T FK D +S+ D TY
Sbjct: 245 RRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLFEEMRHQYCRPDVFTYT 304
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVP 509
L+RGL ++G+++ A FF EM +G P
Sbjct: 305 ELIRGLGKAGRIDEAYHFFYEMQREGCRP 333
>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
Length = 668
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 181/377 (48%), Gaps = 11/377 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+V + L+ M + Y T + ++R L GR DA+ M
Sbjct: 113 YNTLVAGYCRYGHLDAARRLIGSMPVAPDAY----TYTPLIRVLCDRGRVADALSLLDDM 168
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ G + + +VL++ + K + E A V E K C P + +N++I+G C+ +
Sbjct: 169 LRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTP-NIVTYNVIINGMCREGR 227
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VDDA+ + +F G PD VSYT ++ C K + V++ EM EK C P+ +T+ +
Sbjct: 228 VDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDM 287
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + + A++V ++M +C +T+ + +I + K GRV DA + +M G
Sbjct: 288 LIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYG 347
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+ ++Y T++ C +A +LL++M + C P+ T+ + + C+K ++
Sbjct: 348 CNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAI 407
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ M ++ ++ TY +LV G G ++ A F M K P TY L L
Sbjct: 408 MLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGL 464
Query: 522 -EKKRLGNAKERINKLL 537
+RL A E + ++L
Sbjct: 465 CNAERLDAAAELVAEML 481
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 188/399 (47%), Gaps = 40/399 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ L SK++ + EL EM E N + T ++R RGG + A++ + M
Sbjct: 250 YTTLLKGLCASKRWDDVEELFAEMME-KNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQM 308
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
++ +T +++++++ K V+ A+K + C P + + ++ G C+ +
Sbjct: 309 TEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNP-DTISYTTVLKGLCRAER 367
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC--------- 332
+DA++ +KEM + P+ V++ FI C++ + +++MQE GC
Sbjct: 368 WNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNA 427
Query: 333 -----------------------KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
KP+ ITYT ++ L A++++ A ++ +M DC P
Sbjct: 428 LVNGFCVQGHIDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPP 487
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ ++ L+ + G + +A E+ E M + G PN++TYNT+ E+AL+LL
Sbjct: 488 NVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELL 547
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM--DAGTYASLVRGLI 487
+ PD T++ ++ + ++ R++ + D+ M A Y ++ GL
Sbjct: 548 HGLVSKGVSPDVITFSSIIGILSKEDRVE--EAIQMFHLAQDIGMRPKALVYNKILLGLC 605
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
+ +++ A F M+S G +P STY +L E L ++ L
Sbjct: 606 KRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGL 644
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 158/327 (48%), Gaps = 5/327 (1%)
Query: 148 FTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMR 205
F + Y P+ Y T++ L +++++ EL+KEM NN + T +T +
Sbjct: 337 FKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVR-NNCPPNEVTFNTFIC 395
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS 265
L + G + A+ M+++G + L++ ++ A ++F C P +
Sbjct: 396 ILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP-CKP-N 453
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+ + L+ G C ++D A + + EM + P+VV++ + +C++ + + ++
Sbjct: 454 TITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVE 513
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
+M E GC P++ITY + + K +AL++ + S PD +SS+I ILSK
Sbjct: 514 QMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKED 573
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
RV++A ++F + G+ P L YN ++ C R E +NA+ L M + C P+ TY
Sbjct: 574 RVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYI 633
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDV 472
L++ R+ +K LL+ + V
Sbjct: 634 ILIEGLAREGLLKEAQDLLSMLCSRGV 660
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 146/310 (47%), Gaps = 6/310 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+T+++ L R R++DA E + M + + + + L + +E A + + ++
Sbjct: 356 TTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQE 415
Query: 261 --CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
C + +N L++G+C +D A + + M P+ ++YT + C +
Sbjct: 416 HGCT-VGVVTYNALVNGFCVQGHIDSALELFRSM---PCKPNTITYTTLLTGLCNAERLD 471
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + EM + C P+V+T+ ++++ + ++EA+++ E+M C P+ Y++L
Sbjct: 472 AAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLF 531
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
++K +DA E+ + +GV P+V+T++++I E A+++ ++ +
Sbjct: 532 DGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMR 591
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P Y +L C++ + L +M N + TY L+ GL G L+ A
Sbjct: 592 PKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDL 651
Query: 499 FEEMISKGIV 508
+ S+G+V
Sbjct: 652 LSMLCSRGVV 661
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 3/224 (1%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
+ G +PDV T I + CR L+ + G V Y ++ + ++
Sbjct: 68 RDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 127
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
A ++ M PD Y+ LI +L GRV DA + +DM ++G PNV+TY ++
Sbjct: 128 AARRLIGSMPV---APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 184
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ C S E A+ +L +M C P+ TY ++ CR+ R+ LL +F
Sbjct: 185 EAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQ 244
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
D +Y +L++GL S + + F EM+ K +P T+ ML
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDML 288
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 4/178 (2%)
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
PD + LI L + GR DA + + G +V YNT+++ C + A +L
Sbjct: 73 PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 132
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+ M PD TY PL+++ C + R+ LL M + + TY L+ + +
Sbjct: 133 IGSMP---VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK 189
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAKEQKT 545
+ E A + +EM +KG P TY ++ + + R+ +A++ +N+L ++ + T
Sbjct: 190 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDT 247
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ G P+V +I + C R +A ++L+ E D Y L+ CR +
Sbjct: 68 RDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLD 127
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
L+ M V+ DA TY L+R L + G++ A S ++M+ +G P TY +L
Sbjct: 128 AARRLIGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 184
Query: 519 EKLEKK 524
E + K
Sbjct: 185 EAMCKN 190
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 175/345 (50%), Gaps = 3/345 (0%)
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
++EM + + T +T++ L + G A+E M + G + D + ++ L
Sbjct: 281 FIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 340
Query: 243 VKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
K V+ A + + +DC P ++ +N LI CK +V++A + + + +G PD
Sbjct: 341 CKLGEVKEAVEFLDQMITRDCSP-NTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 399
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
V ++ I+ C ++ R + +EM+ KGC+P TY +++ +L +++EAL + +
Sbjct: 400 VCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLK 459
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+M+ C Y++LI KA ++++A EIF++M+ GV N +TYNT+I C
Sbjct: 460 QMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSR 519
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
E+A +L+ +M + KPD TY LL CR +K ++ M N D TY
Sbjct: 520 RVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYG 579
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+L+ GL ++G++E+A + KGI Y + + L +KR
Sbjct: 580 TLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKR 624
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 113/411 (27%), Positives = 199/411 (48%), Gaps = 9/411 (2%)
Query: 113 KVVEALKGCGVSVSNSLVEQTLRRFSND--LTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
++ E + G S SN V + F + + A F Q G+ +NT+V+
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K+ E++ M L GY + T ++++ L + G +AVE M
Sbjct: 305 LCKAGHVKHAIEIMDVM--LQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCS 362
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
+T + L+ TL K N VE A ++ L K +P FN LI G C TR A +
Sbjct: 363 PNTVTYNTLISTLCKENQVEEATELARVLTSKGILP-DVCTFNSLIQGLCLTRNHRVAME 421
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+EM +G PD +Y I+ C + + + LK+M+ GC SVITY ++
Sbjct: 422 LFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFC 481
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
KA +I EA +++++M+ ++ Y++LI L K+ RV+DA+++ + M +G P+
Sbjct: 482 KANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKF 541
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
TYN++++ C + + A ++Q M + C+PD TY L+ C+ R++V + LL +
Sbjct: 542 TYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSI 601
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG-IVPYHSTYKML 517
+++ Y +++GL K A + F EM+ + P +Y+++
Sbjct: 602 QMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIV 652
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 142/322 (44%), Gaps = 3/322 (0%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
I+ RL R G +DD + MK G E T +L+++ + + V D
Sbjct: 89 ILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGVVHWMIDDF 148
Query: 263 PL--SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
L + +N +++ + + A +M G PDV ++ I+ CR R
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
L++M G P T+T +M + ++ AL++ E+M C + ++
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHG 268
Query: 381 LSKAGRVKDANEIFEDMKKQ-GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
K GRV+DA ++M Q G P+ T+NT+++ C ++A++++ M ++ P
Sbjct: 269 FCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDP 328
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY ++ C+ +K L M D S + TY +L+ L + ++E A
Sbjct: 329 DVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELA 388
Query: 500 EEMISKGIVPYHSTYKMLEEKL 521
+ SKGI+P T+ L + L
Sbjct: 389 RVLTSKGILPDVCTFNSLIQGL 410
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/373 (27%), Positives = 183/373 (49%), Gaps = 2/373 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N M++VL K K + + M+ L ++ T +T++ GR + A M
Sbjct: 239 FNIMINVLCKEGKLKKAKDFIGSMENLGV-KPNVVTYNTVIHGYCSRGRVEGARMVLDIM 297
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
K GVE D+ L+ + KG +E A + + K+ L + + +N LI G+C +
Sbjct: 298 KNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDL 357
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A EM ++ P V +Y I E + D +K+M + G P ITY I+
Sbjct: 358 VKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNIL 417
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ + +A ++++M S P Y+SLI++LSK R+K A+++FE + ++G
Sbjct: 418 INGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGA 477
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+++ +N +I CA + A LL++M++ PD TY L++ CR+ +++
Sbjct: 478 SPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARE 537
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
LL M + + D +Y +L+ G + G + A + +EM+S G P TY L + L
Sbjct: 538 LLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLC 597
Query: 523 KKRLGNAKERINK 535
K + G+ E + K
Sbjct: 598 KNQQGDLAEELLK 610
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 155/356 (43%), Gaps = 42/356 (11%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFN 270
R DDA E F MK+ GV + ++ +K N E + ++ E F+ I + FN
Sbjct: 181 RGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFN 240
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
I+I+ CK K+ A+ + M G P+VV+Y I YC L M+ +
Sbjct: 241 IMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNR 300
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKS-------------------------- 364
G +P TY ++ + K ++ EA + EKMK
Sbjct: 301 GVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDLVKA 360
Query: 365 ----DD-----CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
D+ LP S Y+ LI L G++ +A+ + +DM G+VP+ +TYN +I+
Sbjct: 361 FGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILING 420
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C + A L +M +P TY L+ + ++ RMK + L + + S D
Sbjct: 421 YCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPD 480
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML------EEKLEKKR 525
+ +L+ G +G L+ A + +EM + IVP TY L E K+E+ R
Sbjct: 481 LIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEAR 536
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/338 (22%), Positives = 150/338 (44%), Gaps = 45/338 (13%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM---DELNNGYV--SLATMSTIMRRLV 208
+ G + T YNT++D +C +LVK DE+ + +++T + ++ L
Sbjct: 334 EIGLLPTAVTYNTLID------GYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALF 387
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
G+ D+A + M G+ D S
Sbjct: 388 LEGKMDEADGMIKDMGDSGIVPD----------------------------------SIT 413
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+NILI+G+C+ A EM +G P +V+YT I + + DD +++
Sbjct: 414 YNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKII 473
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+G P +I + ++ ++ A + ++M + +PD Y++L+ + G+V+
Sbjct: 474 REGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVE 533
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A E+ ++MK++G+ P+ ++YNT+IS R + +A + +M P TY L+
Sbjct: 534 EARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALI 593
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+ C+ ++ + LL M ++ D TY SL+ G+
Sbjct: 594 QGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI 631
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 125/270 (46%), Gaps = 2/270 (0%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
SS +F++LI C+ ++ DDA + M ++G P + ++ + + + V
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLY 224
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
EM K +V T+ I+++ L K ++ +A M++ P+ Y+++I
Sbjct: 225 AEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
GRV+ A + + MK +GV P+ TY ++IS C + E A +L+KM+E P TY
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ C K + M + + TY L+ L GK++ A ++M
Sbjct: 345 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD 404
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
GIVP TY +L R GNAK+ N
Sbjct: 405 SGIVPDSITYNILINGY--CRCGNAKKAFN 432
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 127/277 (45%), Gaps = 5/277 (1%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
DL AFG+ + + T YN ++ L K ++K+M + +G V +
Sbjct: 355 GDLVKAFGYRD-EMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD--SGIVPDS 411
Query: 199 -TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T + ++ R G A M G++ + L+ L K N ++ A +F +
Sbjct: 412 ITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEK 471
Query: 258 F-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
++ +FN LI G C +D A +KEM ++ PD V+Y ++ CRE
Sbjct: 472 IIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGK 531
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + LKEM+ +G +P I+Y ++ K IN+A + ++M S P Y++
Sbjct: 532 VEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNA 591
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
LI L K + A E+ ++M +G+ P+ TY ++I
Sbjct: 592 LIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLI 628
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 99/199 (49%), Gaps = 6/199 (3%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T ++++ L + R A + F + + G D + L+D +++ A+ +
Sbjct: 445 TLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALL 504
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E ++ +P +N L+ G C+ KV++A++ +KEM ++G PD +SY I Y +
Sbjct: 505 KEMDKRNIVP-DEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSK 563
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D EM G P+++TY ++ L K +Q + A ++ ++M S PD S
Sbjct: 564 RGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDST 623
Query: 374 YSSLIFILSKAGRVKDANE 392
Y SLI G+V D++E
Sbjct: 624 YFSLI---EGIGKVDDSSE 639
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 35/193 (18%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
M+N ++D + + L+KEMD+ N T +T+M+ R G+ ++A E +
Sbjct: 483 MFNALIDGHCANGNLDRAFALLKEMDK-RNIVPDEVTYNTLMQGRCREGKVEEARELLKE 541
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
MK+ G+ D + +N LI G+ K +
Sbjct: 542 MKRRGIRPDHIS----------------------------------YNTLISGYSKRGDI 567
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+DA EM GF+P +++Y I+ C+ + ++ LKEM KG P TY +
Sbjct: 568 NDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSL 627
Query: 343 MHALGKAKQINEA 355
+ +GK +EA
Sbjct: 628 IEGIGKVDDSSEA 640
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 108/369 (29%), Positives = 179/369 (48%), Gaps = 5/369 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ K L +M E N+ + T + ++ + R D + + M
Sbjct: 274 YNTLINGFCKLGNMDEAVVLFNQMLE-NSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM 332
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDCIPLSSQIFNILIHGWCKTRK 281
KYG E + + LMD+LVK A+ + + +DC P S FN++I +CK +
Sbjct: 333 VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP-SHFTFNLMIDMFCKVGQ 391
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A + + M +G PD+ +Y I CR L+ M E GC P V+TY
Sbjct: 392 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 451
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L KA Q++EA +VYE +++ D S+LI L K+ R+ DA ++ +M++ G
Sbjct: 452 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 511
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+V+ Y +I C + + +L +M + C P TY+ ++ C+ R++
Sbjct: 512 SAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 571
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL M + V+ DA Y S++ GL +S + A ++ M G P TY +L +KL
Sbjct: 572 MLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKL 631
Query: 522 EK-KRLGNA 529
K RL A
Sbjct: 632 CKVSRLDEA 640
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 184/399 (46%), Gaps = 47/399 (11%)
Query: 164 YNTMVDVLGKSKK----FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
YN ++D K ++ L+ E+VK E N T +T+M LV+ G+Y DA
Sbjct: 309 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPN-----FITYNTLMDSLVKSGKYIDAFNL 363
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWC 277
+ M + + ++++D K ++ AY++F D C+P +NI+I G C
Sbjct: 364 AQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLP-DIYTYNIMISGAC 422
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF-------------------- 317
+ ++DDA++ ++ M + G PDVV+Y + C+
Sbjct: 423 RANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVV 482
Query: 318 ------------RKVDDT---LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
R++DD L+EM+ G P V+ YTI++H KA Q++++L + +M
Sbjct: 483 TCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEM 542
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
C+P YS +I L K+ RV+D + + M ++GV P+ + Y ++I C
Sbjct: 543 LDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSY 602
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+ A +L + M++ C P TY L+ C+ R+ LL M + D TY S+
Sbjct: 603 DEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSV 662
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
G +S + + A F+ M S+G P Y +L KL
Sbjct: 663 FDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKL 701
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 210/468 (44%), Gaps = 76/468 (16%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHT--------------------------- 160
S+V + L++ +DL A FF W Q GY H+
Sbjct: 100 SVVGRVLQQL-DDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNH 158
Query: 161 ------PE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL-ATMSTIMRRLVRGG 211
P+ Y+T+++ K++ F + L+ EM++ G V A +TI++ L G
Sbjct: 159 RCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK--RGIVPHNAVYNTIIKGLCDNG 216
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIP------ 263
R D A+ +R M++ ++L+D L K + A + + + C P
Sbjct: 217 RVDSALVHYRDMQR-NCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYN 275
Query: 264 -----------------LSSQI-----------FNILIHGWCKTRKVDDAQKAMKEMFQQ 295
L +Q+ +NILI G+CK + D K ++EM +
Sbjct: 276 TLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKY 335
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G P+ ++Y ++ + + + + M + CKPS T+ +++ K Q++ A
Sbjct: 336 GCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLA 395
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
++++ M CLPD Y+ +I +A R+ DA ++ E M + G P+V+TYN+++S
Sbjct: 396 YELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSG 455
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C S+ + A ++ + + D T + L+ C+ +R+ LL M +N + D
Sbjct: 456 LCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPD 515
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
Y L+ G ++ +L+ + +FF EM+ KG VP TY ++ +KL K
Sbjct: 516 VVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 563
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 151/285 (52%), Gaps = 6/285 (2%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGG 211
T+ G YN++V L K+ + +E+ + + N GY + + T ST++ L +
Sbjct: 438 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR--NGGYFLDVVTCSTLIDGLCKSR 495
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIF 269
R DDA + R M++ G D A ++L+ K + ++ + F E D C+P + +
Sbjct: 496 RLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVP-TVITY 554
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+I+I CK+ +V D +K M ++G +PD + YT I+ C+ + + + K M++
Sbjct: 555 SIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQ 614
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
GC P+V+TY +++ L K +++EA+ + E M+SD CLPDT Y+S+ K+
Sbjct: 615 TGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDK 674
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
A +F+ MK +G P Y+ +++ A + + A+++ ++ E
Sbjct: 675 AFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALE 719
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 145/306 (47%), Gaps = 2/306 (0%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
T G + YN M+ ++ + +L++ M E + T ++I+ L + +
Sbjct: 403 TDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCP-PDVVTYNSIVSGLCKASQ 461
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNI 271
D+A E + ++ G D S L+D L K ++ A K+ E ++ + I
Sbjct: 462 VDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LIHG+CK ++D + EM +G P V++Y+ I+ C+ R LK M E+G
Sbjct: 522 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 581
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P I YT V+ L K+ +EA ++Y+ MK C P Y+ L+ L K R+ +A
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAI 641
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ E M+ G +P+ +TYN++ +E + A +L Q M+ C P Y+ LL
Sbjct: 642 HLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKL 701
Query: 452 CRKKRM 457
+++M
Sbjct: 702 VAEEKM 707
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 180/377 (47%), Gaps = 11/377 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+V + + L+ M + Y T + I+R L GR +A+ M
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMPVAPDAY----TYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
G + +VL++ + K A +V E K C P + +N++I+G C+ +
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTP-NIVTYNVIINGMCREGR 230
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VDDA++ + + GF PD VSYT ++ C K + V++ EM EK C P+ +T+ +
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + + A++V E+M C +T+ + +I + K GRV DA + +M G
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+ ++Y T++ C E+A +LL++M C P+ T+ + + C+K ++
Sbjct: 351 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 410
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ M ++ ++ TY +LV G G+++ A F M K P TY L L
Sbjct: 411 MLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGL 467
Query: 522 -EKKRLGNAKERINKLL 537
+RL A E + ++L
Sbjct: 468 CNAERLDAAAELLAEML 484
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 171/387 (44%), Gaps = 40/387 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y +++ + KS F E++ EM ++ T + I+ + R GR DDA E +
Sbjct: 183 YTVLLEAVCKSTGFGQAMEVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 241
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIP------------------ 263
YG + DT + + ++ L E ++F E K+C+P
Sbjct: 242 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMV 301
Query: 264 ----------------LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
++ + NI+I+ CK +VDDA + + M G SPD +SYT
Sbjct: 302 ERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTV 361
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
++ CR + + + LKEM K C P+ +T+ + L + I +A + E+M C
Sbjct: 362 LKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGC 421
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
+ Y++L+ GRV A E+F M + PN +TY T+++ C + A +
Sbjct: 422 EVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAE 478
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
LL +M + C P+ T+ L+ C+K M L+ M ++ + + TY +L+ G+
Sbjct: 479 LLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGIT 538
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTY 514
E A ++S G+ P TY
Sbjct: 539 NDCNSEEALELLHGLVSNGVSPDIVTY 565
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 160/328 (48%), Gaps = 10/328 (3%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+ ++ + + GR DDA + M YG DT + + ++ L + E A ++ E
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K+C P + FN I C+ ++ A +++M + G ++V+Y + +C +
Sbjct: 384 KNCPP-NEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG--- 439
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+VD L+ CKP+ ITYT ++ L A++++ A ++ +M DC P+ ++ L+
Sbjct: 440 RVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLV 499
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ G + +A E+ E M + G PN++TYNT++ E AL+LL + +
Sbjct: 500 SFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVS 559
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM--DAGTYASLVRGLIESGKLELAC 496
PD TY+ ++ + R+ R++ + H+ + D+ M A Y ++ L + + A
Sbjct: 560 PDIVTYSSIIGVLSREDRVEEA-IKMFHIVQ-DLGMRPKAVIYNKILLALCKRCNTDGAI 617
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKK 524
FF M+S G +P TY L E L +
Sbjct: 618 DFFAYMVSNGCMPNELTYITLIEGLANE 645
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 185/399 (46%), Gaps = 15/399 (3%)
Query: 60 PDEDFVIPSLAGWVESHRLNEKSRISSRVLSEN---HETDVDKISKILSK--QYQSPDKV 114
PD L G + R + + + ++ +N +E D + + + + +V
Sbjct: 248 PDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQV 307
Query: 115 VEALKGCGVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGYMHTPEM--YNTMVDV 170
+E + G G + + +L + + AF F Y +P+ Y T++
Sbjct: 308 LEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFL---NNMGSYGCSPDTISYTTVLKG 364
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
L +++++ EL+KEM N + T +T + L + G + A M ++G E
Sbjct: 365 LCRAERWEDAKELLKEMVR-KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEV 423
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
+ + L++ V+ A ++F C P ++ + L+ G C ++D A + +
Sbjct: 424 NIVTYNALVNGFCVQGRVDSALELFYSMP-CKP-NTITYTTLLTGLCNAERLDAAAELLA 481
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
EM Q+ +P+VV++ + +C++ + + +++M E GC P++ITY ++ +
Sbjct: 482 EMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDC 541
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
EAL++ + S+ PD YSS+I +LS+ RV++A ++F ++ G+ P + YN
Sbjct: 542 NSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYN 601
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
++ + C R + A+ M + C P+ TY L++
Sbjct: 602 KILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIE 640
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 11/238 (4%)
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+A + + +G +PDV T I + CR L+ + G V Y ++
Sbjct: 61 EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ Q++ A ++ M PD Y+ +I L GRV +A + +DM +G
Sbjct: 121 AGYCRYGQLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 177
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM----KV 459
P+V+TY ++ + C + A+++L +M C P+ TY ++ CR+ R+ +
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LN L ++ F+ D +Y ++++GL + + E F EM+ K +P T+ ML
Sbjct: 238 LNRLSSYGFQPDTV----SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+ EA ++ ++ S PD + LI L + GR DA + ++ G +V YNT
Sbjct: 59 LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+++ C + + A +L+ M PD TY P+++ C + R+ LL M
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAK 530
TY L+ + +S A +EM +KG P TY ++ + + R+ +A+
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235
Query: 531 ERINKLLAHAKEQKT 545
E +N+L ++ + T
Sbjct: 236 EFLNRLSSYGFQPDT 250
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/377 (27%), Positives = 180/377 (47%), Gaps = 11/377 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+V + + L+ M + Y T + I+R L GR +A+ M
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASMPVAPDAY----TYTPIIRGLCDRGRVGEALSLLDDM 171
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
G + +VL++ + K A +V E K C P + +N++I+G C+ +
Sbjct: 172 LHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTP-NIVTYNVIINGMCREGR 230
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VDDA++ + + GF PD VSYT ++ C K + V++ EM EK C P+ +T+ +
Sbjct: 231 VDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDM 290
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + + A++V E+M C +T+ + +I + K GRV DA + +M G
Sbjct: 291 LVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYG 350
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+ ++Y T++ C E+A +LL++M C P+ T+ + + C+K ++
Sbjct: 351 CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQAT 410
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ M ++ ++ TY +LV G G+++ A F M K P TY L L
Sbjct: 411 MLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGL 467
Query: 522 -EKKRLGNAKERINKLL 537
+RL A E + ++L
Sbjct: 468 CNAERLDAAAELLAEML 484
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/365 (26%), Positives = 177/365 (48%), Gaps = 13/365 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y +++ + KS F E++ EM ++ T + I+ + R GR DDA E +
Sbjct: 183 YTVLLEAVCKSTGFGQAMEVLDEM-RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRL 241
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
YG + DT + + ++ L E ++F E K+C+P + F++L+ +C+
Sbjct: 242 SSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMP-NEVTFDMLVRFFCRGGM 300
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT---LKEMQEKGCKPSVIT 338
V+ A + +++M G + + I C++ +VDD L M GC P I+
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQG---RVDDAFQFLNNMGSYGCSPDTIS 357
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT V+ L +A++ +A ++ ++M +C P+ +++ I IL + G ++ A + E M
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ G N++TYN +++ C + ++AL+L M CKP+ TY LL C +R+
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLD 474
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
LL M + D + + T+ LV + G ++ A E+M+ G P TY L
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Query: 519 EKLEK 523
+ + K
Sbjct: 535 DGITK 539
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 121/518 (23%), Positives = 234/518 (45%), Gaps = 66/518 (12%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPD--KVVE 116
+PD P + G + R+ E + +L + V + +L +S + +E
Sbjct: 142 APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAME 201
Query: 117 AL-----KGC--GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEM--YNTM 167
L KGC + N ++ R D F + Y P+ Y T+
Sbjct: 202 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF-----LNRLSSYGFQPDTVSYTTV 256
Query: 168 VDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG 227
+ L +K++ + EL EM E N + T ++R RGG + A++ M +G
Sbjct: 257 LKGLCAAKRWEDVEELFAEMME-KNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHG 315
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDA 285
+T +++++T+ K V+ A++ + C P + + ++ G C+ + +DA
Sbjct: 316 CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP-DTISYTTVLKGLCRAERWEDA 374
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
++ +KEM ++ P+ V++ FI C++ + +++M E GC+ +++TY +++
Sbjct: 375 KELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNG 434
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
+++ AL+++ M C P+T Y++L+ L A R+ A E+ +M ++ PN
Sbjct: 435 FCVQGRVDSALELFYSMP---CKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPN 491
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL----KMCCRKKRMKVLN 461
V+T+N ++S C + + A++L+++M E C P+ TY LL K C ++ +++L+
Sbjct: 492 VVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLH 551
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA-------------------------- 495
L++ N VS D TY+S++ L ++E A
Sbjct: 552 GLVS----NGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLAL 607
Query: 496 ---CS------FFEEMISKGIVPYHSTYKMLEEKLEKK 524
C+ FF M+S G +P TY L E L +
Sbjct: 608 CKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANE 645
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/344 (21%), Positives = 150/344 (43%), Gaps = 39/344 (11%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+ ++ + + GR DDA + M YG DT + + ++ L + E A ++ E
Sbjct: 324 NIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVR 383
Query: 259 KDCIP-----------------------LSSQI-----------FNILIHGWCKTRKVDD 284
K+C P L Q+ +N L++G+C +VD
Sbjct: 384 KNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVD- 442
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A++ + P+ ++YT + C + + L EM +K C P+V+T+ +++
Sbjct: 443 --SALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVS 500
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
+ ++EA+++ E+M C P+ Y++L+ ++K ++A E+ + GV P
Sbjct: 501 FFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSP 560
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+++TY+++I E A+K+ +++ +P Y +L C++
Sbjct: 561 DIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFF 620
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+M N + TY +L+ GL L+ E+ S+G++
Sbjct: 621 AYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGVL 664
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 110/238 (46%), Gaps = 11/238 (4%)
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+A + + +G +PDV T I + CR L+ + G V Y ++
Sbjct: 61 EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 120
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ Q++ A ++ M PD Y+ +I L GRV +A + +DM +G
Sbjct: 121 AGYCRYGQLDAARRLIASMPV---APDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 177
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM----KV 459
P+V+TY ++ + C + A+++L +M C P+ TY ++ CR+ R+ +
Sbjct: 178 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 237
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LN L ++ F+ D +Y ++++GL + + E F EM+ K +P T+ ML
Sbjct: 238 LNRLSSYGFQPDTV----SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDML 291
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+ EA ++ ++ S PD + LI L + GR DA + ++ G +V YNT
Sbjct: 59 LAEAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNT 118
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+++ C + + A +L+ M PD TY P+++ C + R+ LL M
Sbjct: 119 LVAGYCRYGQLDAARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRG 175
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAK 530
TY L+ + +S A +EM +KG P TY ++ + + R+ +A+
Sbjct: 176 CQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAR 235
Query: 531 ERINKLLAHAKEQKT 545
E +N+L ++ + T
Sbjct: 236 EFLNRLSSYGFQPDT 250
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 185/372 (49%), Gaps = 5/372 (1%)
Query: 157 YMHTPEM---YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+MH P +N ++ + K+K++ ++ L +MD + T++ ++ R
Sbjct: 60 HMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIP-PDVYTLNILINSFCHLNRP 118
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNIL 272
A + K G++ DT + L+ L + A +F + + + + L
Sbjct: 119 GFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTL 178
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I+G CK + A + ++ M Q PDVV YT I+ C+++ + + +M +G
Sbjct: 179 INGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGI 238
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P + TYT ++H+L + + +M + +PD +S+++ L K G++ +A++
Sbjct: 239 SPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHD 298
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ + M +GV PNV+TYN ++ C +SE + A+K+ M + P+ +Y L+ C
Sbjct: 299 VVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYC 358
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ +RM +L M + ++ + TY +L+ GL G+L+ A + F EM++ G +P +
Sbjct: 359 KIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLA 418
Query: 513 TYKMLEEKLEKK 524
TY++L + L KK
Sbjct: 419 TYRILLDYLCKK 430
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 103/475 (21%), Positives = 205/475 (43%), Gaps = 41/475 (8%)
Query: 105 SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT-QTGYMHTPEM 163
+KQY + + + G+ + + F + P F F AK + G
Sbjct: 80 TKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTAT 139
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+ T++ L K L +M + G+ ++ T T++ L + G + A+ R
Sbjct: 140 FTTLIRGLCVEGKIGDALHLFDKM--IGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRS 197
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-------------------------LE 257
M++ + D + ++D+L K V A+ +F E
Sbjct: 198 MEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCE 257
Query: 258 FKDCIPLSSQ-----------IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
+K L +Q IF+ ++ CK K+ +A + M +G P+VV+Y
Sbjct: 258 WKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 317
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
++ +C + + + M G P+VI+Y +++ K +++++A ++E+M +
Sbjct: 318 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 377
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+P+T Y++L+ L GR++DA +F +M G +P++ TY ++ C +S + A+
Sbjct: 378 LIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAM 437
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
LL+ +E PD + Y ++ CR ++ + +++ + + TY ++ GL
Sbjct: 438 ALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGL 497
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEK-LEKKRLGNAKERINKLLAHA 540
G L+ A F EM G P TY + + L+ K A + + ++LA
Sbjct: 498 CRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 552
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 170/374 (45%), Gaps = 6/374 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
+Y +++D L K ++ + L +M + G + T ++++ L +
Sbjct: 209 VYTSIIDSLCKDRQVTEAFNLFSKM--VGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLN 266
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDCIPLSSQIFNILIHGWCKT 279
M + D S ++D L K + A+ V + + P + +N L+ G C
Sbjct: 267 QMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP-NVVTYNALMDGHCLQ 325
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++D+A K M G++P+V+SY I YC+ + K +EM +K P+ +TY
Sbjct: 326 SEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTY 385
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+MH L ++ +A+ ++ +M + +PD + Y L+ L K + +A + + ++
Sbjct: 386 NTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEG 445
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+ P++ Y +I C E E A + + +P+ TY ++ CR+ +
Sbjct: 446 SNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDE 505
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
N L M N S D TY ++ +GL+++ + A +EM+++G ST +L E
Sbjct: 506 ANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVE 565
Query: 520 KLEKKRLGNAKERI 533
L +L + ++I
Sbjct: 566 MLCDDKLDQSVKQI 579
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 120/262 (45%), Gaps = 1/262 (0%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA + M P V + + + K + V +M G P V T I
Sbjct: 48 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 107
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++ + A V K+ PDT+ +++LI L G++ DA +F+ M +G
Sbjct: 108 LINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 167
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PNV+TY T+I+ C A++LL+ ME+ C+PD Y ++ C+ +++
Sbjct: 168 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 227
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + M +S D TY SL+ L + + + +MI+ I+P + + + L
Sbjct: 228 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 287
Query: 522 EKK-RLGNAKERINKLLAHAKE 542
K+ ++ A + ++ ++ E
Sbjct: 288 CKEGKITEAHDVVDMMIIRGVE 309
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 14/275 (5%)
Query: 164 YNTMVDVLGKSKKFCL---MWELVKEMDEL-NNGYV-SLATMSTIMRRLVRGGRYDDAVE 218
YN ++D CL M E VK D + +NGY ++ + +T++ + R D A
Sbjct: 315 YNALMD------GHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATY 368
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGW 276
F M + + +T + LM L ++ A +F E IP + IL+
Sbjct: 369 LFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIP-DLATYRILLDYL 427
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK +D+A +K + PD+ YT I+ CR + D + KG +P+V
Sbjct: 428 CKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNV 487
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TYTI+++ L + ++EA K++ +M + C PD Y+++ L + A ++ ++
Sbjct: 488 RTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQE 547
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
M +G +V T ++ C +++ ++L +
Sbjct: 548 MLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 582
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 98/367 (26%), Positives = 183/367 (49%), Gaps = 4/367 (1%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
+ Y ++ L + K + L +M L G V + T + ++ L GGR+ A++ F
Sbjct: 381 QTYTALISGLSRLGKLEVAIGLYHKM--LKEGLVPNTVTYNALINELCVGGRFSTALKIF 438
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKT 279
M+ +G +T+ + ++ L G +E A +F + PL + + +N LI+G+
Sbjct: 439 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 498
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
V++A + + M + G PD +Y + + + +EM E G P+ ++Y
Sbjct: 499 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 558
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ K +++ AL + E+M+ C P+ Y+++I LSK R +A +I + M +
Sbjct: 559 TTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAE 618
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
QG++PNV+TY T+I C + A K+ ME+ C P+ TY+ L+ C++ +
Sbjct: 619 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 678
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
LL M + ++ D T+ SL+ G + G+++ A M+ G P + TY +L +
Sbjct: 679 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLK 738
Query: 520 KLEKKRL 526
L+K+ L
Sbjct: 739 GLQKECL 745
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 190/390 (48%), Gaps = 14/390 (3%)
Query: 131 EQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDEL 190
E+ +RR ++ L G G+ + NT++ L K + L K+M L
Sbjct: 183 EEEIRRVADFLNEISGM--------GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQM--L 232
Query: 191 NNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE 249
N+G SL T +T++ L + G+ +A + +Y + D + L+ + +++
Sbjct: 233 NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 292
Query: 250 HAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
A+ VF + + C P +S ++ LI+G C +VD+A ++EM ++G P V +YT
Sbjct: 293 LAFGVFDRMVKEGCDP-NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 351
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I C + + + + M+++GC+P+V TYT ++ L + ++ A+ +Y KM +
Sbjct: 352 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 411
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
+P+T Y++LI L GR A +IF M+ G + N TYN +I C + E A+
Sbjct: 412 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 471
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L +KM + P TY L+ K + LL M +N D TY LV G
Sbjct: 472 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 531
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ GKLE A +F+EM+ G+ P +Y L
Sbjct: 532 KWGKLESASFYFQEMVECGLNPNPVSYTTL 561
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 197/423 (46%), Gaps = 41/423 (9%)
Query: 146 GFFTWAKTQTGYMHTPEM-----------YNTMVDVLGKSKKFCLMWELVKEMDELNNGY 194
GF W K ++ + EM Y T++D K K + L++ M+E+
Sbjct: 529 GFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCN- 587
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
++ + + ++ L + R+ +A + M + G+ + + L+D L + + A+K+
Sbjct: 588 PNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 647
Query: 255 F--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
F +E + C+P + ++ LI+G C+ K D+A+ +KEM ++G +PD V++T I+ +
Sbjct: 648 FHDMEKRKCLP-NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV 706
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA----------------------K 350
L+ M + GCKP+ TY++++ L K K
Sbjct: 707 VLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEK 766
Query: 351 QINEAL--KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
+N + + +M C P YS+L+ L + GR +A ++ +DMK++G P+
Sbjct: 767 DVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREI 826
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y +++ + C E ++ALK+ +E + Y L+ C+ +++ L +M
Sbjct: 827 YYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNML 886
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGN 528
+ + + D + LV GL++ G+L+L M SK P TY +L +L R+G
Sbjct: 887 EKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGREL--SRIGK 944
Query: 529 AKE 531
+ E
Sbjct: 945 SIE 947
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 179/406 (44%), Gaps = 24/406 (5%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFC-------LMW----------- 181
D FF W + Y H + +M++ L + + F LM
Sbjct: 129 DTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRR 188
Query: 182 --ELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+ + E+ + G+ SL + +T++ +L + + A ++ M G++ + L+
Sbjct: 189 VADFLNEISGMGFGF-SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 247
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI--LIHGWCKTRKVDDAQKAMKEMFQQGF 297
+ L K V A + + LS +F LI G C+ R +D A M ++G
Sbjct: 248 NILSKKGKVREAELILSQIFQ-YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGC 306
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
P+ V+Y+ I C E + D L+EM EKG +P+V TYT+ + AL + EA++
Sbjct: 307 DPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIE 366
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ +MK C P+ Y++LI LS+ G+++ A ++ M K+G+VPN +TYN +I+ C
Sbjct: 367 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 426
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
ALK+ ME + +TY ++K C ++ L M K
Sbjct: 427 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 486
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
TY +L+ G + G + A + M G P TY L K
Sbjct: 487 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 532
Score = 47.0 bits (110), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 79/203 (38%), Gaps = 34/203 (16%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T ST++ L R GR+ +A + + MK+ G D
Sbjct: 788 TLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD------------------------ 823
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+I+ L+ CK +VD A K + +GF + Y I C+
Sbjct: 824 ----------REIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAG 873
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ M EK I +T+++ L K +++ +K+ M+S + P+ Y
Sbjct: 874 QVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYV 933
Query: 376 SLIFILSKAGRVKDANEIFEDMK 398
L LS+ G+ ++ + + +K
Sbjct: 934 ILGRELSRIGKSIESEPLADKLK 956
>gi|115480461|ref|NP_001063824.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|32526676|dbj|BAC79199.1| chloroplast RNA processing 1 -like protein [Oryza sativa Japonica
Group]
gi|113632057|dbj|BAF25738.1| Os09g0542800 [Oryza sativa Japonica Group]
gi|125606498|gb|EAZ45534.1| hypothetical protein OsJ_30195 [Oryza sativa Japonica Group]
gi|215768653|dbj|BAH00882.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 543
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 105/387 (27%), Positives = 179/387 (46%), Gaps = 5/387 (1%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
L A FF P +Y M+D+L K F L L+ EM E + +S +
Sbjct: 124 LPEAVAFFHHVLPSLPPDSLPALYAAMIDLLAKHHHFPLARHLLDEMRE-RSVPISAQLI 182
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGV-EKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
++RR VR +A + FR M++YG D L+ L+ L K A +F +K
Sbjct: 183 LALIRRYVRAEMPSEASDLFRRMEEYGAGAPDPATLASLLGALSKKRLASEAQAMFDSYK 242
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
++ L+H WC++ ++++A++ EM Q G +P+V +YT I+ R +
Sbjct: 243 SVFTPDVVLYTTLVHAWCRSGRLNEAERVFAEMQQAGVTPNVYTYTAVIDAMYRAGQVPR 302
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ L +M + GC P+ T+ +M A KA + + L+V+ +M+ C PD Y+ L+
Sbjct: 303 AQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCEPDIITYNFLME 362
Query: 380 ILSKAGR--VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
G+ + A ++ M +G +P+ T+N M+ A KL ++M+E C
Sbjct: 363 THCGKGQSNLDAAMKMLTRMIAKGCIPDCHTFNPMLKLVLVLGNVNAARKLYERMQELQC 422
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KP+ TY L+++ +K M ++ + M V + TYA+L+ G + A
Sbjct: 423 KPNVVTYNLLMRLFNLEKSMDMVLRIKKDMDAQGVEPNVNTYAALIEAFCGRGNWKRAHM 482
Query: 498 FFEEMI-SKGIVPYHSTYKMLEEKLEK 523
EM+ K + P Y M+ L K
Sbjct: 483 TLREMVEEKALKPTKPVYDMVLALLRK 509
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 112/250 (44%), Gaps = 44/250 (17%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGR 212
Q G Y ++D + ++ + EL+ +M +++G + AT + IMR V+ GR
Sbjct: 277 QAGVTPNVYTYTAVIDAMYRAGQVPRAQELLCQM--IDSGCPPNTATFNAIMRAHVKAGR 334
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGNS-VEHAYKVFLEF--KDCIPLSSQI 268
+ ++ M++ G E D + LM+T KG S ++ A K+ K CIP
Sbjct: 335 SEQVLQVHNQMRQLGCEPDIITYNFLMETHCGKGQSNLDAAMKMLTRMIAKGCIP-DCHT 393
Query: 269 FN-----ILIHG---------------WCKTRKVD--------DAQKAM-------KEMF 293
FN +L+ G CK V + +K+M K+M
Sbjct: 394 FNPMLKLVLVLGNVNAARKLYERMQELQCKPNVVTYNLLMRLFNLEKSMDMVLRIKKDMD 453
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQI 352
QG P+V +Y IE +C ++++ TL+EM +EK KP+ Y +V+ L KA Q+
Sbjct: 454 AQGVEPNVNTYAALIEAFCGRGNWKRAHMTLREMVEEKALKPTKPVYDMVLALLRKAGQL 513
Query: 353 NEALKVYEKM 362
++ E M
Sbjct: 514 RRHEELVEMM 523
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 196/433 (45%), Gaps = 60/433 (13%)
Query: 137 FSNDLTP--AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWEL----VKEMDEL 190
F+ +L P A FF W + G+ H + + +M+++L + + + +K D
Sbjct: 84 FALNLDPQTALAFFNWIGQKHGFKHNVQSHVSMLNILVPNGYLRIAENMRILMIKSTDSS 143
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
N L + ++ RR V+AF+ + R ++L+ L + ++
Sbjct: 144 ENALFVLEMLRSMNRR----------VDAFK------FKLTLRCYNMLLMLLSRFLMIDE 187
Query: 251 AYKVFLEFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
V+LE D + ++ IF N +++G+CK V +A+ + ++ Q G S D +YT I
Sbjct: 188 MKSVYLEMLDDM-VTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLI 246
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
YCR K+ + M KGC + ++YT ++H +A++++EALK++ +M D+C
Sbjct: 247 LGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCW 306
Query: 369 PDTSFYSSLIFILSKAGR-----------------------------------VKDANEI 393
P Y+ +IF L + GR DA +I
Sbjct: 307 PTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKI 366
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
M ++G++P+V+TYN +I C + +AL++L ME + C P+ TY L+ CR
Sbjct: 367 LNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCR 426
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
K + LL M + + + TY L+ G + G L A M G+VP T
Sbjct: 427 GKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWT 486
Query: 514 YKMLEEKLEKKRL 526
Y + + L K+ L
Sbjct: 487 YSVFIDTLCKRGL 499
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 172/349 (49%), Gaps = 6/349 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y ++ ++++ +L +M E +N + ++ T + I+ L + GR +A+ F+ M
Sbjct: 277 YTNLIHGFCEARRVDEALKLFSQMHE-DNCWPTVRTYTVIIFALCQLGRKTEALNMFKEM 335
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKTR 280
+ + + +VL+ +L + ++ + A K+ LE K IP S +N LI G+CK
Sbjct: 336 TEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLE-KGLIP-SVVTYNALIDGYCKKG 393
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
A + + M SP+ +Y I +CR K+ K L +M E+ +P+V+TY
Sbjct: 394 LSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYN 453
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I++H K + A K+ M +PD YS I L K G V++A +FE +K++
Sbjct: 454 ILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEK 513
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ N + Y+T+I C + + LL KM C P+ TY L+ C++K K
Sbjct: 514 GIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEA 573
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
L+ M K D+ A TY L+ L++ + + A F++M+S G P
Sbjct: 574 RLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHP 622
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 160/352 (45%), Gaps = 30/352 (8%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + ++ + G A + M + G+ D SV +DTL K VE A +F
Sbjct: 448 NVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLF 507
Query: 256 LEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
K+ I + I++ LI G+CK KV D + + +M G P+ ++Y I+ YC+E
Sbjct: 508 ESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKE 567
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
K+F++ + M ++ +P+ TYTI++ L K + ++A ++++M S PD Y
Sbjct: 568 KNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIY 627
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++ I GR+KDA + M +G++P+ + Y I + + A +L++M E
Sbjct: 628 TAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHE 687
Query: 435 DLCKPDCETYAPLLKM-----------------------------CCRKKRMKVLNFLLT 465
C+P TY+ L+K C R+ + L
Sbjct: 688 VGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFG 747
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M ++ + +A TY + GL + G LE+A F+ M KG P Y L
Sbjct: 748 KMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSL 799
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 177/383 (46%), Gaps = 18/383 (4%)
Query: 158 MHTPEMY--NTMVDVLGKSKKFCLMWELVKE---MDELNNGYVSLATMS--TIMRRLVRG 210
M TP ++ NTMV+ +C + +V+ + ++ +SL T + +++ R
Sbjct: 199 MVTPNIFTLNTMVN------GYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRN 252
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQI 268
D A F M G ++ + + L+ + V+ A K+F + +C P + +
Sbjct: 253 KNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWP-TVRT 311
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ ++I C+ + +A KEM ++ P+V +YT I C + +F L M
Sbjct: 312 YTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGML 371
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
EKG PSV+TY ++ K AL++ M+S++C P+ Y+ LI + +
Sbjct: 372 EKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIH 431
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
A + M ++ + PNV+TYN +I C + +A KLL M E PD TY+ +
Sbjct: 432 KAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFI 491
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C++ ++ L + + + + Y++L+ G + GK+ ++M+S G V
Sbjct: 492 DTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCV 551
Query: 509 PYHSTYKMLEEKLEKKRLGNAKE 531
P TY L + K++ N KE
Sbjct: 552 PNSITYNSLIDGYCKEK--NFKE 572
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 166/345 (48%), Gaps = 2/345 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T++T++ + G +A + + G+ DT + L+ + +V+ A +F
Sbjct: 203 NIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIF 262
Query: 256 LEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
L + L +++ + LIHG+C+ R+VD+A K +M + P V +YT I C+
Sbjct: 263 LSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQL 322
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + KEM EK C+P+V TYT+++ +L + ++A K+ M +P Y
Sbjct: 323 GRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTY 382
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI K G A EI M+ PN TYN +I C A+ LL KM E
Sbjct: 383 NALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLE 442
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+P+ TY L+ C++ + LL+ M ++ + D TY+ + L + G +E
Sbjct: 443 RKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEE 502
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLA 538
A S FE + KGI Y L + K ++ + + ++K+L+
Sbjct: 503 ARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLS 547
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 142/324 (43%), Gaps = 3/324 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + ++ L +DDA + GM + G+ + L+D K A ++
Sbjct: 343 NVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEIL 402
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+E +C P +++ +N LI G+C+ + + A + +M ++ P+VV+Y I C+
Sbjct: 403 SLMESNNCSP-NARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCK 461
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E D L M E G P TY++ + L K + EA ++E +K +
Sbjct: 462 EGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVI 521
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
YS+LI K G+V D + + M G VPN +TYN++I C + A L+ M
Sbjct: 522 YSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMI 581
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+ +P +TY L+ + + + M D Y + + G+L+
Sbjct: 582 KRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLK 641
Query: 494 LACSFFEEMISKGIVPYHSTYKML 517
A +M +KGI+P Y +
Sbjct: 642 DAEVLICKMNAKGIMPDTMLYTLF 665
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 144/340 (42%), Gaps = 10/340 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T + ++ + G A+E M+ + R + L+ +G ++ A +
Sbjct: 378 SVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLL 437
Query: 256 ---LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
LE K + + +NILIHG CK + A K + M + G PD +Y+ FI+ C
Sbjct: 438 HKMLERK--LQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLC 495
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ + + ++EKG K + + Y+ ++ K ++++ + +KM S C+P++
Sbjct: 496 KRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSI 555
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+SLI K K+A + + M K+ + P TY +I + E + A + +M
Sbjct: 556 TYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM 615
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
PD Y + C R+K L+ M + D Y + G +
Sbjct: 616 LSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSI 675
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKER 532
+ A + M G P + TY L K L NAK +
Sbjct: 676 DGAFGILKRMHEVGCEPSYYTYSCL-----IKHLSNAKPK 710
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/333 (23%), Positives = 139/333 (41%), Gaps = 36/333 (10%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ----IFNILIHGWCK 278
M K +E ++L+D L+K + + A+ +F + + S I+ IH +C
Sbjct: 580 MIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQM---LSTGSHPDVFIYTAFIHAYCS 636
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
++ DA+ + +M +G PD + YT FI+ Y R LK M E GC+PS T
Sbjct: 637 HGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYT 696
Query: 339 YTIVMHALGKAK-----------------------------QINEALKVYEKMKSDDCLP 369
Y+ ++ L AK L ++ KM C P
Sbjct: 697 YSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAP 756
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ + Y I L K G ++ A+ +F+ MK++G PN YN+++ +C A++ L
Sbjct: 757 NANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWL 816
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
M E+ P ++ LL + + + + + + D + L+ GL++
Sbjct: 817 DIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKK 876
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
G + F M ++G + TY ML E +
Sbjct: 877 GLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFD 909
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 164/325 (50%), Gaps = 6/325 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+T++R R G+ A + ++ G D +V++ K + +A V D
Sbjct: 141 TTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVL----D 196
Query: 261 CIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
+ +S + +N ++ C + K+ A + + M Q+ PDV++YT IE CR+
Sbjct: 197 RMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVG 256
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ L EM+++GC P V+TY ++++ + K +++EA+K M S C P+ ++ ++
Sbjct: 257 QAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ GR DA ++ DM ++G P+V+T+N +I+ C + A+ +L+KM + C+
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQ 376
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P+ +Y PLL C++K+M L M D TY +++ L + GK+E A
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEK 523
++ SKG P TY + + L K
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAK 461
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 177/366 (48%), Gaps = 11/366 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFR 221
YN M+ +C E+ + L+ VS + T +TI+R L G+ A+E
Sbjct: 175 YNVMI------SGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLD 228
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKT 279
M + D ++L++ + + V A K+ E +D C P +N+L++G CK
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTP-DVVTYNVLVNGICKE 287
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++D+A K + +M G P+V+++ + C + + L +M KG PSV+T+
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
I+++ L + + A+ + EKM C P++ Y+ L+ K ++ A E E M
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G P+++TYNTM+++ C + E+A+++L ++ C P TY ++ + +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
LL M D+ D TY+SLV GL GK++ A FF E G+ P T+ +
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIML 527
Query: 520 KLEKKR 525
L K R
Sbjct: 528 GLCKTR 533
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 159/296 (53%), Gaps = 10/296 (3%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDD 215
TP++ YN +V+ + K + + E +K ++++ + ++ T + I+R + GR+ D
Sbjct: 271 TPDVVTYNVLVNGICKEGR---LDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMD 327
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILI 273
A + M + G ++L++ L + + A + + C P +S +N L+
Sbjct: 328 AEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQP-NSLSYNPLL 386
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
HG+CK +K+D A + ++ M +G PD+V+Y + C++ + L ++ KGC
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P +ITY V+ L KA + +A+K+ ++M++ D PDT YSSL+ LS+ G+V +A +
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
F + ++ GV PN +T+N+++ C + + A+ L M CKP +Y L++
Sbjct: 507 FHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIE 562
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 169/378 (44%), Gaps = 11/378 (2%)
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA---VEAFRGM 223
MV + FCL+ + +E N VS T +I ++ R + V A +
Sbjct: 4 MVSTSSAQEGFCLIQQFHRECKRGNKLDVSGRTTRSISSKVPLWSRKRNRLVLVSAASQV 63
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
+ G+ + DTL G+S + F L N + +T +++
Sbjct: 64 ESSGLNGRAQKF----DTLASGHSNSNGNGHFSSANSSFVLEDVESNNHLRQLVRTGELE 119
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+ K ++ M G PD++ T I +CR RK L+ ++ G P VITY +++
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMI 179
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
KA +IN AL V ++M PD Y++++ L +G++K A E+ + M ++
Sbjct: 180 SGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCY 236
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P+V+TY +I + C S A+KLL +M + C PD TY L+ C++ R+
Sbjct: 237 PDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKF 296
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-E 522
L M + + T+ ++R + +G+ A +M+ KG P T+ +L L
Sbjct: 297 LNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
Query: 523 KKRLGNAKERINKLLAHA 540
K LG A + + K+ H
Sbjct: 357 KGLLGRAIDILEKMPKHG 374
>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
Length = 632
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 97/360 (26%), Positives = 174/360 (48%), Gaps = 5/360 (1%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF WA + Y H Y ++ L +++ MW++++EM V+ +S ++R
Sbjct: 109 FFRWAAKKRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRM 168
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---CIP 263
L A+ F +K + +A + ++ L+ E ++++ E + C P
Sbjct: 169 LGNAKMIGKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQP 228
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ ++ LI +CK + D A + + EM + G P YT I + + +
Sbjct: 229 -DTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSL 287
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+EM+ C+P V TYT ++ LGKA +I+EA Y +M+ + C PDT +++I L K
Sbjct: 288 FEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGK 347
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC-ARSEEENALKLLQKMEEDLCKPDCE 442
AGR+ D ++FE+M +PNV+TYNT+I + ++S ++M+ P
Sbjct: 348 AGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPF 407
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY+ L+ C+ R++ LL M + Y SL+ L ++ + +LAC F+E+
Sbjct: 408 TYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 467
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 163/328 (49%), Gaps = 4/328 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++R L + GR D+A + M++ G + DT ++ +++ L K ++ K+F E
Sbjct: 302 TYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEM 361
Query: 259 --KDCIPLSSQIFNILIHGWCKTR-KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
CIP + +N +I +++ +V + + M G SP +Y+ I+ +C+
Sbjct: 362 GVSHCIP-NVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTN 420
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
K L+EM EKG P Y ++ ALGKAK+ + A ++++++K + Y+
Sbjct: 421 RIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 480
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I L KAGR+ DA +F++M K G PNV YN ++S + AL ++KM+E
Sbjct: 481 VMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEH 540
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C PD +Y +L + +LT+M + + DA +Y +++ L +G E A
Sbjct: 541 GCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEA 600
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+EM + G TY + E + K
Sbjct: 601 AELMKEMNALGFEYDLITYSSILEAIGK 628
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 112/240 (46%), Gaps = 7/240 (2%)
Query: 116 EALKGCGVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGK 173
E +KG G+S S + F +N + A + G+ P Y +++D LGK
Sbjct: 395 ERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLE-EMDEKGFPPCPAAYCSLIDALGK 453
Query: 174 SKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR 233
+K++ L EL +E+ E N G S + +++ L + GR DDA+ F M K G +
Sbjct: 454 AKRYDLACELFQELKE-NCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVY 512
Query: 234 ALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKE 291
A + LM L + ++ A + ++ C+P +NI+++G KT A + +
Sbjct: 513 AYNALMSGLARACMLDEALTTMRKMQEHGCLP-DINSYNIILNGLAKTGGPHRAMEMLTN 571
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M PD VSY + F + + +KEM G + +ITY+ ++ A+GK Q
Sbjct: 572 MKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 6/214 (2%)
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD-CLPDTSFYSSLIFILSKA 384
+++ + C+P+ Y ++ L Q + ++Y +M ++ C PDT YS+LI K
Sbjct: 184 QIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAFCKL 243
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
GR A + +MK+ G+ P Y +IS AL L ++M C+PD TY
Sbjct: 244 GRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTY 303
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L++ + R+ M + D +++ L ++G+L+ FEEM
Sbjct: 304 TELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGV 363
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
+P TY + K L +K R++++ +
Sbjct: 364 SHCIPNVVTYNTI-----IKALFESKSRVSEVFS 392
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 186/360 (51%), Gaps = 4/360 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
++ + ++K+F L+ + K++ ELN ++ T++ ++ R + A +
Sbjct: 81 FSRFFSAIARTKQFNLVLDFCKQL-ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKV 139
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
K G E DT + L+ L V A + C P +N +++G C++
Sbjct: 140 MKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP-DVVTYNSIVNGICRSGD 198
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
A +++M ++ DV +Y+ I+ CR+ KEM+ KG K SV+TY
Sbjct: 199 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 258
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L KA + N+ + + M S + +P+ ++ L+ + K G++++ANE++++M +G
Sbjct: 259 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 318
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PN++TYNT++ C ++ A +L M + C PD T+ L+K C KR+
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 378
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ ++ K + +A TY+ LV+G +SGK++LA F+EM+S G++P TY +L + L
Sbjct: 379 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 438
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 184/382 (48%), Gaps = 3/382 (0%)
Query: 145 FGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
F + K + GY +NT++ L K LV M E N + T ++I
Sbjct: 131 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NGCQPDVVTYNSI 189
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CI 262
+ + R G A++ R M++ V+ D S ++D+L + ++ A +F E + I
Sbjct: 190 VNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 249
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
S +N L+ G CK K +D +K+M + P+V+++ ++ + +E ++ ++
Sbjct: 250 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 309
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
KEM +G P++ITY +M +++EA + + M + C PD ++SLI
Sbjct: 310 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 369
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
RV D ++F ++ K+G+V N +TY+ ++ C + + A +L Q+M PD
Sbjct: 370 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 429
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY LL C +++ + + K+ + + Y +++ G+ + GK+E A + F +
Sbjct: 430 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 489
Query: 503 ISKGIVPYHSTYKMLEEKLEKK 524
KG+ P TY ++ L KK
Sbjct: 490 PCKGVKPNVMTYTVMISGLCKK 511
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 187/395 (47%), Gaps = 39/395 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN++V+ + +S L +L+++M+E N + T STI+ L R G D A+ F+ M
Sbjct: 186 YNSIVNGICRSGDTSLALDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 244
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ G++ + L+ L K + + ++ +P + FN+L+ + K K
Sbjct: 245 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP-NVITFNVLLDVFVKEGK 303
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A + KEM +G SP++++Y ++ YC + + ++ L M C P ++T+T
Sbjct: 304 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 363
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ K++++ +KV+ + + + YS L+ ++G++K A E+F++M G
Sbjct: 364 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 423
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKME---------------EDLC--------- 437
V+P+V+TY ++ C + E AL++ + ++ E +C
Sbjct: 424 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 483
Query: 438 -----------KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
KP+ TY ++ C+K + N LL M ++ + + TY +L+R
Sbjct: 484 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 543
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ G L + EEM S G S+ KM+ + L
Sbjct: 544 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 171/354 (48%), Gaps = 7/354 (1%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLAT 199
+ A F +T+ G + YN++V L K+ K+ L+K+M ++ V ++ T
Sbjct: 234 IDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM--VSREIVPNVIT 290
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LE 257
+ ++ V+ G+ +A E ++ M G+ + + LMD N + A + +
Sbjct: 291 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 350
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C P F LI G+C ++VDD K + + ++G + V+Y+ ++ +C+
Sbjct: 351 RNKCSP-DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 409
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ ++ +EM G P V+TY I++ L ++ +AL+++E ++ Y+++
Sbjct: 410 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 469
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + K G+V+DA +F + +GV PNV+TY MIS C + A LL+KMEED
Sbjct: 470 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 529
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
P+ TY L++ R + L+ M S DA + ++ L+ + K
Sbjct: 530 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 583
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 117/237 (49%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA +EM + P +V ++ F R K F V D K+++ G ++ T
Sbjct: 58 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + + A V K+ PDT+ +++LI L G+V +A + + M +
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+V+TYN++++ C + AL LL+KMEE K D TY+ ++ CR +
Sbjct: 178 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 237
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M + TY SLVRGL ++GK ++M+S+ IVP T+ +L
Sbjct: 238 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 294
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 173/402 (43%), Gaps = 39/402 (9%)
Query: 175 KKFCLMWELVKEMDELNN----GYVSLA-TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
K +C++ + M N G V+ A T S +++ + G+ A E F+ M +GV
Sbjct: 366 KGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVL 425
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
D +L+D L +E A ++F + K + L ++ +I G CK KV+DA
Sbjct: 426 PDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNL 485
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+ +G P+V++YT I C++ + + L++M+E G P+ TY ++ A +
Sbjct: 486 FCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLR 545
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLI-FILSKAGRV----------KDANEIFEDM 397
+ + K+ E+MKS D S +I +LS R+ K ++ E
Sbjct: 546 DGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELS 605
Query: 398 KKQGVVPNVLTY------NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ + + LT+ NT+ +S + E + + + DL K + L K
Sbjct: 606 GSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAE-LNRDLRK--LRRSSVLKKFK 662
Query: 452 CRKKRMKVLNFLLTH---------MFKNDVSMDAGTYASLVRGLIESGK---LELACSFF 499
R R+ V N LLT M ++ DA YA + G+ + A
Sbjct: 663 NRDVRVLVTNELLTWGLEDAECDLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELH 722
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHA 540
+EMI +GI P TY L + K+ RL A + ++ ++
Sbjct: 723 KEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKG 764
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 173/344 (50%), Gaps = 2/344 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T +T++ + + DD E R M G+E + + +V+++ L + ++ V
Sbjct: 239 NVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVL 298
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E K L +N LI G+CK A EM + G SP V++YT I C+
Sbjct: 299 TEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKA 358
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + + L +M+ +G P+ TYT ++ + +NEA +V ++M + P Y
Sbjct: 359 GNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTY 418
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI AG++ DA + EDMK++G+ P+V++Y+T++S C + + AL++ +KM
Sbjct: 419 NALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVA 478
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
KPD TY+ L++ C ++R K L M + + D TY +L+ G L+
Sbjct: 479 KGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQK 538
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLL 537
A EM+ KG++P TY +L L K+ R AK + KL
Sbjct: 539 AIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLF 582
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 185/365 (50%), Gaps = 5/365 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELV-KEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G+M YN ++D +SK+ E V KEM + + ++ T + ++R G D
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQ-SQVSPNVFTYNILIRGFCLAGNLD 222
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
A+ F M+K G + + L+D K ++ +++ + K P + +N++
Sbjct: 223 VALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEP-NLISYNVV 281
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I+G C+ ++ + + EM ++G+S D V+Y I+ YC+E +F + EM G
Sbjct: 282 INGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGL 341
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
PSVITYT ++H++ KA +N A + ++M+ P+ Y++L+ S+ G + +A
Sbjct: 342 SPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYR 401
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ ++M G P+V+TYN +I+ C + +A+ +L+ M+E PD +Y+ +L C
Sbjct: 402 VLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFC 461
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
R + + M + D TY+SL++G E + + AC F+EM+ G+ P
Sbjct: 462 RSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEF 521
Query: 513 TYKML 517
TY L
Sbjct: 522 TYTAL 526
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 190/411 (46%), Gaps = 22/411 (5%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMR 205
F + GY YNT++ G K+ LV + L +G S+ T ++++
Sbjct: 296 FVLTEMNKRGYSLDEVTYNTLIK--GYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIH 353
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPL 264
+ + G + A E M+ G+ + R + L+D + + AY+V E D
Sbjct: 354 SMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSP 413
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
S +N LI+G C K+ DA +++M ++G +PDVVSY+ + +CR D +
Sbjct: 414 SVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVK 473
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
++M KG KP ITY+ ++ + ++ EA ++++M PD Y++LI
Sbjct: 474 RKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCME 533
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G ++ A ++ +M ++GV+P+V+TY+ +I+ ++ A +LL K+ + P TY
Sbjct: 534 GDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTY 593
Query: 445 APLLKMC---------------CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
L++ C C K M + + M + + D Y ++ G
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRG 653
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHA 540
G + A S ++EM+ G + + T L + L K+ G E +N ++A+
Sbjct: 654 GDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKE--GKVNE-LNSVIANV 701
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 138/291 (47%), Gaps = 4/291 (1%)
Query: 249 EHAYKVFLEFKDCIPL---SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
E A VF ++ L +S +F++++ + + +D A + GF P V+SY
Sbjct: 114 EDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYN 173
Query: 306 CFIEHYCREK-DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
++ R K + ++ KEM + P+V TY I++ A ++ AL+ +++M+
Sbjct: 174 AVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEK 233
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
CLP+ Y++LI K ++ D E+ M +G+ PN+++YN +I+ C +
Sbjct: 234 KGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKE 293
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
+L +M + D TY L+K C++ + M ++ +S TY SL+
Sbjct: 294 ISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIH 353
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
+ ++G + A F ++M +G+ P TY L + +K N R+ K
Sbjct: 354 SMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLK 404
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/432 (23%), Positives = 184/432 (42%), Gaps = 53/432 (12%)
Query: 137 FSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS 196
+ +L A FF + + G + YNT++D K +K +EL++ M L +
Sbjct: 217 LAGNLDVALRFFDRMEKK-GCLPNVVTYNTLIDGYCKLRKIDDGFELLRSM-ALKGLEPN 274
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L + + ++ L R GR + M K G D + L+ K + A +
Sbjct: 275 LISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHA 334
Query: 257 E-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E + + S + LIH CK ++ A + + +M +G P+ +YT ++ + ++
Sbjct: 335 EMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKG 394
Query: 316 DFRKVDDTLKEMQEKGCKPSVIT-----------------------------------YT 340
+ LKEM + G PSV+T Y+
Sbjct: 395 YMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYS 454
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
V+ ++ ++EAL+V KM + PDT YSSLI + R K+A ++F++M +
Sbjct: 455 TVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRV 514
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+ TY +I++ C + + A++L +M E PD TY+ L+ ++ R +
Sbjct: 515 GLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREA 574
Query: 461 NFLLTHMF---------------KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
LL +F +N +++ + SL++G G + A FE M+ K
Sbjct: 575 KRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEK 634
Query: 506 GIVPYHSTYKML 517
P + Y ++
Sbjct: 635 NHKPDGTAYNVM 646
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 87/211 (41%), Gaps = 16/211 (7%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIP----- 263
G A++ M + GV D SVL++ L K A ++ L+ +++ +P
Sbjct: 534 GDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTY 593
Query: 264 --LSSQIFNI-------LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
L NI LI G+C + +A + + M ++ PD +Y I +CR
Sbjct: 594 HTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRG 653
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
D RK KEM + G +T ++ L K ++NE V + L +
Sbjct: 654 GDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQA 713
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
L+ I + G + ++ +M K G +PN
Sbjct: 714 KVLVEINHREGNMDVVLDVLAEMAKDGFLPN 744
>gi|414884149|tpg|DAA60163.1| TPA: hypothetical protein ZEAMMB73_830458 [Zea mays]
Length = 378
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 156/312 (50%), Gaps = 1/312 (0%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS-QIF 269
GR +D + F+ M + G + D L+ MD + K VE +F + K L + +
Sbjct: 3 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+ILIHG K + + M Q+GF+ D +Y ++ +C+ K + L+EM+
Sbjct: 63 SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKV 122
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
K P+V TY ++ L K +++EA ++E+ KS + YSSLI K GR+ +
Sbjct: 123 KHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDE 182
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A I E+M K+G+ PNV T+N+++ + E AL Q M+E C P+ TY+ L+
Sbjct: 183 AYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILIN 242
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
CR ++ M K + + TY +++ GL + G + ACS FE + G +P
Sbjct: 243 GLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIP 302
Query: 510 YHSTYKMLEEKL 521
+++ L E +
Sbjct: 303 DAASFNALIEGM 314
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 131/252 (51%), Gaps = 1/252 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
+ S ++ L + G+ + F MK+ G D RA + ++D K V+ AY+ E
Sbjct: 61 SYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEM 120
Query: 259 K-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K +P + + +I G K ++D+A +E +G +V+ Y+ I+ + +
Sbjct: 121 KVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRI 180
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ L+EM +KG P+V T+ +M AL KA++INEAL ++ MK C P+T YS L
Sbjct: 181 DEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSIL 240
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L + + A +++M+KQG+VPNV+TY TMIS +A L ++ + +
Sbjct: 241 INGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGG 300
Query: 438 KPDCETYAPLLK 449
PD ++ L++
Sbjct: 301 IPDAASFNALIE 312
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 131/257 (50%), Gaps = 2/257 (0%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A Q G+ YN +VD KS K +E ++EM ++ + ++AT +I+ L +
Sbjct: 84 AMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEM-KVKHVPPTVATYGSIIDGLAKI 142
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIF 269
R D+A F K G+E + S L+D K ++ AY + E K + + +
Sbjct: 143 DRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTW 202
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N L+ K ++++A + M + SP+ +Y+ I CR + + K +EMQ+
Sbjct: 203 NSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQK 262
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+G P+V+TYT ++ L K I +A ++E+ K++ +PD + +++LI +S A R +
Sbjct: 263 QGLVPNVVTYTTMISGLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIE 322
Query: 390 ANEIFEDMKKQGVVPNV 406
A +FE+ + +G NV
Sbjct: 323 AYHVFEETRLRGCRINV 339
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 127/249 (51%), Gaps = 1/249 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ + G+ D A EA MK V ++D L K + ++ AY +F E K
Sbjct: 98 NAVVDGFCKSGKVDKAYEALEEMKVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKS 157
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
I L+ +++ LI G+ K ++D+A ++EM ++G +P+V ++ ++ + ++ +
Sbjct: 158 KGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLAPNVYTWNSLMDALVKAEEINE 217
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ M+E C P+ TY+I+++ L + ++ N+A +++M+ +P+ Y+++I
Sbjct: 218 ALICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLVPNVVTYTTMIS 277
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L+K G + DA +FE K G +P+ ++N +I + A + ++ C+
Sbjct: 278 GLAKVGNITDACSLFERFKANGGIPDAASFNALIEGMSHANRAIEAYHVFEETRLRGCRI 337
Query: 440 DCETYAPLL 448
+ + LL
Sbjct: 338 NVKACISLL 346
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 107/225 (47%), Gaps = 9/225 (4%)
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
R++D K+ KEM +GC+P + M + KA + + ++E +K LPD
Sbjct: 4 RKEDGHKI---FKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVR 60
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
YS LI L+KAG+ ++ + IF MK++G + YN ++ C + + A + L++M
Sbjct: 61 SYSILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEM 120
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ P TY ++ + R+ L + ++ Y+SL+ G + G++
Sbjct: 121 KVKHVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRI 180
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
+ A EEM+ KG+ P T+ L + L K E IN+ L
Sbjct: 181 DEAYLILEEMMKKGLAPNVYTWNSLMDALVK------AEEINEAL 219
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 69/139 (49%)
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
GR +D ++IF++M ++G P++ NT + + E + + ++ PD +Y
Sbjct: 3 GRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSY 62
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
+ L+ + + + + + M + ++DA Y ++V G +SGK++ A EEM
Sbjct: 63 SILIHGLTKAGQARETSSIFHAMKQRGFALDARAYNAVVDGFCKSGKVDKAYEALEEMKV 122
Query: 505 KGIVPYHSTYKMLEEKLEK 523
K + P +TY + + L K
Sbjct: 123 KHVPPTVATYGSIIDGLAK 141
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/418 (27%), Positives = 191/418 (45%), Gaps = 47/418 (11%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
D+ + F WA Q GY H+ +Y ++D LG + F ++ L+ +M E G V +
Sbjct: 83 DVETSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKE--EGIVFRES 140
Query: 200 MST-IMRRLVRGGRYDDAVEAFRGMKK-YGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
+ IM+ R G A MK Y E R+ +V++D LV GN A VF
Sbjct: 141 LFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYD 200
Query: 256 ------------------------------LEFKD-----CIPLSSQIFNILIHGWCKTR 280
L +D C+P +S I+ LI K
Sbjct: 201 MLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVP-NSMIYQTLIDALSKRD 259
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+VD+A K ++EMF G PDV ++ I +CR + + M KG P+ +TY
Sbjct: 260 RVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYG 319
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE-IFEDMKK 399
+MH L K +I+EA + K+ P+ +++L+ + GR+ +A +++ M
Sbjct: 320 YLMHGLCKTCRIDEAQALLSKVPG----PNVVHFNTLVNGFVRNGRLNEATAFVYDKMIN 375
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G VP+V T++T+++ C + +AL+L+ M+ CKP+ TY L+ C+K +++
Sbjct: 376 NGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEE 435
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+L M S++ Y +L+ L + GK+ A F EM SKG P T+ L
Sbjct: 436 AGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSL 493
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 157/337 (46%), Gaps = 2/337 (0%)
Query: 190 LNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
+NNGYV + T ST++ L + G + A+E M G + + ++L+D K +
Sbjct: 374 INNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQL 433
Query: 249 EHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
E A + E L++ +N LI CK K+ +A EM +G PD+ ++
Sbjct: 434 EEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSL 493
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I CR + ++M +G + +T+ ++HA + +I EALK+ M C
Sbjct: 494 IFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGC 553
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
D Y+ LI L K G V+ +FE+M ++G+ P+++T N +I+ C + NAL+
Sbjct: 554 PLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALE 613
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
++ M PD TY L+ C++ R++ L + + D+ TY +L+ L
Sbjct: 614 FMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLC 673
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
G + AC + G VP T+ +L K+
Sbjct: 674 REGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQ 710
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 190/419 (45%), Gaps = 44/419 (10%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
T+ G + +Y T++D L K + +L++EM L + T +T++ R R
Sbjct: 237 TKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEM-FLMGCPPDVNTFNTVIYGFCRLNR 295
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNI 271
+ + M G + LM L K ++ A + + +P + + FN
Sbjct: 296 VLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSK----VPGPNVVHFNT 351
Query: 272 LIHGWCKTRKVDDAQKAMKE-MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
L++G+ + ++++A + + M G+ PDV +++ + C++ F + + +M K
Sbjct: 352 LVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAK 411
Query: 331 GCKPSVITYTIVM-----------------------------------HALGKAKQINEA 355
GCKP++ TYTI++ AL K +I+EA
Sbjct: 412 GCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEA 471
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
L ++ +M S C PD ++SLIF L + ++DA ++ DM +GV+ N +T+NT+I +
Sbjct: 472 LDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHA 531
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
R E + ALKL+ M C D TY L+K C+ ++ L M + ++
Sbjct: 532 FLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPS 591
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
T L+ G +GK+ A F +MI +G P TY L L K+ G +E +N
Sbjct: 592 IITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKR--GRIQEALN 648
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 192/438 (43%), Gaps = 13/438 (2%)
Query: 54 FFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDK 113
F PD + + G+ +R+ E +++ R++ + T D L +
Sbjct: 272 FLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGF-TPNDMTYGYLMHGLCKTCR 330
Query: 114 VVEA------LKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTM 167
+ EA + G V N+LV +R + L A F GY+ ++T+
Sbjct: 331 IDEAQALLSKVPGPNVVHFNTLVNGFVR--NGRLNEATAFVYDKMINNGYVPDVFTFSTL 388
Query: 168 VDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG 227
V+ L K F ELV +MD +L T + ++ + G+ ++A R M G
Sbjct: 389 VNGLCKKGLFGSALELVNDMDA-KGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKG 447
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDA 285
+T + L+ L K + A +F E K C P FN LI G C+ +++DA
Sbjct: 448 FSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKP-DIFTFNSLIFGLCRVDEMEDA 506
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
++M +G + V++ I + R + ++ + +M +GC ITY ++ A
Sbjct: 507 LALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKA 566
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
L K + + L ++E+M P + LI AG+V +A E DM +G P+
Sbjct: 567 LCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPD 626
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
++TYN++I+ C R + AL L +K++ + +PD TY L+ CR+ FLL
Sbjct: 627 IVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLY 686
Query: 466 HMFKNDVSMDAGTYASLV 483
+N + T+ LV
Sbjct: 687 RGVENGFVPNDVTWNILV 704
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 170/366 (46%), Gaps = 17/366 (4%)
Query: 71 GWVESHRLNEKSR-ISSRVLSENHETDVDKISKILSKQ-----YQSPDKVVEAL--KGC- 121
G+V + RLNE + + ++++ + DV S +++ + S ++V + KGC
Sbjct: 355 GFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCK 414
Query: 122 -GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLM 180
++ L++ ++ L A G G+ YN ++ L K K
Sbjct: 415 PNLNTYTILIDGFCKK--GQLEEA-GLILREMLTKGFSLNTVGYNALISALCKHGKIHEA 471
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
++ EM + T ++++ L R +DA+ +R M GV ++ + L+
Sbjct: 472 LDMFGEMSS-KGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIH 530
Query: 241 TLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
++ ++ A K+ + F+ C PL +N LI CKT V+ +EM ++G +
Sbjct: 531 AFLRRGEIQEALKLVNDMLFRGC-PLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLT 589
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P +++ I +C + +++M +G P ++TY +++ L K +I EAL +
Sbjct: 590 PSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNL 649
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+EK++++ PD+ Y++LI L + G DA + + G VPN +T+N ++ +
Sbjct: 650 FEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGK 709
Query: 419 RSEEEN 424
+S E
Sbjct: 710 QSNSEG 715
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 157/309 (50%), Gaps = 7/309 (2%)
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ----IFNILIHGW 276
R M +G+ D L++++++L N V+ A+ + + L Q F LI G
Sbjct: 69 RQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKI---LKLGHQPDATTFTTLIRGL 125
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
C K+ +A +M +GF P+VV+Y I C+++ + + EM KG P++
Sbjct: 126 CVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNI 185
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+TY ++H L K + + +M +PD ++++ L K G V +A+++ +
Sbjct: 186 VTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDM 245
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M +GV PNV+TYN ++ C R+E + A+K+ M C + +Y L+ C+ +
Sbjct: 246 MIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQS 305
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ +L M + +++ + TY +L+ GL G+L+ A S F EM+++G +P TY+
Sbjct: 306 VDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRT 365
Query: 517 LEEKLEKKR 525
L + L K R
Sbjct: 366 LSDYLCKNR 374
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 155/330 (46%), Gaps = 1/330 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T +T++R L G+ +A+ F M G + + L++ L K V A+ +F E
Sbjct: 116 TTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSE 175
Query: 258 -FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
I + +N LIHG CK + M EM PDV + ++ C+E
Sbjct: 176 MITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGM 235
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ D + M +G +P+V+TY +M +++ A+KV++ M DC+ + Y++
Sbjct: 236 VAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNT 295
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI K V A +FE+M +Q + PN +TYNT+I C ++A+ L +M
Sbjct: 296 LINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARG 355
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY L C+ + + LL + ++ D Y +++ G+ +G+LE A
Sbjct: 356 QIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDAR 415
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
F + SKG+ P TY ++ L K+ L
Sbjct: 416 DLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 445
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/373 (24%), Positives = 161/373 (43%), Gaps = 16/373 (4%)
Query: 157 YMHTPEM---YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+MH P + ++ + K K + + L +MD + T++ ++ R
Sbjct: 574 HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIP-PDVYTLNILINSFCHLRRL 632
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
A + K G + D LM+ L K + + +F +N LI
Sbjct: 633 GYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIF------------TYNSLI 680
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
H C + + EM P+VV ++ ++ C+E D + M ++G +
Sbjct: 681 HALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVE 740
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P V+TYT +M +++EA+KV++ M C+P+ Y+ LI + R+ A +
Sbjct: 741 PDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGL 800
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
E M QG++ + +TYNT+I C ++A+ L +M PD TY LL C+
Sbjct: 801 LEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 860
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+ LL + +++ D Y + G+ +G+LE A F + SKG+ P T
Sbjct: 861 NHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRT 920
Query: 514 YKMLEEKLEKKRL 526
Y ++ L K+ L
Sbjct: 921 YNIMIHGLCKRGL 933
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 138/276 (50%), Gaps = 8/276 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFR 221
YN+++ L C + ++E+ N + ++ ST++ L + G A +
Sbjct: 676 YNSLIHALCN---LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVD 732
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKT 279
M K GVE D + LMD + ++ A KVF + K C+P + + +NILI+G+C+
Sbjct: 733 MMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVP-NVRSYNILINGYCQI 791
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+++D A +++M QG D V+Y I C + EM G P ++TY
Sbjct: 792 QRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTY 851
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
I++ L K + EA+ + + ++ + D Y+ I + +AG ++ A ++F ++
Sbjct: 852 RILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSS 911
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+G+ P+V TYN MI C R + A KL +KM+E+
Sbjct: 912 KGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDEN 947
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/380 (21%), Positives = 163/380 (42%), Gaps = 4/380 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYD 214
G+ Y T+++ L K ++ + + EM + G ++ T ++++ L + +
Sbjct: 145 GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEM--ITKGISPNIVTYNSLIHGLCKLCEWK 202
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILI 273
M + D L+ ++D L K V A+ V + + + +N L+
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALM 262
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G C +VD A K M + +V+SY I YC+ + K +EM +
Sbjct: 263 DGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELT 322
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ +TY ++H L ++ +A+ ++ +M + +PD Y +L L K + A +
Sbjct: 323 PNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMAL 382
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+ ++ P++ Y T++ C E E+A L + +P+ TY ++ C+
Sbjct: 383 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCK 442
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+ + + L + M KN S + TY + RG + + + EEM+++G ST
Sbjct: 443 QGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST 502
Query: 514 YKMLEEKLEKKRLGNAKERI 533
+L L L + ++I
Sbjct: 503 TTLLVGMLSDDGLDQSVKQI 522
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 117/255 (45%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P S+ FN L+ KT+ ++M G PDV + I C
Sbjct: 42 PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFS 101
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L ++ + G +P T+T ++ L +I EAL +++KM + P+ Y +LI L
Sbjct: 102 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 161
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K +V +A IF +M +G+ PN++TYN++I C E ++ L+ +M + PD
Sbjct: 162 KDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVF 221
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
T ++ C++ + + ++ M V + TY +L+ G ++++A F+ M
Sbjct: 222 TLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTM 281
Query: 503 ISKGIVPYHSTYKML 517
+ K V +Y L
Sbjct: 282 VHKDCVANVISYNTL 296
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 119/301 (39%), Gaps = 57/301 (18%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA + M P V +T + + K + V +M G P V T I
Sbjct: 562 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 621
Query: 342 VMHALGKAKQINEALKVYE----------------------KMKSDDCLPDTSFYSSLIF 379
++++ +++ A V KM + PD Y+SLI
Sbjct: 622 LINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIH 681
Query: 380 IL-----------------------------------SKAGRVKDANEIFEDMKKQGVVP 404
L K G + A+++ + M K+GV P
Sbjct: 682 ALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEP 741
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+V+TY ++ C RSE + A+K+ M C P+ +Y L+ C+ +RM LL
Sbjct: 742 DVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLL 801
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M + D TY +L+ GL G+L+ A + F EM++ G +P TY++L + L K
Sbjct: 802 EQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKN 861
Query: 525 R 525
Sbjct: 862 H 862
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 104/238 (43%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A M + P V + + + K + ++M G P V T I
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+++L +++ A K+ PD + +++LI L G++ +A +F+ M +G
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PNV+TY T+I+ C + A + +M P+ TY L+ C+ K +
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L+ M + + D T ++V L + G + A + MI +G+ P TY L +
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMD 263
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 3/226 (1%)
Query: 317 FRKVDD---TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
F +D+ T M K PS + + ++ ++ K K + L + +M S PD
Sbjct: 23 FNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYT 82
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+ +I L RV A + K G P+ T+ T+I C + AL L KM
Sbjct: 83 LAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMI 142
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+ +P+ TY L+ C+ +++ + + M +S + TY SL+ GL + + +
Sbjct: 143 GEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWK 202
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
+ EM+ I+P T + + L K+ + + ++ H
Sbjct: 203 HVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIH 248
>gi|449511130|ref|XP_004163870.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 847
Score = 159 bits (403), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 106/373 (28%), Positives = 181/373 (48%), Gaps = 5/373 (1%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
D A FF WA Y H +Y M+++L K+K C + + + +
Sbjct: 225 DERNALRFFYWADRLWRYRHDSSVYLVMLEILSKTK-LCQGAKRILRLMTRRRIQLCPEA 283
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
+M R GR DA++ M+K GVE + + + LV GN ++ A + F E
Sbjct: 284 FGFVMVSYSRAGRLRDAMKVLTLMQKAGVEPNLSICNTAIHILVMGNELKKALR-FAERM 342
Query: 260 DCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
I ++ + +N LI G+C +VD A + + +M +G SPD VSY + CR+K
Sbjct: 343 VLIGIAPNVVTYNCLIKGYCNVHQVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRL 402
Query: 318 RKVDDTLKEMQ-EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
++ + +K+MQ + P +TY ++ L K +EAL++ ++ + D YS+
Sbjct: 403 NEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSA 462
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
++ K G+++ A E+ +M +G P+V+TY +++ C + + A K++Q+M +
Sbjct: 463 IVHAYCKEGKIQKAKELVSEMFSKGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHH 522
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
CKP+ TY L CR + ++ + + +A TY+ +V GL GKL AC
Sbjct: 523 CKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSVVVHGLRREGKLNEAC 582
Query: 497 SFFEEMISKGIVP 509
EMI KG P
Sbjct: 583 DVVREMIGKGFFP 595
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 163/334 (48%), Gaps = 7/334 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ +L + K+ + EL+K+M + T +++++ L + G D+A+E +
Sbjct: 389 YYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTYNSLIQMLSKHGHGDEALEILQEA 448
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+K + D S ++ K ++ A ++ E K C P + ++ G+C+ K
Sbjct: 449 EKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFSKGCDP-DVVTYTSVLDGFCRIGK 507
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A+K M++M++ P+ V+YT F+ CR + + +E+ P+ ITY++
Sbjct: 508 LDQAKKMMQQMYKHHCKPNAVTYTTFLNGLCRNGKSLEARKMMNMSEEEWWTPNAITYSV 567
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+H L + ++NEA V +M P+ + L+ L + G+ ++AN++ ++ +G
Sbjct: 568 VVHGLRREGKLNEACDVVREMIGKGFFPNPVEINLLVHSLCRDGKPREANQLLKECMNKG 627
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK--PDCETYAPLLKMCCRKKRMKV 459
NV+ + T+I C + + E AL LL M LC PD TY L+ + R++
Sbjct: 628 CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMY--LCNKHPDTVTYTALIDALAKTDRIEE 685
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
L M + + TY S++ G++E
Sbjct: 686 ATELTMKMLRQGLVPSPVTYRSVIHQYCRKGRVE 719
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 123/285 (43%), Gaps = 36/285 (12%)
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
S ++ +++ KT+ A++ ++ M ++ ++ + Y R R L
Sbjct: 246 SSVYLVMLEILSKTKLCQGAKRILRLMTRRRIQLCPEAFGFVMVSYSRAGRLRDAMKVLT 305
Query: 326 EMQEKGCK-----------------------------------PSVITYTIVMHALGKAK 350
MQ+ G + P+V+TY ++
Sbjct: 306 LMQKAGVEPNLSICNTAIHILVMGNELKKALRFAERMVLIGIAPNVVTYNCLIKGYCNVH 365
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG-VVPNVLTY 409
Q+++A+++ ++M S C PD Y +++ +L + R+ + E+ + M+ ++P+ +TY
Sbjct: 366 QVDQAMELIDQMPSKGCSPDKVSYYTVMGLLCRDKRLNEIRELIKKMQTDSKLLPDHVTY 425
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N++I + AL++LQ+ E+ K D Y+ ++ C++ +++ L++ MF
Sbjct: 426 NSLIQMLSKHGHGDEALEILQEAEKLRFKVDKVEYSAIVHAYCKEGKIQKAKELVSEMFS 485
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
D TY S++ G GKL+ A ++M P TY
Sbjct: 486 KGCDPDVVTYTSVLDGFCRIGKLDQAKKMMQQMYKHHCKPNAVTY 530
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 159 bits (402), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 185/353 (52%), Gaps = 4/353 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
+ ++K+F L+ + K++ ELN ++ T++ ++ R + A + K G E
Sbjct: 98 IARTKQFNLVLDFCKQL-ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
DT + L+ L V A + + C P +N +++G C++ A
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP-DVVTYNSIVNGICRSGDTSLALDL 215
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+++M ++ DV +Y+ I+ CR+ KEM+ KG K SV+TY ++ L K
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
A + N+ + + M S + +P+ ++ L+ + K G++++ANE++++M +G+ PN++T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YNT++ C ++ A +L M + C PD T+ L+K C KR+ + ++
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
K + +A TY+ LV+G +SGK++LA F+EM+S G++P TY +L + L
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 184/382 (48%), Gaps = 3/382 (0%)
Query: 145 FGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
F + K + GY +NT++ L K LV M E N + T ++I
Sbjct: 141 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NGCQPDVVTYNSI 199
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CI 262
+ + R G A++ R M++ V+ D S ++D+L + ++ A +F E + I
Sbjct: 200 VNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
S +N L+ G CK K +D +K+M + P+V+++ ++ + +E ++ ++
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
KEM +G P++ITY +M +++EA + + M + C PD ++SLI
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
RV D ++F ++ K+G+V N +TY+ ++ C + + A +L Q+M PD
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY LL C +++ + + K+ + + Y +++ G+ + GK+E A + F +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 503 ISKGIVPYHSTYKMLEEKLEKK 524
KG+ P TY ++ L KK
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKK 521
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 187/395 (47%), Gaps = 39/395 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN++V+ + +S L +L+++M+E N + T STI+ L R G D A+ F+ M
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ G++ + L+ L K + + ++ +P + FN+L+ + K K
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP-NVITFNVLLDVFVKEGK 313
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A + KEM +G SP++++Y ++ YC + + ++ L M C P ++T+T
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ K++++ +KV+ + + + YS L+ ++G++K A E+F++M G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKME---------------EDLC--------- 437
V+P+V+TY ++ C + E AL++ + ++ E +C
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 438 -----------KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
KP+ TY ++ C+K + N LL M ++ + + TY +L+R
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ G L + EEM S G S+ KM+ + L
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 171/354 (48%), Gaps = 7/354 (1%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLAT 199
+ A F +T+ G + YN++V L K+ K+ L+K+M ++ V ++ T
Sbjct: 244 IDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM--VSREIVPNVIT 300
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LE 257
+ ++ V+ G+ +A E ++ M G+ + + LMD N + A + +
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C P F LI G+C ++VDD K + + ++G + V+Y+ ++ +C+
Sbjct: 361 RNKCSP-DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ ++ +EM G P V+TY I++ L ++ +AL+++E ++ Y+++
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + K G+V+DA +F + +GV PNV+TY MIS C + A LL+KMEED
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
P+ TY L++ R + L+ M S DA + ++ L+ + K
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 117/237 (49%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA +EM + P +V ++ F R K F V D K+++ G ++ T
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + + A V K+ PDT+ +++LI L G+V +A + + M +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+V+TYN++++ C + AL LL+KMEE K D TY+ ++ CR +
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M + TY SLVRGL ++GK ++M+S+ IVP T+ +L
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 186/353 (52%), Gaps = 4/353 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
+ ++K+F L+ + K++ ELN ++ T++ ++ R + A + K G E
Sbjct: 98 IARTKQFNLVLDFCKQL-ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
DT + L++ L V A + + C P +N +++G C++ A
Sbjct: 157 DTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQP-DMVTYNSIVNGICRSGDTSLAFDM 215
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+++M ++ DV +Y+ I+ CR+ KEM+ KG K SV+TY ++ L K
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
A + N+ + + M S + +P+ ++ L+ + K G++++ANE++++M +G+ PN++T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YNT++ C ++ A +L M + C PD T+ L+K C KR+ + ++
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
K + +A TY+ LV+G +SGK++LA F+EM+S G++P TY +L + L
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 184/382 (48%), Gaps = 3/382 (0%)
Query: 145 FGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
F + K + GY +NT+++ L K LV M E N + T ++I
Sbjct: 141 FAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVE-NGCQPDMVTYNSI 199
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CI 262
+ + R G A + R M++ V+ D S ++D+L + ++ A +F E + I
Sbjct: 200 VNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
S +N L+ G CK K +D +K+M + P+V+++ ++ + +E ++ ++
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
KEM +G P++ITY +M +++EA + + M + C PD ++SLI
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
RV D ++F ++ K+G+V N +TY+ ++ C + + A +L Q+M PD
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY LL C +++ + + K+ + + Y +++ G+ + GK+E A + F +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 503 ISKGIVPYHSTYKMLEEKLEKK 524
KG+ P TY ++ L KK
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKK 521
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 191/400 (47%), Gaps = 41/400 (10%)
Query: 161 PEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
P+M YN++V+ + +S L ++++++M+E N + T STI+ L R G D A+
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAIS 249
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGW 276
F+ M+ G++ + L+ L K + + ++ +P + FN+L+ +
Sbjct: 250 LFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP-NVITFNVLLDVF 308
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
K K+ +A + KEM +G SP++++Y ++ YC + + ++ L M C P +
Sbjct: 309 VKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDI 368
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+T+T ++ K++++ +KV+ + + + YS L+ ++G++K A E+F++
Sbjct: 369 VTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQE 428
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME---------------EDLC---- 437
M GV+P+V+TY ++ C + E AL++ + ++ E +C
Sbjct: 429 MVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGK 488
Query: 438 ----------------KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
KP+ TY ++ C+K + N LL M ++ + + TY +
Sbjct: 489 VEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNT 548
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+R + G L + EEM S G S+ KM+ + L
Sbjct: 549 LIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 180/367 (49%), Gaps = 11/367 (2%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLAT 199
+ A F +T+ G + YN++V L K+ K+ L+K+M ++ V ++ T
Sbjct: 244 IDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM--VSREIVPNVIT 300
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LE 257
+ ++ V+ G+ +A E ++ M G+ + + LMD N + A + +
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C P F LI G+C ++VDD K + + ++G + V+Y+ ++ +C+
Sbjct: 361 RNKCSP-DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ ++ +EM G P V+TY I++ L ++ +AL+++E ++ Y+++
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + K G+V+DA +F + +GV PNV+TY MIS C + A LL+KMEED
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P+ TY L++ R + L+ M S DA + ++ L+ SG+L+ +
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDKS-- 596
Query: 498 FFEEMIS 504
F +M+S
Sbjct: 597 -FLDMLS 602
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 125/261 (47%), Gaps = 1/261 (0%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA +EM + P +V ++ F R K F V D K+++ G ++ T
Sbjct: 68 KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + + A V K+ PDT+ +++LI L G+V A + + M +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN 187
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+++TYN++++ C + A +L+KMEE K D TY+ ++ CR +
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L M + TY SLVRGL ++GK ++M+S+ IVP T+ +L +
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 521 LEKK-RLGNAKERINKLLAHA 540
K+ +L A E +++
Sbjct: 308 FVKEGKLQEANELYKEMITRG 328
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 185/353 (52%), Gaps = 4/353 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
+ ++K+F L+ + K++ ELN ++ T++ ++ R + A + K G E
Sbjct: 98 IARTKQFNLVLDFCKQL-ELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEP 156
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
DT + L+ L V A + + C P +N +++G C++ A
Sbjct: 157 DTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP-DVVTYNSIVNGICRSGDTSLALDL 215
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+++M ++ DV +Y+ I+ CR+ KEM+ KG K SV+TY ++ L K
Sbjct: 216 LRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCK 275
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
A + N+ + + M S + +P+ ++ L+ + K G++++ANE++++M +G+ PN++T
Sbjct: 276 AGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIIT 335
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YNT++ C ++ A +L M + C PD T+ L+K C KR+ + ++
Sbjct: 336 YNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNIS 395
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
K + +A TY+ LV+G +SGK++LA F+EM+S G++P TY +L + L
Sbjct: 396 KRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 184/382 (48%), Gaps = 3/382 (0%)
Query: 145 FGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
F + K + GY +NT++ L K LV M E N + T ++I
Sbjct: 141 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVE-NGCQPDVVTYNSI 199
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CI 262
+ + R G A++ R M++ V+ D S ++D+L + ++ A +F E + I
Sbjct: 200 VNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGI 259
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
S +N L+ G CK K +D +K+M + P+V+++ ++ + +E ++ ++
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
KEM +G P++ITY +M +++EA + + M + C PD ++SLI
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
RV D ++F ++ K+G+V N +TY+ ++ C + + A +L Q+M PD
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY LL C +++ + + K+ + + Y +++ G+ + GK+E A + F +
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499
Query: 503 ISKGIVPYHSTYKMLEEKLEKK 524
KG+ P TY ++ L KK
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKK 521
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 187/395 (47%), Gaps = 39/395 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN++V+ + +S L +L+++M+E N + T STI+ L R G D A+ F+ M
Sbjct: 196 YNSIVNGICRSGDTSLALDLLRKMEE-RNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ G++ + L+ L K + + ++ +P + FN+L+ + K K
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVP-NVITFNVLLDVFVKEGK 313
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A + KEM +G SP++++Y ++ YC + + ++ L M C P ++T+T
Sbjct: 314 LQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTS 373
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ K++++ +KV+ + + + YS L+ ++G++K A E+F++M G
Sbjct: 374 LIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHG 433
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKME---------------EDLC--------- 437
V+P+V+TY ++ C + E AL++ + ++ E +C
Sbjct: 434 VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAW 493
Query: 438 -----------KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
KP+ TY ++ C+K + N LL M ++ + + TY +L+R
Sbjct: 494 NLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAH 553
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ G L + EEM S G S+ KM+ + L
Sbjct: 554 LRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 180/367 (49%), Gaps = 11/367 (2%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLAT 199
+ A F +T+ G + YN++V L K+ K+ L+K+M ++ V ++ T
Sbjct: 244 IDAAISLFKEMETK-GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDM--VSREIVPNVIT 300
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LE 257
+ ++ V+ G+ +A E ++ M G+ + + LMD N + A + +
Sbjct: 301 FNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMV 360
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C P F LI G+C ++VDD K + + ++G + V+Y+ ++ +C+
Sbjct: 361 RNKCSP-DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKI 419
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ ++ +EM G P V+TY I++ L ++ +AL+++E ++ Y+++
Sbjct: 420 KLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTI 479
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + K G+V+DA +F + +GV PNV+TY MIS C + A LL+KMEED
Sbjct: 480 IEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P+ TY L++ R + L+ M S DA + ++ L+ SG+L+ +
Sbjct: 540 APNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLL-SGELDKS-- 596
Query: 498 FFEEMIS 504
F +M+S
Sbjct: 597 -FLDMLS 602
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 127/261 (48%), Gaps = 1/261 (0%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA +EM + P +V ++ F R K F V D K+++ G ++ T
Sbjct: 68 KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + + A V K+ PDT+ +++LI L G+V +A + + M +
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+V+TYN++++ C + AL LL+KMEE K D TY+ ++ CR +
Sbjct: 188 GCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L M + TY SLVRGL ++GK ++M+S+ IVP T+ +L +
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307
Query: 521 LEKK-RLGNAKERINKLLAHA 540
K+ +L A E +++
Sbjct: 308 FVKEGKLQEANELYKEMITRG 328
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 176/337 (52%), Gaps = 5/337 (1%)
Query: 182 ELVKEMDELNN-GY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
E++ +DE++N G+ T ++++ L R G A+E M + G + D + L+
Sbjct: 299 EVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLI 358
Query: 240 DTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
L K VE A ++ + +D P ++ +N LI CK +V++A + + + +G
Sbjct: 359 FGLCKLGEVEEAVEILNQMILRDFSP-NTVTYNTLISTLCKENQVEEATELARVLTSKGI 417
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
PDV ++ I+ C + R + +EM+ KGC P TY +++ +L ++ EAL
Sbjct: 418 LPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALS 477
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ ++M+S C + Y++LI K R+++A EIF++M+ QG+ NV+TYNT+I C
Sbjct: 478 LLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLC 537
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E A +L+ +M + KPD TY LL CR +K ++ M N D+
Sbjct: 538 KNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSV 597
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
TY +L+ GL ++G++ELA + KG+V TY
Sbjct: 598 TYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTY 634
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 99/386 (25%), Positives = 192/386 (49%), Gaps = 5/386 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++VL K L+ E+V + T + +++ L R + A+ M
Sbjct: 179 YNFLLNVLVDGNKLKLV-EIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEM 237
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
YG+ D + + LM ++ ++ A ++ + C P S+ N+L+HG+CK +
Sbjct: 238 GSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGC-PSSNVTVNVLVHGYCKEGR 296
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+++ + EM +GF PD ++ + CR + + L M ++G P + TY
Sbjct: 297 IEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNS 356
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K ++ EA+++ +M D P+T Y++LI L K +V++A E+ + +G
Sbjct: 357 LIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKG 416
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
++P+V T+N++I C + A++L ++M+ C PD TY L+ C + R++
Sbjct: 417 ILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEAL 476
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL M + S + TY +L+ G ++ ++E A F+EM +GI TY L + L
Sbjct: 477 SLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGL 536
Query: 522 -EKKRLGNAKERINKLLAHAKEQKTF 546
+ +R+ A + ++++L + F
Sbjct: 537 CKNRRVEEAAQLMDQMLMEGLKPDKF 562
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 193/408 (47%), Gaps = 15/408 (3%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE 189
+ LRR S++ WA Q ++ + +Y ++ LGK F M +++EM
Sbjct: 75 LRDALRRQSDE-DSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKH 133
Query: 190 LNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSV 248
+ T ++ + +D+AV M +++G++ D + L++ LV GN +
Sbjct: 134 -TGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKL 192
Query: 249 EHAYKVFLEFKDCIPLSSQI------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
+ +E + +S I FNILI C+ ++ A M+EM G SPD
Sbjct: 193 K-----LVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEK 247
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
++T ++ + E + ++M GC S +T +++H K +I E L ++M
Sbjct: 248 TFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEM 307
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
++ PD ++SL+ L + G VK A EI + M ++G P++ TYN++I C E
Sbjct: 308 SNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEV 367
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
E A+++L +M P+ TY L+ C++ +++ L + + D T+ SL
Sbjct: 368 EEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSL 427
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNA 529
++GL + LA FEEM +KG P TY ML + L + RL A
Sbjct: 428 IQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEA 475
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 114/462 (24%), Positives = 209/462 (45%), Gaps = 35/462 (7%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL 118
SPDE + G++E +N RI ++++ + + +L Y ++ E L
Sbjct: 243 SPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSS-NVTVNVLVHGYCKEGRIEEVL 301
Query: 119 KGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFC 178
S +++ SN+ G+ +N++V+ L +
Sbjct: 302 ---------SFIDE----MSNE---------------GFRPDRFTFNSLVNGLCRIGHVK 333
Query: 179 LMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
E++ M L G+ + T ++++ L + G ++AVE M +T +
Sbjct: 334 HALEILDVM--LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNT 391
Query: 238 LMDTLVKGNSVEHAYKV--FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
L+ TL K N VE A ++ L K +P FN LI G C T A + +EM +
Sbjct: 392 LISTLCKENQVEEATELARVLTSKGILP-DVCTFNSLIQGLCLTNNHRLAMELFEEMKTK 450
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G PD +Y I+ C + LKEM+ GC +V+TY ++ K K+I EA
Sbjct: 451 GCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEA 510
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+++++M+ + Y++LI L K RV++A ++ + M +G+ P+ TYN++++
Sbjct: 511 EEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTY 570
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C + + A ++Q M + C+PD TY L+ + R+++ + LL + + +
Sbjct: 571 FCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLA 630
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
TY +++ L + A F EM+ KG P TYK++
Sbjct: 631 PQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVV 672
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 163/361 (45%), Gaps = 40/361 (11%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++ L K + EL + + + G + + T +++++ L + A+E F
Sbjct: 389 YNTLISTLCKENQVEEATELARVLT--SKGILPDVCTFNSLIQGLCLTNNHRLAMELFEE 446
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
MK G D ++L+D+L +E A + +E C + +N LI G+CK +
Sbjct: 447 MKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGC-SRNVVTYNTLIDGFCKNK 505
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++++A++ EM QG S +VV+Y I+ C+ + + + +M +G KP TY
Sbjct: 506 RIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYN 565
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ +A I +A + + M S+ C PD+ Y +LI LSKAGRV+ A+ + ++ +
Sbjct: 566 SLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLK 625
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+V TYN +I + A++L ++M E PD TY + + C
Sbjct: 626 GMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSG------ 679
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
G + A F EM KG +P S++ ML E
Sbjct: 680 ----------------------------GGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEG 711
Query: 521 L 521
L
Sbjct: 712 L 712
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 162/354 (45%), Gaps = 5/354 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
T G + +N+++ L + L EL +EM + + T + ++ L GR
Sbjct: 413 TSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEM-KTKGCHPDEFTYNMLIDSLCSRGR 471
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNI 271
++A+ + M+ G ++ + L+D K +E A ++F E + I + +N
Sbjct: 472 LEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNT 531
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G CK R+V++A + M +M +G PD +Y + ++CR D +K D ++ M G
Sbjct: 532 LIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNG 591
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C+P +TY ++ L KA ++ A ++ ++ + Y+ +I L + R +A
Sbjct: 592 CEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAV 651
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEE-ENALKLLQKMEEDLCKPDCETYAPLLKM 450
+F +M ++G P+ +TY + C+ A+ L +M + PD ++ L +
Sbjct: 652 RLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEG 711
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
C L L+ + K D + S++ G ++ K + A + ++S
Sbjct: 712 LCALSMEDTLIKLVNRVMKQANFSD--SEVSMIMGFLKIRKFQDALATLGRILS 763
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%), Gaps = 3/244 (1%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q F P V Y + ++ F + L+EM+ GC+ T+ I++ + K + +
Sbjct: 98 QPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFD 157
Query: 354 EALKVYEKMKSDDCLPDTSF-YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
EA+ V + M+ + L +F Y+ L+ +L ++K + M +G+ P+V T+N +
Sbjct: 158 EAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNIL 217
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
I + C + A+ ++++M PD +T+ L++ + M + M
Sbjct: 218 IKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGC 277
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKER 532
T LV G + G++E SF +EM ++G P T+ L L R+G+ K
Sbjct: 278 PSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGL--CRIGHVKHA 335
Query: 533 INKL 536
+ L
Sbjct: 336 LEIL 339
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 77/179 (43%), Gaps = 1/179 (0%)
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
K + +P + Y ++ L K G + ++MK G T+ +I S
Sbjct: 97 KQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELF 156
Query: 423 ENALKLLQKMEEDL-CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
+ A+ ++ MEE+ K D TY LL + ++K++ + + M + D T+
Sbjct: 157 DEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNI 216
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHA 540
L++ L + ++ A EEM S G+ P T+ L + ++ N RI + + A
Sbjct: 217 LIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAA 275
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 159 bits (402), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 100/329 (30%), Positives = 171/329 (51%), Gaps = 4/329 (1%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG-NSVEHAYKVFLEFKDC-IPL 264
LV G +A + F + YGV + ++ + L + + A++VF E+ + +
Sbjct: 191 LVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEVGVCW 250
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
++ +NI++H C+ KV +A + +M +G PDVVSY+ ++ YC+ + KV +
Sbjct: 251 NTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLM 310
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+E+Q KG KP+ TY ++ L K ++ EA +V MK+ PD Y++LI K+
Sbjct: 311 EELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKS 370
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G V ++F++MK++ +VP+ +TY +MI C + A KL +M KPD TY
Sbjct: 371 GNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTY 430
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ C+ MK L M + ++ + TY +LV GL + G++++A EM
Sbjct: 431 TALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSE 490
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
KG+ P TY L L K +GN ++ +
Sbjct: 491 KGLQPNVCTYNALINGLCK--VGNIEQAV 517
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 159/321 (49%), Gaps = 3/321 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++I+ L + GR +A + R MK + D + L+ K +V YK+F E
Sbjct: 324 TYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEM 383
Query: 259 K--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K +P + +IHG C+ KV +A+K EM +G PD V+YT I+ YC+ +
Sbjct: 384 KRKKIVP-DFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGE 442
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
++ +M EKG P+V+TYT ++ L K +++ A ++ +M P+ Y++
Sbjct: 443 MKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNA 502
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI L K G ++ A ++ E+M G P+ +TY T++ + C E A +LL+ M +
Sbjct: 503 LINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKG 562
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+P T+ L+ C ++ L+ M + +A T+ SL++ +
Sbjct: 563 LQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATI 622
Query: 497 SFFEEMISKGIVPYHSTYKML 517
++ M ++G+VP +TY +L
Sbjct: 623 EIYKGMHAQGVVPDTNTYNIL 643
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/360 (26%), Positives = 179/360 (49%), Gaps = 11/360 (3%)
Query: 161 PEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR-GGRYDDAVEA 219
P +++ VL ++ L+ E K D+L N Y L ++ + L R +D A
Sbjct: 181 PLVFDVFFQVLVEAG---LLLEAGKLFDKLLN-YGVLVSVDSCNLFLARLSNSFDGIRTA 236
Query: 220 FRGMKKY---GVEKDTRALSVLMDTLVKGNSVEHAYKVFL--EFKDCIPLSSQIFNILIH 274
FR ++Y GV +T + ++++ L + V+ A+ + + EF+ +P +++++
Sbjct: 237 FRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVP-DVVSYSVIVD 295
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C+ ++ K M+E+ ++G P+ +Y I C+ + + L+ M+ + P
Sbjct: 296 GYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFP 355
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ YT ++ GK+ ++ K++++MK +PD Y+S+I L +AG+V +A ++F
Sbjct: 356 DNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLF 415
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+M +G+ P+ +TY +I C E + A L +M E P+ TY L+ C+
Sbjct: 416 SEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKC 475
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ + N LL M + + + TY +L+ GL + G +E A EEM G P TY
Sbjct: 476 GEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITY 535
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 108/409 (26%), Positives = 183/409 (44%), Gaps = 6/409 (1%)
Query: 113 KVVEALKGCGVSVSNSLVEQTLRRFSND---LTPAFGFFTWAKTQTGYMHTPEMYNTMVD 169
K+ + L GV VS L R SN + AF F ++ G YN ++
Sbjct: 202 KLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFR-EYSEVGVCWNTVSYNIILH 260
Query: 170 VLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
+L + K L+ +M E + + S I+ + + ++ +++ G++
Sbjct: 261 LLCQLGKVKEAHSLLIQM-EFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLK 319
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKA 288
+ + ++ L K V A +V K+ I + ++ LI G+ K+ V K
Sbjct: 320 PNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKL 379
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
EM ++ PD V+YT I C+ + EM KG KP +TYT ++ K
Sbjct: 380 FDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCK 439
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
A ++ EA ++ +M P+ Y++L+ L K G V ANE+ +M ++G+ PNV T
Sbjct: 440 AGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCT 499
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YN +I+ C E A+KL+++M+ PD TY ++ C+ M + LL M
Sbjct: 500 YNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIML 559
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ T+ L+ G SG LE + M+ KGI+P +T+ L
Sbjct: 560 DKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSL 608
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 117/473 (24%), Positives = 225/473 (47%), Gaps = 53/473 (11%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
+++S + V +TLR D + A FF W + Q G+ HTPE Y M+++LG+ + +
Sbjct: 74 ITISKTTVLRTLR-LIKDPSKALRFFKWTQ-QKGFSHTPESYFIMLEILGRERNLNVARN 131
Query: 183 LVKEMDELNNGYVSLAT--MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
+ +++ + G V L ++++R G + ++++ F+ MK V + LM
Sbjct: 132 FLFSIEKHSKGTVKLEDRFFNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMS 191
Query: 241 TLVKGNSVEHAYKVFLEFKDCIPLSSQ--IFNILIHGWCKTRKVDDAQKAMKEMFQ---- 294
L+K A +V+ E +S +N+LI G+CK VD+ + +EM
Sbjct: 192 ILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCD 251
Query: 295 ---------------------------------QGFSPDVVSYTCFIEHYCREKDFRKVD 321
+G +P+VV+YT I YC +++ +
Sbjct: 252 ADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIRGYCMKQEVEEAL 311
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL-PDTSFYSSLIFI 380
L+EM +G KP++ITY ++ L +A ++++ V E+MKSD PDT ++++I +
Sbjct: 312 VVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHL 371
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM-EEDL--- 436
AG + +A ++FE MKK + + +Y+T+I S C + + + A +L ++ E+++
Sbjct: 372 HCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLS 431
Query: 437 ---CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
KP +Y P+ + C + K ++ + K + D +Y +++ G + G E
Sbjct: 432 KFGSKPLAASYNPIFESLCEHGKTKKAERVIRQLMKRG-TQDPQSYTTVIMGHCKEGAYE 490
Query: 494 LACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKLLAHAKEQKT 545
M+ + +P Y +++ L+K + AKE + K+L + + KT
Sbjct: 491 SGYELLMWMLRRDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKT 543
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/357 (21%), Positives = 156/357 (43%), Gaps = 14/357 (3%)
Query: 161 PEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
P M YNT+V L ++ K M ++++ M T +TI+ G D+A++
Sbjct: 324 PNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFSPDTFTFNTIIHLHCCAGNLDEALK 383
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLS-------SQIFN 270
F MKK+ + D+ + S L+ +L + + A ++F E F+ I LS + +N
Sbjct: 384 VFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASYN 443
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+ C+ K A++ ++++ ++G + D SYT I +C+E + + L M +
Sbjct: 444 PIFESLCEHGKTKKAERVIRQLMKRG-TQDPQSYTTVIMGHCKEGAYESGYELLMWMLRR 502
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P + Y ++ + + A + EKM P TS + S++ L + G ++
Sbjct: 503 DFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHES 562
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ + M ++ V N+ + R + E A +++ + ++ E A L
Sbjct: 563 SCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYYVKIEEVAQFL-- 620
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
++ ++ LL +N ++D + + L + K+ A S E++ G+
Sbjct: 621 -LKRGKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSLCYELVENGL 676
>gi|115475660|ref|NP_001061426.1| Os08g0272200 [Oryza sativa Japonica Group]
gi|37806221|dbj|BAC99723.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|37806377|dbj|BAC99889.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113623395|dbj|BAF23340.1| Os08g0272200 [Oryza sativa Japonica Group]
gi|125602810|gb|EAZ42135.1| hypothetical protein OsJ_26694 [Oryza sativa Japonica Group]
Length = 528
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 174/349 (49%), Gaps = 9/349 (2%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
E ++ + GK+++F L W +V+ M L G ++ M +M R + A++ F
Sbjct: 144 EAWHLTIWAAGKARRFDLAWAVVRRM--LRRGVLTSRAMVIVMERYAAANEVNKAIKTFD 201
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKT-R 280
M+K+ E D L+ L K ++E A ++ L K PL+++ FNI++ GWC
Sbjct: 202 AMEKFKTEADQTVFYSLLRALCKNKNIEDAEELLLVRKKFFPLTAEGFNIILDGWCNVIT 261
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ +A++ +EM +PD SYT + + + + EM+++G PS+ Y
Sbjct: 262 DIAEAKRIWREMSNYCITPDGTSYTLMVSCFAKVGNLFDTLRVYDEMKKRGWTPSIAVYN 321
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+++ L K + + ++ ++ + P+ Y+S+I L ++ ++ +A + EDM +
Sbjct: 322 SLIYVLTKENCMKDVQNIFTRIIDEGLQPNVKTYNSMIVPLCESRKLDEARMVLEDMMLK 381
Query: 401 GVVPNVLTYNTMISSACARSEE-ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G+VP +LTY+T + R E + LK L+KM++D C P +T+ L+ +
Sbjct: 382 GIVPTILTYHTFL-----RQENIDETLKFLKKMKDDGCGPKSDTFLMLIDRFFQLNEPGH 436
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
L M + D+ Y S+V+GLI+ G ++ A +++EM G
Sbjct: 437 ALKLWNEMKRYDIRPSYSHYMSVVQGLIKHGCMQRALEYYDEMKENGFA 485
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 190/391 (48%), Gaps = 16/391 (4%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE 189
V QTL F D + A FF WA+ + GY HT + Y +M+++LG+++ + +++
Sbjct: 82 VLQTLG-FLRDTSKALQFFNWAQ-EMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEK 139
Query: 190 LNNGYVSLAT--MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS 247
+ G V L +++MR R G + ++++ F MK +GV + L+ L+K
Sbjct: 140 RSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGR 199
Query: 248 VEHAYKVFLEFKDCIPLSSQ--IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
A KV+ E ++ FNILI G+C VDD + ++ + G PDVV+Y
Sbjct: 200 TNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYN 259
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGC--KPSVITYTIVMHALGKAKQINEALKVYEKMK 363
++ CR + +K M +K P+V+TYT ++ ++I +AL V+E+M
Sbjct: 260 TLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMV 319
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV-PNVLTYNTMISSACARSEE 422
+ + Y++LI L +A + + +I E G P+ T+NT++ C
Sbjct: 320 NQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNL 379
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA------ 476
++ALK+ ++M E +PD TY+ L++ C+ + LL + + + +
Sbjct: 380 DDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPL 439
Query: 477 -GTYASLVRGLIESGKLELACSFFEEMISKG 506
Y + + L E+GK + A F +++ +G
Sbjct: 440 VAAYNPIFKYLCETGKTKKAEKAFRQLMRRG 470
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/374 (25%), Positives = 166/374 (44%), Gaps = 56/374 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA----TMSTIMRRLVRGGRYDDAVEA 219
YNT++ L +++KF E +K++ E G + + T +T+M G DDA++
Sbjct: 330 YNTLIKGLCEARKF----EKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKV 385
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA---------YKVFLEFKDCIPLSSQIFN 270
F M + ++ D+ S L+ +L +G E A K+ L C PL + +N
Sbjct: 386 FERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAA-YN 444
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+ C+T K A+KA +++ ++G + D SY I +C+E F + L M K
Sbjct: 445 PIFKYLCETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRK 503
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P TY +++ L + AL+ EKM P++S + S++ L + GR ++
Sbjct: 504 DFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASES 563
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACAR-----SEEENALKLLQ---------KMEEDL 436
+ + M + + N+ S+ C R + A +L+ KMEE L
Sbjct: 564 ASLIQLMLDKNIRQNL-----SFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEE-L 617
Query: 437 CKPDCETYAPLLKMCCRK--KRMKVLNFLL-THMFKNDVSMDAGTYASLVRGLIESGKLE 493
+ C CRK + K+L F L +H F V MD +++ L E KL
Sbjct: 618 IRYLCH---------CRKVIQGSKLLLFSLESHQF---VDMDLCN--TVIFQLCEINKLS 663
Query: 494 LACSFFEEMISKGI 507
A S + +++ G+
Sbjct: 664 EAFSLYYKLVEMGV 677
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 44/260 (16%)
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEA---LKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
QE G + +Y ++ LG+ + +N A L EK + F++SL+ ++A
Sbjct: 103 QEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRA 162
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNT--------------------------------- 411
G +++ ++F MK GV P+V+T+N+
Sbjct: 163 GLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFT 222
Query: 412 ---MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
+I C ++ ++ + C+PD TY L+ CR ++ V ++ M
Sbjct: 223 FNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMG 282
Query: 469 KNDVSMDAG--TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
K V ++ TY +L+RG ++E A + FEEM+++G+ + TY L + L + R
Sbjct: 283 KKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEAR- 341
Query: 527 GNAKERINKLLAHAKEQKTF 546
E+I +L TF
Sbjct: 342 --KFEKIKDILEGTAGDGTF 359
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 104/391 (26%), Positives = 190/391 (48%), Gaps = 16/391 (4%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE 189
V QTL F D + A FF WA+ + GY HT + Y +M+++LG+++ + +++
Sbjct: 82 VLQTLG-FLRDTSKALQFFNWAQ-EMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEK 139
Query: 190 LNNGYVSLAT--MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS 247
+ G V L +++MR R G + ++++ F MK +GV + L+ L+K
Sbjct: 140 RSRGIVKLEARFFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGR 199
Query: 248 VEHAYKVFLEFKDCIPLSSQ--IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
A KV+ E ++ FNILI G+C VDD + ++ + G PDVV+Y
Sbjct: 200 TNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYN 259
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGC--KPSVITYTIVMHALGKAKQINEALKVYEKMK 363
++ CR + +K M +K P+V+TYT ++ ++I +AL V+E+M
Sbjct: 260 TLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMV 319
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV-PNVLTYNTMISSACARSEE 422
+ + Y++LI L +A + + +I E G P+ T+NT++ C
Sbjct: 320 NQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNL 379
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA------ 476
++ALK+ ++M E +PD TY+ L++ C+ + LL + + + +
Sbjct: 380 DDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPL 439
Query: 477 -GTYASLVRGLIESGKLELACSFFEEMISKG 506
Y + + L E+GK + A F +++ +G
Sbjct: 440 VAAYNPIFKYLCETGKTKKAEKAFRQLMRRG 470
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 158/366 (43%), Gaps = 37/366 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMD----ELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
YNT+VD L ++ K + + +VK M +LN V T +T++R + A+
Sbjct: 258 YNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVV---TYTTLIRGYCAKREIEKALAV 314
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ---------IFN 270
F M V + +A ++ +TL+KG + A K F + KD + ++ FN
Sbjct: 315 FEEM----VNQGLKANNITYNTLIKG--LCEARK-FEKIKDILEGTAGDGTFSPDTCTFN 367
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
L+H C +DDA K + M + PD +Y+ + C+ + K +D L ++ E+
Sbjct: 368 TLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLER 427
Query: 331 -------GCKPSVITYTIVMHAL---GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
GCKP V Y + L GK K+ +A + + + D P + Y +LI
Sbjct: 428 KILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQD--PPS--YKTLIMG 483
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
K G + E+ M ++ +P+ TY ++I+ + AL+ L+KM +P+
Sbjct: 484 HCKEGTFESGYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPN 543
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
T+ +L + R L+ M ++ + VR L +G + A
Sbjct: 544 SSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDKAFQLVH 603
Query: 501 EMISKG 506
+ KG
Sbjct: 604 LLYGKG 609
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 44/260 (16%)
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEA---LKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
QE G + +Y ++ LG+ + +N A L EK + F++SL+ ++A
Sbjct: 103 QEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKRSRGIVKLEARFFNSLMRNFNRA 162
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNT--------------------------------- 411
G +++ ++F MK GV P+V+T+N+
Sbjct: 163 GLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFT 222
Query: 412 ---MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
+I C ++ ++ + C+PD TY L+ CR ++ V ++ M
Sbjct: 223 FNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMG 282
Query: 469 KNDVSMDAG--TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
K V ++ TY +L+RG ++E A + FEEM+++G+ + TY L + L + R
Sbjct: 283 KKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEAR- 341
Query: 527 GNAKERINKLLAHAKEQKTF 546
E+I +L TF
Sbjct: 342 --KFEKIKDILEGTAGDGTF 359
>gi|297844848|ref|XP_002890305.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336147|gb|EFH66564.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 860
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 184/365 (50%), Gaps = 7/365 (1%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V+ +S +L + P EAL+ G+ + Q L++ ND A GFF W K Q G
Sbjct: 302 VENVSSVLRRFRWGP-AAEEALQNLGLRIDAYQANQVLKQM-NDYGNALGFFYWLKRQPG 359
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDD 215
+ H Y TMV LG++K+F + +L+ EM + +G + T + ++ R ++
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEM--VRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIH 274
A+ F M++ G + D L+D K ++ A ++ + + + ++++I+
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
K + A K EM QG +P++V+Y ++ + + ++++ ++MQ G +P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRDMQNAGFEP 537
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+TY+IVM LG + EA V+ +M+ + +PD Y L+ + KAG V+ A + +
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ M G++PNV T N+++S+ ++ A +LLQ M +P +TY LL CC
Sbjct: 598 QAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTD 656
Query: 455 KRMKV 459
R K+
Sbjct: 657 GRSKL 661
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 170/350 (48%), Gaps = 11/350 (3%)
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT-RALSVLMDTLVKGNSVE 249
N+GY+ + +S+++RR R+ A E ++ G+ D +A VL GN++
Sbjct: 297 NSGYI-VENVSSVLRRF----RWGPAAE--EALQNLGLRIDAYQANQVLKQMNDYGNALG 349
Query: 250 HAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
Y +L+ + + ++ + ++ K + EM + G P+ V+Y I
Sbjct: 350 FFY--WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIH 407
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
Y R + + +MQE GCKP +TY ++ KA ++ A+ +Y++M++ P
Sbjct: 408 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
DT YS +I L KAG + A+++F +M QG PN++TYN M+ ++ALKL
Sbjct: 468 DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQSALKLY 527
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ M+ +PD TY+ ++++ ++ + T M + + D Y LV ++
Sbjct: 528 RDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 490 GKLELACSFFEEMISKGIVPYHST-YKMLEEKLEKKRLGNAKERINKLLA 538
G +E A +++ M+ G++P T +L L ++ A E + +LA
Sbjct: 588 GNVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA 637
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 118/282 (41%), Gaps = 41/282 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ +++ LGK+ +L EM ++ G +L T + +M + Y A++ +R
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEM--VDQGCTPNLVTYNIMMDLHAKARNYQSALKLYRD 529
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M+ G E D S++M+ L +E A VF E K+ IP ++ +L+ W K
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP-DEPVYGLLVDLWGKAG 588
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V+ A + + M G P+V + + + R + + L+ M G +PS+ TYT
Sbjct: 589 NVEKAWQWYQAMLHAGLLPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 341 IVMHA---------LGKAKQI--------------------------NEALKVYEKMKSD 365
+++ +G Q+ N A + M S+
Sbjct: 649 LLLSCCTDGRSKLDMGYCGQLMASTGHPAHMFLLKMPAAGPNGENVRNHANNFLDLMHSE 708
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
D +++ L K+G+ ++A ++E ++ V P+ L
Sbjct: 709 DRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
>gi|15237375|ref|NP_199422.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171880|sp|Q9FNL2.1|PP418_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g46100
gi|9757730|dbj|BAB08255.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332007954|gb|AED95337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 472
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 126/449 (28%), Positives = 206/449 (45%), Gaps = 53/449 (11%)
Query: 134 LRRFSNDLTPAFGFFTWAKTQ--TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN 191
L R D+ + F A + GY+H + MV L + KF +L+ M ++
Sbjct: 22 LMRAEKDVEKSMAVFDSATAEYANGYVHDQSSFGYMVLRLVSANKFKAAEDLIVRM-KIE 80
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
N VS + +I R R R D++ F MK + + +A ++ LV+ N + A
Sbjct: 81 NCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLA 140
Query: 252 YKVFLEFKDC-IPLSSQIFNILIHGWCKT-RKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+K + ++ +P + N+LI C+ VD K EM ++G PD +Y I
Sbjct: 141 FKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFLEMPKRGCDPDSYTYGTLIS 200
Query: 310 HYCREKDFRKVDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
CR F ++D+ K EM EK C P+V+TYT +++ L +K ++EA++ E+MKS
Sbjct: 201 GLCR---FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYLEEMKSKG 257
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
P+ YSSL+ L K GR A E+FE M +G PN++TY T+I+ C + + A+
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAV 317
Query: 427 KLLQKMEEDLCKPDCETYAPLLK-MCCRKKRMKVLNFL------------LT-------- 465
+LL +M KPD Y ++ C K + NFL LT
Sbjct: 318 ELLDRMNLQGLKPDAGLYGKVISGFCAISKFREAANFLDEMILGGITPNRLTWNIHVKTS 377
Query: 466 --------------------HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
M +S++ T SLV+ L + G+ + A +E+++
Sbjct: 378 NEVVRGLCANYPSRAFTLYLSMRSRGISVEVETLESLVKCLCKKGEFQKAVQLVDEIVTD 437
Query: 506 GIVPYHSTYKML-EEKLEKKRLGNAKERI 533
G +P T+K+L L+K +G A + +
Sbjct: 438 GCIPSKGTWKLLIGHTLDKTIVGEASDTL 466
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 2/213 (0%)
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
+M++ C PS Y V+ L + Q+N A K Y+ M+ P + + LI L +
Sbjct: 111 KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRND 170
Query: 386 RVKDAN-EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
DA +IF +M K+G P+ TY T+IS C + A KL +M E C P TY
Sbjct: 171 GTVDAGLKIFLEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ C K + L M + + TY+SL+ GL + G+ A FE M++
Sbjct: 231 TSLINGLCGSKNVDEAMRYLEEMKSKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 505 KGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
+G P TY L L +++++ A E ++++
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 789
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 117/422 (27%), Positives = 199/422 (47%), Gaps = 15/422 (3%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWEL 183
S+ SLV LR +++ A FF WA Q Y H P +Y T++DVL K+ K C
Sbjct: 160 SLKPSLVCAVLRSQADERV-ALNFFYWADRQWRYSHHPLVYYTLLDVLSKT-KLCQGARR 217
Query: 184 VKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
V + +S +M R G+ +A+ M+K GVE + + + LV
Sbjct: 218 VLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLV 277
Query: 244 KGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
KG +E A + FLE + I +N LI G+C +++DA + + + +G PD
Sbjct: 278 KGCKLEKALR-FLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDK 336
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
VSY + C+EK +V +++M Q+ P +TY ++H L K ++AL +
Sbjct: 337 VSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLK 396
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+ + D YS+++ + GR+ +A + DM + P+V+TY ++ C
Sbjct: 397 EAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLG 456
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR----MKVLNFLLTHMFKNDVSMDA 476
+ A K+LQ+M + CKP+ +Y LL C + +++N H + + +A
Sbjct: 457 RIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWW----TPNA 512
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINK 535
TY ++ G GKL AC EM+ KG P +L + L + +++ AK+ + +
Sbjct: 513 ITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEE 572
Query: 536 LL 537
L
Sbjct: 573 CL 574
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/384 (23%), Positives = 177/384 (46%), Gaps = 14/384 (3%)
Query: 164 YNTMVDVLGKSKKF----CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
Y T++ L K KK CLM ++V++ +N T +T++ L + G DDA+
Sbjct: 339 YYTVMGFLCKEKKIEQVKCLMEKMVQD----SNLIPDQVTYNTLIHMLSKHGHADDALAF 394
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWC 277
+ + G D S ++ + + ++ A + ++ + C P + ++ G+C
Sbjct: 395 LKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNP-DVVTYTAIVDGFC 453
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ ++D+A+K +++M++ G P+ VSYT + C + + + +E P+ I
Sbjct: 454 RLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAI 513
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY +VMH + +++EA + +M P + LI L + +V +A + E+
Sbjct: 514 TYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEEC 573
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+G NV+ + T+I C + E AL +L+ M PD TY L +K R+
Sbjct: 574 LNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRL 633
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L+ M + T+ S++ + G+++ + + M+ + P+ + Y +
Sbjct: 634 DEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKRK--PFRTIYNHV 691
Query: 518 EEKL-EKKRLGNAKERINKLLAHA 540
EKL + L A++ + K+L A
Sbjct: 692 IEKLCDFGNLEEAEKLLGKVLRTA 715
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 146/345 (42%), Gaps = 34/345 (9%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGNSVEHAYKVF 255
+ T + I+ R GR D+A + + M K+G + +T + + L++ L G S+E +
Sbjct: 442 VVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN 501
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ + ++ + +++HG+ + K+ +A +EM ++GF P V I+ C+ +
Sbjct: 502 VSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 561
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ L+E KGC +V+ +T V+H + + AL V E M + PD Y+
Sbjct: 562 KVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYT 621
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT--------------------------- 408
+L L K GR+ +A E+ M +G+ P +T
Sbjct: 622 ALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFRSVIHRYCQWGRVDDMLNLLDRMVKR 681
Query: 409 ------YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
YN +I C E A KLL K+ K D T L++ C +K
Sbjct: 682 KPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRTASKLDANTCHVLMESCLKKGVALSAYK 741
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ MF+ +++ D + + L+ G L A + +GI
Sbjct: 742 VACQMFRRNLTPDLKLCEKVTKKLVLDGNLVEADKLMLRFVERGI 786
>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 793
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 115/410 (28%), Positives = 189/410 (46%), Gaps = 14/410 (3%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
R D A FF WA Q Y H P +Y TM+DVL K+ K C V +
Sbjct: 175 RSQADERVALNFFYWADRQWRYSHHPVVYYTMLDVLSKT-KLCQGARRVLRLMTRRGIEC 233
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+M R G+ +A+ M+K GVE + + LVKG +E A K F
Sbjct: 234 PPEAFGYVMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALK-F 292
Query: 256 LEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
LE + I +N LI G+C +++DA + + + +G PD VSY + C+
Sbjct: 293 LERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCK 352
Query: 314 EKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
EK +V +++M P +TY ++H L K ++AL ++ + D
Sbjct: 353 EKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKV 412
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
YS+++ + GR+ +A + DM +G P+V+TY ++ C + A K+LQ+M
Sbjct: 413 GYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQM 472
Query: 433 EEDLCKPDCETYAPLLKMCCRKKR----MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+ CKP+ +Y LL C + +++N H + + +A TY +++ GL
Sbjct: 473 YKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWW----TPNAITYGAVMHGLRR 528
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLL 537
GKL AC EM+ KG P +L + L + +++ AK+ + + L
Sbjct: 529 EGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECL 578
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 132/250 (52%), Gaps = 6/250 (2%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
++ ++H +C+ ++D+A+ + +M+ +G +PDVV+YT ++ +CR + L++M
Sbjct: 414 YSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMY 473
Query: 329 EKGCKPSVITYTIVMHAL---GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
+ GCKP+ ++YT +++ L GK+ + E + V E+ P+ Y +++ L + G
Sbjct: 474 KHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWT---PNAITYGAVMHGLRREG 530
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
++ +A ++ +M ++G P + N +I S C + A K L++ C + +
Sbjct: 531 KLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFT 590
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
++ C+ M+ +L M+ + DA TY +L L + G+L+ A +M+SK
Sbjct: 591 TVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSK 650
Query: 506 GIVPYHSTYK 515
G+ P TY+
Sbjct: 651 GLDPTPVTYR 660
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 150/347 (43%), Gaps = 38/347 (10%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGNSVE------ 249
+ T + I+ R GR D+A + + M K+G + +T + + L++ L G S+E
Sbjct: 446 VVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMIN 505
Query: 250 ------------------HAYKVFLEFKDCIPLSSQI-----------FNILIHGWCKTR 280
H + + + L+ ++ N+LI C+ +
Sbjct: 506 VSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQ 565
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
KV +A+K ++E +G + +VV++T I +C+ D L +M G P +TYT
Sbjct: 566 KVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYT 625
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+ ALGK +++EA ++ KM S P Y S+I S+ GRV D + E M K+
Sbjct: 626 ALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYRSVIHRYSQWGRVDDMLNLLEKMLKR 685
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
P YN +I C E A KLL K+ K D T L++ +K
Sbjct: 686 Q--PFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISA 743
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ MF+ +++ D + + L+ GKL A + + +GI
Sbjct: 744 YKVACRMFRRNLTPDLKLCEKVSKKLVLDGKLVEADNLMLRFVERGI 790
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 186/359 (51%), Gaps = 10/359 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV---SLATMSTIMRRLVRGGRYDDAVEAF 220
Y T+++ L K + +L++ +D G + ++ +TI+ + + ++A + +
Sbjct: 180 YGTLINGLCKVGQTSAALQLLRRVD----GKLVQPNVVMYNTIIDSMCKVKLVNEAFDLY 235
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCK 278
M G+ D + L+ ++ A +F + F++ P + FNIL+ G+CK
Sbjct: 236 SEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINP-NVYTFNILVDGFCK 294
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R++ +A+ + M +QG PDV +Y ++ YC K+ K + ++G P++ +
Sbjct: 295 ERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHS 354
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y+I++H K K+++EA+ ++++M ++ +PD Y+SLI L K G++ A ++ ++M
Sbjct: 355 YSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMH 414
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+GV + +TYN+++ + C + + A+ LL KM+++ +PD TY L+ C+ R++
Sbjct: 415 DRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLE 474
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + +D Y ++++G G + + +M G +P TY+++
Sbjct: 475 DARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEII 533
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 157/366 (42%), Gaps = 36/366 (9%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD--------------- 240
S+ I+ LV+ Y V R M+ G+ D LS+L++
Sbjct: 71 SIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVL 130
Query: 241 ----------------TLVKGNSVEHAYKVFLEFKDCIP-----LSSQIFNILIHGWCKT 279
TL+KG ++ L+F D + L+ + LI+G CK
Sbjct: 131 AKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKV 190
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+ A + ++ + + P+VV Y I+ C+ K + D EM KG P V+TY
Sbjct: 191 GQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTY 250
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ ++ +A ++ KM ++ P+ ++ L+ K R+K+A + M K
Sbjct: 251 NALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMK 310
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
QG+ P+V TYN+++ C E A + + + P+ +Y+ ++ C+ K++
Sbjct: 311 QGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDE 370
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L M N++ D TY SL+ GL + GK+ A +EM +G+ TY + +
Sbjct: 371 AMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILD 430
Query: 520 KLEKKR 525
L K
Sbjct: 431 ALCKNH 436
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 133/298 (44%), Gaps = 43/298 (14%)
Query: 177 FCLMWELVKEMDELN-----NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
FC++ ++ D N N ++ T + ++ + R +A M K G++ D
Sbjct: 257 FCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPD 316
Query: 232 TRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ LMD V A +F + + P + ++I+IHG+CK +KVD+A
Sbjct: 317 VFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNP-NIHSYSIMIHGFCKIKKVDEAMNLF 375
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
KEM PDVV+Y I+ C+ + EM ++G ITY ++ AL K
Sbjct: 376 KEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKN 435
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED------------- 396
Q+++A+ + KMK + PD Y++L+ L K GR++DA +FED
Sbjct: 436 HQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIY 495
Query: 397 ----------------------MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
M++ G +PN +TY +I S + E + A KLL++M
Sbjct: 496 TAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 107/245 (43%), Gaps = 12/245 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELN-----NGYVSLATMSTIMRRLVRGGRYDDAVE 218
YN+++D ++CL+ E+ K N ++ + S ++ + + D+A+
Sbjct: 320 YNSLMD------RYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMN 373
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWC 277
F+ M + D + L+D L K + +A K+ E D +P +N ++ C
Sbjct: 374 LFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALC 433
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K +VD A + +M +G PD+ +YT ++ C+ +++ KG V
Sbjct: 434 KNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVN 493
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
YT ++ +E+L + KM+ + C+P+ Y +I L A ++ +M
Sbjct: 494 IYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREM 553
Query: 398 KKQGV 402
+G+
Sbjct: 554 ITRGL 558
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 114/256 (44%), Gaps = 1/256 (0%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
+ Q+ P + + + + + V ++M+ G ++ +I+++ + Q
Sbjct: 63 LHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFSQLGQ 122
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+ V K+ P+ ++LI L G++ A + + + G N ++Y T
Sbjct: 123 NPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGT 182
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I+ C + AL+LL++++ L +P+ Y ++ C+ K + L + M
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAK 530
+S D TY +L+ G GK++ A F +MI + I P T+ +L + +++RL AK
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302
Query: 531 ERINKLLAHAKEQKTF 546
+ ++ + F
Sbjct: 303 NVLAMMMKQGIKPDVF 318
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 192/402 (47%), Gaps = 15/402 (3%)
Query: 147 FFTWAKTQTGYMHTPEMY-----------NTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
F +TQ ++ EM+ N M++VL K K E + M+ L
Sbjct: 191 FLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVK-P 249
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T +TI+ G++ A F+ MK G+E D + + L K +E A +
Sbjct: 250 NVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLI 309
Query: 256 LEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ + +P ++ +N LI G+C +D A EM +G +V+Y FI
Sbjct: 310 CKMLEGGLVP-NAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFM 368
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E D+ +KEM+EKG P +T+ I+++ + A + ++M P
Sbjct: 369 EGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVT 428
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+SLI++L K R+K+A+ +F ++++G++P+++ +N +I CA + A +LL++M+
Sbjct: 429 YTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMD 488
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
PD TY L++ CR+ +++ LL M + + D +Y +L+ G + G ++
Sbjct: 489 NMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMK 548
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
A +EM++ G P TY L + L K + G E + K
Sbjct: 549 DAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLK 590
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 164/354 (46%), Gaps = 42/354 (11%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNIL 272
++A+E F +K+ G + + ++ +K N + A+ ++ E F+ I S FNI+
Sbjct: 163 NEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIM 222
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I+ CK K+ A++ + M G P+VV+Y I +C F++ + M++KG
Sbjct: 223 INVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGL 282
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI-------------- 378
+P TY + L K ++ EA + KM +P+ Y++LI
Sbjct: 283 EPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYA 342
Query: 379 -------------------FI--LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
FI L GR+ DA+ + ++M+++G++P+ +T+N +I+ C
Sbjct: 343 YRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYC 402
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
+ + A LL +M +P TY L+ + ++ RMK + L + + + + D
Sbjct: 403 RCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDII 462
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML------EEKLEKKR 525
+ +L+ G +G ++ A +EM + ++P TY L E K+E+ R
Sbjct: 463 VFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEAR 516
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 121/256 (47%), Gaps = 1/256 (0%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
SL T + + L GR DA + M++ G+ D ++L++ + + A+ +
Sbjct: 354 ASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGL 413
Query: 255 FLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E I + + LI+ K ++ +A ++ Q+G PD++ + I+ +C
Sbjct: 414 LDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCA 473
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + LKEM P ITY +M + ++ EA ++ ++MK PD
Sbjct: 474 NGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHIS 533
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI SK G +KDA + ++M G P +LTYN +I C E E+A +LL++M
Sbjct: 534 YNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMV 593
Query: 434 EDLCKPDCETYAPLLK 449
PD TY +++
Sbjct: 594 SKGITPDDSTYLSIIE 609
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 118/234 (50%), Gaps = 1/234 (0%)
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
+ + YC K + + ++EKG P++ T ++ K + A +Y +M
Sbjct: 149 FDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMF 208
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
+ ++ +I +L K G++K A E M+ GV PNV+TYNT+I C R + +
Sbjct: 209 RMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQ 268
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A + Q M++ +PDC TY + C++ R++ + L+ M + + +A TY +L+
Sbjct: 269 RARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALI 328
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
G G L+ A ++ +EMISKGI+ TY + L + R+G+A I ++
Sbjct: 329 DGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEM 382
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 122/266 (45%), Gaps = 12/266 (4%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG-GRYD 214
G M + YN + L + ++KEM E G + A I L+ G R
Sbjct: 351 GIMASLVTYNLFIHALFMEGRMGDADNMIKEMRE--KGMMPDAVTHNI---LINGYCRCG 405
Query: 215 DAVEAF---RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIF 269
DA AF M G++ + L+ L K N ++ A +F ++ + +P +F
Sbjct: 406 DAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLP-DIIVF 464
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N LI G C +D A + +KEM PD ++Y ++ YCRE + L EM+
Sbjct: 465 NALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKR 524
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+G KP I+Y ++ K + +A +V ++M + P Y++LI L K +
Sbjct: 525 RGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEH 584
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISS 415
A E+ ++M +G+ P+ TY ++I +
Sbjct: 585 AEELLKEMVSKGITPDDSTYLSIIEA 610
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 103/263 (39%), Gaps = 27/263 (10%)
Query: 91 ENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTW 150
E D D + K + ++ PD V N L+ R D AFG
Sbjct: 369 EGRMGDADNMIKEMREKGMMPDAVTH----------NILINGYCR--CGDAKRAFGLLD- 415
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM--RRLV 208
G T Y +++ VLGK + +KE D L + + I+ L+
Sbjct: 416 EMVGKGIQPTLVTYTSLIYVLGKRNR-------MKEADALFSKIQQEGLLPDIIVFNALI 468
Query: 209 RG----GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIP 263
G G D A + + M V D + LM + VE A ++ E K I
Sbjct: 469 DGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIK 528
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+N LI G+ K + DA + EM GF P +++Y I+ C+ ++ ++
Sbjct: 529 PDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEEL 588
Query: 324 LKEMQEKGCKPSVITYTIVMHAL 346
LKEM KG P TY ++ A+
Sbjct: 589 LKEMVSKGITPDDSTYLSIIEAM 611
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 2/170 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q G + ++N ++D + ++L+KEMD + T +T+M+ R G+
Sbjct: 454 QEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKV-LPDEITYNTLMQGYCREGKV 512
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNIL 272
++A + MK+ G++ D + + L+ K ++ A++V E + +N L
Sbjct: 513 EEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNAL 572
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
I G CK ++ + A++ +KEM +G +PD +Y IE D DD
Sbjct: 573 IQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAMETVDDLEGNDD 622
>gi|449455613|ref|XP_004145547.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like [Cucumis sativus]
Length = 572
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/427 (26%), Positives = 196/427 (45%), Gaps = 8/427 (1%)
Query: 98 DKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGY 157
+K+ + ++ + AL V +S +V + L S FF WA Q
Sbjct: 115 EKLRGVFLQKLNGKTAIEHALANTDVILSQDVVSKVLNTGSLGSEAMVTFFYWAIKQPSI 174
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
YN ++ LG+ F M +++ M +L +S ++ LV+G + A+
Sbjct: 175 PKDASSYNIILKALGRRGFFDSMMDVLYNMTR-EGVEATLEMVSIVVDSLVKGHQVSKAL 233
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
+ FR +K+ G++ DT L++L+ + + + V A F K IP + +NI+I GW
Sbjct: 234 QFFRNLKEIGLKCDTETLNILLQCMCRRSHVGAANSFFNLTKGNIPFNVMTYNIVIGGWS 293
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKP 334
+ + + ++ +K M GFSPD +++T IE R ++DD +K +M E GC P
Sbjct: 294 RYGRHGEVEQMLKAMELDGFSPDCLTHTYLIECLGRAN---QIDDAVKIFDKMDENGCTP 350
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
V Y ++ ++ L YE+M S+ C PD + YS+LI KA +V DA E+F
Sbjct: 351 DVDAYNAMISNFICIGDFDQCLTYYERMLSNRCEPDMNTYSNLITGFLKAKKVADALEMF 410
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M + ++P + I +C+ A+ + +K + C+ Y LL
Sbjct: 411 DEMVAR-IIPTTGAITSFIQLSCSYGPPHAAMLIYKKARKVGCRISKNAYKLLLMRLSLF 469
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ +L + M ++ D TY + L ++G+LE A EE + +G P T
Sbjct: 470 GKFGMLLNIWNEMQESGYDPDVETYEHAIDCLCKTGQLENAVLVMEECLRQGFFPSRRTR 529
Query: 515 KMLEEKL 521
L KL
Sbjct: 530 SKLNNKL 536
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 132/315 (41%), Gaps = 9/315 (2%)
Query: 121 CGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLM 180
C N L++ RR + + A FF K + YN ++ + + +
Sbjct: 246 CDTETLNILLQCMCRR--SHVGAANSFFNLTKGNIPF--NVMTYNIVIGGWSRYGRHGEV 301
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
+++K M EL+ T + ++ L R + DDAV+ F M + G D A + ++
Sbjct: 302 EQMLKAM-ELDGFSPDCLTHTYLIECLGRANQIDDAVKIFDKMDENGCTPDVDAYNAMIS 360
Query: 241 TLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
+ + + + C P ++ LI G+ K +KV DA + EM +
Sbjct: 361 NFICIGDFDQCLTYYERMLSNRCEP-DMNTYSNLITGFLKAKKVADALEMFDEMVAR-II 418
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P + T FI+ C K+ ++ GC+ S Y +++ L + L +
Sbjct: 419 PTTGAITSFIQLSCSYGPPHAAMLIYKKARKVGCRISKNAYKLLLMRLSLFGKFGMLLNI 478
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+ +M+ PD Y I L K G++++A + E+ +QG P+ T + + + A
Sbjct: 479 WNEMQESGYDPDVETYEHAIDCLCKTGQLENAVLVMEECLRQGFFPSRRTRSKLNNKLLA 538
Query: 419 RSEEENALKLLQKME 433
+ E A KL K++
Sbjct: 539 CNRTEMAYKLWLKIK 553
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 195/391 (49%), Gaps = 10/391 (2%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWEL 183
S V + L + ND A FF W + ++G+ HT E +N M+D+LGK +F W L
Sbjct: 4 SYDQKTVCEALSCYINDWQKALEFFNWVEKESGFRHTTETFNRMIDILGKYFEFETCWAL 63
Query: 184 VKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
+ M + T + +R V +A++A+ + + + DT + L+D L
Sbjct: 64 INRMIGNPESLPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDDFNLRDDT-SFYNLVDALC 122
Query: 244 KGNSVEHAYKVFLEFKDCIP-----LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
+ V A ++ K+ I +++I N+++ GW K ++ +M +G
Sbjct: 123 EHKHVVEAEELCFG-KNVIAHGFSVSNTKIHNLILRGWSKLGWWGKCKEYWDKMDTEGVP 181
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
D+ SY+ +++ C+ K KEM+ + K V+ Y V+ A+G ++ + ++V
Sbjct: 182 KDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFGIRV 241
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+ +M+ C P+ + ++++I +L + GR++DA + ++M K+G P+ ++Y + S
Sbjct: 242 FREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKKGCQPDSISYMCLFSRLEK 301
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
SE L L +M +P +TY L++ R ++ + ++ M ++ + D+
Sbjct: 302 PSE---ILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAA 358
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVP 509
Y +++ LI+ G L++A + EEMI +G+ P
Sbjct: 359 YNAVIDALIQKGMLDMAREYEEEMIERGLSP 389
>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 737
Score = 158 bits (400), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 113/404 (27%), Positives = 189/404 (46%), Gaps = 20/404 (4%)
Query: 124 SVSNSLVEQTLRRFSNDLTP---------------AFGFFTWAKTQTGYMHTPEMYNTMV 168
S N+ +E LRR L P A FF WA Q Y H P +Y M+
Sbjct: 84 SAWNAKLEGDLRRLLRSLKPRQVCAVLQLQSDERIALDFFYWAGRQWRYRHDPIVYYMML 143
Query: 169 DVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV 228
VL K+ K C V + + +M R G+ +A++ M+K GV
Sbjct: 144 QVLSKT-KLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGV 202
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQ 286
E + + + LV N +E A + FLE + ++ + +N LI G+C +V+ A
Sbjct: 203 EPNLLICNTAIHVLVMANKLEKALR-FLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAM 261
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHA 345
+ + EM +G PD VSY + C++K ++V + +++M ++ P +TY ++H
Sbjct: 262 ELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHM 321
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
L K +EAL+ + + D YS+++ GR+ A EI +M +G P+
Sbjct: 322 LSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPD 381
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
V+TY +++ C + E A K+LQ+M + CKP+ +Y LL C+ ++
Sbjct: 382 VVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMN 441
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
++ + +A TY+ ++ GL GKL AC EM++KG P
Sbjct: 442 TSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFP 485
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/381 (22%), Positives = 176/381 (46%), Gaps = 39/381 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ L + K+ + L+++M + N + T +T++ L + G D+A+E R
Sbjct: 279 YYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRET 338
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
++ G + D S ++++ +C ++D
Sbjct: 339 EERGFQVDKVGYSAIVNS----------------------------------FCMQGRMD 364
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A++ + EM +G SPDVV+YT + C+ + L++M + GCKP+ ++YT ++
Sbjct: 365 RAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALL 424
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ L + EA ++ + D P+ YS ++ L + G++ +A ++ +M +G
Sbjct: 425 NGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFF 484
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P + N +I S C + A K +++ C + + ++ C+ + L
Sbjct: 485 PTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSL 544
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
L M+ N+ DA T+ +++ L + G++E A + +M+ KG+ P TY+ + + K
Sbjct: 545 LDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCK 604
Query: 524 KRLGNAKERI---NKLLAHAK 541
+G +E I K+L+ +K
Sbjct: 605 --MGRVEELIKLLGKMLSRSK 623
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 160/354 (45%), Gaps = 40/354 (11%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVF 255
+ T + ++ L + G+ ++A + + M K+G + +T + + L++ L + GNS+E +
Sbjct: 382 VVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMN 441
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+D ++ +++++HG + K+ +A ++EM +GF P V I+ C E+
Sbjct: 442 TSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQ 501
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ ++E +GC + + +T V+H ++ I+ AL + + M ++ PD ++
Sbjct: 502 KMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFT 561
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
++I L K GR+++A M K+G+ P +TY +I C E +KLL KM
Sbjct: 562 AIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKM--- 618
Query: 436 LCKPDCET-YAPLLKMCCR----KKRMKVLNFLL-------------------------- 464
L + C T Y +++ C + KV+ +L
Sbjct: 619 LSRSKCRTAYNQVIEKLCNFGNPEAADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLS 678
Query: 465 -----THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
MF ++ D L + L+ GKLE A + + + +G + S+
Sbjct: 679 AYKVACRMFDRNLIPDLKLCEKLSKKLVLEGKLEEADNLMLQFVQRGNISPDSS 732
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 115/257 (44%), Gaps = 1/257 (0%)
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
I + F ++ + + K+ +A + + M + G P+++ I K
Sbjct: 167 IARRPEAFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKAL 226
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L+ MQ G P+V+TY ++ Q+ A+++ +M C PD Y +++ L
Sbjct: 227 RFLERMQLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFL 286
Query: 382 SKAGRVKDANEIFEDM-KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ R+K+ + E M K + P+ +TYNT++ + AL+ L++ EE + D
Sbjct: 287 CQDKRIKEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVD 346
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
Y+ ++ C + RM ++ M S D TY ++V GL + GK+E A +
Sbjct: 347 KVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQ 406
Query: 501 EMISKGIVPYHSTYKML 517
+M G P +Y L
Sbjct: 407 QMYKHGCKPNTVSYTAL 423
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 2/202 (0%)
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
+ VM + +A ++ A++V M+ P+ ++ I +L A +++ A E M
Sbjct: 173 AFAHVMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERM 232
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ G+ PNV+TYN +I C + E+A++L+ +M C PD +Y ++ C+ KR+
Sbjct: 233 QLVGITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRI 292
Query: 458 KVLNFLLTHMFK-NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
K + L+ M K N + D TY +LV L + G + A F E +G Y
Sbjct: 293 KEVRNLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSA 352
Query: 517 LEEKL-EKKRLGNAKERINKLL 537
+ + R+ AKE +N+++
Sbjct: 353 IVNSFCMQGRMDRAKEIVNEMI 374
>gi|356547448|ref|XP_003542124.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Glycine max]
Length = 445
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 103/388 (26%), Positives = 195/388 (50%), Gaps = 12/388 (3%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAK-TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD 188
V QTL F+ND A FF W + + + + H+ + +N M+D+LGK +F L W+L++ M+
Sbjct: 37 VRQTLLSFNNDWKRALEFFNWVEESHSQFHHSTDTFNLMLDILGKFFEFKLCWDLIRRMN 96
Query: 189 ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
+ + AT + +R V +DA++ F + ++ + KD + S L+D L + V
Sbjct: 97 AHPSSPPNHATFRLMFKRYVSAHSVNDAIDTFNRLGEFNL-KDHTSFSNLLDALCEYKHV 155
Query: 249 EHAYKVFLEFKDCIPLS------SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
A + + + LS ++I N+++ GW K + +EM ++G D+
Sbjct: 156 LEAQDLLFGNDNRVTLSVDPIGNTKIHNMVLRGWFKLGWWSKCNEFWEEMDKKGVHKDLH 215
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
SY+ +++ C+ K KE+++KG K V+ Y IV+ A+G + ++ +++V+ +M
Sbjct: 216 SYSIYMDILCKGGKPWKAVKLFKEIKKKGFKLDVVVYNIVIRAIGLSHGVDFSIRVFREM 275
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED-MKKQGVVPNVLTYNTMISSACARSE 421
K P Y++LI +L R K+A + M G P ++Y+ +S +
Sbjct: 276 KELGIKPTVVTYNTLIRLLCDCYRHKEALALLRTIMPSDGCHPTAVSYHCFFASM---EK 332
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
+ L + +M E +P +TY LL R ++ + + M + S DA Y +
Sbjct: 333 PKQILAMFDEMVESGVRPTMDTYVMLLNKFGRWGFLRPVFMVWNKMKQLGCSPDAAAYNA 392
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVP 509
L+ L++ +++A + EEM++KG+ P
Sbjct: 393 LIDALVDKALIDMARKYDEEMLAKGLSP 420
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 99/369 (26%), Positives = 184/369 (49%), Gaps = 11/369 (2%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
N ++ LG++++F M L+ EM E++ ++ T ++ L + R D+A+E F M
Sbjct: 309 NALLTALGRAREFKRMNTLLAEMKEMDI-QPNVVTFGILINHLCKFRRVDEALEVFEKMN 367
Query: 225 K-----YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---CIPLSSQIFNILIHGW 276
+ VE D + L+D L K E + + C+P ++ +N LI G+
Sbjct: 368 GGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMP-NTVTYNCLIDGY 426
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK ++ A++ +M + G P+VV+ ++ C+ + EMQ KG K +
Sbjct: 427 CKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNA 486
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+TYT ++ A I +A++++++M C PD Y +LI LS+AG++ A+ +
Sbjct: 487 VTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSK 546
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
MK+ G P+++++N +I+ C +++ + A ++L++ME KPD TY L+ +
Sbjct: 547 MKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGD 606
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST-YK 515
+ L+ M K + TY +L+ +G L+ A F +M S VP ++ Y
Sbjct: 607 FSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYN 666
Query: 516 MLEEKLEKK 524
+L L +K
Sbjct: 667 ILINSLCRK 675
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 156/312 (50%), Gaps = 11/312 (3%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM-DELNNGYV--SLATM 200
G ++Q M YN ++D K+ M E +E+ D++N V ++ T+
Sbjct: 399 GLGLVERMRSQPRCMPNTVTYNCLIDGYCKAS----MIEAARELFDQMNKDGVPPNVVTL 454
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+T++ + + GR + AVE F M+ G++ + + L+ N++E A ++F E +
Sbjct: 455 NTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLE 514
Query: 261 --CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
C P + ++ LI G + K+D A + +M + GFSPD+VS+ I +CR+
Sbjct: 515 AGCSP-DAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLD 573
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + LKEM+ G KP +TY ++ K + A ++ +KM + +P Y +LI
Sbjct: 574 EAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALI 633
Query: 379 FILSKAGRVKDANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
G + +A +IF DM V PN + YN +I+S C +++ + AL L+ M+
Sbjct: 634 HAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGV 693
Query: 438 KPDCETYAPLLK 449
KP+ T+ + K
Sbjct: 694 KPNTNTFNAMFK 705
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 171/371 (46%), Gaps = 4/371 (1%)
Query: 155 TGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
G++ P++ YNT++D L K + LV+ M + T + ++ +
Sbjct: 372 NGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASM 431
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNI 271
+ A E F M K GV + L+ L+D + K + A + F E + + ++ +
Sbjct: 432 IEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTA 491
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI +C ++ A + EM + G SPD + Y I + + L +M+E G
Sbjct: 492 LIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAG 551
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P ++++ ++++ + +++EA ++ ++M++ PD Y++LI SK G A+
Sbjct: 552 FSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAH 611
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE-DLCKPDCETYAPLLKM 450
+ + M K+G+VP V+TY +I + C + A+K+ + M P+ Y L+
Sbjct: 612 RLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINS 671
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
CRK ++ + L+ M V + T+ ++ +GL E L A + M P
Sbjct: 672 LCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPD 731
Query: 511 HSTYKMLEEKL 521
+ T ++L E L
Sbjct: 732 YITMEILTEWL 742
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 158/362 (43%), Gaps = 52/362 (14%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVE--KDTRALSVLMDTLVK----GNSVEHAYKVFLEFK- 259
L R GR DDA+ M + E ++ ++ L K G +V+ V L K
Sbjct: 202 LFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKF 261
Query: 260 ---DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ P +S LI C++ + D A + + + G + S + R ++
Sbjct: 262 AEHEVFP-NSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRARE 320
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD---------- 366
F++++ L EM+E +P+V+T+ I+++ L K ++++EAL+V+EKM +
Sbjct: 321 FKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDV 380
Query: 367 -------------------------------CLPDTSFYSSLIFILSKAGRVKDANEIFE 395
C+P+T Y+ LI KA ++ A E+F+
Sbjct: 381 ITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFD 440
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M K GV PNV+T NT++ C A++ +M+ K + TY L++ C
Sbjct: 441 QMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVN 500
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
++ L M + S DA Y +L+ GL ++GKL+ A +M G P ++
Sbjct: 501 NIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFN 560
Query: 516 ML 517
+L
Sbjct: 561 VL 562
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 146/354 (41%), Gaps = 50/354 (14%)
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNIL 272
++ ++ F+ K + + A ++L+ + V+ ++ V+ E L+ I NIL
Sbjct: 140 HNKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRLT-HIRNIL 198
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQG-------------FS--------------------- 298
I + +VDDA + EM Q FS
Sbjct: 199 IDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLV 258
Query: 299 ---------PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
P+ + T I CR + D L + + G + ++ ALG+A
Sbjct: 259 SKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRA 318
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM---KKQG--VVP 404
++ + +MK D P+ + LI L K RV +A E+FE M + G V P
Sbjct: 319 REFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEP 378
Query: 405 NVLTYNTMISSACARSEEENALKLLQKME-EDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
+V+TYNT+I C +E L L+++M + C P+ TY L+ C+ ++ L
Sbjct: 379 DVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAREL 438
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M K+ V + T +LV G+ + G++ A FF EM KG+ TY L
Sbjct: 439 FDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTAL 492
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 91/221 (41%), Gaps = 37/221 (16%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
T++ L + G+ D A MK+ G D + +VL++ + N ++ AY++ E ++
Sbjct: 526 TLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENA 585
Query: 262 -IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE------ 314
I +N LI + KT A + MK+M ++G P VV+Y I YC
Sbjct: 586 GIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEA 645
Query: 315 -KDFRKVDDTLK-----------------------------EMQEKGCKPSVITYTIVMH 344
K FR + T K +M+ KG KP+ T+ +
Sbjct: 646 MKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFK 705
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
L + +++A ++ ++M C PD L LS G
Sbjct: 706 GLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVG 746
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 91/203 (44%), Gaps = 8/203 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N +++ + K +E++KEM+ N G T +T++ + G + A +
Sbjct: 559 FNVLINGFCRKNKLDEAYEMLKEME--NAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKK 616
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTR 280
M K G+ L+ +++ A K+F + +P ++ I+NILI+ C+
Sbjct: 617 MVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKN 676
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+VD A M +M +G P+ ++ + + K + + M E C P IT
Sbjct: 677 QVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNPDYITME 736
Query: 341 IV---MHALGKAKQINEALKVYE 360
I+ + A+G+ ++ ++ YE
Sbjct: 737 ILTEWLSAVGETAKLKSFVQGYE 759
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 118/275 (42%), Gaps = 19/275 (6%)
Query: 279 TRKVDDAQKAMKEM-FQQGFSP----DVVSYT--CFIEHYCREKD-FRKVDDTLKEMQEK 330
TR + KA+K + Q SP ++S+T EH RE + K+ D K +
Sbjct: 94 TRLLGSTAKALKFFNWVQANSPCQDSPLLSFTLEAVFEHASREPNSHNKLLDLFKTSKSH 153
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
SV T+++ G+A+ ++E+ VY ++ L T + LI +L + GRV DA
Sbjct: 154 KIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRL--THIRNILIDVLFRKGRVDDA 211
Query: 391 NEIFEDM--KKQGVVPNVLTYNTMISSACARS------EEENALKLLQKMEEDLCKPDCE 442
+ ++M K PN T + + S+ R +EE + L+ K E P+
Sbjct: 212 LHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSI 271
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
L+ CR R +L + K M+A + +L+ L + + + + EM
Sbjct: 272 WLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEM 331
Query: 503 ISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
I P T+ +L L K +R+ A E K+
Sbjct: 332 KEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKM 366
>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
Length = 733
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 194/409 (47%), Gaps = 6/409 (1%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
+ D A FF WA Q Y H P +Y M+++L K+ K C + V +
Sbjct: 109 QLQTDERVALRFFYWADRQWRYRHDPIVYYAMLEILSKT-KLCQGAKRVLRLMAKRRIER 167
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+M R G+ +A+ M+K G+E D + + LV GN ++ A + F
Sbjct: 168 RPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR-F 226
Query: 256 LEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
LE + + + +N LI G+C +++DA + + EM +G SPD +SY + C+
Sbjct: 227 LERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCK 286
Query: 314 EKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
EK +++ +++M ++ P +TY +H L K +EAL+ + + D
Sbjct: 287 EKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 346
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
YS+++ + GR+ A EI +M +G +P+V+TY ++I+ C + + A K+L++M
Sbjct: 347 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 406
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ CKP+ +Y LL C+ ++ + +A TY+ L+ G GK
Sbjct: 407 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKS 466
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHA 540
AC EMI KG P +L + L +++++ AK + + L +
Sbjct: 467 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 515
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 182/362 (50%), Gaps = 17/362 (4%)
Query: 182 ELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
E+V EM + G + + T ++++ L + + D A + R M K+G + +T + + L++
Sbjct: 366 EIVNEM--FSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTALLN 423
Query: 241 TLVK-GNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L K GNS+E + + + ++ +++L+HG+ + K +A ++EM ++GF P
Sbjct: 424 GLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKGFFP 483
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQE---KGCKPSVITYTIVMHALGKAKQINEAL 356
V I+ C+E+ KVD+ + M++ GC +V+ +T V+H + + AL
Sbjct: 484 TPVEINLLIQSLCQEE---KVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 540
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ + M + PD Y+++I L K GR+++A ++ M + G +P +TY T+I
Sbjct: 541 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQY 600
Query: 417 CARSEEENALKLLQKMEEDLCKPDCET-YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C E+ LKLL+KM L + +C T Y +++ C ++ LL + + +D
Sbjct: 601 CRMGRVEDLLKLLEKM---LSRQECRTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKID 657
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
A T L+ + G ++ + M ++ ++P K+ E+ +K L E +K
Sbjct: 658 ANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIP---DLKLCEKVSKKLMLEGKSEEADK 714
Query: 536 LL 537
L+
Sbjct: 715 LI 716
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 129/247 (52%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
++ ++H +C+ ++D A++ + EMF +G PDVV+YT I C+E+ + L++M
Sbjct: 348 YSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMY 407
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+ GCKP+ ++YT +++ L K EA ++ + +P+ YS L+ + G+
Sbjct: 408 KHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSS 467
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A ++ +M K+G P + N +I S C + + A + +++ + C + + ++
Sbjct: 468 EACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVI 527
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+K ++ LL M+ ++ D TY +++ L + G++E A +M+ G +
Sbjct: 528 HGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWI 587
Query: 509 PYHSTYK 515
P TY+
Sbjct: 588 PTPVTYR 594
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 113/408 (27%), Positives = 185/408 (45%), Gaps = 43/408 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRG 222
+NT+V L + E+V M E +G V+ + T S+I+ L GR DDAVE
Sbjct: 394 FNTIVTSLCQQGLVDRAIEVVDHMSE--HGCVADIVTYSSILDGLCDVGRVDDAVELLSR 451
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
+K YG + DT A + ++ L E A ++ E DC P FN ++ C+
Sbjct: 452 LKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPP-DEVTFNTVVASLCQKG 510
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
VD A + +++M + G SPD+V+Y C I+ C E + L ++Q GCKP ++T+
Sbjct: 511 LVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFN 570
Query: 341 IVMHALGKAKQ-----------------------------------INEALKVYEKMKSD 365
++ L + + +A++ + M +
Sbjct: 571 TLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAEN 630
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
C+P++S YS ++ L KAG+ + A E+ M P+++TYNT+IS+ + E A
Sbjct: 631 GCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEA 688
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L LL+ M + PD TY L CR+ +L + +S D Y ++ G
Sbjct: 689 LDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLG 748
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ +LA F M+S G +P STY +L E L L + +R+
Sbjct: 749 FCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRL 796
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 89/329 (27%), Positives = 159/329 (48%), Gaps = 6/329 (1%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
++ T +T++ R GR +DA GM DT + L+ L + A V
Sbjct: 217 ATVVTYNTMVNGYCRAGRIEDARRLINGMP---FPPDTFTFNPLIRALCVRGRIPDALAV 273
Query: 255 FLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
F + + C P S ++IL+ CK A + EM +G PD+V+Y I C
Sbjct: 274 FDDMLHRGCSP-SVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMC 332
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
E D + + L + GCKP +TYT V+ +L +++ E ++ +M S++C PD
Sbjct: 333 NEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEV 392
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
+++++ L + G V A E+ + M + G V +++TY++++ C ++A++LL ++
Sbjct: 393 TFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRL 452
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ CKPD Y +LK C ++ + L+ M +D D T+ ++V L + G +
Sbjct: 453 KSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLV 512
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ A E+M G P TY + + L
Sbjct: 513 DRAIRVVEQMSENGCSPDIVTYNCIIDGL 541
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 156/331 (47%), Gaps = 5/331 (1%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
+++RL GR DA F + G + +++ + +E A ++
Sbjct: 193 LIKRLCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDARRLINGMP--F 247
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P + FN LI C ++ DA +M +G SP VV+Y+ ++ C+E +R+
Sbjct: 248 PPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQAMA 307
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L EM+ KGC+P ++TY ++++A+ ++EAL + + S C PD Y+ ++ L
Sbjct: 308 LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLC 367
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
+ R K+ E+ +M P+ +T+NT+++S C + + A++++ M E C D
Sbjct: 368 GSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIV 427
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY+ +L C R+ LL+ + D Y ++++GL + + E A EM
Sbjct: 428 TYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEM 487
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ P T+ + L +K L + R+
Sbjct: 488 LCSDCPPDEVTFNTVVASLCQKGLVDRAIRV 518
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 93/365 (25%), Positives = 169/365 (46%), Gaps = 10/365 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++D K + L+ EM + T + ++ + G D+A+ +
Sbjct: 289 YSILLDATCKESGYRQAMALLDEM-RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNL 347
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+G + D + ++ +L + ++ E +C P FN ++ C+
Sbjct: 348 PSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAP-DEVTFNTIVTSLCQQGL 406
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT---LKEMQEKGCKPSVIT 338
VD A + + M + G D+V+Y+ ++ C D +VDD L ++ GCKP I
Sbjct: 407 VDRAIEVVDHMSEHGCVADIVTYSSILDGLC---DVGRVDDAVELLSRLKSYGCKPDTIA 463
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT V+ L +Q A ++ +M DC PD +++++ L + G V A + E M
Sbjct: 464 YTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMS 523
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ G P+++TYN +I C S ++A++LL ++ CKPD T+ LLK C R +
Sbjct: 524 ENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWE 583
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
L+ +M +++ D T+ +++ L + G L A + M G VP STY ++
Sbjct: 584 DAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVV 643
Query: 519 EKLEK 523
+ L K
Sbjct: 644 DALLK 648
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 156/323 (48%), Gaps = 7/323 (2%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ L + G D A+ M + G D + ++D L + ++ A ++ +
Sbjct: 498 TFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDL 557
Query: 259 KDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ C + FN L+ G C + +DA++ M M + PD +++ I C++
Sbjct: 558 QSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLL 617
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ +TLK M E GC P+ TY+IV+ AL KA + AL++ M + PD Y+++
Sbjct: 618 TQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTV 675
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L+KAG++++A ++ M G+ P+ TY ++ C + A+++L+++++
Sbjct: 676 ISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGL 735
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD Y +L CR +R + HM + D TY L+ L G L+ A
Sbjct: 736 SPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKR 795
Query: 498 FFEEMISKGIVPYHSTYKMLEEK 520
+ S G++ K++EE+
Sbjct: 796 LLASLCSLGVL----DKKLIEEE 814
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/373 (24%), Positives = 164/373 (43%), Gaps = 39/373 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y ++ L S+++ + EL+ EM NN T +TI+ L + G D A+E M
Sbjct: 359 YTPVLKSLCGSERWKEVEELLAEMTS-NNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHM 417
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
++G D S ++D G C +VD
Sbjct: 418 SEHGCVADIVTYSSILD----------------------------------GLCDVGRVD 443
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
DA + + + G PD ++YT ++ C + + + ++ + EM C P +T+ V+
Sbjct: 444 DAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVV 503
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+L + ++ A++V E+M + C PD Y+ +I L + DA E+ D++ G
Sbjct: 504 ASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCK 563
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P+++T+NT++ C E+A +L+ M C PD T+ ++ C+K +
Sbjct: 564 PDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIET 623
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
L M +N ++ TY+ +V L+++GK + A M + P TY + L K
Sbjct: 624 LKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTK 681
Query: 524 KRLGNAKERINKL 536
G +E ++ L
Sbjct: 682 A--GKMEEALDLL 692
>gi|297791089|ref|XP_002863429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297309264|gb|EFH39688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 472
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 124/449 (27%), Positives = 204/449 (45%), Gaps = 53/449 (11%)
Query: 134 LRRFSNDLTPAFGFFTWAKTQ--TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN 191
L R D+ + F A + GY+H + MV L + KF ++V M ++
Sbjct: 22 LMRAEKDVEKSIAVFDSATAEYANGYLHDQSSFGYMVSRLVSANKFKAAEDIVARM-KIE 80
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
N VS + +I R R R D++ F MK + + +A ++ LV+ N + A
Sbjct: 81 NCVVSEDILLSICRGYGRVHRPFDSLRVFHKMKDFDCDPSQKAYVTVLAILVEENQLNLA 140
Query: 252 YKVFLEFKDC-IPLSSQIFNILIHGWCKT-RKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+K + ++ +P + N+LI C+ VD K EM ++G PD +Y I
Sbjct: 141 FKFYKNMREIGLPPTVASLNVLIKALCRNDGTVDAGLKIFHEMPKRGCDPDSYTYGTLIS 200
Query: 310 HYCREKDFRKVDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
CR F ++D+ K EM EK C P+V+TYT +++ L +K ++EA++ E+MK
Sbjct: 201 GLCR---FGRIDEAKKLFTEMVEKDCAPTVVTYTSLINGLCGSKNVDEAMRYVEEMKGKG 257
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
P+ YSSL+ L K GR A E+FE M +G PN++TY T+I+ C + + A+
Sbjct: 258 IEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMARGCRPNMVTYTTLITGLCKEQKIQEAV 317
Query: 427 KLLQKMEEDLCKPDCETYAPLLK-MCCRKKRMKVLNFL------------LT-------- 465
+LL +M KPD Y ++ C K + NFL LT
Sbjct: 318 ELLDRMNLQGLKPDAGLYGKVISGFCAVSKFREAANFLDEMILGGITPNRLTWNIHVKTS 377
Query: 466 --------------------HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
M +S++ T SLV+ L + G+ + A +E+++
Sbjct: 378 NEVVRGLCTNYPSRAFTLYLSMRSRGISVEVETLDSLVKCLCKKGEFQKAVQLVDEIVTD 437
Query: 506 GIVPYHSTYKML-EEKLEKKRLGNAKERI 533
G +P T+K+L L+ +G A + +
Sbjct: 438 GCIPNKGTWKLLIGHTLDNTIVGEASDSL 466
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 102/213 (47%), Gaps = 2/213 (0%)
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
+M++ C PS Y V+ L + Q+N A K Y+ M+ P + + LI L +
Sbjct: 111 KMKDFDCDPSQKAYVTVLAILVEENQLNLAFKFYKNMREIGLPPTVASLNVLIKALCRND 170
Query: 386 RVKDAN-EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
DA +IF +M K+G P+ TY T+IS C + A KL +M E C P TY
Sbjct: 171 GTVDAGLKIFHEMPKRGCDPDSYTYGTLISGLCRFGRIDEAKKLFTEMVEKDCAPTVVTY 230
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ C K + + M + + TY+SL+ GL + G+ A FE M++
Sbjct: 231 TSLINGLCGSKNVDEAMRYVEEMKGKGIEPNVFTYSSLMDGLCKDGRSLQAMELFEMMMA 290
Query: 505 KGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
+G P TY L L +++++ A E ++++
Sbjct: 291 RGCRPNMVTYTTLITGLCKEQKIQEAVELLDRM 323
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 158 bits (399), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/321 (28%), Positives = 151/321 (47%), Gaps = 13/321 (4%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL 118
SP+E FV L ++ H N ++ L + + +S S+ + +
Sbjct: 55 SPEETFVAEKLHSLIKDHYRNNPNK----TLPPDPTYTIPSLSLDFSQ-------TISTV 103
Query: 119 KGCGVSVSNSLVEQTLR-RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKF 177
S+ ++EQ+ R + FF WA Q G+ +PE +N MVD GK + F
Sbjct: 104 HSISPSIIRHVIEQSGGVRHGIPVPQVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMF 163
Query: 178 CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
L W ++ M + + +++ T S +MRR VR G +A+ AF M+ Y + D A S+
Sbjct: 164 DLAWHVIDLM-KARDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSI 222
Query: 238 LMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
L+ L + A + F KD ++ L+ GWC+ + +A++ EM G
Sbjct: 223 LISILCRKRRASEAQEFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGI 282
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
P+V +Y+ I+ CR + D EM + GC+P+ ITY +M KA + + L+
Sbjct: 283 KPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQ 342
Query: 358 VYEKMKSDDCLPDTSFYSSLI 378
VY +MK C PDT Y+ LI
Sbjct: 343 VYNQMKRLGCEPDTVTYNFLI 363
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 122/250 (48%), Gaps = 6/250 (2%)
Query: 208 VRGGRYDDAVEAFRGMKKY--GVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDCIP 263
VR G V AF Y G +K A + ++D K + A+ V ++ +D +
Sbjct: 121 VRHGIPVPQVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARD-VE 179
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
++ + F+IL+ + + +A A M PD ++++ I CR++ + +
Sbjct: 180 ITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEF 239
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+++K +P VI YT ++ +A I+EA +V+ +MK P+ YS +I L +
Sbjct: 240 FDSLKDK-FEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCR 298
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
G++ A+++F +M G PN +TYN+++ E L++ +M+ C+PD T
Sbjct: 299 CGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVT 358
Query: 444 YAPLLKMCCR 453
Y L++ C+
Sbjct: 359 YNFLIETHCK 368
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 116/256 (45%), Gaps = 9/256 (3%)
Query: 236 SVLMDTLVKGNSVEHAYKV--------FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
S++ + + V H V + ++D S + FN ++ K R D A
Sbjct: 109 SIIRHVIEQSGGVRHGIPVPQVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWH 168
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+ M + V +++ + Y R + M++ CKP I ++I++ L
Sbjct: 169 VIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILC 228
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
+ ++ +EA + ++ +K D PD Y++L+ +AG + +A +F +MK G+ PNV
Sbjct: 229 RKRRASEAQEFFDSLK-DKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVY 287
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
TY+ +I S C + A + +M + C+P+ TY L+++ + R + + + M
Sbjct: 288 TYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQM 347
Query: 468 FKNDVSMDAGTYASLV 483
+ D TY L+
Sbjct: 348 KRLGCEPDTVTYNFLI 363
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 105/227 (46%), Gaps = 1/227 (0%)
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQI 352
+Q GF ++ ++ + + F + M+ + + +V T++I+M +A
Sbjct: 139 YQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETFSILMRRYVRAGLA 198
Query: 353 NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
EA+ + +M+ +C PD +S LI IL + R +A E F+ +K + P+V+ Y +
Sbjct: 199 AEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSLKDK-FEPDVIVYTNL 257
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
+ C A ++ +M+ KP+ TY+ ++ CR ++ + + M
Sbjct: 258 VRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGC 317
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
++ TY SL+R +++G+ E + +M G P TY L E
Sbjct: 318 QPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIE 364
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++R R G +A F MK G++ + S+++D+L + + A+ VF E D
Sbjct: 255 TNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMLD 314
Query: 261 --CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
C P +S +N L+ K + + + +M + G PD V+Y IE +C+++
Sbjct: 315 AGCQP-NSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDE 370
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 384 AGRVKD---ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
AG+V+ A + + MK + V V T++ ++ A+ +ME+ CKPD
Sbjct: 157 AGKVRMFDLAWHVIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPD 216
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
++ L+ + CRK+R + K+ D Y +LVRG +G + A F
Sbjct: 217 KIAFSILISILCRKRRASEAQEFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFG 275
Query: 501 EMISKGIVPYHSTYKMLEEKL 521
EM GI P TY ++ + L
Sbjct: 276 EMKVAGIKPNVYTYSIVIDSL 296
>gi|125544731|gb|EAY90870.1| hypothetical protein OsI_12477 [Oryza sativa Indica Group]
Length = 601
Score = 158 bits (399), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 144/277 (51%), Gaps = 2/277 (0%)
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K V A ++ E + +PLS + + L++GWC+ K+D+A+ + M +PDVV
Sbjct: 172 AKTGHVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVV 231
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+ + + + F + +EM+ +GC P+ ++YT +M LG +++EA++V+ +M
Sbjct: 232 VFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEM 291
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+ C PD+ Y +L+ KAGR+ E + M ++G+ + Y + + +
Sbjct: 292 RRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQL 351
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
E L+L+++M E C PD Y ++++ C+ K L M N++S T+A +
Sbjct: 352 EECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIM 411
Query: 483 VRGLIESGKLELACSFFEEMISKG--IVPYHSTYKML 517
V GL+ G L AC +F++M+ +G + P + K L
Sbjct: 412 VTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDL 448
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/292 (20%), Positives = 121/292 (41%), Gaps = 40/292 (13%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ +T++ V GR++DA E R M++ G + + + LM L V+ A +VF+
Sbjct: 230 VVVFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFV 289
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E K C P S + L+ +CK ++ + + M ++G D Y F + ++
Sbjct: 290 EMRRKGCAP-DSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKK 348
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + + ++ M+E C P + Y +V+ K + +A+ ++ +M++++ P +
Sbjct: 349 EQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTF 408
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQG--VVP---------------------------- 404
+ ++ L G + +A F+DM +G V P
Sbjct: 409 AIMVTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCI 468
Query: 405 -------NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
NV + I + A+ + A M + P +T+A L+K
Sbjct: 469 MTKGCELNVGAWTIWIHALYAKKHVKEACMYCLDMLDAGLMPQPDTFAKLMK 520
>gi|115455091|ref|NP_001051146.1| Os03g0728200 [Oryza sativa Japonica Group]
gi|50428716|gb|AAT77067.1| putative PPR repeat containing protein [Oryza sativa Japonica
Group]
gi|108710874|gb|ABF98669.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
gi|113549617|dbj|BAF13060.1| Os03g0728200 [Oryza sativa Japonica Group]
Length = 601
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 144/277 (51%), Gaps = 2/277 (0%)
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K V A ++ E + +PLS + + L++GWC+ K+D+A+ + M +PDVV
Sbjct: 172 AKTGHVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVV 231
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+ + + + F + +EM+ +GC P+ ++YT +M LG +++EA++V+ +M
Sbjct: 232 VFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEM 291
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+ C PD+ Y +L+ KAGR+ E + M ++G+ + Y + + +
Sbjct: 292 RRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQL 351
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
E L+L+++M E C PD Y ++++ C+ K L M N++S T+A +
Sbjct: 352 EECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIM 411
Query: 483 VRGLIESGKLELACSFFEEMISKG--IVPYHSTYKML 517
V GL+ G L AC +F++M+ +G + P + K L
Sbjct: 412 VTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDL 448
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 97/367 (26%), Positives = 183/367 (49%), Gaps = 4/367 (1%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
+ Y ++ L + K + L +M L G V + T + ++ L GGR+ A++ F
Sbjct: 339 QTYTALISGLSRLGKLEVAIGLYHKM--LKEGLVPNTVTYNALINELCVGGRFSTALKIF 396
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKT 279
M+ +G +T+ + ++ L G +E A +F + PL + + +N LI+G+
Sbjct: 397 HWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTK 456
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
V++A + + M + G PD +Y + + + +EM E G P+ ++Y
Sbjct: 457 GNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSY 516
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ K +++ AL + ++M+ C P+ Y+++I LSK R +A +I + M +
Sbjct: 517 TALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE 576
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
QG++PNV+TY T+I C + A K+ ME+ C P+ TY+ L+ C++ +
Sbjct: 577 QGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADE 636
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
LL M + ++ D T+ SL+ G + G+++ A M+ G P + TY +L +
Sbjct: 637 AEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLK 696
Query: 520 KLEKKRL 526
L+K+ L
Sbjct: 697 GLQKECL 703
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 114/394 (28%), Positives = 193/394 (48%), Gaps = 22/394 (5%)
Query: 131 EQTLRR---FSNDLTP-AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
E+ +RR F N+++ FGF ++ NT++ L K + L K+
Sbjct: 141 EEEIRRVADFLNEISGMGFGFSLYS------------CNTLLIQLAKFEMVEGARNLYKQ 188
Query: 187 MDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
M LN+G SL T +T++ L + G+ +A + +Y + D + L+ +
Sbjct: 189 M--LNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRN 246
Query: 246 NSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
+++ A+ VF + + C P +S ++ LI+G C +VD+A ++EM ++G P V +
Sbjct: 247 RNLDLAFGVFDRMVKEGCDP-NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYT 305
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
YT I C + + + + M+++GC+P+V TYT ++ L + ++ A+ +Y KM
Sbjct: 306 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 365
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
+ +P+T Y++LI L GR A +IF M+ G + N TYN +I C + E
Sbjct: 366 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE 425
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A+ L +KM + P TY L+ K + LL M +N D TY LV
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 485
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
G + GKLE A +F+EM+ G+ P +Y L
Sbjct: 486 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTAL 519
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 179/406 (44%), Gaps = 24/406 (5%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFC-------LMW----------- 181
D FF W + Y H + +M++ L + + F LM
Sbjct: 87 DTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRR 146
Query: 182 --ELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+ + E+ + G+ SL + +T++ +L + + A ++ M G++ + L+
Sbjct: 147 VADFLNEISGMGFGF-SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLI 205
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI--LIHGWCKTRKVDDAQKAMKEMFQQGF 297
+ L K V A + + LS +F LI G C+ R +D A M ++G
Sbjct: 206 NILSKKGKVREAELILSQIFQ-YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGC 264
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
P+ V+Y+ I C E + D L+EM EKG +P+V TYT+ + AL + EA++
Sbjct: 265 DPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIE 324
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ +MK C P+ Y++LI LS+ G+++ A ++ M K+G+VPN +TYN +I+ C
Sbjct: 325 LVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELC 384
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
ALK+ ME + +TY ++K C ++ L M K
Sbjct: 385 VGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVV 444
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
TY +L+ G + G + A + M G P TY L K
Sbjct: 445 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSK 490
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 107/216 (49%), Gaps = 15/216 (6%)
Query: 146 GFFTWAKTQTGYMHTPEM-----------YNTMVDVLGKSKKFCLMWELVKEMDELNNGY 194
GF W K ++ + EM Y ++D K K + L+K M+E+
Sbjct: 487 GFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCN- 545
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
++ + + ++ L + R+ +A + M + G+ + + L+D L + + A+K+
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605
Query: 255 F--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
F +E + C+P + ++ LI+G C+ K D+A+ +KEM ++G +PD V++T I+ +
Sbjct: 606 FHDMEKRKCLP-NLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFV 664
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
L+ M + GCKP+ TY++++ L K
Sbjct: 665 VLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700
>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Vitis vinifera]
Length = 755
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 110/426 (25%), Positives = 190/426 (44%), Gaps = 28/426 (6%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
D D + +I+ +Q ++V + S + L D A FF WAK +
Sbjct: 70 DKDSVREIVREQRWDDFRIVSLFDSALAPIWAS---RVLVELCQDARLALRFFEWAKGRI 126
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ HT E Y +V +L ++ + ++KE+ +RR++ D
Sbjct: 127 GFQHTSEAYCILVHILFCARFYSDANAVLKEL--------------ICLRRVLPSWDVFD 172
Query: 216 AVEAFRGM--KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNI 271
+ A R + +GV L L++ +E A + FL+ + P + N
Sbjct: 173 LLWATRNVCVPGFGV------FDALFSALIELGMLEEASECFLKMRKFRVFP-KPRSCNA 225
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+H K + D ++K K+M G V +Y I++ C+E D +M+E G
Sbjct: 226 LLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAG 285
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P ++TY ++ GK ++E + ++E+MK DC PD Y++LI K R+ A
Sbjct: 286 FTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAF 345
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
E +MK G+ PNV+TY+T I + C + A+K M P+ TY L+
Sbjct: 346 EFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDAN 405
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C+ + L+ + + + ++ TY +L+ GL E G+++ A F M++ G+ P
Sbjct: 406 CKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQ 465
Query: 512 STYKML 517
TY L
Sbjct: 466 ETYTAL 471
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 174/393 (44%), Gaps = 37/393 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ K ++ +E + EM + N ++ T ST + + G +A++ F M
Sbjct: 328 YNALINCFCKFERMPKAFEFLHEM-KANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 386
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
++ + + + L+D K ++ A K+ E + I L+ + L+ G C+ ++
Sbjct: 387 RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRM 446
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV------ 336
+A++ + M G +P+ +YT + + + K+ D LKEM+EK KP +
Sbjct: 447 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI 506
Query: 337 -----------------------------ITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
+ YT +M A K+ Q EAL + E+M
Sbjct: 507 LWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGL 566
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
+ Y +LI L K+G V++A F M + G+ PNV Y ++ C + E A K
Sbjct: 567 IATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKK 626
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L +M + PD Y L+ + ++ L M + + +D Y +L+ GL
Sbjct: 627 LFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLS 686
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
SG+++ A + +EMI KG++P Y L +K
Sbjct: 687 HSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKK 719
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 161/347 (46%), Gaps = 4/347 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +++D K+ +LV+E+ L G +++ T + ++ L GR +A E FR
Sbjct: 398 YTSLIDANCKAGNLAEALKLVEEI--LQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRA 455
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
M GV + + L+ +K +E+A + E K+ CI ++ ++ G C +
Sbjct: 456 MLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESR 515
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+++A+ + E+ + G + + V YT ++ Y + + L+EM + G + +TY
Sbjct: 516 LEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCA 575
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K+ + EA+ + +M P+ + Y++L+ L K + A ++F++M +G
Sbjct: 576 LIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKG 635
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
++P+ + Y +I + AL L +M E + D Y L+ +++
Sbjct: 636 MMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKAR 695
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
LL M V D Y L++ GK++ A EM +G++
Sbjct: 696 NLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGMI 742
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/389 (27%), Positives = 182/389 (46%), Gaps = 15/389 (3%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
E M++ S ++ +L++EM E + T + ++ V+ G++ +A E +
Sbjct: 256 ERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYD 315
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKT 279
M G+ T S ++D K N ++ A +F + K C P FN LI G+C+
Sbjct: 316 EMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-DIITFNTLIAGYCRA 374
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++VDD K + EM + G + ++YT I +C+ D D L+EM G P+V+T
Sbjct: 375 KRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTC 434
Query: 340 TIVMHAL---GKAKQINEALKVYEKMKSD--------DCLPDTSFYSSLIFILSKAGRVK 388
++ L GK K E K +K K D PD Y+ LI L G+
Sbjct: 435 NTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFL 494
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A E++E+M +G+VP+ +TYN++I C +S + A ++ M P+ T+ L+
Sbjct: 495 EAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 554
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+ R+ L M + + +A TY +L+ G + G + A F+EM++ G+
Sbjct: 555 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVY 614
Query: 509 PYHSTYK-MLEEKLEKKRLGNAKERINKL 536
P T + ML K+ L A + L
Sbjct: 615 PDTITIRNMLTGLWSKEELKRAVAMLEDL 643
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 191/414 (46%), Gaps = 28/414 (6%)
Query: 145 FGFFTWAK-TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
F T+ K T+ G+ T ++T++ L + +L +M + N + T +T+
Sbjct: 131 FALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCKPN-----VVTFTTL 185
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
M L R GR +AV M + G++ + ++D + K A + + ++
Sbjct: 186 MNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH 245
Query: 264 LSSQIF-------NILIHGWCKTRKVDDAQKAMKEMFQQG-FSPDVVSYTCFIEHYCREK 315
+ + +I+G+C + + +AQ+ ++EM ++ SPDVV+Y I + +E
Sbjct: 246 IKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEG 305
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
F + ++ EM +G PS ITY+ ++ K +++ A ++ M + C PD ++
Sbjct: 306 KFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFN 365
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI +A RV D ++ +M + G+V N +TY T+I C + A LLQ+M
Sbjct: 366 TLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSS 425
Query: 436 LCKPDCETYAPLLKMCCRKKRMK------------VLNFLLTHMFKNDVSMDAGTYASLV 483
P+ T LL C ++K ++ +H F N V D TY L+
Sbjct: 426 GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPF-NGVEPDVQTYNILI 484
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
GLI GK A +EEM +GIVP TY + L K+ RL A + + +
Sbjct: 485 SGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSM 538
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 147/304 (48%), Gaps = 14/304 (4%)
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
+KG +E A +F + PL S I F L+ + ++D ++M + +
Sbjct: 56 IKG--LEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMRRVPCNA 113
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
S+T ++ +C T ++ + G P+V+T++ ++H L +I+EAL ++ +
Sbjct: 114 YSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQ 173
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M C P+ +++L+ L + GRV +A + + M + G+ PN +TY T++ C +
Sbjct: 174 M----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGD 229
Query: 422 EENALKLLQKMEE-DLCKPDCETYAPLLKMC-----CRKKRMKVLNFLLTHMF-KNDVSM 474
+AL LL+KMEE KP+ + + C C R LL M + +S
Sbjct: 230 TVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISP 289
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
D TY +L+ ++ GK A ++EM+ +GI+P TY + + K+ +A E +
Sbjct: 290 DVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMF 349
Query: 535 KLLA 538
L+A
Sbjct: 350 YLMA 353
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 132/282 (46%), Gaps = 26/282 (9%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGG 211
T+ G + Y T++ + +L++EM +++G ++ T +T++ L G
Sbjct: 388 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEM--VSSGVCPNVVTCNTLLDGLCDNG 445
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI 271
+ DA+E F+ M+K ++ D H + + + Q +NI
Sbjct: 446 KLKDALEMFKAMQKSKMDIDA----------------SHPF-------NGVEPDVQTYNI 482
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G K +A++ +EM +G PD ++Y I C++ + M K
Sbjct: 483 LISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKS 542
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P+V+T+T +++ KA ++++ L+++ +M + + Y +LI K G + A
Sbjct: 543 FSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGAL 602
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+IF++M GV P+ +T M++ ++ E + A+ +L+ ++
Sbjct: 603 DIFQEMMASGVYPDTITIRNMLTGLWSKEELKRAVAMLEDLQ 644
>gi|449443903|ref|XP_004139715.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
gi|449475521|ref|XP_004154479.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Cucumis sativus]
Length = 660
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 105/376 (27%), Positives = 189/376 (50%), Gaps = 23/376 (6%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
N ++ LGK+++F M L+++M ++N ++ T ++ L + R DDA+E F MK
Sbjct: 156 NALLTGLGKAREFGKMNLLMRKMKDMN-IQPTVITFGILINHLCKFRRIDDALEVFEKMK 214
Query: 225 ------KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGW 276
K V DT + L+D L K E A + + + C P ++ FN LI+G+
Sbjct: 215 GEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCAP-TTATFNCLINGY 273
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
C++ +++ A K EM P+V++ ++ C+ + + MQ+KG K +
Sbjct: 274 CRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNN 333
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+TYT+ ++A +N+A++ ++M D C PD Y +LI L++AGR+ DA+ +
Sbjct: 334 VTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSK 393
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
+K+ G + + YN +IS C +++ + A + L +ME KPD TY L+
Sbjct: 394 LKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFS---- 449
Query: 457 MKVLNFLLTHMFKNDVSMDAG------TYASLVRGLIESGKLELACSFFEEM--ISKGIV 508
K+ NF L H F ++ + G TY +L+ + ++ A F+EM ++ +
Sbjct: 450 -KIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVP 508
Query: 509 PYHSTYKMLEEKLEKK 524
P Y +L + L K+
Sbjct: 509 PNTVIYNILIDSLCKQ 524
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 169/380 (44%), Gaps = 75/380 (19%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPE--MYNTMVDVLGKSKK----FCLMWELVKE--- 186
R +D F K +T P+ MYNT++D L K + CLM ++ +
Sbjct: 201 RRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGLCKVGRQEEALCLMGKMRSDQCA 260
Query: 187 -----MDELNNGYV----------------------SLATMSTIMRRLVRGGRYDDAVEA 219
+ L NGY ++ T++T++ + + R AVE
Sbjct: 261 PTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNVITLNTLVDGMCKHNRISTAVEF 320
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KD-CIP-------------- 263
FR M++ G++ + +V ++ N++ A + E KD C P
Sbjct: 321 FRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDEMSKDGCFPDAVVYYTLICGLAQ 380
Query: 264 --------------------LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
L +N+LI +CK K+D AQ+ + EM G PD V+
Sbjct: 381 AGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVT 440
Query: 304 YTCFIEHYCREKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
Y I ++ + +F+ +K+M +E+G P+V TY ++HA I+EA+K++++M
Sbjct: 441 YNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEM 500
Query: 363 K--SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+ P+T Y+ LI L K +V A + +DMK +GV+PN TYN++ + ++
Sbjct: 501 NNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKN 560
Query: 421 EEENALKLLQKMEEDLCKPD 440
+ A KL+ +M E C PD
Sbjct: 561 WLDKAFKLMDRMVEQACNPD 580
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 189/437 (43%), Gaps = 92/437 (21%)
Query: 195 VSLATMST---IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
+SL+T + ++RRL R G D+A+ AF + + K+T + +++ L+K V++A
Sbjct: 1 MSLSTAQSSVHLLRRLGRIGMVDEALAAFSTLDSHA--KNTNVRNEIINLLLKSGRVDNA 58
Query: 252 YKVF-------LEFKDCIPLSSQIFNIL--IHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
V EF+ + +FN L I G K D+ + + + PD +
Sbjct: 59 MNVLDEMLLPESEFRPNDKTAGIVFNNLLKIDGLEGRVKEDEIAGLVSKFGKHNIFPDTI 118
Query: 303 SYTCFIEHYCRE-----------------------------------KDFRKVDDTLKEM 327
+ T I CR ++F K++ +++M
Sbjct: 119 ALTQLISKLCRSGNTNLAWNILDNLMMLNGLKDAAPCNALLTGLGKAREFGKMNLLMRKM 178
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK------------------------ 363
++ +P+VIT+ I+++ L K ++I++AL+V+EKMK
Sbjct: 179 KDMNIQPTVITFGILINHLCKFRRIDDALEVFEKMKGEKEETKVFVAPDTIMYNTLIDGL 238
Query: 364 -----------------SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
SD C P T+ ++ LI ++G ++ A+++F +M+ + PNV
Sbjct: 239 CKVGRQEEALCLMGKMRSDQCAPTTATFNCLINGYCRSGEIEVAHKLFNEMENAQIEPNV 298
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+T NT++ C + A++ + M++ K + TY + C M L
Sbjct: 299 ITLNTLVDGMCKHNRISTAVEFFRVMQQKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDE 358
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML-EEKLEKKR 525
M K+ DA Y +L+ GL ++G+L+ A S ++ G Y +L E +K +
Sbjct: 359 MSKDGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKNK 418
Query: 526 LGNAKERINKL-LAHAK 541
L A+E +N++ LA K
Sbjct: 419 LDRAQEWLNEMELAGVK 435
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 124/287 (43%), Gaps = 10/287 (3%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
N+LV+ + N ++ A FF + Q G Y ++ E + E
Sbjct: 302 NTLVDGMCKH--NRISTAVEFFRVMQ-QKGLKGNNVTYTVFINAFCNVNNMNKAMEFLDE 358
Query: 187 MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
M + + + T++ L + GR DDA +K+ G D +VL+ K N
Sbjct: 359 MSK-DGCFPDAVVYYTLICGLAQAGRLDDASSVVSKLKEAGFCLDRVCYNVLISEFCKKN 417
Query: 247 SVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ-GFSPDVVS 303
++ A + +E P S +N LI + K A K MK+M ++ G SP V +
Sbjct: 418 KLDRAQEWLNEMELAGVKP-DSVTYNTLISYFSKIGNFKLAHKFMKKMTEEEGLSPTVFT 476
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCK--PSVITYTIVMHALGKAKQINEALKVYEK 361
Y I YC + + KEM K P+ + Y I++ +L K Q+N AL + +
Sbjct: 477 YGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQVNFALSLLDD 536
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
MK +P+T+ Y+S+ L + A ++ + M +Q P+ +T
Sbjct: 537 MKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYIT 583
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 4/191 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ + + D A E M+ GV+ D+ + L+ K + + A+K + +
Sbjct: 407 NVLISEFCKKNKLDRAQEWLNEMELAGVKPDSVTYNTLISYFSKIGNFKLAHKFMKKMTE 466
Query: 261 CIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEM--FQQGFSPDVVSYTCFIEHYCREKD 316
LS +F LIH +C +D+A K KEM P+ V Y I+ C++
Sbjct: 467 EEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIYNILIDSLCKQTQ 526
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
L +M+ +G P+ TY + AL +++A K+ ++M C PD
Sbjct: 527 VNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVEQACNPDYITMEI 586
Query: 377 LIFILSKAGRV 387
L LS G +
Sbjct: 587 LTEWLSAVGEI 597
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 5/203 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ YN ++ K K E + EM EL T +T++ + G +
Sbjct: 396 EAGFCLDRVCYNVLISEFCKKNKLDRAQEWLNEM-ELAGVKPDSVTYNTLISYFSKIGNF 454
Query: 214 DDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC---IPLSSQIF 269
A + + M ++ G+ L+ N+++ A K+F E + +P ++ I+
Sbjct: 455 KLAHKFMKKMTEEEGLSPTVFTYGALIHAYCLNNNIDEAIKIFKEMNNVASKVPPNTVIY 514
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
NILI CK +V+ A + +M +G P+ +Y + + K + M E
Sbjct: 515 NILIDSLCKQTQVNFALSLLDDMKFRGVMPNTTTYNSIFKALRDKNWLDKAFKLMDRMVE 574
Query: 330 KGCKPSVITYTIVMHALGKAKQI 352
+ C P IT I+ L +I
Sbjct: 575 QACNPDYITMEILTEWLSAVGEI 597
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/458 (24%), Positives = 208/458 (45%), Gaps = 30/458 (6%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
D+ + KI+ + + K+V +++ V + L D A FF WA +Q
Sbjct: 42 DIGSLRKIIQQDLWNDPKIVVLFDS---ALAPIWVSKILLGLREDPKLALKFFKWAGSQV 98
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM---DELNNGY-----------------V 195
G+ HT E Y +V ++ +++ + + VKE+ ++ G+
Sbjct: 99 GFRHTTESYCIIVHLVFRARMYTDAHDTVKEVIMNSRMDMGFPVCNIFDMLWSTRNICVS 158
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ V G ++A E F M+ + R+ + L+ L K + + K F
Sbjct: 159 GSGVFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFF 218
Query: 256 LEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ I S +N++I CK ++++++ +M + G SPDVV+Y I+ Y +
Sbjct: 219 NDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKV 278
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+V EM++ GC P +ITY +++ K +++ A + + +MK++ P+ Y
Sbjct: 279 GSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTY 338
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S+LI K G ++ A ++ DM++ G++PN TY ++I + C A KLL M +
Sbjct: 339 STLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQ 398
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
K + TY LL C+ RM + M K+ +S + Y +LV G I++ ++E
Sbjct: 399 AGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMED 458
Query: 495 ACSFFEEMISKGIVPYHSTYKML------EEKLEKKRL 526
A ++M I P Y + + KLE+ +L
Sbjct: 459 AMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKL 496
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 92/328 (28%), Positives = 162/328 (49%), Gaps = 3/328 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T + ++ L + G +++ F M++ G+ D + L+D K S+E +F
Sbjct: 229 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 288
Query: 256 LEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E KD C+P +N LI+ +CK K+ A + EM G P+VV+Y+ I+ +C+
Sbjct: 289 NEMKDVGCVP-DIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCK 347
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E + L +M+ G P+ TYT ++ A KA + EA K+ M +
Sbjct: 348 EGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 407
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++L+ L KAGR+ +A E+F M K G+ PN Y ++ E+A+K+L++M
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 467
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E KPD Y ++ C +++++ +L M +S + +++ ++GK
Sbjct: 468 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 527
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKL 521
A +FF+EM G+ TY +L + L
Sbjct: 528 DALNFFQEMQDVGVEATIVTYCVLIDGL 555
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 188/398 (47%), Gaps = 10/398 (2%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE---LNNGYVSLATM 200
AF +F+ K G Y+T++D K +L+ +M L N + T
Sbjct: 319 AFEYFSEMKNN-GLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEF----TY 373
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FK 259
++++ + G +A + M + GV+ + + L+D L K + A +VF K
Sbjct: 374 TSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLK 433
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
D I + Q++ L+HG+ K +++DA K +K+M + PD++ Y I +C ++ +
Sbjct: 434 DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEE 493
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
L+EM+ +G + + T ++ A KA + ++AL +++M+ Y LI
Sbjct: 494 TKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLID 553
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L +AG V+ A + F M G+ PNV Y ++I C + E+A KL +M+ P
Sbjct: 554 GLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTP 613
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D + L+ + ++ L++ M + + D Y SLV G + G+L A FF
Sbjct: 614 DITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFF 673
Query: 500 EEMISKGIVPYHST-YKMLEEKLEKKRLGNAKERINKL 536
EMI KGI+P +L E ++ +L A E N++
Sbjct: 674 NEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEM 711
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 90/212 (42%), Gaps = 1/212 (0%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
MK G+ + + ++D K A F E +D + + + +LI G C+
Sbjct: 501 MKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGI 560
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V+ A M G P+V YT I+ C EMQ +G P + +T
Sbjct: 561 VELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTA 620
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ K + EAL + +M D Y+SL+ S+ G + A + F +M ++G
Sbjct: 621 LIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 680
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKME 433
++P + ++ R + + A++L +ME
Sbjct: 681 ILPEEVLCICLLREYYKRGQLDEAIELKNEME 712
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 93/200 (46%), Gaps = 1/200 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+TI+ + G+ DA+ F+ M+ GVE VL+D L + VE A F
Sbjct: 514 TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLS 573
Query: 261 C-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ + ++ LI G C ++ A+K EM +G +PD+ ++T I+ + + ++
Sbjct: 574 LGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 633
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ M E + + YT ++ + ++++A K + +M LP+ L+
Sbjct: 634 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 693
Query: 380 ILSKAGRVKDANEIFEDMKK 399
K G++ +A E+ +M++
Sbjct: 694 EYYKRGQLDEAIELKNEMER 713
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/315 (19%), Positives = 126/315 (40%), Gaps = 43/315 (13%)
Query: 56 DSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKIL-----SKQYQS 110
D SP++ + G++++ R+ + +I ++ N + D+ I+ ++ +
Sbjct: 434 DGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEE 493
Query: 111 PDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
++E +K G+S + P + T++D
Sbjct: 494 TKLILEEMKSRGISAN----------------------------------PVISTTIIDA 519
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
K+ K +EM ++ ++ T ++ L G + AV+ F M G++
Sbjct: 520 YFKAGKSSDALNFFQEMQDVGVE-ATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQP 578
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKA 288
+ + L+D L N +E A K+F E + C ++ I F LI G K + +A
Sbjct: 579 NVAVYTSLIDGLCXNNCIESAKKLFDEMQ-CRGMTPDITAFTALIDGNLKHGNLQEALVL 637
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+ M + D+ YT + + + + + EM EKG P + ++ K
Sbjct: 638 ISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYK 697
Query: 349 AKQINEALKVYEKMK 363
Q++EA+++ +M+
Sbjct: 698 RGQLDEAIELKNEME 712
>gi|222625312|gb|EEE59444.1| hypothetical protein OsJ_11623 [Oryza sativa Japonica Group]
Length = 589
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 144/277 (51%), Gaps = 2/277 (0%)
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K V A ++ E + +PLS + + L++GWC+ K+D+A+ + M +PDVV
Sbjct: 160 AKTGHVAVAEQLVEELQPRLPLSLRHYTALLYGWCRMGKLDEAKHVLARMKAAEVAPDVV 219
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+ + + + F + +EM+ +GC P+ ++YT +M LG +++EA++V+ +M
Sbjct: 220 VFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFVEM 279
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+ C PD+ Y +L+ KAGR+ E + M ++G+ + Y + + +
Sbjct: 280 RRKGCAPDSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKKEQL 339
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
E L+L+++M E C PD Y ++++ C+ K L M N++S T+A +
Sbjct: 340 EECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTFAIM 399
Query: 483 VRGLIESGKLELACSFFEEMISKG--IVPYHSTYKML 517
V GL+ G L AC +F++M+ +G + P + K L
Sbjct: 400 VTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDL 436
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 155/352 (44%), Gaps = 15/352 (4%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ +T++ V GR++DA E R M++ G + + + LM L V+ A +VF+
Sbjct: 218 VVVFNTLLAGFVADGRFEDAFELAREMERRGCPPNAVSYTTLMQGLGARGRVDEAMRVFV 277
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E K C P S + L+ +CK ++ + + M ++G D Y F + ++
Sbjct: 278 EMRRKGCAP-DSVTYGTLVTAFCKAGRISQGYEFLDVMAREGLRVDAGVYLGFFVAHEKK 336
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + + ++ M+E C P + Y +V+ K + +A+ ++ +M++++ P +
Sbjct: 337 EQLEECLELMERMRECRCPPDLSIYNVVIRLACKLGETKQAVALWNEMETNELSPGVDTF 396
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQG--VVPNVLTYNTMISSACARSEEENALKLLQKM 432
+ ++ L G + +A F+DM +G V P +++S + E A + +
Sbjct: 397 AIMVTGLVGQGVLVEACGYFKDMVGRGLFVAPQYGVLKDLLNSLVRDQKLELAKDVWGCI 456
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
C+ + + + KK +K M + T+A L++GL +
Sbjct: 457 MTKGCELNFGAWTIWIHALYAKKHVKEACMYCLDMLDAGLMPQPDTFAKLMKGLKKLYNR 516
Query: 493 ELACSFFEEMISKGIVPYHSTYKM--------LEEKLEKKR-LGNAKERINK 535
++A E+ + K H ++KM LEEK + KR G + R+ +
Sbjct: 517 QIAAEITEK-VRKMAEERHVSFKMYKRRGVRDLEEKPKAKRKKGQKRSRLRQ 567
>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Brachypodium distachyon]
Length = 628
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/416 (25%), Positives = 187/416 (44%), Gaps = 40/416 (9%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF WA + Y H Y ++ L +++ MW++++EM V+ +S I+R
Sbjct: 105 FFRWAAKKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRM 164
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---CIP 263
L AV F +K + +A + ++ L+ E ++++ E + C P
Sbjct: 165 LGNAKMISKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFP 224
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ ++ LI +CK + D A + + EM G P YT I + + +
Sbjct: 225 -DTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGL 283
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+EM+ + C+P V TYT ++ LGKA + +EA + +M+ + C PDT +++I L K
Sbjct: 284 FEEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGK 343
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA--------------------------- 416
AGR+ DA ++FE+M +P+V+TYNT+I +
Sbjct: 344 AGRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPF 403
Query: 417 ---------CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
C + E A+ LL++M+E P Y L+ + KR + + L +
Sbjct: 404 TYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQEL 463
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+N S A YA +++ L ++G+L+ A + F+EM G P Y L L +
Sbjct: 464 KENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLAR 519
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 164/328 (50%), Gaps = 4/328 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++R L + GR+D+A F M++ G DT ++ +++ L K ++ A K+F E
Sbjct: 298 TYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEM 357
Query: 259 K--DCIPLSSQIFNILIHGWCKTR-KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
CIP S +N +I +++ ++ + + M G SP +Y+ I+ +C+
Sbjct: 358 GTLQCIP-SVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTN 416
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
K L+EM EKG P Y ++ ALGKAK+ + A ++++++K + Y+
Sbjct: 417 RTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYA 476
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I L KAGR+ DA +F++M K G PNV YN ++S + AL +++M+E
Sbjct: 477 VMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEH 536
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C PD +Y +L + +L++M ++ + DA +Y +++ + +G E A
Sbjct: 537 GCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEA 596
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+EM G TY + E + K
Sbjct: 597 AKLMKEMNVLGFEYDLITYSSILEAIGK 624
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 176/389 (45%), Gaps = 13/389 (3%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
T + YN+M+ +L ++ + EL EM + + T S ++ + GR D A+
Sbjct: 189 TAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRL 248
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWC 277
MK G++ + ++L+ K N+V A +F E + C P + LI G
Sbjct: 249 LNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRP-DVFTYTELIRGLG 307
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG---CKP 334
K + D+A EM ++G PD V I + ++DD +K +E G C P
Sbjct: 308 KAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAG---RLDDAVKLFEEMGTLQCIP 364
Query: 335 SVITYTIVMHALGKAK-QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
SV+TY ++ AL ++K +I+E +E+MK P YS LI K R + A +
Sbjct: 365 SVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMML 424
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
E+M ++G P Y ++I + + A +L Q+++E+ YA ++K +
Sbjct: 425 LEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGK 484
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
R+ L M K + + Y +L+ GL +G L+ A + M G +P ++
Sbjct: 485 AGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINS 544
Query: 514 YKMLEEKLEKKRLGNAKERINKLLAHAKE 542
Y ++ L K R ++L++ K+
Sbjct: 545 YNIILNGLAKT---GGPHRAMEMLSNMKQ 570
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 4/197 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ P Y +++D LGK+K++ + EL +E+ E N G S + +++ L + GR
Sbjct: 430 EKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKE-NCGSSSARVYAVMIKHLGKAGRL 488
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNI 271
DDAV F M K G + A + LM L + ++ A ++ CIP +NI
Sbjct: 489 DDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIP-DINSYNI 547
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+++G KT A + + M Q PD VSY + F + +KEM G
Sbjct: 548 ILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEMNVLG 607
Query: 332 CKPSVITYTIVMHALGK 348
+ +ITY+ ++ A+GK
Sbjct: 608 FEYDLITYSSILEAIGK 624
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 186/369 (50%), Gaps = 4/369 (1%)
Query: 159 HTPEMY--NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
H P++ NT+V+ L S K L+ +M E + T ++ + + G+ A
Sbjct: 287 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG-CQPNAVTYGPVLNVMCKSGQTALA 345
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHG 275
+E R M++ ++ D S+++D L K S+++A+ +F E + I + +NILI G
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+C + DD K +++M ++ +P+VV+++ I+ + +E R+ ++ KEM +G P
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 465
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
ITYT ++ K +++A ++ + M S C P+ ++ LI KA R+ D E+F
Sbjct: 466 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 525
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M +GVV + +TYNT+I C + A +L Q+M P+ TY LL C
Sbjct: 526 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 585
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ + + K+ + +D G Y ++ G+ + K++ A F + KG+ P TY
Sbjct: 586 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 645
Query: 516 MLEEKLEKK 524
++ L KK
Sbjct: 646 IMIGGLCKK 654
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 132/256 (51%), Gaps = 3/256 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV- 254
++ T S ++ V+ G+ +A E + M G+ DT + L+D K N ++ A ++
Sbjct: 430 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 489
Query: 255 -FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ K C P + + FNILI+G+CK ++DD + ++M +G D V+Y I+ +C
Sbjct: 490 DLMVSKGCDP-NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 548
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ +EM + P+++TY I++ L + +AL+++EK++ D
Sbjct: 549 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 608
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ +I + A +V DA ++F + +GV P V TYN MI C + A L +KME
Sbjct: 609 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 668
Query: 434 EDLCKPDCETYAPLLK 449
ED PD TY L++
Sbjct: 669 EDGHAPDGWTYNILIR 684
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 164/366 (44%), Gaps = 8/366 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++D L K + L EM E+ ++ T + ++ GR+DD + R M
Sbjct: 364 YSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 422
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
K + + SVL+D+ VK + A ++ E I + + LI G+CK +
Sbjct: 423 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 482
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSVITY 339
D A + + M +G P++ ++ I YC+ ++DD L ++M +G +TY
Sbjct: 483 DKANQMVDLMVSKGCDPNIRTFNILINGYCKAN---RIDDGLELFRKMSLRGVVADTVTY 539
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ + ++N A +++++M S P+ Y L+ L G + A EIFE ++K
Sbjct: 540 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 599
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+ ++ YN +I C S+ ++A L + KP +TY ++ C+K +
Sbjct: 600 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 659
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L M ++ + D TY L+R + G + EE+ G ST KM+ +
Sbjct: 660 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 719
Query: 520 KLEKKR 525
L +
Sbjct: 720 MLSDDK 725
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 122/237 (51%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA ++M P V+ ++ + K + V K+M+ KG ++ T +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + +++ A K+ P+T +S+LI L GRV +A E+ + M +
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+++T NT+++ C +E A+ L+ KM E C+P+ TY P+L + C+ + +
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + ++ +DA Y+ ++ GL + G L+ A + F EM KGI TY +L
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 402
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 179/401 (44%), Gaps = 29/401 (7%)
Query: 137 FSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS 196
F L AF K TG++ ++ + + + G+ + E +KE+D ++G +
Sbjct: 81 FDRQLRDAFKVLD--KEGTGFVAVADLRHILTSI-GEKLEPNEFDEWIKEVDVGSDGKIR 137
Query: 197 ----LATMSTIMRRL-----VRGG----RYDDAVEAFRGMKKYGVEKDTRALSVLMD--T 241
+A M R L +R G + DDA++ FR M +R L ++D
Sbjct: 138 YEDFIARMVANDRNLSYRERLRSGLVDIKADDAIDLFRDMIH------SRPLPTVIDFSR 191
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLSSQIFN-----ILIHGWCKTRKVDDAQKAMKEMFQQG 296
L + Y + L + L N I+I+ +C+ RK+ A AM ++ + G
Sbjct: 192 LFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLG 251
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
+ P+ ++++ I C E + + + M E G KP +IT +++ L + + EA+
Sbjct: 252 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 311
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ +KM C P+ Y ++ ++ K+G+ A E+ M+++ + + + Y+ +I
Sbjct: 312 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 371
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
C +NA L +ME + TY L+ C R LL M K ++ +
Sbjct: 372 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 431
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
T++ L+ ++ GKL A +EMI +GI P TY L
Sbjct: 432 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 472
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 137/286 (47%), Gaps = 4/286 (1%)
Query: 258 FKDCI---PLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
F+D I PL + I F+ L KT++ D K+M +G + ++ + + I +CR
Sbjct: 174 FRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCR 233
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + ++ + G +P+ IT++ +++ L +++EAL++ ++M PD
Sbjct: 234 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 293
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
++L+ L +G+ +A + + M + G PN +TY +++ C + A++LL+KME
Sbjct: 294 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 353
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E K D Y+ ++ C+ + L M ++ + TY L+ G +G+ +
Sbjct: 354 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 413
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
+MI + I P T+ +L + K+ E ++K + H
Sbjct: 414 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 459
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 179/373 (47%), Gaps = 16/373 (4%)
Query: 166 TMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK 225
T V +L F W L+ LA + ++RR R GR A+ AF+ +++
Sbjct: 75 TAVSLLASRGLFAAAWRLLLAPSPTPP---PLAAFAPLVRRYARLGRAPAALRAFQFLRR 131
Query: 226 ----YGVEKDTRA----LSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS---QIFNILIH 274
Y D A L++ +D L K A ++F ++ P S + +NIL+H
Sbjct: 132 HPDRYMAGGDIPAAASLLNMAVDALCKEGHPRAAVELFERWRREEPDSPPDERAYNILLH 191
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
GW + ++D K EM G P VV+Y IE C ++ + L EM+E+G +
Sbjct: 192 GWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEA 251
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+++T +++AL +A + +A KV EK P+ S ++SL+ K G + A+ +
Sbjct: 252 NLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVL 311
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ M ++G+ P TYN + S+ E+ + KM + PD TY L+KM R
Sbjct: 312 KVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRA 371
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
R++++ ++ M + D T L+ L + E AC+ FE+M +GIVP + TY
Sbjct: 372 NRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITY 431
Query: 515 KMLEEKLEKKRLG 527
+ L +L KRLG
Sbjct: 432 QKLMREL--KRLG 442
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/170 (20%), Positives = 73/170 (42%), Gaps = 1/170 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+++T ++++ + G A + M + G+ TR + T K + VE +
Sbjct: 287 NISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFY 346
Query: 256 LEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ Q+ + +L+ + +++ + ++EM GF PD+ + T I CR
Sbjct: 347 SKMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRR 406
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
F + ++M ++G P ITY +M L + + K+ M+S
Sbjct: 407 HQFEEACAEFEDMFKRGIVPQYITYQKLMRELKRLGLVRLIQKLTNLMRS 456
>gi|334182677|ref|NP_001185030.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191659|gb|AEE29780.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 886
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 183/365 (50%), Gaps = 7/365 (1%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V+ +S +L + P EAL+ G+ + Q L++ ND A GFF W K Q G
Sbjct: 302 VENVSSVLRRFRWGP-AAEEALQNLGLRIDAYQANQVLKQM-NDYGNALGFFYWLKRQPG 359
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDD 215
+ H Y TMV LG++K+F + +L+ EM + +G + T + ++ R ++
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEM--VRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIH 274
A+ F M++ G + D L+D K ++ A ++ + + + ++++I+
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
K + A K EM QG +P++V+Y ++ + + ++++ ++MQ G +P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+TY+IVM LG + EA V+ +M+ + +PD Y L+ + KAG V+ A + +
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ M G+ PNV T N+++S+ ++ A +LLQ M +P +TY LL CC
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTD 656
Query: 455 KRMKV 459
R K+
Sbjct: 657 GRSKL 661
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 169/350 (48%), Gaps = 11/350 (3%)
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT-RALSVLMDTLVKGNSVE 249
N+G++ + +S+++RR R+ A E ++ G+ D +A VL GN++
Sbjct: 297 NSGHI-VENVSSVLRRF----RWGPAAE--EALQNLGLRIDAYQANQVLKQMNDYGNALG 349
Query: 250 HAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
Y +L+ + + ++ + ++ K + EM + G P+ V+Y I
Sbjct: 350 FFY--WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIH 407
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
Y R + + +MQE GCKP +TY ++ KA ++ A+ +Y++M++ P
Sbjct: 408 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
DT YS +I L KAG + A+++F +M QG PN++TYN M+ +NALKL
Sbjct: 468 DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ M+ +PD TY+ ++++ ++ + T M + + D Y LV ++
Sbjct: 528 RDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 490 GKLELACSFFEEMISKGIVPYHST-YKMLEEKLEKKRLGNAKERINKLLA 538
G +E A +++ M+ G+ P T +L L ++ A E + +LA
Sbjct: 588 GNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA 637
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 41/282 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ +++ LGK+ +L EM ++ G +L T + +M + Y +A++ +R
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEM--VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M+ G E D S++M+ L +E A VF E K+ IP ++ +L+ W K
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP-DEPVYGLLVDLWGKAG 588
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V+ A + + M G P+V + + + R + + L+ M G +PS+ TYT
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 341 IVMHA---------LGKAKQI--------------------------NEALKVYEKMKSD 365
+++ +G Q+ N A + M S+
Sbjct: 649 LLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSE 708
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
D +++ L K+G+ ++A ++E ++ V P+ L
Sbjct: 709 DRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 197/420 (46%), Gaps = 46/420 (10%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVRGGRY 213
+TP++ Y+T+V+ + + +W+L++ M N Y+ +I+ L R +
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI----YGSIIGLLCRICKL 775
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIP-------- 263
+A EAF M + G+ DT + L+D K + A K F E +D P
Sbjct: 776 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 835
Query: 264 --------------------------LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
S F LI+G+CK + DA + M Q G
Sbjct: 836 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 895
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
SP+VV+YT I+ C+E D ++ L EM + G +P++ TY +++ L K+ I EA+K
Sbjct: 896 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 955
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ + ++ DT Y++L+ K+G + A EI ++M +G+ P ++T+N +++ C
Sbjct: 956 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 1015
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E+ KLL M P+ T+ L+K C + +K + M V D
Sbjct: 1016 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 1075
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK-LEKKRLGNAKERINKL 536
TY +LV+G ++ ++ A F+EM KG STY +L + L++K+ A+E +++
Sbjct: 1076 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 1135
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 153/330 (46%), Gaps = 1/330 (0%)
Query: 189 ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
EL + + ST++ R G D + MK+ G++ ++ ++ L + +
Sbjct: 716 ELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKL 775
Query: 249 EHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
A + F E + I + ++ LI G+CK + A K EM + +PDV++YT
Sbjct: 776 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 835
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I +C+ D + EM KG +P +T+T +++ KA + +A +V+ M C
Sbjct: 836 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 895
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P+ Y++LI L K G + ANE+ +M K G+ PN+ TYN++++ C E A+K
Sbjct: 896 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 955
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L+ + E D TY L+ C+ M +L M + T+ L+ G
Sbjct: 956 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 1015
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKML 517
G LE M++KGI P +T+ L
Sbjct: 1016 LHGMLEDGEKLLNWMLAKGIAPNATTFNSL 1045
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 8/331 (2%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG-NSVEHAYKVFLEFKD---CI 262
LV G +A F M YG+ + +V + L K A VF EF + C
Sbjct: 628 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 687
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
++S +NI+IH C+ ++ +A + M +G++PDV+SY+ + YCR + KV
Sbjct: 688 NVAS--YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 745
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
++ M+ KG KP+ Y ++ L + ++ EA + + +M LPDT Y++LI
Sbjct: 746 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 805
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K G ++ A++ F +M + + P+VLTY +IS C + A KL +M +PD
Sbjct: 806 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 865
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
T+ L+ C+ MK + HM + S + TY +L+ GL + G L+ A EM
Sbjct: 866 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 925
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
G+ P TY + L K GN +E +
Sbjct: 926 WKIGLQPNIFTYNSIVNGLCKS--GNIEEAV 954
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 162/324 (50%), Gaps = 3/324 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++A+ + ++ + + GR +A M+ G D + S +++ + ++ +K+
Sbjct: 688 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 747
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
++ K P +S I+ +I C+ K+ +A++A EM +QG PD V YT I+ +C+
Sbjct: 748 EVMKRKGLKP-NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 806
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D R EM + P V+TYT ++ + + EA K++ +M PD+
Sbjct: 807 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 866
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
++ LI KAG +KDA + M + G PNV+TY T+I C + ++A +LL +M
Sbjct: 867 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 926
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+ +P+ TY ++ C+ ++ L+ ++ D TY +L+ +SG+++
Sbjct: 927 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 986
Query: 494 LACSFFEEMISKGIVPYHSTYKML 517
A +EM+ KG+ P T+ +L
Sbjct: 987 KAQEILKEMLGKGLQPTIVTFNVL 1010
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 5/152 (3%)
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT---YNTMISSACARSEE 422
D D + +L G +++A +FE M G+V +V + Y T +S C ++
Sbjct: 613 DWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT-- 670
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
A+ + ++ E + +Y ++ C+ R+K + LL M + D +Y+++
Sbjct: 671 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 730
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
V G G+L+ E M KG+ P Y
Sbjct: 731 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 762
>gi|15221893|ref|NP_173324.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|42571539|ref|NP_973860.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75151479|sp|Q8GYP6.1|PPR49_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18900
gi|26450017|dbj|BAC42129.1| unknown protein [Arabidopsis thaliana]
gi|28827402|gb|AAO50545.1| unknown protein [Arabidopsis thaliana]
gi|332191657|gb|AEE29778.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332191658|gb|AEE29779.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 183/365 (50%), Gaps = 7/365 (1%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V+ +S +L + P EAL+ G+ + Q L++ ND A GFF W K Q G
Sbjct: 302 VENVSSVLRRFRWGP-AAEEALQNLGLRIDAYQANQVLKQM-NDYGNALGFFYWLKRQPG 359
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDD 215
+ H Y TMV LG++K+F + +L+ EM + +G + T + ++ R ++
Sbjct: 360 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEM--VRDGCQPNTVTYNRLIHSYGRANYLNE 417
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIH 274
A+ F M++ G + D L+D K ++ A ++ + + + ++++I+
Sbjct: 418 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 477
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
K + A K EM QG +P++V+Y ++ + + ++++ ++MQ G +P
Sbjct: 478 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 537
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+TY+IVM LG + EA V+ +M+ + +PD Y L+ + KAG V+ A + +
Sbjct: 538 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 597
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ M G+ PNV T N+++S+ ++ A +LLQ M +P +TY LL CC
Sbjct: 598 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTD 656
Query: 455 KRMKV 459
R K+
Sbjct: 657 GRSKL 661
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 169/350 (48%), Gaps = 11/350 (3%)
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT-RALSVLMDTLVKGNSVE 249
N+G++ + +S+++RR R+ A E ++ G+ D +A VL GN++
Sbjct: 297 NSGHI-VENVSSVLRRF----RWGPAAE--EALQNLGLRIDAYQANQVLKQMNDYGNALG 349
Query: 250 HAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
Y +L+ + + ++ + ++ K + EM + G P+ V+Y I
Sbjct: 350 FFY--WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIH 407
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
Y R + + +MQE GCKP +TY ++ KA ++ A+ +Y++M++ P
Sbjct: 408 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 467
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
DT YS +I L KAG + A+++F +M QG PN++TYN M+ +NALKL
Sbjct: 468 DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 527
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ M+ +PD TY+ ++++ ++ + T M + + D Y LV ++
Sbjct: 528 RDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 587
Query: 490 GKLELACSFFEEMISKGIVPYHST-YKMLEEKLEKKRLGNAKERINKLLA 538
G +E A +++ M+ G+ P T +L L ++ A E + +LA
Sbjct: 588 GNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA 637
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 41/282 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ +++ LGK+ +L EM ++ G +L T + +M + Y +A++ +R
Sbjct: 472 YSVIINCLGKAGHLPAAHKLFCEM--VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 529
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M+ G E D S++M+ L +E A VF E K+ IP ++ +L+ W K
Sbjct: 530 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP-DEPVYGLLVDLWGKAG 588
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V+ A + + M G P+V + + + R + + L+ M G +PS+ TYT
Sbjct: 589 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 648
Query: 341 IVMHA---------LGKAKQI--------------------------NEALKVYEKMKSD 365
+++ +G Q+ N A + M S+
Sbjct: 649 LLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSE 708
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
D +++ L K+G+ ++A ++E ++ V P+ L
Sbjct: 709 DRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 750
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 208/444 (46%), Gaps = 16/444 (3%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSN---DLTPAFGFFTWA 151
+DV I IL+ P+ K S +LV T+ R D+ + FF W
Sbjct: 3 SDVSGIVAILTSVGDRPEAEAALAK-----YSRNLVPNTVGRVLQVIKDVDVSLFFFRWV 57
Query: 152 -KTQTG-YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY--VSLATMSTIMRRL 207
++ G +H N ++ L K+++ +++ + DEL + + T +T++
Sbjct: 58 TRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFR--DELLGQHCDTNHITYNTLIGGF 115
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ 267
+ G + A + MK+ G D S ++ L ++ A + F E +C P S
Sbjct: 116 CKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECAP-DSV 174
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+FNIL+HG CK ++ +A++ ++EM ++G PDVV+Y I+ C+ + L+ M
Sbjct: 175 LFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETM 234
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++ +P+++TY +++ K A ++ E+M PD ++SLI + ++
Sbjct: 235 VKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKI 294
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A E+ MKK PN++TYN +IS C A +LL +M+ PD TY L
Sbjct: 295 DKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSL 354
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + CR +++ + M + V D +Y +L L++S + + A + + M G
Sbjct: 355 IGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGA 414
Query: 508 VPYHSTYKMLEEKL-EKKRLGNAK 530
+P T+ L E L +RL A+
Sbjct: 415 IPNLFTFNSLMEGLCCSRRLDEAR 438
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 181/397 (45%), Gaps = 39/397 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ K+ ++L+ EM E + + T S+I++ L G A++ FR
Sbjct: 108 YNTLIGGFCKAGDMERAFQLLAEMKERGHS-PDVVTHSSIVQALCNTGNLSRAMQYFR-- 164
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSSQI--------- 268
+ D+ ++L+ L K N + A ++ E D + +S I
Sbjct: 165 ESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRM 224
Query: 269 ---------------------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
+N LI+G+CKT A + ++ M Q G PDVV++
Sbjct: 225 EEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSL 284
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I +C++ K + L M++ C P+++TY +++ L A + NEA ++ +M
Sbjct: 285 ISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGI 344
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
LPD Y+SLI I + +++ A +I M ++GV+P+ ++Y T+ + + A
Sbjct: 345 LPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFA 404
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
LL M + P+ T+ L++ C +R+ LL M + A TY LV GL
Sbjct: 405 LLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLC 464
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
++G+++ A M+S+GI P S+ + L ++
Sbjct: 465 KAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLARE 501
>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 761
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 117/387 (30%), Positives = 180/387 (46%), Gaps = 19/387 (4%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
++D+ K K EL++ M + + + T ST+++ L R +A + F MK
Sbjct: 14 GVLIDMFCKEGKVIEANELLEVMVQ-RGCILDIVTYSTLIKGLCMKHRISEATQLFMSMK 72
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--------CIPLSSQIFNILIHGW 276
K G D A LM L + + A + E + C P ++I+I G
Sbjct: 73 KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVS-YSIIIDGL 131
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK R+ D+A++ KEM QG PDV+SYT I +CR + K EM + G + V
Sbjct: 132 CKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSDV 191
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
T ++++ L K ++ EA ++ E M C+ D YS+LI L R+ +A +F
Sbjct: 192 TTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMS 251
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL------CKPDCETYAPLLKM 450
M+K G P+ + Y T++ C AL+L Q+M D CKP +Y+ ++
Sbjct: 252 MQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDG 311
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ +R L M + D +Y +L+ G SGK E A F EM+ GI P
Sbjct: 312 LCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPD 371
Query: 511 HSTYKMLEEKLEKKRLGNAKERINKLL 537
+T +L + L KK G E NKLL
Sbjct: 372 VTTSSVLIDMLCKK--GKVIEA-NKLL 395
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 109/372 (29%), Positives = 179/372 (48%), Gaps = 16/372 (4%)
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
++D+L K K EL++ M + + + T ST+++ L R +A F M+K
Sbjct: 197 LIDILCKEGKVIEANELLEVMIQ-RGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQKL 255
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--------CIPLSSQIFNILIHGWCK 278
G D A LM L + ++ A ++ E + C P ++I+I G CK
Sbjct: 256 GCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLIS-YSIIIDGLCK 314
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R+ D+A++ KEM QG PDV+SYT I +C + K EM + G +P V T
Sbjct: 315 DRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 374
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
++++ L K ++ EA K+ E + C+PD ++L+ L R+ A ++F M+
Sbjct: 375 SSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQ 434
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL------CKPDCETYAPLLKMCC 452
K G +PNV+T T++ C + AL+L + M D CKP+ +Y+ ++ C
Sbjct: 435 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 494
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ R L M V D +Y SL+ G SGK + A F EM+ G+ P +
Sbjct: 495 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 554
Query: 513 TYKMLEEKLEKK 524
T+ +L + L K+
Sbjct: 555 TFSVLIDMLCKE 566
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/411 (27%), Positives = 198/411 (48%), Gaps = 24/411 (5%)
Query: 144 AFGFFTWAKTQTGYMHTP-EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST 202
A+G QTG ++T +++ M++ G+ C +L + S
Sbjct: 263 AYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKC---------------KPTLISYSI 307
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC- 261
I+ L + R D+A E F+ MK G+ D + + L+ E A +F E D
Sbjct: 308 IIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 367
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
I ++LI CK KV +A K ++ + Q+G PDVV+ T ++ C + K
Sbjct: 368 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKAT 427
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD------DCLPDTSFYS 375
+MQ+ GC P+V+T +M L ++ I AL++++ M SD +C P+ YS
Sbjct: 428 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 487
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I L K GR +A E+F++MK GV+P+V++Y ++I C + ++A L +M +
Sbjct: 488 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI 547
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
+PD T++ L+ M C++ ++ N LL M + + TY +LV+GL + ++ A
Sbjct: 548 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 607
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAKEQKT 545
F +M G +P TY L + L + + A E K+L+ + T
Sbjct: 608 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 658
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 167/335 (49%), Gaps = 15/335 (4%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T +T+++ L R A + F M+K G + + LM L + +++ A ++
Sbjct: 407 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 466
Query: 257 EFK--------DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
+C P ++ ++I+I G CK + D+A++ KEM G PDV+SYT I
Sbjct: 467 NMLSDTSPYGINCKP-NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLI 525
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+CR ++ EM + G +P V T+++++ L K ++ EA ++ E M C+
Sbjct: 526 HGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCI 585
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P+T Y++L+ L R+ +A ++F M+K G +P+V+TY T++ C + AL+L
Sbjct: 586 PNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALEL 645
Query: 429 LQKMEEDLC------KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+KM D KPD +Y+ ++ C+ R L M V + +Y SL
Sbjct: 646 HKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSL 705
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ G SGKLE A F EM+ +G+ TY ++
Sbjct: 706 IHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVM 740
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 165/320 (51%), Gaps = 15/320 (4%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGM----KKYGVEKDTRALS--VLMDTLVKGNSVE 249
++ T +T+M+ L + G A+E + M YG+ A+S +++D L K +
Sbjct: 441 NVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRED 500
Query: 250 HAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
A ++F E K + I + LIHG+C++ K DA+ EM G PDV +++ I
Sbjct: 501 EARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLI 560
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+ C+E + ++ L+ M ++GC P+ +TYT ++ L +I+EA +++ KM+ CL
Sbjct: 561 DMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCL 620
Query: 369 PDTSFYSSLIFILSKAGRVKDANEI----FEDMKKQGV--VPNVLTYNTMISSACARSEE 422
PD Y +L+ L + G +K A E+ D + G P+V++Y+ +I C E
Sbjct: 621 PDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRE 680
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+ A +L ++M+ P+ +Y L+ CR +++ L M V ++A TY+ +
Sbjct: 681 DEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVM 740
Query: 483 VRGLIESGKLELACSFFEEM 502
+ G + G+++ A F++M
Sbjct: 741 IHGFCKEGQIDKA--LFQKM 758
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 146/281 (51%), Gaps = 14/281 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ ++D L K + EL KEM L G + + + ++++ R G++ DA F
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEMKAL--GVIPDVISYTSLIHGFCRSGKWKDAKYLFNE 543
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M GV+ D SVL+D L K V A ++ + + CIP ++ + L+ G C
Sbjct: 544 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP-NTVTYTTLVKGLCMND 602
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE------KGCKP 334
++ +A + +M + G PDVV+Y ++ C+ + + + K+M KP
Sbjct: 603 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 662
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
VI+Y+I++ L K + +EA +++++MK+ +P+ Y+SLI ++G+++DA +F
Sbjct: 663 DVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLF 722
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+M QGV N +TY+ MI C + + A L QKME +
Sbjct: 723 NEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 761
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 121/271 (44%), Gaps = 41/271 (15%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M G PDV + I+ +C+E + ++ L+ M ++GC ++TY+ ++ L +
Sbjct: 1 MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK----------------------- 388
I+EA +++ MK C PD Y +L+ L + G++
Sbjct: 61 ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120
Query: 389 ------------------DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
+A E+F++MK QG++P+V++Y ++I C + E A L
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
+M + + D T + L+ + C++ ++ N LL M + +D TY++L++GL
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
++ A F M G P Y L + L
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGL 271
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/347 (30%), Positives = 172/347 (49%), Gaps = 7/347 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S T ++++ L + GR D A+ M K G D S+L++ L K + ++ A + F
Sbjct: 373 SSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQE-F 431
Query: 256 LEFKD----CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF-QQGFSPDVVSYTCFIEH 310
L+ D S +N L++ CK +KV A M ++ F PDVVSY+ I+
Sbjct: 432 LQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDG 491
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
+C+ + + + K+M + C P+V TY ++ L + +I +A VYE+M + C PD
Sbjct: 492 FCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPD 551
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
YS+LI S A + A+E+FE M +G PN +TYN ++ C S+ + A +L +
Sbjct: 552 VITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFR 611
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
KM E C PD TY LL C +++ + M D Y L++G +G
Sbjct: 612 KMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAG 671
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
K A F+ M+S+ P ++ ++ + L K KRL +A E ++
Sbjct: 672 KPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 154/309 (49%), Gaps = 5/309 (1%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
AF F+ ++ ++ Y+ ++D K + +L K+M +LN ++ T +
Sbjct: 465 AFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNC-VPNVTTYNAF 523
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDC 261
+ L+R GR DA + M G D S L+ + A+++F + + C
Sbjct: 524 LNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGC 583
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
P ++ +N L+HG CK K D+A + ++M ++G PD V+YT + +C +
Sbjct: 584 RP-NAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAV 642
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ EM KG P V+ Y ++ +A + EA ++++ M S C PDT ++ +I L
Sbjct: 643 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGL 702
Query: 382 SKAGRVKDANEIFEDMKK-QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
SKA R+ DA E+FE M++ G P+++TYN++I C A+K+ ++++ PD
Sbjct: 703 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 762
Query: 441 CETYAPLLK 449
+ LL+
Sbjct: 763 PHAFNVLLE 771
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 182/372 (48%), Gaps = 6/372 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD-ELNNGYVSLATMSTIMRRLVRGGRYD 214
GY ++ +++ L K+ K E ++ MD ++++ S + ++++ L + +
Sbjct: 404 GYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVH 463
Query: 215 DAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNI 271
A F M + D + S+L+D K + + A K++ + D C+P + +N
Sbjct: 464 QAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP-NVTTYNA 522
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++G + ++ DAQ +EM G SPDV++Y+ I + + + + + M +G
Sbjct: 523 FLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRG 582
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C+P+ +TY ++H L K + +EA +++ KM C PD Y++L++ G+++ A
Sbjct: 583 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAV 642
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
E+F++M +G P+V+ YN ++ + A +L Q M CKPD ++ ++
Sbjct: 643 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGL 702
Query: 452 CRKKRMKVLNFLLTHMFKN-DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
+ KR+ + M ++ S D TY SL+ GL +L A F+E+ + P
Sbjct: 703 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 762
Query: 511 HSTYKMLEEKLE 522
+ +L E ++
Sbjct: 763 PHAFNVLLEAIK 774
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 151/354 (42%), Gaps = 44/354 (12%)
Query: 214 DDAVEA---FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQI 268
D A+EA FR M K G + D S ++ K +++ A+K+FLE + PL++
Sbjct: 248 DKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVA 307
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ + G CK+ K++ A +A + M Q+ S Y I K ++ E+
Sbjct: 308 WTAFLSGLCKSGKIEQAFEACRTM-QESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIA 366
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+ +PS T V+ L KA +++ AL + E M PD + +S LI L KA +++
Sbjct: 367 GRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQ 426
Query: 389 DANEIFEDMKK--------------------------------------QGVVPNVLTYN 410
+A E + M + + VP+V++Y+
Sbjct: 427 EAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYS 486
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I C E A KL ++M + C P+ TY L RK R+ + M
Sbjct: 487 ILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAA 546
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
S D TY++L+ G + K + A FE MIS+G P TY L L K+
Sbjct: 547 GCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKE 600
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 157/331 (47%), Gaps = 14/331 (4%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T+ +++ L GG +A+ FR ++ + D + L+D L++ ++ A +VF +
Sbjct: 99 TVGAVIKHLRDGG---EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKM 155
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY---TCFIEHYCR 313
+ +P + + +L+ C R D+A + EM +GF P Y T ++ +
Sbjct: 156 VAQGVVP-NGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGK 214
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E +F +V ++++++ ++ ++++ + + K I EA K++ M C PD +
Sbjct: 215 EGEFSRVFG--RDLEKRVAVEMMLKKALLVNFVIQDKAI-EASKLFRAMVKSGCKPDATI 271
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVP-NVLTYNTMISSACARSEEENALKLLQKM 432
YS ++ K + +A ++F +M + P N + + +S C + E A + + M
Sbjct: 272 YSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTM 331
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+E L Y L+++ R+ + ++ +GT S+++ L ++G++
Sbjct: 332 QESLSSSQ-PVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRV 390
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ A S E MI +G P +T+ ML +L K
Sbjct: 391 DSALSLLETMIKRGYCPDMATHSMLINELCK 421
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 151/310 (48%), Gaps = 10/310 (3%)
Query: 236 SVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
++L++ +++ ++E A K+F C P + I++ ++ CK +D+A K EM
Sbjct: 239 ALLVNFVIQDKAIE-ASKLFRAMVKSGCKP-DATIYSYMVLAHCKLENLDEAFKLFLEMA 296
Query: 294 QQGFSP-DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQI 352
+ +P + V++T F+ C+ + + + MQE S Y +++ L ++ +I
Sbjct: 297 VESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES-LSSSQPVYDMLIRLLIESGRI 355
Query: 353 NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
++A + ++ + P + S+I L KAGRV A + E M K+G P++ T++ +
Sbjct: 356 DKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSML 415
Query: 413 ISSACARSEEENALKLLQKMEEDL--CKPDCETYAPLLKMCCRKKRM-KVLNFLLTHMFK 469
I+ C + + A + LQ M+ + C +Y LL C+ K++ + T + +
Sbjct: 416 INELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSE 475
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGN 528
D +Y+ L+ G + +L A +++MI VP +TY L + K R+ +
Sbjct: 476 RSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIAD 535
Query: 529 AKERINKLLA 538
A+ +++A
Sbjct: 536 AQGVYEEMVA 545
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/242 (21%), Positives = 112/242 (46%), Gaps = 9/242 (3%)
Query: 295 QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
+ F DV +Y C ++ R +D ++ ++M +G P+ TY +++ + + +E
Sbjct: 123 RNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDE 182
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF-EDMKKQGVVPNVLTYNTMI 413
A++ + +M P ++ Y + L G+ + + +F D++K+ V +L ++
Sbjct: 183 AVRFFGEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLV 242
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-KVLNFLLTHMFKNDV 472
+ E A KL + M + CKPD Y+ ++ C+ + + + L ++
Sbjct: 243 NFVIQDKAIE-ASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKA 301
Query: 473 SMDAGTYASLVRGLIESGKLEL---ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNA 529
++ + + + GL +SGK+E AC +E +S Y ++L +E R+ A
Sbjct: 302 PLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLL---IESGRIDKA 358
Query: 530 KE 531
+E
Sbjct: 359 EE 360
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 83/198 (41%), Gaps = 12/198 (6%)
Query: 353 NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
EAL + +++ + D Y+ L+ L + +K A ++FE M QGVVPN TY +
Sbjct: 111 GEALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVL 170
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
+ S+C + A++ +M + KP Y + + C K K F + +F D+
Sbjct: 171 VQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTE--CLKATGKEGEF--SRVFGRDL 226
Query: 473 SMDAGT-----YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLG 527
A LV +I+ +E A F M+ G P + Y + L +L
Sbjct: 227 EKRVAVEMMLKKALLVNFVIQDKAIE-ASKLFRAMVKSGCKPDATIYSYM--VLAHCKLE 283
Query: 528 NAKERINKLLAHAKEQKT 545
N E L A E K
Sbjct: 284 NLDEAFKLFLEMAVESKA 301
>gi|259490380|ref|NP_001159198.1| uncharacterized protein LOC100304284 [Zea mays]
gi|223942589|gb|ACN25378.1| unknown [Zea mays]
gi|414865313|tpg|DAA43870.1| TPA: hypothetical protein ZEAMMB73_208601 [Zea mays]
Length = 519
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 215/447 (48%), Gaps = 11/447 (2%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFS---NDLTPAFGFFTW 150
+ DV ++ +I++ +P + AL VS+S+ L++ +RRF D A +
Sbjct: 40 DADVGEVYRIVTSA-ATPSAMESALAASAVSLSSPLLDAVMRRFRFAHGDPLRALSLLSL 98
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A + G +P +T + VLG++++F MW LV + ++ T ++ R+ +
Sbjct: 99 AADRGGIAPSPYAIDTALYVLGRARRFPHMWNLVANTRRICPDALTPRTAMIVLGRVAKV 158
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRAL-SVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF 269
+ V +FR + + D L + L+ TL + S+ A VF K ++ F
Sbjct: 159 CSVRETVASFRCLARLFHTVDPAVLFNALLRTLCQEKSMSDARNVFHALKYEFRVNRHTF 218
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
NIL+ GW + +DA+ + EM + G PD+V+Y I+ +C+ +D +K L EM+
Sbjct: 219 NILLSGW---KSAEDAEAFVTEMRELGVEPDLVTYNSLIDCHCKNRDVQKAYKLLDEMRH 275
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
K P +ITYT ++ LG Q ++A + ++M C PD Y++ I A R+ D
Sbjct: 276 KDISPDIITYTSLIGGLGLIGQPDKAKDLLKEMYELGCYPDVPAYNAAIRNFVIAKRLGD 335
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A + + M +G++PN TYN + +A +L ++M + C P+ ++ +++
Sbjct: 336 AFALMDQMVSKGLMPNPTTYNLFFRCYYWAFDIGSAWRLYERMRSEGCYPNTQSCMFIIR 395
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+C R ++ + L + M + L+ L + GKLE A F +M+ G P
Sbjct: 396 LCHRYGKVALALELWSDMVSSSFGSLTLVSDVLLDLLCDEGKLEDAERCFCQMVELGQKP 455
Query: 510 YHSTYKMLEEKLEKKRLGNAKERINKL 536
+ ++ ++ ++ L +E I +L
Sbjct: 456 SNVAFRRIKILMQ---LAKQEESIARL 479
>gi|8778269|gb|AAF79278.1|AC068602_1 F14D16.2 [Arabidopsis thaliana]
Length = 977
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 183/365 (50%), Gaps = 7/365 (1%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V+ +S +L + P EAL+ G+ + Q L++ ND A GFF W K Q G
Sbjct: 419 VENVSSVLRRFRWGP-AAEEALQNLGLRIDAYQANQVLKQM-NDYGNALGFFYWLKRQPG 476
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDD 215
+ H Y TMV LG++K+F + +L+ EM + +G + T + ++ R ++
Sbjct: 477 FKHDGHTYTTMVGNLGRAKQFGAINKLLDEM--VRDGCQPNTVTYNRLIHSYGRANYLNE 534
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIH 274
A+ F M++ G + D L+D K ++ A ++ + + + ++++I+
Sbjct: 535 AMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSPDTFTYSVIIN 594
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
K + A K EM QG +P++V+Y ++ + + ++++ ++MQ G +P
Sbjct: 595 CLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRDMQNAGFEP 654
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+TY+IVM LG + EA V+ +M+ + +PD Y L+ + KAG V+ A + +
Sbjct: 655 DKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKAGNVEKAWQWY 714
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ M G+ PNV T N+++S+ ++ A +LLQ M +P +TY LL CC
Sbjct: 715 QAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYTLLLS-CCTD 773
Query: 455 KRMKV 459
R K+
Sbjct: 774 GRSKL 778
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 169/350 (48%), Gaps = 11/350 (3%)
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT-RALSVLMDTLVKGNSVE 249
N+G++ + +S+++RR R+ A E ++ G+ D +A VL GN++
Sbjct: 414 NSGHI-VENVSSVLRRF----RWGPAAE--EALQNLGLRIDAYQANQVLKQMNDYGNALG 466
Query: 250 HAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
Y +L+ + + ++ + ++ K + EM + G P+ V+Y I
Sbjct: 467 FFY--WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINKLLDEMVRDGCQPNTVTYNRLIH 524
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
Y R + + +MQE GCKP +TY ++ KA ++ A+ +Y++M++ P
Sbjct: 525 SYGRANYLNEAMNVFNQMQEAGCKPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAGGLSP 584
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
DT YS +I L KAG + A+++F +M QG PN++TYN M+ +NALKL
Sbjct: 585 DTFTYSVIINCLGKAGHLPAAHKLFCEMVDQGCTPNLVTYNIMMDLHAKARNYQNALKLY 644
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ M+ +PD TY+ ++++ ++ + T M + + D Y LV ++
Sbjct: 645 RDMQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIPDEPVYGLLVDLWGKA 704
Query: 490 GKLELACSFFEEMISKGIVPYHST-YKMLEEKLEKKRLGNAKERINKLLA 538
G +E A +++ M+ G+ P T +L L ++ A E + +LA
Sbjct: 705 GNVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLA 754
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 41/282 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ +++ LGK+ +L EM ++ G +L T + +M + Y +A++ +R
Sbjct: 589 YSVIINCLGKAGHLPAAHKLFCEM--VDQGCTPNLVTYNIMMDLHAKARNYQNALKLYRD 646
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M+ G E D S++M+ L +E A VF E K+ IP ++ +L+ W K
Sbjct: 647 MQNAGFEPDKVTYSIVMEVLGHCGYLEEAEAVFTEMQQKNWIP-DEPVYGLLVDLWGKAG 705
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V+ A + + M G P+V + + + R + + L+ M G +PS+ TYT
Sbjct: 706 NVEKAWQWYQAMLHAGLRPNVPTCNSLLSTFLRVNKIAEAYELLQNMLALGLRPSLQTYT 765
Query: 341 IVMHA---------LGKAKQI--------------------------NEALKVYEKMKSD 365
+++ +G Q+ N A + M S+
Sbjct: 766 LLLSCCTDGRSKLDMGFCGQLMASTGHPAHMFLLKMPAAGPDGENVRNHANNFLDLMHSE 825
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
D +++ L K+G+ ++A ++E ++ V P+ L
Sbjct: 826 DRESKRGLVDAVVDFLHKSGQKEEAGSVWEVAAQKNVFPDAL 867
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/387 (25%), Positives = 200/387 (51%), Gaps = 15/387 (3%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVE 218
T YN+++ L K+++ ++L++EM + +G + + T +T++ + + DDA+
Sbjct: 114 TAVTYNSLISGLCKAERASEAYDLLEEM--VYSGCIPDIFTYTTLITGFCKSKKSDDALR 171
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHG 275
F + G D S L+D L K ++ A +F ++ C+P ++ +N LI G
Sbjct: 172 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP-NTVTYNSLISG 230
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+C+ K+D+A ++ M + G SPDVV+YT + +C+ D L +M KG P
Sbjct: 231 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+T+T +M L + ++++A+ + +M+ C P Y++++ +A ++++A +
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM- 349
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+++ PNV+++N MI C + A++L+++ C PD Y ++ CR+K
Sbjct: 350 -LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREK 408
Query: 456 RMKVLNFLLTHMFKNDVSM-DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ + M + + ++ TY++LV GL +G L+ A + E KG VP TY
Sbjct: 409 KVDEACRVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIE----KGCVPNIGTY 464
Query: 515 KMLEEKLEK-KRLGNAKERINKLLAHA 540
+L + K R +A+E ++ ++
Sbjct: 465 NLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 144/270 (53%), Gaps = 3/270 (1%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ LI G CK ++++ A + +M +GF PDV +YT I C E + L+EM
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+ P+V+TYT+++ L K +++EA+ + KM+ C+P Y+SLI L KA R
Sbjct: 74 NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERAS 132
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A ++ E+M G +P++ TY T+I+ C + ++AL++ +++ +PD TY+ L+
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSM-DAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
C++ R+K L M K+ M + TY SL+ G GK++ A + E M G
Sbjct: 193 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 252
Query: 508 VPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
P TY L K RL +A + +N++
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 165/328 (50%), Gaps = 11/328 (3%)
Query: 180 MWELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
+ E K ++E+ N ++ + T + ++ L +GGR D+AV M+K V +
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNS 120
Query: 238 LMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
L+ L K AY + E + CIP + LI G+CK++K DDA + +++ +
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIP-DIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINE 354
GF PDVV+Y+C I+ C+E ++ D M + G C P+ +TY ++ + +++E
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A+ + E+M PD Y++L+ K R+ DA ++ M ++G+ P+V+T+ +++
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-KVLNFLLTHMFKNDVS 473
C + +A+ +L +M C P TY +L CR ++ + F+L M D
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCP 356
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEE 501
+ ++ ++RGL + + A EE
Sbjct: 357 PNVVSFNIMIRGLCKVNRSSEAMELVEE 384
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 159/310 (51%), Gaps = 10/310 (3%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++ L R +A + M + + +VL+D L KG V+ A + +
Sbjct: 48 TYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM 107
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K C+P ++ +N LI G CK + +A ++EM G PD+ +YT I +C+ K
Sbjct: 108 RKKCVP-TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSK-- 164
Query: 318 RKVDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM-KSDDCLPDTSF 373
K DD L+ ++ +G +P V+TY+ ++ L K ++ EA+ ++ +M KS C+P+T
Sbjct: 165 -KSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVT 223
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+SLI + G++ +A + E M + G P+V+TY T+++ C + ++A LL +M
Sbjct: 224 YNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMT 283
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
PD T+ L+ CR+ R+ +L M + S TY +++ G + +LE
Sbjct: 284 RKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE 343
Query: 494 LACSF-FEEM 502
A F EEM
Sbjct: 344 EARKFMLEEM 353
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 122/244 (50%), Gaps = 12/244 (4%)
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
S D V+YT I+ C+ K + L +M KG P V TYT V+HAL +++EA K
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
E+M + + P+ Y+ LI L K GRV +A + M+K+ VP +TYN++IS C
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLC 126
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR----MKVLNFLLTHMFKNDVS 473
A LL++M C PD TY L+ C+ K+ ++V L+ F+ DV
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKG-IVPYHSTYKMLEEKLEKKRLGNAKER 532
TY+ L+ GL + G+L+ A F MI G +P TY L R+G E
Sbjct: 187 ----TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF--CRMGKMDEA 240
Query: 533 INKL 536
+N L
Sbjct: 241 MNLL 244
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 3/203 (1%)
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C +TYT ++ L K K++ +AL KM S PD Y+++I L R+ +A
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ E+M + + PNV+TY +I C + A+ LL KM + C P TY L+
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGL 125
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C+ +R LL M + D TY +L+ G +S K + A FE+++++G P
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185
Query: 512 STYKMLEEKLEKKRLGNAKERIN 534
TY L + L K+ G KE I+
Sbjct: 186 VTYSCLIDGLCKE--GRLKEAID 206
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
+ ++ C D Y+SLI L K R++ A M +G P+V TY +I + C +
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
A K L++M P+ TY L+ C+ R+ LL+ M K V A TY S
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNS 120
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L+ GL ++ + A EEM+ G +P TY L
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTL 156
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELN-NGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N M+ L K + ELV+E N V + T T++ L R + D+A +R
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYT--TVIDGLCREKKVDEACRVYRK 419
Query: 223 M-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRK 281
M ++ G ++ S L+ L ++ A + ++E K C+P + +N+LI + K +
Sbjct: 420 MLEEPGCLPNSITYSTLVTGLCNAGMLDRA-RGYIE-KGCVP-NIGTYNLLIDAFRKANR 476
Query: 282 VDDAQKAMKEMFQQGFS 298
+DA++ + +M Q+GF
Sbjct: 477 DEDARELLDDMVQRGFG 493
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 97/342 (28%), Positives = 169/342 (49%), Gaps = 3/342 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ + +TI+ G + A M+ G+E D+ L+ + K +E A +F
Sbjct: 207 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 266
Query: 256 LEFKDC--IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ + +P ++ +N LI G+C ++ A EM ++G P V +Y +
Sbjct: 267 DKMVEIGLVP-NAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFM 325
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E + DD +KEM++KG P ITY I+++ + A ++ +M S P
Sbjct: 326 EGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVT 385
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+SLI++LS+ R+K+A+++FE + QGV P+V+ +N MI CA E A LL++M+
Sbjct: 386 YTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMD 445
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
PD T+ L++ CR+ +++ LL M + D +Y +L+ G G ++
Sbjct: 446 RKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIK 505
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
A +EM+S G P TY L + L K + G+ E + K
Sbjct: 506 DAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLK 547
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 149/324 (45%), Gaps = 36/324 (11%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +++ + + GR ++A F M + G+ + + L+D +E A+ E
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K I S +N+L+H ++ +A +KEM ++G PD ++Y I Y R +
Sbjct: 305 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 364
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
++ D EM KG +P+ +TYT +++ L + ++ EA ++EK+ PD ++++
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424
Query: 378 I------------FILSKA-----------------------GRVKDANEIFEDMKKQGV 402
I F+L K G+V++A + ++MK +G+
Sbjct: 425 IDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGI 484
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+ ++YNT+IS R + ++A + +M P TY L+K C+ + +
Sbjct: 485 KPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE 544
Query: 463 LLTHMFKNDVSMDAGTYASLVRGL 486
LL M +S D TY SL+ G+
Sbjct: 545 LLKEMVNKGISPDDSTYLSLIEGM 568
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 122/250 (48%), Gaps = 2/250 (0%)
Query: 290 KEMFQQ-GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+E+F + S D +S I E +K + + M+ G KP+V++Y ++H
Sbjct: 161 RELFDELTLSRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSS 220
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
I A ++ + M+ PD+ Y SLI + K GR+++A+ +F+ M + G+VPN +T
Sbjct: 221 RGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVT 280
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YNT+I C + + E A +M + P TY L+ + RM + ++ M
Sbjct: 281 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 340
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLG 527
K + DA TY L+ G G + A EM+SKGI P H TY L L ++ R+
Sbjct: 341 KKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 400
Query: 528 NAKERINKLL 537
A + K+L
Sbjct: 401 EADDLFEKIL 410
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/251 (25%), Positives = 115/251 (45%), Gaps = 5/251 (1%)
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
+D + + S I L+ G K+ A++ + M GF P+VVSY I Y +
Sbjct: 171 RDRLSVKSSIVFDLLEG-----KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIE 225
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
L M+ KG +P TY ++ + K ++ EA +++KM +P+ Y++LI
Sbjct: 226 GARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLI 285
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
G ++ A ++M K+G++P+V TYN ++ + A ++++M +
Sbjct: 286 DGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGII 345
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PD TY L+ R K L M + TY SL+ L +++ A
Sbjct: 346 PDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDL 405
Query: 499 FEEMISKGIVP 509
FE+++ +G+ P
Sbjct: 406 FEKILDQGVSP 416
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 90/228 (39%), Gaps = 39/228 (17%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN +++ + ++L EM L+ G + T ++++ L R R +A + F
Sbjct: 351 YNILINGYSRCGNAKRAFDLHNEM--LSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEK 408
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
+ GV D + ++D +VE A+ + E + +P FN L+ G C+ K
Sbjct: 409 ILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGK 468
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV--------------------- 320
V++A+ + EM +G PD +SY I Y R D +
Sbjct: 469 VEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNA 528
Query: 321 --------------DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
++ LKEM KG P TY ++ +G + E
Sbjct: 529 LIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVE 576
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 187/373 (50%), Gaps = 2/373 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N M++VL K K E + M+ L ++ T +TI+ GR + A F M
Sbjct: 194 FNIMINVLCKEGKLKKAKEFIGLMEALGI-KPNVVTYNTIIHGYCSRGRVEGARMIFDLM 252
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKV 282
K GV+ D+ + + K +E A + + K+ + ++ +N LI G+C +
Sbjct: 253 KCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNL 312
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ A +M ++G P V +Y I + + D +KEM EKG P +TY I+
Sbjct: 313 EMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNIL 372
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ + + +A ++++M S P Y+SLI++LSK GR+K A+++FE + ++G+
Sbjct: 373 INGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGI 432
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+++ +N +I CA + A +L++M++ PD T+ L++ CR+ +++
Sbjct: 433 FPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARE 492
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L+ M + D +Y +L+ G + G ++ A +EM+S G P TY L + L
Sbjct: 493 LIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLC 552
Query: 523 KKRLGNAKERINK 535
K G+ E++ K
Sbjct: 553 KNEEGDHAEQLLK 565
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 141/299 (47%), Gaps = 1/299 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFN 270
R DDA E F MK GV A + ++ +K N E A+ ++ E F+ I S FN
Sbjct: 136 RGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFN 195
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
I+I+ CK K+ A++ + M G P+VV+Y I YC M+ +
Sbjct: 196 IMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCR 255
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G KP TY + + K ++ EA + EKMK P Y++LI G ++ A
Sbjct: 256 GVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMA 315
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ + M ++G++P V TYN +I + + + A ++++M E PD TY L+
Sbjct: 316 FDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILING 375
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
CR +K L M + TY SL+ L + G+++ A FE+++ KGI P
Sbjct: 376 YCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFP 434
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 113/228 (49%), Gaps = 1/228 (0%)
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K +P S +NILI+G+C+ V A EM +G P V+YT I + +
Sbjct: 360 KGLVP-DSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMK 418
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ DD +++ KG P +I + ++ ++ A + ++M +PD +++L+
Sbjct: 419 QADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLM 478
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ G+V+ A E+ E+MK +G+ P+ ++YNT+IS R + ++A ++ +M
Sbjct: 479 QGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFN 538
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
P TY L++ C+ + LL M ++ + TY SL+ G+
Sbjct: 539 PTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 119/250 (47%)
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
++++LI C+ ++ DDA + M +G P V + + + + K EM
Sbjct: 123 LYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEM 182
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
K SV+T+ I+++ L K ++ +A + M++ P+ Y+++I GRV
Sbjct: 183 FRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRV 242
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+ A IF+ MK +GV P+ TY + IS C + E A +L+KM+E +P TY L
Sbjct: 243 EGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTL 302
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C K +++ M + + TY L+ L K++ A +EM KG+
Sbjct: 303 IDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGL 362
Query: 508 VPYHSTYKML 517
VP TY +L
Sbjct: 363 VPDSVTYNIL 372
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 89/181 (49%)
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+ Y +++ A + K+ ++A + ++ MK +P + ++ + K+ R + A ++ +
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M + + +V+T+N MI+ C + + A + + ME KP+ TY ++ C + R
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ + M V D+ TY S + G+ + GKLE A E+M G+ P TY
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301
Query: 517 L 517
L
Sbjct: 302 L 302
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 1/141 (0%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIF 269
G D A + M + V D + LM + VE A ++ E K I +
Sbjct: 450 GNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISY 509
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N LI G+ K + DA + EM GF+P +++Y I+ C+ ++ + LKEM
Sbjct: 510 NTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMIS 569
Query: 330 KGCKPSVITYTIVMHALGKAK 350
KG P+ TY ++ +G +
Sbjct: 570 KGITPNDNTYLSLIEGIGNVE 590
>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 157 bits (396), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 212/495 (42%), Gaps = 59/495 (11%)
Query: 87 RVLSE--NHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSL--VEQTLRRFSNDLT 142
RV+ E E ++D + IL + E L C ++ + EQ L+ F
Sbjct: 78 RVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF----- 132
Query: 143 PAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMS 201
+ + G T +YN ++D L KF ++ L M + +G + ++ T +
Sbjct: 133 -------YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK--DGLIPNVFTYN 183
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
+++ L + R D A + F M G D + ++ +L K ++ A ++ FK
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPS 243
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD----- 316
+P ++N LI G CK +++ A K + EM G P+VVSY+C I C +
Sbjct: 244 VP----VYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299
Query: 317 -------FRKVD-----------------------DTLKEMQEKGCKPSVITYTIVMHAL 346
R D D K M + GC+P+V+ Y ++H L
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
+ EAL+V ++M+ CLP+ + YS LI +K+G + A+E + M G PNV
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNV 419
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+TY M+ C S + A L++KM + C P+ T+ +K C R++ LL
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLER 479
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-R 525
M + + TY L+ L K E A F+E+ ++ + P TY + +
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539
Query: 526 LGNAKERINKLLAHA 540
+G A + K L
Sbjct: 540 MGEALQLFGKALVRG 554
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 162/356 (45%), Gaps = 9/356 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y TMV L K+ K + + EL + S+ + ++ + + GR + A++
Sbjct: 217 YTTMVSSLCKAGK-------IDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGE 269
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M GV+ + + S ++++L +VE A+ +F + F + F LI G K
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK 329
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A K M Q G P+VV+Y I C + +MQ GC P+V TY+I
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ K+ + A + + +M S C P+ Y+ ++ +L K AN + E M +G
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PN +T+NT I C E A+KLL++M+ C P+ TY LL R + +
Sbjct: 450 CTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + ++ + TY +++ G +G + A F + + +G P TY +
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTM 565
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 88/357 (24%), Positives = 182/357 (50%), Gaps = 5/357 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ +++ L S L + L +M L ++ T + +++ G+ +A++ ++ M
Sbjct: 282 YSCIINSLCVSGNVELAFALFAQM-FLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLM 340
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ G E + A + L+ L S+E A +V ++ C+P + ++ILI G+ K+
Sbjct: 341 IQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP-NVTTYSILIDGFAKSGD 399
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ A + M G P+VV+YTC ++ C+ F + + +++M +GC P+ +T+
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNT 459
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+ L ++ A+K+ E+M+ CLP+ + Y+ L+ L + + ++A +F++++ +
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PN++TYNT++ AL+L K PD TY ++ C++ ++K+
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAA 579
Query: 462 FLLTHMFK-NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L+ + + D TY SL+ G +E A +F ++ I++GI P +T+ L
Sbjct: 580 QLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNAL 636
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 182/413 (44%), Gaps = 47/413 (11%)
Query: 133 TLRRFSND--LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM--D 188
L+R D L+ GFF+ + HT Y M++ LG+ + ++ ++++M D
Sbjct: 44 VLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMD 103
Query: 189 ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
+N I+ R G + A++ F + ++G + R + L+D L+ N
Sbjct: 104 GIN---CCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSEN-- 158
Query: 249 EHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
+F+ PL + M + G P+V +Y +
Sbjct: 159 --------KFQMINPLYTN------------------------MKKDGLIPNVFTYNILL 186
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+ C+ EM KGC P +TYT ++ +L KA +I++A ++ + K
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK----- 241
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P Y++LI + K GR++ A ++ +M GV PNV++Y+ +I+S C E A L
Sbjct: 242 PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFAL 301
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+M C + T+ PL+K C + ++ L M ++ + Y +L+ GL
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 361
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR-LGNAKERINKLLAHA 540
+G LE A ++M G +P +TY +L + K L A E N++++H
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 127/260 (48%), Gaps = 10/260 (3%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T S ++ + G A E + M +G + + ++D L K + + A +
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ + C P ++ FN I G C +V+ A K ++ M G P++ +Y ++ R
Sbjct: 443 EKMTLEGCTP-NTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFR 501
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + +E++ + +P+++TY V++ +A + EAL+++ K PD+
Sbjct: 502 MNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSIT 561
Query: 374 YSSLIFILSKAGRVKDANEIFE---DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y+++I K G+VK A ++ E MK+ P+++TY ++I AC E A+ L
Sbjct: 562 YNTMIHAYCKQGKVKIAAQLVERVSSMKEWH--PDIITYTSLIWGACNWMNIEEAMAFLD 619
Query: 431 K-MEEDLCKPDCETYAPLLK 449
K + + +C P+ T+ L++
Sbjct: 620 KAINQGIC-PNFATWNALVR 638
>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 901
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 104/367 (28%), Positives = 178/367 (48%), Gaps = 10/367 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM---DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
+ +++D LGK + + L ++M D++ N V +++++ + GR +D + F
Sbjct: 480 FCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVV----YTSLIKSFFKCGRKEDGHKIF 535
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCK 278
+ M G D R L+ MD + K +F E K IP ++ILIHG K
Sbjct: 536 KEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIP-DVMSYSILIHGLVK 594
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ + M +QG D +Y FI+ +C+ K L+EM+ KG +P+V+T
Sbjct: 595 AGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVT 654
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y V+ L K +++EA ++E+ KS+ + YSSLI K GR+ +A I E++
Sbjct: 655 YGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELM 714
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++G+ PNV T+N ++ + E AL Q M+ P+ TY+ L+ CR ++
Sbjct: 715 QKGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFN 774
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
M K + + TY +++ GL ++G + A S FE + G VP ++Y +
Sbjct: 775 KAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAII 834
Query: 519 EKLEKKR 525
E L R
Sbjct: 835 EGLSYSR 841
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 119/480 (24%), Positives = 207/480 (43%), Gaps = 47/480 (9%)
Query: 82 SRISSRVLSENHET---------DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQ 132
+++S + ++NHE VD + KIL PD V AL S LV
Sbjct: 42 GQVTSFMDADNHENWTKSGTAKEVVDDVCKILESGNWGPD-VENALSLFVESPKTDLVIG 100
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM----- 187
LRR + D+ A +F W + +T PE Y++++ V+ K+ KF +++ EM
Sbjct: 101 VLRR-AKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSIAGF 159
Query: 188 -----------------DELNNGYVSLATM------------STIMRRLVRGGRYDDAVE 218
++L G+ + M +T++ L D +
Sbjct: 160 GPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLT 219
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWC 277
F M++ G E + ++ + ++ A + E K +C+ ++N+ I +
Sbjct: 220 LFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFG 279
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K KVD A K E+ G PD V+YT I C+ + + ++M++ P
Sbjct: 280 KAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAY 339
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y ++ G A + +EA + E+ K+ C+P Y+ ++ L K GR+ +A FE+M
Sbjct: 340 AYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEM 399
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
KK PN+ TYN +I C E E A K+ M+E P+ T ++ C+ K++
Sbjct: 400 KKDAA-PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKL 458
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ M S D T+ SL+ GL + G+++ A +E+M+ +P Y L
Sbjct: 459 DEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSL 518
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 171/380 (45%), Gaps = 2/380 (0%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
A+ FF K+ G + Y +M+ VL K + E+ ++M++ N + A + I
Sbjct: 287 AWKFFHEIKSH-GLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMI 345
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
M G++D+A K G A + ++ L K + A + F E K
Sbjct: 346 MG-YGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDAA 404
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ +N+LI CK +V+ A K M + G P+V++ I+ C+ K +
Sbjct: 405 PNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSI 464
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+ M K C P +T+ ++ LGK ++++A ++YE+M D +P+ Y+SLI K
Sbjct: 465 FEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFK 524
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
GR +D ++IF++M +G P++ N + E L ++++ PD +
Sbjct: 525 CGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMS 584
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y+ L+ + + L M + +D Y + + G +SGK+ A EEM
Sbjct: 585 YSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMK 644
Query: 504 SKGIVPYHSTYKMLEEKLEK 523
+KG P TY + + L K
Sbjct: 645 TKGRQPTVVTYGSVIDGLAK 664
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/296 (21%), Positives = 129/296 (43%), Gaps = 3/296 (1%)
Query: 237 VLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQ 294
+++ L + V A F E K L + ++ L+ K K D ++ + EM
Sbjct: 97 LVIGVLRRAKDVNQAISYFRWTERKTDQALCPEAYDSLLLVMAKNVKFDYFEQILGEMSI 156
Query: 295 QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
GF P + I + R+ D ++ M++ +P+ YT ++ AL ++ +
Sbjct: 157 AGFGPSTKTCIELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDI 216
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
L ++ +M+ ++++I + ++ GR+ A + ++MK + +++ YN I
Sbjct: 217 MLTLFHQMQELGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCID 276
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
+ + A K +++ PD TY ++ + C+ R+ + M +N
Sbjct: 277 CFGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVP 336
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNA 529
A Y +++ G +GK + A S E ++G +P Y + L KK RLG A
Sbjct: 337 CAYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEA 392
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 99/257 (38%), Gaps = 38/257 (14%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
S + A+ KT+ G T Y +++D L K + + L +E N +++
Sbjct: 630 SGKVNKAYQLLEEMKTK-GRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS-NGLELNV 687
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
S+++ + GR D+A + + G+ + + L+D LVK + A F
Sbjct: 688 VIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALVCFQN 747
Query: 258 FKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV-------------- 302
K+ + I ++ILI+G C+ RK + A +EM +QG P+ +
Sbjct: 748 MKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIAGLAKAGN 807
Query: 303 ---------------------SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
SY IE + + +E + KGC T
Sbjct: 808 IAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNIHTKTCIA 867
Query: 342 VMHALGKAKQINEALKV 358
++ AL K + + +A V
Sbjct: 868 LLDALQKDECLEQAAIV 884
>gi|356549285|ref|XP_003543024.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Glycine max]
Length = 479
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 187/396 (47%), Gaps = 41/396 (10%)
Query: 125 VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ--TGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
++NSLV Q ++ D+ A F A + G+ H E + ++ L +F
Sbjct: 13 ITNSLVVQLIKA-EKDVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPAEG 71
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
+++ M + V+ +I R R R DA+ F M+ + + +A ++D L
Sbjct: 72 MLERMKQ-EKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDIL 130
Query: 243 VKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK-VDDAQKAMKEMFQQGFSPD 300
V+ N V+ A + E ++ IP S NILI CK ++ VD A + +EM +G PD
Sbjct: 131 VEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQPD 190
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+Y I CR + + + KEM++KG SV+TYT ++H L ++ ++EA+ + E
Sbjct: 191 SYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLLE 250
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+MK +D P+ YSSL+ L K G A ++ E M K+ +PN++TY+T+I+ C
Sbjct: 251 EMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKER 310
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+ A+++L +M KP +AG Y
Sbjct: 311 KLREAVEILDRMRIQGLKP-----------------------------------NAGLYG 335
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ GL +G + A +F +EM+ GI P +++ +
Sbjct: 336 KIISGLCAAGSYQEAANFIDEMVLGGISPNRASWSL 371
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/396 (20%), Positives = 174/396 (43%), Gaps = 49/396 (12%)
Query: 92 NHETDVDKISKILS-KQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTW 150
+HET IS++++ Q++ + ++E +K V+ + R + P +
Sbjct: 49 DHETFGLIISRLVTVNQFRPAEGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVF 108
Query: 151 AKTQTGYMHTP--EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLV 208
K + G+ P + Y T++D+L + +EM EL S+ +++ +++ L
Sbjct: 109 HKME-GFQLRPTQKAYLTILDILVEENHVKRAIGFYREMRELGIPS-SVVSLNILIKALC 166
Query: 209 RGGR-YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSS 266
+ D A+ F+ M G + D+ L++ L + ++ A ++F E + S
Sbjct: 167 KNKETVDSALRIFQEMPNRGCQPDSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASV 226
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+ LIHG C++ +D+A ++EM + P+V +Y+ ++ C+ + L+
Sbjct: 227 VTYTSLIHGLCQSNNLDEAIGLLEEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEV 286
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M +K P+++TY+ +++ L K +++ EA+++ ++M+ P+ Y +I L AG
Sbjct: 287 MDKKHHLPNMVTYSTLINGLCKERKLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGS 346
Query: 387 VKDANEIFEDMKKQGVVPN----------------------------------------- 405
++A ++M G+ PN
Sbjct: 347 YQEAANFIDEMVLGGISPNRASWSLHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISV 406
Query: 406 -VLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ T++ ++ C R + A ++L++M D C PD
Sbjct: 407 EIDTFDCLVKCFCKRGDLHKAARILEEMVLDGCIPD 442
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 122/276 (44%), Gaps = 13/276 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y T+++ L + EL KEM++ G+ S+ T ++++ L + D+A+
Sbjct: 194 YGTLINGLCRLGNISEAKELFKEMEQ--KGFSASVVTYTSLIHGLCQSNNLDEAIGLLEE 251
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
MK+ +E + S LMD L KG A ++ ++ K +P + ++ LI+G CK R
Sbjct: 252 MKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLP-NMVTYSTLINGLCKER 310
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS----- 335
K+ +A + + M QG P+ Y I C +++ + + EM G P+
Sbjct: 311 KLREAVEILDRMRIQGLKPNAGLYGKIISGLCAAGSYQEAANFIDEMVLGGISPNRASWS 370
Query: 336 --VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
V + +V+ L A ++Y M++ + + L+ K G + A I
Sbjct: 371 LHVRMHNMVVQGLCNNVDPPRAFQLYLSMRTRCISVEIDTFDCLVKCFCKRGDLHKAARI 430
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
E+M G +P+ +N +I R + A + L
Sbjct: 431 LEEMVLDGCIPDEGVWNVVIGGLWDRKKVREATEQL 466
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 116/301 (38%), Gaps = 44/301 (14%)
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEM------FQQGFSPDVVSYTCFIEHYCREKDFRKV 320
QI N L+ K K D KA+ + GF D ++ I FR
Sbjct: 12 QITNSLVVQLIKAEK--DVHKAVNMFDSATAEYGNGFRHDHETFGLIISRLVTVNQFRPA 69
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+ L+ M+++ C + + + G+ + +A++V+ KM+ P Y +++ I
Sbjct: 70 EGMLERMKQEKCMVTEDIFLSICRGYGRVHRPLDAIRVFHKMEGFQLRPTQKAYLTILDI 129
Query: 381 LSKAGRVK------------------------------------DANEIFEDMKKQGVVP 404
L + VK A IF++M +G P
Sbjct: 130 LVEENHVKRAIGFYREMRELGIPSSVVSLNILIKALCKNKETVDSALRIFQEMPNRGCQP 189
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+ TY T+I+ C A +L ++ME+ TY L+ C+ + LL
Sbjct: 190 DSYTYGTLINGLCRLGNISEAKELFKEMEQKGFSASVVTYTSLIHGLCQSNNLDEAIGLL 249
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M +ND+ + TY+SL+ GL + G A E M K +P TY L L K+
Sbjct: 250 EEMKRNDIEPNVFTYSSLMDGLCKGGHSSQAMQLLEVMDKKHHLPNMVTYSTLINGLCKE 309
Query: 525 R 525
R
Sbjct: 310 R 310
>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Cucumis sativus]
Length = 660
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 126/495 (25%), Positives = 212/495 (42%), Gaps = 59/495 (11%)
Query: 87 RVLSE--NHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSL--VEQTLRRFSNDLT 142
RV+ E E ++D + IL + E L C ++ + EQ L+ F
Sbjct: 78 RVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMF----- 132
Query: 143 PAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMS 201
+ + G T +YN ++D L KF ++ L M + +G + ++ T +
Sbjct: 133 -------YRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKK--DGLIPNVFTYN 183
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
+++ L + R D A + F M G D + ++ +L K ++ A ++ FK
Sbjct: 184 ILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFKPS 243
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD----- 316
+P ++N LI G CK +++ A K + EM G P+VVSY+C I C +
Sbjct: 244 VP----VYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299
Query: 317 -------FRKVD-----------------------DTLKEMQEKGCKPSVITYTIVMHAL 346
R D D K M + GC+P+V+ Y ++H L
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
+ EAL+V ++M+ CLP+ + YS LI +K+G + A+E + M G PNV
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNV 419
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+TY M+ C S + A L++KM + C P+ T+ +K C R++ LL
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLER 479
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-R 525
M + + TY L+ L K E A F+E+ ++ + P TY + +
Sbjct: 480 MQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGM 539
Query: 526 LGNAKERINKLLAHA 540
+G A + K L
Sbjct: 540 MGEALQLFGKALVRG 554
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 162/356 (45%), Gaps = 9/356 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y TMV L K+ K + + EL + S+ + ++ + + GR + A++
Sbjct: 217 YTTMVSSLCKAGK-------IDDARELAGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGE 269
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M GV+ + + S ++++L +VE A+ +F + F + F LI G K
Sbjct: 270 MMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGK 329
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A K M Q G P+VV+Y I C + +MQ GC P+V TY+I
Sbjct: 330 LYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSI 389
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ K+ + A + + +M S C P+ Y+ ++ +L K AN + E M +G
Sbjct: 390 LIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEG 449
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PN +T+NT I C E A+KLL++M+ C P+ TY LL R + +
Sbjct: 450 CTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAF 509
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + ++ + TY +++ G +G + A F + + +G P TY +
Sbjct: 510 GLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTM 565
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 182/357 (50%), Gaps = 5/357 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ +++ L S L + L +M L ++ T + +++ G+ +A++ ++ M
Sbjct: 282 YSCIINSLCVSGNVELAFALFAQM-FLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLM 340
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ G E + A + L+ L S+E A +V ++ C+P + ++ILI G+ K+
Sbjct: 341 IQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP-NVTTYSILIDGFAKSGD 399
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ A + M G P+VV+YTC ++ C+ F + + +++M +GC P+ IT+
Sbjct: 400 LVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNT 459
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+ L ++ A+K+ E+M+ CLP+ + Y+ L+ L + + ++A +F++++ +
Sbjct: 460 FIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARN 519
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PN++TYNT++ AL+L K PD TY ++ C++ ++K+
Sbjct: 520 LQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAA 579
Query: 462 FLLTHMFK-NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L+ + + D TY SL+ G +E A +F ++ I++GI P +T+ L
Sbjct: 580 QLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGICPNFATWNAL 636
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 101/413 (24%), Positives = 182/413 (44%), Gaps = 47/413 (11%)
Query: 133 TLRRFSND--LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM--D 188
L+R D L+ GFF+ + HT Y M++ LG+ + ++ ++++M D
Sbjct: 44 VLKRLKTDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMD 103
Query: 189 ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
+N I+ R G + A++ F + ++G + R + L+D L+ N
Sbjct: 104 GIN---CCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSEN-- 158
Query: 249 EHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
+F+ PL + M + G P+V +Y +
Sbjct: 159 --------KFQMINPLYTN------------------------MKKDGLIPNVFTYNILL 186
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+ C+ EM KGC P +TYT ++ +L KA +I++A ++ + K
Sbjct: 187 KALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK----- 241
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P Y++LI + K GR++ A ++ +M GV PNV++Y+ +I+S C E A L
Sbjct: 242 PSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFAL 301
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+M C + T+ PL+K C + ++ L M ++ + Y +L+ GL
Sbjct: 302 FAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCS 361
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR-LGNAKERINKLLAHA 540
+G LE A ++M G +P +TY +L + K L A E N++++H
Sbjct: 362 NGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHG 414
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 127/260 (48%), Gaps = 10/260 (3%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T S ++ + G A E + M +G + + ++D L K + + A +
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ + C P ++ FN I G C +V+ A K ++ M G P++ +Y ++ R
Sbjct: 443 EKMTLEGCTP-NTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFR 501
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + +E++ + +P+++TY V++ +A + EAL+++ K PD+
Sbjct: 502 MNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSIT 561
Query: 374 YSSLIFILSKAGRVKDANEIFE---DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y+++I K G+VK A ++ E MK+ P+++TY ++I AC E A+ L
Sbjct: 562 YNTMIHAYCKQGKVKIAAQLVERVSSMKEWH--PDIITYTSLIWGACNWMNIEEAMAFLD 619
Query: 431 K-MEEDLCKPDCETYAPLLK 449
K + + +C P+ T+ L++
Sbjct: 620 KAINQGIC-PNFATWNALVR 638
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 174/339 (51%), Gaps = 1/339 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T +T++ R G D A M++ GV + +++ L K +E A K+F
Sbjct: 189 NVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMF 248
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E ++ + +N L+ G+CK + +A EM Q+G PDVV++T I CR
Sbjct: 249 DEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRA 308
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + + +M+E+G + + T+T ++ + +++AL ++M+ P Y
Sbjct: 309 GNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCY 368
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ LI K GR+ +A E+ +M+ +G+ P+V+TY+T++S C + ++A +L +KM +
Sbjct: 369 NVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLK 428
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD TY+ L++ C ++R+ L M + + D TY +L+ G + G ++
Sbjct: 429 KGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQK 488
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
A S +EMI KG++P TY +L + L K +R+
Sbjct: 489 ALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRL 527
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 187/393 (47%), Gaps = 22/393 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT+V G K CL L + G V + T ++++ + R G + AV
Sbjct: 263 YNTLVS--GYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQ 320
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
M++ G+ + + L+D + ++ A E ++C I S +N+LI+G+CK +
Sbjct: 321 MRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGR 380
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A++ + EM +G PDVV+Y+ + YC+ D + ++M +KG P ITY+
Sbjct: 381 MDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSS 440
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L + +++ +A +++EKM PD Y++LI K G V+ A + ++M K+G
Sbjct: 441 LIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKG 500
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V+P+V+TY+ +I + + A +LL K+ + PD Y L+ CCR K +
Sbjct: 501 VLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH-CCRTAEFKSVV 559
Query: 462 FLL----------------THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
LL M +D Y+ L+ G G + A SF ++++
Sbjct: 560 ALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRC 619
Query: 506 GIVPYH-STYKMLEEKLEKKRLGNAKERINKLL 537
G P ST ++ E+ A I +LL
Sbjct: 620 GFSPNSTSTISLVRGLFEEGMTVEADNVIQELL 652
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 156/358 (43%), Gaps = 41/358 (11%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFR 221
YNT+V ++ + LV M E G V SL T +T++ L + GR +DA + F
Sbjct: 193 YNTLVAAFCRAGEVDAAERLVGVMRE---GGVRPSLVTFNTVVNGLCKAGRMEDARKMFD 249
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSSQI------- 268
M + G+ D + + L+ K + A VF E D + +S I
Sbjct: 250 EMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAG 309
Query: 269 -----------------------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
F LI G+C+ +DDA AMKEM + P VV Y
Sbjct: 310 NLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYN 369
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I YC+ + + + EM+ KG KP V+TY+ ++ K + A ++ KM
Sbjct: 370 VLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKK 429
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
+PD YSSLI L + R+ DA E+FE M + G+ P+ TY T+I C + A
Sbjct: 430 GVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKA 489
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
L L +M + PD TY+ L+ + R K LL ++ D D Y +L+
Sbjct: 490 LSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 133/259 (51%), Gaps = 8/259 (3%)
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYC----REKDFRKVDDTLKEMQEKGCKPSVITYT 340
A++ + M + G +P+V +Y + C RE+ V D +M+ GC P+V+TY
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGD---DMRGAGCAPNVVTYN 194
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ A +A +++ A ++ M+ P +++++ L KAGR++DA ++F++M ++
Sbjct: 195 TLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMARE 254
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+ ++YNT++S C AL + +M + PD T+ L+ CR ++
Sbjct: 255 GLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERA 314
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L+ M + + M+ T+ +L+ G +G L+ A +EM I P Y +L
Sbjct: 315 VALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLING 374
Query: 521 LEK-KRLGNAKERINKLLA 538
K R+ A+E I+++ A
Sbjct: 375 YCKLGRMDEARELIHEMEA 393
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 117/292 (40%), Gaps = 53/292 (18%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQI 268
GR D+A E M+ G++ D S ++ K + A+++ + K +P +
Sbjct: 379 GRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVP-DAIT 437
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
++ LI G C+ R++ DA + ++M Q G PD +YT I+ +C+E + +K EM
Sbjct: 438 YSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMI 497
Query: 329 EKGCKPSVITYTIVMHALGKAKQ------------------------------------- 351
+KG P V+TY++++ L K+ +
Sbjct: 498 KKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCCRTAEFKS 557
Query: 352 -------------INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+N+A KVY+ M D S YS LI + G + A + +
Sbjct: 558 VVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLL 617
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ G PN + +++ A ++Q++ D ET L+ +
Sbjct: 618 RCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLNCCSLADAETSKALIDL 669
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/364 (29%), Positives = 173/364 (47%), Gaps = 5/364 (1%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
N M+ L K + ++ + KEM G V++ T ++ L + G++ A + MK
Sbjct: 198 NPMLVSLVKEGRIGVVESVYKEMIRRRIG-VNVVTFDVVINGLCKVGKFQKAGDVVEDMK 256
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVD 283
+G + ++D K + A + E I + FNILI G+C+ V
Sbjct: 257 AWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVT 316
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A+K +EM +QG P+VV+Y I C + +M G KP+V+TY ++
Sbjct: 317 AAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALI 376
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ K K + EA ++ + + P+ +++LI KAGR+ DA + M GV
Sbjct: 377 NGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-KVLNF 462
PNV TYN +I C + A KL ++ME + K D TY L+ C+K K +
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496
Query: 463 L--LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L +T M K + TY L++G GKLE A EM+ KG++P +TY +L ++
Sbjct: 497 LDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDE 556
Query: 521 LEKK 524
+ +K
Sbjct: 557 MMEK 560
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 125/483 (25%), Positives = 221/483 (45%), Gaps = 39/483 (8%)
Query: 67 PSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVS 126
PSL + + + S S+ +H D IS++++KQ+ S K + V +
Sbjct: 19 PSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTI-------VKET 71
Query: 127 N--SLVEQTLRRFSNDLTP--AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
N SL++ F+++ P +F W + + G +H E + ++ +L +K + +
Sbjct: 72 NPSSLLQHL---FNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRA 128
Query: 183 LVKEMDELNNGYVSLATM--------------STIMRRLV----RGGRYDDAVEAFRGMK 224
L+ + N + S +T+ S I+ LV + G D A+E F
Sbjct: 129 LLDSFAK--NAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAG 186
Query: 225 KYGVEKDTRALSVLMDTLVKGNS---VEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRK 281
YG + + ++ +LVK VE YK + + I ++ F+++I+G CK K
Sbjct: 187 DYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR--IGVNVVTFDVVINGLCKVGK 244
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
A +++M GFSP V++Y I+ YC+ K D LKEM K P+ IT+ I
Sbjct: 245 FQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNI 304
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + + + A KV+E+M+ P+ Y+SLI L G++ +A + + M G
Sbjct: 305 LIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMG 364
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PNV+TYN +I+ C + + A ++L + + P+ T+ L+ + RM
Sbjct: 365 LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAF 424
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + M V + TY L+ G G ++ A +EM G+ TY +L + L
Sbjct: 425 LLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDAL 484
Query: 522 EKK 524
KK
Sbjct: 485 CKK 487
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 171/332 (51%), Gaps = 7/332 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
++ +++ L K KF ++V++M G+ S+ T +TI+ + G+ A +
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAW--GFSPSVITYNTIIDGYCKAGKMFKADALLKE 289
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M + + ++L+D + +V A KVF E + + + +N LI+G C K
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A +M G P+VV+Y I +C++K ++ + L ++ ++G P+VIT+
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ A GKA ++++A + M P+ S Y+ LI + G VK+A ++ ++M+ G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKM---EEDLCKPDCETYAPLLKMCCRKKRMK 458
+ +++TYN ++ + C + E A++LL +M E+ + + TY L+K C K +++
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLE 529
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
N LL M + + + TY L ++E G
Sbjct: 530 EANRLLNEMLEKGLIPNRTTYDILRDEMMEKG 561
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 99/209 (47%), Gaps = 26/209 (12%)
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY---KVFLEFKDCIPLSSQIFNI 271
+A E + K G+ + + L+D K ++ A+ + L+ C +S+ +N
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVST--YNC 444
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM---Q 328
LI G+C+ V +A+K KEM G D+V+Y ++ C++ + RK L EM +
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLME 504
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+KG + +++TY +++ ++ EA ++ +M +P+ + Y L
Sbjct: 505 KKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL----------- 553
Query: 389 DANEIFEDMKKQGVVPNV--LTYNTMISS 415
++M ++G +P++ YN ISS
Sbjct: 554 -----RDEMMEKGFIPDIDGHLYNVSISS 577
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 92/316 (29%), Positives = 161/316 (50%), Gaps = 1/316 (0%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDC 261
++ +VR +Y+ V F+ M+ G++ + LS+L++ + V++ + VF + K
Sbjct: 46 LLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKRG 105
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
IF LI G C+ K + A +KEM G PDVV+ + YC + KV
Sbjct: 106 FKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVR 165
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
M KG KP V +Y+I ++ K ++I+EA++++++M +P+ Y++LI L
Sbjct: 166 KIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKAL 225
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+A R +DA +F M G+ P++L Y+T++ C + + L L Q+M+ L KPD
Sbjct: 226 CQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDL 285
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
Y ++ CR +++K +L+ + + D TY +LV GL G + A F +
Sbjct: 286 VVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRK 345
Query: 502 MISKGIVPYHSTYKML 517
M G +P +Y +L
Sbjct: 346 MEEDGCMPGSCSYNVL 361
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 144/313 (46%), Gaps = 3/313 (0%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQI 268
G DDA+ +F M + + L+ ++V+ E +F +EF+ I +
Sbjct: 19 GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRG-IKYNVCT 77
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ILI+ +C VD + ++GF PDVV +T I+ CR LKEM
Sbjct: 78 LSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMG 137
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
GC P V+T +M +I++ K++ M S PD YS I K ++
Sbjct: 138 LVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKID 197
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A E+F++M +GVVPN +TYNT+I + C +A L +KM PD Y+ LL
Sbjct: 198 EAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLL 257
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C++ + + L M + V D Y ++ G+ S K++ A +I +G+
Sbjct: 258 DGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLK 317
Query: 509 PYHSTYKMLEEKL 521
P TY L + L
Sbjct: 318 PDVHTYTALVDGL 330
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/404 (23%), Positives = 179/404 (44%), Gaps = 47/404 (11%)
Query: 86 SRVLSENHETDVDKISKILS-----KQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSND 140
+R+L N + + + +++LS K+Y++ + + ++ G+ + + + F
Sbjct: 29 NRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFL 88
Query: 141 LTPAFGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
+GF + KT + G+ ++ T++D + + K L L+KEM L + T
Sbjct: 89 HHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMG-LVGCVPDVVT 147
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
+++MR G+ D + F M G++ D ++Y +F
Sbjct: 148 CNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDV-----------------YSYSIF---- 186
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
I+G+CK K+D+A + EM +G P+ V+Y I+ C+ R
Sbjct: 187 -------------INGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRD 233
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
++M G P ++ Y+ ++ K ++E L ++++M+ PD Y+ +I
Sbjct: 234 AQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIIN 293
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+ ++ +VKDA E+ + +G+ P+V TY ++ C AL+L +KMEED C P
Sbjct: 294 GMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMP 353
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
+Y LL+ C + + L+ M D G YA V
Sbjct: 354 GSCSYNVLLQGCLQHNDTSTVVQLIHEM------ADRGFYADAV 391
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/163 (19%), Positives = 72/163 (44%), Gaps = 3/163 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-K 259
ST++ + G D+ + F+ M++ V+ D +++++ + + V+ A +V
Sbjct: 254 STLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIV 313
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ + + L+ G C+ + +A + ++M + G P SY ++ + D
Sbjct: 314 EGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTST 373
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHAL--GKAKQINEALKVYE 360
V + EM ++G +T T + L + I + L ++E
Sbjct: 374 VVQLIHEMADRGFYADAVTRTFLKDFLPGNDSPAIKQLLGLFE 416
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 156 bits (395), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 200/387 (51%), Gaps = 15/387 (3%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVE 218
T YN+++ L K+++ ++L++EM + +G + + T +T++ + + DDA+
Sbjct: 114 TAVTYNSLISGLCKAERASEAYDLLEEM--VYSGCIPDIFTYTTLITGFCKSKKSDDALR 171
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHG 275
F + G D S L+D L K ++ A +F ++ C+P ++ +N LI G
Sbjct: 172 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMP-NTVTYNSLISG 230
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+C+ K+D+A ++ M + G SPDVV+YT + +C+ D L +M KG P
Sbjct: 231 FCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPD 290
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+T+T +M L + ++++A+ + +M+ C P Y++++ +A ++++A +
Sbjct: 291 VVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM- 349
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+++ PNV+++N MI C + A++L+++ C PD Y ++ CR+K
Sbjct: 350 -LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREK 408
Query: 456 RMKVLNFLLTHMFKNDVSM-DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ + M + + ++ TY++L+ GL +G L+ A + E KG VP TY
Sbjct: 409 KVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIE----KGCVPNIGTY 464
Query: 515 KMLEEKLEK-KRLGNAKERINKLLAHA 540
+L + K R +A+E ++ ++
Sbjct: 465 NLLIDAFRKANRDEDARELLDDMVQRG 491
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 144/270 (53%), Gaps = 3/270 (1%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ LI G CK ++++ A + +M +GF PDV +YT I C E + L+EM
Sbjct: 14 YTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMA 73
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+ P+V+TYT+++ L K +++EA+ + KM+ C+P Y+SLI L KA R
Sbjct: 74 NRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRK-KCVPTAVTYNSLISGLCKAERAS 132
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A ++ E+M G +P++ TY T+I+ C + ++AL++ +++ +PD TY+ L+
Sbjct: 133 EAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLI 192
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSM-DAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
C++ R+K L M K+ M + TY SL+ G GK++ A + E M G
Sbjct: 193 DGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGS 252
Query: 508 VPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
P TY L K RL +A + +N++
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 165/328 (50%), Gaps = 11/328 (3%)
Query: 180 MWELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
+ E K ++E+ N ++ + T + ++ L +GGR D+AV M+K V +
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAV-TYNS 120
Query: 238 LMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
L+ L K AY + E + CIP + LI G+CK++K DDA + +++ +
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIP-DIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINE 354
GF PDVV+Y+C I+ C+E ++ D M + G C P+ +TY ++ + +++E
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A+ + E+M PD Y++L+ K R+ DA ++ M ++G+ P+V+T+ +++
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-KVLNFLLTHMFKNDVS 473
C + +A+ +L +M C P TY +L CR ++ + F+L M D
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEM---DCP 356
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEE 501
+ ++ ++RGL + + A EE
Sbjct: 357 PNVVSFNIMIRGLCKVNRSSEAMELVEE 384
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 159/310 (51%), Gaps = 10/310 (3%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++ L R +A + M + + +VL+D L KG V+ A + +
Sbjct: 48 TYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM 107
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K C+P ++ +N LI G CK + +A ++EM G PD+ +YT I +C+ K
Sbjct: 108 RKKCVP-TAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSK-- 164
Query: 318 RKVDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM-KSDDCLPDTSF 373
K DD L+ ++ +G +P V+TY+ ++ L K ++ EA+ ++ +M KS C+P+T
Sbjct: 165 -KSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVT 223
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+SLI + G++ +A + E M + G P+V+TY T+++ C + ++A LL +M
Sbjct: 224 YNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMT 283
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
PD T+ L+ CR+ R+ +L M + S TY +++ G + +LE
Sbjct: 284 RKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLE 343
Query: 494 LACSF-FEEM 502
A F EEM
Sbjct: 344 EARKFMLEEM 353
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 122/244 (50%), Gaps = 12/244 (4%)
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
S D V+YT I+ C+ K + L +M KG P V TYT V+HAL +++EA K
Sbjct: 8 SADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARK 67
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
E+M + + P+ Y+ LI L K GRV +A + M+K+ VP +TYN++IS C
Sbjct: 68 FLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLC 126
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR----MKVLNFLLTHMFKNDVS 473
A LL++M C PD TY L+ C+ K+ ++V L+ F+ DV
Sbjct: 127 KAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVV 186
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKG-IVPYHSTYKMLEEKLEKKRLGNAKER 532
TY+ L+ GL + G+L+ A F MI G +P TY L R+G E
Sbjct: 187 ----TYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF--CRMGKMDEA 240
Query: 533 INKL 536
+N L
Sbjct: 241 MNLL 244
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 100/203 (49%), Gaps = 3/203 (1%)
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C +TYT ++ L K K++ +AL KM S PD Y+++I L R+ +A
Sbjct: 7 CSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEAR 66
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ E+M + + PNV+TY +I C + A+ LL KM + C P TY L+
Sbjct: 67 KFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGL 125
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C+ +R LL M + D TY +L+ G +S K + A FE+++++G P
Sbjct: 126 CKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDV 185
Query: 512 STYKMLEEKLEKKRLGNAKERIN 534
TY L + L K+ G KE I+
Sbjct: 186 VTYSCLIDGLCKE--GRLKEAID 206
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 73/156 (46%), Gaps = 1/156 (0%)
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
+ ++ C D Y+SLI L K R++ A M +G P+V TY +I + C +
Sbjct: 2 VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
A K L++M P+ TY L+ C+ R+ LL+ M K V A TY S
Sbjct: 62 LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPT-AVTYNS 120
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L+ GL ++ + A EEM+ G +P TY L
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTL 156
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELN-NGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N M+ L K + ELV+E N V + T T++ L R + D+A +R
Sbjct: 362 FNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYT--TVIDGLCREKKVDEACRVYRK 419
Query: 223 M-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRK 281
M ++ G ++ S L+ L ++ A + ++E K C+P + +N+LI + K +
Sbjct: 420 MLEEPGCLPNSITYSTLITGLCNAGMLDRA-RGYIE-KGCVP-NIGTYNLLIDAFRKANR 476
Query: 282 VDDAQKAMKEMFQQGFS 298
+DA++ + +M Q+GF
Sbjct: 477 DEDARELLDDMVQRGFG 493
>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 541
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/373 (28%), Positives = 179/373 (47%), Gaps = 16/373 (4%)
Query: 166 TMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK 225
T V +L F W L+ LA + ++RR R GR A+ AF+ +++
Sbjct: 75 TAVSLLTSRGLFAAAWRLLLAPSPTPP---PLAAFAPLVRRYARLGRAPAALRAFQFLRR 131
Query: 226 ----YGVEKDTRA----LSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS---QIFNILIH 274
Y D A L++ +D L K A ++F ++ P S + +NIL+H
Sbjct: 132 HPDRYMAGGDIPAAASLLNMAVDALCKEGHPRAAVELFERWRREEPDSPPDERAYNILLH 191
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
GW + ++D K EM G P VV+Y IE C ++ + L EM+E+G +
Sbjct: 192 GWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEA 251
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+++T +++AL +A + +A KV EK P+ S ++SL+ K G + A+ +
Sbjct: 252 NLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVL 311
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ M ++G+ P TYN + S+ E+ + KM + PD TY L+KM R
Sbjct: 312 KVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRA 371
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
R++++ ++ M + D T L+ L + E AC+ FE+M +GIVP + TY
Sbjct: 372 NRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITY 431
Query: 515 KMLEEKLEKKRLG 527
+ L +L KRLG
Sbjct: 432 QKLMREL--KRLG 442
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 125/268 (46%), Gaps = 2/268 (0%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
F W + + YN ++ ++ + + +L EM L ++ T T++
Sbjct: 169 FERWRREEPDSPPDERAYNILLHGWSRAGRLDKVGKLWAEM-RLAGVRPTVVTYGTLIEG 227
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLS 265
L R D A+ M++ G+E + + ++ L + + A+KV +F + +
Sbjct: 228 LCVKRRPDQAIALLDEMREEGIEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPN 287
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
FN L+ G+CK + A +K M ++G SP +Y F + + D +
Sbjct: 288 ISTFNSLVMGYCKHGDLAGASSVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYS 347
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
+M G P +TY +++ L +A ++ +++ ++M++ PD + + LI +L +
Sbjct: 348 KMIGNGYSPDQLTYVLLVKMLSRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRH 407
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMI 413
+ ++A FEDM K+G+VP +TY ++
Sbjct: 408 QFEEACAEFEDMFKRGIVPQYITYQKLM 435
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/201 (19%), Positives = 88/201 (43%), Gaps = 2/201 (0%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
N +V L ++ +F +++++ L +++T ++++ + G A + M
Sbjct: 257 NPIVYALAQAGRFQDAHKVLEKF-PLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMT 315
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVD 283
+ G+ TR + T K + VE + + Q+ + +L+ + +++
Sbjct: 316 ERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLE 375
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+ ++EM GF PD+ + T I CR F + ++M ++G P ITY +M
Sbjct: 376 LVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLM 435
Query: 344 HALGKAKQINEALKVYEKMKS 364
L + ++ K+ M+S
Sbjct: 436 RELKRLGLVHLIQKLTNLMRS 456
>gi|297737085|emb|CBI26286.3| unnamed protein product [Vitis vinifera]
Length = 181
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 77/124 (62%), Positives = 92/124 (74%), Gaps = 4/124 (3%)
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+L + + A E++E M NVLTYNTMIS+AC S+EE+ALKLL KMEE CKP
Sbjct: 39 VLPLSSEISKALEVYEKMNGS----NVLTYNTMISAACMHSQEEDALKLLLKMEESSCKP 94
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY+PLLKMCCR RMKVL+ LL HMFKND S++AGTY+ LV GL +SGKLE AC FF
Sbjct: 95 DLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDTSLEAGTYSLLVHGLCKSGKLEHACLFF 154
Query: 500 EEMI 503
EEM+
Sbjct: 155 EEMV 158
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
E+ EK +V+TY ++ A Q +ALK+ KM+ C PD + YS L+ + +
Sbjct: 51 EVYEKMNGSNVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNN 110
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
R+K + + M K TY+ ++ C + E+A ++M
Sbjct: 111 RMKVLSALLNHMFKNDTSLEAGTYSLLVHGLCKSGKLEHACLFFEEM 157
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 46/94 (48%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N +I C + +DA K + +M + PD+ +Y+ ++ CR + + L M
Sbjct: 64 YNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPLLKMCCRNNRMKVLSALLNHMF 123
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+ TY++++H L K+ ++ A +E+M
Sbjct: 124 KNDTSLEAGTYSLLVHGLCKSGKLEHACLFFEEM 157
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/115 (23%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ KA+ E++++ +V++Y I C L +M+E CKP + TY+ +
Sbjct: 44 SEISKAL-EVYEKMNGSNVLTYNTMISAACMHSQEEDALKLLLKMEESSCKPDLNTYSPL 102
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
+ + ++ + M +D + YS L+ L K+G+++ A FE+M
Sbjct: 103 LKMCCRNNRMKVLSALLNHMFKNDTSLEAGTYSLLVHGLCKSGKLEHACLFFEEM 157
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 177/370 (47%), Gaps = 39/370 (10%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDC 261
++R V+ + + EAFR +K G+ A + L+ LVK V+ A++++ E +
Sbjct: 294 LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSG 353
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ ++ NI+I+ CK +K+++ + + +M ++G PDVV+Y I YCR+ +
Sbjct: 354 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 413
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQ-------INEALKV---------------- 358
+ + M KG KP V TY +++ L K + ++E LK+
Sbjct: 414 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC 473
Query: 359 ------------YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
+++M S +PD +S+LI +LSK G + A + F DMK G+ P+
Sbjct: 474 CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 533
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+ Y +I C ALK+ +M E C D TY +L C++K + + L T
Sbjct: 534 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTE 593
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
M + V D T+ +L+ G + G + A + FE MI + + P TY L + K
Sbjct: 594 MTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK--- 650
Query: 527 GNAKERINKL 536
G+ E++N+L
Sbjct: 651 GSEMEKVNEL 660
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 171/362 (47%), Gaps = 2/362 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ L K+ K+ ++ EM ++ AT + ++ R DA F M
Sbjct: 431 YNAIINGLCKTGKYLRAKGVLDEMLKIGMS-PDTATYNILLVECCRNDNMMDAERIFDEM 489
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKV 282
GV D + S L+ L K ++ A K F + K+ + + I+ ILI G+C+ +
Sbjct: 490 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 549
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A K EM +QG DVV+Y + C+EK + D+ EM E+G P T+T +
Sbjct: 550 SEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 609
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K +N+A+ ++E M + PD Y++LI K ++ NE++ DM + +
Sbjct: 610 INGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 669
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN ++Y +I+ C A +L +M E + T ++K CR +
Sbjct: 670 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 729
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L++M + D TY +L+ G I+ ++ A + +M + G++P TY ++
Sbjct: 730 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFS 789
Query: 523 KK 524
++
Sbjct: 790 RQ 791
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 89/359 (24%), Positives = 173/359 (48%), Gaps = 12/359 (3%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
N+++ L K L WE+ +E+ + +G V++ T++ ++ L + + ++ M
Sbjct: 327 NSLLGGLVKVGWVDLAWEIYQEV--VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDM 384
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-----FKDCIPLSSQIFNILIHGWCK 278
++ GV D + L++ + +E A+++ K C+ +N +I+G CK
Sbjct: 385 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCV----FTYNAIINGLCK 440
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
T K A+ + EM + G SPD +Y + CR + + EM +G P +++
Sbjct: 441 TGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 500
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
++ ++ L K +++ALK + MK+ PD Y+ LI + G + +A ++ ++M
Sbjct: 501 FSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML 560
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+QG +V+TYNT+++ C A +L +M E PD T+ L+ + M
Sbjct: 561 EQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMN 620
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M + ++ D TY +L+ G + ++E + +MIS+ I P H +Y +L
Sbjct: 621 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGIL 679
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 153/349 (43%), Gaps = 36/349 (10%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L + S ++ L + G D A++ FR MK G+ D ++L+ + + A KV
Sbjct: 498 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 557
Query: 257 E-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E + L +N +++G CK + + +A + EM ++G PD ++T I Y ++
Sbjct: 558 EMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDG 617
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ K + M ++ KP V+TY ++ K ++ + +++ M S P+ Y
Sbjct: 618 NMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYG 677
Query: 376 SLI------------FIL-----------------------SKAGRVKDANEIFEDMKKQ 400
LI F L +AG A+E +M +
Sbjct: 678 ILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLK 737
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+VP+ +TYNT+I+ + A L+ KME PD TY +L R+ RM+
Sbjct: 738 GIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEA 797
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
++ M + V+ D TY SL+ G + L+ A +EM+ +G VP
Sbjct: 798 ELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 2/278 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ L K K EL EM E + T +T++ + G + AV F M
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEMTE-RGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMM 629
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
+ ++ D + L+D KG+ +E +++ + + I + ILI+G+C V
Sbjct: 630 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCV 689
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A + EM ++GF +++ ++ YCR + K D+ L M KG P ITY +
Sbjct: 690 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 749
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K + ++ A + KM++ LPD Y+ ++ S+ GR+++A I M ++GV
Sbjct: 750 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 809
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
P+ TY ++I+ ++ + A ++ +M + PD
Sbjct: 810 NPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 18/253 (7%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
S Q F+ +IH ++R++ DAQ + M ++ V + Y
Sbjct: 235 SLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTY------------- 281
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
C + + + +++ +A+++ E + + +KS + +SL+ L K
Sbjct: 282 -----GNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKV 336
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G V A EI++++ + GV NV T N MI++ C + EN L MEE PD TY
Sbjct: 337 GWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY 396
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ CR+ ++ L+ M + TY +++ GL ++GK A +EM+
Sbjct: 397 NTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 456
Query: 505 KGIVPYHSTYKML 517
G+ P +TY +L
Sbjct: 457 IGMSPDTATYNIL 469
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 36/228 (15%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDE------------LNNGYVSLATMSTIMRRLVRGG 211
YNT++D K + + EL +M L NGY ++ +S
Sbjct: 641 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS---------- 690
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG-----NSVE-HAYKVFLEFKDCIPLS 265
EAFR + VEK A + +T+VKG N+V+ + + K +P
Sbjct: 691 ------EAFRLWDEM-VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP-D 742
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+N LI+G+ K +D A + +M G PDV++Y + + R+ ++ + +
Sbjct: 743 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIML 802
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+M E+G P TYT +++ + EA +V+++M +PD F
Sbjct: 803 KMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 850
>gi|125580078|gb|EAZ21224.1| hypothetical protein OsJ_36877 [Oryza sativa Japonica Group]
Length = 726
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 185/392 (47%), Gaps = 9/392 (2%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
D+ AF FF WA Q Y H PE+++ M+ +L ++ +V+ M + G V
Sbjct: 105 GDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLM--IRRG-VRRG 161
Query: 199 T--MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
T + +M R G+ A+ M+K G D ++ ++ LV V+ A + F
Sbjct: 162 TEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALE-FA 220
Query: 257 EFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E + + + +N LI G C R+V DA + + M Q G PD +SY + C+E
Sbjct: 221 ERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKE 280
Query: 315 KDFRKVDDTLKEMQ-EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
K +V L+ M+ + G P +TY +++H L K +EAL+ + + D
Sbjct: 281 KRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVG 340
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
YS+++ GR+ +A EI +M +G P+V+TY+T++ C E + A K+++ M
Sbjct: 341 YSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMY 400
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
++ CKP+ T+ LL C+ + LL + + TY+ ++ G GKL+
Sbjct: 401 KNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLK 460
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+C +M+ KG P +L L K R
Sbjct: 461 ESCDVVVQMLQKGFFPTTVEINLLIHALCKDR 492
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 172/355 (48%), Gaps = 5/355 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ L +++ E++ M L NG + T+M L + R ++ +
Sbjct: 235 YNCLIKGLCGARRVVDAMEMIGVM--LQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQR 292
Query: 223 MKK-YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTR 280
M+ G+ D +VL+ L K + A + E + ++ ++ ++H +C
Sbjct: 293 MRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNG 352
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ +A++ + EM +G PDVV+Y+ ++ +CR + + +K M + CKP+ +T+T
Sbjct: 353 RMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHT 412
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+++ L K + +EA ++ K + + P YS ++ + G++K++ ++ M ++
Sbjct: 413 ALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQK 472
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P + N +I + C + A +++ + C + + ++ R+ ++
Sbjct: 473 GFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESA 532
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
L+ M+ ++ D TY +V L + G+L+ A E+M+++G++P TY+
Sbjct: 533 LSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYR 587
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 158/389 (40%), Gaps = 44/389 (11%)
Query: 98 DKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGY 157
DKIS + +K VE ++G + N + N L A +
Sbjct: 266 DKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEF 325
Query: 158 MHTPEMYNTMVDVLGKSK---KFCLMWELVKEMDELNNGYVS------LATMSTIMRRLV 208
+ E VD +G S FCL + E E+ +S + T ST++
Sbjct: 326 LRESEGKRFRVDEVGYSAIVHSFCLNGRMA-EAKEIVGEMISKGCQPDVVTYSTVVDGFC 384
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
R G D A + + M K + +T + L++ L K A+++ + ++ S I
Sbjct: 385 RIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDI 444
Query: 269 -FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+++++HG+ + K+ ++ + +M Q+GF P V I C+++ + D +++
Sbjct: 445 TYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQC 504
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
Q KGC +V+ +T V+H + + AL + + M + PD Y+ ++ L K GR+
Sbjct: 505 QSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRL 564
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMI---------------------------------S 414
K+A + E M +GV+P +TY T+I
Sbjct: 565 KEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAYNQVVE 624
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCET 443
CA + A LL K+ D +T
Sbjct: 625 KLCAFGKLNEAYSLLYKILRTASVRDAQT 653
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 197/420 (46%), Gaps = 46/420 (10%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVRGGRY 213
+TP++ Y+T+V+ + + +W+L++ M N Y+ +I+ L R +
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYI----YGSIIGLLCRICKL 332
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIP-------- 263
+A EAF M + G+ DT + L+D K + A K F E +D P
Sbjct: 333 AEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 264 --------------------------LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
S F LI+G+CK + DA + M Q G
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
SP+VV+YT I+ C+E D ++ L EM + G +P++ TY +++ L K+ I EA+K
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 512
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ + ++ DT Y++L+ K+G + A EI ++M +G+ P ++T+N +++ C
Sbjct: 513 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E+ KLL M P+ T+ L+K C + +K + M V D
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK-LEKKRLGNAKERINKL 536
TY +LV+G ++ ++ A F+EM KG STY +L + L++K+ A+E +++
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 153/327 (46%), Gaps = 2/327 (0%)
Query: 193 GYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
GY + + ST++ R G D + MK+ G++ ++ ++ L + + A
Sbjct: 276 GYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEA 335
Query: 252 YKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+ F E + I + ++ LI G+CK + A K EM + +PDV++YT I
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG 395
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
+C+ D + EM KG +P +T+T +++ KA + +A +V+ M C P+
Sbjct: 396 FCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPN 455
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y++LI L K G + ANE+ +M K G+ PN+ TYN++++ C E A+KL+
Sbjct: 456 VVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVG 515
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
+ E D TY L+ C+ M +L M + T+ L+ G G
Sbjct: 516 EFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHG 575
Query: 491 KLELACSFFEEMISKGIVPYHSTYKML 517
LE M++KGI P +T+ L
Sbjct: 576 MLEDGEKLLNWMLAKGIAPNATTFNSL 602
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/331 (29%), Positives = 161/331 (48%), Gaps = 8/331 (2%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG-NSVEHAYKVFLEFKD---CI 262
LV G +A F M YG+ + +V + L K A VF EF + C
Sbjct: 185 LVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCW 244
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
++S +NI+IH C+ ++ +A + M +G++PDV+SY+ + YCR + KV
Sbjct: 245 NVAS--YNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 302
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
++ M+ KG KP+ Y ++ L + ++ EA + + +M LPDT Y++LI
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K G ++ A++ F +M + + P+VLTY +IS C + A KL +M +PD
Sbjct: 363 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSV 422
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
T+ L+ C+ MK + HM + S + TY +L+ GL + G L+ A EM
Sbjct: 423 TFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 482
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
G+ P TY + L K GN +E +
Sbjct: 483 WKIGLQPNIFTYNSIVNGLCKS--GNIEEAV 511
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 162/324 (50%), Gaps = 3/324 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++A+ + ++ + + GR +A M+ G D + S +++ + ++ +K+
Sbjct: 245 NVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLI 304
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
++ K P +S I+ +I C+ K+ +A++A EM +QG PD V YT I+ +C+
Sbjct: 305 EVMKRKGLKP-NSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCK 363
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D R EM + P V+TYT ++ + + EA K++ +M PD+
Sbjct: 364 RGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVT 423
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
++ LI KAG +KDA + M + G PNV+TY T+I C + ++A +LL +M
Sbjct: 424 FTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMW 483
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+ +P+ TY ++ C+ ++ L+ ++ D TY +L+ +SG+++
Sbjct: 484 KIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMD 543
Query: 494 LACSFFEEMISKGIVPYHSTYKML 517
A +EM+ KG+ P T+ +L
Sbjct: 544 KAQEILKEMLGKGLQPTIVTFNVL 567
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 67/152 (44%), Gaps = 5/152 (3%)
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT---YNTMISSACARSEE 422
D D + +L G +++A +FE M G+V +V + Y T +S C ++
Sbjct: 170 DWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKT-- 227
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
A+ + ++ E + +Y ++ C+ R+K + LL M + D +Y+++
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
V G G+L+ E M KG+ P Y
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIY 319
>gi|77557056|gb|ABA99852.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
Length = 726
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 109/392 (27%), Positives = 185/392 (47%), Gaps = 9/392 (2%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
D+ AF FF WA Q Y H PE+++ M+ +L ++ +V+ M + G V
Sbjct: 105 GDVRRAFEFFRWADRQWRYRHAPEVFDEMLSLLSNTRLHDPARRVVRLM--IRRG-VRRG 161
Query: 199 T--MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
T + +M R G+ A+ M+K G D ++ ++ LV V+ A + F
Sbjct: 162 TEQFAQLMLSYSRAGKLRSAMRVLHLMQKDGCAPDISICNMAVNVLVVAGRVDKALE-FA 220
Query: 257 EFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E + + + +N LI G C R+V DA + + M Q G PD +SY + C+E
Sbjct: 221 ERMRRVGVEPDVYTYNCLIKGLCGARRVVDAMEMIGVMLQNGCPPDKISYYTVMSFLCKE 280
Query: 315 KDFRKVDDTLKEMQ-EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
K +V L+ M+ + G P +TY +++H L K +EAL+ + + D
Sbjct: 281 KRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVG 340
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
YS+++ GR+ +A EI +M +G P+V+TY+T++ C E + A K+++ M
Sbjct: 341 YSAIVHSFCLNGRMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMY 400
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
++ CKP+ T+ LL C+ + LL + + TY+ ++ G GKL+
Sbjct: 401 KNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLK 460
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+C +M+ KG P +L L K R
Sbjct: 461 ESCDVVVQMLQKGFFPTTVEINLLIHALCKDR 492
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 172/355 (48%), Gaps = 5/355 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ L +++ E++ M L NG + T+M L + R ++ +
Sbjct: 235 YNCLIKGLCGARRVVDAMEMIGVM--LQNGCPPDKISYYTVMSFLCKEKRVEEVRGLLQR 292
Query: 223 MKK-YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTR 280
M+ G+ D +VL+ L K + A + E + ++ ++ ++H +C
Sbjct: 293 MRNDAGLFPDQVTYNVLIHGLAKHGHADEALEFLRESEGKRFRVDEVGYSAIVHSFCLNG 352
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ +A++ + EM +G PDVV+Y+ ++ +CR + + +K M + CKP+ +T+T
Sbjct: 353 RMAEAKEIVGEMISKGCQPDVVTYSTVVDGFCRIGELDQARKMMKHMYKNDCKPNTVTHT 412
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+++ L K + +EA ++ K + + P YS ++ + G++K++ ++ M ++
Sbjct: 413 ALLNGLCKVGKTSEAWELLNKSEEEWWTPSDITYSVVMHGFRREGKLKESCDVVVQMLQK 472
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P + N +I + C + A +++ + C + + ++ R+ ++
Sbjct: 473 GFFPTTVEINLLIHALCKDRKPAEAKDFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESA 532
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
L+ M+ ++ D TY +V L + G+L+ A E+M+++G++P TY+
Sbjct: 533 LSLMDDMYLSNRHPDVVTYTVVVDALGKKGRLKEATGLVEKMLNRGVLPTPVTYR 587
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 88/389 (22%), Positives = 158/389 (40%), Gaps = 44/389 (11%)
Query: 98 DKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGY 157
DKIS + +K VE ++G + N + N L A +
Sbjct: 266 DKISYYTVMSFLCKEKRVEEVRGLLQRMRNDAGLFPDQVTYNVLIHGLAKHGHADEALEF 325
Query: 158 MHTPEMYNTMVDVLGKSK---KFCLMWELVKEMDELNNGYVS------LATMSTIMRRLV 208
+ E VD +G S FCL + E E+ +S + T ST++
Sbjct: 326 LRESEGKRFRVDEVGYSAIVHSFCLNGRMA-EAKEIVGEMISKGCQPDVVTYSTVVDGFC 384
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
R G D A + + M K + +T + L++ L K A+++ + ++ S I
Sbjct: 385 RIGELDQARKMMKHMYKNDCKPNTVTHTALLNGLCKVGKTSEAWELLNKSEEEWWTPSDI 444
Query: 269 -FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+++++HG+ + K+ ++ + +M Q+GF P V I C+++ + D +++
Sbjct: 445 TYSVVMHGFRREGKLKESCDVVVQMLQKGFFPTTVEINLLIHALCKDRKPAEAKDFMEQC 504
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
Q KGC +V+ +T V+H + + AL + + M + PD Y+ ++ L K GR+
Sbjct: 505 QSKGCTINVVNFTTVIHGFSRQGDLESALSLMDDMYLSNRHPDVVTYTVVVDALGKKGRL 564
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMI---------------------------------S 414
K+A + E M +GV+P +TY T+I
Sbjct: 565 KEATGLVEKMLNRGVLPTPVTYRTVIHRYCEKGNLEDLLNLLEKMLARQEMKSAYNQVVE 624
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCET 443
CA + A LL K+ D +T
Sbjct: 625 KLCAFGKLNEAYSLLYKILRTASVRDAQT 653
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 185/363 (50%), Gaps = 4/363 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
++ +++ L K KF ++V++M G+ S+ T +TI+ + G+ A +
Sbjct: 232 FDVVINGLCKVGKFQKAGDVVEDMKAW--GFSPSVITYNTIIDGYCKAGKMFKADALLKE 289
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M + + ++L+D + +V A KVF E + + + +N LI+G C K
Sbjct: 290 MVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGK 349
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A +M G P+VV+Y I +C++K ++ + L ++ ++G P+VIT+
Sbjct: 350 LDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNT 409
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ A GKA ++++A + M P+ S Y+ LI + G VK+A ++ ++M+ G
Sbjct: 410 LIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNG 469
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ +++TYN ++ + C + E A++LL +M E P TY L+ R+
Sbjct: 470 LKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAAL 529
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ T M K + TY L++G GKLE A EM+ KG++P +TY +L +++
Sbjct: 530 NVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEM 589
Query: 522 EKK 524
+K
Sbjct: 590 MEK 592
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 117/469 (24%), Positives = 214/469 (45%), Gaps = 34/469 (7%)
Query: 67 PSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVS 126
PSL + + + S S+ +H D IS++++KQ+ S K + V +
Sbjct: 19 PSLDPKLNNTKTPFSSPNSTYTTPNSHTFDTPTISQLIAKQHWSKLKTI-------VKET 71
Query: 127 N--SLVEQTLRRFSNDLTP--AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
N SL++ F+++ P +F W + + G +H E + ++ +L +K + +
Sbjct: 72 NPSSLLQHL---FNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRA 128
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
L+ + N + S STI L G + A M + K+ MD
Sbjct: 129 LLDSFAK--NAHYS---NSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGE-----MDLA 178
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
++G Y L C P+ + K ++ + KEM ++ +VV
Sbjct: 179 LEGFDRAGDYGFRLSALSCNPMLVSL--------VKEGRIGVVESVYKEMIRRRIGVNVV 230
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
++ I C+ F+K D +++M+ G PSVITY ++ KA ++ +A + ++M
Sbjct: 231 TFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEM 290
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+ P+ ++ LI + V A ++FE+M++QG+ PNV+TYN++I+ C+ +
Sbjct: 291 VAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKL 350
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+ AL L KM KP+ TY L+ C+KK +K +L + K ++ + T+ +L
Sbjct: 351 DEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTL 410
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
+ ++G+++ A M+ G+ P STY L R GN KE
Sbjct: 411 IDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGF--CREGNVKE 457
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 118/259 (45%), Gaps = 28/259 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA----TMSTIMRRLVRGGRYDDAVEA 219
YN +++ K K ++ E + +D++ G LA T +T++ + GR DDA
Sbjct: 372 YNALINGFCKKK---MLKEAREMLDDI--GKRGLAPNVITFNTLIDAYGKAGRMDDAFLL 426
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCK 278
M GV + + L+ + +V+ A K+ E + + + +NIL+ CK
Sbjct: 427 RSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCK 486
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ A + + EMF+ G +P ++Y I+ Y RE + + M++KG + +++T
Sbjct: 487 KGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVT 546
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y +++ ++ EA ++ +M +P+ + Y L ++M
Sbjct: 547 YNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL----------------RDEMM 590
Query: 399 KQGVVPNV--LTYNTMISS 415
++G +P++ YN ISS
Sbjct: 591 EKGFIPDIDGHLYNVSISS 609
>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
Length = 845
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 162/327 (49%), Gaps = 3/327 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++++ R + D A + F M G +D + + L++ L + ++ A ++F E
Sbjct: 190 TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM 249
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
++ L+ G C + ++ ++ M + G+ P +Y ++ CRE+ +
Sbjct: 250 DQP---DMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAK 306
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ ++ L+EM EKG P V+T T V++A K ++++AL+V E MK C P+ Y++L+
Sbjct: 307 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 366
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
G+V A + M+ GV P+ +TYN +I C E+A +LL+ ME D
Sbjct: 367 QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 426
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
D TY L+ C+ R L + + +A T+ SL+ GL +SGK ++A F
Sbjct: 427 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKF 486
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKR 525
E+M+S G P TY E L K +
Sbjct: 487 LEKMVSAGCTPDTYTYSSFIEHLCKMK 513
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 158/319 (49%), Gaps = 24/319 (7%)
Query: 207 LVRG----GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKD 260
L+RG G + A R M+ G+ D + L++ L K + A +F LE +
Sbjct: 400 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P ++ FN LI+G CK+ K D A K +++M G +PD +Y+ FIEH C+ K ++
Sbjct: 460 IKP-NAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG 518
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+ EM +K KPS + YTIV+H L K + + + +M S C PD Y++ +
Sbjct: 519 LSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 578
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
GR+ +A + +M K GV + + YNT++ + + ++A+ +L++M P+
Sbjct: 579 YCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 638
Query: 441 CETYAPLLKMCCRKKRMK-VLNFL---------LTHMF-------KNDVSMDAGTYASLV 483
TY LL+ R + ++ VL LT +F KN+ ++GTY+S++
Sbjct: 639 QFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSIL 698
Query: 484 RGLIESGKLELACSFFEEM 502
G E G+ E A S M
Sbjct: 699 EGFSEDGRTEEATSLVSLM 717
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 167/360 (46%), Gaps = 6/360 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ Y T+++ L ++ + EL EMD+ + + + +++ L R ++
Sbjct: 218 GFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPD-----MHMYAALVKGLCNAERGEE 272
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIH 274
+ R MK+ G TRA + ++D + + A ++ E F+ + +I+
Sbjct: 273 GLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVIN 332
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
+CK ++ DA + ++ M +G P+V +Y ++ +C E K L +M+ G P
Sbjct: 333 AYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNP 392
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+TY +++ I A ++ M+ D + D Y++LI L K GR A +F
Sbjct: 393 DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF 452
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ ++ +G+ PN +T+N++I+ C + + A K L+KM C PD TY+ ++ C+
Sbjct: 453 DSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 512
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
K + + M + DV Y ++ L++ L + EM+S G P TY
Sbjct: 513 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 572
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 183/400 (45%), Gaps = 9/400 (2%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
N+++ RR DL A + + ++G+ +N+++ ++ + + +L +
Sbjct: 157 NAVIRSLCRR--ADLARALRYLS-LMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDK 213
Query: 187 MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
M L + + +T++ L GR D+AVE F M + D + L+ L
Sbjct: 214 M-PLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAE 268
Query: 247 SVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
E + K+ S++ + ++ C+ RK +A++ ++EMF++G +P VV+ T
Sbjct: 269 RGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCT 328
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I YC+E L+ M+ +GCKP+V TY ++ ++++A+ + KM++
Sbjct: 329 AVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRAC 388
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
PD Y+ LI G ++ A + M+ G++ + TYN +I++ C + A
Sbjct: 389 GVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQA 448
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L +E KP+ T+ L+ C+ + + L M + D TY+S +
Sbjct: 449 CSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEH 508
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
L + + SF EM+ K + P Y ++ KL K+R
Sbjct: 509 LCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKER 548
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 163/375 (43%), Gaps = 4/375 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGR 212
+ G+ + Y +VD + +K E+++EM E G + T + ++ + GR
Sbjct: 282 ELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFE--KGLAPCVVTCTAVINAYCKEGR 339
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNI 271
DA+ MK G + + + L+ V A + + + C + + +N+
Sbjct: 340 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 399
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G C ++ A + ++ M G D +Y I C++ + ++ +G
Sbjct: 400 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 459
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
KP+ +T+ +++ L K+ + + A K EKM S C PDT YSS I L K ++
Sbjct: 460 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 519
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+M ++ V P+ + Y +I + +M C PD TY ++
Sbjct: 520 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 579
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C + R+ +L M KN V++D Y +L+ G G+ + A S ++M S VP
Sbjct: 580 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 639
Query: 512 STYKMLEEKLEKKRL 526
TY +L L + RL
Sbjct: 640 FTYFILLRHLVRMRL 654
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 128/290 (44%), Gaps = 31/290 (10%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
++ +N +I C+ + A + + M + G+ PD ++ I YCR D
Sbjct: 152 TAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLF 211
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC----------------- 367
+M +G V++Y ++ L +A +I+EA++++ +M D
Sbjct: 212 DKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGE 271
Query: 368 --------------LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
P T Y++++ + + K+A E+ ++M ++G+ P V+T +I
Sbjct: 272 EGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 331
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
++ C +AL++L+ M+ CKP+ TY L++ C + ++ LL M V+
Sbjct: 332 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVN 391
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
DA TY L+RG G +E A M G++ TY L L K
Sbjct: 392 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 441
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 167/418 (39%), Gaps = 62/418 (14%)
Query: 164 YNTMVDVL---GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
YN +++ L G++ + C +++ ++ N T ++++ L + G+ D A +
Sbjct: 432 YNALINALCKDGRTDQACSLFDSLETRGIKPNA----VTFNSLINGLCKSGKADIAWKFL 487
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCK 278
M G DT S ++ L K + E KD P S+ + I+IH K
Sbjct: 488 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP-STVNYTIVIHKLLK 546
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R + EM G +PDVV+YT + YC E + ++ L EM + G +
Sbjct: 547 ERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 606
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL------------IFILSKAG- 385
Y +M Q + A+ + ++M S +P+ Y L + L+ AG
Sbjct: 607 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGV 666
Query: 386 ----RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+ D +F+ MKK +PN TY++++ E A L+ M+ED +
Sbjct: 667 WKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNE 726
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF-- 499
+ Y L+ C+ KR L+ M ++ +Y L+ GLI G+ + A F
Sbjct: 727 DIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMN 786
Query: 500 --------EEMISKGIV-------------------------PYHSTYKMLEEKLEKK 524
+E++ K I+ P H TY ML E+L +
Sbjct: 787 SRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPDR 844
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 5/242 (2%)
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+P +Y I CR D + L M G +P T+ ++ + Q++ A
Sbjct: 150 APTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARD 209
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+++KM D Y++LI L +AGR+ +A E+F +M + P++ Y ++ C
Sbjct: 210 LFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLC 265
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E L +L++M+E +P YA ++ CR+++ K +L MF+ ++
Sbjct: 266 NAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVV 325
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
T +++ + G++ A E M +G P TY L + + ++ A +NK+
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 385
Query: 537 LA 538
A
Sbjct: 386 RA 387
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 1/130 (0%)
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGV-VPNVLTYNTMISSACARSEEENALKLLQKM 432
++SL+ LS+ A +F M + P TYN +I S C R++ AL+ L M
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+PD T+ L+ CR ++ V L M + D +YA+L+ GL E+G++
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 239
Query: 493 ELACSFFEEM 502
+ A F EM
Sbjct: 240 DEAVELFGEM 249
>gi|255557793|ref|XP_002519926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540972|gb|EEF42530.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 481
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/445 (26%), Positives = 215/445 (48%), Gaps = 20/445 (4%)
Query: 100 ISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMH 159
+S IL++ SP + AL G++++ ++ + L+ ++ A FF WA ++G H
Sbjct: 42 LSDILTRV--SPHDMESALSSTGINLTCDIIHEVLKLSYSNPASAVEFFRWAG-RSG-TH 97
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
TP +N MVD+LGK++ F MW+ ++ M + N +S+AT +++ + G + +A+ +
Sbjct: 98 TPYSWNLMVDLLGKNQLFEAMWDAIRSMKQEN--VLSMATFASVFGSYCKAGSFSEAIMS 155
Query: 220 FRGMKKYGVEKDTRALSVLMDTLV-KGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCK 278
F M KYG+++D A++ L+ + + N A + F K IP + IL+ GW K
Sbjct: 156 FDIMDKYGIQQDVIAVNSLLSAICNEDNQTIKAVEFFDRIKLKIPPDGDTYAILLEGWEK 215
Query: 279 TRKVDDAQKAMKEM-FQQGFSP-DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
A+ EM G+SP ++ +Y F+ RE D L+ M+EKGC P +
Sbjct: 216 EGNAAKAKNIFGEMVIHVGWSPENMPAYNAFLNLLVRESQTDDAFDFLRLMKEKGCLPGL 275
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
Y+ + L K + A+ +++ M +P+ Y+S+I +L + +A +F+D
Sbjct: 276 KFYSDALDMLLKRNDVLHAVPMWDIMVDTGLMPNLLMYNSMIGLLCNNNDIDNAFRLFDD 335
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP---DCETYAPLLKMCCR 453
M G P+ LTY + + A +M ++ P DC A + M
Sbjct: 336 MVFHGAFPDFLTYKMIFRCLVKNKKVSQAASFFHEMIKNENPPTHLDCAA-AITMFMGGD 394
Query: 454 KKRM--KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
M ++ N+++ ++ +D A LV GL G+L F E+M+ + I +
Sbjct: 395 DPEMAIEIWNYMVD---DQELPLDESANALLV-GLGNLGRLSEVSRFAEDMLDRRINIHE 450
Query: 512 STYKMLEEKLEKKRLGNAKERINKL 536
ST L+ K+ ++++R + L
Sbjct: 451 STMAKLKASFYKEG-RSSRDRFDSL 474
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 108/426 (25%), Positives = 175/426 (41%), Gaps = 71/426 (16%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKK 176
AL + ++V L RF + P++ FF WA G+ HT Y M+ +LGK+++
Sbjct: 184 ALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATVSGGFTHTTITYCKMLHILGKTRQ 243
Query: 177 FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALS 236
F M +++EM + G +S+ ++ G +AV F M+K G + + +
Sbjct: 244 FESMVAMIQEMGKA--GALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFN 301
Query: 237 VLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L+ L K A +VF + + + L+ WC R + +A + EM ++G
Sbjct: 302 CLLVALAKEGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKG 361
Query: 297 FSPDVV-----------------------------------SYTCFIEHYCREKDFRKVD 321
PDVV +YT I +C++
Sbjct: 362 MDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAM 421
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ +EMQE C+P V TYT ++ G AKQ++ V E+M C PD Y++LI +L
Sbjct: 422 ECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLL 481
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+ DA I++ M K+G+ P + TYN M+ S
Sbjct: 482 TNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGD--------------------- 520
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
YA M C + M + + D +Y + G I G+ E A + EE
Sbjct: 521 SNYA----MGCA---------VWEEMHQRGICPDVNSYTVFINGHIRHGRPEEAYKYIEE 567
Query: 502 MISKGI 507
MI+KG+
Sbjct: 568 MINKGM 573
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 122/264 (46%), Gaps = 2/264 (0%)
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++H KTR+ + ++EM + G + + ++ I+ + + + + M++ G
Sbjct: 234 MLHILGKTRQFESMVAMIQEMGKAG-ALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNG 292
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
V ++ ++ AL K EA +V++KM PD Y++L+ A + +A
Sbjct: 293 FDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYS-PDLRSYTALMLAWCNARNLVEAG 351
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++ +M ++G+ P+V+ +NTMI A+K+ + M+ P+ TY L++
Sbjct: 352 RVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDH 411
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++ +M + M + D TY L+ G + +++ + EEM KG P
Sbjct: 412 CKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDA 471
Query: 512 STYKMLEEKLEKKRLGNAKERINK 535
TY L + L + + + RI K
Sbjct: 472 RTYNALIKLLTNRNMPDDAARIYK 495
>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 554
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 118/482 (24%), Positives = 228/482 (47%), Gaps = 31/482 (6%)
Query: 75 SHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKV--VEALKGCGVSVSNSLVEQ 132
+HRL +SRI+ V +DK ++ + QS +V ++ + GV +++S +
Sbjct: 7 AHRLIYRSRIAGYV----KAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDL 62
Query: 133 TLRRFSNDLTPAFGF--FTWAKTQTGY------------MHTPEMYNTMVDVLGKSKKFC 178
+S T F FT+++ TG +H E N + D+ +
Sbjct: 63 ANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLH 122
Query: 179 LMW-----ELVKEMDE--LNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
L++ +L E+ E + NG + T + I+ + + ++D A++ +R M G
Sbjct: 123 LLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSP 182
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRKVDDAQKA 288
D +A ++ L G V+ AY++ ++ + LS+ ++N LI G+C+ ++D AQ
Sbjct: 183 DNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAI 242
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
M + G PD+V+Y F+ ++C E LK M+ G +P V +Y ++ + K
Sbjct: 243 KSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICK 302
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
++A + L D Y+++I K G A ++FE+M ++G+ P+V+T
Sbjct: 303 GNCPDKAYLLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVT 362
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
+ I + + A KLL +M E PDC Y ++ C+ ++++ + + M
Sbjct: 363 FTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMV 422
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLG 527
+ +S D ++ +L+ G + ++ A +EEM ++G P TYK++ L E+K++
Sbjct: 423 EQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKIS 482
Query: 528 NA 529
A
Sbjct: 483 IA 484
>gi|225456631|ref|XP_002266698.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74750
[Vitis vinifera]
Length = 875
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 179/362 (49%), Gaps = 7/362 (1%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V+ +S+IL + P EAL+ + Q L++ D A GFF W K QTG
Sbjct: 317 VENVSRILRQLSWGP-AAEEALRNLNCLMDAYQANQVLKQI-QDHPVALGFFYWLKRQTG 374
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDD 215
+ H Y TMV +LG++++F + +L+ EM + +G ++ T + ++ R ++
Sbjct: 375 FKHDGHTYTTMVGILGRARQFGAINKLLAEM--VRDGCQPNVVTYNRLIHSYGRANYLNE 432
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIH 274
AV F M++ G + D L+D K ++ A ++ + ++ + + ++++I+
Sbjct: 433 AVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIIN 492
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
K + A K EM QG P++V+Y I + +++ + ++MQ G +P
Sbjct: 493 CLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQP 552
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+TY+IVM LG + EA ++ +MK + +PD Y L+ + K G V+ + E +
Sbjct: 553 DKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWY 612
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ M G+ PNV T N+++S+ +A LLQ M +P +TY LL CC +
Sbjct: 613 QAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLS-CCTE 671
Query: 455 KR 456
R
Sbjct: 672 AR 673
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 148/319 (46%), Gaps = 9/319 (2%)
Query: 228 VEKDTRALSVLMDTL--------VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKT 279
E+ R L+ LMD ++ + V + +L+ + + ++ +
Sbjct: 333 AEEALRNLNCLMDAYQANQVLKQIQDHPVALGFFYWLKRQTGFKHDGHTYTTMVGILGRA 392
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
R+ K + EM + G P+VV+Y I Y R + MQE GC+P +TY
Sbjct: 393 RQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVTY 452
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ KA ++ AL +Y+KM+ PDT YS +I L KAG + A+++F +M
Sbjct: 453 CTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMVD 512
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
QG VPN++TYN MI+ AL+L + M+ +PD TY+ ++++ ++
Sbjct: 513 QGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLEE 572
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST-YKMLE 518
+ T M + + D Y LV + G +E + +++ M++ G+ P T +L
Sbjct: 573 AEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLLS 632
Query: 519 EKLEKKRLGNAKERINKLL 537
L RL +A + +L
Sbjct: 633 AFLRVHRLSDAYNLLQSML 651
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/282 (20%), Positives = 116/282 (41%), Gaps = 41/282 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ +++ LGK+ +L EM ++ G V +L T + ++ + Y A+E +R
Sbjct: 487 YSVIINCLGKAGHLTSAHKLFCEM--VDQGCVPNLVTYNIMIALQAKARNYPTALELYRD 544
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTR 280
M+ G + D S++M+ L +E A +F E K + +P ++ +L+ W K
Sbjct: 545 MQNAGFQPDKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVP-DEPVYGLLVDLWGKVG 603
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V+ + + + M G P+V + + + R + L+ M G +PS+ TYT
Sbjct: 604 NVEKSWEWYQAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYT 663
Query: 341 IV---------------------------------MHALGKAKQ--INEALKVYEKMKSD 365
++ M A G Q + K + M S+
Sbjct: 664 LLLSCCTEARSSFDMGFCGELMAVTGHPAHMFLLSMPAAGPDGQNVRDHVSKFLDLMHSE 723
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
D +++ L K+G ++A ++E ++ V P+ +
Sbjct: 724 DRESKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 765
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 174/371 (46%), Gaps = 6/371 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-----VSLATMSTIMRRL 207
+ GY Y T+++ L + L +L +EM N G+ +L TI+ L
Sbjct: 189 VRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSL 248
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSS 266
+ G D E F MK G+ D A S ++ + E A +F E D + +
Sbjct: 249 CKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNV 308
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
FN+LI CK K+++A +K M Q+G SPD +Y I+ +C E D
Sbjct: 309 VTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVS 368
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M+ KG + ++Y ++++ K+ ++ EA K+Y +M + +P Y++L+ L + G+
Sbjct: 369 MESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGK 428
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
V+DA +F +MK + P TYN ++ C + A++L +E +P + +
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNC 488
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+ C+ +++++ L + + + TY ++ GL +SG+LE A F M KG
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548
Query: 507 IVPYHSTYKML 517
P T+ L
Sbjct: 549 CAPNLVTFNTL 559
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 156/307 (50%), Gaps = 4/307 (1%)
Query: 181 WELVKEM--DELNNG-YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
WE K + + ++ G + ++ T + ++ L + G+ ++A + M + G DT +
Sbjct: 289 WEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNT 348
Query: 238 LMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L+D ++ A +F+ + I + +N+LI+G+CK+ ++ +A+K +EM +
Sbjct: 349 LIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKE 408
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
P V++Y + RE R + EM+ P TY I++ L K ++EA+
Sbjct: 409 IMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAM 468
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+++ +++ D P ++ LI L KA +++ A E+F + +G+ PNV+TY MI
Sbjct: 469 ELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGL 528
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
C + ENA L MEE C P+ T+ L++ C+ M+ + LL M + D S DA
Sbjct: 529 CKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDA 588
Query: 477 GTYASLV 483
T + +V
Sbjct: 589 STISIVV 595
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 128/255 (50%), Gaps = 6/255 (2%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
NILI+ +C KVD + EM ++G SP+ V++T ++ C + L++M
Sbjct: 130 LNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMV 189
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD------CLPDTSFYSSLIFILS 382
G +P+V+TY +++ L A+K++E+M + + P+ Y ++I L
Sbjct: 190 RMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLC 249
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K G + E+F +MK +G+ P+V+ Y+++I C E A L +M ++ P+
Sbjct: 250 KDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVV 309
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
T+ L+ C+ +M+ N LL M + S D TY +L+ G G+++ A F M
Sbjct: 310 TFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSM 369
Query: 503 ISKGIVPYHSTYKML 517
SKGI +Y +L
Sbjct: 370 ESKGIETDAVSYNVL 384
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 161/350 (46%), Gaps = 14/350 (4%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T +++++ L G R +A R M + G + L++ L + A K+ E
Sbjct: 163 VTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEE 222
Query: 258 -------FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
F I + + +I CK +D ++ EM +G SPDVV+Y+ I
Sbjct: 223 MLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHG 282
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
C + EM ++G P+V+T+ +++ AL KA ++ EA + + M PD
Sbjct: 283 MCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPD 342
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
T Y++LI GR+ DA ++F M+ +G+ + ++YN +I+ C A KL +
Sbjct: 343 TFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYR 402
Query: 431 KMEEDLCK---PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+M +CK P TY LL R+ +++ L M +D++ ++ TY L+ GL
Sbjct: 403 EM---MCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLC 459
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR-LGNAKERINKL 536
++ L A F + + P + L + L K R + A+E N+L
Sbjct: 460 KNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRL 509
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 151/297 (50%), Gaps = 4/297 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++D L K+ K L+K M + + T +T++ GR DDA + F M
Sbjct: 311 FNVLIDALCKAGKMEEANHLLKLMIQRGESPDTF-TYNTLIDGFCLEGRIDDARDLFVSM 369
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ G+E D + +VL++ K + A K++ E K+ +P + +N L+ G + K
Sbjct: 370 ESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMP-TVITYNTLLTGLFREGK 428
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V DA EM +P+ +Y ++ C+ + + ++ +PS+ +
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNC 488
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L KA++I A +++ ++ + P+ Y+ +I L K+G++++A ++F M+++G
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG 548
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
PN++T+NT++ C E + ++LLQ+M E PD T + ++ + + ++ +
Sbjct: 549 CAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYR 605
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 124/242 (51%), Gaps = 8/242 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YN +++ KS + +L +EM E+ ++ T +T++ L R G+ DA F
Sbjct: 381 YNVLINGYCKSGRMVEAKKLYREMMCKEI---MPTVITYNTLLTGLFREGKVRDAWNLFG 437
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKT 279
MK + + ++ ++L+D L K N + A ++F LE D P S QIFN LI G CK
Sbjct: 438 EMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQP-SIQIFNCLIDGLCKA 496
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
RK++ A++ + +G P+V++YT I C+ D M+EKGC P+++T+
Sbjct: 497 RKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTF 556
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+M + ++ + +++ ++M D PD S S ++ +LSK + ++ +
Sbjct: 557 NTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPA 616
Query: 400 QG 401
QG
Sbjct: 617 QG 618
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 124/293 (42%), Gaps = 10/293 (3%)
Query: 263 PLSSQIFNILIHGWCKTRKV--DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P Q+ N L CK+ + +A + +P + S+ + + K + V
Sbjct: 53 PDRGQLENFL-KSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDV 111
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
K M G P IT I+++ +++ L V +M P+T ++SL+
Sbjct: 112 ISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG 171
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED----- 435
L R+ +A + M + G PNV+TY T+++ C A+KL ++M
Sbjct: 172 LCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFG 231
Query: 436 -LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
KP+ Y ++ C+ + L M +S D Y+S++ G+ +G+ E
Sbjct: 232 VTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEG 291
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAKEQKTF 546
A F EM+ +G+ P T+ +L + L K ++ A + ++ + TF
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTF 344
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/394 (27%), Positives = 180/394 (45%), Gaps = 39/394 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
+NT+V L + ++V M E +G + + T S+I+ L GR DDAVE
Sbjct: 305 FNTIVTSLCQQGLVDRAIKVVDHMSE--HGCIPDIVTYSSILDGLCDVGRVDDAVELLSR 362
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
+K YG + DT A + ++ L EHA ++ E DC P FN +I C+
Sbjct: 363 LKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPP-DEVTFNTVIASLCQKG 421
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
VD A K +++M + G +PD+V+Y I+ C E+ + L +Q GCKP ++T+
Sbjct: 422 LVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFN 481
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L + +A ++ M DC PD + ++++I L + G + A E + M +
Sbjct: 482 TLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAEN 541
Query: 401 GVVPN---------------------------------VLTYNTMISSACARSEEENALK 427
G +PN ++TYNT+IS+ + E AL
Sbjct: 542 GCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKMEEALD 601
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
LL+ M + PD TY L CR+ +L + +S DA Y ++ G
Sbjct: 602 LLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFC 661
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
++ + ++A F M+S G +P STY +L E L
Sbjct: 662 QNWRTDIAIDCFAHMVSSGCMPDESTYIILLEAL 695
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 180/380 (47%), Gaps = 13/380 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++D K+ + L+ EM + T + ++ + G D+A+ +
Sbjct: 200 YSILLDATCKASGYRQAMVLLDEM-RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDL 258
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
+G + D + ++ +L + ++F E C P FN ++ C+
Sbjct: 259 PSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAP-DEVTFNTIVTSLCQQGL 317
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT---LKEMQEKGCKPSVIT 338
VD A K + M + G PD+V+Y+ ++ C D +VDD L ++ GCKP I
Sbjct: 318 VDRAIKVVDHMSEHGCIPDIVTYSSILDGLC---DVGRVDDAVELLSRLKSYGCKPDTIA 374
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT V+ L +Q A ++ +M DC PD ++++I L + G V A ++ E M
Sbjct: 375 YTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMS 434
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ G P+++TYN++I C ++A++LL ++ CKPD T+ LLK C R +
Sbjct: 435 ENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWE 494
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
L+ +M +D DA T+ +++ L + G L A + M G +P STY ++
Sbjct: 495 DAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVV 554
Query: 519 EKLEKKRLGNAKERINKLLA 538
+ L K G +E + KLL+
Sbjct: 555 DALLKA--GKTQEAL-KLLS 571
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 154/324 (47%), Gaps = 5/324 (1%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
+++RL GGR DA F + G + +++ + +E A ++
Sbjct: 104 LIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGMP--F 158
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P + FN LI C +V DA +M +G SP VV+Y+ ++ C+ +R+
Sbjct: 159 PPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMV 218
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L EM+ KGC+P ++TY ++++A+ ++EAL + + S C PD Y+ ++ L
Sbjct: 219 LLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLC 278
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
+ R K+ E+F +M P+ +T+NT+++S C + + A+K++ M E C PD
Sbjct: 279 GSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIV 338
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY+ +L C R+ LL+ + D Y ++++GL + E A EM
Sbjct: 339 TYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEM 398
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRL 526
+ P T+ + L +K L
Sbjct: 399 VCSDCPPDEVTFNTVIASLCQKGL 422
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 169/368 (45%), Gaps = 7/368 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G T YNTMV+ ++ + L+ M + + T + ++R L GR D
Sbjct: 125 GASATVVTYNTMVNGYCRAGRIEDARRLISGMPFPPDTF----TFNPLIRALCVRGRVPD 180
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILI 273
A+ F M G S+L+D K + A + E K C P +N+LI
Sbjct: 181 ALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEP-DIVTYNVLI 239
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+ C VD+A + ++ G PD V+YT ++ C + +++V++ EM C
Sbjct: 240 NAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCA 299
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P +T+ ++ +L + ++ A+KV + M C+PD YSS++ L GRV DA E+
Sbjct: 300 PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVEL 359
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+K G P+ + Y T++ C+ + E+A +L+ +M C PD T+ ++ C+
Sbjct: 360 LSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQ 419
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
K + ++ M +N + D TY S++ GL ++ A + S G P T
Sbjct: 420 KGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVT 479
Query: 514 YKMLEEKL 521
+ L + L
Sbjct: 480 FNTLLKGL 487
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 139/287 (48%), Gaps = 7/287 (2%)
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
C+PL NILI C +V DA++ + G S VV+Y + YCR ++
Sbjct: 93 CLPLPVVPCNILIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAG---RI 146
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+D + + P T+ ++ AL ++ +AL V++ M C P YS L+
Sbjct: 147 EDARRLISGMPFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDA 206
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
KA + A + ++M+ +G P+++TYN +I++ C + + AL +L + CKPD
Sbjct: 207 TCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPD 266
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY P+LK C +R K + L M N + D T+ ++V L + G ++ A +
Sbjct: 267 AVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVD 326
Query: 501 EMISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
M G +P TY +L+ + R+ +A E +++L ++ + T
Sbjct: 327 HMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTI 373
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 162/354 (45%), Gaps = 36/354 (10%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + +++ L R+ + E F M D + ++ +L + V+ A KV
Sbjct: 269 TYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHM 328
Query: 259 KD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ CIP ++ ++ G C +VDDA + + + G PD ++YT ++ C +
Sbjct: 329 SEHGCIP-DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ 387
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ ++ + EM C P +T+ V+ +L + ++ A+KV E+M + C PD Y+S
Sbjct: 388 WEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNS 447
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L + DA E+ +++ G P+++T+NT++ C+ E+A +L+ M
Sbjct: 448 IIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSD 507
Query: 437 CKPDCETYAPLLKMCCRK-------KRMKVL------------NFLLTHMFK-------- 469
C PD T+ ++ C+K + +K++ N ++ + K
Sbjct: 508 CPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEAL 567
Query: 470 ------NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + D TY +++ + ++GK+E A M+S G+ P TY+ L
Sbjct: 568 KLLSGMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSL 621
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 146/312 (46%), Gaps = 5/312 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T +T++ L + G D A++ M + G D + ++D L ++ A ++ L
Sbjct: 409 TFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNL 468
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ C P FN L+ G C + +DA++ M M PD ++ I C++
Sbjct: 469 QSYGCKP-DIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGL 527
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ +TLK M E GC P+ TY IV+ AL KA + EALK+ M + PD Y++
Sbjct: 528 LLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNT 585
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I ++KAG++++A ++ M G+ P+ +TY ++ C + A+++L ++++
Sbjct: 586 VISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMG 645
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD Y +L C+ R + HM + D TY L+ L L+ A
Sbjct: 646 LSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAK 705
Query: 497 SFFEEMISKGIV 508
+ S G++
Sbjct: 706 QLLVNLCSLGVL 717
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/392 (25%), Positives = 190/392 (48%), Gaps = 7/392 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ GY Y+T+++ L K + +L+K+M+E ++ STI+ L +
Sbjct: 74 VKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEE-KGCKPNVVVYSTIIDSLCKDKL 132
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMD---TLVKGNSVEHAYKVFLEFKDCIPLSSQIF 269
+A+E M G+ + S ++ L + N +K +E ++ +P + F
Sbjct: 133 ITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE-RNVMP-DTVTF 190
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
NIL+ G K + +AQ + M ++G P+V +Y ++ YC + + M
Sbjct: 191 NILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVR 250
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
KGC PSV +Y I++ K+ +I+EA + +M PDT YS+L+ + GR +D
Sbjct: 251 KGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQD 310
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A ++ E+M+ G++P+++TY+ ++ C + + A +LL+ M+E +P+ Y L++
Sbjct: 311 AQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQ 370
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C +++ L +++F + D TY ++ GL++ G AC F +M G +P
Sbjct: 371 GMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLP 430
Query: 510 YHSTYKMLEEK-LEKKRLGNAKERINKLLAHA 540
TY ++ + L NA I +++
Sbjct: 431 NSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRG 462
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 163/315 (51%), Gaps = 11/315 (3%)
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF------KDCIPLSSQIF 269
A M K G++ + S L++ L + A K+F E D I S+
Sbjct: 31 AFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYST--- 87
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+I+G CK A + +K+M ++G P+VV Y+ I+ C++K + + L EM
Sbjct: 88 --IINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVN 145
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+G P+V+TY+ ++H + NEA ++++M + +PDT ++ L+ LSK G + +
Sbjct: 146 RGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILE 205
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A +FE M ++GV PNV TYN ++ C++S+ + A KL M C P +Y L+K
Sbjct: 206 AQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIK 265
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ R+ LL M ++ D TY++L++G + G+ + A EEM S G++P
Sbjct: 266 GHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLP 325
Query: 510 YHSTYKMLEEKLEKK 524
TY ++ + L K+
Sbjct: 326 DLMTYSIVLDGLCKQ 340
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 182/380 (47%), Gaps = 5/380 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++T+++ L K +L EM ++ GY + T STI+ L + G A++ +
Sbjct: 50 FSTLLNGLSSKAKIIDAVKLFDEMVKM--GYEPDVITYSTIINGLCKMGSTTMAIQLLKK 107
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
M++ G + + S ++D+L K + A + E + I + ++ ++HG+C +
Sbjct: 108 MEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGR 167
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++A K+M ++ PD V++ ++ +E + + M EKG +P+V TY
Sbjct: 168 SNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNA 227
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+M Q++EA K++ M C P Y+ LI K+GR+ +A + +M +
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+ +TY+T++ C ++A KLL++M PD TY+ +L C++ +
Sbjct: 288 LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAF 347
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL M ++ + + Y L++G+ GKLE A F + KGI P TY ++ L
Sbjct: 348 ELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGL 407
Query: 522 EKKRLGN-AKERINKLLAHA 540
K L N A E + H
Sbjct: 408 LKGGLSNEACELFRDMAVHG 427
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 103/419 (24%), Positives = 182/419 (43%), Gaps = 83/419 (19%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
+Y+T++D L K K E + EM +N G ++ T S+I+ GR ++A F+
Sbjct: 119 VYSTIIDSLCKDKLITEAMEFLSEM--VNRGISPNVVTYSSILHGFCNLGRSNEATSLFK 176
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-------------------------- 255
M + V DT ++L+D L K + A VF
Sbjct: 177 QMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQS 236
Query: 256 -----------LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+ K C P S + +NILI G CK+ ++D+A+ + EM + +PD V+Y
Sbjct: 237 QMDEAQKLFNIMVRKGCAP-SVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTY 295
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ ++ +C++ + L+EM+ G P ++TY+IV+ L K ++EA ++ + M+
Sbjct: 296 STLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQE 355
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
P+ Y+ LI + G+++ A E+F ++ +G+ P+V+TY MIS
Sbjct: 356 SKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNE 415
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A +L + M C P ++ TY +++
Sbjct: 416 ACELFRDMAVHGCLP-----------------------------------NSCTYNVIIQ 440
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
G + +G A EEM+ +G ST++ML + LE +++ I L H Q
Sbjct: 441 GFLRNGDTSNAGRLIEEMVGRGFSADSSTFQMLSD-LE------SRDEIISLFMHGSSQ 492
Score = 38.9 bits (89), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 2/132 (1%)
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEEN--ALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
M + P+V T +I+ C + + A +L M + +P+ T++ LL K
Sbjct: 1 MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ L M K D TY++++ GL + G +A ++M KG P Y
Sbjct: 61 AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120
Query: 515 KMLEEKLEKKRL 526
+ + L K +L
Sbjct: 121 STIIDSLCKDKL 132
>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
Length = 658
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/416 (26%), Positives = 189/416 (45%), Gaps = 41/416 (9%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMST 202
AF FF WA Q Y+H E Y +++DVL S F + + E E G++ ++ ++
Sbjct: 138 AFRFFWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKE--KGFLMTVFAANS 195
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
++R G ++ + +R MK+ G+E + L++ LV +E A +VF E +C
Sbjct: 196 LIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVF-EVMECG 254
Query: 263 PLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE----------- 309
+ + +N +I G+CK A + +M ++ PD ++Y I+
Sbjct: 255 KIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSC 314
Query: 310 -HYCRE---------------------KDFRKVDDT--LKEMQEKGCKPSVITYTIVMHA 345
H +E KD R V+ + + M +KGCK +V YT ++ A
Sbjct: 315 LHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDA 374
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
GK +NEA+ ++E+MK + PD Y ++ L K+GR+ +A E FE K V N
Sbjct: 375 YGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVN 434
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
+ Y+++I + A K ++M E C D Y L+ + +M+ L
Sbjct: 435 AMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFK 494
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M K TY L+ GL + + E A ++ MI KGI P ++++ L L
Sbjct: 495 RMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGL 550
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 110/242 (45%), Gaps = 7/242 (2%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFR 221
+Y ++D GK+ L + M G+ T I+ L + GR D+AVE F
Sbjct: 367 IYTALIDAYGKNGNVNEAINLFERMK--GEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFE 424
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKT 279
K V + S L+D L K V+ A K F E + C P S +N LI K+
Sbjct: 425 FCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGC-PQDSYCYNALIDALAKS 483
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
K+++A K M ++G V +YT I +E + M +KG P+ ++
Sbjct: 484 GKMEEALVLFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASF 543
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+ L + ++ A K+ +++ +P+T+F +I +L KAGR + A ++ + +
Sbjct: 544 RALSVGLCLSGKVARACKILDELAPMGVIPETAF-EDMINVLCKAGRTEQACKLADGIVD 602
Query: 400 QG 401
+G
Sbjct: 603 RG 604
>gi|297734042|emb|CBI15289.3| unnamed protein product [Vitis vinifera]
Length = 793
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 179/362 (49%), Gaps = 7/362 (1%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V+ +S+IL + P EAL+ + Q L++ D A GFF W K QTG
Sbjct: 326 VENVSRILRQLSWGP-AAEEALRNLNCLMDAYQANQVLKQI-QDHPVALGFFYWLKRQTG 383
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDD 215
+ H Y TMV +LG++++F + +L+ EM + +G ++ T + ++ R ++
Sbjct: 384 FKHDGHTYTTMVGILGRARQFGAINKLLAEM--VRDGCQPNVVTYNRLIHSYGRANYLNE 441
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIH 274
AV F M++ G + D L+D K ++ A ++ + ++ + + ++++I+
Sbjct: 442 AVSVFDRMQEAGCQPDRVTYCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIIN 501
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
K + A K EM QG P++V+Y I + +++ + ++MQ G +P
Sbjct: 502 CLGKAGHLTSAHKLFCEMVDQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQP 561
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+TY+IVM LG + EA ++ +MK + +PD Y L+ + K G V+ + E +
Sbjct: 562 DKVTYSIVMEVLGHCGHLEEAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWY 621
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ M G+ PNV T N+++S+ +A LLQ M +P +TY LL CC +
Sbjct: 622 QAMLNAGLCPNVPTCNSLLSAFLRVHRLSDAYNLLQSMLRLGLQPSLQTYTLLLS-CCTE 680
Query: 455 KR 456
R
Sbjct: 681 AR 682
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 148/320 (46%), Gaps = 9/320 (2%)
Query: 227 GVEKDTRALSVLMDTL--------VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCK 278
E+ R L+ LMD ++ + V + +L+ + + ++ +
Sbjct: 341 AAEEALRNLNCLMDAYQANQVLKQIQDHPVALGFFYWLKRQTGFKHDGHTYTTMVGILGR 400
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R+ K + EM + G P+VV+Y I Y R + MQE GC+P +T
Sbjct: 401 ARQFGAINKLLAEMVRDGCQPNVVTYNRLIHSYGRANYLNEAVSVFDRMQEAGCQPDRVT 460
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ KA ++ AL +Y+KM+ PDT YS +I L KAG + A+++F +M
Sbjct: 461 YCTLIDIHAKAGFLDVALHMYQKMQEAHLSPDTFTYSVIINCLGKAGHLTSAHKLFCEMV 520
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
QG VPN++TYN MI+ AL+L + M+ +PD TY+ ++++ ++
Sbjct: 521 DQGCVPNLVTYNIMIALQAKARNYPTALELYRDMQNAGFQPDKVTYSIVMEVLGHCGHLE 580
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST-YKML 517
+ T M + + D Y LV + G +E + +++ M++ G+ P T +L
Sbjct: 581 EAEAIFTEMKRKNWVPDEPVYGLLVDLWGKVGNVEKSWEWYQAMLNAGLCPNVPTCNSLL 640
Query: 518 EEKLEKKRLGNAKERINKLL 537
L RL +A + +L
Sbjct: 641 SAFLRVHRLSDAYNLLQSML 660
>gi|356557957|ref|XP_003547276.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At5g43820-like [Glycine max]
Length = 505
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/396 (27%), Positives = 173/396 (43%), Gaps = 4/396 (1%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A ++ + Y+ +V LG+ K F M + + +M N L +S ++ VR
Sbjct: 100 AAIESALSNVAVXYHVIVKALGRRKFFDFMMDALCDMRR-NAIDGDLFMLSVVVDSFVRA 158
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
G A++ F + GV +DT AL+VL+ L + + V A V K + +N
Sbjct: 159 GHVSRAIQVFGNLDDLGVRRDTEALNVLLLCLCRRSHVGAANSVLNSMKGKVDFDVGTYN 218
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+ GW + +V + ++ M+EM G PD ++ IE RE + + L M+E
Sbjct: 219 AVAGGWSRFGRVSEVERVMREMEADGLRPDCRTFGFLIEGLGREGRMDEAVEILCGMKEM 278
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
C+P TY V+ E +K Y +M SD+C P+ Y+ +I +A +V DA
Sbjct: 279 NCQPDTETYNAVIFNFVSVGDFEECIKYYNRMLSDNCEPNLDTYARMINRFLRARKVADA 338
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+F++M ++GVVP+ T T I C+ AL + +K + C E Y LL
Sbjct: 339 LLMFDEMLRRGVVPSTGTITTFIKRLCSYGPPYAALMIYKKARKLGCVISMEAYKILLMR 398
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
+ L + M + S D Y ++ GL G+LE A EE + KG P
Sbjct: 399 LSMVGKCGTLLSIWEEMQECGYSSDLEVYECIISGLCNVGQLENAVLVMEEALRKGFCPS 458
Query: 511 HSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
Y L +L + ER KL K ++
Sbjct: 459 RLVYSKLSNRLLAS---DKSERAYKLFLKIKXARSL 491
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 76/181 (41%), Gaps = 3/181 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T + ++ R +R + DA+ F M + GV T ++ + L A ++
Sbjct: 318 NLDTYARMINRFLRARKVADALLMFDEMLRRGVVPSTGTITTFIKRLCSYGPPYAALMIY 377
Query: 256 LEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ + C+ +S + + IL+ K +EM + G+S D+ Y C I C
Sbjct: 378 KKARKLGCV-ISMEAYKILLMRLSMVGKCGTLLSIWEEMQECGYSSDLEVYECIISGLCN 436
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
++E KG PS + Y+ + + L + + A K++ K+K L +
Sbjct: 437 VGQLENAVLVMEEALRKGFCPSRLVYSKLSNRLLASDKSERAYKLFLKIKXARSLENAKK 496
Query: 374 Y 374
Y
Sbjct: 497 Y 497
Score = 39.3 bits (90), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 53/228 (23%), Positives = 95/228 (41%), Gaps = 17/228 (7%)
Query: 60 PDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALK 119
PD + + +V E + +R+LS+N E ++D ++++++ + KV +AL
Sbjct: 282 PDTETYNAVIFNFVSVGDFEECIKYYNRMLSDNCEPNLDTYARMINR-FLRARKVADALL 340
Query: 120 GC------GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ-TGYMHTPEMYNTM---VD 169
GV S + ++R + P + K + G + + E Y + +
Sbjct: 341 MFDEMLRRGVVPSTGTITTFIKRLCSYGPPYAALMIYKKARKLGCVISMEAYKILLMRLS 400
Query: 170 VLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV 228
++GK +WE EM E GY S L I+ L G+ ++AV + G
Sbjct: 401 MVGKCGTLLSIWE---EMQEC--GYSSDLEVYECIISGLCNVGQLENAVLVMEEALRKGF 455
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
S L + L+ + E AYK+FL+ K L + +GW
Sbjct: 456 CPSRLVYSKLSNRLLASDKSERAYKLFLKIKXARSLENAKKYWRSNGW 503
>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
Length = 855
Score = 155 bits (393), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 180/366 (49%), Gaps = 11/366 (3%)
Query: 164 YNTMVDVLGKSKKF---CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
Y T++ L SK+ C ++E +K N + + ++ L++ GR +D ++ F
Sbjct: 366 YTTVIKGLADSKRIDEACELFEKLKTAGCSPN----VVAYTAVIDGLLKAGRIEDGLKNF 421
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCK 278
M +V++D L K + A KVF + K C+P + + LI G+ K
Sbjct: 422 EDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVP-DTITYTTLIDGFSK 480
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
K+D+A+K + M +G P V+Y + +C+ + + + +M+E+GC+P +
Sbjct: 481 ASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFI 540
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+T ++ + EA +V +M + C PD Y+SLI +L GRV +A +F+ M
Sbjct: 541 FTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMI 600
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++G P+ LTY T+I + E A ++L+ M + PDC Y L+ + +R+
Sbjct: 601 EKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVD 660
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG-IVPYHSTYKML 517
+ M + + +A T+ L+ GL + GK + A S F+EM+ K + P +Y +L
Sbjct: 661 QAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTIL 720
Query: 518 EEKLEK 523
+ L K
Sbjct: 721 IDGLGK 726
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 189/382 (49%), Gaps = 16/382 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+++D K + +L+ +M E +N + + T + ++ R R DDA+E F+ +
Sbjct: 267 YNSLMDGYCKLGRVDDGLKLLLQMVECDN-FPDIQTYNILVAGFSRANRLDDALELFKLL 325
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
YG + + + ++ L +E A F E D I + +I G ++++D
Sbjct: 326 SSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALDVIS-----YTTVIKGLADSKRID 380
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKPSVITYT 340
+A + +++ G SP+VV+YT I+ + +++D LK +M C P+ TYT
Sbjct: 381 EACELFEKLKTAGCSPNVVAYTAVIDGLLKAG---RIEDGLKNFEDMSGSSCVPTRTTYT 437
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+V+ L KA+ + +A KV+E+M C+PDT Y++LI SKA ++ +A ++ + M +
Sbjct: 438 VVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTK 497
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P +TY +++ C A +++ +M E C+P + LL K R +
Sbjct: 498 GPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEA 557
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+LT M + D Y SL+ L +G++ A F+ MI KG P TY + +
Sbjct: 558 YQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQN 617
Query: 521 LEKKRLGN--AKERINKLLAHA 540
K +GN A I +L+A +
Sbjct: 618 FSK--IGNVEAAGEILELMAKS 637
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 99/382 (25%), Positives = 180/382 (47%), Gaps = 6/382 (1%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
TG M N +++ L K++K EL EM + ++ + +T++ L + D
Sbjct: 14 TGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGC-EPTIVSYNTVISGLASIDKMD 72
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
+A + F M G E D A + L+ K + + + + ++ +IH
Sbjct: 73 EAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFRPDVFLYTSVIH 132
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+CK +D K ++EM G PD +Y I+ C+ + + + M++ GC
Sbjct: 133 GYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLG 192
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+T+ ++ AL +++EA ++Y +M P SLIF L KAG+V +ANEI+
Sbjct: 193 DYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIY 252
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ + + V + + YN+++ C ++ LKLL +M E PD +TY L+ R
Sbjct: 253 QTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRA 312
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
R+ L + +A TY ++++GL ++ ++E A +FF+E + ++ Y +
Sbjct: 313 NRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEALD--VISYTTVI 370
Query: 515 KMLEEKLEKKRLGNAKERINKL 536
K L + KR+ A E KL
Sbjct: 371 KGLA---DSKRIDEACELFEKL 389
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 168/369 (45%), Gaps = 7/369 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGG 211
Q G + Y T++D K+ K +L+ M L G A T +I+ +
Sbjct: 460 VQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM--LTKGPEPTAVTYGSIVHGFCKLD 517
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIF 269
++A E M++ G E + L+ + E AY+V E + C P ++
Sbjct: 518 MINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAP-DVILY 576
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
LI T +V +A+ M ++G +PD ++Y I+++ + + + L+ M +
Sbjct: 577 TSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 636
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
G P Y +M K +++++A VY++M + P+ ++ L+ L K G+
Sbjct: 637 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 696
Query: 390 ANEIFEDM-KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
A +F++M +K V P +++Y +I A Q+M + P+C TY L+
Sbjct: 697 AFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLI 756
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ R+ L+ M K V+ D Y++L+ GLI+S ++ A F+EM+ +G
Sbjct: 757 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 816
Query: 509 PYHSTYKML 517
P TYK+L
Sbjct: 817 PNEVTYKVL 825
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/280 (28%), Positives = 137/280 (48%), Gaps = 3/280 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFK 259
++++ L GR +A F M + G D ++ K +VE A ++ L K
Sbjct: 577 TSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAK 636
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ +N L+ G+ K +VD A M G P+ V++ + ++ +
Sbjct: 637 SGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDR 696
Query: 320 VDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
KEM EK P++++YTI++ LGKA +++EA +++M +P+ Y+SLI
Sbjct: 697 AFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLI 756
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ L+KAGR+ +A ++ EDM K GV P+V Y+ +I+ S + A + Q+M + C
Sbjct: 757 YSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCA 816
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
P+ TY L + R L + H F V+M+AG+
Sbjct: 817 PNEVTYKVLRRGFRAAGRALDLEAVKQH-FSQGVAMEAGS 855
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 111/229 (48%), Gaps = 1/229 (0%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+++A +KEM G PDVV+ + C+ + K + EM GC+P++++Y
Sbjct: 1 MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ L +++EA K + M + C PD +++LI KAG+ + + + K+
Sbjct: 61 VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKR- 119
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+V Y ++I C + + K+L++M C PD Y L+ C+ R+
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
L M K+ D T+ +L+ L GKL+ AC + EMI +G PY
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPY 228
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 118/440 (26%), Positives = 206/440 (46%), Gaps = 46/440 (10%)
Query: 149 TWAKTQTGYMHTPEMYNTMVDVLGKS---KKFCLMWELVKEMDELNNGYVS--LATMSTI 203
TW T+ M E + DV+ + +C E+ + L+ VS + T +TI
Sbjct: 161 TWKATRV--MEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTI 218
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--C 261
+R L G+ +A+E + D ++L++ K + V A K+ E +D C
Sbjct: 219 LRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGC 278
Query: 262 IPLSSQIFNILIHGWCKTRKVD-----------------------------------DAQ 286
P +N+LI+G CK ++D DA+
Sbjct: 279 KP-DVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAE 337
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
K + EM ++G SP VV++ I CR+ + D L++M + GC P+ ++Y ++HAL
Sbjct: 338 KFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHAL 397
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
K K++ A++ + M S C PD Y++L+ L K G+V A EI + +G P +
Sbjct: 398 CKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVL 457
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+TYNT+I + ++A+KLL +M+ KPD TY+ L+ R+ ++
Sbjct: 458 ITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHD 517
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
+ + V +A TY S++ GL ++ + A F M+++G P ++Y +L E L + L
Sbjct: 518 LEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGL 577
Query: 527 G-NAKERINKLLAHAKEQKT 545
A E +N+L + +K+
Sbjct: 578 AKEALELLNELCSRGVVKKS 597
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 166/353 (47%), Gaps = 33/353 (9%)
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
+RRLVR G ++ + M G D A + L+ L K A +V +D
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176
Query: 264 LSSQI-FNILIHGWCKTRKVDDAQKAMKEM------------------------------ 292
+ I +N+LI G+CKT ++ A + + M
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236
Query: 293 --FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
Q+ PDV++YT IE C+E + L EM++KGCKP V+TY ++++ + K
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
+++EA++ M S C P+ ++ ++ + GR DA + +M ++G P+V+T+N
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I+ C + A+ +L+KM + C P+ +Y PLL C+ K+M+ L M
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
D TY +L+ L + GK+++A ++ SKG P TY + + L K
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSK 469
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 134/264 (50%), Gaps = 4/264 (1%)
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ ++++ K +++M +G PD+++ T I C+ K ++ +++ G P VI
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY +++ K +I AL++ ++M PD Y++++ L +G++K+A E+ +
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
++ P+V+TY +I + C S A+KLL +M + CKPD TY L+ C++ R+
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L HM + T+ ++R + +G+ A F EMI KG P T+ +L
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNIL 358
Query: 518 EEKLEKKRL-GNAKERINKLLAHA 540
L +K L G A + + K+ H
Sbjct: 359 INFLCRKGLIGRAIDVLEKMPQHG 382
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 78/157 (49%), Gaps = 4/157 (2%)
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L + G +++ + EDM +G +P+++ ++I C + A ++++ +E+ PD
Sbjct: 120 LVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPD 179
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ C+ + LL M VS D TY +++R L +SGKL+ A +
Sbjct: 180 VITYNVLISGYCKTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236
Query: 501 EMISKGIVPYHSTYKML-EEKLEKKRLGNAKERINKL 536
+ + P TY +L E ++ +G A + ++++
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEM 273
>gi|115489794|ref|NP_001067384.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|77556813|gb|ABA99609.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113649891|dbj|BAF30403.1| Os12g0638900 [Oryza sativa Japonica Group]
gi|125580213|gb|EAZ21359.1| hypothetical protein OsJ_37016 [Oryza sativa Japonica Group]
Length = 859
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 165/323 (51%), Gaps = 6/323 (1%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
+D T A GFF W K Q G+ H Y TM+ +LG++++F M +L+ EM+ ++ ++
Sbjct: 344 HDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHC-KPTVV 402
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + I+ R +AV+ F M+K G E D L+D KG +E A ++
Sbjct: 403 TYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRM 462
Query: 259 KDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
++ + LS F + +++ K + A K EM + G +P++V+Y I + ++
Sbjct: 463 QE-VGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARN 521
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ V K+MQ G +P ITY+IVM LG ++EA V+ +M+ D PD Y
Sbjct: 522 YENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-HDWAPDEPVYGL 580
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ + KAG V A + M + G+ PNV T N+++S+ + ++A +LQ M
Sbjct: 581 LVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQG 640
Query: 437 CKPDCETYAPLLKMCCRKKRMKV 459
P +TY LL CC + + ++
Sbjct: 641 LVPSLQTYTLLLS-CCTEAQAQM 662
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 124/264 (46%), Gaps = 2/264 (0%)
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ R+ +K + EM P VV+Y I Y R R+ +EMQ+ G +P +
Sbjct: 378 QARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRV 437
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++ K + A+ +Y +M+ PDT YS+++ L K G + A ++F +M
Sbjct: 438 TYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEM 497
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ G PN++TYN MI+ EN +KL + M+ +PD TY+ ++++ +
Sbjct: 498 VENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHL 557
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST-YKM 516
+ M ++D + D Y LV ++G ++ A ++ M+ G+ P T +
Sbjct: 558 DEAEAVFIEM-RHDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSL 616
Query: 517 LEEKLEKKRLGNAKERINKLLAHA 540
L L+ R +A + +LA
Sbjct: 617 LSAFLKINRFQDAYSVLQNMLAQG 640
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q GF D SYT I + + F + L EM CKP+V+TY ++HA G+A +
Sbjct: 359 QPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLR 418
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EA+KV+E+M+ PD Y +LI I +K G ++ A +++ M++ G+ P+ TY+ M+
Sbjct: 419 EAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAMV 478
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ A KL +M E+ C P+ TY ++ + + + + + L M
Sbjct: 479 NCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFR 538
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEM 502
D TY+ ++ L G L+ A + F EM
Sbjct: 539 PDKITYSIVMEVLGHCGHLDEAEAVFIEM 567
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 148/308 (48%), Gaps = 11/308 (3%)
Query: 216 AVEAFRGMKKY-GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNIL 272
A+ F+ +K+ G + D + + ++ L + K+ E C P + +N +
Sbjct: 349 ALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKP-TVVTYNRI 407
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
IH + + + +A K +EM + G+ PD V+Y I+ + + D MQE G
Sbjct: 408 IHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGL 467
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P TY+ +++ LGK + A K++ +M + C P+ Y+ +I + +KA ++ +
Sbjct: 468 SPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVK 527
Query: 393 IFEDMKKQGVVPNVLTYNTMIS--SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+++DM+ G P+ +TY+ ++ C +E A+ + +M D PD Y L+ +
Sbjct: 528 LYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFI--EMRHDWA-PDEPVYGLLVDL 584
Query: 451 CCRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ + K L + M ++ + + T SL+ ++ + + A S + M+++G+VP
Sbjct: 585 WGKAGNVDKALGWYHA-MLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVP 643
Query: 510 YHSTYKML 517
TY +L
Sbjct: 644 SLQTYTLL 651
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%)
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++ G K +YT ++ LG+A+Q K+ ++M S C P Y+ +I +A +
Sbjct: 358 RQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYL 417
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
++A ++FE+M+K G P+ +TY T+I E A+ L +M+E PD TY+ +
Sbjct: 418 REAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDTFTYSAM 477
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + + L M +N + + TY ++ ++ E +++M G
Sbjct: 478 VNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGF 537
Query: 508 VPYHSTYKMLEEKL 521
P TY ++ E L
Sbjct: 538 RPDKITYSIVMEVL 551
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 113/275 (41%), Gaps = 34/275 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ MV+ LGK ++L EM E N +L T + ++ + Y++ V+ ++ M
Sbjct: 474 YSAMVNCLGKGGHLAAAYKLFCEMVE-NGCTPNLVTYNIMIALQAKARNYENVVKLYKDM 532
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
+ G D S++M+ L ++ A VF+E + ++ +L+ W K VD
Sbjct: 533 QVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPDEPVYGLLVDLWGKAGNVD 592
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A M Q G P+V + + + + F+ L+ M +G PS+ TYT+++
Sbjct: 593 KALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLL 652
Query: 344 HALGKAK--------------------------------QINEALKVY-EKMKSDDCLPD 370
+A+ + + + + + M S+D
Sbjct: 653 SCCTEAQAQMGLCCQLMAITGHPAHMFLLYLPDAEPGGQNVRDHTRYFLDMMHSEDRESK 712
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
++I L K+G ++A I+E ++ V P+
Sbjct: 713 RGLMDAVIDFLHKSGLKEEAGFIWEVAAQRNVYPD 747
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 53/132 (40%), Gaps = 1/132 (0%)
Query: 393 IFEDMKKQ-GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
F+ +K+Q G + +Y TMI + KLL +M CKP TY ++
Sbjct: 352 FFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAY 411
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
R ++ + M K D TY +L+ + G LE A + M G+ P
Sbjct: 412 GRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEFAMDLYTRMQEVGLSPDT 471
Query: 512 STYKMLEEKLEK 523
TY + L K
Sbjct: 472 FTYSAMVNCLGK 483
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 186/369 (50%), Gaps = 4/369 (1%)
Query: 159 HTPEMY--NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
H P++ NT+V+ L S K L+ +M E + T ++ + + G+ A
Sbjct: 189 HKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG-CQPNAVTYGPVLNVMCKSGQTALA 247
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHG 275
+E R M++ ++ D S+++D L K S+++A+ +F E + I + +NILI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+C + DD K +++M ++ +P+VV+++ I+ + +E R+ ++ KEM +G P
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
ITYT ++ K +++A ++ + M S C P+ ++ LI KA R+ D E+F
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M +GVV + +TYNT+I C + A +L Q+M P+ TY LL C
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ + + K+ + +D G Y ++ G+ + K++ A F + KG+ P TY
Sbjct: 488 ESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYN 547
Query: 516 MLEEKLEKK 524
++ L KK
Sbjct: 548 IMIGGLCKK 556
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 132/256 (51%), Gaps = 3/256 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV- 254
++ T S ++ V+ G+ +A E + M G+ DT + L+D K N ++ A ++
Sbjct: 332 NVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMV 391
Query: 255 -FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ K C P + + FNILI+G+CK ++DD + ++M +G D V+Y I+ +C
Sbjct: 392 DLMVSKGCDP-NIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCE 450
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ +EM + P+++TY I++ L + +AL+++EK++ D
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGI 510
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ +I + A +V DA ++F + +GV P V TYN MI C + A L +KME
Sbjct: 511 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKME 570
Query: 434 EDLCKPDCETYAPLLK 449
ED PD TY L++
Sbjct: 571 EDGHAPDGWTYNILIR 586
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 165/367 (44%), Gaps = 8/367 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++D L K + L EM E+ ++ T + ++ GR+DD + R M
Sbjct: 266 YSIIIDGLCKHGSLDNAFNLFNEM-EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDM 324
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
K + + SVL+D+ VK + A ++ E I + + LI G+CK +
Sbjct: 325 IKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHL 384
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSVITY 339
D A + + M +G P++ ++ I YC+ ++DD L ++M +G +TY
Sbjct: 385 DKANQMVDLMVSKGCDPNIRTFNILINGYCKAN---RIDDGLELFRKMSLRGVVADTVTY 441
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ + ++N A +++++M S P+ Y L+ L G + A EIFE ++K
Sbjct: 442 NTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEK 501
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+ ++ YN +I C S+ ++A L + KP +TY ++ C+K +
Sbjct: 502 SKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSE 561
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L M ++ + D TY L+R + G + EE+ G ST KM+ +
Sbjct: 562 AELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Query: 520 KLEKKRL 526
L RL
Sbjct: 622 MLSDGRL 628
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 122/237 (51%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA ++M P V+ ++ + K + V K+M+ KG ++ T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + +++ A K+ P+T +S+LI L GRV +A E+ + M +
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+++T NT+++ C +E A+ L+ KM E C+P+ TY P+L + C+ + +
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + ++ +DA Y+ ++ GL + G L+ A + F EM KGI TY +L
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNIL 304
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 153/336 (45%), Gaps = 17/336 (5%)
Query: 193 GYVSLATMSTIMRRLVRGG----RYDDAVEAFRGMKKYGVEKDTRALSVLMD--TLVKGN 246
G+ + + + R +R G + DDA++ FR M +R L ++D L
Sbjct: 45 GFSAFSDRNLSYRERLRSGLVDIKADDAIDLFRDMIH------SRPLPTVIDFSRLFSAI 98
Query: 247 SVEHAYKVFLEFKDCIPLSSQIFN-----ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
+ Y + L + L N I+I+ +C+ RK+ A AM ++ + G+ P+
Sbjct: 99 AKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNT 158
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
++++ I C E + + + M E G KP +IT +++ L + + EA+ + +K
Sbjct: 159 ITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDK 218
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M C P+ Y ++ ++ K+G+ A E+ M+++ + + + Y+ +I C
Sbjct: 219 MVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGS 278
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
+NA L +ME + TY L+ C R LL M K ++ + T++
Sbjct: 279 LDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L+ ++ GKL A +EMI +GI P TY L
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSL 374
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 137/286 (47%), Gaps = 4/286 (1%)
Query: 258 FKDCI---PLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
F+D I PL + I F+ L KT++ D K+M +G + ++ + + I +CR
Sbjct: 76 FRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCR 135
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + ++ + G +P+ IT++ +++ L +++EAL++ ++M PD
Sbjct: 136 CRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLIT 195
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
++L+ L +G+ +A + + M + G PN +TY +++ C + A++LL+KME
Sbjct: 196 INTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E K D Y+ ++ C+ + L M ++ + TY L+ G +G+ +
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWD 315
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
+MI + I P T+ +L + K+ E ++K + H
Sbjct: 316 DGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 181/363 (49%), Gaps = 8/363 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ + ++++EM E + T T++ + GR D+AV+ F M
Sbjct: 522 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 581
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-----CIPLSSQIFNILIHGWCK 278
G + + +V+ + L+ G + L ++D + ++ +N+L+H
Sbjct: 582 LTKG---EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 638
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ +A + ++EM +G +PDV +Y I +C+E + +K + + M +G + +V+T
Sbjct: 639 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 698
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT +++AL K Q+ E K++++ PD Y++LI S +G + A EI +M+
Sbjct: 699 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 758
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
K+ + P+ +TYNT++ C + A KL+ +M E +PD TY L+ K +K
Sbjct: 759 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 818
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
+ M + TY +L++GL ++G+ + A + +EM+ GI P STY L
Sbjct: 819 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 878
Query: 519 EKL 521
E L
Sbjct: 879 EGL 881
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 179/375 (47%), Gaps = 8/375 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N M+ L + K EL+++M N T +T++ GR A++ R M
Sbjct: 491 FNIMLRHLCSAGKPARALELLRQMPRPN-----AVTYNTVIAGFCSRGRVQAALDIMREM 545
Query: 224 K-KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
+ + G+ + ++ K V+ A KVF E K + + ++N LI G+C
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 605
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+D A M ++G + V +Y + + + + ++EM KG P V TY
Sbjct: 606 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 665
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ K + +AL+++E M Y++LI+ LSK G+V++ +++F++ ++
Sbjct: 666 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 725
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+++ YN +I+S + A +++ +ME+ PD TY L++ C R+
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 785
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L+ M + + D TY +L+ G G ++ A EM++KG P TY L +
Sbjct: 786 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 845
Query: 521 LEKKRLGNAKERINK 535
L K G+ E + K
Sbjct: 846 LCKNGQGDDAENMVK 860
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 141/298 (47%), Gaps = 11/298 (3%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
MK + T +L L+ L A+ +F + F+ +PL + FNI++ C K
Sbjct: 448 MKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGK 503
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GCKPSVITYT 340
A + +++M + P+ V+Y I +C + D ++EM+E+ G P+ TY
Sbjct: 504 PARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 559
Query: 341 IVMHALGKAKQINEALKVYEKMKS-DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
V+ K +++EA+KV+++M + + P+ Y++LI G++ A + M +
Sbjct: 560 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 619
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+GV V TYN ++ + A +L+++M PD TY L+ C++ +K
Sbjct: 620 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 679
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ +M + V TY +L+ L + G+++ F+E + +GI P Y L
Sbjct: 680 ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 737
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 18/281 (6%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG--- 210
+ G T YN +V L + +ELV+EM G LA L+ G
Sbjct: 619 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM-----GGKGLAPDVFTYNILINGHCK 673
Query: 211 -GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQI 268
G A+E F M + GV + L+ L K V+ K+F E + I +
Sbjct: 674 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 733
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC---REKDFRKVDDTLK 325
+N LI+ + +D A + M EM ++ +PD V+Y + C R + RK+ D
Sbjct: 734 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID--- 790
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM E+G +P ++TY ++ + +AL++ +M + P Y++LI L K G
Sbjct: 791 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 850
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+ DA + ++M + G+ P+ TY ++I +E+E A+
Sbjct: 851 QGDDAENMVKEMVENGITPDDSTYISLIEGLT--TEDERAI 889
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YN +++ S +E++ EM++ + T +T+MR L GR D+A +
Sbjct: 733 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV-TYNTLMRGLCLLGRVDEARKLIDE 791
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-----CIPLSSQIFNILIHGWC 277
M + G++ D V +TL+ G S++ K L ++ + +N LI G C
Sbjct: 792 MTERGIQPDL----VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 847
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
K + DDA+ +KEM + G +PD +Y IE E D R +DD
Sbjct: 848 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE-DERAIDD 891
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
+L++Y +MKS T+ L+ L A A +F DM + + T+N M+
Sbjct: 441 SLRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLR 496
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK-VLNFLLTHMFKNDVS 473
C+ + AL+LL++M +P+ TY ++ C + R++ L+ + + ++
Sbjct: 497 HLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIA 552
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ TY +++ G + G+++ A F+EM++KG V
Sbjct: 553 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 587
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 182/364 (50%), Gaps = 3/364 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMD--ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
+N +V+ L K K +++++M ++ ++ T+ ++ R G+ A +
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILK 217
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTR 280
M G+ + ++L+D K +V A +VF E + + + +NILI+G C
Sbjct: 218 EMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDG 277
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
KVD+A +M P+VV++ I +C+ K + + +M+++G P+ +TYT
Sbjct: 278 KVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYT 337
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ A K ++ +A +Y M P+ S Y+ LI L + G VK A + +M +
Sbjct: 338 TLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK 397
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ +V+TYN +I S C + E A+KLL +M E P TY L+ CR+ ++
Sbjct: 398 KLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAA 457
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+ T M + + T+ L++G G+LE A EM+ +G+VP +TY++++E+
Sbjct: 458 LIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEE 517
Query: 521 LEKK 524
+ +K
Sbjct: 518 MMEK 521
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 189/429 (44%), Gaps = 60/429 (13%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI--- 203
+FTW++ + H+ E+ +++ L +KK+ + + + + Y A I
Sbjct: 18 YFTWSQKEFKLSHSLELTFRILNSLAHTKKYSKIRSFLDKFVKYEKDYSVSAIFHAISMS 77
Query: 204 --------------MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK---GN 246
+ VR + EAF+ YG + + + L+ LVK
Sbjct: 78 GDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENG 137
Query: 247 SVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
+E Y+ ++ K I L+ FNI+++G CK K++ A +++M G SP+V++Y
Sbjct: 138 DMEFVYREMIKRK--IELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNT 195
Query: 307 FIEHYC---REKDFRKVDDTLK-----------------------------------EMQ 328
I+ YC R K D LK EMQ
Sbjct: 196 LIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQ 255
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+G +P+V+TY I+++ L +++EA+ + ++M S D P+ ++ LI K V
Sbjct: 256 RQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVN 315
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A +F DM+KQGV PN +TY T+I + C E+A L M + P+ TY L+
Sbjct: 316 EAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLI 375
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
CRK +K L+ M +S D TY L+ L + G+ A +EM KG+
Sbjct: 376 AGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLN 435
Query: 509 PYHSTYKML 517
P H TY L
Sbjct: 436 PSHVTYNTL 444
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 161/352 (45%), Gaps = 25/352 (7%)
Query: 164 YNTMVDVLGKSKKFCLMWE---LVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEA 219
YNT++D K + M++ ++KEM + G + T + ++ + A+
Sbjct: 193 YNTLIDGYCKMGRIGKMYKADAILKEM--VAKGICPNEVTYNILIDGFCKDENVSGAMRV 250
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWC 277
F M++ G+ + ++L++ L V+ A + + D P + N+LI+G+C
Sbjct: 251 FGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEP-NVVTHNVLINGFC 309
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K + V++A +M +QG P+ ++YT I+ YC++ M ++G P V
Sbjct: 310 KNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVS 369
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++ L + + A + +M S D Y+ LI L K G + A ++ ++M
Sbjct: 370 TYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEM 429
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
++G+ P+ +TYNT++ C AL + +ME + + T+ L+K C K R+
Sbjct: 430 FEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRL 489
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ N LL M + + + TY + EEM+ KG VP
Sbjct: 490 EDANGLLNEMLERGLVPNRTTYEIIK----------------EEMMEKGFVP 525
>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
Length = 667
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 163/327 (49%), Gaps = 3/327 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++++ R + D A + F M G +D + + L++ L + ++ A ++F E
Sbjct: 12 TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEM 71
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
P ++ L+ G C + ++ ++ M + G+ P +Y ++ CRE+ +
Sbjct: 72 DQ--P-DMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAK 128
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ ++ L+EM EKG P V+T T V++A K ++++AL+V E MK C P+ Y++L+
Sbjct: 129 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 188
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
G+V A + M+ GV P+ +TYN +I C E+A +LL+ ME D
Sbjct: 189 QGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 248
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
D TY L+ C+ R L + + +A T+ SL+ GL +SGK ++A F
Sbjct: 249 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKF 308
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKR 525
E+M+S G P TY E L K +
Sbjct: 309 LEKMVSAGCTPDTYTYSSFIEHLCKMK 335
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 98/334 (29%), Positives = 161/334 (48%), Gaps = 24/334 (7%)
Query: 207 LVRG----GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKD 260
L+RG G + A R M+ G+ D + L++ L K + A +F LE +
Sbjct: 222 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 281
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P ++ FN LI+G CK+ K D A K +++M G +PD +Y+ FIEH C+ K ++
Sbjct: 282 IKP-NAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG 340
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+ EM +K KPS + YTIV+H L K + + + +M S C PD Y++ +
Sbjct: 341 LSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRA 400
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
GR+ +A + +M K GV + + YNT++ + + ++A+ +L++M P+
Sbjct: 401 YCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPN 460
Query: 441 CETYAPLLKMCCRKKRMK-VLNFL---------LTHMF-------KNDVSMDAGTYASLV 483
TY LL+ R + ++ VL LT +F KN+ ++GTY+S++
Sbjct: 461 QFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSIL 520
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
G E G+ E A S M I Y L
Sbjct: 521 EGFSEDGRTEEATSLVSLMKEDSISLNEDIYTAL 554
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/360 (24%), Positives = 167/360 (46%), Gaps = 6/360 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ Y T+++ L ++ + EL EMD+ + + + +++ L R ++
Sbjct: 40 GFAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPD-----MHMYAALVKGLCNAERGEE 94
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIH 274
+ R MK+ G TRA + ++D + + A ++ E F+ + +I+
Sbjct: 95 GLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVIN 154
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
+CK ++ DA + ++ M +G P+V +Y ++ +C E K L +M+ G P
Sbjct: 155 AYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNP 214
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+TY +++ I A ++ M+ D + D Y++LI L K GR A +F
Sbjct: 215 DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLF 274
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ ++ +G+ PN +T+N++I+ C + + A K L+KM C PD TY+ ++ C+
Sbjct: 275 DSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKM 334
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
K + + M + DV Y ++ L++ L + EM+S G P TY
Sbjct: 335 KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 394
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 154/330 (46%), Gaps = 5/330 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ + +T++ L GR D+AVE F M + D + L+ L E +
Sbjct: 45 VVSYATLIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLR 100
Query: 257 EFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
K+ S++ + ++ C+ RK +A++ ++EMF++G +P VV+ T I YC+E
Sbjct: 101 RMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEG 160
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
L+ M+ +GCKP+V TY ++ ++++A+ + KM++ PD Y+
Sbjct: 161 RMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYN 220
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
LI G ++ A + M+ G++ + TYN +I++ C + A L +E
Sbjct: 221 LLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETR 280
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
KP+ T+ L+ C+ + + L M + D TY+S + L + +
Sbjct: 281 GIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEG 340
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
SF EM+ K + P Y ++ KL K+R
Sbjct: 341 LSFIGEMLQKDVKPSTVNYTIVIHKLLKER 370
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 163/375 (43%), Gaps = 4/375 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGR 212
+ G+ + Y +VD + +K E+++EM E G + T + ++ + GR
Sbjct: 104 ELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFE--KGLAPCVVTCTAVINAYCKEGR 161
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNI 271
DA+ MK G + + + L+ V A + + + C + + +N+
Sbjct: 162 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNL 221
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G C ++ A + ++ M G D +Y I C++ + ++ +G
Sbjct: 222 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 281
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
KP+ +T+ +++ L K+ + + A K EKM S C PDT YSS I L K ++
Sbjct: 282 IKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 341
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+M ++ V P+ + Y +I + +M C PD TY ++
Sbjct: 342 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 401
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C + R+ +L M KN V++D Y +L+ G G+ + A S ++M S VP
Sbjct: 402 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 461
Query: 512 STYKMLEEKLEKKRL 526
TY +L L + RL
Sbjct: 462 FTYFILLRHLVRMRL 476
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 167/418 (39%), Gaps = 62/418 (14%)
Query: 164 YNTMVDVL---GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
YN +++ L G++ + C +++ ++ N T ++++ L + G+ D A +
Sbjct: 254 YNALINALCKDGRTDQACSLFDSLETRGIKPNA----VTFNSLINGLCKSGKADIAWKFL 309
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCK 278
M G DT S ++ L K + E KD P S+ + I+IH K
Sbjct: 310 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP-STVNYTIVIHKLLK 368
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R + EM G +PDVV+YT + YC E + ++ L EM + G +
Sbjct: 369 ERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 428
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL------------IFILSKAG- 385
Y +M Q + A+ + ++M S +P+ Y L + L+ AG
Sbjct: 429 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGV 488
Query: 386 ----RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+ D +F+ MKK +PN TY++++ E A L+ M+ED +
Sbjct: 489 WKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNE 548
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF-- 499
+ Y L+ C+ KR L+ M ++ +Y L+ GLI G+ + A F
Sbjct: 549 DIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMN 608
Query: 500 --------EEMISKGIV-------------------------PYHSTYKMLEEKLEKK 524
+E++ K I+ P H TY ML E+L +
Sbjct: 609 SRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPDR 666
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 116/263 (44%), Gaps = 31/263 (11%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M + G+ PD ++ I YCR D +M +G V++Y ++ L +A +
Sbjct: 1 MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60
Query: 352 INEALKVYEKMKSDDC-------------------------------LPDTSFYSSLIFI 380
I+EA++++ +M D P T Y++++
Sbjct: 61 IDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDF 120
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ + K+A E+ ++M ++G+ P V+T +I++ C +AL++L+ M+ CKP+
Sbjct: 121 RCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 180
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L++ C + ++ LL M V+ DA TY L+RG G +E A
Sbjct: 181 VWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 240
Query: 501 EMISKGIVPYHSTYKMLEEKLEK 523
M G++ TY L L K
Sbjct: 241 LMEGDGLIADQYTYNALINALCK 263
>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
Length = 772
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 190/384 (49%), Gaps = 5/384 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++ L ++ F + E++ +M E + + +TI+ + + G + A E M
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSE-HGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
YG++ + + ++ L + A ++ E KDC PL FNIL+ +C+
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC-PLDDVTFNILVDFFCQNGL 371
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD + +++M G PDV++YT I +C+E + LK M GCKP+ ++YTI
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ L A + +A ++ +M C P+ +++LI L K G V+ A E+ + M G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P++++Y+T+I + E AL+LL M P+ Y+ + R+ R+ +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ ++ + DA Y +++ L + + + A FF M+S G +P STY ML + L
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611
Query: 522 EKKRLG-NAKERINKLLAHAKEQK 544
+ L A+E +++L + +K
Sbjct: 612 ASEGLAKEAQELLSELCSRGALRK 635
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 169/410 (41%), Gaps = 83/410 (20%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFK 259
I+ R G + ++V M G DT +++++ + + V+ A + L F
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF 210
Query: 260 DCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C + I +N ++ G C ++ D ++ M EM + +P++V++ I + CR F
Sbjct: 211 GC---EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 318 RKVDDTLKEMQEKGC-----------------------------------KPSVITYTIV 342
+V + L +M E GC KP+V+ Y V
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L A++ EA ++ +M DC D ++ L+ + G V E+ E M G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM----- 457
+P+V+TY T+I+ C + A+ LL+ M CKP+ +Y +LK C R
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 458 ------------------KVLNF------------LLTHMFKNDVSMDAGTYASLVRGLI 487
++NF LL M N S D +Y++++ GL
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
++GK E A M++KGI P Y + L ++ R+NK++
Sbjct: 508 KAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG------RVNKVI 551
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 160/345 (46%), Gaps = 4/345 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T ++R L GR DA+E M G V+++ + ++ +V +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K C L + N++++ C+ VD+A ++++ G D+VSY ++ C K
Sbjct: 173 HAKGCT-LDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ V++ + EM C P+++T+ ++ L + +V +M C PD Y++
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I + K G ++ ANEI M G+ PNV+ YNT++ C+ + A +LL +M +
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C D T+ L+ C+ + + LL M + D TY +++ G + G ++ A
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHA 540
+ M S G P +Y ++ + L R +A+E +++++
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 141/310 (45%), Gaps = 46/310 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N +VD ++ + EL+++M L++G + + T +T++ + G D+AV +
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQM--LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M G + +T + ++++ L A ++ + + P + FN LI+ CK
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V+ A + +K+M G SPD++SY+ I+ + + + L M KG P+ I Y+
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 342 VMHALGKAKQINEALKVYEKMK-----------------------------------SDD 366
+ AL + ++N+ +++++ +K S+
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C+P+ S Y+ LI L+ G K+A E+ ++ +G + L + IS+ +EN
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGISNC----TQENG- 651
Query: 427 KLLQKMEEDL 436
QK EE+L
Sbjct: 652 --KQKCEENL 659
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 112/270 (41%), Gaps = 33/270 (12%)
Query: 301 VVSYTCFIEHYCREKDF------------------------------RKVD--DTLKEMQ 328
VV+Y + YCR R D + L EM
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
KGC P Y +++ A ++ +++V E M + C DT + ++ + + G V
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A + + G ++++YN ++ C + +L+ +M C P+ T+ L+
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
CR + ++ +L M ++ + D YA+++ G+ + G LE+A M S G+
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318
Query: 509 PYHSTYKMLEEKL-EKKRLGNAKERINKLL 537
P Y + + L +R A+E ++++
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMF 348
>gi|414872586|tpg|DAA51143.1| TPA: empty pericarp4 [Zea mays]
Length = 595
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 202/451 (44%), Gaps = 23/451 (5%)
Query: 87 RVLSENHETDVDKIS------KILSKQYQSPDKVVEALKGCGVSVSNS-LVEQTLRRFSN 139
R LS D +S ++L + + P ++ AL G+ S+ L++ LRR
Sbjct: 11 RCLSSTGAADPSLVSSAEHAYRLLRRHHSDPQRLSAALSASGLDASSPHLLDAVLRRCGA 70
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
+ A FF W + KS + L + + +
Sbjct: 71 ASSLALHFFHWCSPSLPSPLPSSLALLA-----KSFSRASSAPSPSLLAPLPSQLLGPSL 125
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
+ ++RRL + A+ + L+++L K V A ++ E +
Sbjct: 126 LCPVLRRLPQPRLLPFALSLLSARPDH---DQPALFLSLLESLSKAGHVLTAEQLVEELQ 182
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+PLS + + L++GWC+ K+D+A+ + M + DVV + + + E F
Sbjct: 183 PRLPLSLRHYTALLYGWCRQGKLDEAKHVLARMKAADVALDVVVFNTLLAGFVAEGRFED 242
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ +M+++GC P+ ++YT ++ LG +++EA++V+ +M+ C PD Y +L+
Sbjct: 243 AFELAGQMEQRGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVN 302
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
KAG++ E + M + G+ + Y+ + + + E L+L+++M E C P
Sbjct: 303 TFCKAGKISQGYEFLDAMSRDGLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPP 362
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D + Y ++++ CR K L M +S T+A +V GL+ G L ACS+F
Sbjct: 363 DLKIYNVVIRLACRLGETKQAMTLWNEMESAGLSPVVDTFAIVVSGLVGQGLLIEACSYF 422
Query: 500 EEMISKG--IVPYHSTYKML------EEKLE 522
++M+ +G +VP + K L +EKLE
Sbjct: 423 KDMVGRGLFVVPQYGVLKDLLNALVRDEKLE 453
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/291 (20%), Positives = 128/291 (43%), Gaps = 6/291 (2%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++NT++ +F +EL +M++ + + +T+++ L GR D+A+ F
Sbjct: 226 VFNTLLAGFVAEGRFEDAFELAGQMEQ-RGCPPNAVSYTTLIQGLGARGRVDEAMRVFVE 284
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M++ G D L++T K + Y+ FL+ +D + + + +++ K
Sbjct: 285 MRRKGCAPDAVTYGTLVNTFCKAGKISQGYE-FLDAMSRDGLRVDAAVYHGFFVAHEKKE 343
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++++ + M+ M + PD+ Y I CR + ++ EM+ G P V T+
Sbjct: 344 QLEECLELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMTLWNEMESAGLSPVVDTFA 403
Query: 341 IVMHALGKAKQINEALKVYEKMKSDD--CLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
IV+ L + EA ++ M +P L+ L + +++ A ++++ +
Sbjct: 404 IVVSGLVGQGLLIEACSYFKDMVGRGLFVVPQYGVLKDLLNALVRDEKLELAKDVWKCIV 463
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
+G NV + I + A+ + A M E P +T+A L+K
Sbjct: 464 SKGCELNVSAWTIWIHALFAKKHVKEACLYCLDMLEAGLMPQPDTFAKLMK 514
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 101/344 (29%), Positives = 167/344 (48%), Gaps = 5/344 (1%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T ++++ L + GR D A+ M K G D S+L++ L K + ++ A +
Sbjct: 50 GTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQG 109
Query: 258 FKDCIPLSSQI---FNILIHGWCKTRKVDDAQKAMKEMF-QQGFSPDVVSYTCFIEHYCR 313
I + +N L++ CK +KV A M ++ PDVVSY+ I+ +C+
Sbjct: 110 MNRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCK 169
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + + K+M + C P+V TY ++ L + +I +A VYE+M S C PD
Sbjct: 170 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVIT 229
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
YS+LI S A + A+E+FE M +G PN +TYN ++ C S+ + A +L +KM
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 289
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E C PD TY LL C +++ + M D Y L++G +GK
Sbjct: 290 ERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPG 349
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
A F+ M+S+ P ++ ++ + L K KRL +A E ++
Sbjct: 350 EARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 180/371 (48%), Gaps = 6/371 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE-LNNGYVSLATMSTIMRRLVRGGRYD 214
GY ++ +++ L K+ K E ++ M+ ++ S + ++++ L + +
Sbjct: 79 GYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKKVH 138
Query: 215 DAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNI 271
A F M + V D + S+L+D K + + A K++ + D C+P + +N
Sbjct: 139 QAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVP-NVTTYNA 197
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++G + ++ DAQ +EM G SPDV++Y+ I + + + + + M +G
Sbjct: 198 FLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISRG 257
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C+P+ +TY ++H L K + +EA +++ KM C PD Y++L++ G+++ A
Sbjct: 258 CRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQAV 317
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
E+F++M +G P+V+ YN ++ + A +L Q M CKPD ++ ++
Sbjct: 318 EVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGL 377
Query: 452 CRKKRMKVLNFLLTHMFKN-DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
+ KR+ + M ++ S D TY SL+ GL +L A F+E+ + P
Sbjct: 378 SKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPD 437
Query: 511 HSTYKMLEEKL 521
+ +L E +
Sbjct: 438 PHAFNVLLEAM 448
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 157/330 (47%), Gaps = 4/330 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN++++ L K+KK + + M + + + S ++ + A + ++ M
Sbjct: 124 YNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQM 183
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ + ++ L++ + A V+ E C P ++ LIHG+ RK
Sbjct: 184 IDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSP-DVITYSTLIHGFSLARK 242
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
D A + + M +G P+ V+Y C + C+E + + ++M E+GC P +TYT
Sbjct: 243 HDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTT 302
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ +I +A++V+++M S PD Y+ L+ +AG+ +A ++F+ M +
Sbjct: 303 LLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRE 362
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDL-CKPDCETYAPLLKMCCRKKRMKVL 460
P+ +++N MI ++A+++ ++ME+D C PD TY L+ C ++R+
Sbjct: 363 CKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEA 422
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
+ + + +S D + L+ + +G
Sbjct: 423 MKVFKEIDRLKLSPDPHAFNVLLEAMYAAG 452
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 136/331 (41%), Gaps = 76/331 (22%)
Query: 263 PLSSQIFNILIHGWCKTRK--------------------------------------VDD 284
PL++ + + G CK+ K VD
Sbjct: 8 PLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDS 67
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ---------------- 328
A ++ M ++G+ PD+ +++ I C+ ++ + L+ M
Sbjct: 68 ALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSL 127
Query: 329 ----------------------EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
E+ P V++Y+I++ K ++ A K+Y++M +
Sbjct: 128 LNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLN 187
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C+P+ + Y++ + L + GR+ DA ++E+M G P+V+TY+T+I + + A
Sbjct: 188 CVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAH 247
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+L + M C+P+ TY LL C++ + + L M + D TY +L+ G
Sbjct: 248 ELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGF 307
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKML 517
GK+E A F+EM+SKG P Y L
Sbjct: 308 CNVGKIEQAVEVFDEMVSKGHDPDVVAYNCL 338
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 181/363 (49%), Gaps = 8/363 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ + ++++EM E + T T++ + GR D+AV+ F M
Sbjct: 517 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 576
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-----CIPLSSQIFNILIHGWCK 278
G + + +V+ + L+ G + L ++D + ++ +N+L+H
Sbjct: 577 LTKG---EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 633
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ +A + ++EM +G +PDV +Y I +C+E + +K + + M +G + +V+T
Sbjct: 634 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 693
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT +++AL K Q+ E K++++ PD Y++LI S +G + A EI +M+
Sbjct: 694 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 753
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
K+ + P+ +TYNT++ C + A KL+ +M E +PD TY L+ K +K
Sbjct: 754 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 813
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
+ M + TY +L++GL ++G+ + A + +EM+ GI P STY L
Sbjct: 814 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 873
Query: 519 EKL 521
E L
Sbjct: 874 EGL 876
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 179/375 (47%), Gaps = 8/375 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N M+ L + K EL+++M N T +T++ GR A++ R M
Sbjct: 486 FNIMLRHLCSAGKPARALELLRQMPRPN-----AVTYNTVIAGFCSRGRVQAALDIMREM 540
Query: 224 K-KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
+ + G+ + ++ K V+ A KVF E K + + ++N LI G+C
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 600
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+D A M ++G + V +Y + + + + ++EM KG P V TY
Sbjct: 601 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 660
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ K + +AL+++E M Y++LI+ LSK G+V++ +++F++ ++
Sbjct: 661 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 720
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+++ YN +I+S + A +++ +ME+ PD TY L++ C R+
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 780
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L+ M + + D TY +L+ G G ++ A EM++KG P TY L +
Sbjct: 781 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 840
Query: 521 LEKKRLGNAKERINK 535
L K G+ E + K
Sbjct: 841 LCKNGQGDDAENMVK 855
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 154/334 (46%), Gaps = 27/334 (8%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
MK + T +L L+ L A+ +F + F+ +PL + FNI++ C K
Sbjct: 443 MKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGK 498
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GCKPSVITYT 340
A + +++M + P+ V+Y I +C + D ++EM+E+ G P+ TY
Sbjct: 499 PARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 554
Query: 341 IVMHALGKAKQINEALKVYEKMKS-DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
V+ K +++EA+KV+++M + + P+ Y++LI G++ A + M +
Sbjct: 555 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 614
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+GV V TYN ++ + A +L+++M PD TY L+ C++ +K
Sbjct: 615 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKK 674
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP---------- 509
+ +M + V TY +L+ L + G+++ F+E + +GI P
Sbjct: 675 ALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALIN 734
Query: 510 YHSTYKMLEE------KLEKKRLGNAKERINKLL 537
HST ++ ++EKKR+ N L+
Sbjct: 735 SHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLM 768
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 18/281 (6%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG--- 210
+ G T YN +V L + +ELV+EM G LA L+ G
Sbjct: 614 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM-----GGKGLAPDVFTYNILINGHCK 668
Query: 211 -GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQI 268
G A+E F M + GV + L+ L K V+ K+F E + I +
Sbjct: 669 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 728
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC---REKDFRKVDDTLK 325
+N LI+ + +D A + M EM ++ +PD V+Y + C R + RK+ D
Sbjct: 729 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID--- 785
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM E+G +P ++TY ++ + +AL++ +M + P Y++LI L K G
Sbjct: 786 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 845
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+ DA + ++M + G+ P+ TY ++I +E+E A+
Sbjct: 846 QGDDAENMVKEMVENGITPDDSTYISLIEGLT--TEDERAI 884
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 11/165 (6%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YN +++ S +E++ EM++ + T +T+MR L GR D+A +
Sbjct: 728 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV-TYNTLMRGLCLLGRVDEARKLIDE 786
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-----CIPLSSQIFNILIHGWC 277
M + G++ D V +TL+ G S++ K L ++ + +N LI G C
Sbjct: 787 MTERGIQPDL----VTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLC 842
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
K + DDA+ +KEM + G +PD +Y IE E D R +DD
Sbjct: 843 KNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE-DERAIDD 886
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 86/179 (48%), Gaps = 10/179 (5%)
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+++ A + +L++Y +MKS T+ L+ L A A +F DM +
Sbjct: 422 LLLTASAAVRPHATSLRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRL 477
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK-V 459
+ T+N M+ C+ + AL+LL++M +P+ TY ++ C + R++
Sbjct: 478 RLPLCTTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAA 533
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV-PYHSTYKML 517
L+ + + ++ + TY +++ G + G+++ A F+EM++KG V P Y L
Sbjct: 534 LDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 592
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 186/412 (45%), Gaps = 42/412 (10%)
Query: 145 FGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMST 202
GF AK + G T +NT+++ L K KF EL +M + GY + T +T
Sbjct: 175 LGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDM--VARGYQPDVHTYTT 232
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
I+ L + G A FR M + G + D S ++D+L K V A +F +
Sbjct: 233 IINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIF-SYMKAK 291
Query: 263 PLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
+S IF N LI G C + +A + EM P++V+++ I +C+E + +
Sbjct: 292 GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEA 351
Query: 321 DDTLKEMQE-----------------------------------KGCKPSVITYTIVMHA 345
LK M E KGCKP V +Y I+++
Sbjct: 352 RGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILING 411
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
KAK+I EA +++ +M PD Y++LI L + GR+++A+++F++M G +P+
Sbjct: 412 YCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPD 471
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
+ TY+ ++ C + A +L + M+ KP+ Y L+ C+ + +K L +
Sbjct: 472 LCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFS 531
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+F + + Y +++ GL + G L+ A F M G P +Y ++
Sbjct: 532 ELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVI 583
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 171/359 (47%), Gaps = 37/359 (10%)
Query: 203 IMRRLVRGGRYDDAVEAF-RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KD 260
++ +V+ Y DAV + + M+ G+ DT L +L++ + V+ + V + K
Sbjct: 127 LLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKL 186
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
+ L+ FN LI+G CK K A + +M +G+ PDV +YT I C+ +
Sbjct: 187 GLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAA 246
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK----------------- 363
++M E GC+P V+TY+ ++ +L K +++NEAL ++ MK
Sbjct: 247 AGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQG 306
Query: 364 ------------------SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
S + +P+ +S LI I K G V +A + + M + GV PN
Sbjct: 307 LCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPN 366
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
V+TY+++++ ++E A KL M CKPD +Y L+ C+ KR+ L
Sbjct: 367 VVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFN 426
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M ++ D +Y +L+ GL + G+L A F+ M++ G +P TY +L + K+
Sbjct: 427 EMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQ 485
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 154/308 (50%), Gaps = 5/308 (1%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
A F++ K + G YN+++ L ++ ++ EM LN ++ T S +
Sbjct: 281 ALDIFSYMKAK-GISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNI-MPNIVTFSLL 338
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDC 261
+ + G +A + M + GVE + S LM+ V A K+F + K C
Sbjct: 339 INIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGC 398
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
P +NILI+G+CK +++ +A++ EM QG +PD+VSY I+ C+ R+
Sbjct: 399 KP-DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 457
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D K M G P + TY+I++ K + +A +++ M+S P+ Y+ LI +
Sbjct: 458 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 517
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K+ +K+A ++F ++ QG+ PNV Y T+I+ C + AL+ + MEED C P+
Sbjct: 518 CKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNE 577
Query: 442 ETYAPLLK 449
+Y +++
Sbjct: 578 FSYNVIIR 585
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 157/339 (46%), Gaps = 5/339 (1%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+++ T +T++ L + G++ AVE F M G + D + +++ L K A +
Sbjct: 190 LTIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGL 249
Query: 255 FLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
F + + C P ++ +I CK R+V++A M +G SP++ +Y I+ C
Sbjct: 250 FRKMGEAGCQP-DVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLC 308
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+R+ L EM P+++T++++++ K + EA V + M P+
Sbjct: 309 NFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVV 368
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
YSSL+ S V +A ++F+ M +G P+V +YN +I+ C A +L +M
Sbjct: 369 TYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEM 428
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
PD +Y L+ C+ R++ + L +M N D TY+ L+ G + G L
Sbjct: 429 IHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYL 488
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
A F M S + P Y +L + + K R N KE
Sbjct: 489 AKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSR--NLKE 525
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 155 bits (392), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 190/384 (49%), Gaps = 5/384 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++ L ++ F + E++ +M E + + +TI+ + + G + A E M
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSE-HGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
YG++ + + ++ L + A ++ E KDC PL FNIL+ +C+
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC-PLDDVTFNILVDFFCQNGL 371
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD + +++M G PDV++YT I +C+E + LK M GCKP+ ++YTI
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ L A + +A ++ +M C P+ +++LI L K G V+ A E+ + M G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P++++Y+T+I + E AL+LL M P+ Y+ + R+ R+ +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ ++ + DA Y +++ L + + + A FF M+S G +P STY ML + L
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611
Query: 522 EKKRLG-NAKERINKLLAHAKEQK 544
+ L A+E +++L + +K
Sbjct: 612 ASEGLAKEAQELLSELCSRGALRK 635
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 169/410 (41%), Gaps = 83/410 (20%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFK 259
I+ R G + ++V M G DT +++++ + + V+ A + L F
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF 210
Query: 260 DCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C + I +N ++ G C ++ D ++ M EM + +P++V++ I + CR F
Sbjct: 211 GC---EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 318 RKVDDTLKEMQEKGC-----------------------------------KPSVITYTIV 342
+V + L +M E GC KP+V+ Y V
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L A++ EA ++ +M DC D ++ L+ + G V E+ E M G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM----- 457
+P+V+TY T+I+ C + A+ LL+ M CKP+ +Y +LK C R
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 458 ------------------KVLNF------------LLTHMFKNDVSMDAGTYASLVRGLI 487
++NF LL M N S D +Y++++ GL
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
++GK E A M++KGI P Y + L ++ R+NK++
Sbjct: 508 KAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG------RVNKVI 551
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 160/345 (46%), Gaps = 4/345 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T ++R L GR DA+E M G V+++ + ++ +V +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K C L + N++++ C+ VD+A ++++ G D+VSY ++ C K
Sbjct: 173 HAKGCT-LDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ V++ + EM C P+++T+ ++ L + +V +M C PD Y++
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I + K G ++ ANEI M G+ PNV+ YNT++ C+ + A +LL +M +
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C D T+ L+ C+ + + LL M + D TY +++ G + G ++ A
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHA 540
+ M S G P +Y ++ + L R +A+E +++++
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 141/310 (45%), Gaps = 46/310 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N +VD ++ + EL+++M L++G + + T +T++ + G D+AV +
Sbjct: 359 FNILVDFFCQNGLVDRVIELLEQM--LSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M G + +T + ++++ L A ++ + + P + FN LI+ CK
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V+ A + +K+M G SPD++SY+ I+ + + + L M KG P+ I Y+
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536
Query: 342 VMHALGKAKQINEALKVYEKMK-----------------------------------SDD 366
+ AL + ++N+ +++++ +K S+
Sbjct: 537 IACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNG 596
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C+P+ S Y+ LI L+ G K+A E+ ++ +G + L + IS+ +EN
Sbjct: 597 CMPNESTYTMLIKGLASEGLAKEAQELLSELCSRGALRKHLMRHFGISNC----TQENG- 651
Query: 427 KLLQKMEEDL 436
QK EE+L
Sbjct: 652 --KQKCEENL 659
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 112/270 (41%), Gaps = 33/270 (12%)
Query: 301 VVSYTCFIEHYCREKDF------------------------------RKVD--DTLKEMQ 328
VV+Y + YCR R D + L EM
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
KGC P Y +++ A ++ +++V E M + C DT + ++ + + G V
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A + + G ++++YN ++ C + +L+ +M C P+ T+ L+
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
CR + ++ +L M ++ + D YA+++ G+ + G LE+A M S G+
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318
Query: 509 PYHSTYKMLEEKL-EKKRLGNAKERINKLL 537
P Y + + L +R A+E ++++
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMF 348
>gi|413934769|gb|AFW69320.1| hypothetical protein ZEAMMB73_542469 [Zea mays]
Length = 539
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 111/379 (29%), Positives = 180/379 (47%), Gaps = 16/379 (4%)
Query: 166 TMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK 225
T V +L + F W + + LA + ++RR R GR D AV FR +++
Sbjct: 69 TAVSLLASRRLFAAAWRFLLFQPAAASPPPPLAAFAPLLRRYARIGRTDSAVRTFRFLQR 128
Query: 226 ----YGVEKD----TRALSVLM---DTLVKGNSVEHAYKVFLEFK---DCIPLSSQIFNI 271
Y VE D ALS L+ D L K A + + + D +I+NI
Sbjct: 129 HPGRYAVESDVTPSAEALSPLILTIDALCKEGHPRAAALLVAQIRREDDGWAPDVRIYNI 188
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L++GW + R++D A+K M +G P VV+Y FI+ +C + L +M+E+G
Sbjct: 189 LLNGWSRARRLDKAEKLWAAMRDEGVRPTVVTYGTFIDAHCVMRRPDHAMALLDQMREEG 248
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+ +++T +++AL A + +A KV EK P+ S ++SL+F + G + A+
Sbjct: 249 IEANLLTCNPIVYALAHAGRFGDAHKVLEKFPLYGVAPNISTFNSLVFGYCRHGDLAGAS 308
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ + M +G+ P TYN + + + L KM + PD TY L+KM
Sbjct: 309 RVLKAMLGRGISPTARTYNYFFTVFARNLSIDLGMNLYVKMVSNGYAPDRLTYHLLIKML 368
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C R+++ +L M + D T L+ L + E A + FE+M +G+VP +
Sbjct: 369 CEANRLELTLQMLQEMRNSGFEPDLATSTMLIHLLCRRHQFEEAFAEFEQMFERGMVPQY 428
Query: 512 STYKMLEEKLEKKRLGNAK 530
TY+ML +L KRLG K
Sbjct: 429 ITYRMLMREL--KRLGLVK 445
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 109/256 (42%), Gaps = 1/256 (0%)
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQ 267
R R D A + + M+ GV +D +HA + + ++ I +
Sbjct: 195 RARRLDKAEKLWAAMRDEGVRPTVVTYGTFIDAHCVMRRPDHAMALLDQMREEGIEANLL 254
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
N +++ + DA K +++ G +P++ ++ + YCR D LK M
Sbjct: 255 TCNPIVYALAHAGRFGDAHKVLEKFPLYGVAPNISTFNSLVFGYCRHGDLAGASRVLKAM 314
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+G P+ TY + I+ + +Y KM S+ PD Y LI +L +A R+
Sbjct: 315 LGRGISPTARTYNYFFTVFARNLSIDLGMNLYVKMVSNGYAPDRLTYHLLIKMLCEANRL 374
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+ ++ ++M+ G P++ T +I C R + E A ++M E P TY L
Sbjct: 375 ELTLQMLQEMRNSGFEPDLATSTMLIHLLCRRHQFEEAFAEFEQMFERGMVPQYITYRML 434
Query: 448 LKMCCRKKRMKVLNFL 463
++ R +K++ L
Sbjct: 435 MRELKRLGLVKLVQKL 450
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 101/343 (29%), Positives = 165/343 (48%), Gaps = 43/343 (12%)
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGN---SVEHAYKVFLEFKDCIPLSSQIFNIL 272
A EAF K YG + + + L+ LVK N VE+ YK ++ + I + FNI
Sbjct: 149 AYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR--IHTNLNTFNIF 206
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR------------------- 313
I+G C+ K++ A+ A+++M G SP+VV+Y ++ YC+
Sbjct: 207 INGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLA 266
Query: 314 ------EKDFRKVDD-------------TLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
E F + D +EMQ++G KP+++TY +++ L ++ E
Sbjct: 267 NKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEE 326
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A+ +++KM P+ Y++LI K +K+A ++F+D+ KQ +VPNV+T+NTMI
Sbjct: 327 AIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMID 386
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
+ C E L M ++ P+ TY L+ CRK+ ++ LL M +
Sbjct: 387 AYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKG 446
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
D TY L+ GL ++ K A EM + G+ P H TY L
Sbjct: 447 DVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTL 489
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 196/426 (46%), Gaps = 46/426 (10%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
+L A+ FT AK G+ + N ++ L K K + + KEM + + +L T
Sbjct: 145 ELHCAYEAFTRAK-DYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIK-RRIHTNLNT 202
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
+ + L R G+ + A +A MK +G+ + + L+D K S YK K
Sbjct: 203 FNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMK 262
Query: 260 DCIPLSSQI------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ L+++I FN LI G+CK V A+KA +EM +QG P++V+Y I C
Sbjct: 263 EM--LANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCN 320
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D +M G KP+++TY +++ K K + EA KV++ + + +P+
Sbjct: 321 NGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVIT 380
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
++++I K G +++ + M +G++PNV TYN +I+ C + + + A +LL +ME
Sbjct: 381 FNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEME 440
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK-----NDVS----MDA-------- 476
K D TY L+ C+ + + LL MF N V+ MD
Sbjct: 441 NKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLK 500
Query: 477 ------------------GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
TY L++G + KLE A EM+ KG+ P +TY ++
Sbjct: 501 AALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVR 560
Query: 519 -EKLEK 523
E LEK
Sbjct: 561 LEMLEK 566
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 164/331 (49%), Gaps = 5/331 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDEL--NNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YNT+VD K M++ M E+ N + T +T++ + A +AF
Sbjct: 238 YNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFE 297
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKT 279
M+K G++ + + L++ L +E A ++ + + L I +N LI+G+CK
Sbjct: 298 EMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVG-LGLKPNIVTYNALINGFCKK 356
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+ + +A K ++ +Q P+V+++ I+ YC+E + M ++G P+V TY
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 416
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ L + + + A ++ +M++ D Y+ LI L K + ++A ++ +M
Sbjct: 417 NCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 476
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G+ PN +TYNT++ C + + AL + +ME++ +P+ TY L+K C+ +++
Sbjct: 477 LGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEA 536
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
N LL M + ++ + TY + ++E G
Sbjct: 537 ANGLLNEMLEKGLNPNRTTYDIVRLEMLEKG 567
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 156/364 (42%), Gaps = 53/364 (14%)
Query: 226 YGVEKDTRALSVL------------MDTLVKG--NSVEHAYKVFLEFKDCIPLSSQIFNI 271
YG+E ++ L L +D+ VK ++V + L ++ I ++
Sbjct: 76 YGLEPTSKVLHFLANSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDM 135
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+ + K ++ A +A GF + S + +E V+ KEM ++
Sbjct: 136 LVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRR 195
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG------ 385
++ T+ I ++ L +A ++N+A E MK+ P+ Y++L+ K G
Sbjct: 196 IHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMY 255
Query: 386 --------------------------------RVKDANEIFEDMKKQGVVPNVLTYNTMI 413
V A + FE+M+KQG+ PN++TYN++I
Sbjct: 256 KAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLI 315
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ C + E A+ L KM KP+ TY L+ C+KK MK + + K ++
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV 375
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKER 532
+ T+ +++ + G +E S M+ +GI+P STY L L K+ L AKE
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 435
Query: 533 INKL 536
+N++
Sbjct: 436 LNEM 439
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 187/372 (50%), Gaps = 7/372 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G H YN +++ L + +F + +V +M + GY + T+S+++ +G R
Sbjct: 99 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKM--MKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILI 273
DA++ M++ G D + ++D K V A ++F +D + + +N L+
Sbjct: 157 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 216
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G C + + DA + M++M + P+V+++T I+ + +E F + +EM +
Sbjct: 217 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 276
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P V TY +++ L +++EA ++ + M + CLPD Y++LI K+ RV + ++
Sbjct: 277 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 336
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
F +M ++G+V + +TYNT+I + A ++ +M+ +P+ TY+ LL C
Sbjct: 337 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCM 393
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
R++ L +M K+++ +D TY ++ G+ + G +E A F + KG+ P +
Sbjct: 394 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 453
Query: 514 YKMLEEKLEKKR 525
Y + +KR
Sbjct: 454 YTTMISGFCRKR 465
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 161/328 (49%), Gaps = 14/328 (4%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV- 254
S+ S ++ ++ + YD + F M+ G+ D + +++++ L + + A V
Sbjct: 68 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 127
Query: 255 --FLEFK---DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
++F D + +SS LI+G+C+ +V DA + +M + GF PDVV Y I+
Sbjct: 128 GKMMKFGYEPDVVTVSS-----LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 182
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
C+ + M+ G + +TY ++ L + + ++A ++ M D +P
Sbjct: 183 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 242
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ ++++I + K G+ +A +++E+M ++ V P+V TYN++I+ C + A ++L
Sbjct: 243 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 302
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
M C PD TY L+ C+ KR+ L M + + D TY ++++G ++
Sbjct: 303 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 362
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKML 517
G+ + A F M S+ P TY +L
Sbjct: 363 GRPDAAQEIFSRMDSR---PNIRTYSIL 387
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 147/306 (48%), Gaps = 9/306 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGG 211
+ G+ +YNT++D S K L+ + V+ D + V T ++++ L G
Sbjct: 167 EMGFRPDVVIYNTIID---GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFN 270
R+ DA R M + + + ++D VK A K++ E + C+ +N
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI+G C +VD+A++ + M +G PDVV+Y I +C+ K + +EM ++
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 343
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G ITY ++ +A + + A +++ +M D P+ YS L++ L RV+ A
Sbjct: 344 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKA 400
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+FE+M+K + ++ TYN +I C E+A L + + KPD +Y ++
Sbjct: 401 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 460
Query: 451 CCRKKR 456
CRK++
Sbjct: 461 FCRKRQ 466
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 150/278 (53%), Gaps = 7/278 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN++V L S ++ L+++M + + ++ T + ++ V+ G++ +A++ + M
Sbjct: 212 YNSLVAGLCCSGRWSDAARLMRDM-VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 270
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ V+ D + L++ L V+ A ++ + K C+P +N LI+G+CK+++
Sbjct: 271 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP-DVVTYNTLINGFCKSKR 329
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD+ K +EM Q+G D ++Y I+ Y + + M + P++ TY+I
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSI 386
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ L ++ +AL ++E M+ + D + Y+ +I + K G V+DA ++F + +G
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+ P+V++Y TMIS C + + + + L +KM+ED P
Sbjct: 447 LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 113/251 (45%), Gaps = 1/251 (0%)
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
+M Q P +V ++ + + K++ V M+ G + +Y IV++ L +
Sbjct: 59 KMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCS 118
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
+ AL V KM PD SSLI + RV DA ++ M++ G P+V+ YN
Sbjct: 119 RFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYN 178
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
T+I +C +A++L +ME D + D TY L+ C R L+ M
Sbjct: 179 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 238
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNA 529
D+ + T+ +++ ++ GK A +EEM + + P TY L L R+ A
Sbjct: 239 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 298
Query: 530 KERINKLLAHA 540
K+ ++ ++
Sbjct: 299 KQMLDLMVTKG 309
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 81/199 (40%), Gaps = 35/199 (17%)
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
+ E + ++ KM LP +S ++ ++K+ +F M+ G+ ++ +YN
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYN 108
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR----------MKVL 460
+I+ C S AL ++ KM + +PD T + L+ C+ R M+ +
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEM 168
Query: 461 NF-------------------------LLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
F L M ++ V DA TY SLV GL SG+ A
Sbjct: 169 GFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDA 228
Query: 496 CSFFEEMISKGIVPYHSTY 514
+M+ + IVP T+
Sbjct: 229 ARLMRDMVMRDIVPNVITF 247
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 173/339 (51%), Gaps = 9/339 (2%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T + ++++L GR EA R + G D A + ++ ++ A ++ E
Sbjct: 97 GTCAALIKKLSASGR---TAEARRVLAACG--PDVMAYNAMVAGYCGAGQLDAARRLVAE 151
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ + +N LI G C + +A + EM ++ PDVV+YT +E C+ +
Sbjct: 152 MP--VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGY 209
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
++ L EM++KGC P ++TY +V++ + + ++++A++ + + S C P+T Y+ +
Sbjct: 210 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 269
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ L A R +DA E+ +M ++G PNV+T+N +IS C + E AL++L+++ + C
Sbjct: 270 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 329
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P+ +Y PLL C++K+M L M D +Y +L+ L SG++++A
Sbjct: 330 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 389
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
++ KG P +Y + + L K G KE + L
Sbjct: 390 LLHQLKDKGCAPVLISYNTVIDGLTKA--GKTKEALELL 426
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 181/332 (54%), Gaps = 7/332 (2%)
Query: 182 ELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+ +K +DE+ + + + T + ++ + + GR DDA+E + + YG E +T + ++++
Sbjct: 211 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 270
Query: 240 DTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
L E A ++ E K C P + FN+LI C+ V+ A + ++++ + G
Sbjct: 271 KGLCTAERWEDAEELMGEMGQKGCPP-NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 329
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+P+ +SY + +C++K K L M +GC P +++Y ++ AL ++ +++ A++
Sbjct: 330 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 389
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ ++K C P Y+++I L+KAG+ K+A E+ +M +G+ P+++TY+T+ + C
Sbjct: 390 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 449
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETY-APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
E+A++ K+++ +P+ Y A +L +C R++ ++ L +M N +
Sbjct: 450 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAID-LFAYMIGNGCMPNE 508
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIV 508
TY L+ GL G ++ A +E+ S+G+V
Sbjct: 509 STYTILIEGLAYEGLIKEARDLLDELCSRGVV 540
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 191/421 (45%), Gaps = 43/421 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN MV + + LV EM + Y T +T++R L GR +A+ M
Sbjct: 129 YNAMVAGYCGAGQLDAARRLVAEMPVEPDAY----TYNTLIRGLCGRGRTANALAVLDEM 184
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
+ D ++L++ K + + A K+ E +D C P +N++++G C+ +
Sbjct: 185 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTP-DIVTYNVVVNGICQEGR 243
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT--- 338
VDDA + +K + G P+ VSY ++ C + + ++ + EM +KGC P+V+T
Sbjct: 244 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 303
Query: 339 --------------------------------YTIVMHALGKAKQINEALKVYEKMKSDD 366
Y ++HA K K++++A+ + M S
Sbjct: 304 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 363
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C PD Y++L+ L ++G V A E+ +K +G P +++YNT+I + + AL
Sbjct: 364 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 423
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+LL +M +PD TY+ + CR+ R++ + + + Y +++ GL
Sbjct: 424 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 483
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL-GNAKERINKLLAHAKEQKT 545
+ + A F MI G +P STY +L E L + L A++ +++L + +K+
Sbjct: 484 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKS 543
Query: 546 F 546
Sbjct: 544 L 544
>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 676
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 186/384 (48%), Gaps = 8/384 (2%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM 187
+LVE L +ND+ AF F + G Y ++ L + + + K+M
Sbjct: 10 NLVEANL---NNDVNSAFSVFNMMPKK-GCRRNEVSYTNLIHGLCEVGRVDEGINIFKKM 65
Query: 188 DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS 247
E ++ Y ++ T + I+ L GR +A+ F M++ G E + +V+++ + K
Sbjct: 66 RE-DDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETK 124
Query: 248 VEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
+E ++ E K +P S +N LI G+CK V+ AQ+ + M +P+ +Y
Sbjct: 125 LEEGRRILDEMVEKGLVP-SVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYN 183
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I +CR+K+ + L +M E PSV+TY ++H K ++ A ++ M +
Sbjct: 184 ELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNEN 243
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
+PD YS I L K GR+++AN +F +K++G+ N + Y +I C + ++A
Sbjct: 244 GVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDA 303
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
LL +M + C P+ TY L+ C++++++ L+ M + + TY L+
Sbjct: 304 NSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVA 363
Query: 486 LIESGKLELACSFFEEMISKGIVP 509
+++ G + A ++M+S G P
Sbjct: 364 MLKEGDFDYAHRILDQMVSSGYQP 387
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 173/376 (46%), Gaps = 31/376 (8%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T ++++ + G D A M + GV D SV +DTL K +E A +F
Sbjct: 213 SVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLF 272
Query: 256 LEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
K+ I + I+ LI G+CK K+DDA + M + P+ +Y I+ C+E
Sbjct: 273 NSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKE 332
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ ++ ++ M +KG K +V TYTI++ A+ K + A ++ ++M S PD Y
Sbjct: 333 RKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIY 392
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++ I G +K+A ++ M ++GV+P+ LTY +I + A +L++M +
Sbjct: 393 TAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFD 452
Query: 435 DLCKPDCETYAPLLKMCCRKKRM------------------------KVLNF-----LLT 465
C P TY+ L+K +++ K++ F L
Sbjct: 453 TGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFE 512
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKK 524
M ++ S + TYA L+ GL + G+L +A F+ M +G+ P + Y +L E
Sbjct: 513 KMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELG 572
Query: 525 RLGNAKERINKLLAHA 540
G+A + ++ H
Sbjct: 573 IYGDAVRLVGAMMEHG 588
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 161/339 (47%), Gaps = 13/339 (3%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDD---AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
NGY L LV +D A F M K G ++ + + L+ L + V
Sbjct: 3 NGYCKLGN-------LVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRV 55
Query: 249 EHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
+ +F + + DC P + + + +++H ++ + +A EM ++G P++ +YT
Sbjct: 56 DEGINIFKKMREDDCYP-TVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTV 114
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I C+E + L EM EKG PSV TY ++ K + A ++ + M S+
Sbjct: 115 MINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNS 174
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C P+ Y+ LI + V A + M + + P+V+TYN++I C ++A
Sbjct: 175 CNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAY 234
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+LL M E+ PD TY+ + C+K R++ N L + + + + Y +L+ G
Sbjct: 235 RLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGY 294
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
++GK++ A S + M+++ +P STY L + L K+R
Sbjct: 295 CKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKER 333
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 138/275 (50%), Gaps = 10/275 (3%)
Query: 272 LIHGWCK---------TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+++G+CK V+ A M ++G + VSYT I C + +
Sbjct: 1 MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
K+M+E C P+V TYT+++HAL ++ + EA+ ++ +M+ C P+ Y+ +I +
Sbjct: 61 IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K ++++ I ++M ++G+VP+V TYN +I C E A ++L M + C P+
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ CRKK + LL+ M ++ ++ TY SL+ G + G L+ A M
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240
Query: 503 ISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
G+VP TY + + L KK R+ A N L
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL 275
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 175/371 (47%), Gaps = 7/371 (1%)
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
+HT Y M++ + K K ++ EM E G V S+ T + ++ + G + A
Sbjct: 109 IHT---YTVMINAMCKETKLEEGRRILDEMVE--KGLVPSVPTYNALIDGYCKEGMVEAA 163
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHG 275
E M + R + L+ + +V A + + + + S +N LIHG
Sbjct: 164 QEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHG 223
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
CK +D A + + M + G PD +Y+ FI+ C++ + + ++EKG K +
Sbjct: 224 QCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKAN 283
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ YT ++ KA ++++A + ++M ++DCLP++S Y++LI L K +V++A + E
Sbjct: 284 EVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLME 343
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M ++G+ V TY +I + + + A ++L +M +PD Y + C +
Sbjct: 344 SMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRG 403
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+K +++ MF+ V DA TY ++ G L A + M G P H TY
Sbjct: 404 NIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYS 463
Query: 516 MLEEKLEKKRL 526
L + L K+ L
Sbjct: 464 CLIKHLLKEEL 474
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 188/467 (40%), Gaps = 107/467 (22%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
TP + YN+++ K + L+ M+E NG V T S + L + GR ++A
Sbjct: 211 TPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNE--NGVVPDQWTYSVFIDTLCKKGRIEEA 268
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIH 274
F +K+ G++ + + L+D K ++ A + + +DC+P +S +N LI
Sbjct: 269 NVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLP-NSSTYNALID 327
Query: 275 GWCKTRKVDDA--------QKAMK---------------------------EMFQQGFSP 299
G CK RKV +A QK +K +M G+ P
Sbjct: 328 GLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQP 387
Query: 300 DVVSYTCFIEHYCREKDFRKVDD-----------------------------------TL 324
DV YT FI +C + ++ +D L
Sbjct: 388 DVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVL 447
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAK-----------------------------QINEA 355
K M + GC PS TY+ ++ L K + + A
Sbjct: 448 KRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETA 507
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
L+++EKM C P+ + Y+ LI L K GR+ A ++F+ M ++GV P+ YN++++
Sbjct: 508 LELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNC 567
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C +A++L+ M E P E+ L + + + +++ + + D
Sbjct: 568 CCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDD 627
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
+ L+ GL+++G + M ++G + TY+ML E L+
Sbjct: 628 EVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYRMLIEGLD 674
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 2/152 (1%)
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
V A +F M K+G N ++Y +I C + + + +KM ED C P TY
Sbjct: 20 VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTV 79
Query: 447 LLKMCCRK-KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
++ +RM+ +N L + M + + TY ++ + + KLE +EM+ K
Sbjct: 80 IVHALFESGRRMEAIN-LFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEK 138
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
G+VP TY L + K+ + A + I L+
Sbjct: 139 GLVPSVPTYNALIDGYCKEGMVEAAQEILDLM 170
>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
Length = 969
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 119/483 (24%), Positives = 221/483 (45%), Gaps = 40/483 (8%)
Query: 69 LAGWVESHRLNEKSRISSRVLSENHETDVDKISKIL-----SKQYQSPDKVVEALKGCGV 123
LAG+++ +L RI S +++E + + ++ ++ Y K++ + GCG
Sbjct: 316 LAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGC 375
Query: 124 S----VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCL 179
V N + S + P+ A+ M V+ ++ C
Sbjct: 376 PPGYVVYNIFIGSIC---SGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCG 432
Query: 180 M------WELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT 232
M ++++K M + G+V +T S ++ L + + A F+ MK GV D
Sbjct: 433 MGKFDKAFQIIKLM--MRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDV 490
Query: 233 RALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
++L+D+ K +E A F +E C P S + L+H + KT++V A
Sbjct: 491 YTYTILIDSFCKVGLIEQARSWFDEMESVGCSP-SVVTYTALLHAYLKTKQVPQASDIFH 549
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM----------------QEKGCKP 334
M G +P+ ++Y+ ++ C+ + +K + +M P
Sbjct: 550 RMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAP 609
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V+TY ++ L KA ++ +A ++ + M S+ C P+ Y +LI K G++ +A E+F
Sbjct: 610 NVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVF 669
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
M K G +P V TY ++I + + A+K+L +M E C P+ TY ++ CR
Sbjct: 670 FRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRI 729
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ LL+ M K + + TY SL+ GL +SGK++++ F +MI++G P + TY
Sbjct: 730 GECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTY 789
Query: 515 KML 517
++L
Sbjct: 790 RVL 792
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 158/354 (44%), Gaps = 20/354 (5%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T + ++ ++ + A + F M G +T S L+D L K + A +V+
Sbjct: 524 SVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVY 583
Query: 256 L-----------------EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
E D I + + LI G CK KV DAQ+ + M G
Sbjct: 584 AKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCE 643
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P+ + Y I+ +C+ + M + G P+V TYT ++ A+ K ++++ A+KV
Sbjct: 644 PNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKV 703
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+M C P+ Y+++I L + G + A ++ M+K+G PNV+TY ++I
Sbjct: 704 LSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGK 763
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ + +L+L +M C P+ TY L+ CC + + LL+ M +
Sbjct: 764 SGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQG 823
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKE 531
Y S+V+G S K + EE+ S G+V Y +L + K RL A E
Sbjct: 824 YCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALE 875
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 180/379 (47%), Gaps = 21/379 (5%)
Query: 164 YNTMVDVL---GKSKKFCLMW-ELVKEMDELNNGYV-----------SLATMSTIMRRLV 208
Y+ +VD L G+S+K C ++ +++ D + + + ++ T ++ L
Sbjct: 563 YSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLC 622
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS-Q 267
+ + DA E M G E + L+D K +++A +VF C L +
Sbjct: 623 KAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVH 682
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+ LI K R++D A K + +M + +P+VV+YT I+ CR + +K L M
Sbjct: 683 TYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMM 742
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+++GC P+V+TYT ++ LGK+ +++ +L+++ +M + C P+ Y LI AG +
Sbjct: 743 EKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLL 802
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+A+ + +MK+ V Y +++ + +L LL+++E Y L
Sbjct: 803 DEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIA--SLGLLEELESHGMVSIAPVYGLL 860
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDA---GTYASLVRGLIESGKLELACSFFEEMIS 504
+ + R++ L M + S++ TY SL++ L + +LE A + E+
Sbjct: 861 IDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITR 920
Query: 505 KGIVPYHSTYKMLEEKLEK 523
KG+VP S + L + L K
Sbjct: 921 KGVVPELSAFICLIKGLIK 939
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 165/388 (42%), Gaps = 13/388 (3%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF WA+ Q GY HT YN + +VL + L++E+ E ++ V ++ I+R+
Sbjct: 123 FFLWAERQVGYSHTGACYNALAEVLHFDDRARTTERLLREIGE-DDREVLGRLLNVIVRK 181
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS 266
R G + A+E +K +G + L+ L ++ ++V E + + +
Sbjct: 182 CCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE-LGFCT 240
Query: 267 QIFNI--LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
F + CK + DA ++ ++ F D V T I F + L
Sbjct: 241 DKFTVGCFAQALCKEGRWSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFL 297
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
M+ C P+V+TY ++ K KQ+ ++ M ++ C P+ S ++SL+ A
Sbjct: 298 HRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNA 357
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE--EENALKLLQKMEEDLCKPDC- 441
A ++ M G P + YN I S C+ E + L L +K+ E++ C
Sbjct: 358 RDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCV 417
Query: 442 ---ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
A + C + ++ M + D TY+ ++ L E+ K+E A
Sbjct: 418 LNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLL 477
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKRL 526
F+EM S G++P TY +L + K L
Sbjct: 478 FQEMKSVGVIPDVYTYTILIDSFCKVGL 505
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 142/291 (48%), Gaps = 11/291 (3%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF +K GY+ T Y +++D + K ++ L +++ +M E ++ ++ T + ++
Sbjct: 669 FFRMSKC--GYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLE-SSCTPNVVTYTAMIDG 725
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPL 264
L R G A++ M+K G + + L+D L K V+ + ++F + + C P
Sbjct: 726 LCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAP- 784
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ + +LI+ C +D+A + EM Q + V Y ++ + K F L
Sbjct: 785 NYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGF--SKKFIASLGLL 842
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY-EKMKSDDCLPDTS--FYSSLIFIL 381
+E++ G Y +++ + KA ++ +AL+++ E M+ L TS Y+SLI L
Sbjct: 843 EELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQAL 902
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
A +++ A E++ ++ ++GVVP + + +I ++ AL+L M
Sbjct: 903 CLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSM 953
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 4/156 (2%)
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
+ G A E +K G P+ TYN ++ + + ++ ++M E D
Sbjct: 184 RHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELGFCTDKF 243
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
T + C++ R + L + + D +D ++ GL+E+ + A SF M
Sbjct: 244 TVGCFAQALCKEGRW---SDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRM 300
Query: 503 ISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKLL 537
+P TY+ +L L+KK+LG K I+ ++
Sbjct: 301 RCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMM 336
>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 641
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/364 (27%), Positives = 179/364 (49%), Gaps = 2/364 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++ L ++ F + E + +M E + L +TI+ + + G ++ A + M
Sbjct: 251 FNTLIAYLCRNGLFEQVHEALSQMPE-HGCTPDLRMYATIIDGICKDGHHEVANDILSRM 309
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
YG++ + + ++ L E A + E F++ PL FNIL+ +C+ V
Sbjct: 310 PSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLV 369
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D + +++M + G PDV++YT I +C+E + LK M GCKP+ I+YTIV
Sbjct: 370 DRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIV 429
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L +A++ +A ++ M CLP+ +++LI + K G V+ A E+ + M G
Sbjct: 430 LKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGC 489
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P++++Y+T+I + E AL+LL M P+ Y+ + R+ R +
Sbjct: 490 SPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQ 549
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
+ + V DA Y +++ L + + + A FF M+S G +P STY +L L
Sbjct: 550 MFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLA 609
Query: 523 KKRL 526
+ L
Sbjct: 610 SEGL 613
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/407 (24%), Positives = 176/407 (43%), Gaps = 41/407 (10%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL--ATMSTIMRRLVRGGRY 213
G TP M + +++ + F V+ + L+ +L + ++ + G
Sbjct: 138 GCAATPPMCHVILEAACRGGGF---RSAVRALQVLHAKGCTLDSGNCNLVVSAICEQGCV 194
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNIL 272
D+ VE R + +G E D + + ++ L + ++ +E + P + FN L
Sbjct: 195 DEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTL 254
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I C+ + +A+ +M + G +PD+ Y I+ C++ +D L M G
Sbjct: 255 IAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGL 314
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
KP+V+ Y V+ L A++ EA + +M +DC D ++ L+ + G V E
Sbjct: 315 KPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIE 374
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ E M + G +P+V+TY T+I+ C + A+ LL+ M CKP+ +Y +LK C
Sbjct: 375 LLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLC 434
Query: 453 RKKRM-----------------------KVLNF------------LLTHMFKNDVSMDAG 477
R +R ++NF LL M N S D
Sbjct: 435 RAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLI 494
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+Y++++ GL ++GK E A MI+KGI P Y + L ++
Sbjct: 495 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSRE 541
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 161/341 (47%), Gaps = 10/341 (2%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKD 260
I+R L G DA+ M G V+++ +G A + L K
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG 173
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
C L S N+++ C+ VD+ + ++++ G PD+VSY ++ C K + V
Sbjct: 174 CT-LDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDV 232
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHAL---GKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
++ + EM GC P+V T+ ++ L G +Q++EAL +M C PD Y+++
Sbjct: 233 EELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALS---QMPEHGCTPDLRMYATI 289
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + K G + AN+I M G+ PNV+ YNT++ C+ E A LL +M ++ C
Sbjct: 290 IDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDC 349
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
D T+ L+ C+ + + LL M ++ D TY +++ G + G ++ A
Sbjct: 350 PLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVM 409
Query: 498 FFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLL 537
+ M + G P +Y ++ + L +R +A+E I+ ++
Sbjct: 410 LLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMI 450
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 111/301 (36%), Gaps = 70/301 (23%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK--------- 319
+ LI C + DA +A+ G + VV+Y I YCR
Sbjct: 47 LSALIRSLCAAGRTADAARALD---TAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103
Query: 320 --------------------VDDTLK---EMQEKGCKP-------------------SVI 337
+ D L EM +GC S +
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163
Query: 338 TYTIVMHALG----------------KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
V+HA G + ++E +++ K+ S C PD Y++++ L
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
A R D E+ +M + G PNV T+NT+I+ C E + L +M E C PD
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
YA ++ C+ +V N +L+ M + + Y ++++GL + + E A E
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343
Query: 502 M 502
M
Sbjct: 344 M 344
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 2/175 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q G + P +NT+++ + K EL+K+M +N L + ST++ L + G+
Sbjct: 451 QQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQM-LVNGCSPDLISYSTVIDGLGKAGKT 509
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS-SQIFNIL 272
++A+E M G+ +T S + L + + ++F +D S + ++N +
Sbjct: 510 EEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAV 569
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
I CK + D A M G P+ +YT I E R+ D L E+
Sbjct: 570 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSEL 624
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 188/365 (51%), Gaps = 5/365 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA---F 220
+NT+++ L K K ++V +M ++ + ++ T +T++ + GR +A
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDM-KVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAIL 291
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKT 279
+ M + V ++ +VL+D K ++ A KVF E + + + +N L++G C
Sbjct: 292 KEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNE 351
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
K+++A+ + EM P+V++Y I YC++K + + + ++G P+VIT+
Sbjct: 352 GKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITF 411
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++H K ++ EA + + M LP+ S Y+ LI + G++++ + +M+
Sbjct: 412 NTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQC 471
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+GV + +TYN +IS+ C + E + A +L+ +M + KP TY LL C + ++
Sbjct: 472 RGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRA 531
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L M K + TY L++G GKLE A EM+ KG++P +TY++++E
Sbjct: 532 ALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKE 591
Query: 520 KLEKK 524
++ +K
Sbjct: 592 EMMEK 596
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 132/286 (46%), Gaps = 6/286 (2%)
Query: 238 LMDTLVKGNSVEHAYKVFLEFKDC---IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQ 294
++D+ VKG + +F C +S I ++L+ + + K +A K
Sbjct: 129 ILDSFVKGETNCSISLIFHSLSVCSGQFCANSIIADMLVLAYVENSKTVLGLEAFKRAGD 188
Query: 295 QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
+ V+S + +E +F V+ KEM + P++IT+ V++ L K ++N+
Sbjct: 189 YRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNK 248
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK---DANEIFEDMKKQGVVPNVLTYNT 411
A V + MK P+ Y++LI K GRV A+ I ++M + V PN +T+N
Sbjct: 249 AGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNV 308
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I C ALK+ ++M+ KP TY L+ C + ++ LL M ++
Sbjct: 309 LIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSN 368
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + TY +L+ G + LE A F+ + +G+ P T+ L
Sbjct: 369 LKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTL 414
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 3/197 (1%)
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
K SV++ ++ AL K + VY++M P+ ++++I L K G++ A +
Sbjct: 192 KLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGD 251
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALK---LLQKMEEDLCKPDCETYAPLLK 449
+ +DMK G PNV+TYNT+I C K +L++M E+ P+ T+ L+
Sbjct: 252 VVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLID 311
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ + + + M + TY SLV GL GKL A +EM+S + P
Sbjct: 312 GFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKP 371
Query: 510 YHSTYKMLEEKLEKKRL 526
TY L KK+L
Sbjct: 372 NVITYNALINGYCKKKL 388
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/307 (20%), Positives = 121/307 (39%), Gaps = 75/307 (24%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
+L+ A F ++Q G T YN++V+ L K L+ EM +N ++ T
Sbjct: 318 NLSAALKVFEEMQSQ-GLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLS-SNLKPNVIT 375
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY---KVFL 256
+ ++ + ++A E F + K G+ + + L+ K +E A+ KV L
Sbjct: 376 YNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVML 435
Query: 257 EFKDCIPLSSQ----------------------------------IFNILIHGWCKTRKV 282
E K +P +S +NILI WC+ ++
Sbjct: 436 E-KGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEP 494
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A + + EM +G P ++Y + YC E + R + K+M+++G +V+TY ++
Sbjct: 495 KKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVL 554
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ + G+++DAN + +M ++G+
Sbjct: 555 IQG-----------------------------------YCRKGKLEDANGLLNEMLEKGL 579
Query: 403 VPNVLTY 409
+PN TY
Sbjct: 580 IPNRTTY 586
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 177/370 (47%), Gaps = 39/370 (10%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDC 261
++R V+ + + EAFR +K G+ A + L+ LVK V+ A++++ E +
Sbjct: 190 LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSG 249
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ ++ NI+I+ CK +K+++ + + +M ++G PDVV+Y I YCR+ +
Sbjct: 250 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 309
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQ-------INEALKV---------------- 358
+ + M KG KP V TY +++ L K + ++E LK+
Sbjct: 310 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC 369
Query: 359 ------------YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
+++M S +PD +S+LI +LSK G + A + F DMK G+ P+
Sbjct: 370 CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 429
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+ Y +I C ALK+ +M E C D TY +L C++K + + L T
Sbjct: 430 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTE 489
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
M + V D T+ +L+ G + G + A + FE MI + + P TY L + K
Sbjct: 490 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK--- 546
Query: 527 GNAKERINKL 536
G+ E++N+L
Sbjct: 547 GSEMEKVNEL 556
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 169/355 (47%), Gaps = 2/355 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ L K+ K+ ++ EM ++ AT + ++ R DA F M
Sbjct: 327 YNAIINGLCKTGKYLRAKGVLDEMLKIGMS-PDTATYNILLVECCRNDNMMDAERIFDEM 385
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKV 282
GV D + S L+ L K ++ A K F + K+ + + I+ ILI G+C+ +
Sbjct: 386 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 445
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A K EM +QG DVV+Y + C+EK + D+ EM E+G P T+T +
Sbjct: 446 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 505
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K +N+A+ ++E M + PD Y++LI K ++ NE++ DM + +
Sbjct: 506 INGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 565
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN ++Y +I+ C A +L +M E + T ++K CR +
Sbjct: 566 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 625
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L++M + D TY +L+ G I+ ++ A + +M + G++P TY ++
Sbjct: 626 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 680
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 90/359 (25%), Positives = 174/359 (48%), Gaps = 12/359 (3%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
N+++ L K L WE+ +E+ + +G V++ T++ ++ L + + ++ M
Sbjct: 223 NSLLGGLVKVGWVDLAWEIYQEV--VRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDM 280
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-----FKDCIPLSSQIFNILIHGWCK 278
++ GV D + L++ + +E A+++ K C+ +N +I+G CK
Sbjct: 281 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCV----FTYNAIINGLCK 336
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
T K A+ + EM + G SPD +Y + CR + + EM +G P +++
Sbjct: 337 TGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVS 396
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
++ ++ L K +++ALK + MK+ PD Y+ LI + G + +A ++ ++M
Sbjct: 397 FSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEML 456
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+QG V +V+TYNT+++ C A +L +M E PD T+ L+ + M
Sbjct: 457 EQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMN 516
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M + ++ D TY +L+ G + ++E + +MIS+ I P H +Y +L
Sbjct: 517 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGIL 575
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 155/350 (44%), Gaps = 38/350 (10%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L + S ++ L + G D A++ FR MK G+ D ++L+ + + A KV
Sbjct: 394 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 453
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E + C+ L +N +++G CK + + +A + EM ++G PD ++T I Y ++
Sbjct: 454 EMLEQGCV-LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKD 512
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ K + M ++ KP V+TY ++ K ++ + +++ M S P+ Y
Sbjct: 513 GNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISY 572
Query: 375 SSLI------------FIL-----------------------SKAGRVKDANEIFEDMKK 399
LI F L +AG A+E +M
Sbjct: 573 GILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLL 632
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+VP+ +TYNT+I+ + A L+ KME PD TY +L R+ RM+
Sbjct: 633 KGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQE 692
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
++ M + V+ D TY SL+ G + L+ A +EM+ +G VP
Sbjct: 693 AELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 2/278 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ L K K EL EM E + T +T++ + G + AV F M
Sbjct: 467 YNTILNGLCKEKMLSEADELFTEMTE-RGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 525
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
+ ++ D + L+D KG+ +E +++ + + I + ILI+G+C V
Sbjct: 526 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCV 585
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A + EM ++GF +++ ++ YCR + K D+ L M KG P ITY +
Sbjct: 586 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 645
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K + ++ A + KM++ LPD Y+ ++ S+ GR+++A I M ++GV
Sbjct: 646 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 705
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
P+ TY ++I+ ++ + A ++ +M + PD
Sbjct: 706 NPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 114/253 (45%), Gaps = 18/253 (7%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
S Q F+ +IH ++R++ DAQ + M ++ V + Y
Sbjct: 131 SLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTY------------- 177
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
C + + + +++ +A+++ E + + +KS + +SL+ L K
Sbjct: 178 -----GNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKV 232
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G V A EI++++ + GV NV T N MI++ C + EN L MEE PD TY
Sbjct: 233 GWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTY 292
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ CR+ ++ L+ M + TY +++ GL ++GK A +EM+
Sbjct: 293 NTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLK 352
Query: 505 KGIVPYHSTYKML 517
G+ P +TY +L
Sbjct: 353 IGMSPDTATYNIL 365
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 36/228 (15%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDE------------LNNGYVSLATMSTIMRRLVRGG 211
YNT++D K + + EL +M L NGY ++ +S
Sbjct: 537 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS---------- 586
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG-----NSVE-HAYKVFLEFKDCIPLS 265
EAFR + VEK A + +T+VKG N+V+ + + K +P
Sbjct: 587 ------EAFRLWDEM-VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP-D 638
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+N LI+G+ K +D A + +M G PDV++Y + + R+ ++ + +
Sbjct: 639 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIML 698
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+M E+G P TYT +++ + EA +V+++M +PD F
Sbjct: 699 KMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 746
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 155 bits (391), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 99/359 (27%), Positives = 173/359 (48%), Gaps = 17/359 (4%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
VS AT S ++ LV+ G A + G D + +++ L K ++ A +
Sbjct: 222 VSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVAL 281
Query: 255 F--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ C P + +N L++G CK ++++A ++++ G +PDVV+YT I+
Sbjct: 282 MEKITANGCTP-TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLG 340
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+EK + KEM +G + YT ++ L + +I +A VY+ M S C+PD
Sbjct: 341 KEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVV 400
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
S++I LSKAGR+ A IF+ M+ +G+ PN + Y+ +I C + + AL++L +M
Sbjct: 401 TLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 460
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
++ C PD TY L+ C+ ++ M + D TY L+ GL ++G
Sbjct: 461 KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNT 520
Query: 493 ELACSFFEEMISKGIVPYHSTYK------------MLEEKLEKKRLGNAKERINKLLAH 539
+ AC ++M S V Y S ML ++E+ + N++ R +L+ H
Sbjct: 521 DAACGVLDDMSSSRFV-YSSLVDGLCKSGKLEGGCMLFHEMERSGVANSQTR-TRLIFH 577
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 181/405 (44%), Gaps = 39/405 (9%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G+ H+ N ++DV ++K+ L+K +EL + + T + ++ +
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLK--NELATIFRPDVETWNVLITGYCLAREPE 171
Query: 215 DAVEAFRGMKK-YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
+A R M++ +GV + ++++ L K V A F + +P+S+ F+ILI
Sbjct: 172 EAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILI 231
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+G K + A +E G + D+ +YT + + K ++ ++++ GC
Sbjct: 232 NGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCT 291
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK---------- 383
P++ TY +++ L K ++ EA+ + K+ + C PD Y+SLI L K
Sbjct: 292 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 351
Query: 384 -------------------------AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
G++ A+ +++ M G VP+V+T +TMI
Sbjct: 352 FKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 411
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
A+++ + ME P+ Y+ L+ C+ ++M +L M K + D T
Sbjct: 412 AGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 471
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
Y L+ GL +SG +E A +FF+EM+ G P TY +L L K
Sbjct: 472 YNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCK 516
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 106/392 (27%), Positives = 178/392 (45%), Gaps = 40/392 (10%)
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDEL--NNGYVSLATMSTIMRRLVRGGRYDD 215
+HT Y +V+ L K+KK + E V M+++ N ++AT + ++ L + GR ++
Sbjct: 259 IHT---YTAIVNWLAKNKK---IQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEE 312
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIH 274
A++ R + G D + L+D L K AYK+F E + L + + LI
Sbjct: 313 AIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIR 372
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G +T K+ A K M G PDVV+ + I+ + K M+ +G P
Sbjct: 373 GLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP 432
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ + Y+ ++H L KA++++ AL++ +MK C PDT Y+ LI L K+G V+ A F
Sbjct: 433 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 492
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME----------EDLCK------ 438
++M + G P+V TYN +IS C + A +L M + LCK
Sbjct: 493 DEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEG 552
Query: 439 -------------PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
+ +T L+ C+ R+ L + K + Y S++
Sbjct: 553 GCMLFHEMERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHPYA-YNSIISA 611
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LI+SGK+ + ++EM ++ P TY L
Sbjct: 612 LIKSGKVNEGQAVYQEM-TRWWKPDRVTYNAL 642
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 179/399 (44%), Gaps = 77/399 (19%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM--STIMRRLVRGGRYDD 215
TP++ Y +++D LGK K+ ++L KEM ++L T+ + ++R L++ G+
Sbjct: 326 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRG---LALDTVCYTALIRGLLQTGKIPQ 382
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILI 273
A ++ M +G D LS ++D L K + A ++F +E + P + +++ LI
Sbjct: 383 ASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP-NEVVYSALI 441
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
HG CK RK+D A + + +M + +PD ++Y I+ C+ D EM E GCK
Sbjct: 442 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 501
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSD-------------------DCL------ 368
P V TY I++ L KA + A V + M S C+
Sbjct: 502 PDVYTYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEME 561
Query: 369 ----PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
++ + LIF L KA RV +A +F ++K+G +P+ YN++IS+ +
Sbjct: 562 RSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKVNE 620
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
+ Q+M KPD TY LL
Sbjct: 621 GQAVYQEMTR-WWKPDRVTYNALLN----------------------------------- 644
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHST-YKMLEEKLE 522
G+I + +++ A ++ EM +G VP S +K+ +++L+
Sbjct: 645 GMIGANRMDRAHYYYLEMTGRGYVPPVSILHKLADDRLK 683
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 84/170 (49%), Gaps = 7/170 (4%)
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++L+ + ++ R ++A + ++ P+V T+N +I+ C E E A ++++MEE
Sbjct: 123 NALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEE 182
Query: 435 DL-CKPDCETYAPLLKMCCRKKRMKVLNFLLTHM--FKNDVSMDAGTYASLVRGLIESGK 491
D P +T+ +L C K KVL + H + + + A T++ L+ GL+++G
Sbjct: 183 DFGVAPSLKTHNLVLHGLC--KSGKVLA-AMDHFEAVRRSMPVSAATFSILINGLVKAGM 239
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHA 540
+ A S +E + G TY + L K K++ A + K+ A+
Sbjct: 240 MIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANG 289
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 155 bits (391), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 172/345 (49%), Gaps = 2/345 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+V L K ++F + E++ EM L S A +S+++ L + G+ ++A+ + +
Sbjct: 300 YCTLVCGLCKVQEFEVGLEMIDEMLRLRFS-PSEAAVSSLVEGLRKRGKVEEALNLVKRV 358
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
++GV + + L+D+L KG + + A +F K + + ++ILI +C+ K+
Sbjct: 359 AEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKL 418
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D A + EM G P V Y I +C+ D + + EM K +P+V+TYT +
Sbjct: 419 DTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSL 478
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
M +IN+AL++Y +M +P +++L+ L +AG ++DA ++F +M + V
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNV 538
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN +TYN MI C A + L +M E PD +Y PL+ C +
Sbjct: 539 KPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + K + ++ Y L+ G GKLE A S ++M +G+
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGV 643
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 168/389 (43%), Gaps = 71/389 (18%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T +T++ L R G DAV+ F M ++ V+ + +V+++ + ++ A++
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFL 565
Query: 256 LEF--KDCIP----------------------------------LSSQIFNILIHGWCKT 279
E K +P L+ + L+HG+C+
Sbjct: 566 NEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
K+++A ++M +G D+V Y I+ + KD + LKEM ++G KP + Y
Sbjct: 626 GKLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIY 685
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA--------- 390
T ++ A K EA +++ M ++ C+P+ Y+++I L KAG V +A
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRP 745
Query: 391 -----NEI------------FEDMKK---------QGVVPNVLTYNTMISSACARSEEEN 424
N++ DMKK +G++ N TYN +I C + E
Sbjct: 746 GNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEE 805
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A +L+ +M D PDC TY ++ CR+ +K L M + + D Y +L+
Sbjct: 806 ASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIH 865
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHST 513
G +G++ A EM+ +G+ P T
Sbjct: 866 GCCVAGEMGKATELRNEMLRQGLKPNTET 894
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/334 (26%), Positives = 154/334 (46%), Gaps = 11/334 (3%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T+S ++ LV+ + A+E F M G+ D + ++ +L + + A ++ ++
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQM 253
Query: 259 K------DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ + +P +N+LI G CK +KV +A K++ + PDVV+Y + C
Sbjct: 254 EATGCDVNIVP-----YNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLC 308
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ ++F + + EM PS + ++ L K ++ EAL + +++ P+
Sbjct: 309 KVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIF 368
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y++LI L K +A +F+ M K G+ PN +TY+ +I C R + + AL L +M
Sbjct: 369 VYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ KP Y L+ C+ + L+ M + TY SL+ G GK+
Sbjct: 429 IDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
A + EM KGIVP T+ L L + L
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGL 522
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 166/368 (45%), Gaps = 4/368 (1%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
+++V+ L K K LVK + E ++ + ++ L +G +D+A F M
Sbjct: 336 SSLVEGLRKRGKVEEALNLVKRVAEFGVS-PNIFVYNALIDSLCKGRNFDEAELLFDRMG 394
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVD 283
K G+ + S+L+D + ++ A E D + S +N LI+G CK +
Sbjct: 395 KIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDIS 454
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A+ M EM + P VV+YT + YC + K EM KG PS+ T+T ++
Sbjct: 455 AAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLL 514
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
L +A I +A+K++ +M + P+ Y+ +I + G + A E +M ++G+V
Sbjct: 515 SGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIV 574
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P+ +Y +I C + A + + + C+ + Y LL CR+ +++ +
Sbjct: 575 PDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSV 634
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
M V +D Y L+ G ++ ++ +EM +G+ P Y + + K
Sbjct: 635 CQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDA--K 692
Query: 524 KRLGNAKE 531
+ G+ KE
Sbjct: 693 SKTGDFKE 700
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/358 (26%), Positives = 152/358 (42%), Gaps = 43/358 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFR 221
YN ++D L K +K +WE V +L + + T T++ L + ++ +E
Sbjct: 265 YNVLIDGLCKKQK---VWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMID 321
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NILIHGWCKT 279
M + A+S L++ L K VE A + + +S IF N LI CK
Sbjct: 322 EMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAE-FGVSPNIFVYNALIDSLCKG 380
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
R D+A+ M + G P+ V+Y+ I+ +CR L EM + G KPSV Y
Sbjct: 381 RNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPY 440
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+++ K I+ A + +M + P Y+SL+ G++ A ++ +M
Sbjct: 441 NSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+VP++ T+ T++S +A+KL +M E KP
Sbjct: 501 KGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKP-------------------- 540
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
N V TY ++ G E G + A F EMI KGIVP +Y+ L
Sbjct: 541 ----------NRV-----TYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPL 583
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 95/230 (41%), Gaps = 38/230 (16%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M G++ D + ++D K + A+ ++ + + C+P + + +I+G CK
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP-NEVTYTAVINGLCKAG 731
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCF--------------------------------- 307
V++A+ +M P+ V+Y CF
Sbjct: 732 FVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVELHNAILKGLLANTATYN 791
Query: 308 --IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I +CR+ + + + M G P ITYT ++ L + + +A++++ M
Sbjct: 792 MLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEK 851
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
PD Y++LI AG + A E+ +M +QG+ PN T T IS+
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTETSETTISN 901
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 112/389 (28%), Positives = 182/389 (46%), Gaps = 20/389 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDE--LNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YN M++ S ++ +L++EM E +N V T S ++ V+ G++ +A E +
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQEMLERKINPDVV---TFSALINAFVKEGKFFEAEELYD 347
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL--EFKDCIPLSSQIFNILIHGWCKT 279
M + T S ++D K N ++ A +F K C P FN LI G+C+
Sbjct: 348 EMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSP-DIITFNTLIAGYCRA 406
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++VDD K + EM + G + ++YT I +C+ D D L+EM G P+V+T
Sbjct: 407 KRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTC 466
Query: 340 TIVMHAL---GKAKQINEALKVYEKMKSD--------DCLPDTSFYSSLIFILSKAGRVK 388
++ L GK K E K +K K D PD Y+ LI L G+
Sbjct: 467 NTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFL 526
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A E++E+M +G+VP+ +TY++MI C +S + A ++ M PD T+ L+
Sbjct: 527 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLI 586
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+ + L M + + DA TY +L+ G + ++ A F+EMIS G+
Sbjct: 587 TGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVY 646
Query: 509 PYHSTYK-MLEEKLEKKRLGNAKERINKL 536
P T + ML K+ L A + L
Sbjct: 647 PDTITIRNMLTGLWSKEELERAVAMLEDL 675
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/371 (27%), Positives = 175/371 (47%), Gaps = 21/371 (5%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YNT++D L K + L EM E + + T + ++ GR+ DA + +
Sbjct: 255 IYNTIIDGLWKDGRHSDAHNLFIEMQE-KEIFPDIVTYNCMINGFCISGRWSDAEQLLQE 313
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M + + D S L++ VK A +++ E + IP S+ ++ +I G+CK
Sbjct: 314 MLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIP-STVTYSSMIDGFCKQN 372
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKPSVI 337
++D A+ +G SPD++++ I YCR K +VDD +K EM E G + I
Sbjct: 373 RLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAK---RVDDGIKLLHEMTEAGLVANTI 429
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYT ++H + +N A + ++M S P+ ++L+ L G++KDA E+F+ M
Sbjct: 430 TYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 489
Query: 398 KK-----------QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+K GV P+V TYN +I + A +L ++M PD TY+
Sbjct: 490 QKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSS 549
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++ C++ R+ + M S D T+ +L+ G ++G ++ F EM +G
Sbjct: 550 MIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRG 609
Query: 507 IVPYHSTYKML 517
IV TY L
Sbjct: 610 IVADAITYITL 620
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/362 (27%), Positives = 175/362 (48%), Gaps = 10/362 (2%)
Query: 145 FGFFTWAK-TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
F T+ K T+ G+ T +NT++ L + +L +M + N + T +T+
Sbjct: 134 FALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCKPN-----VVTFTTL 188
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVE--HAYKVFLEFKD 260
M L R GR +AV M + G++ + ++D + K G++V + + E
Sbjct: 189 MNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSH 248
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
IP + I+N +I G K + DA EM ++ PD+V+Y C I +C +
Sbjct: 249 IIP-NVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDA 307
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+ L+EM E+ P V+T++ +++A K + EA ++Y++M +P T YSS+I
Sbjct: 308 EQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDG 367
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
K R+ A +F +G P+++T+NT+I+ C ++ +KLL +M E +
Sbjct: 368 FCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVAN 427
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ C+ + LL M + V + T +L+ GL ++GKL+ A F+
Sbjct: 428 TITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFK 487
Query: 501 EM 502
M
Sbjct: 488 AM 489
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 174/368 (47%), Gaps = 16/368 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+VD + K L+++M+E+++ ++ +TI+ L + GR+ DA F M
Sbjct: 220 YGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEM 279
Query: 224 KKYGVEKDTRALSVLMDTLV---KGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTR 280
++ + D + +++ + + E + LE K I F+ LI+ + K
Sbjct: 280 QEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERK--INPDVVTFSALINAFVKEG 337
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K +A++ EM + P V+Y+ I+ +C++ + KGC P +IT+
Sbjct: 338 KFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFN 397
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ +AK++++ +K+ +M + +T Y++LI + G + A ++ ++M
Sbjct: 398 TLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISS 457
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEE-----------DLCKPDCETYAPLLK 449
GV PNV+T NT++ C + ++AL++ + M++ + +PD +TY L+
Sbjct: 458 GVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILIC 517
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ + L M + D TY+S++ GL + +L+ A F+ M SK P
Sbjct: 518 GLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSP 577
Query: 510 YHSTYKML 517
T+ L
Sbjct: 578 DVVTFNTL 585
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 132/271 (48%), Gaps = 6/271 (2%)
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+P ++ F IL+ +C K+ A ++ + GF P VV++ + C E +
Sbjct: 112 MPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL 171
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D +M CKP+V+T+T +M+ L + ++ EA+ + ++M D P+ Y +++ +
Sbjct: 172 DLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGM 227
Query: 382 SKAGRVKDANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
K G A + M++ ++PNV+ YNT+I +A L +M+E PD
Sbjct: 228 CKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPD 287
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY ++ C R LL M + ++ D T+++L+ ++ GK A ++
Sbjct: 288 IVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYD 347
Query: 501 EMISKGIVPYHSTY-KMLEEKLEKKRLGNAK 530
EM+ + I+P TY M++ ++ RL A+
Sbjct: 348 EMLPRSIIPSTVTYSSMIDGFCKQNRLDAAE 378
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 131/283 (46%), Gaps = 28/283 (9%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGG 211
T+ G + Y T++ + +L++EM +++G ++ T +T++ L G
Sbjct: 420 TEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEM--ISSGVCPNVVTCNTLLDGLCDNG 477
Query: 212 RYDDAVEAFRGMKKYGVEKD-TRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
+ DA+E F+ M+K ++ D +R N VE Q +N
Sbjct: 478 KLKDALEMFKAMQKSKMDIDASRPF----------NGVEP--------------DVQTYN 513
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
ILI G K +A++ +EM +G PD ++Y+ I+ C++ + M K
Sbjct: 514 ILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 573
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P V+T+ ++ KA +++ L+++ +M + D Y +LI+ K + A
Sbjct: 574 SFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGA 633
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+IF++M GV P+ +T M++ ++ E E A+ +L+ ++
Sbjct: 634 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQ 676
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 93/371 (25%), Positives = 183/371 (49%), Gaps = 2/371 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ L K + +L++ +D N ++ +TI+ + + ++A + F M
Sbjct: 193 YGTLIHGLCKVGETRAALDLLQRVDG-NLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
G+ D S L+ ++ A +F + + I FNIL++ +CK K+
Sbjct: 252 VSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKM 311
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ + M +QG P+ V+Y ++ YC K+ K M + G P + +Y+I+
Sbjct: 312 KEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIM 371
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K K+ +EA+ ++++M + +PD YSSLI LSK+GR+ A ++ + M +GV
Sbjct: 372 INGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGV 431
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN+ TYN+++ + C + + A+ LL K ++ +PD TY+ L+K C+ +++
Sbjct: 432 PPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARK 491
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
+ + ++D Y +++G G A + +M G +P TY+++ L
Sbjct: 492 VFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLF 551
Query: 523 KKRLGNAKERI 533
KK + E++
Sbjct: 552 KKDENDMAEKL 562
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 168/347 (48%), Gaps = 4/347 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
MYNT++D + K K ++L EM ++ G + T S ++ G+ DA++ F
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEM--VSKGISPDVVTYSALISGFCILGKLKDAIDLFN 284
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTR 280
M ++ D ++L++ K ++ VF + K I + +N L+ G+C +
Sbjct: 285 KMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVK 344
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+V+ A+ M Q G +PD+ SY+ I +C+ K F + + KEM K P V+TY+
Sbjct: 345 EVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYS 404
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L K+ +I+ AL++ ++M P+ Y+S++ L K +V A + K +
Sbjct: 405 SLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDK 464
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P++ TY+ +I C + E+A K+ + + D Y +++ C +
Sbjct: 465 GFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEA 524
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
LL+ M N DA TY ++ L + + ++A EMI++G+
Sbjct: 525 LALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 157/336 (46%), Gaps = 2/336 (0%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
I+ LV+ Y + + M+ G++ + ++L++ + + A+ VF +
Sbjct: 91 ILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMG 150
Query: 263 PLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ I F L G C ++ A ++ GF D +SY I C+ + R
Sbjct: 151 YVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAAL 210
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D L+ + +P+V+ Y ++ ++ K K +NEA ++ +M S PD YS+LI
Sbjct: 211 DLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGF 270
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
G++KDA ++F M + + P+V T+N ++++ C + + + M + KP+
Sbjct: 271 CILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNF 330
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ C K + + M + V+ D +Y+ ++ G + K + A + F+E
Sbjct: 331 VTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKE 390
Query: 502 MISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
M K I+P TY L + L K R+ A + ++++
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 107/211 (50%), Gaps = 2/211 (0%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
Q G + Y+ M++ K KKF L KEM N + T S+++ L + GR
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR-KNIIPDVVTYSSLIDGLSKSGR 415
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNI 271
A++ M GV + + ++D L K + V+ A + +FKD ++I
Sbjct: 416 ISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSI 475
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G C++ K++DA+K +++ +G++ DV +YT I+ +C E F + L +M++ G
Sbjct: 476 LIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKM 362
C P TY I++ +L K + + A K+ +M
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 120/261 (45%), Gaps = 5/261 (1%)
Query: 262 IPLSSQIFNILIHGWCKT-----RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
IP SS N + + T VDDA + ++ +P + + + K
Sbjct: 41 IPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKH 100
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ V ++M+ +G KP+++ I+++ + I A V+ K+ +PDT +++
Sbjct: 101 YHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTT 160
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L L G+++ A + + G + ++Y T+I C E AL LLQ+++ +L
Sbjct: 161 LSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNL 220
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+P+ Y ++ C+ K + L + M +S D TY++L+ G GKL+ A
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAI 280
Query: 497 SFFEEMISKGIVPYHSTYKML 517
F +MI + I P T+ +L
Sbjct: 281 DLFNKMILENIKPDVYTFNIL 301
>gi|242094080|ref|XP_002437530.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
gi|241915753|gb|EER88897.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
Length = 540
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 105/343 (30%), Positives = 166/343 (48%), Gaps = 20/343 (5%)
Query: 205 RRLVRGGRYDDAVEAFRGMKK----YGVEKDTRA---------LSVLMDTLVKGNSVEHA 251
RR R GR D A AFR +++ Y VE D A L + +D L K A
Sbjct: 107 RRYARLGRTDSAARAFRFLQRHPGCYAVESDDGAPAAEAAVSPLILTVDALCKEGHPRAA 166
Query: 252 YKVFLEFK----DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
++ + + P +++NIL++GW + R++D +K M +G P VV+Y F
Sbjct: 167 ARLVAQVRREDGGWAP-DVRVYNILLNGWSRARRLDKVEKLWAAMRDEGVRPTVVTYGTF 225
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I+ YC + + L +M+E+G + +++T +++AL +A + +A KV EK
Sbjct: 226 IDAYCVMRRPDQAMTLLDQMREEGIQANLLTCNPIVYALAQAGRFGDAHKVLEKFPLYGV 285
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P+ S ++SL+F K G + A+ + + M +G+ P TYN E +
Sbjct: 286 SPNISTFNSLVFGYCKHGDLAGASGVLKAMLGRGISPTARTYNYFFMVFSRNRSIELGMN 345
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L KM + PD TY L+KM C R+++ +L M N D T L+ L
Sbjct: 346 LYVKMVSNGYAPDQFTYHLLIKMLCEANRLELTLQMLQEMRNNGFEPDQATSTMLIHLLC 405
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
E A + FE+M +GIVP + TY+ML ++L KRLG K
Sbjct: 406 RRHHFEEAFAEFEQMFERGIVPQYITYRMLMKEL--KRLGLVK 446
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 122/302 (40%), Gaps = 2/302 (0%)
Query: 168 VDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
VD L K LV ++ + G+ + + ++ R R D + + M+
Sbjct: 154 VDALCKEGHPRAAARLVAQVRREDGGWAPDVRVYNILLNGWSRARRLDKVEKLWAAMRDE 213
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDA 285
GV +D + A + + ++ I + N +++ + + DA
Sbjct: 214 GVRPTVVTYGTFIDAYCVMRRPDQAMTLLDQMREEGIQANLLTCNPIVYALAQAGRFGDA 273
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
K +++ G SP++ ++ + YC+ D LK M +G P+ TY
Sbjct: 274 HKVLEKFPLYGVSPNISTFNSLVFGYCKHGDLAGASGVLKAMLGRGISPTARTYNYFFMV 333
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
+ + I + +Y KM S+ PD Y LI +L +A R++ ++ ++M+ G P+
Sbjct: 334 FSRNRSIELGMNLYVKMVSNGYAPDQFTYHLLIKMLCEANRLELTLQMLQEMRNNGFEPD 393
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
T +I C R E A ++M E P TY L+K R +K++ L
Sbjct: 394 QATSTMLIHLLCRRHHFEEAFAEFEQMFERGIVPQYITYRMLMKELKRLGLVKLVQKLAD 453
Query: 466 HM 467
M
Sbjct: 454 LM 455
>gi|357117116|ref|XP_003560320.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Brachypodium distachyon]
Length = 598
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 145/287 (50%), Gaps = 8/287 (2%)
Query: 244 KGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
K V A ++ E + +PLS + + L++GWC+ K+D+A+ + M G +PDVV
Sbjct: 169 KTGHVAAAERLVEELQPRLPLSIRHYTALLYGWCRLGKLDEAKHVLARMKAAGVAPDVVV 228
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
+ + + F + +EM+ + C P+ ++YT +M LG +++E ++V+ +M+
Sbjct: 229 FNTLLAGFVAADRFEDAFELAREMERRDCPPNAVSYTTLMQGLGSRGRVDEVMRVFVEMR 288
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
C PD+ Y +L+ KAGR+ E + M + + + Y + + + E
Sbjct: 289 RKGCAPDSVTYGTLVSAFCKAGRLSQGYEFLDAMSRDALRVDPGVYLGFFVAHEKKEQLE 348
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
L+L+++M E C PD Y +L++ C+ K L M + +S T+A +V
Sbjct: 349 ECLELMERMRECRCPPDLGIYNVVLRLSCKLGETKQAMALWNEMENSGLSPGVDTFAIMV 408
Query: 484 RGLIESGKLELACSFFEEMISKG--IVPYHSTYKML------EEKLE 522
GL+ G L ACSFF++M+ +G + P + K L +EKLE
Sbjct: 409 NGLVGQGSLVDACSFFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLE 455
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/329 (19%), Positives = 126/329 (38%), Gaps = 75/329 (22%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+S+ + ++ R G+ D+A MK GV D + L+ V + E A+++
Sbjct: 189 LSIRHYTALLYGWCRLGKLDEAKHVLARMKAAGVAPDVVVFNTLLAGFVAADRFEDAFEL 248
Query: 255 F--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+E +DC P ++ + L+ G +VD+ + EM ++G +PD V+Y + +C
Sbjct: 249 AREMERRDCPP-NAVSYTTLMQGLGSRGRVDEVMRVFVEMRRKGCAPDSVTYGTLVSAFC 307
Query: 313 R--------------EKDFRKVD---------------------DTLKEMQEKGCKPSVI 337
+ +D +VD + ++ M+E C P +
Sbjct: 308 KAGRLSQGYEFLDAMSRDALRVDPGVYLGFFVAHEKKEQLEECLELMERMRECRCPPDLG 367
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y +V+ K + +A+ ++ +M++ P ++ ++ L G + DA F+DM
Sbjct: 368 IYNVVLRLSCKLGETKQAMALWNEMENSGLSPGVDTFAIMVNGLVGQGSLVDACSFFKDM 427
Query: 398 KKQG--VVP-----------------------------------NVLTYNTMISSACARS 420
+G V P NV + I + A+
Sbjct: 428 VGRGLFVAPQYGVLKDLLNALVRDEKLELAKDVWGCIVSRGCELNVGAWTIWIHALYAKK 487
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLK 449
++A M E P +T+A L+K
Sbjct: 488 HVKDACSYCLDMLEAGLMPQPDTFAKLMK 516
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 154 bits (390), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 206/461 (44%), Gaps = 68/461 (14%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
+ +D+T A +F + HTP Y M++ L ++ + L+++M +L
Sbjct: 51 KHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQM-KLEGISC 109
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S +++ R G + A++ F M+ + V+ + + ++D L+ N + ++
Sbjct: 110 SEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIY 169
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT--------- 305
KD + + +NIL+ CK +VD A K + EM +G PD VSYT
Sbjct: 170 SNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKL 229
Query: 306 ---------------------CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
I C+E F + L EM KG P+VI+YT +++
Sbjct: 230 GKVKEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIIN 289
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
AL A + +L V KM + C P+ ++SLI G +A + ++ M ++GVVP
Sbjct: 290 ALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVP 349
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM----KVL 460
NV+ YN ++ C++ +A+ + +ME + C P+ TY+ L+ + + +V
Sbjct: 350 NVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVW 409
Query: 461 NFLLTH--------------------MFKNDVSM-----------DAGTYASLVRGLIES 489
N+++TH MF + + T+ + ++GL S
Sbjct: 410 NWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469
Query: 490 GKLELACSFFEEMISKGIVPYHSTY-KMLEEKLEKKRLGNA 529
G+++ A F++M + G P +TY ++L+ L+ +R G A
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEA 510
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 166/328 (50%), Gaps = 3/328 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T +++++ G +A++ + M + GV + A + LM L S+ A VF
Sbjct: 315 NLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVF 374
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+E C P + + ++ LI G+ K +D A + M G P+VV+YTC ++ CR
Sbjct: 375 NQMEINGCCP-NVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCR 433
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
F + ++ MQ + C P+ +T+ + L + +++ A+KV+++M + C P+T+
Sbjct: 434 NSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ L+ L K R +A + +DM+ +G+ N++TYNT+I C AL+LL KM
Sbjct: 494 YNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMV 553
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
KPD T ++ C++ ++ + L+ + D Y SL+ G+ +E
Sbjct: 554 VRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVE 613
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKL 521
A + M+S+GI P +T+ +L L
Sbjct: 614 EAIVYLRRMLSEGISPNVATWNVLVRHL 641
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 125/292 (42%), Gaps = 36/292 (12%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
+ DL A + W T G Y MVDVL ++ F + L++ M ++ N +
Sbjct: 399 AGDLDGASEVWNWMITH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM-QVENCPPNT 456
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T +T ++ L GR D A++ F M G +T + L+D+L+
Sbjct: 457 VTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLL-------------- 502
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K R+ +A +K+M +G ++V+Y I YC
Sbjct: 503 --------------------KDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + L +M +G KP IT IV+ A K ++N A+++ +++ + PD Y+SL
Sbjct: 543 GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSL 602
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
I + V++A M +G+ PNV T+N ++ + A++ L
Sbjct: 603 ISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFL 654
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 3/200 (1%)
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF-YSSLIFILSKAGRVKDAN 391
K SV+ V+ L I AL+ ++ + + T Y +I L+ +
Sbjct: 37 KSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQ 96
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ + MK +G+ + + ++I S E ALK +M++ KP + Y +L
Sbjct: 97 YLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDAL 156
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
+ R +++N + ++M K+ + + TY L++ L ++ +++ A EM SKG P
Sbjct: 157 LDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDE 216
Query: 512 STYKMLEEKLEKKRLGNAKE 531
+Y L L K LG KE
Sbjct: 217 VSYTTLISSLCK--LGKVKE 234
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 187/372 (50%), Gaps = 7/372 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G H YN +++ L + +F + +V +M + GY + T+S+++ +G R
Sbjct: 40 GIGHDLYSYNIVINCLCRCSRFVIALSVVGKM--MKFGYEPDVVTVSSLINGFCQGNRVF 97
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILI 273
DA++ M++ G D + ++D K V A ++F +D + + +N L+
Sbjct: 98 DAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLV 157
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G C + + DA + M++M + P+V+++T I+ + +E F + +EM +
Sbjct: 158 AGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVD 217
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P V TY +++ L +++EA ++ + M + CLPD Y++LI K+ RV + ++
Sbjct: 218 PDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKL 277
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
F +M ++G+V + +TYNT+I + A ++ +M+ +P+ TY+ LL C
Sbjct: 278 FREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCM 334
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
R++ L +M K+++ +D TY ++ G+ + G +E A F + KG+ P +
Sbjct: 335 NWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVS 394
Query: 514 YKMLEEKLEKKR 525
Y + +KR
Sbjct: 395 YTTMISGFCRKR 406
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 161/328 (49%), Gaps = 14/328 (4%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV- 254
S+ S ++ ++ + YD + F M+ G+ D + +++++ L + + A V
Sbjct: 9 SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 68
Query: 255 --FLEFK---DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
++F D + +SS LI+G+C+ +V DA + +M + GF PDVV Y I+
Sbjct: 69 GKMMKFGYEPDVVTVSS-----LINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIID 123
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
C+ + M+ G + +TY ++ L + + ++A ++ M D +P
Sbjct: 124 GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVP 183
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ ++++I + K G+ +A +++E+M ++ V P+V TYN++I+ C + A ++L
Sbjct: 184 NVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQML 243
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
M C PD TY L+ C+ KR+ L M + + D TY ++++G ++
Sbjct: 244 DLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQA 303
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKML 517
G+ + A F M S+ P TY +L
Sbjct: 304 GRPDAAQEIFSRMDSR---PNIRTYSIL 328
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 147/306 (48%), Gaps = 9/306 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGG 211
+ G+ +YNT++D S K L+ + V+ D + V T ++++ L G
Sbjct: 108 EMGFRPDVVIYNTIID---GSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 164
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFN 270
R+ DA R M + + + ++D VK A K++ E + C+ +N
Sbjct: 165 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 224
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI+G C +VD+A++ + M +G PDVV+Y I +C+ K + +EM ++
Sbjct: 225 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQR 284
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G ITY ++ +A + + A +++ +M D P+ YS L++ L RV+ A
Sbjct: 285 GLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNWRVEKA 341
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+FE+M+K + ++ TYN +I C E+A L + + KPD +Y ++
Sbjct: 342 LVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISG 401
Query: 451 CCRKKR 456
CRK++
Sbjct: 402 FCRKRQ 407
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 150/278 (53%), Gaps = 7/278 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN++V L S ++ L+++M + + ++ T + ++ V+ G++ +A++ + M
Sbjct: 153 YNSLVAGLCCSGRWSDAARLMRDM-VMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 211
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ V+ D + L++ L V+ A ++ + K C+P +N LI+G+CK+++
Sbjct: 212 TRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLP-DVVTYNTLINGFCKSKR 270
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD+ K +EM Q+G D ++Y I+ Y + + M + P++ TY+I
Sbjct: 271 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSI 327
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ L ++ +AL ++E M+ + D + Y+ +I + K G V+DA ++F + +G
Sbjct: 328 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 387
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+ P+V++Y TMIS C + + + + L +KM+ED P
Sbjct: 388 LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 112/250 (44%), Gaps = 1/250 (0%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M Q P +V ++ + + K++ V M+ G + +Y IV++ L + +
Sbjct: 1 MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
AL V KM PD SSLI + RV DA ++ M++ G P+V+ YNT
Sbjct: 61 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I +C +A++L +ME D + D TY L+ C R L+ M D
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAK 530
+ + T+ +++ ++ GK A +EEM + + P TY L L R+ AK
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240
Query: 531 ERINKLLAHA 540
+ ++ ++
Sbjct: 241 QMLDLMVTKG 250
>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
Length = 715
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 103/370 (27%), Positives = 180/370 (48%), Gaps = 16/370 (4%)
Query: 164 YNTMVDVLGKSKKF-------------CLMWELVKEMDELNNGYVS--LATMSTIMRRLV 208
YN+++D L K++ + E V+ + +++ G + + T S ++
Sbjct: 177 YNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYC 236
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGNSVEHAYKVFLEFKDCIPLSSQ 267
+ GR +A F M + G D L+ KG V+ + L +D IPL
Sbjct: 237 KIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDH 296
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+FNILI + K +D A A EM Q+GFSP+VV+YT I+ C+ +M
Sbjct: 297 VFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQM 356
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+G P +IT+T ++H L + + K+ +M + P+ F ++++ L K GRV
Sbjct: 357 VSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRV 416
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+A++ F+ + GV P+V++Y +I C + + ++KLL +M +PD TY+ L
Sbjct: 417 LEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSAL 476
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
L C+ R+ L MF DV +A TY ++ GL +G++ A F+ +++ GI
Sbjct: 477 LNGYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGI 536
Query: 508 VPYHSTYKML 517
+TY ++
Sbjct: 537 QLGINTYNIV 546
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/330 (25%), Positives = 149/330 (45%), Gaps = 1/330 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T +T++ L + GR +DAV F M G+ D + L+ L + K+
Sbjct: 329 NVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLS 388
Query: 256 LEFKDCIPLSSQIF-NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E + + IF N ++ CK +V +A ++ G PDVVSYT I+ YC +
Sbjct: 389 FEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLD 448
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ L M G +P +TY+ +++ K ++++AL +Y +M S D P+ Y
Sbjct: 449 GKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDVKPNAITY 508
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ ++ L AGRV A E + + G+ + TYN ++ C S + AL++ Q +
Sbjct: 509 NIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRS 568
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+ + T+ ++ + R+ L + + + + DA Y +++ IE G LE
Sbjct: 569 KEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEE 628
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ F M G T + KL +K
Sbjct: 629 SDELFLSMEKNGCTANSRTLNAIVRKLLEK 658
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/371 (23%), Positives = 164/371 (44%), Gaps = 47/371 (12%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS--LATMSTIMRRLVRGG 211
Q G+ Y T++D+L K+ + + + V ++ + +S + T ++++ L G
Sbjct: 323 QKGFSPNVVTYTTVIDILCKAGR---VEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIG 379
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFN 270
+ + M G+ + L+ +MD+L K V A+ F + + +
Sbjct: 380 EWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYT 439
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEM 327
ILI G+C K+D++ K + M G PD V+Y+ + YC+ +VDD L +EM
Sbjct: 440 ILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNG---RVDDALALYREM 496
Query: 328 QEKGCKPSVITYTIVMHALGKAKQI----------------------------------- 352
K KP+ ITY I++H L A ++
Sbjct: 497 FSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFV 556
Query: 353 NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
+EAL++++ ++S + + ++ +I L K GR+ DA +F + G+VP+ + Y M
Sbjct: 557 DEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLM 616
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
I S E + +L ME++ C + T +++ K ++ LT + + +
Sbjct: 617 IQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEY 676
Query: 473 SMDAGTYASLV 483
S++A T L+
Sbjct: 677 SVEASTAVLLI 687
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 136/309 (44%), Gaps = 17/309 (5%)
Query: 226 YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDD 284
Y + + +++++ L K V+ AY +F E P + +N +I G CK + +D
Sbjct: 133 YNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDK 192
Query: 285 AQKAMKEMFQQG----------------FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
A+ +++MF +G PDVV+Y+ I++YC+ + + M
Sbjct: 193 AEAVLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMV 252
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+G P TY ++H + + + M D + ++ LI +K +
Sbjct: 253 RRGQNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLD 312
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
A F +M+++G PNV+TY T+I C E+A+ +M + PD T+ L+
Sbjct: 313 KAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLI 372
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C K + L M + +A +++ L + G++ A FF+++I G+
Sbjct: 373 HGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVK 432
Query: 509 PYHSTYKML 517
P +Y +L
Sbjct: 433 PDVVSYTIL 441
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 189/396 (47%), Gaps = 12/396 (3%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
F K+ G+ H + Y++++ L +++ F + L M +L N Y + +
Sbjct: 67 FLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESL---MADLRNSYPPIKCGENLFID 123
Query: 207 LVR----GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
L+R GRY+ ++ F + +GV++ R+L+ L++ L++ + + +F K+
Sbjct: 124 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 183
Query: 263 PLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
++ IF N+L+ CK ++ A K + E+ G P++V+YT + Y D
Sbjct: 184 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPAMGLVPNLVTYTTILGGYVARGDMESA 243
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
L+EM ++G P ITYT++M K + +EA V + M+ ++ P+ Y +I
Sbjct: 244 KRVLEEMLDRGWYPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 303
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K + +A +F++M + +P+ +I + C + + A L +KM ++ C PD
Sbjct: 304 LCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 363
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
+ L+ C++ R+ L K + TY +L+ G+ E G+L A ++
Sbjct: 364 NALLSTLIHWLCKEGRVSEARKLFDEFDKGSIP-SLLTYNTLIAGMCEKGELTEAGRLWD 422
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
+M + P TY +L E L K GN KE + L
Sbjct: 423 DMFERKCKPNAFTYNVLIEGLSKN--GNVKEGVRVL 456
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 4/238 (1%)
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
Y T + +M + GR+ +A M+K +E + V++ L K A
Sbjct: 256 YPDAITYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARN 315
Query: 254 VFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
+F E D +P SS + I C+ KVD+A ++M + PD + I
Sbjct: 316 MFDEMLDRSFMPDSSLCCKV-IDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWL 374
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C+E + E +KG PS++TY ++ + + ++ EA ++++ M C P+
Sbjct: 375 CKEGRVSEARKLFDEF-DKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNA 433
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
Y+ LI LSK G VK+ + E+M + G PN T+ + +EE+A+K++
Sbjct: 434 FTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAIKIV 491
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 111/242 (45%), Gaps = 9/242 (3%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRY 213
G+ Y ++D K +F E MD++ + + T ++R L + +
Sbjct: 254 GWYPDAITYTVLMDGYCKLGRFS---EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 310
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNI 271
+A F M D+ ++D L + + V+ A ++ + +C+P + + +
Sbjct: 311 GEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP-DNALLST 369
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LIH CK +V +A+K E F +G P +++Y I C + + + +M E+
Sbjct: 370 LIHWLCKEGRVSEARKLFDE-FDKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERK 428
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
CKP+ TY +++ L K + E ++V E+M C P+ + + L L K G+ +DA
Sbjct: 429 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFLILFEGLQKLGKEEDAI 488
Query: 392 EI 393
+I
Sbjct: 489 KI 490
>gi|356509602|ref|XP_003523536.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 598
Score = 154 bits (390), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 172/361 (47%), Gaps = 5/361 (1%)
Query: 182 ELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
EL+ ++ + NN V+ + + L+R + DAV FR + + + T +++LM
Sbjct: 127 ELLADV-QCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRG 185
Query: 242 LVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG-FS 298
L + ++ A+++ + + C+P +N LIHG C+ +VD A+ +KE+ G F+
Sbjct: 186 LCRAGEIDEAFRLLNDLRSFGCLP-DVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFA 244
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PDVVSYT I YC+ + + EM G P+ T+ ++ GK + AL +
Sbjct: 245 PDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALAL 304
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
YEKM C+PD + ++SLI + G+V A +++ M + + + T++ ++S C
Sbjct: 305 YEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCN 364
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ A +L+ + E P Y P++ C+ + N ++ M N D T
Sbjct: 365 NNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLT 424
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
+ L+ G G++ A F +M++ G P T L L K + R+ K+LA
Sbjct: 425 FTILIIGHCMKGRMPEAIGIFHKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKKVLA 484
Query: 539 H 539
Sbjct: 485 Q 485
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 132/306 (43%), Gaps = 7/306 (2%)
Query: 236 SVLMDTLVKGNSVEHAYKVFLEFKDC---IPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
S+L+ +L + N + H KV ++ C IP +++ L+ + ++D +++ + ++
Sbjct: 75 SLLLRSLCRSN-LHHTAKVVYDWMRCDGQIP-DNRLLGFLVWSYAIVGRLDVSRELLADV 132
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQI 352
+ V Y R+ +E+ KP T I+M L +A +I
Sbjct: 133 QCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRAGEI 192
Query: 353 NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG-VVPNVLTYNT 411
+EA ++ ++S CLPD Y++LI L + V A + +++ G P+V++Y T
Sbjct: 193 DEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTT 252
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+IS C S+ E L +M P+ T+ L+ + M L M
Sbjct: 253 IISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQG 312
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAK 530
D T+ SL+ G G++ A + +M K I T+ +L L RL A+
Sbjct: 313 CVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKNIGATLYTFSVLVSGLCNNNRLHKAR 372
Query: 531 ERINKL 536
+ + L
Sbjct: 373 DILRLL 378
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/250 (21%), Positives = 117/250 (46%), Gaps = 1/250 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+++L+ C++ A+ M G PD + Y + L ++Q
Sbjct: 74 YSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSRELLADVQ 133
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+ + Y + + L + ++ +A+ ++ ++ P T + L+ L +AG +
Sbjct: 134 CNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRAGEID 193
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM-EEDLCKPDCETYAPL 447
+A + D++ G +P+V+TYNT+I C +E + A LL+++ PD +Y +
Sbjct: 194 EAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNGEFAPDVVSYTTI 253
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C+ +M+ N L M ++ + + T+ +L+ G + G + A + +E+M+ +G
Sbjct: 254 ISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNALIGGFGKLGDMASALALYEKMLVQGC 313
Query: 508 VPYHSTYKML 517
VP +T+ L
Sbjct: 314 VPDVATFTSL 323
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 78/380 (20%), Positives = 131/380 (34%), Gaps = 89/380 (23%)
Query: 145 FGFFTWAKTQTGYMHTPE----------------MYNTMVDVLGKSKKFCLMWELVKEMD 188
GF W+ G + +YN + +VL + K L +E+
Sbjct: 109 LGFLVWSYAIVGRLDVSRELLADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELI 168
Query: 189 ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
L V+ T++ +MR L R G D+A ++ +G D + L+ L + N V
Sbjct: 169 RLRYKPVTY-TVNILMRGLCRAGEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEV 227
Query: 249 EHAYKVFLEF-------KDCIPLSSQI------------------------------FNI 271
+ A + E D + ++ I FN
Sbjct: 228 DRARSLLKEVCLNGEFAPDVVSYTTIISGYCKFSKMEEGNLLFGEMIRSGTAPNTFTFNA 287
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY-------------------- 311
LI G+ K + A ++M QG PDV ++T I Y
Sbjct: 288 LIGGFGKLGDMASALALYEKMLVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHKMNDKN 347
Query: 312 ---------------CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
C K D L+ + E P Y V+ K+ ++EA
Sbjct: 348 IGATLYTFSVLVSGLCNNNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEAN 407
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
K+ +M+ + C PD ++ LI GR+ +A IF M G P+ +T N + S
Sbjct: 408 KIVAEMEVNRCKPDKLTFTILIIGHCMKGRMPEAIGIFHKMLAVGCAPDEITVNNLRSCL 467
Query: 417 CARSEEENALKLLQKMEEDL 436
A ++ + + ++L
Sbjct: 468 LKAGMPGEAARVKKVLAQNL 487
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 6/212 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N ++ GK L ++M L G V +AT ++++ R G+ A++ +
Sbjct: 285 FNALIGGFGKLGDMASALALYEKM--LVQGCVPDVATFTSLINGYFRLGQVHQAMDMWHK 342
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M + SVL+ L N + A + L D +P I+N +I G+CK+
Sbjct: 343 MNDKNIGATLYTFSVLVSGLCNNNRLHKARDILRLLNESDIVP-QPFIYNPVIDGYCKSG 401
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
VD+A K + EM PD +++T I +C + + +M GC P IT
Sbjct: 402 NVDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRMPEAIGIFHKMLAVGCAPDEITVN 461
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ L KA EA +V + + + L TS
Sbjct: 462 NLRSCLLKAGMPGEAARVKKVLAQNLTLGITS 493
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 82/172 (47%)
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
S +TY++++ +L ++ + A VY+ M+ D +PD L++ + GR+ + E+
Sbjct: 70 SYLTYSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVWSYAIVGRLDVSRELL 129
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
D++ V N + YN + + +++ +A+ L +++ KP T L++ CR
Sbjct: 130 ADVQCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILMRGLCRA 189
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
+ LL + D TY +L+ GL +++ A S +E+ G
Sbjct: 190 GEIDEAFRLLNDLRSFGCLPDVITYNTLIHGLCRINEVDRARSLLKEVCLNG 241
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 205/458 (44%), Gaps = 68/458 (14%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
+D+T A +F + HTP Y M++ L ++ + L+++M +L S
Sbjct: 54 HDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQM-KLEGISCSED 112
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
+++ R G + A++ F M+ + V+ + + ++D L+ N + ++
Sbjct: 113 LFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNM 172
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT------------ 305
KD + + +NIL+ CK +VD A K + EM +G PD VSYT
Sbjct: 173 KKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKV 232
Query: 306 ------------------CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
I C+E F + L EM KG P+VI+YT +++AL
Sbjct: 233 KEARELAMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALS 292
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
A + +L V KM + C P+ ++SLI G +A + ++ M ++GVVPNV+
Sbjct: 293 DAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVV 352
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM----KVLNFL 463
YN ++ C++ +A+ + +ME + C P+ TY+ L+ + + +V N++
Sbjct: 353 AYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWM 412
Query: 464 LTH--------------------MFKNDVSM-----------DAGTYASLVRGLIESGKL 492
+TH MF + + T+ + ++GL SG++
Sbjct: 413 ITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRV 472
Query: 493 ELACSFFEEMISKGIVPYHSTY-KMLEEKLEKKRLGNA 529
+ A F++M + G P +TY ++L+ L+ +R G A
Sbjct: 473 DWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEA 510
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 166/328 (50%), Gaps = 3/328 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T +++++ G +A++ + M + GV + A + LM L S+ A VF
Sbjct: 315 NLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVF 374
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+E C P + + ++ LI G+ K +D A + M G P+VV+YTC ++ CR
Sbjct: 375 NQMEINGCCP-NVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCR 433
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
F + ++ MQ + C P+ +T+ + L + +++ A+KV+++M + C P+T+
Sbjct: 434 NSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTT 493
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ L+ L K R +A + +DM+ +G+ N++TYNT+I C AL+LL KM
Sbjct: 494 YNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMV 553
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
KPD T ++ C++ ++ + L+ + D Y SL+ G+ +E
Sbjct: 554 VRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVE 613
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKL 521
A + M+S+GI P +T+ +L L
Sbjct: 614 EAIVYLRRMLSEGISPNVATWNVLVRHL 641
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 128/305 (41%), Gaps = 34/305 (11%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
PL+ Q+ +I R++D Q +++M +G S + I Y R +
Sbjct: 76 PLTYQM---MIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALK 132
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
T MQ+ KP+V Y ++ AL + +Y MK D P+ Y+ L+ L
Sbjct: 133 TFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALC 192
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC--ARSEE------------------ 422
K RV A+++ +M +G P+ ++Y T+ISS C + +E
Sbjct: 193 KNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNAL 252
Query: 423 ----------ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
E A +LL +M P+ +Y ++ +++ +L MF
Sbjct: 253 INGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR-LGNAKE 531
S + T+ SL++G G A F++ MI +G+VP Y L L KR LG+A
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372
Query: 532 RINKL 536
N++
Sbjct: 373 VFNQM 377
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 126/295 (42%), Gaps = 36/295 (12%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
+ DL A + W T G Y MVDVL ++ F + L++ M ++ N +
Sbjct: 399 AGDLDGASEVWNWMITH-GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM-QVENCPPNT 456
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T +T ++ L GR D A++ F M G +T + L+D+L+
Sbjct: 457 VTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLL-------------- 502
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K R+ +A +K+M +G ++V+Y I YC
Sbjct: 503 --------------------KDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGML 542
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + L +M +G KP IT IV+ A K ++N A+++ +++ + PD Y+SL
Sbjct: 543 GEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSL 602
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
I + V++A M +G+ PNV T+N ++ + A++ L +
Sbjct: 603 ISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAV 657
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 3/200 (1%)
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF-YSSLIFILSKAGRVKDAN 391
K SV+ V+ L I AL+ ++ + + T Y +I L+ +
Sbjct: 37 KSSVLKEADVLKRLKHEHDITLALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQ 96
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ + MK +G+ + + ++I S E ALK +M++ KP + Y +L
Sbjct: 97 YLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDAL 156
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
+ R +++N + ++M K+ + + TY L++ L ++ +++ A EM SKG P
Sbjct: 157 LDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDE 216
Query: 512 STYKMLEEKLEKKRLGNAKE 531
+Y L L K LG KE
Sbjct: 217 VSYTTLISSLCK--LGKVKE 234
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/329 (27%), Positives = 163/329 (49%), Gaps = 1/329 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ S +M + G DA++ FR KK+ +++ L+K + + +
Sbjct: 66 IYVFSGLMTAYLESGFVHDAIQCFRLTKKHKFWVPFDTCRKVLEHLMKLKYFKLVWDFYK 125
Query: 257 EFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E +C P S FNI++H +CK ++ AQ + + G P VVS+ + Y R
Sbjct: 126 EILECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLG 185
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
D + M G +P V TY+++++ L K +++EA +++ +M +P+ ++
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFT 245
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI + K G V A EI++ M QG P+++TYNT+I C + + + L+ +M +
Sbjct: 246 TLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMN 305
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
KPD TY L+ CC++ ++ M K + +D Y +LV GL + G+ + A
Sbjct: 306 GLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDA 365
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
F EM+S G+ P + TY M+ + KK
Sbjct: 366 EKMFREMLSVGLKPDNGTYTMIINEFCKK 394
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 147/340 (43%), Gaps = 37/340 (10%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W+ KE+ L GY SL + +M R + G A F + K+G+
Sbjct: 111 LMKLKYFKLVWDFYKEI--LECGYPASLYFFNIVMHRFCKEGEMRRAQSVFDAITKWGLR 168
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ FN L++G+ + +D+ +
Sbjct: 169 PSVVS----------------------------------FNTLMNGYIRLGDLDEGFRLK 194
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
M G PDV +Y+ I C+E + ++ EM ++G P+ +T+T ++ K
Sbjct: 195 SAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKN 254
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
++ A+++Y++M S PD Y++LI+ L K G +K + ++M G+ P+ +TY
Sbjct: 255 GMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKITY 314
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
T+I C + E A + ++M ++ + D Y L+ C++ R + M
Sbjct: 315 TTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREMLS 374
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ D GTY ++ + G + A +EM G VP
Sbjct: 375 VGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVP 414
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 111/249 (44%), Gaps = 36/249 (14%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K + V+ A ++F
Sbjct: 170 SVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKVDEANELF 229
Query: 256 LEFKD--CIP---------------------------LSSQIF-------NILIHGWCKT 279
E D +P + SQ F N LI+G CK
Sbjct: 230 NEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKK 289
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+ + + EM G PD ++YT I+ C+E D + K M ++ + + Y
Sbjct: 290 GDLKQVRALIDEMSMNGLKPDKITYTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAY 349
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ L + + ++A K++ +M S PD Y+ +I K G V+ A+ + ++M++
Sbjct: 350 TALVSGLCQEGRADDAEKMFREMLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQR 409
Query: 400 QGVVPNVLT 408
G VP V+T
Sbjct: 410 DGHVPCVVT 418
>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
Length = 644
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 190/384 (49%), Gaps = 5/384 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++ L ++ F + E++ +M E + + +TI+ + + G + A E M
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSE-HGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
YG++ + + ++ L + A ++ E KDC PL FNIL+ +C+
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC-PLDDVTFNILVDFFCQNGL 371
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD + +++M G PDV++YT I +C+E + LK M GCKP+ ++YTI
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ L A + +A ++ +M C P+ +++LI L K G V+ A E+ + M G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P++++Y+T+I + E AL+LL M P+ Y+ + R+ R+ +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ ++ + DA Y +++ L + + + A FF M+S G +P STY ML + L
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611
Query: 522 EKKRLG-NAKERINKLLAHAKEQK 544
+ L A+E +++L + +K
Sbjct: 612 ASEGLAKEAQELLSELCSRGALRK 635
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 169/410 (41%), Gaps = 83/410 (20%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFK 259
I+ R G + ++V M G DT +++++ + + V+ A + L F
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF 210
Query: 260 DCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C + I +N ++ G C ++ D ++ M EM + +P++V++ I + CR F
Sbjct: 211 GC---EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 318 RKVDDTLKEMQEKGC-----------------------------------KPSVITYTIV 342
+V + L +M E GC KP+V+ Y V
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L A++ EA ++ +M DC D ++ L+ + G V E+ E M G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM----- 457
+P+V+TY T+I+ C + A+ LL+ M CKP+ +Y +LK C R
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 458 ------------------KVLNF------------LLTHMFKNDVSMDAGTYASLVRGLI 487
++NF LL M N S D +Y++++ GL
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
++GK E A M++KGI P Y + L + + R+NK++
Sbjct: 508 KAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR------EGRVNKVI 551
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 160/345 (46%), Gaps = 4/345 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T ++R L GR DA+E M G V+++ + ++ +V +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K C L + N++++ C+ VD+A ++++ G D+VSY ++ C K
Sbjct: 173 HAKGCT-LDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ V++ + EM C P+++T+ ++ L + +V +M C PD Y++
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I + K G ++ ANEI M G+ PNV+ YNT++ C+ + A +LL +M +
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C D T+ L+ C+ + + LL M + D TY +++ G + G ++ A
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHA 540
+ M S G P +Y ++ + L R +A+E +++++
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 112/270 (41%), Gaps = 33/270 (12%)
Query: 301 VVSYTCFIEHYCREKDF------------------------------RKVD--DTLKEMQ 328
VV+Y + YCR R D + L EM
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
KGC P Y +++ A ++ +++V E M + C DT + ++ + + G V
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A + + G ++++YN ++ C + +L+ +M C P+ T+ L+
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
CR + ++ +L M ++ + D YA+++ G+ + G LE+A M S G+
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318
Query: 509 PYHSTYKMLEEKL-EKKRLGNAKERINKLL 537
P Y + + L +R A+E ++++
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMF 348
>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
Length = 644
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 190/384 (49%), Gaps = 5/384 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++ L ++ F + E++ +M E + + +TI+ + + G + A E M
Sbjct: 254 FNTLIGYLCRNGLFERVHEVLAQMSE-HGCTPDIRMYATIIDGICKEGHLEVANEILNRM 312
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
YG++ + + ++ L + A ++ E KDC PL FNIL+ +C+
Sbjct: 313 PSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDC-PLDDVTFNILVDFFCQNGL 371
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD + +++M G PDV++YT I +C+E + LK M GCKP+ ++YTI
Sbjct: 372 VDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTI 431
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ L A + +A ++ +M C P+ +++LI L K G V+ A E+ + M G
Sbjct: 432 VLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNG 491
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P++++Y+T+I + E AL+LL M P+ Y+ + R+ R+ +
Sbjct: 492 CSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVI 551
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ ++ + DA Y +++ L + + + A FF M+S G +P STY ML + L
Sbjct: 552 QMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGL 611
Query: 522 EKKRLG-NAKERINKLLAHAKEQK 544
+ L A+E +++L + +K
Sbjct: 612 ASEGLAKEAQELLSELCSRGALRK 635
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 97/410 (23%), Positives = 169/410 (41%), Gaps = 83/410 (20%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFK 259
I+ R G + ++V M G DT +++++ + + V+ A + L F
Sbjct: 151 VILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFF 210
Query: 260 DCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C + I +N ++ G C ++ D ++ M EM + +P++V++ I + CR F
Sbjct: 211 GC---EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLF 267
Query: 318 RKVDDTLKEMQEKGC-----------------------------------KPSVITYTIV 342
+V + L +M E GC KP+V+ Y V
Sbjct: 268 ERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTV 327
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L A++ EA ++ +M DC D ++ L+ + G V E+ E M G
Sbjct: 328 LKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGC 387
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM----- 457
+P+V+TY T+I+ C + A+ LL+ M CKP+ +Y +LK C R
Sbjct: 388 MPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEE 447
Query: 458 ------------------KVLNF------------LLTHMFKNDVSMDAGTYASLVRGLI 487
++NF LL M N S D +Y++++ GL
Sbjct: 448 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 507
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
++GK E A M++KGI P Y + L + + R+NK++
Sbjct: 508 KAGKTEEALELLNVMVNKGISPNTIIYSSIACALSR------EGRVNKVI 551
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 160/345 (46%), Gaps = 4/345 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T ++R L GR DA+E M G V+++ + ++ +V +
Sbjct: 113 TFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAM 172
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K C L + N++++ C+ VD+A ++++ G D+VSY ++ C K
Sbjct: 173 HAKGCT-LDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKR 231
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ V++ + EM C P+++T+ ++ L + +V +M C PD Y++
Sbjct: 232 WGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYAT 291
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I + K G ++ ANEI M G+ PNV+ YNT++ C+ + A +LL +M +
Sbjct: 292 IIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C D T+ L+ C+ + + LL M + D TY +++ G + G ++ A
Sbjct: 352 CPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAV 411
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHA 540
+ M S G P +Y ++ + L R +A+E +++++
Sbjct: 412 MLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQG 456
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 112/270 (41%), Gaps = 33/270 (12%)
Query: 301 VVSYTCFIEHYCREKDF------------------------------RKVD--DTLKEMQ 328
VV+Y + YCR R D + L EM
Sbjct: 79 VVAYNAMVAGYCRAGQLAAARRLAAAVPVPPNAYTFFPVVRGLCTRGRIADALEVLDEMS 138
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
KGC P Y +++ A ++ +++V E M + C DT + ++ + + G V
Sbjct: 139 FKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVD 198
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A + + G ++++YN ++ C + +L+ +M C P+ T+ L+
Sbjct: 199 EAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLI 258
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
CR + ++ +L M ++ + D YA+++ G+ + G LE+A M S G+
Sbjct: 259 GYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLK 318
Query: 509 PYHSTYKMLEEKL-EKKRLGNAKERINKLL 537
P Y + + L +R A+E ++++
Sbjct: 319 PNVVCYNTVLKGLCSAERWKEAEELLSEMF 348
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 157/340 (46%), Gaps = 38/340 (11%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTR 280
M +G+ D L++L+++ + +A+ V + C P + FN LI G C
Sbjct: 138 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQP-DNTTFNTLIRGLCVEG 196
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+ +A + +GF PDVV+Y + C+ + L+ M +K C+P+VI Y
Sbjct: 197 KIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYN 256
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS------------------ 382
++ +L K +Q+ EA ++ +M + PD Y+SLI L
Sbjct: 257 TIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 316
Query: 383 -----------------KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
K G + A+++ + M K+GV P+V+TY ++ C RSE + A
Sbjct: 317 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEA 376
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
+K+ M C P+ +Y L+ C+ +RM LL M + D TY +L+ G
Sbjct: 377 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 436
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
L G+L+ A + F EM++ G +P TY++L + L K
Sbjct: 437 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNH 476
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 143/312 (45%), Gaps = 3/312 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T T+M L + G A+ R M + + A + ++D+L K V A+ +F
Sbjct: 217 VVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFS 276
Query: 257 EFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E +S IF N LIH C + + EM P+VV ++ ++ C+E
Sbjct: 277 EMIT-KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 335
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
D + M ++G +P V+TYT +M +++EA+KV++ M C+P+ Y
Sbjct: 336 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 395
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ LI + R+ A + E M QG++ + +TYNT+I C ++A+ L +M
Sbjct: 396 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 455
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD TY LL C+ + LL + +++ D Y + G+ +G+LE
Sbjct: 456 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 515
Query: 495 ACSFFEEMISKG 506
A F + +G
Sbjct: 516 ARDLFSNLSCQG 527
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 113/245 (46%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA + M P V +T + + K + V +M G P V T I
Sbjct: 93 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 152
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++ +++ A V K+ C PD + +++LI L G++ +A +F+ +G
Sbjct: 153 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 212
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+V+TY T+++ C A++LL+ M + C+P+ Y ++ C+ +++
Sbjct: 213 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 272
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + M +S D TY SL+ L + + + EM++ I+P + + + L
Sbjct: 273 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 332
Query: 522 EKKRL 526
K+ +
Sbjct: 333 CKEGM 337
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 61/137 (44%), Gaps = 4/137 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ + ++ L+++M L T +T++ L GR A+ F M
Sbjct: 395 YNILINGYCQIQRMDKAMGLLEQM-SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM 453
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRK 281
G D +L+D L K + + A V L+ + L + I +NI I G C+ +
Sbjct: 454 VASGQIPDLVTYRILLDYLCKNHHLAEAM-VLLKAIEGSNLDADILVYNIAIDGMCRAGE 512
Query: 282 VDDAQKAMKEMFQQGFS 298
++ A+ + QGF+
Sbjct: 513 LEAARDLFSNLSCQGFA 529
>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Vitis vinifera]
Length = 898
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 179/361 (49%), Gaps = 6/361 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST-IMRRLVRGGRYDDAVEAFRG 222
+++++D LGK + + L ++M L+ G+V A + T ++R + GR +D + ++
Sbjct: 477 FSSLIDGLGKCGRVDDAYSLYEKM--LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKE 534
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTR 280
M G D ++ MD + K E +F E IP ++ ++ILIHG K
Sbjct: 535 MVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIP-DARSYSILIHGLVKAG 593
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ + M +QG D +Y I+ +C+ K L+EM+ KG P+V+TY
Sbjct: 594 LANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYG 653
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
V+ L K +++EA ++E+ KS+ + YSSLI K GR+ +A I E++ ++
Sbjct: 654 SVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQK 713
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ PNV T+N ++ + E AL Q M++ C P+ TY+ L+ CR ++
Sbjct: 714 GLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKA 773
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
M K + + TY +++ GL ++G + A F + G +P ++Y + E
Sbjct: 774 FVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEG 833
Query: 521 L 521
L
Sbjct: 834 L 834
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 120/490 (24%), Positives = 208/490 (42%), Gaps = 73/490 (14%)
Query: 90 SENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT 149
+E VD + IL P + +L G LV L+R D A +F
Sbjct: 56 NEGIRKGVDDVCCILESGPWGP-TLENSLSALGEKPLPELVIGVLKRL-KDANTAVNYFQ 113
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM----- 204
WA+ QT +H PE YN+++ V+ ++ +F + +++EM G S ++ +
Sbjct: 114 WAEKQTEKVHCPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKS 173
Query: 205 RRL---------VRGGRYDDAVEA--------------------FRGMKKYGVEKDTRAL 235
R+L +R ++ A A F M++ G E +
Sbjct: 174 RKLREAFDIIQTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLF 233
Query: 236 SVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQ 294
+ L+ + V+ A + E K + + ++N+ I + K KVD + K EM
Sbjct: 234 TTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKS 293
Query: 295 QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE------------------------- 329
G PD V+YT I C+ + + +++++
Sbjct: 294 HGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDE 353
Query: 330 ----------KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
KG PSVI Y ++ LGK +++ EAL+++E+MK D +P+ Y+ LI
Sbjct: 354 AYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKR-DAVPNVPTYNILID 412
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+L + G++ A EI +DM++ G+ PNVLT N MI C + E A + + M++ +C P
Sbjct: 413 MLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTP 472
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
+ T++ L+ + R+ L M A Y SL+R + G+ E +
Sbjct: 473 NAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIY 532
Query: 500 EEMISKGIVP 509
+EM+ G P
Sbjct: 533 KEMVHTGCSP 542
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 97/378 (25%), Positives = 174/378 (46%), Gaps = 4/378 (1%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF K+ G M Y +M+ VL K+ + EL +++++ N +T++
Sbjct: 287 FFHEMKSH-GLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQ-NRKVPCAYAYNTMIMG 344
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLS 265
G++D+A K G A + ++ L K VE A ++F E K D +P +
Sbjct: 345 YGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAVP-N 403
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+NILI C+ K++ A + +M + G P+V++ I+ C+ + + +
Sbjct: 404 VPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFE 463
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
M +K C P+ +T++ ++ LGK ++++A +YEKM +P Y+SLI K G
Sbjct: 464 GMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCG 523
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
R +D ++I+++M G P++ NT + E E L +++ PD +Y+
Sbjct: 524 RKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYS 583
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ + L M + +D Y +++ G +SGK+ A EEM K
Sbjct: 584 ILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVK 643
Query: 506 GIVPYHSTYKMLEEKLEK 523
G P TY + + L K
Sbjct: 644 GHPPTVVTYGSVIDGLAK 661
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 173/364 (47%), Gaps = 4/364 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++D+L + K E+ +M E + ++ T++ ++ RL + + ++A F GM
Sbjct: 407 YNILIDMLCREGKLNAALEIRDDM-ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM 465
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRK 281
+ S L+D L K V+ AY ++ + DC +P + ++ LI + K +
Sbjct: 466 DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVP-GAIVYTSLIRSFFKCGR 524
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D K KEM G SPD+ +++ + + K +E+ G P +Y+I
Sbjct: 525 KEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSI 584
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H L KA NE +++ MK C+ DT Y+++I K+G+V A ++ E+MK +G
Sbjct: 585 LIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKG 644
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P V+TY ++I + A L ++ + + K + Y+ L+ + R+
Sbjct: 645 HPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAY 704
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
++ + + ++ + T+ L+ L+++ ++ A F+ M P TY +L L
Sbjct: 705 LIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGL 764
Query: 522 EKKR 525
+ R
Sbjct: 765 CRVR 768
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 187/434 (43%), Gaps = 58/434 (13%)
Query: 132 QTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN 191
QT+R+F PAF Y ++ L + ++ M L +M EL
Sbjct: 184 QTMRKFK--FRPAF----------------SAYTILIGALSEVREPDPMLILFHQMQEL- 224
Query: 192 NGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
GY V++ +T++R R GR D A+ MK ++ D +V +D K V+
Sbjct: 225 -GYEVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDM 283
Query: 251 AYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
++K F E K + + + +I CK ++D+A + +++ Q P +Y I
Sbjct: 284 SWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIM 343
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
Y F + L+ + KG PSVI Y ++ LGK +++ EAL+++E+MK D +P
Sbjct: 344 GYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRD-AVP 402
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT--------------------- 408
+ Y+ LI +L + G++ A EI +DM++ G+ PNVLT
Sbjct: 403 NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIF 462
Query: 409 --------------YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++++I ++A L +KM + P Y L++ +
Sbjct: 463 EGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKC 522
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
R + + + M S D + + + ++G+ E + F E+ + G +P +Y
Sbjct: 523 GRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSY 582
Query: 515 KMLEEKLEKKRLGN 528
+L L K L N
Sbjct: 583 SILIHGLVKAGLAN 596
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 128/254 (50%), Gaps = 4/254 (1%)
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
+A + G + YN ++D KS K ++L++EM ++ ++ T +++ L +
Sbjct: 603 YAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEM-KVKGHPPTVVTYGSVIDGLAK 661
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQ 267
R D+A F K G++ + S L+D K ++ AY + E K P +
Sbjct: 662 IDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP-NVY 720
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+N L+ K ++++A + M P+ ++Y+ I CR + F K +EM
Sbjct: 721 TWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEM 780
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
Q+ G KP+ ITYT ++ L KA I EA ++ + K++ +PD++ Y+++I LS A +
Sbjct: 781 QKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKA 840
Query: 388 KDANEIFEDMKKQG 401
DA +FE+ + +G
Sbjct: 841 MDAYALFEETRLKG 854
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 119/259 (45%)
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+ +N L+ + + D ++ ++EM GF P + + + + R+ D ++
Sbjct: 126 EAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQT 185
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M++ +P+ YTI++ AL + ++ + L ++ +M+ + +++LI + ++ GR
Sbjct: 186 MRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGR 245
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
V A + ++MK + +++ YN I + + + K +M+ PD TY
Sbjct: 246 VDAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTS 305
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++ + C+ R+ L + +N A Y +++ G +GK + A E +KG
Sbjct: 306 MIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKG 365
Query: 507 IVPYHSTYKMLEEKLEKKR 525
+P Y + L KKR
Sbjct: 366 SIPSVIAYNCILTCLGKKR 384
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 192/435 (44%), Gaps = 73/435 (16%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFC----LMWELVKEMDELNNGYVSLATMST 202
FF W++ + + E ++ +L SKK+ + +LVK T+S+
Sbjct: 64 FFQWSQKEFRISYGLETTGKVLHLLANSKKYSKVRSFLDKLVKNEKH---------TVSS 114
Query: 203 IMRRLVRGG---------------------RYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
+ L+ GG A E FR ++ YG + + + L+
Sbjct: 115 VFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLLSA 174
Query: 242 LVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
LVKGN V+ E K I + FNI I+G CK K++ A+ ++++ GFSP+
Sbjct: 175 LVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPN 234
Query: 301 VVSYTCFIEH--------------------------------------YCREKDFRKVDD 322
+V+Y I+ +C++++ +
Sbjct: 235 IVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKN 294
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+EMQ +G KP+++TY +++ L +++EA+ +++KM P+ +++LI
Sbjct: 295 AFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFC 354
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K +K+A ++F+D+ +Q +VPN +T+NTMI + C E L M ++ P+
Sbjct: 355 KKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVS 414
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ CR + ++ LL M ++ D TY L+ G + G+ A EM
Sbjct: 415 TYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEM 474
Query: 503 ISKGIVPYHSTYKML 517
++ G+ P H TY L
Sbjct: 475 LNVGVKPNHVTYNTL 489
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 165/370 (44%), Gaps = 44/370 (11%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T + + L + G+ + A + +K +G + + L+D K S Y+
Sbjct: 199 NLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRAD 258
Query: 256 LEFKDCIPLSSQI------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
K+ L+++I FN LI G+CK V A+ A +EM +QG P++V+Y I
Sbjct: 259 AILKEM--LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLIN 316
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
+ +M G KP+++T+ +++ K K I EA K+++ + D +P
Sbjct: 317 GLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVP 376
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ ++++I KAG +++ + M +G+ PNV TYN +I+ C A KLL
Sbjct: 377 NAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLL 436
Query: 430 QKMEEDLCKPDCETYAPLLKMCCR----KKRMKVLNFLL--------------------- 464
+ME K D TY L+ C+ K K+L +L
Sbjct: 437 NEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCME 496
Query: 465 ----------THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
T M K + TY L++G ++GKLE A EM+ KG+ P +TY
Sbjct: 497 GNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556
Query: 515 KMLE-EKLEK 523
++ E LEK
Sbjct: 557 DVVRLEMLEK 566
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 162/340 (47%), Gaps = 7/340 (2%)
Query: 156 GYMHTPEMYNTMVDVL---GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
G+ YNT++D G + K ++KEM N + T +T++ +
Sbjct: 230 GFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLA-NKICPNEITFNTLIDGFCKDEN 288
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FN 270
A AF M++ G++ + + L++ L ++ A ++ + + L I FN
Sbjct: 289 VLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVG-LGLKPNIVTFN 347
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI+G+CK + + +A+K ++ +Q P+ +++ I+ +C+ + M ++
Sbjct: 348 ALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDE 407
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P+V TY ++ L + + + A K+ +M++ + D Y+ LI K G A
Sbjct: 408 GIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKA 467
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
++ +M GV PN +TYNT++ C + ALK+ +ME++ + + TY L+K
Sbjct: 468 EKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKG 527
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
C+ +++ N LL M + ++ + TY + ++E G
Sbjct: 528 FCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKG 567
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 111/229 (48%), Gaps = 10/229 (4%)
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
V++Y +E + + FR+V D ++ C P ++ AL K + E VY+
Sbjct: 137 VLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNP-------LLSALVKGNETGEMQYVYK 189
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+M P+ + ++ I L KAG++ A ++ ED+K G PN++TYNT+I C +
Sbjct: 190 EMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKG 249
Query: 421 EEE---NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
A +L++M + P+ T+ L+ C+ + + M + + +
Sbjct: 250 SAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIV 309
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
TY SL+ GL +GKL+ A + +++M+ G+ P T+ L KK++
Sbjct: 310 TYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKM 358
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 92/193 (47%), Gaps = 3/193 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ + G ++ M G+ + + L+ L + +V A K+ E
Sbjct: 380 TFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEM 439
Query: 259 KDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
++ L + + +NILI GWCK + A+K + EM G P+ V+Y ++ YC E +
Sbjct: 440 EN-YELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGN 498
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ +M+++G + +V+TY +++ K ++ +A ++ +M P+ + Y
Sbjct: 499 LKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDV 558
Query: 377 LIFILSKAGRVKD 389
+ + + G + D
Sbjct: 559 VRLEMLEKGFIPD 571
>gi|242041823|ref|XP_002468306.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
gi|241922160|gb|EER95304.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
Length = 519
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 213/454 (46%), Gaps = 8/454 (1%)
Query: 90 SENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFS---NDLTPAFG 146
+ + + D ++ +I++ +P + AL V +S+ L++ +RRF D A
Sbjct: 37 ASDADADAGEVYRIVTSA-ATPSAMESALAASAVPLSSPLLDAVMRRFRFAHGDPLRALS 95
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
+ A + G +P +T + VLG++++F MW+L+ + V+ T ++ R
Sbjct: 96 LLSLAADRGGVAPSPYAIDTALYVLGRARRFPHMWDLLATTRRICPDAVTSRTAMIVLGR 155
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRAL-SVLMDTLVKGNSVEHAYKVFLEFKDCIPLS 265
+ + + V +FR + + D L + L+ TL + S+ A VF K ++
Sbjct: 156 VAKVCSVHETVASFRRLARMFHAVDPACLFNALLRTLCQEKSMSDARNVFHALKYDFRVN 215
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
FNIL+ GW + +DA+ + EM + G PD+V+Y I+ +C+ +D K L
Sbjct: 216 RHTFNILLSGW---KSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRDVEKAYKLLD 272
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM+EK P +ITYT ++ LG Q ++A + ++M C PD Y++ I A
Sbjct: 273 EMREKDISPDIITYTSLIGGLGLIGQPDKARDLLKEMHELGCSPDVPAYNAAIRNFVIAK 332
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
R+ DA + + M +G++PN TYN + + +L ++M + C P+ ++
Sbjct: 333 RLGDAFALMDQMASKGLMPNPTTYNLFFRCYYWAFDIGSTWRLYERMRSEGCFPNTQSCM 392
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
++++C R ++ L + M N L L + GKLE F +M+
Sbjct: 393 FIIRLCHRYGKVGQALELWSDMVSNRFGSFTLVSDVLFDLLCDEGKLEEVERCFCQMVEF 452
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
G P + ++ ++ ++ + + R+ + +A
Sbjct: 453 GQKPSNVAFRRIKILMQVAKQEESIARLTEKMAQ 486
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 109/275 (39%), Gaps = 39/275 (14%)
Query: 207 LVRGGRYDDAVEAFRG-MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------ 259
L+ G + + EAF M++ GVE D + L+D K VE AYK+ E +
Sbjct: 222 LLSGWKSAEDAEAFVAEMRELGVEPDLVTYNSLIDCHCKNRDVEKAYKLLDEMREKDISP 281
Query: 260 DCIPLSSQI------------------------------FNILIHGWCKTRKVDDAQKAM 289
D I +S I +N I + +++ DA M
Sbjct: 282 DIITYTSLIGGLGLIGQPDKARDLLKEMHELGCSPDVPAYNAAIRNFVIAKRLGDAFALM 341
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
+M +G P+ +Y F Y D + M+ +GC P+ + ++ +
Sbjct: 342 DQMASKGLMPNPTTYNLFFRCYYWAFDIGSTWRLYERMRSEGCFPNTQSCMFIIRLCHRY 401
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
++ +AL+++ M S+ T L +L G++++ F M + G P+ + +
Sbjct: 402 GKVGQALELWSDMVSNRFGSFTLVSDVLFDLLCDEGKLEEVERCFCQMVEFGQKPSNVAF 461
Query: 410 NTMISSACARSEEENALKLLQKMEE--DLCKPDCE 442
+ +EE+ +L +KM + L DC+
Sbjct: 462 RRIKILMQVAKQEESIARLTEKMAQFGRLAPEDCQ 496
>gi|116787233|gb|ABK24422.1| unknown [Picea sitchensis]
Length = 504
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/419 (26%), Positives = 185/419 (44%), Gaps = 47/419 (11%)
Query: 100 ISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMH 159
+S IL K Q + L G G+ VS VE L+ A FF WA + H
Sbjct: 53 VSNILKKPPQM--GIENTLNGLGLGVSIKFVEDVLKLSYGAGMEAMKFFRWAGLKLSSKH 110
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
+P +N +VD+LG K F MW+ +K M N G VS T+S++ V+ G+ D+A
Sbjct: 111 SPLAWNLLVDLLGSDKLFDAMWDCIKIMK--NQGIVSTETLSSVFGNYVQAGKVDEARMT 168
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKT 279
F M++YG +D AL+ + L + V+ A + F K+ I + + +L+ GW
Sbjct: 169 FEVMEQYGCRQDVVALNCYISALCRYKQVKAALEFFDSVKERIAPDADTYALLLEGWEIE 228
Query: 280 RKVDDAQKAMKEMFQQ-GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
V +A+ EM + G+ P+ S
Sbjct: 229 GNVSNARSTFGEMIARLGWMPNNTS----------------------------------A 254
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN------E 392
Y + L Q++EALK MK+ CLPD F+ + + IL + +K+
Sbjct: 255 YNAFLSTLVNGFQVDEALKYLGVMKTKKCLPDLGFFRNTLQILYQRKAMKEPYGLWQLMS 314
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARS--EEENALKLLQKMEEDLCKPDCETYAPLLKM 450
++E M++ G+VP++ TYNTMI C+ + + +A LL +M PD +TY + +
Sbjct: 315 LWEFMRQSGIVPDLPTYNTMIGVCCSANPIQVNSAYSLLDEMALTGAFPDSKTYNTIFEA 374
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
++++ + + M KN+ Y ++ E+ E+A + MI K I P
Sbjct: 375 FITARKVEEASSIFREMTKNEFCPLYANYVMAIKMYFEADDSEMAVMMWRHMIQKAIFP 433
>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
Length = 726
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 167/352 (47%), Gaps = 4/352 (1%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
+ +TI+ L GR D+ + F+ M++ R +V++ L + +F E
Sbjct: 285 VSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNE 344
Query: 258 FKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
++ C P + + +++ CK RK+D++++ + EM ++G P VV+Y I YC E
Sbjct: 345 MRERSCEP-NVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEG 403
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ L M+ C+P+ TY ++ K K +++A+ + KM P Y+
Sbjct: 404 RIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYN 463
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
SLI + KAG A ++ + +K+ G+VP+ TY+ I + C E A L ++E
Sbjct: 464 SLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEK 523
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
K + Y L+ C+ ++ LL M D ++ TY SL+ G+ + GK++
Sbjct: 524 GIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEG 583
Query: 496 CSFFEEMISKGIVPYHSTYKML-EEKLEKKRLGNAKERINKLLAHAKEQKTF 546
S E M G+ P +TY +L EE L + +A N++++ + +
Sbjct: 584 LSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVY 635
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/358 (29%), Positives = 169/358 (47%), Gaps = 8/358 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y MVD + K +K ++ EM E G V S+ T + ++R GR + A+E
Sbjct: 357 YTVMVDAMCKERKLDESRRILNEMME--KGLVPSVVTYNALIRGYCEEGRIEAALEILGL 414
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKT 279
M+ + R + L+ K V A + LE K + S +N LIH CK
Sbjct: 415 MESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESK--LTPSLVTYNSLIHVQCKA 472
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
D A K + + + G PD +Y+ FI+ C+ K + D ++EKG K + + Y
Sbjct: 473 GHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMY 532
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ KA +I+EA+ + E+M S+DCLP++S Y+SLI+ + K G+V++ + E+M K
Sbjct: 533 TALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSK 592
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
GV P V TY +I + ++A ++ +M KPD TY + C +K
Sbjct: 593 MGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNVKE 652
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ M + V D+ TY L+ G A + + M+ G P H + L
Sbjct: 653 AEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNL 710
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/442 (24%), Positives = 202/442 (45%), Gaps = 54/442 (12%)
Query: 137 FSN--DLTP--AFGFF-TWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN 191
F+N DL P A FF + + G+ HT + ++ ++ +L + F + ++ M +
Sbjct: 91 FNNHPDLNPNIALQFFNSLPLIKPGFKHTVKSHSFLLKILIPNNLFGVGEKIRISMIK-- 148
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
VS+ + ++ L + R D+ ++ + R+ + L+ L + ++
Sbjct: 149 -ACVSVDDIRFLLDFLRQMNRDDNDIK---------FKLSVRSYNELLMMLARFLMIDEM 198
Query: 252 YKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+V+ E D I + N +++ + K + +A + ++FQ G SPD +YT I
Sbjct: 199 KRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILG 258
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
YCR D M KGC+ + ++YT ++H L +A +I+E + +++KM+ DDC P
Sbjct: 259 YCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPT 318
Query: 371 TSFYSSLIFIL-----------------------------------SKAGRVKDANEIFE 395
Y+ +I L K ++ ++ I
Sbjct: 319 VRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILN 378
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M ++G+VP+V+TYN +I C E AL++L ME + C+P+ TY L+ ++K
Sbjct: 379 EMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRK 438
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ LL+ M ++ ++ TY SL+ ++G + A + + G+VP TY
Sbjct: 439 HVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYS 498
Query: 516 MLEEKLEK-KRLGNAKERINKL 536
+ + L K KR+ A + N L
Sbjct: 499 VFIDTLCKSKRMEEACDLFNSL 520
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 124/259 (47%), Gaps = 8/259 (3%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
TP + YN+++ V K+ F ++L+ + E NG V T S + L + R ++A
Sbjct: 456 TPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKE--NGLVPDQWTYSVFIDTLCKSKRMEEA 513
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIH 274
+ F +K+ G++ + + L+D K ++ A + + +DC+P +S +N LI+
Sbjct: 514 CDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLP-NSSTYNSLIY 572
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G CK KV + ++ M + G P V +YT IE RE DF + +M G KP
Sbjct: 573 GVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKP 632
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
V TYT +H + + EA + +M +PD+ Y+ LI + G DA +
Sbjct: 633 DVYTYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVL 692
Query: 395 EDMKKQGVVPNVLTYNTMI 413
+ M G P+ +N +I
Sbjct: 693 KRMLDAGCDPSHPIWNNLI 711
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 147/268 (54%), Gaps = 2/268 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N LI G C + +A +++MF++G PDVV+YT +E C+ +++ L EM
Sbjct: 169 YNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMH 228
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+KGC P ++TY +V++ + + ++ +A++ + + S C P+T Y+ ++ L A R +
Sbjct: 229 DKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWE 288
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
DA ++ E+M +G PNV+T+N +IS C R E A+++L++M + C P+ +Y PLL
Sbjct: 289 DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLL 348
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C++K++ + M D +Y +L+ L +G++++A ++ KG
Sbjct: 349 HAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCS 408
Query: 509 PYHSTYKMLEEKLEKKRLGNAKERINKL 536
P +Y + + L K G KE + L
Sbjct: 409 PVLISYNTVIDGLTKA--GKTKEALELL 434
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 182/332 (54%), Gaps = 7/332 (2%)
Query: 182 ELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+ +K +DE+++ + + T + ++ + + GR +DA+E + + YG E +T + ++++
Sbjct: 219 QAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVL 278
Query: 240 DTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
L E A K+ E K C P + FN+LI C+ V+ A + +++M Q G
Sbjct: 279 KGLFTAERWEDAEKLMEEMAHKGCPP-NVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGC 337
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+P+ +SY + +C++K K + ++ M +GC P +++Y ++ AL + +++ A++
Sbjct: 338 TPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIE 397
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ ++K C P Y+++I L+KAG+ K+A E+ ++M +G+ P+++TY+T+ S C
Sbjct: 398 LLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLC 457
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETY-APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
E A++ K+++ +P Y A LL +C R++ ++ L +M + +
Sbjct: 458 REDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAID-LFAYMISSGCMPNE 516
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIV 508
TY LV GL G ++ A F ++ S+G+V
Sbjct: 517 STYTILVEGLAYEGLVKEARELFAQLCSRGVV 548
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 180/396 (45%), Gaps = 42/396 (10%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YN MV + + LV +M + Y T +T++R L GR +A+
Sbjct: 136 VYNAMVAGYCGAGQLDAARRLVADMPVEPDAY----TYNTLIRGLCGRGRTSNALAVLED 191
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTR 280
M + G D ++L++ K + + A K+ E D C P +N++++G C+
Sbjct: 192 MFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAP-DIVTYNVVLNGICQEG 250
Query: 281 KVDDA-----------------------------------QKAMKEMFQQGFSPDVVSYT 305
+V+DA +K M+EM +G P+VV++
Sbjct: 251 RVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFN 310
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I CR + L++M + GC P+ ++Y ++HA K K+I++A++ E M S
Sbjct: 311 MLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSR 370
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
C PD Y++L+ L + G V A E+ +K +G P +++YNT+I + + A
Sbjct: 371 GCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEA 430
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L+LL +M +PD TY+ + CR+ R++ + + A Y +++ G
Sbjct: 431 LELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLG 490
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + + A F MIS G +P STY +L E L
Sbjct: 491 LCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGL 526
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
PD Y++++ AG++ A + DM V P+ TYNT+I C R NAL +
Sbjct: 132 PDVMVYNAMVAGYCGAGQLDAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAV 188
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
L+ M C PD TY LL+ C++ K LL M + D TY ++ G+ +
Sbjct: 189 LEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQ 248
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
G++E A F + + S G P +Y ++ + L E++ + +AH
Sbjct: 249 EGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAH 299
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 164/333 (49%), Gaps = 5/333 (1%)
Query: 137 FSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS 196
+ +L A + Q G TP MYN V L KS K E+VK M +
Sbjct: 30 LAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKD-GACKPD 88
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T +T++ L + GR D+A + M++ G + + L++ L A V +
Sbjct: 89 VVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV-M 147
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ-GFSPDVVSYTCFIEHYCREK 315
+ P +Q +N +IHG+CK+ ++D A ++EM Q+ G SPD +Y+ I C+
Sbjct: 148 QGMTTTP-DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSS 206
Query: 316 DFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ RK D+ L+EM K C SV+ + ++ KA+ ++ A ++ M C PD Y
Sbjct: 207 NLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S++I L + G V + E M +G P+V+TY +++ C + A +L+++M E
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
D C P+ TY+ + C+ ++ + N LLT +
Sbjct: 327 DGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSI 359
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 92/364 (25%), Positives = 169/364 (46%), Gaps = 12/364 (3%)
Query: 175 KKFCLMWELVKEMDELNN-----GYVSLATM-STIMRRLVRGGRYDDAVEAFRGMKKYGV 228
+ CL EL MD L G +M + + L + G+ +A+E + MK
Sbjct: 26 RAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGAC 85
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
+ D + L+ L K ++ A +V E + + +N LI+G + +A
Sbjct: 86 KPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVL 145
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GCKPSVITYTIVMHAL 346
M+ M +PD +Y I +C+ + + L+EM+++ GC P TY+I+++ L
Sbjct: 146 VMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGL 202
Query: 347 GKAKQINEALKVYEKM-KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K+ + +A ++ ++M DC +++L+ KA + A E+ M + G P+
Sbjct: 203 CKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPD 262
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
V+TY+T+I C + + LL+KM CKPD TY L+ C+ +M L+
Sbjct: 263 VVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVK 322
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
M ++ + +A TY+ + GL + KL++A + KG + ++ L ++K+
Sbjct: 323 RMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSVKKRL 382
Query: 526 LGNA 529
L A
Sbjct: 383 LDRA 386
>gi|356516744|ref|XP_003527053.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 882
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 176/357 (49%), Gaps = 6/357 (1%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V+ + IL KQ + +AL S+ Q L++ D + A FF W K Q G
Sbjct: 324 VEGVKDIL-KQLRWGPATEKALYNLNFSIDAYQANQILKQLQ-DHSVALSFFYWLKRQPG 381
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ H Y TMV +LG++++F + +L+++M + + ++ T + ++ R +A
Sbjct: 382 FWHDGHTYTTMVGILGRAREFGAINKLLEQMVK-DGCQPNVVTYNRLIHSYGRANYLGEA 440
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NILIH 274
+ F M++ G E D L+D K ++ A ++ ++ + LS F +++I+
Sbjct: 441 LNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQE-VGLSPDTFTYSVMIN 499
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
K+ + A + EM QG P++V+Y I + ++++ ++MQ G KP
Sbjct: 500 CLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKP 559
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+TY+IVM LG + EA V+ +MK ++ +PD Y LI + KAG V+ A E +
Sbjct: 560 DKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWY 619
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
M + G++PNV T N+++S+ +A LLQ M P +TY LL C
Sbjct: 620 HAMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCC 676
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 131/261 (50%), Gaps = 1/261 (0%)
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ R+ K +++M + G P+VV+Y I Y R + + +MQE GC+P +
Sbjct: 398 RAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQMQEMGCEPDRV 457
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++ KA ++ A+ +YE+M+ PDT YS +I L K+G + A+ +F +M
Sbjct: 458 TYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEM 517
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
QG VPN++TYN +I+ + ALKL + M+ KPD TY+ ++++ +
Sbjct: 518 VDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIVMEVLGYCGYL 577
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST-YKM 516
+ + M +N+ D Y L+ ++G +E A ++ M+ G++P T +
Sbjct: 578 EEAEAVFFEMKQNNWVPDEPVYGLLIDLWGKAGNVEKAWEWYHAMLRAGLLPNVPTCNSL 637
Query: 517 LEEKLEKKRLGNAKERINKLL 537
L L RL +A + ++
Sbjct: 638 LSAFLRVHRLPDAYNLLQNMV 658
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 113/224 (50%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q GF D +YT + R ++F ++ L++M + GC+P+V+TY ++H+ G+A +
Sbjct: 379 QPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLG 438
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EAL V+ +M+ C PD Y +LI I +KAG + A ++E M++ G+ P+ TY+ MI
Sbjct: 439 EALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMI 498
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ A +L +M + C P+ TY L+ + + + + L M
Sbjct: 499 NCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFK 558
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
D TY+ ++ L G LE A + F EM VP Y +L
Sbjct: 559 PDKVTYSIVMEVLGYCGYLEEAEAVFFEMKQNNWVPDEPVYGLL 602
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%)
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYT ++ LG+A++ K+ E+M D C P+ Y+ LI +A + +A +F M
Sbjct: 388 TYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLGEALNVFNQM 447
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
++ G P+ +TY T+I + A+ + ++M+E PD TY+ ++ + +
Sbjct: 448 QEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNL 507
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ L M + TY L+ ++ + A + +M + G P TY ++
Sbjct: 508 SAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALKLYRDMQNAGFKPDKVTYSIV 567
Query: 518 EEKL 521
E L
Sbjct: 568 MEVL 571
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 164/333 (49%), Gaps = 5/333 (1%)
Query: 137 FSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS 196
+ +L A + Q G TP MYN V L KS K E+VK M +
Sbjct: 30 LAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKD-GACKPD 88
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T +T++ L + GR D+A + M++ G + + L++ L A V +
Sbjct: 89 VVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLV-M 147
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ-GFSPDVVSYTCFIEHYCREK 315
+ P +Q +N +IHG+CK+ ++D A ++EM Q+ G SPD +Y+ I C+
Sbjct: 148 QGMTTTP-DTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSS 206
Query: 316 DFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ RK D+ L+EM K C SV+ + ++ KA+ ++ A ++ M C PD Y
Sbjct: 207 NLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTY 266
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S++I L + G V + E M +G P+V+TY +++ C + A +L+++M E
Sbjct: 267 STIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLE 326
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
D C P+ TY+ + C+ ++ + N LLT +
Sbjct: 327 DGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSI 359
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 169/364 (46%), Gaps = 12/364 (3%)
Query: 175 KKFCLMWELVKEMDELNN-----GYVSLATM-STIMRRLVRGGRYDDAVEAFRGMKKYGV 228
+ CL EL MD L G +M + + L + G+ +A+E + MK
Sbjct: 26 RAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGAC 85
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
+ D + L+ L K ++ A +V E + + +N LI+G + +A
Sbjct: 86 KPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVL 145
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GCKPSVITYTIVMHAL 346
M+ M +PD +Y I +C+ + + L+EM+++ GC P TY+I+++ L
Sbjct: 146 VMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGL 202
Query: 347 GKAKQINEALKVYEKM-KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K+ + +A ++ ++M DC +++L+ KA + A E+ M + G P+
Sbjct: 203 CKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPD 262
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
V+TY+T+I C + + LL+KM CKPD TY L+ C+ +M L+
Sbjct: 263 VVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVK 322
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
M ++ + +A TY+ + GL + KL++A + KG V ++ L ++K+
Sbjct: 323 RMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKKRL 382
Query: 526 LGNA 529
L A
Sbjct: 383 LDRA 386
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 175/363 (48%), Gaps = 2/363 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ + K+K + L ++MD + T++ ++ L R D A A +
Sbjct: 73 FNRLLTSIAKTKHHSTLLSLSRQMDSFGIP-PDVYTLAIVINSLCHLNRVDFAFSALAKI 131
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
K G + D + L+ L + A +F + + + + LI+G CK
Sbjct: 132 LKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNT 191
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A + ++ M Q P+VV ++ I+ C+++ + + EM KG P+++TY +
Sbjct: 192 SAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 251
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+H L K + + +M +PD ++++ L K G V +A+++ + M +GV
Sbjct: 252 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PNV+TYN ++ C R+E + A+K+ M C + +Y L+ C+ + + +
Sbjct: 312 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 371
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L M + +++ + TY +L+ GL G+L+ A S F EM+++G +P TY+ L + L
Sbjct: 372 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 431
Query: 523 KKR 525
K R
Sbjct: 432 KNR 434
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 176/385 (45%), Gaps = 5/385 (1%)
Query: 145 FGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMST 202
F F AK + G+ + T++ L K L +M + G+ ++ T T
Sbjct: 123 FAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM--IGEGFQPNVVTYGT 180
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDC 261
++ L + G A+ R M++ + + S L+D+L K V A+ +F E
Sbjct: 181 LINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKG 240
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
I + +N LIHG CK + M EM PDV + ++ C+E +
Sbjct: 241 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 300
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D + M +G +P+V+TY +M +++ A+KV++ M DC+ + Y++LI
Sbjct: 301 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 360
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K V A +FE+M +Q + PN +TYNT+I C ++A+ L +M PD
Sbjct: 361 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 420
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L C+ + + LL + ++ D Y +++ G+ +G+LE A F
Sbjct: 421 VTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 480
Query: 502 MISKGIVPYHSTYKMLEEKLEKKRL 526
+ SKG+ P TY ++ L K+ L
Sbjct: 481 LSSKGLQPNVWTYNIMIHGLCKQGL 505
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 163/373 (43%), Gaps = 4/373 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
+++T++D L K ++ + + EM + G ++ T ++++ L + +
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEM--ITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMN 269
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTR 280
M + D L+ ++D L K V A+ V + + + +N L+ G C
Sbjct: 270 EMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 329
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+VD A K M + +V+SY I YC+ + K +EM + P+ +TY
Sbjct: 330 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYN 389
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++H L ++ +A+ ++ +M + +PD Y +L L K + A + + ++
Sbjct: 390 TLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGS 449
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
P++ Y T++ C E E+A L + +P+ TY ++ C++ +
Sbjct: 450 NWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEA 509
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+ L + M KN S + TY + RG + + + EEM+++G ST +L
Sbjct: 510 SKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 569
Query: 521 LEKKRLGNAKERI 533
L L + ++I
Sbjct: 570 LSDDGLDQSVKQI 582
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 119/258 (46%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A M + P V + + + K + ++M G P V T I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+++L +++ A K+ PD + +++LI L G++ +A +F+ M +G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PNV+TY T+I+ C A++LL+ ME+ C+P+ ++ L+ C+ +++
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ + M +S + TY SL+ GL + + + + EM+ I+P T + + L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Query: 522 EKKRLGNAKERINKLLAH 539
K+ + + ++ H
Sbjct: 291 CKEGMVAEAHDVVDMMIH 308
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 109/255 (42%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P S+ FN L+ KT+ ++M G PDV + I C
Sbjct: 67 PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFS 126
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L ++ + G +P T+T ++ L +I EAL +++KM + P+ Y +LI L
Sbjct: 127 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 186
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K G A + M++ PNV+ ++T+I S C + A + +M P+
Sbjct: 187 KVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIV 246
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ C+ K + L+ M + + D T ++V L + G + A + M
Sbjct: 247 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 306
Query: 503 ISKGIVPYHSTYKML 517
I +G+ P TY L
Sbjct: 307 IHRGVEPNVVTYNAL 321
>gi|125537564|gb|EAY84052.1| hypothetical protein OsI_39281 [Oryza sativa Indica Group]
Length = 762
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 165/323 (51%), Gaps = 6/323 (1%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
+D T A GFF W K Q G+ H Y TM+ +LG++++F M +L+ EM+ ++ ++
Sbjct: 344 HDHTIALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHC-KPTVV 402
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + I+ R +AV+ F M+K G E D L+D KG +E A ++
Sbjct: 403 TYNRIIHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRM 462
Query: 259 KDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
++ + LS F + +++ K + A K EM + G +P++V+Y I + ++
Sbjct: 463 QE-VGLSPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARN 521
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ V K+MQ G +P ITY+IVM LG ++EA V+ +M+ D PD Y
Sbjct: 522 YENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMR-HDWAPDEPVYGL 580
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ + KAG V A + M + G+ PNV T N+++S+ + ++A +LQ M
Sbjct: 581 LVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQG 640
Query: 437 CKPDCETYAPLLKMCCRKKRMKV 459
P +TY LL CC + + ++
Sbjct: 641 LVPSLQTYTLLLS-CCTEAQAQM 662
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 127/273 (46%), Gaps = 2/273 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ +I + R+ +K + EM P VV+Y I Y R R+ +EMQ
Sbjct: 369 YTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLREAVKVFEEMQ 428
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+ G +P +TY ++ K + A+ +Y +M+ PDT YS+++ L K G +
Sbjct: 429 KAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMVNCLGKGGHLA 488
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
A ++F +M + G PN++TYN MI+ EN +KL + M+ +PD TY+ ++
Sbjct: 489 AAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFRPDKITYSIVM 548
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
++ + + M ++D + D Y LV ++G ++ A ++ M+ G+
Sbjct: 549 EVLGHCGHLDEAEAVFIEM-RHDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQ 607
Query: 509 PYHST-YKMLEEKLEKKRLGNAKERINKLLAHA 540
P T +L L+ R +A + +LA
Sbjct: 608 PNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQG 640
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 106/209 (50%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q GF D SYT I + + F + L EM CKP+V+TY ++HA G+A +
Sbjct: 359 QPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYLR 418
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EA+KV+E+M+ PD Y +LI I +K G ++ A +++ M++ G+ P+ TY+ M+
Sbjct: 419 EAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAMV 478
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ A KL +M E+ C P+ TY ++ + + + + + L M
Sbjct: 479 NCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFR 538
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEM 502
D TY+ ++ L G L+ A + F EM
Sbjct: 539 PDKITYSIVMEVLGHCGHLDEAEAVFIEM 567
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 148/308 (48%), Gaps = 11/308 (3%)
Query: 216 AVEAFRGMKKY-GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNIL 272
A+ F+ +K+ G + D + + ++ L + K+ E C P + +N +
Sbjct: 349 ALGFFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKP-TVVTYNRI 407
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
IH + + + +A K +EM + G+ PD V+Y I+ + + D MQE G
Sbjct: 408 IHAYGRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGL 467
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P TY+ +++ LGK + A K++ +M + C P+ Y+ +I + +KA ++ +
Sbjct: 468 SPDTFTYSAMVNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVK 527
Query: 393 IFEDMKKQGVVPNVLTYNTMIS--SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+++DM+ G P+ +TY+ ++ C +E A+ + +M D PD Y L+ +
Sbjct: 528 LYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFI--EMRHDWA-PDEPVYGLLVDL 584
Query: 451 CCRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ + K L + M ++ + + T SL+ ++ + + A S + M+++G+VP
Sbjct: 585 WGKAGNVDKALGWYHA-MLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVP 643
Query: 510 YHSTYKML 517
TY +L
Sbjct: 644 SLQTYTLL 651
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 92/194 (47%)
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++ G K +YT ++ LG+A+Q K+ ++M S C P Y+ +I +A +
Sbjct: 358 RQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAYGRANYL 417
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
++A ++FE+M+K G P+ +TY T+I E A+ L +M+E PD TY+ +
Sbjct: 418 REAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDTFTYSAM 477
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + + L M +N + + TY ++ ++ E +++M G
Sbjct: 478 VNCLGKGGHLAAAYKLFCEMVENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGF 537
Query: 508 VPYHSTYKMLEEKL 521
P TY ++ E L
Sbjct: 538 RPDKITYSIVMEVL 551
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/275 (21%), Positives = 113/275 (41%), Gaps = 34/275 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ MV+ LGK ++L EM E N +L T + ++ + Y++ V+ ++ M
Sbjct: 474 YSAMVNCLGKGGHLAAAYKLFCEMVE-NGCTPNLVTYNIMIALQAKARNYENVVKLYKDM 532
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
+ G D S++M+ L ++ A VF+E + ++ +L+ W K VD
Sbjct: 533 QVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRHDWAPDEPVYGLLVDLWGKAGNVD 592
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A M Q G P+V + + + + F+ L+ M +G PS+ TYT+++
Sbjct: 593 KALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLL 652
Query: 344 HALGKAK--------------------------------QINEALKVY-EKMKSDDCLPD 370
+A+ + + + + + M S+D
Sbjct: 653 SCCTEAQAQMGLCCQLMAITGHPAHMFLLYLPDAEPGGQNVRDHTRYFLDMMHSEDRESK 712
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
++I L K+G ++A I+E ++ V P+
Sbjct: 713 RGLMDAVIDFLHKSGLKEEAGFIWEVAAQRNVYPD 747
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 1/132 (0%)
Query: 393 IFEDMKKQ-GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
F+ +K+Q G + +Y TMI + KLL +M CKP TY ++
Sbjct: 352 FFQWLKRQPGFKHDGHSYTTMIGILGQARQFGTMRKLLDEMNSVHCKPTVVTYNRIIHAY 411
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
R ++ + M K D TY +L+ + G LE+A + M G+ P
Sbjct: 412 GRANYLREAVKVFEEMQKAGYEPDRVTYCTLIDIHAKGGYLEVAMDLYTRMQEVGLSPDT 471
Query: 512 STYKMLEEKLEK 523
TY + L K
Sbjct: 472 FTYSAMVNCLGK 483
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 112/420 (26%), Positives = 196/420 (46%), Gaps = 46/420 (10%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVRGGRY 213
+TP++ Y+T+++ + + +W+L+++M + N Y T +I+ L R +
Sbjct: 700 YTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSY----TYGSIIGLLCRICKL 755
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIP-------- 263
+A EAF M G+ DT + L+D K + A K F E +D P
Sbjct: 756 AEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAI 815
Query: 264 ------------------------LSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
L I F L++G+CK + DA + M Q G
Sbjct: 816 ISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGC 875
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
SP+VV+YT I+ C+E D ++ L EM + G +P++ TY +++ L K+ I EA+K
Sbjct: 876 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVK 935
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ + ++ DT Y++L+ K+G + A EI +M +G+ P ++T+N +++ C
Sbjct: 936 LVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFC 995
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E+ KLL M P+ T+ L+K C + +K + M V D
Sbjct: 996 LHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGK 1055
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK-LEKKRLGNAKERINKL 536
TY +LV+G + ++ A F+EM KG STY +L + ++K+ A+E +++
Sbjct: 1056 TYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/331 (30%), Positives = 167/331 (50%), Gaps = 8/331 (2%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG-NSVEHAYKVFLEFKD---CI 262
LV G +A + F M YG+ + +V + L K N A VF EF + C
Sbjct: 608 LVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVCW 667
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
++S +NI+IH C+ ++++A + M +G++PDV+SY+ I YCR + KV
Sbjct: 668 NVAS--YNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWK 725
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+++M++KG KP+ TY ++ L + ++ EA + + +M LPDT Y++L+
Sbjct: 726 LIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFC 785
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K G ++ A++ F +M + + P+VLTY +IS C + A KL +M +PD
Sbjct: 786 KRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDII 845
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
T+ L+ C+ +K + HM + S + TY +L+ GL + G L+ A EM
Sbjct: 846 TFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEM 905
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
G+ P TY + L K GN +E +
Sbjct: 906 WKIGLQPNIFTYNSIVNGLCKS--GNIEEAV 934
>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Cucumis sativus]
Length = 904
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 178/360 (49%), Gaps = 4/360 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y ++++ LG+ + ++L ++M + N + ++++R + GR +D + + M
Sbjct: 482 YCSLIEGLGRHGRVDEAYKLYEQMLDANQ-IPNAVVYTSLIRNFFKCGRKEDGHKIYNEM 540
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRK 281
+ G D L+ MD + K +E +F E K+ IP ++ + ILIHG K
Sbjct: 541 LRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP-DARSYTILIHGLVKAGF 599
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+A + M +QG D +Y I+ +C+ K L+EM+ KG +P+V+TY
Sbjct: 600 AHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGS 659
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ L K +++EA ++E+ KS + YSSLI K GR+ +A I E++ ++G
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PNV T+N ++ + E AL Q M++ C P+ TY+ L+ C+ ++
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M K + TY +++ GL ++G + A + FE+ KG V + Y + E L
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 207/441 (46%), Gaps = 17/441 (3%)
Query: 90 SENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT 149
+EN +D + +IL V L ++ + LV LRR D+ A +F
Sbjct: 61 NENKRQVIDSVCQILETGPWGSS-VENRLAELDLNPNPELVIGVLRRLK-DVNNAVNYFR 118
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
WA+ T H E YN+++ V+ +++KF + ++++EM G S T I+ ++
Sbjct: 119 WAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFG-PSNNTCIEIVLSFIK 177
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQI 268
+ +A + M+K A + L+ L + +F + ++ ++ +
Sbjct: 178 SRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHL 237
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
F LI + + +VD A + EM PDVV Y I+ + + EM+
Sbjct: 238 FTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMK 297
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
G +TYT ++ L KA ++NEA++++E M + +P Y+++I AG+ +
Sbjct: 298 ANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFE 357
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
DA + E +++G +P+V++YN ++S + + + ALK ++M++D P+ TY ++
Sbjct: 358 DAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMI 416
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS------LVRGLIESGKLELACSFFEEM 502
M C+ +++ T + D DAG + + +V L ++ +L+ ACS FE +
Sbjct: 417 DMLCKAGKLE------TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470
Query: 503 ISKGIVPYHSTYKMLEEKLEK 523
K P TY L E L +
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGR 491
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 175/382 (45%), Gaps = 6/382 (1%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMST 202
A+ FF K G + Y +M+ VL K+ + EL + MD+ N V A +T
Sbjct: 289 AWKFFHEMKAN-GLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQ--NKQVPCAYAYNT 345
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DC 261
++ G+++DA ++ G + + ++ L + V+ A K F E K D
Sbjct: 346 MIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDA 405
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
IP S +NI+I CK K++ A M G P+V++ ++ C+ +
Sbjct: 406 IPNLST-YNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDAC 464
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ + K C+P +TY ++ LG+ +++EA K+YE+M + +P+ Y+SLI
Sbjct: 465 SIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNF 524
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K GR +D ++I+ +M + G P++L NT + E E L Q+++ PD
Sbjct: 525 FKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDA 584
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
+Y L+ + L M + +D Y +++ G +SGK+ A EE
Sbjct: 585 RSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEE 644
Query: 502 MISKGIVPYHSTYKMLEEKLEK 523
M +KG P TY + + L K
Sbjct: 645 MKTKGHEPTVVTYGSVIDGLAK 666
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 177/364 (48%), Gaps = 4/364 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN M+D+L K+ K +V++ + + ++ T++ ++ RL + R DDA F G+
Sbjct: 412 YNIMIDMLCKAGKLETAL-VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRK 281
D L++ L + V+ AYK++ + D IP ++ ++ LI + K +
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIP-NAVVYTSLIRNFFKCGR 529
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D K EM + G SPD++ +++ + + K +E++ G P +YTI
Sbjct: 530 KEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTI 589
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H L KA +EA +++ MK C+ DT Y+++I K+G+V A ++ E+MK +G
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P V+TY ++I + A L ++ + + + Y+ L+ + R+
Sbjct: 650 HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAY 709
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
++ + + ++ + T+ L+ L+++ ++ A F+ M P + TY +L L
Sbjct: 710 LIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGL 769
Query: 522 EKKR 525
K R
Sbjct: 770 CKIR 773
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 147/294 (50%), Gaps = 2/294 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G++ Y ++ L K+ +EL M E + +T++ + G+ +
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKE-QGCVLDTRAYNTVIDGFCKSGKVNK 637
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIH 274
A + MK G E ++D L K + ++ AY +F E K I L+ I++ LI
Sbjct: 638 AYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLID 697
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+ K ++D+A M+E+ Q+G +P+V ++ C ++ + ++ + + M++ C P
Sbjct: 698 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTP 757
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ ITY+I++H L K ++ N+A +++M+ P+ Y+++I L+KAG + +A+ +F
Sbjct: 758 NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLF 817
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
E K++G V + YN +I + +A +L ++ C +T LL
Sbjct: 818 EKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLL 871
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+ +N L+ +TRK + ++ ++EM GF P + + + + + R+ ++
Sbjct: 131 EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M++ +P+ YT ++ AL ++ + L ++++M+ + +++LI + ++ GR
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
V A + ++MK + P+V+ YN I + + A K +M+ + D TY
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTS 310
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++ + C+ R+ L HM +N A Y +++ G +GK E A S E KG
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370
Query: 507 IVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
+P +Y + L +K G E + K
Sbjct: 371 CIPSVVSYNCILSCLGRK--GQVDEALKKF 398
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 42/274 (15%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM---------------- 187
A+ F K Q + T YNT++D KS K ++L++EM
Sbjct: 603 AYELFYTMKEQGCVLDT-RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661
Query: 188 ------DELNNGY------------VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
D L+ Y +++ S+++ + GR D+A + + G+
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 721
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQK 287
+ + L+D LVK + A F KD C P + ++ILIHG CK RK + A
Sbjct: 722 PNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTP-NYITYSILIHGLCKIRKFNKAFV 780
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+EM +QGF P+V +YT I + + + D ++ +EKG Y ++ L
Sbjct: 781 FWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLS 840
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
A + ++A +++E+ + C S Y+ +L
Sbjct: 841 NANRASDAYRLFEEARLKGC----SIYTKTCVVL 870
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 105/361 (29%), Positives = 177/361 (49%), Gaps = 16/361 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N M+ L + K EL+++M N T +T++ GR A+E R M
Sbjct: 119 FNIMLRHLCATGKPVRALELLRQMPRPNA-----VTYNTVIAGFCARGRVQAALEVMREM 173
Query: 224 K-KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
+ + G+ D + L+ K +E A KVF E + + S+ ++N LI G+C
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRG 233
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+D A + ++M Q+G + V +Y + + L+EMQ G P V TY
Sbjct: 234 KLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYN 293
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ K +AL+V+E+M Y+SLI+ S+ G+V++ + +F+ K+
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKK 353
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+V+ YN +I+S CA + E A +++ +ME+ PD TY L++ C R+
Sbjct: 354 GIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEA 413
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L+ M K + D G L ++G+ + A + +EM+ KGI P STY L E
Sbjct: 414 RGLIDEMTKRGIQPDLG--------LCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEG 465
Query: 521 L 521
L
Sbjct: 466 L 466
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 108/236 (45%), Gaps = 6/236 (2%)
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
++ + H C + + L++M +P+ +TY V+ ++ AL+V +M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMREM 173
Query: 363 KSDDCL-PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG-VVPNVLTYNTMISSACARS 420
+ + PD Y++LI K GR++DA ++F++M QG V P+ + YN +I C R
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRG 233
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+ + AL+ + M + TY L+ R +L M +N +S D TY
Sbjct: 234 KLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYN 293
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
L+ G + G + A FEEM KG+ TY L +K +R+ K+
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKV 349
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/310 (20%), Positives = 121/310 (39%), Gaps = 45/310 (14%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL 118
+PD+ ++GW + R+ + +++ +L++ + L Y K+ AL
Sbjct: 180 APDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRGKLDVAL 239
Query: 119 --------KGCGVSVS--NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEM----- 163
+G ++V+ N LV F + Y EM
Sbjct: 240 QYREDMVQRGVAMTVATYNLLVH--------------ALFMDGRASDAYAVLEEMQRNGL 285
Query: 164 ------YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
YN +++ K E+ +EM + T ++++ R G+ +
Sbjct: 286 SPDVFTYNILINGYCKEGNEKKALEVFEEMSR-KGVRATAVTYTSLIYAFSRKGQVQETD 344
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGW 276
F+ K G+ D + L+++ G +E A+++ E K IP +N LI G+
Sbjct: 345 RLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGF 404
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
C ++D+A+ + EM ++G PD+ C+ ++ +KEM KG P
Sbjct: 405 CLLGRLDEARGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDD 456
Query: 337 ITYTIVMHAL 346
TY ++ L
Sbjct: 457 STYISLIEGL 466
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 88/180 (48%), Gaps = 12/180 (6%)
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDC-LPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+++ A A+ +L+ Y ++KS +P S + L + S A +F D+ +
Sbjct: 55 LLLTASAAARPHATSLRFYAQLKSLSVPIPVASLHPLLSSLPSAP-----AFALFADIYR 109
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+ T+N M+ CA + AL+LL++M +P+ TY ++ C + R++
Sbjct: 110 LRLPLCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQA 165
Query: 460 LNFLLTHMF-KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG-IVPYHSTYKML 517
++ M + ++ D TYA+L+ G + G++E A F+EM+++G + P Y L
Sbjct: 166 ALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNAL 225
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 181/363 (49%), Gaps = 8/363 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ + ++++EM E + T T++ + GR D+AV+ F M
Sbjct: 148 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 207
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-----CIPLSSQIFNILIHGWCK 278
G + + +V+ + L+ G + L ++D + ++ +N+L+H
Sbjct: 208 LTKG---EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 264
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ +A + ++EM +G +PDV +Y I +C+E + +K + + M +G + +V+T
Sbjct: 265 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 324
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT +++AL K Q+ E K++++ PD Y++LI S +G + A EI +M+
Sbjct: 325 YTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 384
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
K+ + P+ +TYNT++ C + A KL+ +M E +PD TY L+ K +K
Sbjct: 385 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVK 444
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
+ M + TY +L++GL ++G+ + A + +EM+ GI P STY L
Sbjct: 445 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 504
Query: 519 EKL 521
E L
Sbjct: 505 EGL 507
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 179/375 (47%), Gaps = 8/375 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N M+ L + K EL+++M N T +T++ GR A++ R M
Sbjct: 117 FNIMLRHLCSAGKPARALELLRQMPRPNA-----VTYNTVIAGFCSRGRVQAALDIMREM 171
Query: 224 K-KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
+ + G+ + ++ K V+ A KVF E K + + ++N LI G+C
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 231
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+D A M ++G + V +Y + + + + ++EM KG P V TY
Sbjct: 232 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 291
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ K + +AL+++E M Y++LI+ LSK G+V++ +++F++ ++
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 351
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+++ YN +I+S + A +++ +ME+ PD TY L++ C R+
Sbjct: 352 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 411
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L+ M + + D TY +L+ G G ++ A EM++KG P TY L +
Sbjct: 412 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 471
Query: 521 LEKKRLGNAKERINK 535
L K G+ E + K
Sbjct: 472 LCKNGQGDDAENMVK 486
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 132/270 (48%), Gaps = 7/270 (2%)
Query: 251 AYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
A+ +F + F+ +PL + FNI++ C K A + +++M + P+ V+Y I
Sbjct: 98 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 153
Query: 310 HYCREKDFRKVDDTLKEMQEK-GCKPSVITYTIVMHALGKAKQINEALKVYEKMKS-DDC 367
+C + D ++EM+E+ G P+ TY V+ K +++EA+KV+++M + +
Sbjct: 154 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 213
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P+ Y++LI G++ A + M ++GV V TYN ++ + A +
Sbjct: 214 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 273
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L+++M PD TY L+ C++ +K + +M + V TY +L+ L
Sbjct: 274 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALS 333
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ G+++ F+E + +GI P Y L
Sbjct: 334 KKGQVQETDKLFDEAVRRGIRPDLVLYNAL 363
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 128/281 (45%), Gaps = 18/281 (6%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG--- 210
+ G T YN +V L + +ELV+EM G LA L+ G
Sbjct: 245 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM-----GGKGLAPDVFTYNILINGHCK 299
Query: 211 -GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQI 268
G A+E F M + GV + L+ L K V+ K+F E + I +
Sbjct: 300 EGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 359
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC---REKDFRKVDDTLK 325
+N LI+ + +D A + M EM ++ +PD V+Y + C R + RK+ D
Sbjct: 360 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID--- 416
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM E+G +P ++TY ++ + +AL++ +M + P Y++LI L K G
Sbjct: 417 EMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 476
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+ DA + ++M + G+ P+ TY ++I +E+E A+
Sbjct: 477 QGDDAENMVKEMVENGITPDDSTYISLIEGLT--TEDERAI 515
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YN +++ S +E++ EM++ + T +T+MR L GR D+A +
Sbjct: 359 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV-TYNTLMRGLCLLGRVDEARKLIDE 417
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-----------FNI 271
M + G++ D LV N++ Y + + KD + + +++ +N
Sbjct: 418 MTERGIQPD----------LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 467
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
LI G CK + DDA+ +KEM + G +PD +Y IE E D R +DD
Sbjct: 468 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE-DERAIDD 517
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 81/165 (49%), Gaps = 10/165 (6%)
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
+L++Y +MKS T+ L+ L A A +F DM + + T+N M+
Sbjct: 67 SLRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLR 122
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK-VLNFLLTHMFKNDVS 473
C+ + AL+LL++M +P+ TY ++ C + R++ L+ + + ++
Sbjct: 123 HLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIA 178
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIV-PYHSTYKML 517
+ TY +++ G + G+++ A F+EM++KG V P Y L
Sbjct: 179 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNAL 223
>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g06920-like [Cucumis sativus]
Length = 904
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 178/360 (49%), Gaps = 4/360 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y ++++ LG+ + ++L ++M + N + ++++R + GR +D + + M
Sbjct: 482 YCSLIEGLGRHGRVDEAYKLYEQMLDANQ-IPNAVVYTSLIRNFFKCGRKEDGHKIYNEM 540
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRK 281
+ G D L+ MD + K +E +F E K+ IP ++ + ILIHG K
Sbjct: 541 LRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP-DARSYTILIHGLVKAGF 599
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+A + M +QG D +Y I+ +C+ K L+EM+ KG +P+V+TY
Sbjct: 600 AHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGS 659
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ L K +++EA ++E+ KS + YSSLI K GR+ +A I E++ ++G
Sbjct: 660 VIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKG 719
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PNV T+N ++ + E AL Q M++ C P+ TY+ L+ C+ ++
Sbjct: 720 LTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAF 779
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M K + TY +++ GL ++G + A + FE+ KG V + Y + E L
Sbjct: 780 VFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGL 839
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/441 (24%), Positives = 207/441 (46%), Gaps = 17/441 (3%)
Query: 90 SENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFT 149
+EN +D + +IL V L ++ + LV LRR D+ A +F
Sbjct: 61 NENKRQVIDSVCQILETGPWGSS-VENRLAELDLNPNPELVIGVLRRLK-DVNNAVNYFR 118
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
WA+ T H E YN+++ V+ +++KF + ++++EM G S T I+ ++
Sbjct: 119 WAERLTDRAHCREAYNSLLMVMARTRKFNCLEQILEEMSIAGFG-PSNNTCIEIVLSFIK 177
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQI 268
+ +A + M+K A + L+ L + +F + ++ ++ +
Sbjct: 178 SRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHL 237
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
F LI + + +VD A + EM PDVV Y I+ + + EM+
Sbjct: 238 FTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMK 297
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
G +TYT ++ L KA ++NEA++++E M + +P Y+++I AG+ +
Sbjct: 298 ANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFE 357
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
DA + E +++G +P+V++YN ++S + + + ALK ++M++D P+ TY ++
Sbjct: 358 DAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMI 416
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS------LVRGLIESGKLELACSFFEEM 502
M C+ +++ T + D DAG + + +V L ++ +L+ ACS FE +
Sbjct: 417 DMLCKAGKLE------TALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470
Query: 503 ISKGIVPYHSTYKMLEEKLEK 523
K P TY L E L +
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGR 491
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 168/362 (46%), Gaps = 5/362 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRG 222
Y +M+ VL K+ + EL + MD+ N V A +T++ G+++DA
Sbjct: 308 YTSMIGVLCKADRLNEAVELFEHMDQ--NKQVPCAYAYNTMIMGYGMAGKFEDAYSLLER 365
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRK 281
++ G + + ++ L + V+ A K F E K D IP S +NI+I CK K
Sbjct: 366 QRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAIPNLST-YNIMIDMLCKAGK 424
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++ A M G P+V++ ++ C+ + + + K C+P +TY
Sbjct: 425 LETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCS 484
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ LG+ +++EA K+YE+M + +P+ Y+SLI K GR +D ++I+ +M + G
Sbjct: 485 LIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLG 544
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P++L NT + E E L Q+++ PD +Y L+ +
Sbjct: 545 CSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAY 604
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M + +D Y +++ G +SGK+ A EEM +KG P TY + + L
Sbjct: 605 ELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGL 664
Query: 522 EK 523
K
Sbjct: 665 AK 666
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 177/364 (48%), Gaps = 4/364 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN M+D+L K+ K +V++ + + ++ T++ ++ RL + R DDA F G+
Sbjct: 412 YNIMIDMLCKAGKLETAL-VVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGL 470
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRK 281
D L++ L + V+ AYK++ + D IP ++ ++ LI + K +
Sbjct: 471 DHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIP-NAVVYTSLIRNFFKCGR 529
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D K EM + G SPD++ +++ + + K +E++ G P +YTI
Sbjct: 530 KEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTI 589
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H L KA +EA +++ MK C+ DT Y+++I K+G+V A ++ E+MK +G
Sbjct: 590 LIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKG 649
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P V+TY ++I + A L ++ + + + Y+ L+ + R+
Sbjct: 650 HEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAY 709
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
++ + + ++ + T+ L+ L+++ ++ A F+ M P + TY +L L
Sbjct: 710 LIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGL 769
Query: 522 EKKR 525
K R
Sbjct: 770 CKIR 773
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 147/294 (50%), Gaps = 2/294 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G++ Y ++ L K+ +EL M E + +T++ + G+ +
Sbjct: 579 GFIPDARSYTILIHGLVKAGFAHEAYELFYTMKE-QGCVLDTRAYNTVIDGFCKSGKVNK 637
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIH 274
A + MK G E ++D L K + ++ AY +F E K I L+ I++ LI
Sbjct: 638 AYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLID 697
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+ K ++D+A M+E+ Q+G +P+V ++ C ++ + ++ + + M++ C P
Sbjct: 698 GFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTP 757
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ ITY+I++H L K ++ N+A +++M+ P+ Y+++I L+KAG + +A+ +F
Sbjct: 758 NYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLF 817
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
E K++G V + YN +I + +A +L ++ C +T LL
Sbjct: 818 EKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLL 871
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 126/270 (46%), Gaps = 2/270 (0%)
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+ +N L+ +TRK + ++ ++EM GF P + + + + + R+ ++
Sbjct: 131 EAYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQT 190
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M++ +P+ YT ++ AL ++ + L ++++M+ + +++LI + ++ GR
Sbjct: 191 MRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGR 250
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
V A + ++MK + P+V+ YN I + + A K +M+ + D TY
Sbjct: 251 VDAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTS 310
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++ + C+ R+ L HM +N A Y +++ G +GK E A S E KG
Sbjct: 311 MIGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKG 370
Query: 507 IVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
+P +Y + L +K G E + K
Sbjct: 371 CIPSVVSYNCILSCLGRK--GQVDEALKKF 398
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 42/274 (15%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM---------------- 187
A+ F K Q + T YNT++D KS K ++L++EM
Sbjct: 603 AYELFYTMKEQGCVLDT-RAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVI 661
Query: 188 ------DELNNGY------------VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
D L+ Y +++ S+++ + GR D+A + + G+
Sbjct: 662 DGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLT 721
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQK 287
+ + L+D LVK + A F KD C P + ++ILIHG CK RK + A
Sbjct: 722 PNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTP-NYITYSILIHGLCKIRKFNKAFV 780
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+EM +QGF P+V +YT I + + + D ++ +EKG Y ++ L
Sbjct: 781 FWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLS 840
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
A + ++A +++E+ + C S Y+ +L
Sbjct: 841 NANRASDAYRLFEEARLKGC----SIYTKTCVVL 870
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 157/339 (46%), Gaps = 38/339 (11%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTR 280
M +G+ D L++L+++ + +A+ V + C P + FN LI G C
Sbjct: 176 MDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQP-DNTTFNTLIRGLCVEG 234
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+ +A + +GF PDVV+Y + C+ + L+ M +K C+P+VI Y
Sbjct: 235 KIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYN 294
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS------------------ 382
++ +L K +Q+ EA ++ +M + PD Y+SLI L
Sbjct: 295 TIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNS 354
Query: 383 -----------------KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
K G + A+++ + M K+GV P+V+TY ++ C RSE + A
Sbjct: 355 KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEA 414
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
+K+ M C P+ +Y L+ C+ +RM LL M + D TY +L+ G
Sbjct: 415 VKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHG 474
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
L G+L+ A + F EM++ G +P TY++L + L K
Sbjct: 475 LCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKN 513
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/332 (27%), Positives = 154/332 (46%), Gaps = 3/332 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T T+M L + G A+ R M + + A + ++D+L K V A+ +F
Sbjct: 255 VVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFS 314
Query: 257 EFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E +S IF N LIH C + + EM P+VV ++ ++ C+E
Sbjct: 315 EMIT-KGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKE 373
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
D + M ++G +P V+TYT +M +++EA+KV++ M C+P+ Y
Sbjct: 374 GMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSY 433
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ LI + R+ A + E M QG++ + +TYNT+I C ++A+ L +M
Sbjct: 434 NILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVA 493
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD TY LL C+ + LL + +++ D Y + G+ +G+LE
Sbjct: 494 SGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEA 553
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
A F + SKG+ P TY ++ L K+ L
Sbjct: 554 ARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGL 585
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 161/372 (43%), Gaps = 4/372 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++D L K ++ + L EM + G + T ++++ L +
Sbjct: 293 YNTIIDSLCKDRQVTEAFNLFSEM--ITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNE 350
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRK 281
M + + S ++D L K + A+ V + K + + L+ G C +
Sbjct: 351 MVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSE 410
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A K M +G P+V SY I YC+ + K L++M +G +TY
Sbjct: 411 MDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNT 470
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H L ++ A+ ++ +M + +PD Y L+ L K + +A + + ++
Sbjct: 471 LIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSN 530
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ ++L YN I C E E A L + +PD TY ++ C++ + N
Sbjct: 531 LDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEAN 590
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M +N S D Y +++RG + S + A +EM+++G ST ++ E L
Sbjct: 591 KLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVSTTTLIVEML 650
Query: 522 EKKRLGNAKERI 533
L + ER+
Sbjct: 651 SDDGLDQSFERL 662
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 113/245 (46%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA + M P V +T + + K + V +M G P V T I
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++ +++ A V K+ C PD + +++LI L G++ +A +F+ +G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+V+TY T+++ C A++LL+ M + C+P+ Y ++ C+ +++
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + M +S D TY SL+ L + + + EM++ I+P + + + L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370
Query: 522 EKKRL 526
K+ +
Sbjct: 371 CKEGM 375
>gi|449436637|ref|XP_004136099.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
gi|449509164|ref|XP_004163514.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Cucumis sativus]
Length = 547
Score = 154 bits (388), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 197/409 (48%), Gaps = 11/409 (2%)
Query: 113 KVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLG 172
+ V AL V LV + +D + F W + + G + E+ N M+ VLG
Sbjct: 101 EAVAALDEFDVKADLDLVYSAIWVLRDDWKSSLLAFKWGE-KVGAIDE-EICNLMIWVLG 158
Query: 173 KSKKFCLMWELVKEM-DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
KKF W L++E+ L N S+ M ++ R A++ F M+K+ + D
Sbjct: 159 NHKKFSTAWSLIRELHGSLLN---SMQAMLVMIDRYAYANEASKAIKTFHMMEKFRLTPD 215
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCK-TRKVDDAQKAMK 290
A VL+++L K ++E A + K PL ++ FNI+++GWC T V +A++ +
Sbjct: 216 QEAFHVLLNSLCKYGNIEEAEEFMFVNKKLFPLGTESFNIILNGWCNVTVDVFEAKRIWR 275
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
EM + PD SYT I + + + +M+++ PSV Y + + L +
Sbjct: 276 EMSKCCILPDSTSYTHMISCFSKNGNLFDSLRFYDQMKKRDWIPSVEVYNSLAYVLTREN 335
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
NEALK+ EK+K PD++ Y+SLI L +AG++ +A ++ M + + P + TY+
Sbjct: 336 CFNEALKILEKIKEVGLRPDSTTYNSLISPLCEAGKLDEAKDVLTMMTEDNISPTIETYH 395
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+ I +A + + + +LL++M +D P T+ + + + + M +
Sbjct: 396 SFIQAA----DSKMSFELLKRMRQDGLGPTEGTFLIMFNKSFELEEPEYALNVWVEMKRY 451
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+V Y+ L++GL G L+ A ++EMI G + + +L+E
Sbjct: 452 EVFPSCEHYSVLIQGLATCGHLKKARELYDEMILHGFIAHPKIKTLLKE 500
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 112/441 (25%), Positives = 212/441 (48%), Gaps = 14/441 (3%)
Query: 84 ISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKG--CGVSVSNSLVEQTLRRF---S 138
+ SR LS+ I +++ + S +VVEAL CG +N+LV L R +
Sbjct: 6 VRSRRLSDAQAL----ILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQA 61
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSL 197
L F +++ GY+ + N+++ L K L WE+ +E+ + +G +++
Sbjct: 62 RKLREGTEAFRILRSK-GYLVSINACNSLLGGLVKIDWVELAWEVHREV--VRSGIELNV 118
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T++ ++ L + G++DD M+ G+ D + L+ + +E A+++
Sbjct: 119 YTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNS 178
Query: 258 FKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
D + S +N +I+G CK + A+ + EM G SPD +Y + CR +
Sbjct: 179 MADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDN 238
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
F + + EM +G P +++++ ++ + + +++AL + MK +PD Y+
Sbjct: 239 FSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTV 298
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ + G + +A +I ++M +QG V +V+ YNT+++ C +A KL +M E
Sbjct: 299 LMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERG 358
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD T+ L+ C+ M L M + ++ D Y +L+ G + G++E A
Sbjct: 359 ALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKAS 418
Query: 497 SFFEEMISKGIVPYHSTYKML 517
++ MIS+ I P H TY +L
Sbjct: 419 ELWDGMISRKIFPNHITYGIL 439
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/357 (26%), Positives = 169/357 (47%), Gaps = 6/357 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN +++ L K ++ ++ EM LN G T +T++ R + +A E F
Sbjct: 191 YNAIINGLCKKGRYARAKGILIEM--LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGE 248
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTR 280
M + GV D + S L+ + ++ A F + K +P + I+ +L+HG+C+
Sbjct: 249 MLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVP-DNVIYTVLMHGYCRNG 307
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ +A K EM +QG DV++Y + C+EK D EM E+G P T+T
Sbjct: 308 NMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFT 367
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++H + + +AL ++ M + PD Y++LI K G ++ A+E+++ M +
Sbjct: 368 TLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISR 427
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ PN +TY +I++ C+ A +L M E KP T ++K CR
Sbjct: 428 KIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKA 487
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ L M V+ D +Y +L+ G + ++ A + +M +G++P TY ++
Sbjct: 488 DEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVV 544
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/357 (26%), Positives = 166/357 (46%), Gaps = 6/357 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++ + F E+ EM L G V L + S+++ R D A+ FR
Sbjct: 226 YNTLLVESCRRDNFSEAKEIFGEM--LRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRD 283
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
MKK+G+ D +VLM + ++ A K+ E + C+ L +N +++G CK +
Sbjct: 284 MKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCV-LDVIAYNTILNGLCKEK 342
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ DA K EM ++G PD ++T I +C++ + K M ++ KP ++ Y
Sbjct: 343 MLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYN 402
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K ++ +A ++++ M S P+ Y LI G V +A +++ M ++
Sbjct: 403 TLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEK 462
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P ++T NT+I C + A + L +M PD +Y L+ R+ M
Sbjct: 463 GIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKA 522
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ M K + D TY ++ G G+++ A +MI KGI P STY L
Sbjct: 523 FLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTAL 579
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 128/279 (45%), Gaps = 4/279 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ L K K +L EM E T +T++ + G A+ F M
Sbjct: 331 YNTILNGLCKEKMLTDADKLFDEMVE-RGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 389
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ ++ D A + L+D K +E A +++ + + P + + ILI+ +C
Sbjct: 390 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFP-NHITYGILINAYCSVGH 448
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V +A + M ++G P +V+ I+ YCR D K D+ L M KG P I+Y
Sbjct: 449 VSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNT 508
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ + +++A KM+ + LPD Y+ ++ + GR+++A + M ++G
Sbjct: 509 LINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKG 568
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ P+ TY +I+ + A + +M + PD
Sbjct: 569 INPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 111/257 (43%)
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N L+ G K V+ A + +E+ + G +V + + C++ F V L EM+
Sbjct: 87 NSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEG 146
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
G ++TY ++ A + + EA ++ M P Y+++I L K GR
Sbjct: 147 NGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR 206
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A I +M G+ P+ TYNT++ +C R A ++ +M PD +++ L+
Sbjct: 207 AKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIA 266
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ R + + M K + D Y L+ G +G + A +EM+ +G V
Sbjct: 267 VFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVL 326
Query: 510 YHSTYKMLEEKLEKKRL 526
Y + L K+++
Sbjct: 327 DVIAYNTILNGLCKEKM 343
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 107/243 (44%), Gaps = 19/243 (7%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
++T A F TQ YNT++D FC + E+ K EL +G +S
Sbjct: 378 NMTKALSLFG-TMTQRNIKPDIVAYNTLID------GFCKVGEMEKA-SELWDGMISRKI 429
Query: 200 MSTIMRRLVRGGRY---DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG------NSVEH 250
+ + Y EAFR + +EK + V +T++KG +S
Sbjct: 430 FPNHITYGILINAYCSVGHVSEAFR-LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKAD 488
Query: 251 AYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+ + K P +N LI+G+ + +D A + +M ++G PD+++Y +
Sbjct: 489 EFLGRMIAKGVAP-DHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNG 547
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
+CR+ ++ + L++M EKG P TYT +++ +NEA + +++M PD
Sbjct: 548 FCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPD 607
Query: 371 TSF 373
F
Sbjct: 608 DVF 610
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 181/371 (48%), Gaps = 2/371 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G P Y +++ +L + +V++M ++ + A +T+M R G
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDM-VMHGVVLDAAVFTTVMSGFCRKGDLAA 373
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIH 274
A F M+K G+ D + L++ L + ++ A +V E +D + + + + +LI
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLID 433
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+CK K+ +A +M Q+ +P+VV+YT + C++ D ++ L EM KG +
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
++ TY +++ L KA + +A++ M PD Y+++I L ++ + A+ +
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M +G+ P ++TYN +++ C E +LL+ M E P+ TY L+K C +
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
K MK + M +V + TY L++G ++ ++ A F EMI KG S+Y
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 515 KMLEEKLEKKR 525
L L KK+
Sbjct: 674 NALIRLLNKKK 684
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 155/327 (47%), Gaps = 14/327 (4%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
+GY +L+ + T A++ M G+E + A + ++ L V A
Sbjct: 293 HGYCTLSELET-------------AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDA 339
Query: 252 YKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+V + + L + +F ++ G+C+ + A+ EM ++G + D V+YT I
Sbjct: 340 VRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALING 399
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
CR + ++ + L+EM++KG +TYT+++ K ++ EA V+ KM P+
Sbjct: 400 LCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPN 459
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y++L L K G V ANE+ +M +G+ N+ TYN++I+ C E A++ +
Sbjct: 460 VVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMI 519
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
M+E KPD TY ++ C+ K + + LL M + TY L+ G SG
Sbjct: 520 DMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579
Query: 491 KLELACSFFEEMISKGIVPYHSTYKML 517
++E E M+ K I P +TY L
Sbjct: 580 RVEGGKRLLEWMLEKNIHPNTTTYNSL 606
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 178/399 (44%), Gaps = 5/399 (1%)
Query: 113 KVVEALKGCGVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
+VVE + GV + ++ + F DL A +F + + G Y +++
Sbjct: 341 RVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR-GLAADGVTYTALING 399
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
L ++ + +++EM++ V T + ++ + G+ +A M + V
Sbjct: 400 LCRAGELKEAERVLQEMED-KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTP 458
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ + L D L K V A ++ E + L+ +N LI+G CK ++ A + M
Sbjct: 459 NVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTM 518
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
+M + G PDV +YT I C+ K+ + L+EM +KG KP+++TY ++M+ +
Sbjct: 519 IDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 578
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
++ ++ E M + P+T+ Y+SL+ +K EI++ M Q VVPN TY
Sbjct: 579 GRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTY 638
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N +I C + AL +M E + +Y L+++ +KK+ L M K
Sbjct: 639 NILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
++ + Y + LE + +E++ +V
Sbjct: 699 ERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLV 737
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 181/371 (48%), Gaps = 2/371 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G P Y +++ +L + +V++M ++ + A +T+M R G
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDM-VMHGVVLDAAVFTTVMSGFCRKGDLAA 373
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIH 274
A F M+K G+ D + L++ L + ++ A +V E +D + + + + +LI
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLID 433
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+CK K+ +A +M Q+ +P+VV+YT + C++ D ++ L EM KG +
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
++ TY +++ L KA + +A++ M PD Y+++I L ++ + A+ +
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M +G+ P ++TYN +++ C E +LL+ M E P+ TY L+K C +
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
K MK + M +V + TY L++G ++ ++ A F EMI KG S+Y
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 515 KMLEEKLEKKR 525
L L KK+
Sbjct: 674 NALIRLLNKKK 684
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 155/327 (47%), Gaps = 14/327 (4%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
+GY +L+ + T A++ M G+E + A + ++ L V A
Sbjct: 293 HGYCTLSELET-------------AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDA 339
Query: 252 YKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+V + + L + +F ++ G+C+ + A+ EM ++G + D V+YT I
Sbjct: 340 VRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALING 399
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
CR + ++ + L+EM++KG +TYT+++ K ++ EA V+ KM P+
Sbjct: 400 LCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPN 459
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y++L L K G V ANE+ +M +G+ N+ TYN++I+ C E A++ +
Sbjct: 460 VVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMI 519
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
M+E KPD TY ++ C+ K + + LL M + TY L+ G SG
Sbjct: 520 DMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579
Query: 491 KLELACSFFEEMISKGIVPYHSTYKML 517
++E E M+ K I P +TY L
Sbjct: 580 RVEGGKRLLEWMLEKNIHPNTTTYNSL 606
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 179/399 (44%), Gaps = 5/399 (1%)
Query: 113 KVVEALKGCGVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
+VVE + GV + ++ + F DL A +F + + G Y +++
Sbjct: 341 RVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR-GLAADGVTYTALING 399
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
L ++ + +++EM++ V T + ++ + G+ +A M + V
Sbjct: 400 LCRAGELKEAERVLQEMED-KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTP 458
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ + L D L K V A ++ E + L+ +N LI+G CK ++ A + M
Sbjct: 459 NVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTM 518
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
+M + G PDV +YT I C+ K+ + L+EM +KG KP+++TY ++M+ +
Sbjct: 519 IDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 578
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
++ ++ E M + P+T+ Y+SL+ +K EI++ M Q VVPN TY
Sbjct: 579 GRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTY 638
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N +I C + AL +M E + +Y L+++ +KK+ L M K
Sbjct: 639 NILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ ++ + Y + LE + +E++ +V
Sbjct: 699 DRLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLV 737
>gi|357465315|ref|XP_003602939.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491987|gb|AES73190.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 586
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 212/427 (49%), Gaps = 15/427 (3%)
Query: 111 PDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
P+ VV + +++ + ++R D A F Q G+ H Y T++
Sbjct: 117 PEIVVAETRKKSKYITHDVAINLIKR-EKDPQHALKIFNMVSEQKGFNHNNATYATILQK 175
Query: 171 LGKSKKFC----LMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
L + KKF ++ ++ E + + G +M+ + G ++ +AF ++
Sbjct: 176 LAQFKKFQAVDRVLHQMTYEACKFHEG-----VFINLMKHYSKCGFHEKVFDAFLSIQTI 230
Query: 227 GVEKDT-RALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ--IFNILIHGWCKTRKVD 283
EK + +A+S ++ LV N V+ K+ L K + IFNIL+ C+ +D
Sbjct: 231 VREKPSPKAISSCLNLLVDSNQVDLVRKLLLYAKRSLVYKPNVCIFNILVKYHCRRGDID 290
Query: 284 DAQKAMKEMFQQGFS-PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-CKPSVITYTI 341
A + +KEM +S P+V++Y+ ++ CR ++ + +EM K P +TY +
Sbjct: 291 SAFEVVKEMRNSKYSYPNVITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNV 350
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ + + + A V E MK++ C P+ YS+L+ L KAG+++DA + +MK G
Sbjct: 351 LINGFCREGKADRARNVIEFMKNNGCCPNVFNYSALVDGLCKAGKLQDAKGVLAEMKSSG 410
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+ +TY ++I+ + + A++LL +M+E+ C+ D T+ +L CR+ R
Sbjct: 411 LKPDAITYTSLINFFSRNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEAL 470
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
++ + + V ++ G+Y ++ L ++ +L A M+S+G VP+++T L +L
Sbjct: 471 DMIEKLPQQGVYLNKGSYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLVRL 530
Query: 522 EKKRLGN 528
K+ + N
Sbjct: 531 CKEGMAN 537
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 148/325 (45%), Gaps = 8/325 (2%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
SN + +AK Y ++N +V + +E+VKEM Y ++
Sbjct: 250 SNQVDLVRKLLLYAKRSLVYKPNVCIFNILVKYHCRRGDIDSAFEVVKEMRNSKYSYPNV 309
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKV-- 254
T ST+M L R GR +A E F M K + D +VL++ + + A V
Sbjct: 310 ITYSTLMDGLCRNGRLKEAFELFEEMVSKDQIVPDPLTYNVLINGFCREGKADRARNVIE 369
Query: 255 FLEFKDCIPLSSQIFN--ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
F++ C P +FN L+ G CK K+ DA+ + EM G PD ++YT I +
Sbjct: 370 FMKNNGCCP---NVFNYSALVDGLCKAGKLQDAKGVLAEMKSSGLKPDAITYTSLINFFS 426
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
R + + L EM+E C+ +T+ +++ L + + +EAL + EK+ +
Sbjct: 427 RNGQIDEAIELLTEMKENDCQADTVTFNVILGGLCREGRFDEALDMIEKLPQQGVYLNKG 486
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y ++ L++ ++ AN++ M +G VP+ T N ++ C +A L +
Sbjct: 487 SYRIVLNSLTQNCELRKANKLLGLMLSRGFVPHYATSNELLVRLCKEGMANDAATALFDL 546
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRM 457
+ +P +++ L+ + CR +++
Sbjct: 547 VDMGFQPQHDSWELLIDLICRDRKL 571
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 177/352 (50%), Gaps = 10/352 (2%)
Query: 171 LGKSKKFCLMWELVKEMDEL---NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG 227
+ K K++ + L +MD +N Y T++ ++ L R AV M K G
Sbjct: 96 IAKKKQYSTVVSLCNQMDLFGVAHNDY----TLNILINSLCRLSHIHFAVSVLSKMFKLG 151
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDA 285
++ D+ + L++ L ++ A ++F E +D +P ++ F IL+ CK V +A
Sbjct: 152 IQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMP-NTVTFTILVDVLCKKGMVSEA 210
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ + M ++G P++ +Y + YC + + M KGC PSV +Y+I+++
Sbjct: 211 RCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILING 270
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K+++I+EA + +M + +P+T Y++L+ L A + +A E+F+ M G++PN
Sbjct: 271 YCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPN 330
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
+ TY+ ++ C E ALKLL M+E +PD Y L++ +++V L +
Sbjct: 331 LRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFS 390
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+F N + TY +++GL++ G + A F +M G +P +Y ++
Sbjct: 391 KLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVI 442
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 164/334 (49%), Gaps = 1/334 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S + + + + +Y V M +GV + L++L+++L + + + A V
Sbjct: 85 SFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSVL 144
Query: 256 LE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ FK I S F LI+G C ++ +A + EM + P+ V++T ++ C++
Sbjct: 145 SKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKK 204
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + M EKG +P++ TY +M+ ++N+A KV+E M C P Y
Sbjct: 205 GMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSY 264
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S LI K+ R+ +A + M ++ ++PN +TYNT++ C S A +L +KM
Sbjct: 265 SILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCS 324
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
P+ TY+ LL C+ ++ LLT M + + D Y L++G+ +GKLE+
Sbjct: 325 SGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEV 384
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGN 528
A F ++ + GI P TY ++ + L K+ L +
Sbjct: 385 AKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSD 418
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 155/322 (48%), Gaps = 4/322 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+ T+++ L + EL EM + + T + ++ L + G +A F M
Sbjct: 159 FTTLINGLCNEGRIKEAVELFNEMAG-RDAMPNTVTFTILVDVLCKKGMVSEARCVFETM 217
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ GVE + + LM+ + A KVF + K C P S ++ILI+G+CK+R+
Sbjct: 218 TEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAP-SVHSYSILINGYCKSRR 276
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A+ + +M ++ P+ V+Y ++ C + + K+M G P++ TY+I
Sbjct: 277 IDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSI 336
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K + EALK+ M+ PD Y+ LI + AG+++ A E+F + G
Sbjct: 337 LLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANG 396
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+V TYN MI + A KL +KME+D PD +Y +++ + +
Sbjct: 397 IRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAI 456
Query: 462 FLLTHMFKNDVSMDAGTYASLV 483
L+ M S D+ T+ L+
Sbjct: 457 QLIDEMVGRRFSADSSTFKMLL 478
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 135/298 (45%), Gaps = 38/298 (12%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA + M P V F+ ++K + V +M G + T I
Sbjct: 67 IDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNI 126
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE--------- 392
++++L + I+ A+ V KM PD+ +++LI L GR+K+A E
Sbjct: 127 LINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRD 186
Query: 393 --------------------------IFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+FE M ++GV PN+ TYN +++ C R E +A
Sbjct: 187 AMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDAS 246
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
K+ + M C P +Y+ L+ C+ +R+ LLT M + ++ + TY +L++GL
Sbjct: 247 KVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGL 306
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
+ L A F++M S G++P TY +L + L K G+ +E + KLL +E+K
Sbjct: 307 CHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKH--GHLEEAL-KLLTSMQERK 361
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 136/293 (46%), Gaps = 12/293 (4%)
Query: 164 YNTMVDVLGK----SKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
+ +VDVL K S+ C+ +E + E N Y A M+ RL +DA +
Sbjct: 194 FTILVDVLCKKGMVSEARCV-FETMTEKGVEPNIYTYNALMNGYCLRL----EMNDASKV 248
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWC 277
F M G + S+L++ K ++ A + + K+ IP ++ +N L+ G C
Sbjct: 249 FEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIP-NTVTYNTLMQGLC 307
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ +AQ+ K+M G P++ +Y+ ++ C+ + L MQE+ +P ++
Sbjct: 308 HASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIV 367
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y I++ + A ++ A +++ K+ ++ P Y+ +I L K G +A ++F M
Sbjct: 368 LYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKM 427
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ G +P+ +YN +I + A++L+ +M D T+ LL +
Sbjct: 428 EDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDL 480
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 102/370 (27%), Positives = 177/370 (47%), Gaps = 39/370 (10%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDC 261
++R V+ + + EAFR +K G+ A + L+ LVK V+ A++++ E +
Sbjct: 33 LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSG 92
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ ++ NI+I+ CK +K+++ + + +M ++G PDVV+Y I YCR+ +
Sbjct: 93 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 152
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQ-------INEALKV---------------- 358
+ + M KG KP V TY +++ L K + ++E LK+
Sbjct: 153 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC 212
Query: 359 ------------YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
+++M S +PD +S+LI +LSK G + A + F DMK G+ P+
Sbjct: 213 CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 272
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+ Y +I C ALK+ +M E C D TY +L C++K + + L T
Sbjct: 273 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTE 332
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
M + V D T+ +L+ G + G + A + FE MI + + P TY L + K
Sbjct: 333 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK--- 389
Query: 527 GNAKERINKL 536
G+ E++N+L
Sbjct: 390 GSEMEKVNEL 399
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 169/355 (47%), Gaps = 2/355 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ L K+ K+ ++ EM ++ AT + ++ R DA F M
Sbjct: 170 YNAIINGLCKTGKYLRAKGVLDEMLKIGMS-PDTATYNILLVECCRNDNMMDAERIFDEM 228
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKV 282
GV D + S L+ L K ++ A K F + K+ + + I+ ILI G+C+ +
Sbjct: 229 PSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVM 288
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A K EM +QG DVV+Y + C+EK + D+ EM E+G P T+T +
Sbjct: 289 SEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTL 348
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K +N+A+ ++E M + PD Y++LI K ++ NE++ DM + +
Sbjct: 349 INGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRI 408
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN ++Y +I+ C A +L +M E + T ++K CR +
Sbjct: 409 YPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADE 468
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L++M + D TY +L+ G I+ ++ A + +M + G++P TY ++
Sbjct: 469 FLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVI 523
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 167/360 (46%), Gaps = 38/360 (10%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
VS+ ++++ LV+ G D A E ++ + + GV+ + L+++++ L K +E+ K
Sbjct: 60 VSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENT-KS 118
Query: 255 FLE-------FKDCIPLSSQI------------------------------FNILIHGWC 277
FL F D + ++ I +N +I+G C
Sbjct: 119 FLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLC 178
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
KT K A+ + EM + G SPD +Y + CR + + EM +G P ++
Sbjct: 179 KTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLV 238
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
+++ ++ L K +++ALK + MK+ PD Y+ LI + G + +A ++ ++M
Sbjct: 239 SFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEM 298
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+QG V +V+TYNT+++ C A +L +M E PD T+ L+ + M
Sbjct: 299 LEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNM 358
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M + ++ D TY +L+ G + ++E + +MIS+ I P H +Y +L
Sbjct: 359 NKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGIL 418
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 155/350 (44%), Gaps = 38/350 (10%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L + S ++ L + G D A++ FR MK G+ D ++L+ + + A KV
Sbjct: 237 LVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRD 296
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E + C+ L +N +++G CK + + +A + EM ++G PD ++T I Y ++
Sbjct: 297 EMLEQGCV-LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKD 355
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ K + M ++ KP V+TY ++ K ++ + +++ M S P+ Y
Sbjct: 356 GNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISY 415
Query: 375 SSLI------------FIL-----------------------SKAGRVKDANEIFEDMKK 399
LI F L +AG A+E +M
Sbjct: 416 GILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLL 475
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+VP+ +TYNT+I+ + A L+ KME PD TY +L R+ RM+
Sbjct: 476 KGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQE 535
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
++ M + V+ D TY SL+ G + L+ A +EM+ +G VP
Sbjct: 536 AELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 137/278 (49%), Gaps = 2/278 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ L K K EL EM E + T +T++ + G + AV F M
Sbjct: 310 YNTILNGLCKEKMLSEADELFTEMTE-RGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMM 368
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
+ ++ D + L+D KG+ +E +++ + + I + ILI+G+C V
Sbjct: 369 IQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCV 428
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A + EM ++GF +++ ++ YCR + K D+ L M KG P ITY +
Sbjct: 429 SEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTL 488
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K + ++ A + KM++ LPD Y+ ++ S+ GR+++A I M ++GV
Sbjct: 489 INGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGV 548
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
P+ TY ++I+ ++ + A ++ +M + PD
Sbjct: 549 NPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 92/186 (49%)
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C + + + +++ +A+++ E + + +KS + +SL+ L K G V A
Sbjct: 23 CGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAW 82
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
EI++++ + GV NV T N MI++ C + EN L MEE PD TY L+
Sbjct: 83 EIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAY 142
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
CR+ ++ L+ M + TY +++ GL ++GK A +EM+ G+ P
Sbjct: 143 CRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDT 202
Query: 512 STYKML 517
+TY +L
Sbjct: 203 ATYNIL 208
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 107/229 (46%), Gaps = 2/229 (0%)
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G +P V + + Y + + R+ + + ++ KG S+ ++ L K ++ A
Sbjct: 24 GSNPLV--FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLA 81
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
++Y+++ + + +I L K ++++ DM+++GV P+V+TYNT+I++
Sbjct: 82 WEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINA 141
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C + E A +L+ M KP TY ++ C+ + +L M K +S D
Sbjct: 142 YCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPD 201
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
TY L+ + + A F+EM S+G+VP ++ L L K
Sbjct: 202 TATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 250
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 100/228 (43%), Gaps = 36/228 (15%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDE------------LNNGYVSLATMSTIMRRLVRGG 211
YNT++D K + + EL +M L NGY ++ +S
Sbjct: 380 YNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS---------- 429
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG-----NSVE-HAYKVFLEFKDCIPLS 265
EAFR + VEK A + +T+VKG N+V+ + + K +P
Sbjct: 430 ------EAFRLWDEM-VEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVP-D 481
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+N LI+G+ K +D A + +M G PDV++Y + + R+ ++ + +
Sbjct: 482 GITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIML 541
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+M E+G P TYT +++ + EA +V+++M +PD F
Sbjct: 542 KMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPDDKF 589
>gi|242078797|ref|XP_002444167.1| hypothetical protein SORBIDRAFT_07g011860 [Sorghum bicolor]
gi|241940517|gb|EES13662.1| hypothetical protein SORBIDRAFT_07g011860 [Sorghum bicolor]
Length = 520
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 173/356 (48%), Gaps = 9/356 (2%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G + ++ V GK+++F L W +V+ M N G ++ M +M R +
Sbjct: 130 AGLPPPADAWHLAVWAAGKARRFDLAWAVVRRMR--NRGVLTGRAMVILMERYAAANEVN 187
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
AV+ F M+K+ VE D L+ L K ++E A ++ L K PLS++ FNI++
Sbjct: 188 KAVKTFDVMEKFKVESDQSVFYSLLRALCKSKNIEDAEELLLLRKKFFPLSAEGFNIILD 247
Query: 275 GWCKT-RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
GWC + +A++ +EM +PD +SYT I + + EM+++G
Sbjct: 248 GWCNVITDLAEAKRVWREMSNHCITPDGMSYTLMISCFSKVGSLFDTLRVYDEMKKRGWI 307
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P + Y +++ L + + +A ++ K+ + PD Y+S+I L ++ ++ +A +
Sbjct: 308 PGIGVYNSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNSMIVPLCESCKLDEARVV 367
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL-KMCC 452
E M +G+VP + TY+ + + +LKLLQKM+ED C P +T+ L K
Sbjct: 368 MESMILKGIVPTISTYHAFLKQEGI----DESLKLLQKMKEDGCGPKSDTFLMLFDKFFL 423
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ L + M K +S Y ++V GL++ G + A +++EM KG
Sbjct: 424 LNESGNALR-VWNEMRKYKISPVRSHYMTVVEGLVKHGCIPRALEYYDEMKEKGFA 478
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 79/202 (39%), Gaps = 46/202 (22%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIF 269
G D + + MKK G + L+ L + N V+ A+ +F + D + + +
Sbjct: 289 GSLFDTLRVYDEMKKRGWIPGIGVYNSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETY 348
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---E 326
N +I C++ K+D+A+ M+ M +G P + +Y F++ +D++LK +
Sbjct: 349 NSMIVPLCESCKLDEARVVMESMILKGIVPTISTYHAFLKQ-------EGIDESLKLLQK 401
Query: 327 MQEKGCKPSVIT-----------------------------------YTIVMHALGKAKQ 351
M+E GC P T Y V+ L K
Sbjct: 402 MKEDGCGPKSDTFLMLFDKFFLLNESGNALRVWNEMRKYKISPVRSHYMTVVEGLVKHGC 461
Query: 352 INEALKVYEKMKSDDCLPDTSF 373
I AL+ Y++MK DT
Sbjct: 462 IPRALEYYDEMKEKGFASDTQL 483
>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 906
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 119/505 (23%), Positives = 215/505 (42%), Gaps = 96/505 (19%)
Query: 99 KISKILSKQYQSPDKVVEALKG-----CGVSVSNSL----VEQTLRRFSN---------- 139
K+S ++ Y+ + VE ++ CGV + N L VE+ L F
Sbjct: 48 KVSPFMNDNYEKNEAKVEGMRKTVYDLCGV-LENGLWGPDVEEALNVFDEMSQPEVIVGV 106
Query: 140 -----DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD------ 188
D+ AF +F W + +T H PE+YN + V+ +++ + ++++EM
Sbjct: 107 MKRLKDVNVAFQYFRWVERKTQQAHCPEVYNAFLMVMARTRNLDYLEQILEEMSVAGFGL 166
Query: 189 ------ELNNGYV----------------------SLATMSTIMRRLVRGGRYDDAVEAF 220
EL +V + + +T++ L R D + F
Sbjct: 167 SNHVSVELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLF 226
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKT 279
M++ G E + + L+ + ++ A + E K + ++N+ I + K
Sbjct: 227 HQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKV 286
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD-------FRKVD----------- 321
KVD A K EM QG PD V+YT I C+ + F ++D
Sbjct: 287 GKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAY 346
Query: 322 -----------------DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
L+ + KGC PSVI Y ++ LG+ ++ EAL+++++M+
Sbjct: 347 NTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ 406
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
D P+ + Y+ LI +L KAG ++ A ++ + MK+ G+ PN++T N MI C + +
Sbjct: 407 -DAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDE 465
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A + ++ +C PD T+ L+ R+ R+ L M +D + Y SL++
Sbjct: 466 ACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQ 525
Query: 485 GLIESGKLELACSFFEEMISKGIVP 509
+ G+ E ++EM+ +G P
Sbjct: 526 NFFKCGRKEDGHKIYKEMVHRGCSP 550
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 177/363 (48%), Gaps = 10/363 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM---DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
+ +++D LG+ + + L ++M D++ N + +++++ + GR +D + +
Sbjct: 485 FCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPN----VVVYTSLIQNFFKCGRKEDGHKIY 540
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCK 278
+ M G D L+ MD + K VE +F E K +P + ++ILIHG K
Sbjct: 541 KEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVP-DVRSYSILIHGLVK 599
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ K EM +QG DV++Y I+ +C+ K L+EM+ KG +P+V+T
Sbjct: 600 AGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVT 659
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y V+ L K +++EA ++E+ KS + YSSLI K GR+ +A I E++
Sbjct: 660 YGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELM 719
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++G+ PN T+N ++ + E + A Q M+ C P+ TY+ ++ C ++
Sbjct: 720 QKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFN 779
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
M K + + TY +++ GL ++G + A F+ + G VP + Y +
Sbjct: 780 KAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMI 839
Query: 519 EKL 521
E L
Sbjct: 840 EGL 842
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 189/366 (51%), Gaps = 13/366 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDEL-NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ LG+ K + E ++ DE+ + +L T + ++ L + G + A++
Sbjct: 381 YNCILTCLGRKGK---VEEALRIHDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDT 437
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL--EFKDCIPLSSQIFNILIHGWCKTR 280
MK+ G+ + +++++D L K ++ A +FL + K C P S+ F LI G +
Sbjct: 438 MKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSP-DSRTFCSLIDGLGRRG 496
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY--C-REKDFRKVDDTLKEMQEKGCKPSVI 337
+VDDA ++M P+VV YT I+++ C R++D K+ KEM +GC P ++
Sbjct: 497 RVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKI---YKEMVHRGCSPDLM 553
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
M + KA ++ + ++E++K+ +PD YS LI L KAG ++ ++F +M
Sbjct: 554 LLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEM 613
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
K+QG+ +VL YNT+I C + + A +LL++M+ +P TY ++ + R+
Sbjct: 614 KEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRL 673
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L V ++ Y+SL+ G + G+++ A EE++ KG+ P T+ L
Sbjct: 674 DEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCL 733
Query: 518 EEKLEK 523
+ L K
Sbjct: 734 LDALVK 739
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 179/380 (47%), Gaps = 2/380 (0%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
A+ FF K Q G + Y T++ VL K+++ EL +E+D LN + +T+
Sbjct: 292 AWKFFHEMKAQ-GLVPDDVTYTTLIGVLCKARRLDEAVELFEELD-LNRSVPCVYAYNTM 349
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
+ G++D+A K+ G A + ++ L + VE A ++ E +
Sbjct: 350 IMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAA 409
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ +NILI CK +++ A K M + G P++++ I+ C+ + +
Sbjct: 410 PNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSI 469
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+ K C P T+ ++ LG+ ++++A +YEKM D +P+ Y+SLI K
Sbjct: 470 FLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFK 529
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
GR +D ++I+++M +G P+++ N+ + E E L ++++ PD +
Sbjct: 530 CGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRS 589
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y+ L+ + + L M + + +D Y +++ G +SGK++ A EEM
Sbjct: 590 YSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMK 649
Query: 504 SKGIVPYHSTYKMLEEKLEK 523
+KG+ P TY + + L K
Sbjct: 650 TKGLQPTVVTYGSVVDGLAK 669
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 140/269 (52%), Gaps = 2/269 (0%)
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
++L EM E ++ + +T++ + G+ D A + MK G++ ++D
Sbjct: 607 YKLFYEMKE-QGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVD 665
Query: 241 TLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L K + ++ AY +F E K + L+ I++ LI G+ K ++D+A ++E+ Q+G +P
Sbjct: 666 GLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTP 725
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+ ++ C ++ + ++ + + M+ C P+ +TY+I+++ L ++ N+A +
Sbjct: 726 NSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFW 785
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
++M+ P+ Y+++I L+KAG V +A +F+ K G VP+ YN MI +
Sbjct: 786 QEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSA 845
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLL 448
++ +A + ++ C+ + +T LL
Sbjct: 846 NKAMDAYIVFEETRLKGCRVNSKTCVVLL 874
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/270 (23%), Positives = 120/270 (44%), Gaps = 40/270 (14%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
S + A+ KT+ G T Y ++VD L K + + L +E + +++
Sbjct: 635 SGKVDKAYQLLEEMKTK-GLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVD-LNV 692
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
S+++ + GR D+A + + G+ ++ + L+D LVK ++ A F
Sbjct: 693 VIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQN 752
Query: 258 FKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
K+ C P ++ ++I+I+G C RK + A +EM +QG P+ +
Sbjct: 753 MKNLKCSP-NAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNI------------- 798
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
TYT ++ L KA + EA ++++ K+ +PD++ Y+
Sbjct: 799 ----------------------TYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYN 836
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
++I LS A + DA +FE+ + +G N
Sbjct: 837 AMIEGLSSANKAMDAYIVFEETRLKGCRVN 866
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 100/221 (45%), Gaps = 7/221 (3%)
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
FR V+ ++ Q+ C P V Y + + + + ++ ++ E+M
Sbjct: 120 FRWVE---RKTQQAHC-PEV--YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVE 173
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ K+ ++K+A + E M+K P Y T+I + A + + L L +M+E
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+ + + L+++ R+ R+ LL M N + D Y + + GK+++A
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
FF EM ++G+VP TY L L K +RL A E +L
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEEL 334
>gi|297736854|emb|CBI26055.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/361 (27%), Positives = 179/361 (49%), Gaps = 6/361 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST-IMRRLVRGGRYDDAVEAFRG 222
+++++D LGK + + L ++M L+ G+V A + T ++R + GR +D + ++
Sbjct: 232 FSSLIDGLGKCGRVDDAYSLYEKM--LDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKE 289
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTR 280
M G D ++ MD + K E +F E IP ++ ++ILIHG K
Sbjct: 290 MVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIP-DARSYSILIHGLVKAG 348
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ + M +QG D +Y I+ +C+ K L+EM+ KG P+V+TY
Sbjct: 349 LANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYG 408
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
V+ L K +++EA ++E+ KS+ + YSSLI K GR+ +A I E++ ++
Sbjct: 409 SVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQK 468
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ PNV T+N ++ + E AL Q M++ C P+ TY+ L+ CR ++
Sbjct: 469 GLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKA 528
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
M K + + TY +++ GL ++G + A F + G +P ++Y + E
Sbjct: 529 FVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEG 588
Query: 521 L 521
L
Sbjct: 589 L 589
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/393 (25%), Positives = 178/393 (45%), Gaps = 11/393 (2%)
Query: 132 QTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN 191
QT+R+F PAF +T + G M VL K+ + EL +++++ N
Sbjct: 34 QTMRKFK--FRPAFSAYTILIGKVGLMLLFPW------VLCKANRLDEAVELFEQLEQ-N 84
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
+T++ G++D+A K G A + ++ L K VE A
Sbjct: 85 RKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEA 144
Query: 252 YKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
++F E K D +P + +NILI C+ K++ A + +M + G P+V++ I+
Sbjct: 145 LRIFEEMKRDAVP-NVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDR 203
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
C+ + + + M +K C P+ +T++ ++ LGK ++++A +YEKM +P
Sbjct: 204 LCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPG 263
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y+SLI K GR +D ++I+++M G P++ NT + E E L +
Sbjct: 264 AIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFR 323
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
++ PD +Y+ L+ + L M + +D Y +++ G +SG
Sbjct: 324 EINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSG 383
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
K+ A EEM KG P TY + + L K
Sbjct: 384 KVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAK 416
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/364 (24%), Positives = 173/364 (47%), Gaps = 4/364 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++D+L + K E+ +M E + ++ T++ ++ RL + + ++A F GM
Sbjct: 162 YNILIDMLCREGKLNAALEIRDDM-ERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGM 220
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRK 281
+ S L+D L K V+ AY ++ + DC +P + ++ LI + K +
Sbjct: 221 DDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVP-GAIVYTSLIRSFFKCGR 279
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D K KEM G SPD+ +++ + + K +E+ G P +Y+I
Sbjct: 280 KEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSI 339
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H L KA NE +++ MK C+ DT Y+++I K+G+V A ++ E+MK +G
Sbjct: 340 LIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKG 399
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P V+TY ++I + A L ++ + + K + Y+ L+ + R+
Sbjct: 400 HPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAY 459
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
++ + + ++ + T+ L+ L+++ ++ A F+ M P TY +L L
Sbjct: 460 LIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGL 519
Query: 522 EKKR 525
+ R
Sbjct: 520 CRVR 523
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 157/329 (47%), Gaps = 3/329 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L ++T M + + G + FR + +G D R+ S+L+ LVK Y++F
Sbjct: 299 LTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFY 358
Query: 257 EFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
K+ C+ L + +N +I G+CK+ KV+ A + ++EM +G P VV+Y I+ +
Sbjct: 359 AMKEQGCV-LDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKI 417
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ +E + G K +V+ Y+ ++ GK +I+EA + E++ P+ +
Sbjct: 418 DRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTW 477
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ L+ L KA + +A F+ MK PN +TY+ +I+ C + A Q+M++
Sbjct: 478 NCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQK 537
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
KP+ TY ++ + + + L + N D+ +Y +++ GL + K
Sbjct: 538 LGLKPNTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMD 597
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
A + FEE KG + T +L + L K
Sbjct: 598 AYALFEETRLKGCNIHTKTCVVLLDALHK 626
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 124/263 (47%), Gaps = 11/263 (4%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH----------YCRE 314
SS I L+ K+RK+ +A ++ M + F P +YT I C+
Sbjct: 9 SSNISIELVANCVKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKA 68
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + +++++ P Y ++ G A + +EA + E+ K+ +P Y
Sbjct: 69 NRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAY 128
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ ++ L K RV++A IFE+MK+ V PNV TYN +I C + AL++ ME
Sbjct: 129 NCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALEIRDDMER 187
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
P+ T ++ C+ ++++ + M + +A T++SL+ GL + G+++
Sbjct: 188 AGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDD 247
Query: 495 ACSFFEEMISKGIVPYHSTYKML 517
A S +E+M+ G VP Y L
Sbjct: 248 AYSLYEKMLDCGHVPGAIVYTSL 270
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 155/335 (46%), Gaps = 18/335 (5%)
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD----------TLVKGNSVEHAYKVF-- 255
V+ + +A + + M+K+ A ++L+ L K N ++ A ++F
Sbjct: 21 VKSRKLREAFDIIQTMRKFKFRPAFSAYTILIGKVGLMLLFPWVLCKANRLDEAVELFEQ 80
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
LE +P + +N +I G+ K D+A ++ +G P V++Y C + C K
Sbjct: 81 LEQNRKVP-CAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILT--CLGK 137
Query: 316 DFRKVDDTLKEMQE--KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
R+V++ L+ +E + P+V TY I++ L + ++N AL++ + M+ P+
Sbjct: 138 K-RRVEEALRIFEEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLT 196
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+ +I L KA ++++A IFE M + PN +T++++I ++A L +KM
Sbjct: 197 VNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKML 256
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+ P Y L++ + R + + + M S D + + + ++G+ E
Sbjct: 257 DCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETE 316
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGN 528
+ F E+ + G +P +Y +L L K L N
Sbjct: 317 KGRALFREINAHGFIPDARSYSILIHGLVKAGLAN 351
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 111/249 (44%), Gaps = 41/249 (16%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ T Y +++D L K + + L +E N +++ S+++ + GR D+
Sbjct: 399 GHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS-NGIKLNVVVYSSLIDGFGKVGRIDE 457
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQI-FNIL 272
A + + G+ + + L+D LVK + A F KD C P +QI ++IL
Sbjct: 458 AYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPP--NQITYSIL 515
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I+G C+ RK + A +EM + G P+ ++YT I
Sbjct: 516 INGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMIS----------------------- 552
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
L KA I EA ++ + K++ +PD++ Y+++I LS A + DA
Sbjct: 553 ------------GLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYA 600
Query: 393 IFEDMKKQG 401
+FE+ + +G
Sbjct: 601 LFEETRLKG 609
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/417 (26%), Positives = 191/417 (45%), Gaps = 45/417 (10%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
D++ + F WA +Q GY HT ++Y+ ++D LG +K+F ++ +L+ ++ E + +
Sbjct: 81 DVSTSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRE-SL 139
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKK-YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
IM+ R A MK Y E ++ +V++D LV N A VF E
Sbjct: 140 FICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEM 199
Query: 259 -------------------------------------KDCIPLSSQIFNILIHGWCKTRK 281
C+P +S ++ LIH K +
Sbjct: 200 LSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVP-NSVVYQTLIHALSKRDR 258
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V++A K ++EMF G PDV ++ I CR + + M +G P+ ITY +
Sbjct: 259 VNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGV 318
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE-IFEDMKKQ 400
+M+ L + +++EA + K+ + P+ ++ LI K+GR+ +AN +++ M K
Sbjct: 319 LMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTILINGYVKSGRLDEANAFLYDKMIKN 374
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+V T+NT+I C + +A+ ++ M + C P+ TY LL C+K +++
Sbjct: 375 GCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEA 434
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++L M ++ Y L+R L ++GK+ A EM KG P T+ L
Sbjct: 435 GYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTL 491
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/340 (29%), Positives = 161/340 (47%), Gaps = 12/340 (3%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +M L R G+ D EA + K D ++L++ VK ++ A FL
Sbjct: 315 TYGVLMNGLCRVGKVD---EAQVLLNKVPTPNDVH-FTILINGYVKSGRLDEA-NAFLYD 369
Query: 259 K----DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
K C P FN LIHG CK + A + +M G +P++++YT ++ +C++
Sbjct: 370 KMIKNGCRP-DVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKK 428
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ L EM KG + +++ Y +++ AL K ++ +AL + +M C PD +
Sbjct: 429 NQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTF 488
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LIF L K R +DA ++ DM GV+ N +TYNT+I + + ALKL+ M
Sbjct: 489 NTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLF 548
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C D TY L+K C+ + L M + D+ + L+ GL GK+
Sbjct: 549 RGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCN 608
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
A +MI +G+ P TY L L K +GN +E N
Sbjct: 609 ALELLRDMIHRGLAPDVVTYNSLINGLCK--MGNIREAFN 646
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 150/320 (46%), Gaps = 4/320 (1%)
Query: 201 STIMRRLVRGGRYDDA-VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LE 257
+ ++ V+ GR D+A + M K G D + L+ L K + A + +
Sbjct: 348 TILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMS 407
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C P + + L+ G+CK ++++A + EM +GF +++ Y + C+
Sbjct: 408 ANGCTP-NLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
K D L EM +KGCKP + T+ ++ L K + +AL +Y M D + +T Y++L
Sbjct: 467 PKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTL 526
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + G +++A ++ DM +G + +TYN +I + C E AL L +M
Sbjct: 527 IHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDL 586
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P + L+ CR ++ LL M ++ D TY SL+ GL + G + A +
Sbjct: 587 VPSNISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFN 646
Query: 498 FFEEMISKGIVPYHSTYKML 517
F ++ ++GI P TY L
Sbjct: 647 LFNKLQAEGIQPDAITYNTL 666
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 148/337 (43%), Gaps = 4/337 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++ L K ++V +M N +L T +T++ + + ++A M
Sbjct: 383 FNTLIHGLCKKGLMGSAVDMVNDMSA-NGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEM 441
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
G E + +VL+ L K V A + E D C P FN LI G CK +
Sbjct: 442 SAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKP-DIFTFNTLIFGLCKVDR 500
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DA ++M G + V+Y I + R ++ + +M +GC ITY
Sbjct: 501 KEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNG 560
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ A K +AL ++++M D +P + LI L + G+V +A E+ DM +G
Sbjct: 561 LIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRG 620
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+V+TYN++I+ C A L K++ + +PD TY L+ CR
Sbjct: 621 LAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAY 680
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
LL +N + T+ LV I+ E SF
Sbjct: 681 LLLLRGVENAFIPNDVTWYILVSNFIKEIGKENGISF 717
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 140/327 (42%), Gaps = 1/327 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ L + G AV+ M G + + L+D K N +E A V E
Sbjct: 382 TFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEM 441
Query: 259 K-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
L+ +N+L+ CK KV A + EM +G PD+ ++ I C+
Sbjct: 442 SAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRK 501
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
++M G + +TY ++HA + I EALK+ M C D Y+ L
Sbjct: 502 EDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDMLFRGCPLDEITYNGL 561
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I K G + A +F++M ++ +VP+ ++ N +I+ C + NAL+LL+ M
Sbjct: 562 IKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVCNALELLRDMIHRGL 621
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD TY L+ C+ ++ L + + DA TY +L+ +G + A
Sbjct: 622 APDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLICWHCRAGMFDDAYL 681
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ +P T+ +L K+
Sbjct: 682 LLLRGVENAFIPNDVTWYILVSNFIKE 708
>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
Length = 609
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 195/411 (47%), Gaps = 12/411 (2%)
Query: 98 DKISKILSKQYQSPD--KVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
++ +IL PD K +E LK + V + LV + L+ ++ FF WA +
Sbjct: 34 ERFIRILKIFKWGPDAEKALEVLK---LKVDHRLVREVLK-IDVEINVKIQFFKWAGKRR 89
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
+ H Y ++ L F MW++++EM + A +S +++ L + +
Sbjct: 90 NFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMVNK 149
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQIFNIL 272
A+ F +K + + ++ L++ E ++++ E DC P + +++L
Sbjct: 150 ALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFP-DTMTYSVL 208
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+ + K + D A + EM G P YT + Y + D K ++EM++KGC
Sbjct: 209 VSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKGC 267
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P+V TYT ++ LGK+ ++ +A V+ M D C PD ++LI I KAGR++DA +
Sbjct: 268 APTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALK 327
Query: 393 IFEDMKKQGVVPNVLTYNTMISSAC-ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+F+ M+ PNV+TYNT+I + +++ A +KM+ + P TY+ L+
Sbjct: 328 LFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGF 387
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
C+ R++ LL M + Y SL+ L ++ + E A F E+
Sbjct: 388 CKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLEL 438
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/372 (27%), Positives = 178/372 (47%), Gaps = 6/372 (1%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G T ++Y T++ + KS + LV+EM + ++ T + +++ L + GR +
Sbjct: 231 NGLHPTAKIYTTLLAIYFKSGDEKALG-LVQEMKD-KGCAPTVFTYTELIKGLGKSGRVE 288
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNIL 272
DA F M K G + D ++ L++ K +E A K+F + + C P + +N +
Sbjct: 289 DAYSVFLNMLKDGCKPDVVLINNLINIFGKAGRLEDALKLFDQMRSLKCAP-NVVTYNTV 347
Query: 273 IHGWCKTRK-VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
I +++ +A ++M G +P +Y+ I+ +C+ K L+EM EKG
Sbjct: 348 IKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKG 407
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P Y +++ALGKAK+ A +++ ++K + Y+ +I L K GR +A
Sbjct: 408 FPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRPSEAV 467
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++F +MKK G P+V YN ++S E A L+ MEE+ C PD ++ +L
Sbjct: 468 DLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNIILNGL 527
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
R R + + M + + DA +Y +++ L SG E A EM S+G H
Sbjct: 528 ARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDH 587
Query: 512 STYKMLEEKLEK 523
TY + E + K
Sbjct: 588 ITYSSILEAVGK 599
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 116/242 (47%), Gaps = 3/242 (1%)
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-CKPSV 336
K + V+ A ++ + P +Y I +E K+ + EM +G C P
Sbjct: 143 KAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDT 202
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+TY++++ A K + + A++++++MK++ P Y++L+ I K+G K A + ++
Sbjct: 203 MTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEK-ALGLVQE 261
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
MK +G P V TY +I E+A + M +D CKPD L+ + + R
Sbjct: 262 MKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKAGR 321
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES-GKLELACSFFEEMISKGIVPYHSTYK 515
++ L M + + TY ++++ L ES A S+FE+M + G+ P TY
Sbjct: 322 LEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYS 381
Query: 516 ML 517
+L
Sbjct: 382 IL 383
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 125/261 (47%), Gaps = 1/261 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ L +SK E + N S T S ++ + R + A+ M
Sbjct: 344 YNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILIDGFCKTNRVEKALLLLEEM 403
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKV 282
+ G A L++ L K E A ++FLE K +C S++I+ ++I K +
Sbjct: 404 DEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRSSARIYAVMIKNLGKCGRP 463
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A EM + G +PDV +Y + R + L+ M+E GC P + ++ I+
Sbjct: 464 SEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSALRTMEENGCTPDLNSHNII 523
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ L + + +A +++ KMK PD Y++++ LS++G ++A ++ +M +G
Sbjct: 524 LNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGF 583
Query: 403 VPNVLTYNTMISSACARSEEE 423
+ +TY++++ + E++
Sbjct: 584 EYDHITYSSILEAVGKVDEDD 604
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 2/169 (1%)
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ LGKAK +N+AL V+ ++KS C P S Y+S+I +L + G + +E++ +M +G
Sbjct: 137 VVKILGKAKMVNKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEG 196
Query: 402 -VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
P+ +TY+ ++S+ ++ A++L +M+ + P + Y LL + + K L
Sbjct: 197 DCFPDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGDEKAL 256
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
L+ M + TY L++GL +SG++E A S F M+ G P
Sbjct: 257 G-LVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKP 304
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 103/239 (43%), Gaps = 38/239 (15%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ P Y ++++ LGK+K++ EL E+ E N G S + +++ L + GR
Sbjct: 405 EKGFPPCPAAYCSLINALGKAKRYEAANELFLELKE-NCGRSSARIYAVMIKNLGKCGRP 463
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
+AV+ F MKK G D A + LM LV+ +
Sbjct: 464 SEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMI------------------------- 498
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
++A A++ M + G +PD+ S+ + R + + +M++ K
Sbjct: 499 ---------EEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIK 549
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P ++Y ++ +L ++ EA K+ +M S D YSS IL G+V + +E
Sbjct: 550 PDAVSYNTILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSS---ILEAVGKVDEDDE 605
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/363 (25%), Positives = 175/363 (48%), Gaps = 2/363 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ + K+K + L ++MD + T++ ++ L R D A A +
Sbjct: 73 FNRLLTSIAKTKHHSTLLSLSRQMDSFGIP-PDVYTLAIVINSLCHLNRVDFAFSALAKI 131
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
K G + D + L+ L + A +F + + + + LI+G CK
Sbjct: 132 LKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNT 191
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A + ++ M Q P+VV ++ I+ C+++ + + EM KG P+++TY +
Sbjct: 192 SAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 251
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+H L K + + +M +PD ++++ L K G V +A+++ + M +GV
Sbjct: 252 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 311
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PNV+TYN ++ C R+E + A+K+ M C + +Y L+ C+ + + +
Sbjct: 312 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMY 371
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L M + +++ + TY +L+ GL G+L+ A S F EM+++G +P TY+ L + L
Sbjct: 372 LFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC 431
Query: 523 KKR 525
K R
Sbjct: 432 KNR 434
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 176/385 (45%), Gaps = 5/385 (1%)
Query: 145 FGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMST 202
F F AK + G+ + T++ L K L +M + G+ ++ T T
Sbjct: 123 FAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM--IGEGFQPNVVTYGT 180
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDC 261
++ L + G A+ R M++ + + S L+D+L K V A+ +F E
Sbjct: 181 LINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKG 240
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
I + +N LIHG CK + M EM PDV + ++ C+E +
Sbjct: 241 ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAH 300
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D + M +G +P+V+TY +M +++ A+KV++ M DC+ + Y++LI
Sbjct: 301 DVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGY 360
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K V A +FE+M +Q + PN +TYNT+I C ++A+ L +M PD
Sbjct: 361 CKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDL 420
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L C+ + + LL + ++ D Y +++ G+ +G+LE A F
Sbjct: 421 VTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSN 480
Query: 502 MISKGIVPYHSTYKMLEEKLEKKRL 526
+ SKG+ P TY ++ L K+ L
Sbjct: 481 LSSKGLQPNVWTYNIMIHGLCKQGL 505
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/373 (21%), Positives = 163/373 (43%), Gaps = 4/373 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
+++T++D L K ++ + + EM + G ++ T ++++ L + +
Sbjct: 212 VFSTLIDSLCKDRQVTEAFNIFSEM--ITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMN 269
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTR 280
M + D L+ ++D L K V A+ V + + + +N L+ G C
Sbjct: 270 EMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRN 329
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+VD A K M + +V+SY I YC+ + K +EM + P+ +TY
Sbjct: 330 EVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYN 389
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++H L ++ +A+ ++ +M + +PD Y +L L K + A + + ++
Sbjct: 390 TLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGS 449
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
P++ Y T++ C E E+A L + +P+ TY ++ C++ +
Sbjct: 450 NWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEA 509
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+ L + M KN S + TY + RG + + + EEM+++G ST +L
Sbjct: 510 SKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGM 569
Query: 521 LEKKRLGNAKERI 533
L L + ++I
Sbjct: 570 LSDDGLDQSVKQI 582
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 119/258 (46%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A M + P V + + + K + ++M G P V T I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+++L +++ A K+ PD + +++LI L G++ +A +F+ M +G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PNV+TY T+I+ C A++LL+ ME+ C+P+ ++ L+ C+ +++
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ + M +S + TY SL+ GL + + + + EM+ I+P T + + L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Query: 522 EKKRLGNAKERINKLLAH 539
K+ + + ++ H
Sbjct: 291 CKEGMVAEAHDVVDMMIH 308
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/255 (25%), Positives = 109/255 (42%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P S+ FN L+ KT+ ++M G PDV + I C
Sbjct: 67 PPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFS 126
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L ++ + G +P T+T ++ L +I EAL +++KM + P+ Y +LI L
Sbjct: 127 ALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLC 186
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K G A + M++ PNV+ ++T+I S C + A + +M P+
Sbjct: 187 KVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIV 246
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ C+ K + L+ M + + D T ++V L + G + A + M
Sbjct: 247 TYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMM 306
Query: 503 ISKGIVPYHSTYKML 517
I +G+ P TY L
Sbjct: 307 IHRGVEPNVVTYNAL 321
>gi|356557763|ref|XP_003547180.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g14820, mitochondrial-like [Glycine max]
Length = 492
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 180/363 (49%), Gaps = 12/363 (3%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ 154
+V+++ K++ + + + L CGV +S+ LV L+RF + PAF FF WA +
Sbjct: 64 AEVERVCKVIDELFALDRNMEAVLDECGVRLSHDLVVDMLQRFKH-AXPAFRFFCWAGKR 122
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G+ H YN M+ VLG++++F M +++EM E+ G +++ T S ++ +
Sbjct: 123 PGFDHDSRTYNCMMCVLGRTRQFETMVAMLEEMGEM--GLLTMETFSVAIKTFAEANQRK 180
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF----- 269
A F MKKY + ++ L+D+L + A VF E + + + F
Sbjct: 181 KAAGIFDLMKKYEFKVGVDVINFLLDSLSAAKLGKEAQAVF-EKRVWNEMIDRGFKPDIV 239
Query: 270 --NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
N+++ G K +K DA K + M + SP+V SYT I+ +C++K +V + + EM
Sbjct: 240 AHNVMLEGLLKCKK-SDAXKLFEIMKAKCPSPNVRSYTIMIQDFCKQKMMGEVVEYIDEM 298
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++ C+P YT ++ G K+++ + ++M+ C PD Y++LI + +
Sbjct: 299 VDRECQPDAALYTCLITGFGXKKKMDMVYNLLKEMRKRGCSPDGGTYNALIKLXTSQQMP 358
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
DA I++ M + G+ P + TYN ++ S E + M + C PD +Y+
Sbjct: 359 DDAVRIYKKMSQSGIKPTIHTYNMIMRSYFVTKNYEIGHAIWDXMHQKGCCPDDNSYSVY 418
Query: 448 LKM 450
+ M
Sbjct: 419 IGM 421
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/257 (24%), Positives = 118/257 (45%), Gaps = 7/257 (2%)
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
S+ +N ++ +TR+ + ++EM + G + +++ I+ + +K
Sbjct: 129 SRTYNCMMCVLGRTRQFETMVAMLEEMGEMGLLT-METFSVAIKTFAEANQRKKAAGIFD 187
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL-----PDTSFYSSLIFI 380
M++ K V ++ +L AK EA V+EK ++ + PD ++ ++
Sbjct: 188 LMKKYEFKVGVDVINFLLDSLSAAKLGKEAQAVFEKRVWNEMIDRGFKPDIVAHNVMLEG 247
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K + DA ++FE MK + PNV +Y MI C + ++ + +M + C+PD
Sbjct: 248 LLKCKK-SDAXKLFEIMKAKCPSPNVRSYTIMIQDFCKQKMMGEVVEYIDEMVDRECQPD 306
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
Y L+ KK+M ++ LL M K S D GTY +L++ + A ++
Sbjct: 307 AALYTCLITGFGXKKKMDMVYNLLKEMRKRGCSPDGGTYNALIKLXTSQQMPDDAVRIYK 366
Query: 501 EMISKGIVPYHSTYKML 517
+M GI P TY M+
Sbjct: 367 KMSQSGIKPTIHTYNMI 383
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 118/256 (46%), Gaps = 7/256 (2%)
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
GF D +Y C + R + F + L+EM E G ++ T+++ + +A Q +A
Sbjct: 124 GFDHDSRTYNCMMCVLGRTRQFETMVAMLEEMGEMGL-LTMETFSVAIKTFAEANQRKKA 182
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE-----DMKKQGVVPNVLTYN 410
+++ MK + + L+ LS A K+A +FE +M +G P+++ +N
Sbjct: 183 AGIFDLMKKYEFKVGVDVINFLLDSLSAAKLGKEAQAVFEKRVWNEMIDRGFKPDIVAHN 242
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
M+ + ++ +A KL + M+ P+ +Y +++ C++K M + + M
Sbjct: 243 VMLE-GLLKCKKSDAXKLFEIMKAKCPSPNVRSYTIMIQDFCKQKMMGEVVEYIDEMVDR 301
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
+ DA Y L+ G K+++ + +EM +G P TY L + +++ +
Sbjct: 302 ECQPDAALYTCLITGFGXKKKMDMVYNLLKEMRKRGCSPDGGTYNALIKLXTSQQMPDDA 361
Query: 531 ERINKLLAHAKEQKTF 546
RI K ++ + + T
Sbjct: 362 VRIYKKMSQSGIKPTI 377
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 97/371 (26%), Positives = 181/371 (48%), Gaps = 2/371 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G P Y +++ +L + +V++M ++ + A +T+M R G
Sbjct: 315 GLELNPVAYTSVIALLCDEGQVSDAVRVVEDM-VMHGVVLDAAVFTTVMSGFCRKGDLAA 373
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIH 274
A F M+K G+ D + L++ L + ++ A +V E +D + + + + +LI
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLID 433
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+CK K+ +A +M Q+ +P+VV+YT + C++ D ++ L EM KG +
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
++ TY +++ L KA + +A++ M PD Y+++I L ++ + A+ +
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M +G+ P ++TYN +++ C E +LL+ M E P+ TY L+K C +
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
K MK + M +V + TY L++G ++ ++ A F EMI KG S+Y
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 515 KMLEEKLEKKR 525
L L KK+
Sbjct: 674 NALIRLLNKKK 684
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 155/327 (47%), Gaps = 14/327 (4%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
+GY +L+ + T A++ M G+E + A + ++ L V A
Sbjct: 293 HGYCTLSELET-------------AIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDA 339
Query: 252 YKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+V + + L + +F ++ G+C+ + A+ EM ++G + D V+YT I
Sbjct: 340 VRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALING 399
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
CR + ++ + L+EM++KG +TYT+++ K ++ EA V+ KM P+
Sbjct: 400 LCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPN 459
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y++L L K G V ANE+ +M +G+ N+ TYN++I+ C E A++ +
Sbjct: 460 VVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMI 519
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
M+E KPD TY ++ C+ K + + LL M + TY L+ G SG
Sbjct: 520 DMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSG 579
Query: 491 KLELACSFFEEMISKGIVPYHSTYKML 517
++E E M+ K I P +TY L
Sbjct: 580 RVEGGKRLLEWMLEKNIHPNTTTYNSL 606
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 178/399 (44%), Gaps = 5/399 (1%)
Query: 113 KVVEALKGCGVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
+VVE + GV + ++ + F DL A +F + + G Y +++
Sbjct: 341 RVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKR-GLAADGVTYTALING 399
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
L ++ + +++EM++ V T + ++ + G+ +A M + V
Sbjct: 400 LCRAGELKEAERVLQEMED-KGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTP 458
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ + L D L K V A ++ E + L+ +N LI+G CK ++ A + M
Sbjct: 459 NVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTM 518
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
+M + G PDV +YT I C+ K+ + L+EM +KG KP+++TY ++M+ +
Sbjct: 519 IDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMS 578
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
++ ++ E M + P+T+ Y+SL+ +K EI++ M Q VVPN TY
Sbjct: 579 GRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTY 638
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N +I C + AL +M E + +Y L+++ +KK+ L M K
Sbjct: 639 NILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRK 698
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
++ + Y + LE + +E++ +V
Sbjct: 699 ERLTAEPDVYNFYIDLSFNEDNLESTLALCDELVEVTLV 737
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 186/423 (43%), Gaps = 55/423 (13%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
L+P FF+ +Q + +NT+ D L + M + S+
Sbjct: 13 LSPPLPFFS--SSQNNFHSKSLHFNTLDDALSSFNRLLHM-----------HPPPSIVDF 59
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ + + Y + M +GV + L++L+++ N V A+ V +
Sbjct: 60 AKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKI-- 117
Query: 261 CIPLSSQ----IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ L Q F LI G C K+ +A +M +GF P+VV+Y I C+ +
Sbjct: 118 -LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 176
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC--------- 367
L+ M++ C+P V+ YT ++ +L K +Q+ EA ++ +M
Sbjct: 177 TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 236
Query: 368 --------------------------LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
LPD +S+++ L K G+V +A+EI + M ++G
Sbjct: 237 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 296
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V P+V+TY T++ C +SE + A+K+ M PD +Y L+ C+ ++
Sbjct: 297 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAM 356
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+L M + + D TY +L+ GL G+L+ A + F EM+++G +P TY +L + L
Sbjct: 357 YLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 416
Query: 522 EKK 524
K
Sbjct: 417 CKN 419
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/436 (24%), Positives = 195/436 (44%), Gaps = 41/436 (9%)
Query: 144 AFGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMS 201
F F AK + G+ P + T++ L K L +M ++ G+ ++ T
Sbjct: 108 GFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM--IDEGFQPNVVTYG 165
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF------ 255
T++ L + G A+ R M++ + D + ++D+L K V A+ +F
Sbjct: 166 TLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ 225
Query: 256 -------------------LEFKDCIPLSSQ-----------IFNILIHGWCKTRKVDDA 285
E+K L +Q IF+ ++ CK KV +A
Sbjct: 226 GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEA 285
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ + M Q+G PDVV+YT ++ +C + + + M KG P VI+YT +++
Sbjct: 286 HEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLING 345
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K +I++A+ ++E+M + +PDT Y++L+ L GR++DA +F +M +G +P+
Sbjct: 346 YCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPD 405
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
++TY+ ++ S C E A+ LL+ +E PD + Y ++ CR ++ L +
Sbjct: 406 LVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFS 465
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK-LEKK 524
++ + TY ++ GL + G L A F EM P TY + L+
Sbjct: 466 NLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNN 525
Query: 525 RLGNAKERINKLLAHA 540
A + + ++LA
Sbjct: 526 ETLRAIQLLEEMLARG 541
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 90/366 (24%), Positives = 163/366 (44%), Gaps = 4/366 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
+Y +++D L K ++ + L +M + G + T ++++ L +
Sbjct: 198 IYTSIIDSLCKDRQVTEAFNLFSQM--VGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 255
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTR 280
M + D S ++D L K V A+++ + + + + L+ G C
Sbjct: 256 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQS 315
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++D+A K M ++GF+PDV+SYT I YC+ K +EM K P TY
Sbjct: 316 EMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYN 375
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+MH L ++ +A+ ++ +M + +PD YS L+ L K +++A + + ++
Sbjct: 376 TLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEAS 435
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ P++ YN +I C E E A L + P TY ++ C++ +
Sbjct: 436 NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEA 495
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
N L M ND S D TY ++ RG +++ + A EEM+++G ST +L E
Sbjct: 496 NKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLVEM 555
Query: 521 LEKKRL 526
L L
Sbjct: 556 LSDDGL 561
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 122/262 (46%), Gaps = 1/262 (0%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA + + P +V + + + K + V +M G P+V T I
Sbjct: 37 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++ ++ A V K+ PD + +++LI L G++ +A +F+ M +G
Sbjct: 97 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PNV+TY T+I+ C A++LL+ ME+ C+PD Y ++ C+ +++
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + M +S D TY SLV L + + + +M++ I+P + + + L
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276
Query: 522 EKK-RLGNAKERINKLLAHAKE 542
K+ ++ A E ++ ++ E
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVE 298
>gi|359491363|ref|XP_002265397.2| PREDICTED: pentatricopeptide repeat-containing protein At5g60960,
mitochondrial-like [Vitis vinifera]
Length = 516
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/392 (27%), Positives = 189/392 (48%), Gaps = 18/392 (4%)
Query: 101 SKILSKQYQSPDKVVEALK--GCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYM 158
S++L P +++ L+ ++ S L+ QTL + GF+ W + ++
Sbjct: 79 SELLKDPDSEPVPIIQRLQLSFSHITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFV 138
Query: 159 HTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
H+ E + VD G+ K F + E++ MD N + T+ + + RLVR GR V
Sbjct: 139 HSDETISFFVDYFGRRKDFKAIHEVL--MDGRN--FAGAKTLESAIDRLVRAGRATQVVS 194
Query: 219 AFRGMK-KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
F M+ YG +D +L++++ L + HA KV + I + I ++LI GWC
Sbjct: 195 FFDRMEVDYGFRRDRESLTMVVSKLCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWC 254
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE---HYCREKD-FR---KVDDTLKEMQEK 330
K+D+A++ +EMF+ GF ++Y ++ CR+KD FR + + L +M
Sbjct: 255 VDGKLDEARRLAEEMFRGGFEIGTMAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVA 314
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G +V T+ +++ L K ++ +A+K++ +M C P+ + + L L +A RV +
Sbjct: 315 GVPRNVETFNVLITNLCKIRKTEDAMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEG 374
Query: 391 NEIFEDMKKQGVVPNVL---TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+E+ + MK G N L Y I C ++A+ L KM+ED CKP +TY L
Sbjct: 375 DEMIDRMKSAG-FGNALDKKAYYEFIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLL 433
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ C R+ N L + V +++ Y
Sbjct: 434 MGKLCAHGRLDKANALFSEAVNRGVPVESKAY 465
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 186/394 (47%), Gaps = 5/394 (1%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
R+ ND A F KT+ G+ HT E Y M++ LG KF M +++ EM + + +
Sbjct: 15 RYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKM 74
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
IMR R G+ +AV F M Y E ++ + +M+ LV+ A+KV+
Sbjct: 75 LEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVY 134
Query: 256 LEFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ KD I + ++ I + +C T + A + + M QG + VSY I + +
Sbjct: 135 MRMKD-IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYK 193
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E + EM ++G P ++T+ ++H L K + E+ K++ K+ P+
Sbjct: 194 ENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
++ I L + G + +A + E + +G+ P+V++YNT+I C S+ A L KM
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMV 313
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH-MFKNDVSMDAGTYASLVRGLIESGKL 492
+P+ TY ++ C+ M+ + +L MFK + D TY+SL+ GL G +
Sbjct: 314 NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIP-DEFTYSSLINGLCNDGDM 372
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
A + F E + KG Y L + L K+ L
Sbjct: 373 NRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGL 406
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 159/318 (50%), Gaps = 6/318 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ +T+++ L + G A++ + M ++G D +++++ L K + A +
Sbjct: 390 SIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGIL 449
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ K CIP FN LI G+CK R +D A + + M G +PDV++Y + C+
Sbjct: 450 NDAIAKGCIP-DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCK 508
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ V DT K M EKGC P++ITY I++ + K ++++EA++++++MK+ PD
Sbjct: 509 ARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVT 568
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQ-GVVPNVLTYNTMISSACARSEEENALKLLQKM 432
+LI L G + A E+F ++K+ + +N MI++ C + A KL KM
Sbjct: 569 LCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKM 628
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLN-FLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
C PD TY ++ C+ + + + FLL ++ K V T ++ L + +
Sbjct: 629 GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP-SFTTCGKVLNCLCVTHR 687
Query: 492 LELACSFFEEMISKGIVP 509
L A M+ GIVP
Sbjct: 688 LSEAVVIINLMVQNGIVP 705
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 173/350 (49%), Gaps = 13/350 (3%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS----VEHAYKV 254
T S+++ L G + A+ F +EK + +L +TLVKG S V A ++
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYE----AMEKGFKHSIILYNTLVKGLSKQGLVLQALQL 413
Query: 255 FLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ + C P +N++++G CK + DA + + +G PD+ ++ I+ YC
Sbjct: 414 MKDMMEHGCSP-DIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYC 472
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
++++ K + L M G P VITY +++ L KA++++ + ++ M C P+
Sbjct: 473 KQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII 532
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+ LI K +V +A E+F++MK +G+ P+++T T+I C+ E + A +L +
Sbjct: 533 TYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTI 592
Query: 433 EEDL-CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
E++ + ++ C K + + L M +D + D TY ++ ++G
Sbjct: 593 EKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGN 652
Query: 492 LELACSFFEEMISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKLLAHA 540
++LA +F E ISKG+VP +T K+L RL A IN ++ +
Sbjct: 653 IDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNG 702
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 149/316 (47%), Gaps = 3/316 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T + ++ L R G D+A + G+ D + + L+ K + + A + +
Sbjct: 250 NLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEA-ECY 308
Query: 256 LE--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
L + + +N +I+G+CK + +A K +++ +GF PD +Y+ I C
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D + E EKG K S+I Y ++ L K + +AL++ + M C PD
Sbjct: 369 DGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWT 428
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ ++ L K G + DAN I D +G +P++ T+NT+I C + + A+++L M
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
PD TY LL C+ +++ + M + + + TY L+ + K+
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 494 LACSFFEEMISKGIVP 509
A F+EM ++G+ P
Sbjct: 549 EAMELFKEMKTRGLTP 564
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 168/387 (43%), Gaps = 6/387 (1%)
Query: 145 FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM 204
+G+F+ A M +Y + + K FC+ + LNN + +
Sbjct: 124 YGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183
Query: 205 RRLVRGGRYDD-----AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-F 258
V G Y + A F M K G+ D + L+ L K +V+ + K+F +
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K + + FNI I G C+ +D+A + ++ + +G +PDV+SY I +C+
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + L +M G +P+ TY +++ KA + A K+ +PD YSSLI
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L G + A +F + ++G +++ YNT++ + AL+L++ M E C
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PD TY ++ C+ + N +L D T+ +L+ G + ++ A
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKR 525
+ M+S GI P TY L L K R
Sbjct: 484 LDTMLSHGITPDVITYNTLLNGLCKAR 510
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 166/351 (47%), Gaps = 9/351 (2%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T + ++ L + G ++ + F + K GV + ++ + L + +++ A ++ L
Sbjct: 216 ILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARL-L 274
Query: 257 EFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E L+ + +N LI G+CK K+ +A+ + +M G P+ +Y I +C+
Sbjct: 275 ESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKA 334
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ D L++ KG P TY+ +++ L +N A+ V+ + Y
Sbjct: 335 GMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILY 394
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++L+ LSK G V A ++ +DM + G P++ TYN +++ C +A +L
Sbjct: 395 NTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIA 454
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C PD T+ L+ C+++ M +L M + ++ D TY +L+ GL ++ KL+
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDN 514
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKT 545
F+ M+ KG P TY +L E K R ++++ + KE KT
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILIESFCKDR------KVSEAMELFKEMKT 559
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 142/338 (42%), Gaps = 39/338 (11%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
D+ A F + + G+ H+ +YNT+V L K +L+K+M E + + T
Sbjct: 371 DMNRAMAVF-YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMME-HGCSPDIWT 428
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEF 258
+ ++ L + G DA G D + L+D K +++ A ++
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
I +N L++G CK RK+D+ K M ++G +P++++Y IE +C+++
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 319 KVDDTLKEMQEKGCKPSVIT------------------------------------YTIV 342
+ + KEM+ +G P ++T + I+
Sbjct: 549 EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIM 608
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++A + ++ A K++ KM DC PD Y +I K G + A+ + +G+
Sbjct: 609 INAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGL 668
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
VP+ T +++ C A+ ++ M ++ P+
Sbjct: 669 VPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 109/264 (41%), Gaps = 44/264 (16%)
Query: 274 HGWCKTRKVDDAQKAMKEMFQQ-----GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
H R +D A+K MF Q GF + +Y C IE F ++D L EM+
Sbjct: 9 HVAAVIRYQNDPLNALK-MFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR 67
Query: 329 EK-GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+ K Y +M G+ ++ EA+ V+E+M DC P Y++++ IL + G
Sbjct: 68 KNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYF 127
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A++++ MK G+ P+V T+ + S C AL+LL M C+
Sbjct: 128 SQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCE--------- 178
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+A +Y +++ G + A F+EM+ +GI
Sbjct: 179 --------------------------FNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGI 212
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKE 531
P T+ L L KK GN +E
Sbjct: 213 CPDILTFNKLIHVLCKK--GNVQE 234
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 118/256 (46%), Gaps = 29/256 (11%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
TP++ YNT+++ L K++K + + K M L G ++ T + ++ + + +A
Sbjct: 493 TPDVITYNTLLNGLCKARKLDNVVDTFKAM--LEKGCTPNIITYNILIESFCKDRKVSEA 550
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL----EFKDCIPLSSQIFNIL 272
+E F+ MK G+ D L L+ L ++ AY++F+ E+K S+ IFNI+
Sbjct: 551 MELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYK--FSYSTAIFNIM 608
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I+ +C+ V A+K +M +PD +Y I+ YC+ + L E KG
Sbjct: 609 INAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGL 668
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
PS T V++ L +++EA+ + M + +P+ + N
Sbjct: 669 VPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE------------------EVNS 710
Query: 393 IFEDMKKQGVVPNVLT 408
IFE KK+ P ++
Sbjct: 711 IFEADKKEVAAPKIVV 726
>gi|15218241|ref|NP_172439.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75097039|sp|O04491.1|PPR26_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g09680
gi|2160161|gb|AAB60724.1| F21M12.7 gene product [Arabidopsis thaliana]
gi|332190358|gb|AEE28479.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 607
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/403 (25%), Positives = 192/403 (47%), Gaps = 19/403 (4%)
Query: 145 FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV------KEMDELNNGYVSLA 198
F FF + +Q G+ T E Y + L + F L+ K + ++ ++SL
Sbjct: 102 FAFFKFISSQPGFRFTVETYFVLARFLAVHEMFTEAQSLIELVVSRKGKNSASSVFISLV 161
Query: 199 TM----------STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
M +M G DA++ FR +K+ + R L+D ++K N
Sbjct: 162 EMRVTPMCGFLVDALMITYTDLGFIPDAIQCFRLSRKHRFDVPIRGCGNLLDRMMKLNPT 221
Query: 249 EHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
+ ++E D PL+ +FNIL++ +CK + DAQK E+ ++ P VVS+
Sbjct: 222 GTIWGFYMEILDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEITKRSLQPTVVSFNTL 281
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I YC+ + + +M++ +P V TY+ +++AL K +++ A ++++M
Sbjct: 282 INGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLFDEMCKRGL 341
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
+P+ +++LI S+ G + E ++ M +G+ P+++ YNT+++ C + A
Sbjct: 342 IPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARN 401
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
++ M +PD TY L+ CR ++ + M +N + +D +++LV G+
Sbjct: 402 IVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVGFSALVCGMC 461
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
+ G++ A EM+ GI P TY M+ + KK G+A+
Sbjct: 462 KEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKK--GDAQ 502
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 144/292 (49%), Gaps = 3/292 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ + +T++ + G D+ M+K D S L++ L K N ++ A+ +F
Sbjct: 274 TVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKMDGAHGLF 333
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E + IP + IF LIHG + ++D +++ ++M +G PD+V Y + +C+
Sbjct: 334 DEMCKRGLIP-NDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTLVNGFCK 392
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D + + M +G +P ITYT ++ + + AL++ ++M + D
Sbjct: 393 NGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGIELDRVG 452
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+S+L+ + K GRV DA +M + G+ P+ +TY M+ + C + + + KLL++M+
Sbjct: 453 FSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQ 512
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
D P TY LL C+ +MK + LL M V D TY +L+ G
Sbjct: 513 SDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG 564
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/370 (22%), Positives = 169/370 (45%), Gaps = 6/370 (1%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
++D + K +W E+ L+ G+ +++ + +M + + G DA + F +
Sbjct: 209 GNLLDRMMKLNPTGTIWGFYMEI--LDAGFPLNVYVFNILMNKFCKEGNISDAQKVFDEI 266
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
K ++ + + L++ K +++ +++ + K ++ LI+ CK K+
Sbjct: 267 TKRSLQPTVVSFNTLINGYCKVGNLDEGFRLKHQMEKSRTRPDVFTYSALINALCKENKM 326
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D A EM ++G P+ V +T I + R + + ++ ++M KG +P ++ Y +
Sbjct: 327 DGAHGLFDEMCKRGLIPNDVIFTTLIHGHSRNGEIDLMKESYQKMLSKGLQPDIVLYNTL 386
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K + A + + M PD Y++LI + G V+ A EI ++M + G+
Sbjct: 387 VNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQNGI 446
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+ + ++ ++ C +A + L++M KPD TY ++ C+K +
Sbjct: 447 ELDRVGFSALVCGMCKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFK 506
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
LL M + TY L+ GL + G+++ A + M++ G+VP TY L E
Sbjct: 507 LLKEMQSDGHVPSVVTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEG-- 564
Query: 523 KKRLGNAKER 532
R N+ +R
Sbjct: 565 HHRHANSSKR 574
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 115/265 (43%), Gaps = 21/265 (7%)
Query: 90 SENHETDVDKIS--KILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGF 147
S N E D+ K S K+LSK Q PD V+ N+LV + + DL A
Sbjct: 356 SRNGEIDLMKESYQKMLSKGLQ-PDIVL----------YNTLVNGFCK--NGDLVAARNI 402
Query: 148 FTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRL 207
+ G Y T++D + E+ KEMD+ N + S ++ +
Sbjct: 403 VD-GMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMDQ-NGIELDRVGFSALVCGM 460
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ 267
+ GR DA A R M + G++ D +++MD K + +K+ E + + S
Sbjct: 461 CKEGRVIDAERALREMLRAGIKPDDVTYTMMMDAFCKKGDAQTGFKLLKEMQSDGHVPSV 520
Query: 268 I-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+ +N+L++G CK ++ +A + M G PD ++Y +E + R + K +
Sbjct: 521 VTYNVLLNGLCKLGQMKNADMLLDAMLNIGVVPDDITYNTLLEGHHRHANSSK---RYIQ 577
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQ 351
E G + +Y +++ L +A +
Sbjct: 578 KPEIGIVADLASYKSIVNELDRASK 602
>gi|334183970|ref|NP_177858.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332197845|gb|AEE35966.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 402
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 147/277 (53%), Gaps = 2/277 (0%)
Query: 238 LMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L+ +L + VE +++ E +D + FN L++G+CK V +A++ + + Q G
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
PD +YT FI +CR K+ KEM + GC + ++YT +++ L +AK+I+EAL
Sbjct: 186 CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEAL 245
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ KMK D+C P+ Y+ LI L +G+ +A +F+ M + G+ P+ Y +I S
Sbjct: 246 SLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSF 305
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
C+ + A LL+ M E+ P+ TY L+K C+K K + LL+ M + ++ D
Sbjct: 306 CSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMG-LLSKMLEQNLVPDL 364
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
TY +L+ G SG L+ A M G+VP T
Sbjct: 365 ITYNTLIAGQCSSGNLDSAYRLLSLMEESGLVPNQRT 401
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 47/298 (15%)
Query: 241 TLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
T+ KG+S E YK L+ + +N L+ + V++ ++ EM + SPD
Sbjct: 105 TMRKGDSFEIKYK----------LTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPD 154
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+ ++ + YC+ + + + + GC P TYT + + K++
Sbjct: 155 IYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEV-------- 206
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
D +F ++F++M + G N ++Y +I
Sbjct: 207 ---------DAAF------------------KVFKEMTQNGCHRNEVSYTQLIYGLFEAK 239
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLL-KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ + AL LL KM++D C P+ TY L+ +C ++ + +N L M ++ + D Y
Sbjct: 240 KIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMN-LFKQMSESGIKPDDCMY 298
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
L++ L+ A E M+ G++P TY L + KK + A ++K+L
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKML 356
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 3/205 (1%)
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ +L + + E ++Y +M D PD +++L+ K G V +A + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ G P+ TY + I+ C R E + A K+ ++M ++ C + +Y L+ K++
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
LL M ++ + TY L+ L SG+ A + F++M GI P Y +L
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 519 EKLEKKRLGNAKERINKLLAHAKEQ 543
+ G+ + + LL H E
Sbjct: 303 QSFCS---GDTLDEASGLLEHMLEN 324
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 89/191 (46%), Gaps = 3/191 (1%)
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
+++ KEM + N + + + + ++ L + D+A+ MK + R +VL+D
Sbjct: 210 FKVFKEMTQ-NGCHRNEVSYTQLIYGLFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLID 268
Query: 241 TLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L A +F + + I ++ +LI +C +D+A ++ M + G P
Sbjct: 269 ALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMP 328
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+V++Y I+ +C+ K+ K L +M E+ P +ITY ++ + ++ A ++
Sbjct: 329 NVITYNALIKGFCK-KNVHKAMGLLSKMLEQNLVPDLITYNTLIAGQCSSGNLDSAYRLL 387
Query: 360 EKMKSDDCLPD 370
M+ +P+
Sbjct: 388 SLMEESGLVPN 398
>gi|356508608|ref|XP_003523047.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Glycine max]
Length = 879
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 99/368 (26%), Positives = 179/368 (48%), Gaps = 5/368 (1%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V ++ K + KQ + + L S+ Q L++ D + A GFF W K Q G
Sbjct: 320 VVEVVKDILKQLRWGPATEKTLYNLNFSIDAYQANQILKQLQ-DHSVAVGFFCWLKRQPG 378
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ H Y TMV +LG++++F + +L+++M + + ++ T + ++ R +A
Sbjct: 379 FWHDGHTYTTMVGILGRAREFGAINKLLEQMVK-DGCQPNVVTYNRLIHSYGRANYLREA 437
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NILIH 274
+ F M++ G E D L+D K ++ A ++ ++ + LS F +++I+
Sbjct: 438 LNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQE-VGLSPDTFTYSVMIN 496
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
K+ + A + EM QG P++V+Y I + ++++ + ++MQ G KP
Sbjct: 497 CLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKP 556
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+TY+IVM LG + EA V+ +M+ + +PD Y L+ + KAG V+ A E +
Sbjct: 557 DKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWY 616
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
M + G++PNV T N+++S+ +A LLQ M P +TY LL C
Sbjct: 617 HTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYTLLLSCCTEA 676
Query: 455 KRMKVLNF 462
+ + F
Sbjct: 677 QSPYDMGF 684
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 131/261 (50%), Gaps = 1/261 (0%)
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ R+ K +++M + G P+VV+Y I Y R R+ + +MQE GC+P +
Sbjct: 395 RAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQMQEMGCEPDRV 454
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++ KA ++ A+ +YE+M+ PDT YS +I L K+G + A+ +F +M
Sbjct: 455 TYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNLSAAHRLFCEM 514
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
QG VPN++TYN +I+ + AL+L + M+ KPD TY+ ++++ +
Sbjct: 515 VDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIVMEVLGHCGYL 574
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST-YKM 516
+ + M +N D Y LV ++G +E A ++ M+ G++P T +
Sbjct: 575 EEAEAVFFEMRQNHWVPDEPVYGLLVDLWGKAGNVEKAWEWYHTMLRAGLLPNVPTCNSL 634
Query: 517 LEEKLEKKRLGNAKERINKLL 537
L L RL +A + ++
Sbjct: 635 LSAFLRVHRLPDAYNLLQNMV 655
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 113/224 (50%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q GF D +YT + R ++F ++ L++M + GC+P+V+TY ++H+ G+A +
Sbjct: 376 QPGFWHDGHTYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLR 435
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EAL V+ +M+ C PD Y +LI I +KAG + A ++E M++ G+ P+ TY+ MI
Sbjct: 436 EALNVFNQMQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMI 495
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ A +L +M + C P+ TY L+ + + + + L M
Sbjct: 496 NCLGKSGNLSAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFK 555
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
D TY+ ++ L G LE A + F EM VP Y +L
Sbjct: 556 PDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVPDEPVYGLL 599
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%)
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYT ++ LG+A++ K+ E+M D C P+ Y+ LI +A +++A +F M
Sbjct: 385 TYTTMVGILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQM 444
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
++ G P+ +TY T+I + A+ + ++M+E PD TY+ ++ + +
Sbjct: 445 QEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGNL 504
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ L M + TY L+ ++ + A + +M + G P TY ++
Sbjct: 505 SAAHRLFCEMVDQGCVPNIVTYNILIALQAKARNYQTALELYRDMQNAGFKPDKVTYSIV 564
Query: 518 EEKL 521
E L
Sbjct: 565 MEVL 568
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 113/282 (40%), Gaps = 41/282 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ M++ LGKS L EM ++ G V ++ T + ++ + Y A+E +R
Sbjct: 491 YSVMINCLGKSGNLSAAHRLFCEM--VDQGCVPNIVTYNILIALQAKARNYQTALELYRD 548
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTR 280
M+ G + D S++M+ L +E A VF E + +P ++ +L+ W K
Sbjct: 549 MQNAGFKPDKVTYSIVMEVLGHCGYLEEAEAVFFEMRQNHWVP-DEPVYGLLVDLWGKAG 607
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V+ A + M + G P+V + + + R + L+ M G PS+ TYT
Sbjct: 608 NVEKAWEWYHTMLRAGLLPNVPTCNSLLSAFLRVHRLPDAYNLLQNMVTLGLNPSLQTYT 667
Query: 341 IV---------------------------------MHALGKAKQ--INEALKVYEKMKSD 365
++ M A G Q + K + M S+
Sbjct: 668 LLLSCCTEAQSPYDMGFCCELMAVSGHPAHAFLQSMPAAGPDGQNVRDHVSKFLDLMHSE 727
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
D +++ L K+G ++A ++E ++ V P+ +
Sbjct: 728 DREGKRGLVDAVVDFLHKSGLKEEAGSVWEVAAQKNVYPDAV 769
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 62/127 (48%), Gaps = 2/127 (1%)
Query: 408 TYNTMISSACARSEEENAL-KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
TY TM+ R+ E A+ KLL++M +D C+P+ TY L+ R ++ +
Sbjct: 385 TYTTMVG-ILGRAREFGAINKLLEQMVKDGCQPNVVTYNRLIHSYGRANYLREALNVFNQ 443
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
M + D TY +L+ ++G L++A S +E M G+ P TY ++ L K
Sbjct: 444 MQEMGCEPDRVTYCTLIDIHAKAGFLDVAMSMYERMQEVGLSPDTFTYSVMINCLGKSGN 503
Query: 527 GNAKERI 533
+A R+
Sbjct: 504 LSAAHRL 510
>gi|297734081|emb|CBI15328.3| unnamed protein product [Vitis vinifera]
Length = 532
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 104/368 (28%), Positives = 179/368 (48%), Gaps = 16/368 (4%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
++ S L+ QTL + GF+ W + ++H+ E + VD G+ K F + E
Sbjct: 119 ITPSPPLILQTLNTSPDAGRTVLGFYKWLSSNPKFVHSDETISFFVDYFGRRKDFKAIHE 178
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK-KYGVEKDTRALSVLMDT 241
++ MD N + T+ + + RLVR GR V F M+ YG +D +L++++
Sbjct: 179 VL--MDGRN--FAGAKTLESAIDRLVRAGRATQVVSFFDRMEVDYGFRRDRESLTMVVSK 234
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
L + HA KV + I + I ++LI GWC K+D+A++ +EMF+ GF
Sbjct: 235 LCEHGFASHAEKVVKNVANEIFPNETICDLLIKGWCVDGKLDEARRLAEEMFRGGFEIGT 294
Query: 302 VSYTCFIE---HYCREKD-FR---KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
++Y ++ CR+KD FR + + L +M G +V T+ +++ L K ++ +
Sbjct: 295 MAYNSILDCICKLCRKKDPFRLESEAEKILVDMDVAGVPRNVETFNVLITNLCKIRKTED 354
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL---TYNT 411
A+K++ +M C P+ + + L L +A RV + +E+ + MK G N L Y
Sbjct: 355 AMKLFYRMGEWGCYPNETTFLVLTRSLYQAARVGEGDEMIDRMKSAG-FGNALDKKAYYE 413
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
I C ++A+ L KM+ED CKP +TY L+ C R+ N L +
Sbjct: 414 FIKILCGIERIDHAMSLFSKMKEDGCKPGIKTYDLLMGKLCAHGRLDKANALFSEAVNRG 473
Query: 472 VSMDAGTY 479
V +++ Y
Sbjct: 474 VPVESKAY 481
>gi|449444202|ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
Length = 532
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 201/418 (48%), Gaps = 10/418 (2%)
Query: 106 KQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTW----AKTQTGYMHTP 161
++++ + + AL C + +++ V + LRR +D PAF FF W + +
Sbjct: 102 RRHKPVEDIERALSLCDLVLTDDFVLKVLRRHRSDWNPAFIFFNWVLKRGTNEEKFTPGS 161
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
+YN ++ +LGK ++F + +++ EM + V+ T S ++ R + ++A+ F
Sbjct: 162 VIYNEILVILGKFRRFEEVDKVLVEMSK-RKELVNEETYSVLLNRYAAAHKVEEAISIFY 220
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRK 281
+++G+E + A L+ L + VE A +F K + NI+++GWC
Sbjct: 221 RRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHSKKHEFVTDIKTSNIILNGWCVLGN 280
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V +A++ +E+ + PD+ +Y I ++ + M E+G V+
Sbjct: 281 VHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVICNC 340
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM--KK 399
++ AL K+I EAL+++++M C + + Y++LI L K R++ NE+ +M +K
Sbjct: 341 IIDALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERK 400
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
PN +T+ ++ S R EE + L Q+ME CK + Y +L++ +
Sbjct: 401 GSCWPNSVTFIYLLGS--VRGPEEVPV-LFQRMERSGCKMTSDIYNLILRLYMDWDIQER 457
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ M + + D +Y ++ GL E G+ + +F EM KGI+P T K++
Sbjct: 458 VKSTWNEMKEMGLGPDRRSYTIMIHGLYEKGRTKDGLRYFNEMTLKGIMPEPKTEKLV 515
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 116/251 (46%), Gaps = 4/251 (1%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
++ F+P V Y + + + F +VD L EM ++ + TY+++++ A ++
Sbjct: 154 EEKFTPGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKELVNEETYSVLLNRYAAAHKVE 213
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EA+ ++ + + + + SL+ L + V+ A +F KK V ++ T N ++
Sbjct: 214 EAISIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHS-KKHEFVTDIKTSNIIL 272
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ C A + +++ E C+PD TY L+ +K ++ L M++ ++
Sbjct: 273 NGWCVLGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLT 332
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
D ++ L ++ A F+EM +G +TY L + L K R E++
Sbjct: 333 TDVVICNCIIDALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHLCKIR---RMEKV 389
Query: 534 NKLLAHAKEQK 544
N+LL +E+K
Sbjct: 390 NELLNEMEERK 400
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 118/453 (26%), Positives = 200/453 (44%), Gaps = 79/453 (17%)
Query: 137 FSNDLTP--AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY 194
FS DL P A F W Y H+ Y +++ +L +NNGY
Sbjct: 97 FSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLL------------------INNGY 138
Query: 195 VSLA--------------TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
V + + + L R D++ E KY + + L++
Sbjct: 139 VGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFEL-----KYKL--IIGCYNTLLN 191
Query: 241 TLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
+L + V+ +V++E +D + + +N +++G+CK V++A + + + + G P
Sbjct: 192 SLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDP 251
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D +YT I YC+ KD KEM KGC+ + + YT ++H L ++I+EA+ ++
Sbjct: 252 DFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLF 311
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGR--------------------------------- 386
KMK DDC P Y+ LI L + R
Sbjct: 312 VKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQ 371
Query: 387 --VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
++ A E+ M ++G++PNV+TYN +I+ C R E+AL +++ ME +P+ TY
Sbjct: 372 CKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTY 431
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+K C++ K + +L M + V D TY SL+ G SG + A M
Sbjct: 432 NELIKGYCKRNVHKAMG-VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMND 490
Query: 505 KGIVPYHSTY-KMLEEKLEKKRLGNAKERINKL 536
+G+VP TY M++ + KR+ A + + L
Sbjct: 491 RGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSL 523
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 181/375 (48%), Gaps = 8/375 (2%)
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
+HT Y ++D L K EL+ +M L G + ++ T + ++ + G +DA
Sbjct: 358 IHT---YTVLIDSLCSQCKLEKARELLGQM--LEKGLMPNVITYNALINGYCKRGMIEDA 412
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHG 275
++ M+ + +TR + L+ K N V A V + + L + +N LI G
Sbjct: 413 LDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDG 471
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
C++ D A + + M +G PD +YT I+ C+ K + D +++K P+
Sbjct: 472 QCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPN 531
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+ YT ++ KA ++NEA + EKM S +CLP++ +++LI L G++K+A + E
Sbjct: 532 VVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEE 591
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M K + P V T +I + ++A + Q+M KPD TY ++ CR+
Sbjct: 592 KMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREG 651
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
R++ ++ M +N VS D TY+SL++G + G+ A + M G P T+
Sbjct: 652 RLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFL 711
Query: 516 MLEEKLEKKRLGNAK 530
L + L + + G K
Sbjct: 712 SLIKHLLEMKYGKVK 726
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 170/392 (43%), Gaps = 60/392 (15%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF- 255
+ T ++++ R G +D A M G+ D + ++D+L K VE A +F
Sbjct: 462 VVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFD 521
Query: 256 -LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
LE KD IP + ++ LI G+CK KV++A +++M + P+ +++ I C +
Sbjct: 522 SLEQKDVIP-NVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTD 580
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
++ ++M + +P+V T TI++H L K + A + +++M S PD Y
Sbjct: 581 GKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTY 640
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI--------------------S 414
++ I + GR++DA ++ MK+ GV P++ TY+++I
Sbjct: 641 TTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHD 700
Query: 415 SACARSEE---------------------------------ENALKLLQKMEEDLCKPDC 441
+ C S+ + ++LL+KM E P+
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNA 760
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHM-FKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
++Y L+ C ++V + HM K +S + +L+ + K A +
Sbjct: 761 KSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVD 820
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKER 532
+MI G +P + K+L +L KK KER
Sbjct: 821 DMICVGHLPQLESCKILICRLYKK---GEKER 849
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 108/271 (39%), Gaps = 20/271 (7%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T ++ R GR DA + MK+ GV D S L+ A+ V
Sbjct: 639 TYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRM 698
Query: 259 KD--CIPLSSQIFNILIH--------------GWC---KTRKVDDAQKAMKEMFQQGFSP 299
D C P +++ H G C + D + +++M + G +P
Sbjct: 699 HDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTP 758
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GCKPSVITYTIVMHALGKAKQINEALKV 358
+ SY + C + R + MQ+K G PS + + ++ K ++ NEA KV
Sbjct: 759 NAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKV 818
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+ M LP LI L K G + +F+++ + G + L + +I
Sbjct: 819 VDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGK 878
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
+ E +L ME++ C +TY+ L++
Sbjct: 879 QGLVEAFYELFNVMEKNGCTFSSQTYSLLIE 909
>gi|147827256|emb|CAN64312.1| hypothetical protein VITISV_027954 [Vitis vinifera]
Length = 655
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 187/394 (47%), Gaps = 49/394 (12%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWEL 183
S +S V QTL ++ND A FF W +TQ G+ HT + YN M+D+LGK +F L+W L
Sbjct: 286 SFDHSTVRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVL 345
Query: 184 VKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
++ M Y + T + +R ++A+ A+ +++ + +D + S L+D L
Sbjct: 346 IQRMKADPVAYPNHVTFRFVFKRYAAAHLVEEAMNAYYRTEEFNL-RDETSYSNLIDALC 404
Query: 244 KGNSVEHAYKVFL-EFKDCIPLSS-QIFNILIHGW--------CKTRKVDDAQKAMKEMF 293
+ V A ++FL E KD + +I+NI++ GW CK+ K A K KEM
Sbjct: 405 EYKHVIEAEELFLKESKDLVFNDDVKIYNIILRGWFKNGVVEECKSGKPWRAVKLYKEMK 464
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
++G DVV+Y I + +E +E GC+P+V+TY ++ L + +I
Sbjct: 465 KKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREXKEVGCEPNVVTYNTIIKLLCENGRIR 524
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EA V+++ M+++G PNV+TY+
Sbjct: 525 EAYGVFDQ-----------------------------------MREKGYAPNVITYHCFF 549
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C ++ L+ +M +P +TY L+K R ++ + + M + S
Sbjct: 550 --GCIEKPKQ-ILRTFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCS 606
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
DA Y +L+ L++ G ++LA + EEM++KG+
Sbjct: 607 PDACAYNALIDALVQKGMVDLARKYEEEMLAKGL 640
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 97/195 (49%), Gaps = 12/195 (6%)
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPD---------TSFYSSLIFILSKAGRVK 388
+Y+ ++ AL + K + EA +++ K D D ++ + + K+G+
Sbjct: 395 SYSNLIDALCEYKHVIEAEELFLKESKDLVFNDDVKIYNIILRGWFKNGVVEECKSGKPW 454
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
A +++++MKK+G+ +V+ YNT+I + + ++++ ++ +E C+P+ TY ++
Sbjct: 455 RAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREXKEVGCEPNVVTYNTII 514
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
K+ C R++ + M + + + TY G IE K L F+ MI+ G+
Sbjct: 515 KLLCENGRIREAYGVFDQMREKGYAPNVITYHCFF-GCIEKPKQILRT--FDRMINSGVR 571
Query: 509 PYHSTYKMLEEKLEK 523
P TY ML +K +
Sbjct: 572 PRMDTYVMLMKKFGR 586
>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
Length = 721
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 108/391 (27%), Positives = 189/391 (48%), Gaps = 24/391 (6%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN--NGYVSLATMSTIMRRLVRGGR- 212
G +P ++N++V +S + ++L+K+M + GYV + + G+
Sbjct: 107 GCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKD 166
Query: 213 -YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIF 269
D A +A+ M + GV + +S L E AY V E K IP +S +
Sbjct: 167 VLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTST-Y 225
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+ +I C KV+ A + +EM + G +PDV YT I+ +C+ + + EM+
Sbjct: 226 SKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMER 285
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
GC P+V+TYT ++HA K++++++A +VYE M S C P+ Y++LI L KAG+++
Sbjct: 286 DGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEK 345
Query: 390 ANEIFEDMKKQGV-----------------VPNVLTYNTMISSACARSEEENALKLLQKM 432
A++I++ MKK+ V PNV TY ++ C + + A LL+ M
Sbjct: 346 ASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSM 405
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ C+P+ Y L+ CC+ ++ + T M + + TY+SL+ L + +L
Sbjct: 406 SVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRL 465
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+LA +M+ P Y + + L K
Sbjct: 466 DLALKVLSKMLENSCAPNVVIYTEMIDGLCK 496
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 172/361 (47%), Gaps = 25/361 (6%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y ++ KS+K E+ + M L+ G ++ T + ++ L + G+ + A + ++
Sbjct: 295 YTALIHAYLKSRKVSKANEVYEMM--LSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKI 352
Query: 223 MKKYGVE-----------------KDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIP 263
MKK VE + L+D L K V+ A + + + C P
Sbjct: 353 MKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEP 412
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ +++ LI G CK K+D+AQ+ M + G+ P+V +Y+ I+ ++K
Sbjct: 413 -NHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKV 471
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
L +M E C P+V+ YT ++ L K + +EA K+ M+ C P+ Y+++I K
Sbjct: 472 LSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGK 531
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
+GRV+ E+ + M +G PN +TY +I+ C+ + A KLL++M++
Sbjct: 532 SGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAG 591
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y +++ R+ + +L + +ND A Y L+ I++G+LE+A EE+
Sbjct: 592 YRKVIEGFNREFIASL--YLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEELS 649
Query: 504 S 504
S
Sbjct: 650 S 650
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 167/392 (42%), Gaps = 22/392 (5%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
AF F K + G +Y T++D K+ EM E + ++ T + +
Sbjct: 241 AFQLFQEMK-RNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEM-ERDGCAPNVVTYTAL 298
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-------- 255
+ ++ + A E + M G + + L+D L K +E A +++
Sbjct: 299 IHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENV 358
Query: 256 ------LEFKDCIPLSSQ----IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
+ F+ S++ + L+ G CK +V +A+ +K M +G P+ V Y
Sbjct: 359 EIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYD 418
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I+ C+ + + M E G P+V TY+ ++ L K K+++ ALKV KM +
Sbjct: 419 ALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLEN 478
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
C P+ Y+ +I L K G+ +A ++ M+++G PNV+TY MI E
Sbjct: 479 SCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKC 538
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L+LLQ+M C P+ TY L+ CC + + LL M + Y ++ G
Sbjct: 539 LELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEG 598
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L SF E+ VP Y++L
Sbjct: 599 FNREFIASLYLSF--EISENDSVPVAPVYRVL 628
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 131/283 (46%), Gaps = 8/283 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ GY Y++++D L K K+ L +++ +M E N+ ++ + ++ L + G+
Sbjct: 442 ECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLE-NSCAPNVVIYTEMIDGLCKVGKT 500
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNI 271
D+A + M++ G + + ++D K VE ++ + K C P + + +
Sbjct: 501 DEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAP-NFVTYRV 559
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI+ C T +D+A K ++EM Q + V Y IE + RE F E+ E
Sbjct: 560 LINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNRE--FIASLYLSFEISEND 617
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL--PDTSFYSSLIFILSKAGRVKD 389
P Y +++ KA ++ AL++ E++ S + + + +LI LS A +
Sbjct: 618 SVPVAPVYRVLIDNFIKAGRLEIALELNEELSSFSPFSAANQNIHITLIENLSLAHKADK 677
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
A E++ DM +G +P + +I + E AL+LL +
Sbjct: 678 AFELYADMISRGSIPELSILVHLIKGLLRVNRWEEALQLLDSI 720
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 178/354 (50%), Gaps = 4/354 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYD 214
G H + ++ + +F L L+ +M +L G+ S+ T+ +++ +G R+
Sbjct: 645 GISHDLYSFTILIHCFCRCSRFSLALALLGKMMKL--GFQPSIVTLGSLLNGFCQGNRFQ 702
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILI 273
+AV M + G+E + + +++ L K + +A ++F K I + +N LI
Sbjct: 703 EAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLI 762
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G C + + DA + +++M ++ P+V+ +T I+ + +E + + + KEM +
Sbjct: 763 SGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVH 822
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+++TY +++ ++ +A +++ M S C PD Y++LI K+ RV+D ++
Sbjct: 823 PNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 882
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
F +M QG+V + TYNT+I C + A K+ +M + PD TY LL C
Sbjct: 883 FCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCN 942
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+++ ++ + KN + +D TY +++G+ + K++ A F + KG+
Sbjct: 943 NGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGV 996
Score = 135 bits (341), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 153/331 (46%), Gaps = 9/331 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + ++ + + ++D + F M+ G+ D + ++L+ + + A +
Sbjct: 614 SIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFTILIHCFCRCSRFSLALALL 673
Query: 256 -----LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
L F+ I + N G+C+ + +A + M + G P+VV Y I
Sbjct: 674 GKMMKLGFQPSIVTLGSLLN----GFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVING 729
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
C+ +D + M++KG +TY ++ L + + +A ++ M P+
Sbjct: 730 LCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPN 789
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
F+++LI K G + +A ++++M ++ V PN+LTYN++I+ C + +A +
Sbjct: 790 VIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFD 849
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
M C PD TY L+ C+ KR++ L M + DA TY +L+ G ++G
Sbjct: 850 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAG 909
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
KL +A F M+ G+ P TY +L + L
Sbjct: 910 KLNVAQKVFNRMVDCGVPPDIVTYNILLDCL 940
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 158/333 (47%), Gaps = 3/333 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFN 270
RY+ + + M+ +G+ D + ++L+ + + + A + + K S F
Sbjct: 80 RYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFG 139
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
L+HG+C ++ DA + M + G+ P+VV Y I+ C+ D + L EM++K
Sbjct: 140 SLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKK 199
Query: 331 G-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
G ++TY ++ L + + +A ++ M PD +++LI K G + +
Sbjct: 200 GRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDE 259
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A E+++ M + + PN +TYN++I+ C +A K M C P+ TY L+
Sbjct: 260 AQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLIN 319
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ +R++ L M++ + D TY +L+ G + GKL +A F M+S G+ P
Sbjct: 320 GFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTP 379
Query: 510 YHSTYKMLEEKL-EKKRLGNAKERINKLLAHAK 541
T+ +L L +G+A + N + + K
Sbjct: 380 DIITHCILLHGLCVNGEIGSAMVKFNDMRSGEK 412
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 147/334 (44%), Gaps = 39/334 (11%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
N + AF + ++GY +YNT++D L K+ + EL+ EM++ L
Sbjct: 149 NRIHDAFSLVA-SMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLV 207
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE--------- 249
T +T++ L G + A R M K + D + L+D VK +++
Sbjct: 208 TYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM 267
Query: 250 --------------------------HAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
HA K F + K C P + +N LI+G+CK+R+
Sbjct: 268 LQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFP-NVVTYNTLINGFCKSRR 326
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V+D K + M+++G D +Y I YC+ R D M G P +IT+ I
Sbjct: 327 VEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCI 386
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H L +I A+ + M+S + Y+ +I L KA +V++A E+F + +G
Sbjct: 387 LLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEG 446
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
V P+ TY MI C A +L ++M+ED
Sbjct: 447 VKPDARTYTIMILGLCKNGPRREADELFRRMKED 480
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 174/387 (44%), Gaps = 10/387 (2%)
Query: 134 LRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG 193
LRR+ + +F+ G H + ++ + + L ++ +M +L G
Sbjct: 78 LRRYETVI-----YFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSILGKMMKL--G 130
Query: 194 Y-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
Y S+ T +++ R DA M K G E + + L+D L K V A
Sbjct: 131 YDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIAL 190
Query: 253 KVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
++ E + L++ + +N L+ G C + + A + +++M ++ +PDV ++T I+
Sbjct: 191 ELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDA 250
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
+ ++ + + + K+M + P+ +TY +++ L ++ A K ++ M S C P+
Sbjct: 251 FVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPN 310
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y++LI K+ RV+D ++F+ M ++G+V + TYNT+I C + A +
Sbjct: 311 VVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFS 370
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
M PD T+ LL C + M + + Y ++ GL ++
Sbjct: 371 WMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKAD 430
Query: 491 KLELACSFFEEMISKGIVPYHSTYKML 517
K+E A F + +G+ P TY ++
Sbjct: 431 KVEEAWELFCRLPVEGVKPDARTYTIM 457
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 152/310 (49%), Gaps = 10/310 (3%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFR 221
+YNT+++ L K++ E+ M++ G V+ A T +T++ L GR+ DA R
Sbjct: 722 IYNTVINGLCKNRDLNNALEIFYGMEK--KGIVADAVTYNTLISGLCNSGRWTDAARLLR 779
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTR 280
M K ++ + + L+DT VK ++ A ++ E + + + +N LI+G+C
Sbjct: 780 DMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQG 839
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKPSVI 337
++ DA+ M +G PDVV+Y I +C+ K +V+D +K EM +G
Sbjct: 840 RLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSK---RVEDGMKLFCEMTHQGLVGDAF 896
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++H +A ++N A KV+ +M PD Y+ L+ L G+++ A + ED+
Sbjct: 897 TYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDL 956
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+K + +++TYN +I C + + A L + + K D Y ++ CR
Sbjct: 957 QKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLR 1016
Query: 458 KVLNFLLTHM 467
+ + L T M
Sbjct: 1017 READKLCTRM 1026
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 116/259 (44%), Gaps = 1/259 (0%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA EM Q P +V +T + + F V +M+ G + ++T
Sbjct: 595 KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I++H + + + AL + KM P SL+ + R ++A + + M +
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ PNV+ YNT+I+ C + NAL++ ME+ D TY L+ C R
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
LL M K + + + +L+ ++ G L A + ++EMI + + P TY L
Sbjct: 775 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834
Query: 521 L-EKKRLGNAKERINKLLA 538
+ RLG+AK + +++
Sbjct: 835 FCIQGRLGDAKHMFDLMVS 853
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/259 (26%), Positives = 116/259 (44%), Gaps = 2/259 (0%)
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+ + + +DA EM Q P VV +T + + + V ++M+ G
Sbjct: 39 GFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISH 98
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ ++TI++H + +++ AL + KM P + SL+ R+ DA +
Sbjct: 99 DLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLV 158
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME-EDLCKPDCETYAPLLKMCCR 453
M K G PNV+ YNT+I C + AL+LL +ME + D TY LL C
Sbjct: 159 ASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCY 218
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+ +L M K ++ D T+ +L+ ++ G L+ A +++M+ I P T
Sbjct: 219 SGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVT 278
Query: 514 YKMLEEKL-EKKRLGNAKE 531
Y L L RL +AK+
Sbjct: 279 YNSLINGLCMHGRLYHAKK 297
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 185/398 (46%), Gaps = 37/398 (9%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
D A F A Q G+ H+ Y+T++ LG++++F M L+++M + Y
Sbjct: 112 DALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGCPYTP-GL 170
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
I+ G ++A++AF M ++G E + +VL+ L++ +E A +F +
Sbjct: 171 FVDIIEIYGEVGMPNEAIKAFHQMLEFGYEPLAKHFNVLLIVLIEHKCLETALSLFKKLH 230
Query: 260 D-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
+ I +++ +NILI C + K+ A +M +QG PDV +Y+ ++ CR+ +
Sbjct: 231 EFGISPNTRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVK 290
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
L EM KG P +TY ++++L + + EA ++ KMK C PD Y+++I
Sbjct: 291 TALGVLDEMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVI 350
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ GR DA +I DM + G +PN L+Y T+++ C + + A +++M
Sbjct: 351 TGFCREGRALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEM------ 404
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
+ N + H+ Y L+ GL GK+ AC
Sbjct: 405 --------------------ISNGFIPHI---------SIYHLLITGLCNEGKVGEACEV 435
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
M + + P+ ST+ +L ++ + A+E ++KL
Sbjct: 436 LVMMTKQTLAPHESTWSVLLMRICEDSQTEARELVDKL 473
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/356 (26%), Positives = 183/356 (51%), Gaps = 4/356 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y +++ + KS L +L ++M+E + S+ S ++ L + G DDA+ F M
Sbjct: 212 YGPVLNRMCKSGNTALALDLFRKMEE-RSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM 270
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ G++ D A S ++ L + K+ E ++ IP + F+ LI + K K
Sbjct: 271 EMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIP-NVVTFSALIDVFVKEGK 329
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A++ EM +G +PD ++Y+ I+ +C+E + + L M KGC+P+++TY+I
Sbjct: 330 LLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSI 389
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++ KAK+++ ++++ ++ S + DT Y++L+ ++G++ A E+F++M +G
Sbjct: 390 LINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRG 449
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V P+V+TY ++ C E + AL++ +KM++ Y ++ C ++
Sbjct: 450 VPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAW 509
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + V D TY ++ GL + G L A F +M G P TY +L
Sbjct: 510 SLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNIL 565
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 160/332 (48%), Gaps = 11/332 (3%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++ R+ + G A++ FR M++ ++ S+++D+L K +++ A +F E
Sbjct: 211 TYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEM 270
Query: 259 K------DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ D + SS +I G C + DD K ++EM + P+VV+++ I+ +
Sbjct: 271 EMKGIKADVVAYSS-----IIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFV 325
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+E + + EM +G P ITY+ ++ K ++ EA ++ + M S C P+
Sbjct: 326 KEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIV 385
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
YS LI KA RV + +F ++ +G+V + +TYNT++ C + A +L Q+M
Sbjct: 386 TYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEM 445
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
P TY LL C ++ + M K+ + + G Y ++ G+ + K+
Sbjct: 446 VSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKV 505
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ A S F + KG+ P TY ++ L KK
Sbjct: 506 DDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKK 537
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 133/256 (51%), Gaps = 3/256 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T S ++ V+ G+ +A E + M G+ DT S L+D K N + A ++
Sbjct: 313 NVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQML 372
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ K C P + ++ILI+ +CK ++VD+ + E+ +G D V+Y ++ +C+
Sbjct: 373 DLMVSKGCEP-NIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQ 431
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ +EM +G PSV+TY I++ L ++ +AL+++EKM+ +
Sbjct: 432 SGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGI 491
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ +I + A +V DA +F + +GV P+VLTYN MI C + A L +KM+
Sbjct: 492 YNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMK 551
Query: 434 EDLCKPDCETYAPLLK 449
ED C P TY L++
Sbjct: 552 EDGCAPSDCTYNILIR 567
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 173/369 (46%), Gaps = 4/369 (1%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRY 213
G H N M++ + +K + +V L G+ + T ST++ GR
Sbjct: 98 NGIEHNMYTMNIMINCFCRKRKLLFAFSVVGR--ALKFGFEPNTITFSTLINGFCLEGRV 155
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTL-VKGNSVEHAYKVFLEFKDCIPLSSQIFNIL 272
+AV M + + ++ L++ L +KG E + K + + +
Sbjct: 156 SEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPV 215
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
++ CK+ A ++M ++ VV Y+ I+ C++ + EM+ KG
Sbjct: 216 LNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGI 275
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
K V+ Y+ ++ L + ++ K+ +M + +P+ +S+LI + K G++ +A E
Sbjct: 276 KADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKE 335
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
++ +M +G+ P+ +TY+++I C + A ++L M C+P+ TY+ L+ C
Sbjct: 336 LYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYC 395
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ KR+ L + + D TY +LV+G +SGKL +A F+EM+S+G+ P
Sbjct: 396 KAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVV 455
Query: 513 TYKMLEEKL 521
TY +L + L
Sbjct: 456 TYGILLDGL 464
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 130/301 (43%), Gaps = 2/301 (0%)
Query: 248 VEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
V A +F PL S I F+ L + ++ D KEM G ++ +
Sbjct: 50 VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I +CR++ + + G +P+ IT++ +++ +++EA+ + ++M
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
P+ ++LI L GRV +A + + M K G N +TY +++ C AL
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALAL 229
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
L +KMEE K Y+ ++ C+ + L M + D Y+S++ GL
Sbjct: 230 DLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGGL 289
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAKEQKT 545
G+ + EMI + I+P T+ L + K+ +L AKE N+++A T
Sbjct: 290 CNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDT 349
Query: 546 F 546
Sbjct: 350 I 350
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 108/236 (45%), Gaps = 4/236 (1%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
KV++A + M Q P ++ ++ R K++ V KEM G + ++ T
Sbjct: 49 KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + +++ A V + P+T +S+LI GRV +A + + M +
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
PNV+T NT+I+ C + AL L+ +M + C+ + TY P+L C+ +
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI----VPYHS 512
L M + + Y+ ++ L + G L+ A S F EM KGI V Y S
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSS 284
>gi|449435418|ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Cucumis sativus]
Length = 514
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 197/405 (48%), Gaps = 36/405 (8%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN--------NGYVSL---------- 197
G+ TP Y+ + L + K F L+ L+++M +L N Y++L
Sbjct: 74 GFSLTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELA 133
Query: 198 ----------------ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
T + I+ RL + +YD AVE +R M G+ D +A + L+
Sbjct: 134 LKFFDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVG 193
Query: 242 LVKGNSVEHAYKVFL-EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
L G V+ AY++ + E K + ++ IFN L+ G+CK+ ++ A M + G PD
Sbjct: 194 LCDGGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPD 253
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+++Y + +C ++K+M+ G +P V +Y ++ L KA ++++A K+
Sbjct: 254 LITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMN 313
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
M + L DT Y+++I L K+ + A +FE+M ++ V P+V T+ T+I +
Sbjct: 314 TM-WEKGLCDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEG 372
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
A LLQ M + + PD Y ++ C+ +++++ + M + +S D +Y
Sbjct: 373 SPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYN 432
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+L+ GL ++ K+ A +EEM +G P T+K++ L +K+
Sbjct: 433 ALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKK 477
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 148/349 (42%), Gaps = 43/349 (12%)
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP---- 263
V+ G D+A+ F M + +R + + L+ + + A + IP
Sbjct: 20 VKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRM---IPQGFS 76
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
L+ ++ I C+ + + +++M Q G+ PD+ ++ ++ RE
Sbjct: 77 LTPFTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKF 136
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS----------- 372
EM KG +P V+TYTI++ L KAKQ ++A++ + M + PD
Sbjct: 137 FDEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCD 196
Query: 373 ------------------------FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
++SL+ K+GR+ A I M K G P+++T
Sbjct: 197 GGKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLIT 256
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YN +++ C E A K ++KME +PD +Y LLK C+ R+ L+ M+
Sbjct: 257 YNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMW 316
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + D +Y +++ L +S A FEEM K + P T+ L
Sbjct: 317 EKGLC-DTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATL 364
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 107/219 (48%), Gaps = 4/219 (1%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KD 260
+++ L + R D A + M + G+ DT + + ++ L K + AY++F E KD
Sbjct: 295 LLKGLCKANRLDKAYKLMNTMWEKGL-CDTVSYNTVIGALCKSFATRKAYRLFEEMGQKD 353
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P F LI + A+ ++ M Q PD++ YT ++++C+ +
Sbjct: 354 VAP-DVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMA 412
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
++M E G P V++Y +++ L KA +++EA+ +YE+M+ C PD + +I
Sbjct: 413 QGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGG 472
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
L + + A ++++ M ++G + T+I + +R
Sbjct: 473 LLRKKELSLACQVWDQMMEKGYTLDKFLSETLIKAIRSR 511
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 35/178 (19%)
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
K I+EA++++++M DC + Y+ I +L R A + M QG
Sbjct: 21 KVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPF 80
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
TY+ IS+ C +LL+ M++ PD + N L +
Sbjct: 81 TYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAF----------------NIYLNLL 124
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
F+ ++ LELA FF+EM++KG P TY ++ ++L K +
Sbjct: 125 FRENL-------------------LELALKFFDEMVAKGREPDVVTYTIIVDRLCKAK 163
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 153 bits (386), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 160/323 (49%), Gaps = 2/323 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
++++R R G+ A ++ G D +VL+ K ++ A +V LE
Sbjct: 145 TSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEV-LERMS 203
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P +N ++ C + K+ +A + + Q+ PDV++YT IE C + +
Sbjct: 204 VAP-DVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQA 262
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
L EM++KGCKP V+TY ++++ + K +++EA+K M S C P+ ++ ++
Sbjct: 263 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRS 322
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ GR DA + DM ++G P+V+T+N +I+ C + A+ +L+KM + C P+
Sbjct: 323 MCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPN 382
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
+Y PLL C++K+M L M D TY +L+ L + GK++ A
Sbjct: 383 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILN 442
Query: 501 EMISKGIVPYHSTYKMLEEKLEK 523
++ SKG P TY + + L K
Sbjct: 443 QLSSKGCSPVLITYNTVIDGLTK 465
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 193/420 (45%), Gaps = 45/420 (10%)
Query: 146 GFFTWAKTQ--TGYMHTPEMYNTMVDVLGKS---KKFCLMWELVKEMDELNNGYVS--LA 198
GF KT+ T M E + DV+ + +C E+ K ++ L V+ +
Sbjct: 150 GFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVAPDVV 209
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +TI+R L G+ +A+E + D ++L++ + V A K+ E
Sbjct: 210 TYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEM 269
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVD--------------------------------- 283
K C P +N+LI+G CK ++D
Sbjct: 270 RKKGCKP-DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGR 328
Query: 284 --DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
DA++ + +M ++G SP VV++ I CR++ + D L++M + GC P+ ++Y
Sbjct: 329 WMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNP 388
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H + K+++ A++ E M S C PD Y++L+ L K G+V A EI + +G
Sbjct: 389 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKG 448
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P ++TYNT+I + E A++LL++M KPD TY+ LL+ R+ ++
Sbjct: 449 CSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAI 508
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ M + A TY +++ GL ++ + A F M+ KG P +TY +L E +
Sbjct: 509 KIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 157/295 (53%), Gaps = 5/295 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T + ++ + + GR D+A++ M YG + + ++++ ++ A ++
Sbjct: 278 VVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLS 337
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ K C P S FNILI+ C+ R + A +++M + G P+ +SY + +C+E
Sbjct: 338 DMLRKGCSP-SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQE 396
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
K + + L+ M +GC P ++TY ++ AL K +++ A+++ ++ S C P Y
Sbjct: 397 KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITY 456
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+++I L+K G+ + A E+ E+M+++G+ P+++TY+T++ + + A+K+ ME
Sbjct: 457 NTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEG 516
Query: 435 DLCKPDCETY-APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
KP TY A +L +C ++ + ++F L +M + TY L+ G+ +
Sbjct: 517 LSIKPSAVTYNAIMLGLCKAQQTSRAIDF-LAYMVEKGCKPTEATYTILIEGIAD 570
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 140/272 (51%), Gaps = 4/272 (1%)
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
NI + + ++++ K ++ M QG PDV++ T I +CR +K ++ ++
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
G P VITY +++ K+ +I++AL+V E+M PD Y++++ L +G++K+
Sbjct: 170 SGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKLKE 226
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A E+ + ++ P+V+TY +I + C S A+KLL +M + CKPD TY L+
Sbjct: 227 AMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 286
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C++ R+ L +M + T+ ++R + +G+ A +M+ KG P
Sbjct: 287 GICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSP 346
Query: 510 YHSTYKMLEEKLEKKR-LGNAKERINKLLAHA 540
T+ +L L +KR LG A + + K+ H
Sbjct: 347 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 378
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/428 (24%), Positives = 206/428 (48%), Gaps = 43/428 (10%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKS----KKFCLMWELV--------------- 184
A FF WA+ QTG+ + Y ++D+L ++ +C+M ++V
Sbjct: 64 ALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILD 123
Query: 185 --------KEMDE---------LNNGYV-SLATMSTIMRRLV-RGGRYDDAVEAFRGMKK 225
K M E ++ G + L + ++R L R D A E + M +
Sbjct: 124 LLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVE 183
Query: 226 YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRKVD 283
G+ + ++D+ K V+ A ++ L+ + C+P + +N+L++G + +++
Sbjct: 184 CGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLP-NDVTYNVLVNGLSHSGELE 242
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A++ ++EM + G +Y I YC + + +EM +G P+++TY +M
Sbjct: 243 QAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIM 302
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ L K ++++A K+ + M + + +PD Y++LI+ ++ G + +A +F +++ +G+V
Sbjct: 303 YGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLV 362
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P+V+TYNT+I C + + A++L +M + PD T+ L++ C+ + + L
Sbjct: 363 PSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKEL 422
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
M + D Y + + G ++ G A EEM+++G P TY + + L K
Sbjct: 423 FDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 482
Query: 524 KRLGNAKE 531
LGN KE
Sbjct: 483 --LGNLKE 488
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 148/328 (45%), Gaps = 1/328 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L + +T++ R G +A F ++ G+ + L+D L + ++ A ++
Sbjct: 330 LVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKD 389
Query: 257 EFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E P F IL+ G+CK + A++ EM +G PD +Y I +
Sbjct: 390 EMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLG 449
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
D K +EM +G P +ITY + + L K + EA ++ +KM + +PD Y+
Sbjct: 450 DPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYT 509
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
S+I AG ++ A +F +M +G+ P+V+TY +I S R + A+ +M E
Sbjct: 510 SIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEK 569
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
P+ TY L+ C+ ++M T M +S + TY L+ G + A
Sbjct: 570 GVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEA 629
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+++M+ + I P T+ L + L K
Sbjct: 630 LRLYKDMLDREIQPDSCTHSALLKHLNK 657
>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 624
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 178/356 (50%), Gaps = 4/356 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N M+++L + K+ + + M E+ ++ T +T++ G+++ A + F+ M
Sbjct: 220 FNIMINILCREGKWKKAKDFIGHM-EVYGVKPNVVTYNTVINGYCLRGKFEAASKIFKTM 278
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRK 281
K ++ D + + L K +E A V + + +P ++ +N LI G C
Sbjct: 279 KDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVP-NAVTYNALIDGCCNKGD 337
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A EM +G V +Y I EK + +D +KEM+EKG +P V+TY I
Sbjct: 338 LDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVTYNI 397
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + +AL ++++M + P Y+SLI + K R+ +A E F+ K+G
Sbjct: 398 QINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEG 457
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
++P+++ +N +I C + A +LL++M+ PD T+ L++ CR+++++
Sbjct: 458 MLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAK 517
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + + D +Y +L+ G + G ++ A F+EM+S G P TY L
Sbjct: 518 KLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNAL 573
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/363 (24%), Positives = 160/363 (44%), Gaps = 45/363 (12%)
Query: 179 LMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVL 238
+ W + +EM ++N S+ T + ++ L R G++ A + M+ YGV+ + + +
Sbjct: 200 MAWFVYEEMVKMNIK-SSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTV 258
Query: 239 MDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
++ E A K+F KD + +N I CK R++++A + ++ + G
Sbjct: 259 INGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGL 318
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
P+ V+Y I+ C + D K EM +G SV TY +++HAL K
Sbjct: 319 VPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEK------- 371
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
R+++A ++ ++M+++GV P+V+TYN I+ C
Sbjct: 372 ----------------------------RIEEAEDMIKEMREKGVEPDVVTYNIQINGYC 403
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
+ AL L +M E +P ETY L+ + ++ RM K + D
Sbjct: 404 RCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDII 463
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML------EEKLE--KKRLGNA 529
+ +L+ G +G ++ A +EM + +VP T+ L E K+E KK L
Sbjct: 464 MFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEM 523
Query: 530 KER 532
KER
Sbjct: 524 KER 526
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 146/294 (49%), Gaps = 6/294 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGR 212
++G + YN ++D G K L + +N G V S+ T + ++ L R
Sbjct: 315 ESGLVPNAVTYNALID--GCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKR 372
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFN 270
++A + + M++ GVE D ++ ++ + + + A +F E K+ P + + +
Sbjct: 373 IEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRP-TVETYT 431
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI + K ++ +A++ K+ ++G PD++ + I+ +C + + LKEM
Sbjct: 432 SLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNA 491
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P +T+ +M + +++ EA K+ ++MK PD Y++LI SK G +KDA
Sbjct: 492 KVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDA 551
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
E+F++M G P +LTYN +I E ++A +LL++M+ PD TY
Sbjct: 552 LEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTY 605
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 136/307 (44%), Gaps = 36/307 (11%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAM----------------------------------- 289
++ +F++L+ +C+ RK D+A + +
Sbjct: 146 TTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVY 205
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
+EM + +V++ I CRE ++K D + M+ G KP+V+TY V++
Sbjct: 206 EEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+ A K+++ MK + PD Y+S I L K R+++A+ + + + G+VPN +TY
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N +I C + + + A +M TY L+ +KR++ ++ M +
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE 385
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGN 528
V D TY + G G + A S F+EM+ K I P TY L + K+ R+
Sbjct: 386 KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSE 445
Query: 529 AKERINK 535
A+E+ K
Sbjct: 446 AEEKFKK 452
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 127/237 (53%), Gaps = 7/237 (2%)
Query: 304 YTCFIEHYCREKDFRKVDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+ + YC+ FRK D+ L+ M+E P T ++ L K +I A VYE
Sbjct: 150 FDLLLSAYCQ---FRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+M + ++ +I IL + G+ K A + M+ GV PNV+TYNT+I+ C R
Sbjct: 207 EMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRG 266
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+ E A K+ + M++ KPDC TY + C+++R++ + +L + ++ + +A TY
Sbjct: 267 KFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYN 326
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
+L+ G G L+ A ++ +EM+++GIV TY +L L +KR+ A++ I ++
Sbjct: 327 ALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEM 383
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 128/277 (46%), Gaps = 3/277 (1%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
DL AF + + G + + YN ++ L K+ +++KEM E + T
Sbjct: 337 DLDKAFAYRDEMMNR-GIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE-KGVEPDVVT 394
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-F 258
+ + R G A+ F M + + + L+D K N + A + F +
Sbjct: 395 YNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSI 454
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K+ + +FN LI G C +D A + +KEM PD V++ ++ YCRE+
Sbjct: 455 KEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVE 514
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ L EM+E+G KP I+Y ++ K + +AL+V+++M S P Y++LI
Sbjct: 515 EAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALI 574
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
SK G A E+ +M+ +G+ P+ TY +I +
Sbjct: 575 QGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEA 611
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG----GRYDD 215
T E Y +++DV GK + E K+ + G + M L+ G G D
Sbjct: 426 TVETYTSLIDVFGKRNRMSEAEEKFKK--SIKEGMLPDIIM---FNALIDGHCVNGNIDR 480
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIH 274
A + + M V D + LM + VE A K+ E K+ I +N LI
Sbjct: 481 AFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLIS 540
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+ K + DA + EM GF P +++Y I+ Y + + ++ L+EMQ KG P
Sbjct: 541 GYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITP 600
Query: 335 SVITYTIVMHAL 346
TY V+ A+
Sbjct: 601 DDSTYLYVIEAM 612
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 6/163 (3%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAF 220
M+N ++D + ++L+KEMD N V T +T+M+ R + ++A +
Sbjct: 464 MFNALIDGHCVNGNIDRAFQLLKEMD---NAKVVPDEVTFNTLMQGYCRERKVEEAKKLL 520
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKT 279
MK+ G++ D + + L+ K ++ A +VF E + +N LI G+ K
Sbjct: 521 DEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKI 580
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+ D A++ ++EM +G +PD +Y IE D + DD
Sbjct: 581 GEADHAEELLREMQSKGITPDDSTYLYVIEAMKTNDDLVENDD 623
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 186/394 (47%), Gaps = 5/394 (1%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
R+ ND A F KT+ G+ HT E Y M++ LG KF M +++ EM + + +
Sbjct: 15 RYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKM 74
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
IMR R G+ +AV F M Y E ++ + +M+ LV+ A+KV+
Sbjct: 75 LEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVY 134
Query: 256 LEFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ KD I + ++ I + +C T + A + + M QG + VSY I + +
Sbjct: 135 MRMKD-IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYK 193
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E + EM ++G P ++T+ ++H L K + E+ K++ K+ P+
Sbjct: 194 ENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFT 253
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
++ I L + G + +A + E + +G+ P+V++YNT+I C S+ A L KM
Sbjct: 254 FNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMV 313
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH-MFKNDVSMDAGTYASLVRGLIESGKL 492
+P+ TY ++ C+ M+ + +L MFK + D TY+SL+ GL G +
Sbjct: 314 NSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIP-DEFTYSSLINGLCNDGDM 372
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
A + F E + KG Y L + L K+ L
Sbjct: 373 NRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGL 406
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 159/318 (50%), Gaps = 6/318 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ +T+++ L + G A++ + M ++G D +++++ L K + A +
Sbjct: 390 SIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGIL 449
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ K CIP FN LI G+CK R +D A + + M G +PDV++Y + C+
Sbjct: 450 NDAIAKGCIP-DIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCK 508
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ V DT K M EKGC P++ITY I++ + K ++++EA++++++MK+ PD
Sbjct: 509 ARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVT 568
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVP-NVLTYNTMISSACARSEEENALKLLQKM 432
+LI L G + A E+F ++K+ + +N MI++ C + A KL KM
Sbjct: 569 LCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKM 628
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLN-FLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
C PD TY ++ C+ + + + FLL ++ K V T ++ L + +
Sbjct: 629 GGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVP-SFTTCGKVLNCLCVTHR 687
Query: 492 LELACSFFEEMISKGIVP 509
L A M+ GIVP
Sbjct: 688 LSEAVVIINLMVQNGIVP 705
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 162/322 (50%), Gaps = 12/322 (3%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS----VEHAYKV 254
T S+++ L G + A+ F +EK + +L +TLVKG S V A ++
Sbjct: 358 TYSSLINGLCNDGDMNRAMAVFYE----AMEKGFKHSIILYNTLVKGLSKQGLVLQALQL 413
Query: 255 FLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ + C P +N++++G CK + DA + + +G PD+ ++ I+ YC
Sbjct: 414 MKDMMEHGCSP-DIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYC 472
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
++++ K + L M G P VITY +++ L KA++++ + ++ M C P+
Sbjct: 473 KQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNII 532
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+ LI K +V +A E+F++MK +G+ P+++T T+I C+ E + A +L +
Sbjct: 533 TYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTI 592
Query: 433 EEDL-CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
E++ + ++ C K + + L M +D + D TY ++ ++G
Sbjct: 593 EKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGN 652
Query: 492 LELACSFFEEMISKGIVPYHST 513
++LA +F E ISKG+VP +T
Sbjct: 653 IDLAHTFLLENISKGLVPSFTT 674
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 149/316 (47%), Gaps = 3/316 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T + ++ L R G D+A + G+ D + + L+ K + + A + +
Sbjct: 250 NLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEA-ECY 308
Query: 256 LE--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
L + + +N +I+G+CK + +A K +++ +GF PD +Y+ I C
Sbjct: 309 LHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCN 368
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D + E EKG K S+I Y ++ L K + +AL++ + M C PD
Sbjct: 369 DGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWT 428
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ ++ L K G + DAN I D +G +P++ T+NT+I C + + A+++L M
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
PD TY LL C+ +++ + M + + + TY L+ + K+
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 494 LACSFFEEMISKGIVP 509
A F+EM ++G+ P
Sbjct: 549 EAMELFKEMKTRGLTP 564
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 168/387 (43%), Gaps = 6/387 (1%)
Query: 145 FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM 204
+G+F+ A M +Y + + K FC+ + LNN + +
Sbjct: 124 YGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVS 183
Query: 205 RRLVRGGRYDD-----AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-F 258
V G Y + A F M K G+ D + L+ L K +V+ + K+F +
Sbjct: 184 YCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVM 243
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K + + FNI I G C+ +D+A + ++ + +G +PDV+SY I +C+
Sbjct: 244 KRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLV 303
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + L +M G +P+ TY +++ KA + A K+ +PD YSSLI
Sbjct: 304 EAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLI 363
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L G + A +F + ++G +++ YNT++ + AL+L++ M E C
Sbjct: 364 NGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCS 423
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PD TY ++ C+ + N +L D T+ +L+ G + ++ A
Sbjct: 424 PDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEI 483
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKR 525
+ M+S GI P TY L L K R
Sbjct: 484 LDTMLSHGITPDVITYNTLLNGLCKAR 510
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/351 (24%), Positives = 166/351 (47%), Gaps = 9/351 (2%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T + ++ L + G ++ + F + K GV + ++ + L + +++ A ++ L
Sbjct: 216 ILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARL-L 274
Query: 257 EFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E L+ + +N LI G+CK K+ +A+ + +M G P+ +Y I +C+
Sbjct: 275 ESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKA 334
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ D L++ KG P TY+ +++ L +N A+ V+ + Y
Sbjct: 335 GMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILY 394
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++L+ LSK G V A ++ +DM + G P++ TYN +++ C +A +L
Sbjct: 395 NTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIA 454
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C PD T+ L+ C+++ M +L M + ++ D TY +L+ GL ++ KL+
Sbjct: 455 KGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDN 514
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKT 545
F+ M+ KG P TY +L E K R ++++ + KE KT
Sbjct: 515 VVDTFKAMLEKGCTPNIITYNILIESFCKDR------KVSEAMELFKEMKT 559
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 141/338 (41%), Gaps = 39/338 (11%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
D+ A F + + G+ H+ +YNT+V L K +L+K+M E + + T
Sbjct: 371 DMNRAMAVF-YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMME-HGCSPDIWT 428
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEF 258
+ ++ L + G DA G D + L+D K +++ A ++
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
I +N L++G CK RK+D+ K M ++G +P++++Y IE +C+++
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 319 KVDDTLKEMQEKGCKPSVIT------------------------------------YTIV 342
+ + KEM+ +G P ++T + I+
Sbjct: 549 EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIM 608
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++A ++ A K++ KM DC PD Y +I K G + A+ + +G+
Sbjct: 609 INAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGL 668
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
VP+ T +++ C A+ ++ M ++ P+
Sbjct: 669 VPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE 706
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 109/264 (41%), Gaps = 44/264 (16%)
Query: 274 HGWCKTRKVDDAQKAMKEMFQQ-----GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
H R +D A+K MF Q GF + +Y C IE F ++D L EM+
Sbjct: 9 HVAAVIRYQNDPLNALK-MFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMR 67
Query: 329 EK-GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+ K Y +M G+ ++ EA+ V+E+M DC P Y++++ IL + G
Sbjct: 68 KNVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYF 127
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A++++ MK G+ P+V T+ + S C AL+LL M C+
Sbjct: 128 SQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCE--------- 178
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+A +Y +++ G + A F+EM+ +GI
Sbjct: 179 --------------------------FNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGI 212
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKE 531
P T+ L L KK GN +E
Sbjct: 213 CPDILTFNKLIHVLCKK--GNVQE 234
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 117/256 (45%), Gaps = 29/256 (11%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
TP++ YNT+++ L K++K + + K M L G ++ T + ++ + + +A
Sbjct: 493 TPDVITYNTLLNGLCKARKLDNVVDTFKAM--LEKGCTPNIITYNILIESFCKDRKVSEA 550
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL----EFKDCIPLSSQIFNIL 272
+E F+ MK G+ D L L+ L ++ AY++F+ E+K S+ IFNI+
Sbjct: 551 MELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYK--FSYSTAIFNIM 608
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I+ +C V A+K +M +PD +Y I+ YC+ + L E KG
Sbjct: 609 INAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGL 668
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
PS T V++ L +++EA+ + M + +P+ + N
Sbjct: 669 VPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPE------------------EVNS 710
Query: 393 IFEDMKKQGVVPNVLT 408
IFE KK+ P ++
Sbjct: 711 IFEADKKEVAAPKIVV 726
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 175/379 (46%), Gaps = 13/379 (3%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N ++ L K+K++ + L K+ E N L T+S ++ A F
Sbjct: 60 LFNNILSSLVKNKRYPTVISLFKQF-EPNGITPDLCTLSILINCFCHQAHITLAFSVFAN 118
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI-----PLSSQIFNILIHGWC 277
+ K G D ++ ++TL+KG K L F D + L + LI+G C
Sbjct: 119 ILKRGFHPD----AITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLC 174
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K + + ++++ PDVV Y I C+ K D EM KG P V+
Sbjct: 175 KAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 234
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR---VKDANEIF 394
TYT ++H ++ EA + +MK + PD +S LI L K G+ V +A +F
Sbjct: 235 TYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLF 294
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
E+MK + ++P+++TYN++I C E A+ LL++M+E +PD +Y LL C+
Sbjct: 295 EEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKG 354
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
R+++ H+ ++ Y ++ GL ++G A +M KG +P T+
Sbjct: 355 GRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITF 414
Query: 515 KMLEEKLEKKRLGNAKERI 533
+ + L +K + E+I
Sbjct: 415 RTIICALSEKDENDKAEKI 433
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 133/273 (48%), Gaps = 5/273 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+++ L K+ + + L++++ E ++ + +TI+ L + DA + + M
Sbjct: 166 YGTLINGLCKAGETKAVARLLRKL-EGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM 224
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRK- 281
G+ D + L+ ++ A+ + E K I F++LI K K
Sbjct: 225 IVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKK 284
Query: 282 --VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
VD+A +EM + PD+V+Y I+ C+ + LKEM+E G +P V +Y
Sbjct: 285 KMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSY 344
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
TI++ L K ++ A + ++ + C + Y+ +I L KAG +A ++ M+
Sbjct: 345 TILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEG 404
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
+G +PN +T+ T+I + + E + A K+L++M
Sbjct: 405 KGCMPNAITFRTIICALSEKDENDKAEKILREM 437
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 116/246 (47%), Gaps = 7/246 (2%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
MYNT+++ L K+K ++ EM + + T +T++ G+ +A
Sbjct: 200 MYNTIINSLCKNKLLGDACDVYSEMI-VKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNE 258
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNS---VEHAYKVFLEFK--DCIPLSSQIFNILIHGWC 277
MK + D SVL+D L K V+ A +F E K + IP +N LI G C
Sbjct: 259 MKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIP-DIVTYNSLIDGLC 317
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K ++ A +KEM + G PDV SYT ++ C+ + + + KGC +V
Sbjct: 318 KNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVW 377
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y ++++ L KA EA+ + KM+ C+P+ + ++I LS+ A +I +M
Sbjct: 378 PYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREM 437
Query: 398 KKQGVV 403
+G++
Sbjct: 438 IARGLL 443
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 124/284 (43%), Gaps = 6/284 (2%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P + +FN ++ K ++ K+ G +PD+ + + I +C +
Sbjct: 55 PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFS 114
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+ ++G P IT ++ L +I + L ++++ + D Y +LI L
Sbjct: 115 VFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLC 174
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
KAG K + ++ V P+V+ YNT+I+S C +A + +M PD
Sbjct: 175 KAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 234
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL---ACSFF 499
TY L+ C +MK LL M +++ D T++ L+ L + GK ++ A S F
Sbjct: 235 TYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLF 294
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
EEM K ++P TY L + L K + ER LL KE
Sbjct: 295 EEMKHKNMIPDIVTYNSLIDGLCKN---HHLERAIALLKEMKEH 335
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 187/424 (44%), Gaps = 55/424 (12%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
L+P FF+ +Q + +NT+ D L + M + S+
Sbjct: 22 LSPPLPFFS--SSQNNFHSKSLHFNTLDDALSSFNRLLHM-----------HPPPSIVDF 68
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ + + Y + M +GV + L++L+++ N V A+ V +
Sbjct: 69 AKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKI-- 126
Query: 261 CIPLSSQ----IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ L Q F LI G C K+ +A +M +GF P+VV+Y I C+ +
Sbjct: 127 -LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGN 185
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC--------- 367
L+ M++ C+P V+ YT ++ +L K +Q+ EA ++ +M
Sbjct: 186 TSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTS 245
Query: 368 --------------------------LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
LPD +S+++ L K G+V +A+EI + M ++G
Sbjct: 246 LVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRG 305
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V P+V+TY T++ C +SE + A+K+ M PD +Y L+ C+ ++
Sbjct: 306 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAM 365
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+L M + + D TY +L+ GL G+L+ A + F EM+++G +P TY +L + L
Sbjct: 366 YLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 425
Query: 522 EKKR 525
K R
Sbjct: 426 CKNR 429
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 187/412 (45%), Gaps = 40/412 (9%)
Query: 144 AFGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMS 201
F F AK + G+ P + T++ L K L +M ++ G+ ++ T
Sbjct: 117 GFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM--IDEGFQPNVVTYG 174
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF------ 255
T++ L + G A+ R M++ + D + ++D+L K V A+ +F
Sbjct: 175 TLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQ 234
Query: 256 -------------------LEFKDCIPLSSQ-----------IFNILIHGWCKTRKVDDA 285
E+K L +Q IF+ ++ CK KV +A
Sbjct: 235 GISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEA 294
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ + M Q+G PDVV+YT ++ +C + + + M KG P VI+YT +++
Sbjct: 295 HEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLING 354
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K +I++A+ ++E+M + +PDT Y++L++ L GR++DA +F +M +G +P+
Sbjct: 355 YCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPD 414
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
++TY+ ++ S C E A+ LL+ +E PD + Y ++ CR ++ L +
Sbjct: 415 LVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFS 474
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ + TY ++ GL + G L A F EM P TY +
Sbjct: 475 NLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTI 526
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/347 (23%), Positives = 156/347 (44%), Gaps = 4/347 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
+Y +++D L K ++ + L +M + G + T ++++ L +
Sbjct: 207 IYTSIIDSLCKDRQVTEAFNLFSQM--VGQGISPDIFTYTSLVHALCNLCEWKHVTTLLN 264
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTR 280
M + D S ++D L K V A+++ + + + + L+ G C
Sbjct: 265 QMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQS 324
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++D+A K M ++GF+PDV+SYT I YC+ K +EM K P TY
Sbjct: 325 EMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYN 384
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+M+ L ++ +A+ ++ +M + +PD YS L+ L K +++A + + ++
Sbjct: 385 TLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEAS 444
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ P++ YN +I C E E A L + P TY ++ C++ +
Sbjct: 445 NLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEA 504
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
N L M ND S D TY ++ RG +++ + A EEM+++G
Sbjct: 505 NKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 122/262 (46%), Gaps = 1/262 (0%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA + + P +V + + + K + V +M G P+V T I
Sbjct: 46 LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++ ++ A V K+ PD + +++LI L G++ +A +F+ M +G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PNV+TY T+I+ C A++LL+ ME+ C+PD Y ++ C+ +++
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + M +S D TY SLV L + + + +M++ I+P + + + L
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285
Query: 522 EKK-RLGNAKERINKLLAHAKE 542
K+ ++ A E ++ ++ E
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVE 307
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T +T+M L GR DA+ F M G D S+L+D+L K +E A + +
Sbjct: 382 TYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAI 441
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
E + P Q++NI+I G C+ +++ A+ + +G P V +Y I C+
Sbjct: 442 EASNLNP-DIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGL 500
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + EM C P TY + + + A+++ E+M + D+ F
Sbjct: 501 LNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADSCFL-- 558
Query: 377 LIFILSKAGR 386
++ +LS+ R
Sbjct: 559 MLSVLSEDDR 568
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/331 (29%), Positives = 160/331 (48%), Gaps = 7/331 (2%)
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSS 266
R GR DA GM V+ + + L+ TL + V A V + + C P
Sbjct: 147 RAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAP-DV 202
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+NIL+ CK R A + + M +G +P+ V+Y ++ C E D + L+
Sbjct: 203 VTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRN 262
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
+ GCKPS + Y V+ L A++ +A ++ +M ++C P+ + ++ +I+ L + G
Sbjct: 263 LPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGL 322
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
++ A ++ E M K G N++TYN +I+ C + + A+ LL KM+ CKPD TY
Sbjct: 323 LQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNT 382
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
LLK C + L+ +M +N D T+ +L+ L + G + A F++M KG
Sbjct: 383 LLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKG 442
Query: 507 IVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
P TY + L K +L A E N++
Sbjct: 443 CTPNSITYSTIISGLAKATKLDQALELFNEM 473
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 109/447 (24%), Positives = 202/447 (45%), Gaps = 30/447 (6%)
Query: 78 LNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRF 137
L R+S+ V H D+D +++ + PD +++N LV RR
Sbjct: 72 LGSDRRLSALV----HRGDLDAALRLVESSPRPPD----------AALANRLVRDLCRRG 117
Query: 138 -SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS 196
+D G A T Y + Y LG +++ +V M N Y
Sbjct: 118 RPDDAERVVGACGPAATVVAYGALTDGY-CRAGRLGDARR------VVGGMPVQPNAY-- 168
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV-- 254
T + ++ L G+ DA+ M G D ++L++ KG A ++
Sbjct: 169 --TYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELID 226
Query: 255 FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ + C P ++ +N+L+ G C VDDA + ++ + G P V+Y ++ C
Sbjct: 227 LMRAEGCTP-NNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSA 285
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + D+ + EM + C P+ T+ +V+++L + + +A+++ EKM C + Y
Sbjct: 286 ERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTY 345
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+++I L + V A + MK G P+++TYNT++ C+ ++ +A +L+ M +
Sbjct: 346 NAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQ 405
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+ C PD T+ L+ C+K M + M + ++ TY++++ GL ++ KL+
Sbjct: 406 NGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQ 465
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKL 521
A F EM KG P Y++L E L
Sbjct: 466 ALELFNEMGHKGFNP-DKIYQLLAECL 491
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 179/375 (47%), Gaps = 4/375 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ K + + EL+ M + T + +M + G DDA+E R +
Sbjct: 205 YNILLEATCKGRGYRQAMELIDLM-RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNL 263
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
+G + T + ++ L A ++ E ++ P + FN++I+ C+ +
Sbjct: 264 PSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLL 323
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A + +++M + G + ++V+Y I C +++ L +M+ GCKP ++TY +
Sbjct: 324 QQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTL 383
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L A Q +A ++ + M + CLPD +++LI L + G + DA E+F+ M +G
Sbjct: 384 LKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGC 443
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN +TY+T+IS ++ + AL+L +M PD + Y L + ++
Sbjct: 444 TPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQ 502
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
+ + + +S Y +++ GL +GK E A M+S G +P TY +L E L
Sbjct: 503 TVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLA 562
Query: 523 -KKRLGNAKERINKL 536
+ L A+E + KL
Sbjct: 563 YEGYLNEARELLIKL 577
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 155/333 (46%), Gaps = 14/333 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ L ++++ ELV EM N + AT + ++ L R G A++ M
Sbjct: 275 YNTVLKGLCSAERWGDADELVTEMLR-ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKM 333
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
K+G + + +++ L + +V+ A + + K C P +N L+ G C +
Sbjct: 334 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKP-DIVTYNTLLKGLCSAAQ 392
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
DA++ M M Q G PD V++ I C++ + K+M +KGC P+ ITY+
Sbjct: 393 WVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYST 452
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L KA ++++AL+++ +M PD Y L L+ +++A + ++ G
Sbjct: 453 IISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSG 511
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+ + YN ++ C + E A+ ++ M C PD TY L++ + +
Sbjct: 512 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEAR 571
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
LL + DV LV LI+S L L
Sbjct: 572 ELLIKLCSRDV---------LVNSLIKSEALLL 595
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 200/437 (45%), Gaps = 53/437 (12%)
Query: 144 AFGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA---- 198
F F +AK + GY T +NT+++ CL +L KE ++ ++L
Sbjct: 111 TFAFSIFAKILKLGYHPTTITFNTLIN------GICLNGKL-KEALHFHDHVIALGFHLD 163
Query: 199 --TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T++ L + G A++ + ++ V D ++++++L K +V AY+++
Sbjct: 164 QVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYS 223
Query: 257 EF------KDCIPLSSQI------------------------------FNILIHGWCKTR 280
E D + +S I F+IL+ CK
Sbjct: 224 EMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDG 283
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ A+ + M +QG PDVV+Y+ ++ YC + K M G P +Y
Sbjct: 284 NITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYN 343
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ LGK K ++EAL ++++M PDT Y+SLI L K GR+ A ++ ++M
Sbjct: 344 IMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNN 403
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ ++LTYN++I C + A+ L++K+++ +P TY L+ C+ R+K
Sbjct: 404 GIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNA 463
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+ + S++A TY ++ GL + G A +M + GI+P TY+ +
Sbjct: 464 QDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRA 523
Query: 521 LEKKRLGNAKERINKLL 537
L +K + E+ KLL
Sbjct: 524 LFRK---DENEKAEKLL 537
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/331 (24%), Positives = 154/331 (46%), Gaps = 3/331 (0%)
Query: 196 SLATMSTIMRRLVRGG--RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
S+ + I+ +V+ Y A+ ++ G+ ++L++ + A+
Sbjct: 56 SIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFS 115
Query: 254 VFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+F + K ++ FN LI+G C K+ +A + GF D VSY I C
Sbjct: 116 IFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLC 175
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ + R LK+++ K V+ Y I++++L K K +++A ++Y +M + PD
Sbjct: 176 KIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVV 235
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
++SLI G++K+A +F +M + + P+V T++ ++ + C A +L M
Sbjct: 236 TFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVM 295
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ PD TY+ L+ C + + + M + V+ A +Y ++ GL + +
Sbjct: 296 MKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMV 355
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ A S F+EM KGI P TY L + L K
Sbjct: 356 DEALSLFKEMCCKGIAPDTVTYNSLIDGLCK 386
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 140/317 (44%), Gaps = 5/317 (1%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL----EFKDCIPLSSQIF 269
++ V +F M + + ++ ++VK N+ + + L E K P + F
Sbjct: 39 NNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITP-TIVTF 97
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
NIL++ +C ++ A ++ + G+ P +++ I C ++ +
Sbjct: 98 NILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIA 157
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
G ++Y +++ L K + AL++ +K++ D Y+ +I L K V D
Sbjct: 158 LGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSD 217
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A +++ +M + + P+V+T+N++I C + + A L +M PD T++ L+
Sbjct: 218 AYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVD 277
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ + +L M K V D TY+SL+ G ++ A F M G+ P
Sbjct: 278 ALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAP 337
Query: 510 YHSTYKMLEEKLEKKRL 526
+ +Y ++ L K ++
Sbjct: 338 HAHSYNIMINGLGKIKM 354
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 96/195 (49%), Gaps = 5/195 (2%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNIL 272
D+A+ F+ M G+ DT + L+D L K + +A+++ E + IP +N L
Sbjct: 356 DEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSL 415
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I CK +D A +K++ QG P + +Y I+ C+ + D +++ KG
Sbjct: 416 IDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGY 475
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+ TY I+++ L K NEA + KM+++ +PD Y ++I L + KD NE
Sbjct: 476 SVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFR----KDENE 531
Query: 393 IFEDMKKQGVVPNVL 407
E + ++ ++ +L
Sbjct: 532 KAEKLLREMIIRGLL 546
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 100/396 (25%), Positives = 189/396 (47%), Gaps = 12/396 (3%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
F K+ G+ H + Y++++ L +++ F + L M +L N Y + +
Sbjct: 69 FLYAGKSHPGFTHNYDTYHSILFKLSRARAFDPVESL---MADLRNSYPPIKCGENLFID 125
Query: 207 LVR----GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
L+R GRY+ ++ F + +GV++ R+L+ L++ L++ + + +F K+
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAMFKNSKESF 185
Query: 263 PLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
++ IF N+L+ CK ++ A K + E+ G P++V+YT + Y D
Sbjct: 186 GITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMESA 245
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
L+EM ++G P TYT++M K + +EA V + M+ ++ P+ Y +I
Sbjct: 246 KRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRA 305
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K + +A +F++M ++ +P+ +I + C + + A L +KM ++ C PD
Sbjct: 306 LCKEKKSGEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPD 365
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
+ L+ C++ R+ L K + TY +L+ G+ E G+L A ++
Sbjct: 366 NALLSTLIHWLCKEGRVTEARKLFDEFEKGSIP-SLLTYNTLIAGMCEKGELTEAGRLWD 424
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
+M + P TY +L E L K GN KE + L
Sbjct: 425 DMYERKCKPNAFTYNVLIEGLSKN--GNVKEGVRVL 458
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 113/243 (46%), Gaps = 5/243 (2%)
Query: 190 LNNGYVSLATMSTI-MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
L+ G+ AT T+ M + GR+ +A M+K +E + V++ L K
Sbjct: 253 LDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 249 EHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
A +F E + +P SS + I C+ KVD+A ++M + PD +
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKV-IDALCEDHKVDEACGLWRKMLKNNCMPDNALLST 371
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I C+E + E EKG PS++TY ++ + + ++ EA ++++ M
Sbjct: 372 LIHWLCKEGRVTEARKLFDEF-EKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C P+ Y+ LI LSK G VK+ + E+M + G PN T+ + +EE+A+
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAM 490
Query: 427 KLL 429
K++
Sbjct: 491 KIV 493
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 113/242 (46%), Gaps = 9/242 (3%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRY 213
G+ Y ++D K +F E MD++ + + T ++R L + +
Sbjct: 256 GWYPDATTYTVLMDGYCKLGRFS---EAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKS 312
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNI 271
+A F M + D+ ++D L + + V+ A ++ + +C+P + + +
Sbjct: 313 GEARNMFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMP-DNALLST 371
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LIH CK +V +A+K E F++G P +++Y I C + + + +M E+
Sbjct: 372 LIHWLCKEGRVTEARKLFDE-FEKGSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERK 430
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
CKP+ TY +++ L K + E ++V E+M C P+ + + L L K G+ +DA
Sbjct: 431 CKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAM 490
Query: 392 EI 393
+I
Sbjct: 491 KI 492
>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g06920-like [Glycine max]
Length = 905
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 6/366 (1%)
Query: 160 TPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST-IMRRLVRGGRYDDA 216
TP+ + +++D LG+ K + L ++M L++G A + T ++R + GR +D
Sbjct: 478 TPDSVTFCSLIDGLGRHGKVNDAYMLYEKM--LDSGQTPNAVVYTSLIRNFFKCGRKEDG 535
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHG 275
+ ++ M G D L+ MD + K +E +F E K + + ++ILIHG
Sbjct: 536 HKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHG 595
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
K D K EM +QG D +Y I+ +C+ K L+EM+ KG +P+
Sbjct: 596 LVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPT 655
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+TY V+ L K +++EA ++E+ KS + YSSLI K GR+ +A I E
Sbjct: 656 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILE 715
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
++ ++G+ PN T+N ++ + E + AL Q M+ C P+ TY+ ++ C+ +
Sbjct: 716 ELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVR 775
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ M K + + TY +++ GL G + A FE S G +P + Y
Sbjct: 776 KFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYN 835
Query: 516 MLEEKL 521
+ E L
Sbjct: 836 AMIEGL 841
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 179/365 (49%), Gaps = 11/365 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++ LG+ K +++ M + +L + + ++ L + G + A++ M
Sbjct: 380 YNCILTCLGRKGKVEEALRILEAMKM--DAAPNLTSYNILIDMLCKAGELEAALKVQDSM 437
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL--EFKDCIPLSSQIFNILIHGWCKTRK 281
K+ G+ + +++++D L K ++ A +FL + K C P S F LI G + K
Sbjct: 438 KEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTP-DSVTFCSLIDGLGRHGK 496
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHY--C-REKDFRKVDDTLKEMQEKGCKPSVIT 338
V+DA ++M G +P+ V YT I ++ C R++D K+ KEM +GC P ++
Sbjct: 497 VNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKI---YKEMMHRGCSPDLML 553
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
M + KA +I + ++E++K+ PD YS LI L K G KD ++F +MK
Sbjct: 554 LNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMK 613
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+QG+ + YN +I C + A +LL++M+ +P TY ++ + R+
Sbjct: 614 EQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLD 673
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
L V ++ Y+SL+ G + G+++ A EE++ KG+ P T+ L
Sbjct: 674 EAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLL 733
Query: 519 EKLEK 523
+ L K
Sbjct: 734 DALVK 738
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 184/420 (43%), Gaps = 49/420 (11%)
Query: 105 SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGYMHTP- 161
++ + ++++E + G SN+ + + F S L AFG +T + P
Sbjct: 145 TRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVI---ETMRKFKFRPA 201
Query: 162 -EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEA 219
Y T++ L + + M L+++M E+ GY V++ +T++ R GR D A+
Sbjct: 202 YSAYTTLIGALSAAHEADPMLTLLRQMQEI--GYEVTVHLFTTLICVFAREGRVDAALSL 259
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWC 277
MK D +V +D K V+ A+K F E K +P F +I C
Sbjct: 260 LDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVP-DDVTFTSMIGVLC 318
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K +VD+A + +E+ P V +Y I Y F + L+ + KGC PSVI
Sbjct: 319 KAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVI 378
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y ++ LG+ ++ EAL++ E MK D P+ + Y+ LI +L KAG ++ A ++ + M
Sbjct: 379 AYNCILTCLGRKGKVEEALRILEAMKMD-AAPNLTSYNILIDMLCKAGELEAALKVQDSM 437
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
K+ G+ PN++T N MI C + A + ++ +C PD
Sbjct: 438 KEAGLFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPD----------------- 480
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ T+ SL+ GL GK+ A +E+M+ G P Y L
Sbjct: 481 ------------------SVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSL 522
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 178/382 (46%), Gaps = 6/382 (1%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
A+ FF K+Q G + + +M+ VL K+++ EL +E+D N + +T+
Sbjct: 291 AWKFFHELKSQ-GLVPDDVTFTSMIGVLCKAERVDEAVELFEELDS-NKSVPCVYAYNTM 348
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCI 262
+ G++++A K+ G A + ++ L + VE A ++ K D
Sbjct: 349 IMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKMDAA 408
Query: 263 P-LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
P L+S +NILI CK +++ A K M + G P++++ I+ C+ + +
Sbjct: 409 PNLTS--YNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEAC 466
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ K C P +T+ ++ LG+ ++N+A +YEKM P+ Y+SLI
Sbjct: 467 SIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNF 526
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K GR +D ++I+++M +G P+++ N + E E L ++++ PD
Sbjct: 527 FKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDV 586
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
+Y+ L+ + K L M + + +D Y ++ G +SGK+ A EE
Sbjct: 587 RSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEE 646
Query: 502 MISKGIVPYHSTYKMLEEKLEK 523
M +KG+ P TY + + L K
Sbjct: 647 MKTKGLQPTVVTYGSVIDGLAK 668
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 173/364 (47%), Gaps = 4/364 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++D+L K+ + ++ M E + ++ T++ ++ RL + R D+A F G+
Sbjct: 414 YNILIDMLCKAGELEAALKVQDSMKEAGL-FPNIITVNIMIDRLCKAQRLDEACSIFLGL 472
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRK 281
D+ L+D L + V AY ++ + D P ++ ++ LI + K +
Sbjct: 473 DHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTP-NAVVYTSLIRNFFKCGR 531
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D K KEM +G SPD++ +++ + + K +E++ +G P V +Y+I
Sbjct: 532 KEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSI 591
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H L K + K++ +MK DT Y+ +I K+G+V A ++ E+MK +G
Sbjct: 592 LIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKG 651
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P V+TY ++I + A L ++ + + Y+ L+ + R+
Sbjct: 652 LQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAY 711
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+L + + ++ + T+ L+ L+++ +++ A F+ M + P TY ++ L
Sbjct: 712 LILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGL 771
Query: 522 EKKR 525
K R
Sbjct: 772 CKVR 775
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 176/402 (43%), Gaps = 38/402 (9%)
Query: 129 LVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD 188
LV +RR D+ A +F W + +T +H+PE YN ++ ++ +++ + ++++EM
Sbjct: 101 LVVGVIRRL-KDVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMS 159
Query: 189 ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
G S T ++ V+ + +A M+K+ A + L+ L S
Sbjct: 160 MAGFG-PSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGAL----SA 214
Query: 249 EHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
H + D +++M + G+ V +T I
Sbjct: 215 AH------------------------------EADPMLTLLRQMQEIGYEVTVHLFTTLI 244
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+ RE L EM+ ++ Y + + GK +++ A K + ++KS +
Sbjct: 245 CVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLV 304
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
PD ++S+I +L KA RV +A E+FE++ VP V YNTMI + + A L
Sbjct: 305 PDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSL 364
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
L++ + C P Y +L RK +++ +L M K D + + +Y L+ L +
Sbjct: 365 LERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCK 423
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNA 529
+G+LE A + M G+ P T ++ ++L K +RL A
Sbjct: 424 AGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDEA 465
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/284 (23%), Positives = 135/284 (47%), Gaps = 36/284 (12%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
S ++ LV+GG D + F MK+ G+ DTRA ++++D K V AY++ E K
Sbjct: 590 SILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKT 649
Query: 261 ------------------------------------CIPLSSQIFNILIHGWCKTRKVDD 284
+ L+ +++ LI G+ K ++D+
Sbjct: 650 KGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDE 709
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A ++E+ Q+G +P+ ++ C ++ + ++ + + M+ C P+ +TY+I+++
Sbjct: 710 AYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVN 769
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
L K ++ N+A +++M+ P+T Y+++I L++ G V +A ++FE K G +P
Sbjct: 770 GLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIP 829
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+ YN MI ++ +A L ++ C+ +T LL
Sbjct: 830 DSACYNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLL 873
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 111/266 (41%), Gaps = 39/266 (14%)
Query: 137 FSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM--------- 187
FS D + F K Q ++ T YN ++D KS K ++L++EM
Sbjct: 601 FSKD---TYKLFYEMKEQGLHLDT-RAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTV 656
Query: 188 -------------DELNNGY------------VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
D L+ Y +++ S+++ + GR D+A
Sbjct: 657 VTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEE 716
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
+ + G+ +T + L+D LVK ++ A F K+ P + ++I+++G CK RK
Sbjct: 717 LMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRK 776
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ A +EM +QG P+ ++YT I R + + D + + G P Y
Sbjct: 777 FNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNA 836
Query: 342 VMHALGKAKQINEALKVYEKMKSDDC 367
++ L A + +A ++E+ + C
Sbjct: 837 MIEGLSNANKAMDAYILFEETRLKGC 862
>gi|124360736|gb|ABN08713.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 479
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/439 (25%), Positives = 197/439 (44%), Gaps = 48/439 (10%)
Query: 125 VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ--TGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
++NSLVEQ ++ D+ F A + G+ H + M+ L +F
Sbjct: 13 ITNSLVEQLIKA-EKDINKTLVMFDSATEEYSNGFRHDHNTFGAMIHRLVSVNQFRPAEG 71
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
+++ M + + V+ TI R R R DA+ F M+ + V+ ++ + D L
Sbjct: 72 MLERMKQ-EDCEVTEDVFLTICRGYGRVHRPLDAIRVFHKMEDFQVKPTQKSYLTVFDIL 130
Query: 243 VKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK-VDDAQKAMKEMFQQGFSPD 300
V+ N V+ A + E ++ IP + NILI CK + V+ A + +EM +G PD
Sbjct: 131 VEENHVKRAIGFYKEMREKGIPPTVVSLNILIKALCKNEETVESAFRLFREMPNRGCQPD 190
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+Y I C+ + + L EM+EKG PSV++YT ++H L ++ ++EA+++ E
Sbjct: 191 SYTYGTLINGLCKLGKISQAKELLDEMEEKGLSPSVVSYTSLIHGLCQSNNLDEAIELLE 250
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+M + P+ YSSL+ L K+G A E+ E M ++ ++PN++TY+T+I+ C
Sbjct: 251 EMIINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLPNMVTYSTLINGLCKEG 310
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLK-MCCRKKRMKVLNF----------------- 462
+ A+++L +M KPD Y ++ +C + NF
Sbjct: 311 KHREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWT 370
Query: 463 ------------------------LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
L M +S++ GT+ LV+ + G L A
Sbjct: 371 FHVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARI 430
Query: 499 FEEMISKGIVPYHSTYKML 517
EEMI G +P + +L
Sbjct: 431 LEEMILDGCIPDEGMWNVL 449
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 116/284 (40%), Gaps = 46/284 (16%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+++ L K K EL+ EM+E S+ + ++++ L + D+A+E M
Sbjct: 194 YGTLINGLCKLGKISQAKELLDEMEE-KGLSPSVVSYTSLIHGLCQSNNLDEAIELLEEM 252
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G+E + S LMD L K A ++ + + +P + ++ LI+G CK K
Sbjct: 253 IINGIEPNVFTYSSLMDGLCKSGHSSQAMELLEVMVRRRLLP-NMVTYSTLINGLCKEGK 311
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT- 340
+A + + M QG PD Y I C ++++ + + EM G P+ ++T
Sbjct: 312 HREAVEILDRMRLQGLKPDAGMYGRIISGLCAACNYQEAANFIDEMALGGISPNRASWTF 371
Query: 341 -IVMHAL----------------------------------------GKAKQINEALKVY 359
+ MH + K +N+A ++
Sbjct: 372 HVKMHNMVVQGLCNNVDPTRAFQLYLSMRTRGISVEIGTFDCLVKCFCKRGDLNKAARIL 431
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
E+M D C+PD ++ L+ L +V++ E+ KQ V
Sbjct: 432 EEMILDGCIPDEGMWNVLMCGLWDRKKVRETTELLVAELKQKFV 475
>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 628
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 182/416 (43%), Gaps = 40/416 (9%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF WA + Y H Y ++ L +++ MW++++EM V+ +S I+R
Sbjct: 105 FFRWAARKRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRM 164
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---CIP 263
L AV F +K + A + ++ L+ E ++++ E + C P
Sbjct: 165 LGNAKMISKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFP 224
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ ++ LI +CK + D A + EM G P YT + + +
Sbjct: 225 -DTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGL 283
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+EM+ + C+P V TYT ++ LGKA +++EA + +M+ + C PDT +++I L K
Sbjct: 284 FEEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGK 343
Query: 384 AGRVKDANEIFEDM------------------------------------KKQGVVPNVL 407
AGR+ DA ++FE+M K G+ P+
Sbjct: 344 AGRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPF 403
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
TY+ +I C + E A+ LL++M+E P Y L+ + KR + N L +
Sbjct: 404 TYSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQEL 463
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+N S A YA +++ L ++G+L+ A F+EM G P Y L L +
Sbjct: 464 KENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLAR 519
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/328 (27%), Positives = 165/328 (50%), Gaps = 4/328 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++R L + GR D+A F M++ G DT ++ +++ L K ++ A K+F E
Sbjct: 298 TYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEM 357
Query: 259 KD--CIPLSSQIFNILIHGWCKTR-KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ CIP S +N +I +++ +V + + M G SP +Y+ I+ +C+
Sbjct: 358 ETLRCIP-SVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTN 416
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
K L+EM EKG P Y ++ ALGKAK+ + A ++++++K + Y+
Sbjct: 417 RTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYA 476
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I L KAGR+ DA ++F++M + G PNV YN ++S + AL +++M++
Sbjct: 477 VMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDH 536
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C PD +Y +L + +L +M ++ + DA +Y +++ L +G E A
Sbjct: 537 GCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEA 596
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+EM + G TY + E + K
Sbjct: 597 AKLMKEMNAIGFDYDLITYSSILEAIGK 624
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 168/370 (45%), Gaps = 10/370 (2%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
T YN+M+ +L ++ + EL EM + T S ++ + GR D A+
Sbjct: 189 TAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKLGRQDSAIWL 248
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWC 277
MK G++ + ++LM L K ++V A +F E + C P + LI G
Sbjct: 249 LNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRP-DVFTYTELIRGLG 307
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKP 334
K ++D+A EM ++G PD V I + ++DD +K EM+ C P
Sbjct: 308 KAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAG---RLDDAIKLFEEMETLRCIP 364
Query: 335 SVITYTIVMHALGKAK-QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
SV+TY ++ AL ++K +++E +E+MK P YS LI K R + A +
Sbjct: 365 SVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMML 424
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
E+M ++G P Y ++I + + A +L Q+++E+ YA ++K +
Sbjct: 425 LEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMIKHLGK 484
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
R+ L M + + + Y +L+ GL +G L+ A + M G +P ++
Sbjct: 485 AGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIPDINS 544
Query: 514 YKMLEEKLEK 523
Y ++ L K
Sbjct: 545 YNIILNALAK 554
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 96/200 (48%), Gaps = 4/200 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ P Y +++D LGK+K++ L EL +E+ E N G S + +++ L + GR
Sbjct: 430 EKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKE-NCGSSSARVYAVMIKHLGKAGRL 488
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNI 271
DDAV+ F M + G + A + LM L + ++ A +D CIP +NI
Sbjct: 489 DDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCIP-DINSYNI 547
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+++ KT D A + M Q PD VSY + F + +KEM G
Sbjct: 548 ILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKLMKEMNAIG 607
Query: 332 CKPSVITYTIVMHALGKAKQ 351
+ITY+ ++ A+GK Q
Sbjct: 608 FDYDLITYSSILEAIGKVDQ 627
>gi|356536414|ref|XP_003536733.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 553
Score = 152 bits (385), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 196/402 (48%), Gaps = 13/402 (3%)
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLV 208
W +TQ + + ++ GK F +++ M++ NGYV ++ + + +M
Sbjct: 124 WLRTQNWWDFGKMDFFMLITAYGKLGDFNGAEKVLGLMNK--NGYVPNVVSQTALMEAYG 181
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPL-- 264
+GGRY++A FR M+K+G E +++ T V+GN A ++F L + PL
Sbjct: 182 KGGRYNNAEAIFRRMQKWGPEPSAFTYQIILKTFVQGNKYREAEELFDNLLNDENSPLKP 241
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
++FN++I+ + K + A+K M ++G V+Y + E D+++V +
Sbjct: 242 DQKMFNMMIYMYKKAGSYEKARKTFALMAERGIQQTTVTYNSLMSF---ETDYKEVSNIY 298
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+MQ +P V++Y +++ A GKA++ EAL V+E+M P Y+ L+ S +
Sbjct: 299 DQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGVRPTRKAYNILLDAFSIS 358
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G V+ A +F+ M++ P++ +Y TM+S+ + E A K +++ +D +P+ TY
Sbjct: 359 GMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYVNADDMEGAEKFFKRLIQDDFEPNVVTY 418
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+K + ++++ M + + +++ +SG + A +F+EM S
Sbjct: 419 GTLIKGYAKINDLEMVMKKYEEMLVRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEMES 478
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
GI P +L L + +E N+L+ H E +
Sbjct: 479 NGIPPDQKAKNVL---LSLPKTDEEREEANELVGHFSENNSL 517
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 177/366 (48%), Gaps = 4/366 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFR 221
+YNT++D L K L EMD N G ++ T ++++R L GR+ DA
Sbjct: 258 IYNTIIDALCNYKNVNDALNLFTEMD--NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTR 280
M + + + S L+D VK + A K++ E K I ++ LI+G+C
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++D+A+ + M + P+VV+Y I+ +C+ K + + +EM ++G + +TYT
Sbjct: 376 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYT 435
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++H +A++ + A V+++M SD LPD YS L+ L G+V+ A +FE +++
Sbjct: 436 TLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRS 495
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ P++ TYN MI C + E+ L + KP+ TY ++ CRK +
Sbjct: 496 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEA 555
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+ L M + D+GTY +L+R + G + EM S V ST ++
Sbjct: 556 DALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVTNM 615
Query: 521 LEKKRL 526
L RL
Sbjct: 616 LHDGRL 621
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/369 (24%), Positives = 178/369 (48%), Gaps = 6/369 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G H Y+ +++ + + L ++ +M +L GY + T+++++ G R
Sbjct: 111 GISHNLYTYSILINCFCRRSQLSLALAVLAKMMKL--GYEPDIVTLNSLLNGFCHGNRIS 168
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
DAV M + G + D+ + L+ L + N A + + K C P + I+
Sbjct: 169 DAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQP-DLVTYGIV 227
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
++G CK +D A +K+M Q P VV Y I+ C K+ + EM KG
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGI 287
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+P+V+TY ++ L + ++A ++ M P+ +S+LI K G++ +A +
Sbjct: 288 RPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 347
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
++++M K+ + P++ TY+++I+ C + A + + M C P+ TY L+K C
Sbjct: 348 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFC 407
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ KR+ L M + + + TY +L+ G ++ + + A F++M+S G++P
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIM 467
Query: 513 TYKMLEEKL 521
TY +L + L
Sbjct: 468 TYSILLDGL 476
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 168/363 (46%), Gaps = 2/363 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
++ ++ + K KF L+ L ++M L + +L T S ++ R + A+ M
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISH-NLYTYSILINCFCRRSQLSLALAVLAKM 142
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKV 282
K G E D L+ L++ GN + A + + + S FN LIHG + +
Sbjct: 143 MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRA 202
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A + M +G PD+V+Y + C+ D LK+M++ +P V+ Y +
Sbjct: 203 SEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ AL K +N+AL ++ +M + P+ Y+SLI L GR DA+ + DM ++ +
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PNV+T++ +I + + A KL +M + PD TY+ L+ C R+
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
+ M D + TY +L++G ++ +++ F EM +G+V TY L
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Query: 523 KKR 525
+ R
Sbjct: 443 QAR 445
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 154/330 (46%), Gaps = 11/330 (3%)
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+ S+ S ++ + + ++D + M+ G+ + S+L++ + + + A
Sbjct: 78 FPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALA 137
Query: 254 VFLEF------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
V + D + L+S L++G+C ++ DA + +M + G+ PD ++
Sbjct: 138 VLAKMMKLGYEPDIVTLNS-----LLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTL 192
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I R + + M KGC+P ++TY IV++ L K I+ AL + +KM+
Sbjct: 193 IHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKI 252
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P Y+++I L V DA +F +M +G+ PNV+TYN++I C +A +
Sbjct: 253 EPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASR 312
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
LL M E P+ T++ L+ ++ ++ L M K + D TY+SL+ G
Sbjct: 313 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 372
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKML 517
+L+ A FE MISK P TY L
Sbjct: 373 MHDRLDEAKHMFELMISKDCFPNVVTYNTL 402
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 135/299 (45%), Gaps = 4/299 (1%)
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDA 285
GV D R +S+ + ++ A +F + P S + F+ L+ K K D
Sbjct: 44 GVRYDYRKISI---NRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLV 100
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
++M G S ++ +Y+ I +CR L +M + G +P ++T +++
Sbjct: 101 ISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNG 160
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
+I++A+ + +M PD+ +++LI L + R +A + + M +G P+
Sbjct: 161 FCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD 220
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
++TY +++ C R + + AL LL+KME+ +P Y ++ C K + L T
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFT 280
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M + + TY SL+R L G+ A +MI + I P T+ L + K+
Sbjct: 281 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 339
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 145/324 (44%), Gaps = 33/324 (10%)
Query: 77 RLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRR 136
R ++ SR+ S ++ +V S ++ + K+VEA K L ++ ++R
Sbjct: 306 RWSDASRLLSDMIERKINPNVVTFSALID-AFVKEGKLVEAEK---------LYDEMIKR 355
Query: 137 FSNDLTPAFGFFTWAKTQTGY-MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
+ P FT++ G+ MH D L ++K M+EL+ D N
Sbjct: 356 ---SIDP--DIFTYSSLINGFCMH---------DRLDEAKH---MFELMISKDCFPN--- 395
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ T +T+++ + R D+ +E FR M + G+ +T + L+ + ++A VF
Sbjct: 396 -VVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF 454
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ D + ++IL+ G C KV+ A + + + PD+ +Y IE C+
Sbjct: 455 KQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKA 514
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
D + KG KP+V+TYT +M + EA ++ +MK + LPD+ Y
Sbjct: 515 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTY 574
Query: 375 SSLIFILSKAGRVKDANEIFEDMK 398
++LI + G + E+ +M+
Sbjct: 575 NTLIRAHLRDGDKAASAELIREMR 598
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 88/378 (23%), Positives = 185/378 (48%), Gaps = 2/378 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ L K + +L++ +D N ++ STI+ + + +DA + + M
Sbjct: 165 YGTLIHGLCKVGETRAALDLLRRVDG-NLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEM 223
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
G+ + S L+ ++ A +F + + I FNIL+ G+CK K+
Sbjct: 224 VSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKM 283
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ + M +QG P+VV+Y ++ YC K+ K L M ++G P + +Y I+
Sbjct: 284 KEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNIL 343
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ K K+++EA+ ++++M +PD Y+SLI L K G++ A ++ ++M +GV
Sbjct: 344 IDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGV 403
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+++TY++++ + C + + A+ LL K+++ +P+ TY L+ C+ R++ +
Sbjct: 404 PPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHN 463
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
+ + ++ TY ++ G G + A + +M +P TY+++ L
Sbjct: 464 IFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLF 523
Query: 523 KKRLGNAKERINKLLAHA 540
K + E++ +++
Sbjct: 524 DKDENDKAEKLREMITRG 541
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 119/255 (46%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
F LI G C ++ A + GF D V Y I C+ + R D L+ +
Sbjct: 130 FTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVD 189
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+P+V+ Y+ ++ + K K +N+A +Y +M S P+ YS+LI G++K
Sbjct: 190 GNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLK 249
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
DA ++F M + + P+V T+N ++ C + + + M + KP+ TY L+
Sbjct: 250 DAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLM 309
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C K + +L M + V+ D +Y L+ G + K++ A + F+EM K I+
Sbjct: 310 DGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHII 369
Query: 509 PYHSTYKMLEEKLEK 523
P TY L + L K
Sbjct: 370 PDVVTYNSLIDGLCK 384
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 145/346 (41%), Gaps = 74/346 (21%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
MY+T++D + K K ++L EM ++ G ++ T S ++ G+ DA++ F
Sbjct: 199 MYSTIIDGMCKDKHVNDAFDLYSEM--VSKGISPNVVTYSALISGFFTVGQLKDAIDLFN 256
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSS-------------- 266
M ++ D ++L+D K ++ VF + K I +
Sbjct: 257 KMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVK 316
Query: 267 ---------------------QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
Q +NILI G+CK +KVD+A KEM + PDVV+Y
Sbjct: 317 EVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYN 376
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I+ C+ + EM ++G P +ITY+ ++ AL K Q+++A+ + K+K
Sbjct: 377 SLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQ 436
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFED----------------------------- 396
P+ Y+ LI L K GR++DA+ IFED
Sbjct: 437 GIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEA 496
Query: 397 ------MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
MK +P+ +TY +I S + E + A KL + + L
Sbjct: 497 LALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMITRGL 542
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 2/212 (0%)
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
+ +Q G + YN ++D K KK L KEM + + T ++++ L +
Sbjct: 326 YTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHH-KHIIPDVVTYNSLIDGLCK 384
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQI 268
G+ A++ M GV D S ++D L K + V+ A + + KD I +
Sbjct: 385 LGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYT 444
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ ILI G CK +++DA +++ +G++ V +YT I +C + F + L +M+
Sbjct: 445 YTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMK 504
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+ C P +TY I++ +L + ++A K+ E
Sbjct: 505 DNSCIPDAVTYEIIIRSLFDKDENDKAEKLRE 536
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 114/274 (41%), Gaps = 21/274 (7%)
Query: 262 IPLSSQIFNILIHGWCKT-----RKVDDAQKAMKEMFQQGFSPDVVSYTCFI------EH 310
IP SS N + + T V DA + +Q +P + + + +H
Sbjct: 32 IPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKH 91
Query: 311 Y------CREKDFRKVDDTLKEMQEK----GCKPSVITYTIVMHALGKAKQINEALKVYE 360
Y ++ +F ++ L Q G P+ IT+T ++ L QI++AL ++
Sbjct: 92 YHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHD 151
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+ + D Y +LI L K G + A ++ + V PNV+ Y+T+I C
Sbjct: 152 NVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDK 211
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+A L +M P+ TY+ L+ ++K L M ++ D T+
Sbjct: 212 HVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFN 271
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
LV G + GK++ + F M+ +GI P TY
Sbjct: 272 ILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTY 305
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 113/443 (25%), Positives = 204/443 (46%), Gaps = 59/443 (13%)
Query: 137 FSNDLTP--AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE----LVKEMDEL 190
FS DL P A F W Y H+ Y +++ +L + ++++ ++K D +
Sbjct: 97 FSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSV 156
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
+ L + R++ + R++ + G + L+++L + V+
Sbjct: 157 GDALYVL----DLCRKMNKDERFELKYKLIIG-----------CYNTLLNSLARFGLVDE 201
Query: 251 AYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+V++E +D + + +N +++G+CK V++A + + ++ + G PD +YT I
Sbjct: 202 MKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIM 261
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
YC+ KD EM KGC+ + + YT ++H L A++I+EA+ ++ KMK D+C P
Sbjct: 262 GYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP 321
Query: 370 DTSFYSSLIFILSKAGR-------VKD----------------------------ANEIF 394
Y+ LI L + R VK+ A E+
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
M ++G++PNV+TYN +I+ C R E+A+ +++ ME P+ TY L+K C+
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS 441
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
K + +L M + V D TY SL+ G SG + A M +G+VP TY
Sbjct: 442 NVHKAMG-VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTY 500
Query: 515 -KMLEEKLEKKRLGNAKERINKL 536
M++ + KR+ A + + L
Sbjct: 501 TSMIDSLCKSKRVEEACDLFDSL 523
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 182/379 (48%), Gaps = 5/379 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGR 212
+TG Y ++D L KF EL+ +M L G + ++ T + ++ + G
Sbjct: 351 ETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQM--LEKGLMPNVITYNALINGYCKRGM 408
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNI 271
+DAV+ M+ + +TR + L+ K N V A V + + L + +N
Sbjct: 409 IEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNS 467
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G C++ D A + + M +G PD +YT I+ C+ K + D +++KG
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P+V+ YT ++ KA +++EA + EKM S +CLP++ +++LI L G++K+A
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ E M K G+ P V T +I + ++A Q+M KPD TY ++
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
CR+ R+ ++ M +N VS D TY+SL++G + G+ A + M G P
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 512 STYKMLEEKLEKKRLGNAK 530
T+ L + L + + G K
Sbjct: 708 HTFLSLIKHLLEMKYGKQK 726
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/391 (25%), Positives = 178/391 (45%), Gaps = 28/391 (7%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN+++D +S F + L+ M++ G V T ++++ L + R ++A + F
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMND--RGLVPDQWTYTSMIDSLCKSKRVEEACDLFDS 522
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
+++ GV + + L+D K V+ A+ + + K+C+P +S FN LIHG C
Sbjct: 523 LEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLP-NSLTFNALIHGLCADG 581
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+ +A ++M + G P V + T I ++ DF ++M G KP TYT
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYT 641
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+ + ++ +A + KM+ + PD YSSLI G+ A ++ + M+
Sbjct: 642 TFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDT 701
Query: 401 GVVPNVLTYNTMI---------------SSACARS---EEENALKLLQKMEEDLCKPDCE 442
G P+ T+ ++I CA S E + ++LL+KM E P+ +
Sbjct: 702 GCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAK 761
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKND-VSMDAGTYASLVRGLIESGKLELACSFFEE 501
+Y L+ C ++V + HM +N+ +S + +L+ + K A ++
Sbjct: 762 SYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDD 821
Query: 502 MISKGIVPYHSTYKMLEEKLEKKRLGNAKER 532
MI G +P + K+L L KK KER
Sbjct: 822 MICVGHLPQLESCKVLICGLYKK---GEKER 849
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 106/271 (39%), Gaps = 20/271 (7%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T ++ R GR DA + M++ GV D S L+ A+ V
Sbjct: 639 TYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRM 698
Query: 259 KD--CIPLSSQIFNILIH-----------------GWCKTRKVDDAQKAMKEMFQQGFSP 299
+D C P +++ H + D + +++M + +P
Sbjct: 699 RDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTP 758
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQE-KGCKPSVITYTIVMHALGKAKQINEALKV 358
+ SY I C + R + MQ +G PS + + ++ K K+ NEA KV
Sbjct: 759 NAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKV 818
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+ M LP LI L K G + +F+++ + G + L + +I
Sbjct: 819 VDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGK 878
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
+ E +L ME++ CK +TY+ L++
Sbjct: 879 QGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 172/367 (46%), Gaps = 38/367 (10%)
Query: 201 STIMRRLVRGGRYDDAVEAF-RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-F 258
+ ++ +V+ G+Y AV + + M+ G+ D LS+L+D V+ A+ VF +
Sbjct: 98 TKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMI 157
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K + + FN LI+G CK K A + + G P V +YT I C+ +
Sbjct: 158 KLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETT 217
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL- 377
K+M+E GC+P+V+TY I++ +L K K +NEAL ++ MK+ PD Y+SL
Sbjct: 218 AAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLI 277
Query: 378 ---------------------------IFILS-------KAGRVKDANEIFEDMKKQGVV 403
IF + K G+V +A +F+ M + GV
Sbjct: 278 QGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVE 337
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P+V+TY++++ R E A KL M CKPD +Y L+K C+ KR+ L
Sbjct: 338 PDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQL 397
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
M ++ D Y +L+ GL + G+L A F+ M S G +P TY ML + K
Sbjct: 398 FNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCK 457
Query: 524 KR-LGNA 529
+ LG A
Sbjct: 458 EGYLGKA 464
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 100/369 (27%), Positives = 175/369 (47%), Gaps = 12/369 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT+++ L K KF E + E + ++ T +TI+ L + G A F+ M
Sbjct: 168 FNTLINGLCKVGKFAQAVEFFDDF-EASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKM 226
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NILIHGWCKTRK 281
++ G + + ++L+D+L K V A +F + +S IF N LI G C R+
Sbjct: 227 EEAGCQPNVVTYNILIDSLCKDKLVNEALDIF-SYMKAKRISPDIFTYNSLIQGLCNFRR 285
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+A + EM P++ ++ ++ C+E + K M E G +P V+TY+
Sbjct: 286 WKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSS 345
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+M+ +I EA K+++ M + C PD Y+ LI KA R+ +A ++F +M QG
Sbjct: 346 LMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG 405
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK----KRM 457
+ P+ + YNT+I C A L + M + PD TY+ LL C++ K
Sbjct: 406 LTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAF 465
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ + + K D++M Y L+ + + G L+ A F E+ +G++P Y +
Sbjct: 466 RLFRVMQSTYLKPDIAM----YNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTI 521
Query: 518 EEKLEKKRL 526
L K+ L
Sbjct: 522 INNLCKEGL 530
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 160/317 (50%), Gaps = 4/317 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+++ L +++ L+ EM LN ++ T + ++ + + G+ +A F+ M
Sbjct: 273 YNSLIQGLCNFRRWKEASALLNEMTSLNI-MPNIFTFNVLVDAICKEGKVSEAQGVFKTM 331
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ GVE D S LM + A K+F + K C P + +NILI G+CK ++
Sbjct: 332 TEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKP-DAFSYNILIKGYCKAKR 390
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A++ EM QG +PD V+Y I C+ R+ D K M G P + TY++
Sbjct: 391 IDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM 450
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ K + +A +++ M+S PD + Y+ LI + K G +KDA ++F ++ QG
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
++PNV Y T+I++ C + AL+ + ME D C PD +Y +++ + K
Sbjct: 511 LLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAA 570
Query: 462 FLLTHMFKNDVSMDAGT 478
L+ M +AGT
Sbjct: 571 QLIGEMRDRGFVAEAGT 587
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 138/277 (49%), Gaps = 3/277 (1%)
Query: 264 LSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
LS I+ +ILI + ++VD A +M + G PD V++ I C+ F +
Sbjct: 126 LSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAV 185
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ + + GC+P+V TYT +++ L K + A +++KM+ C P+ Y+ LI L
Sbjct: 186 EFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSL 245
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K V +A +IF MK + + P++ TYN++I C + A LL +M P+
Sbjct: 246 CKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNI 305
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
T+ L+ C++ ++ + M + V D TY+SL+ G ++ A F+
Sbjct: 306 FTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDA 365
Query: 502 MISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLL 537
MI+KG P +Y +L + K KR+ AK+ N+++
Sbjct: 366 MITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMI 402
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 93/363 (25%), Positives = 174/363 (47%), Gaps = 2/363 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ Y T++ L K L++ M + N ++ T +TI+ L + + ++
Sbjct: 174 GFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQ-KNCEPNVITYNTIIDCLFKDRQVNE 232
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIH 274
A+ F M G+ + + ++ L K + +H + E D I + IF L+
Sbjct: 233 ALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVD 292
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
CK V A + M Q+G PDVV+YT ++ +C + + D M KGC P
Sbjct: 293 ALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP 352
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+VI+Y+ +++ K ++I++A+ ++E+M + +P+ Y++LI L GR++DA +F
Sbjct: 353 NVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALF 412
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+M G +P+++TY ++ C + A+ +L+ +E PD ++Y ++ CR
Sbjct: 413 HEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRV 472
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ L + + + D TY ++ GL G L A F EM + G P TY
Sbjct: 473 GELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTY 532
Query: 515 KML 517
++
Sbjct: 533 NLI 535
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 170/357 (47%), Gaps = 4/357 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
+ K + + L K+MD L G S + T++ ++ R D + K G +
Sbjct: 84 IANMKHYSTVLSLSKQMDSL--GIPSDVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQ 141
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
DT + L+ L + A +F + + + + LIHG CK A +
Sbjct: 142 PDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRL 201
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
++ M Q+ P+V++Y I+ +++ + + EM KG P+V TY ++H L K
Sbjct: 202 LRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCK 261
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
+ + +M +P+ +++L+ L K G V A+++ + M ++GV P+V+T
Sbjct: 262 FSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVT 321
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y ++ C RSE + A K+ M C P+ +Y+ L+ C+ +R+ +L M
Sbjct: 322 YTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMC 381
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+ ++ + TY +L+ GL G+L A + F EM++ G +P TY++L + L K R
Sbjct: 382 QRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTR 438
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 157/329 (47%), Gaps = 4/329 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+++ L K ++ + L+ EM + + ++ +T++ L + G A + M
Sbjct: 252 YNSIIHGLCKFSEWKHVATLMNEMVD-SKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVM 310
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ GVE D + LMD + ++ A KVF + K C P + ++ LI+G+CK ++
Sbjct: 311 IQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAP-NVISYSTLINGYCKIQR 369
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A +EM Q+ P++V+Y I C R EM G P ++TY I
Sbjct: 370 IDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRI 429
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K + +++A+ + + ++ + PD Y+ +I + + G ++ A ++F + +G
Sbjct: 430 LLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKG 489
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+V TY MI+ C + A KL ++M D C PD TY + + R
Sbjct: 490 LHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAI 549
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESG 490
LL M S DA T +V L + G
Sbjct: 550 QLLQEMLGRGFSADASTITLIVEMLSDDG 578
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/372 (22%), Positives = 165/372 (44%), Gaps = 4/372 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++D L K ++ + EM + G +++T ++I+ L + +
Sbjct: 217 YNTIIDCLFKDRQVNEALNIFSEM--IAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNE 274
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRK 281
M + + + L+D L K V A+ V + + + + L+ G C +
Sbjct: 275 MVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSE 334
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A K M ++G +P+V+SY+ I YC+ + K +EM ++ P+++TY
Sbjct: 335 MDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNT 394
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H L ++ +A+ ++ +M + +PD Y L+ L K + A + + ++
Sbjct: 395 LIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSN 454
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P++ +YN +I C E E A L + PD TY ++ C + +
Sbjct: 455 LAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEAT 514
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M + S D TY + RG + + + A +EM+ +G ST ++ E L
Sbjct: 515 KLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEML 574
Query: 522 EKKRLGNAKERI 533
L + ++I
Sbjct: 575 SDDGLDQSVKQI 586
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A + M P VV + + K + V K+M G V T I
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+++ +++ V K+ PDT+ +++LI L G++ +A +F+ M +G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PN +TY T+I C A++LL+ M + C+P+ TY ++ + +++
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ + M +S + TY S++ GL + + + + EM+ I+P + L + L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294
Query: 522 EKKRL 526
K+ +
Sbjct: 295 CKEGM 299
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 112/276 (40%), Gaps = 39/276 (14%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFR 221
++ T+VD L K + ++V M + G + T + +M D+A + F
Sbjct: 286 IFTTLVDALCKEGMVTIAHDVVDVM--IQRGVEPDVVTYTALMDGHCLRSEMDEADKVFD 343
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE------------------------ 257
M + G + + S L++ K ++ A +F E
Sbjct: 344 TMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVG 403
Query: 258 -FKDCIPL------SSQI-----FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
+D I L S QI + IL+ CKTR +D A +K + +PD+ SY
Sbjct: 404 RLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYN 463
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I+ CR + D + KG P V TYTI+++ L + EA K++ +M +D
Sbjct: 464 IVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTD 523
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
C PD Y+ + + A ++ ++M +G
Sbjct: 524 GCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRG 559
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 73/182 (40%)
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
I+EAL + +M P ++ ++ ++ + + M G+ +V T
Sbjct: 55 IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I+S C + + +L K+ + +PD T+ L++ C + ++ L M
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
+ TY +L+ GL + G A M+ K P TY + + L K R N
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234
Query: 532 RI 533
I
Sbjct: 235 NI 236
>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
Length = 631
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 160/313 (51%), Gaps = 3/313 (0%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPL 264
L + + ++A+ F+ ++ GV D S LMD K A +VF + C+P
Sbjct: 310 LCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKAGCMP- 368
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ ++N+LI K KVD+A + +++M ++G PD +Y I+ + K
Sbjct: 369 DTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFF 428
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
M+ + P V+TY +++ L K ++ +EA ++++M+++ C+PD + + +LI L+KA
Sbjct: 429 GMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKA 488
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
GR++DA E + K G PN YN +IS C + + +L Q M E C PD TY
Sbjct: 489 GRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITY 548
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ R+ + LL M + + TY L+R L +G++E A + F+EMI+
Sbjct: 549 TILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIA 608
Query: 505 KGIVPYHSTYKML 517
KG P TY L
Sbjct: 609 KGFNPDMQTYSAL 621
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 196/465 (42%), Gaps = 51/465 (10%)
Query: 122 GVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGYMHTPEM--YNTMVDVLGKSKKF 177
GV +S + ++ F + DL A G + G P+ + + L + ++
Sbjct: 48 GVGLSEVTCTECIQAFGRAGDLDAAMGMLD--DMRRGNFCQPDTVAFTAAMHWLCEVRRV 105
Query: 178 CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
L +M E + + +T++ + G D A++ FR +K+ G K +V
Sbjct: 106 EQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPN---AV 162
Query: 238 LMDTLV----KGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
DTLV K + A VF E + + N LIH C+ + A++ + M
Sbjct: 163 SFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHM 222
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH-------- 344
+ D +Y + +CR +V ++ + GC S + Y ++
Sbjct: 223 TAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRL 282
Query: 345 --------------------------ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
AL K+KQ+ EAL ++++ + + D YS L+
Sbjct: 283 AEATQLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLM 342
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
KAGR A E+F +M+K G +P+ + YN +IS + + + AL+LL+ M
Sbjct: 343 DAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIM 402
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PDC TY ++ + R + M + S D TY +L+ GL + + + AC
Sbjct: 403 PDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL 462
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL--LAHA 540
F+EM + +P +T+ L + L K R+ +A E+ +L + HA
Sbjct: 463 FDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHA 507
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/392 (23%), Positives = 168/392 (42%), Gaps = 42/392 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++T+V L K + + +EM L G + +T++ R G A
Sbjct: 164 FDTLVIFLCKMSRATDALAVFQEM--LGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHH 221
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTR 280
M + +D +L++ + + H F+E D LS+ +N +I G+ +
Sbjct: 222 MTAHACARDAFTYGILVNAHCRAGQM-HEVASFMELARHDGCALSAVNYNFIIQGFIRCG 280
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ +A + + + PDV +Y I C+ K + +E ++ G V TY+
Sbjct: 281 RLAEATQLFESTMTKESVPDVFTYNLLIA-LCKSKQLEEALTLFQEAEQGGVVLDVFTYS 339
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+M A GKA + +AL+V+ M+ C+PDT Y+ LI L K G+V +A E+ EDM ++
Sbjct: 340 YLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 399
Query: 401 GVVPN-----------------------------------VLTYNTMISSACARSEEENA 425
G++P+ V+TYNT+++ + A
Sbjct: 400 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA 459
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L +M+ + C PD T+ L+ + RM+ + K + ++ Y +L+ G
Sbjct: 460 CDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISG 519
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKML 517
SG+++ F++MI P TY +L
Sbjct: 520 FCRSGQVDKGYELFQDMIECSCFPDSITYTIL 551
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 138/318 (43%), Gaps = 4/318 (1%)
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
A+ ++ + K G+ D + ++ + K G + A + + + LS I
Sbjct: 2 ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61
Query: 275 GWCKTRKVDDAQKAMKEMFQQGF-SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GC 332
+ + +D A + +M + F PD V++T + C + + +M+E C
Sbjct: 62 AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSD-DCLPDTSFYSSLIFILSKAGRVKDAN 391
P V+ Y ++ KA + AL ++ ++K + C P+ + +L+ L K R DA
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+F++M G+ +V NT+I C A +LL M C D TY L+
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAH 241
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
CR +M + + + ++ A Y +++G I G+L A FE ++K VP
Sbjct: 242 CRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDV 301
Query: 512 STYKMLEEKLEKKRLGNA 529
TY +L + K+L A
Sbjct: 302 FTYNLLIALCKSKQLEEA 319
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 7/200 (3%)
Query: 144 AFGFFTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS 201
A+ FF K + H+P++ YNT+++ L K ++ +L EM + N L T
Sbjct: 424 AYSFFGMMKRRK---HSPDVVTYNTLLNGLKKLRRTDEACDLFDEM-QANKCMPDLTTFG 479
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
T++ L + GR +DA+E + K G ++ + L+ + V+ Y++F + +C
Sbjct: 480 TLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIEC 539
Query: 262 IPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
I + IL+ G+ + A + ++EM ++G +P + +Y I
Sbjct: 540 SCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDA 599
Query: 321 DDTLKEMQEKGCKPSVITYT 340
KEM KG P + TY+
Sbjct: 600 YTLFKEMIAKGFNPDMQTYS 619
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 175/387 (45%), Gaps = 45/387 (11%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
SL T +T++ L + G+ +AV F + ++ + D + L+ + ++ A++VF
Sbjct: 196 SLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVF 255
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
KD +S ++ LI+G C ++ +A ++EM ++G P V +YT I C
Sbjct: 256 DRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLC-- 313
Query: 315 KDFRKVDDTL---KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
D +VDD + + M +KGC PSV TYT ++ L +A ++ A+ +Y KM + +P+T
Sbjct: 314 -DIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNT 372
Query: 372 SFYSSLIFILSKAGR-----------------------------------VKDANEIFED 396
Y++LI L GR ++ A +F
Sbjct: 373 VTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNK 432
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M K G P V+TYNT+I R NA + L M+E C+PD TY L+ C+ +
Sbjct: 433 MLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGK 492
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ M K +S + TY +++ G + GK+++A S FE M G TY
Sbjct: 493 LDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNA 552
Query: 517 LEEKLEKKRLGNAKERINKLLAHAKEQ 543
+ L K GN K A EQ
Sbjct: 553 IISGLSK---GNRFSEAEKFCAKMTEQ 576
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 116/432 (26%), Positives = 188/432 (43%), Gaps = 64/432 (14%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFC-------LMWELVKEMDEL------ 190
A FF W + Y H + +M++ L K K LM + + DEL
Sbjct: 87 ALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRILMIKACRNEDELKRVTDF 146
Query: 191 -----------------------------------NNGYV---------SLATMSTIMRR 206
N Y SL T +T++
Sbjct: 147 LHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINI 206
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLS 265
L + G+ +AV F + ++ + D + L+ + ++ A++VF KD +
Sbjct: 207 LCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPN 266
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL- 324
S ++ LI+G C ++ +A ++EM ++G P V +YT I C D +VDD +
Sbjct: 267 SVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLC---DIGRVDDAIN 323
Query: 325 --KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+ M +KGC PSV TYT ++ L +A ++ A+ +Y KM + +P+T Y++LI L
Sbjct: 324 LVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELC 383
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
GR A +IF+ M+ G + N TYN +I + E A+ + KM +D P
Sbjct: 384 TEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVV 443
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ ++ + L M +++ D TY L+ G + GKL+ A SFF EM
Sbjct: 444 TYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEM 503
Query: 503 ISKGIVPYHSTY 514
+ GI P TY
Sbjct: 504 LKCGISPNQWTY 515
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 160/364 (43%), Gaps = 40/364 (10%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T +T++ ++ G ++A MK+ E D R L+ KG ++ A F
Sbjct: 441 TVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFF 500
Query: 256 LEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E C I + + +I G+CK K+D A + M + G S + +Y I +
Sbjct: 501 YEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKG 560
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
F + + +M E+G +P+ ITYT +++ L K N A K++ +M+ +CLP+ Y
Sbjct: 561 NRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTY 620
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+SLI+ L + G+V A E + + G P + TY+T++S C A +L++ M+E
Sbjct: 621 TSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKE 676
Query: 435 DLCKPDCETYAPLLKMCCRKKR----MKVLNFLLT-----HMF----------------- 468
P E Y LL C+ + +++ N + H+F
Sbjct: 677 KGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEE 736
Query: 469 ---------KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
K + D + LV GL++ G +L F M S+ P TY +L
Sbjct: 737 ALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILAR 796
Query: 520 KLEK 523
+L K
Sbjct: 797 ELSK 800
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/373 (25%), Positives = 162/373 (43%), Gaps = 2/373 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+T+++ L + ++++EM E ++ T + + L GR DDA+ R M
Sbjct: 270 YSTLINGLCNEGRIGEAMDMLEEMTE-KGIEPTVYTYTVPISSLCDIGRVDDAINLVRSM 328
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
K G + + ++ L + +E A ++ + K+ + ++ +N LI+ C +
Sbjct: 329 GKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRF 388
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A K M G + +Y I+ D K +M + G P+V+TY +
Sbjct: 389 GIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTL 448
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ K +N A + MK +C PD Y LI K G++ A F +M K G+
Sbjct: 449 IVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGI 508
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN TY MI C + + AL L ++MEE+ C ETY ++ + R
Sbjct: 509 SPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEK 568
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
M + + + TY SL+ GL ++ LA F EM K +P TY L L
Sbjct: 569 FCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLC 628
Query: 523 KKRLGNAKERINK 535
++ +A ER+ +
Sbjct: 629 QEGKVDAAERLTE 641
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/253 (21%), Positives = 108/253 (42%), Gaps = 6/253 (2%)
Query: 148 FTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRL 207
F T+ G Y ++++ L K+ L +++ EM++ N + T ++++ L
Sbjct: 569 FCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEK-KNCLPNAHTYTSLIYGL 627
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSS 266
+ G+ D A + + G E S L+ L + A ++ K+ + S
Sbjct: 628 CQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSM 683
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+I+ L+ CK+ KVD A + M +GF P + Y I C + + +
Sbjct: 684 EIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQS 743
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
+ +K +I +T+++ L + + +K M+S +C P Y L LSK G+
Sbjct: 744 LLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGK 803
Query: 387 VKDANEIFEDMKK 399
++I +++
Sbjct: 804 SIGTDQIGNRLRE 816
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 162/329 (49%), Gaps = 1/329 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
A +T++ G A F M++ G+ D + L++ L + ++ A KV E
Sbjct: 365 AVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQE 424
Query: 258 -FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ + + +L+ G+CK K+ +A + M Q+G +P+VV+YT + C++ D
Sbjct: 425 MLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGD 484
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ ++ L EM KG + + TY +++ L KA +++A++ M + PD Y++
Sbjct: 485 VQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTT 544
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI L K+G + A+++ ++M G+ P ++TYN +++ C E KLL+ M E
Sbjct: 545 LIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKN 604
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
P+ TY L+K C MK + M +V + TY L++G ++ ++ A
Sbjct: 605 IHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQ 664
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
F EMI KG S+Y L L KK+
Sbjct: 665 YFHNEMIEKGFRLTASSYSALIRLLNKKK 693
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 160/355 (45%), Gaps = 5/355 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++ VL + + +L EM + + T ++ G ++AV+ M
Sbjct: 265 YNILLKVLCGAGRVEDARQLFDEMASPPD----VVTYGILIHGYCALGELENAVKLLDDM 320
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
GVE + + ++ L V A V + + L ++ ++ G+C +
Sbjct: 321 VARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDL 380
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A++ EM ++G + D V+YT I CR + ++ + L+EM + +TYT++
Sbjct: 381 VSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVL 440
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ K ++ EA +V+ M P+ Y++L L K G V+ ANE+ +M +G+
Sbjct: 441 VDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGL 500
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
N TYN++I+ C + A++ + M+ KPD TY L+ C+ + +
Sbjct: 501 ELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHD 560
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M N + TY L+ G SG++E E M+ K I P +TY L
Sbjct: 561 LLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSL 615
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 180/400 (45%), Gaps = 9/400 (2%)
Query: 114 VVEALKGCGVSVSNSLVEQTLRRFSN--DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL 171
VVE + V + ++ L F N DL A +F + + G Y T+++ L
Sbjct: 351 VVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQ-RKGLATDGVTYTTLINGL 409
Query: 172 GKSKKFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
++ + ++++EM L+ V T + ++ + G+ +A + M + GV
Sbjct: 410 CRAGELKEAEKVLQEMLARRLD---VDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVA 466
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKA 288
+ + L D L K V+ A ++ E + + L++ +N LI+G CK +D A +
Sbjct: 467 PNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRT 526
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
M +M G PDV +YT I+ C+ + + D L+EM + G KP+++TY ++M+
Sbjct: 527 MADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCM 586
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
+ ++ K+ E M + P+ + Y+SL+ +K EI++ M + V PN T
Sbjct: 587 SGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENT 646
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YN +I C + A +M E + +Y+ L+++ +KK+ L M
Sbjct: 647 YNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMR 706
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
K + + Y + LE + +E++ IV
Sbjct: 707 KEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASIV 746
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 141/298 (47%), Gaps = 10/298 (3%)
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKT 279
R +++YG+ A + ++ L ++ A ++F D S +NIL+ C
Sbjct: 223 LRRVRQYGISPSPEACNAVLSRL----PLDEAIELFQGLPDKNVCS---YNILLKVLCGA 275
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+V+DA++ EM PDVV+Y I YC + L +M +G +P+ Y
Sbjct: 276 GRVEDARQLFDEMAS---PPDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVY 332
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T V+ L ++++AL V E M + D + Y++++ G + A F++M++
Sbjct: 333 TSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQR 392
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+ + +TY T+I+ C E + A K+LQ+M D TY L+ C++ +M
Sbjct: 393 KGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAE 452
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ M + V+ + TY +L GL + G ++ A EM +KG+ TY L
Sbjct: 453 AFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSL 510
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 109/234 (46%), Gaps = 3/234 (1%)
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
E+FQ +V SY ++ C +V+D + E P V+TY I++H
Sbjct: 252 ELFQGLPDKNVCSYNILLKVLCGAG---RVEDARQLFDEMASPPDVVTYGILIHGYCALG 308
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++ A+K+ + M + P+ + Y+S++ +L GRV DA + EDM V+ + Y
Sbjct: 309 ELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYT 368
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
T++S C + + +A + +M+ D TY L+ CR +K +L M
Sbjct: 369 TVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLAR 428
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ +D TY LV G + GK+ A M+ +G+ P TY L + L K+
Sbjct: 429 RLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQ 482
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 217/472 (45%), Gaps = 22/472 (4%)
Query: 69 LAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL--------KG 120
L G+ S R++E + ++ ++ + + ++ + +K EA+ KG
Sbjct: 158 LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH-NKASEAMALIDRMVAKG 216
Query: 121 C--GVSVSNSLVEQTLRRFSNDLTPAFGFFT---WAKTQTGYMHTPEMYNTMVDVLGKSK 175
C + +V +R DL AF K + G + +YNT++D L K K
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDL--AFNLLNKMEQGKLEPGVL----IYNTIIDGLCKYK 270
Query: 176 KFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRAL 235
L KEM E ++ T S+++ L GR+ DA M + + D
Sbjct: 271 HMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329
Query: 236 SVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQ 294
S L+D VK + A K++ E K I S ++ LI+G+C ++D+A++ + M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389
Query: 295 QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
+ PDVV+Y I+ +C+ K + + +EM ++G + +TY I++ L +A +
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A +++++M SD P+ Y++L+ L K G+++ A +FE +++ + P + TYN MI
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C + E+ L + KPD Y ++ CRK + + L M ++
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
++G Y +L+R + G E + +EM S G ST ++ L RL
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRL 621
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 181/371 (48%), Gaps = 6/371 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G H Y+ +++ + + L ++ +M +L GY ++ T+S+++ R
Sbjct: 111 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL--GYEPNIVTLSSLLNGYCHSKRIS 168
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
+AV M G + +T + L+ L N A + + K C P + ++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQP-DLVTYGVV 227
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
++G CK D A + +M Q P V+ Y I+ C+ K + KEM+ KG
Sbjct: 228 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 287
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+P+V+TY+ ++ L + ++A ++ M PD +S+LI K G++ +A +
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
++++M K+ + P+++TY+++I+ C + A ++ + M C PD TY L+K C
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 407
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ KR++ + M + + + TY L++GL ++G ++A F+EM+S G+ P
Sbjct: 408 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 513 TYKMLEEKLEK 523
TY L + L K
Sbjct: 468 TYNTLLDGLCK 478
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 136/306 (44%), Gaps = 36/306 (11%)
Query: 248 VEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
++ A +F E P S I F+ L+ K K D ++M G + +Y+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I +CR L +M + G +P+++T + +++ +K+I+EA+ + ++M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
P+T +++LI L + +A + + M +G P+++TY +++ C R + + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 427 KLLQKMEE---------------DLCK--------------------PDCETYAPLLKMC 451
LL KME+ LCK P+ TY+ L+
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C R + LL+ M + ++ D T+++L+ ++ GKL A ++EM+ + I P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 512 STYKML 517
TY L
Sbjct: 362 VTYSSL 367
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 110/237 (46%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+DDA EM + P ++ ++ + + F V ++MQ G + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + Q+ AL V KM P+ SSL+ + R+ +A + + M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G PN +T+NT+I ++ A+ L+ +M C+PD TY ++ C++ +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + + Y +++ GL + ++ A + F+EM +KGI P TY L
Sbjct: 241 FNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%)
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++++A+ ++ +M P +S L+ ++K + + E M+ G+ N TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I+ C RS+ AL +L KM + +P+ T + LL C KR+ L+ MF
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ T+ +L+ GL K A + + M++KG P TY ++ L K+
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 119/470 (25%), Positives = 217/470 (46%), Gaps = 18/470 (3%)
Query: 69 LAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL--------KG 120
L G+ S R++E + ++ ++ + + ++ + +K EA+ KG
Sbjct: 158 LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH-NKASEAVALIDRMVAKG 216
Query: 121 C--GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEM-YNTMVDVLGKSKKF 177
C + +V +R DL F K + G + + Y T++D L K+K
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLA----FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHM 272
Query: 178 CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
L KEM E ++ T S+++ L GR+ DA M + + D S
Sbjct: 273 DDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 331
Query: 238 LMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L+D VK + A K++ E K I S ++ LI+G+C ++D+A++ + M +
Sbjct: 332 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 391
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
PDVVSY+ I+ +C+ K + + +EM ++G + +TYT ++ L +A + A
Sbjct: 392 CFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQ 451
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+++++M SD P+ Y++L+ L K G+++ A +FE +++ + P + TYN MI
Sbjct: 452 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 511
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
C + E+ L + KPD Y ++ CRK + + L M ++ ++
Sbjct: 512 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 571
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
G Y +L+R + G E + +EM S G ST ++ L RL
Sbjct: 572 GCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRL 621
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 183/371 (49%), Gaps = 6/371 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G H Y+ +++ + + L ++ +M +L GY ++ T+S+++ R
Sbjct: 111 GMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL--GYEPNIVTLSSLLNGYCHSKRIS 168
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
+AV M G + +T + L+ L N A + + K C P + ++
Sbjct: 169 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQP-DLVTYGVV 227
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
++G CK D A + +M Q P V+ YT I+ C+ K + KEM+ KG
Sbjct: 228 VNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGI 287
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+P+V+TY+ ++ L + ++A ++ M PD +S+LI K G++ +A +
Sbjct: 288 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 347
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
++++M K+ + P+++TY+++I+ C + A ++ + M C PD +Y+ L+K C
Sbjct: 348 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFC 407
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ KR+ L M + + + TY +L++GL ++G ++A F+EM+S G+ P
Sbjct: 408 KAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 467
Query: 513 TYKMLEEKLEK 523
TY L + L K
Sbjct: 468 TYNTLLDGLCK 478
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 136/306 (44%), Gaps = 36/306 (11%)
Query: 248 VEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
++ A +F E P S I F+ L+ K K D ++M G + +Y+
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I +CR L +M + G +P+++T + +++ +K+I+EA+ + ++M
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
P+T +++LI L + +A + + M +G P+++TY +++ C R + + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 427 KLLQKMEE---------------DLCK--------------------PDCETYAPLLKMC 451
LL KME+ LCK P+ TY+ L+
Sbjct: 242 ILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C R + LL+ M + ++ D T+++L+ ++ GKL A ++EM+ + I P
Sbjct: 302 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 361
Query: 512 STYKML 517
TY L
Sbjct: 362 VTYSSL 367
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 111/237 (46%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+DDA EM + P ++ ++ + + F V ++MQ G + TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + Q+ AL V KM P+ SSL+ + R+ +A + + M
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G PN +T+NT+I ++ A+ L+ +M C+PD TY ++ C++ +
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLA 240
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + + Y +++ GL ++ ++ A + F+EM +KGI P TY L
Sbjct: 241 FILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSL 297
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 83/174 (47%)
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++++A+ ++ +M P +S L+ ++K + + E M+ G+ N TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I+ C RS+ AL +L KM + +P+ T + LL C KR+ L+ MF
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ T+ +L+ GL K A + + M++KG P TY ++ L K+
Sbjct: 181 GYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKR 234
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 174/426 (40%), Gaps = 71/426 (16%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKK 176
AL + ++V L RF + P++ FF WA G+ HT Y M+ +LGK+++
Sbjct: 184 ALSALSPPLCEAVVLAVLHRFKHAHRPSYRFFRWATVSGGFTHTTITYCKMLHILGKTRQ 243
Query: 177 FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALS 236
F M +++EM + G +S+ ++ G +AV F M+K G + + +
Sbjct: 244 FESMVAMIQEMGKA--GALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGFDDGVESFN 301
Query: 237 VLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L+ L K A +VF + + + L+ WC R + +A + EM ++G
Sbjct: 302 CLLVALAKEGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKG 361
Query: 297 FSPDVV-----------------------------------SYTCFIEHYCREKDFRKVD 321
PDVV +YT I +C++
Sbjct: 362 MDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAM 421
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ +EMQE C+P V TYT ++ G AKQ++ V E+M C PD Y++LI +L
Sbjct: 422 ECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLL 481
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+ DA I++ M K+G+ P + TYN M+ S
Sbjct: 482 TNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGD--------------------- 520
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
YA M C + M + + D +Y + I G+ E A + EE
Sbjct: 521 SNYA----MGCA---------VWEEMHQRGICPDVNSYTVFINRHIRHGRPEEAYKYIEE 567
Query: 502 MISKGI 507
MI+KG+
Sbjct: 568 MINKGM 573
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 122/264 (46%), Gaps = 2/264 (0%)
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++H KTR+ + ++EM + G + + ++ I+ + + + + M++ G
Sbjct: 234 MLHILGKTRQFESMVAMIQEMGKAG-ALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNG 292
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
V ++ ++ AL K EA +V++KM PD Y++L+ A + +A
Sbjct: 293 FDDGVESFNCLLVALAKEGLGREARQVFDKMHGQYS-PDLRSYTALMLAWCNARNLVEAG 351
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++ +M ++G+ P+V+ +NTMI A+K+ + M+ P+ TY L++
Sbjct: 352 RVWNEMLEKGMDPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDH 411
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++ +M + M + D TY L+ G + +++ + EEM KG P
Sbjct: 412 CKQGKMDMAMECFEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDA 471
Query: 512 STYKMLEEKLEKKRLGNAKERINK 535
TY L + L + + + RI K
Sbjct: 472 RTYNALIKLLTNRNMPDDAARIYK 495
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 183/372 (49%), Gaps = 4/372 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGR 212
+ G T + N ++ VL K+ +F L+W + +EM ++NG S+ T T++ R G
Sbjct: 140 KVGAALTIQACNVLLYVLVKTGRFELLWRIYEEM--ISNGLSPSVITFGTLIDGCCRQGD 197
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNI 271
A E F M+ G+ ++L+ L N +E A + ++ + + +N
Sbjct: 198 LLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNT 257
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+ G+CK A + ++M +G PDVV++ I+ C+ + + + M +
Sbjct: 258 LMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFS 317
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P++ Y ++ A K ++EA+ ++ +++ + PD YS LI L R ++A
Sbjct: 318 VTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAG 377
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
IFE M K+G++ N +TYN++I C + + AL++ +M E+ +P+ T++ L+
Sbjct: 378 NIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGY 437
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C+ + ++ + + M +S D TY +++ G + G ++ A + +M+ GI P
Sbjct: 438 CKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNC 497
Query: 512 STYKMLEEKLEK 523
T L + L K
Sbjct: 498 YTISCLLDGLCK 509
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 143/309 (46%), Gaps = 1/309 (0%)
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGW 276
EA K G +A +VL+ LVK E ++++ E + + S F LI G
Sbjct: 133 EALSMYHKVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGC 192
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
C+ + AQ+ EM +G P V+ YT I C + + + + M+E G P+V
Sbjct: 193 CRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNV 252
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TY +M K +AL++Y+ M + +PD + LI L K G +K A +F +
Sbjct: 253 YTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVN 312
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M K V PN+ YN++I + C + A+ L ++E PD TY+ L++ C R
Sbjct: 313 MIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSR 372
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ + M K + ++ TY SL+ G + GK++ A +M G+ P T+
Sbjct: 373 TEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFST 432
Query: 517 LEEKLEKKR 525
L + K R
Sbjct: 433 LIDGYCKIR 441
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 172/390 (44%), Gaps = 31/390 (7%)
Query: 151 AKTQTGYMHTPEMYNTMVDV---LGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRR 206
A + G YNT++D L +K+ +++ D L G V + T ++
Sbjct: 242 AMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQ-----DMLGEGLVPDVVTFGILIDG 296
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS 266
L + G A F M K+ V + + L+D K V A +FLE + +S
Sbjct: 297 LCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELER-FEVSP 355
Query: 267 QIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+F +ILI G C + ++A ++M ++G + V+Y I+ C+E K +
Sbjct: 356 DVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEIC 415
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+M E G +P+VIT++ ++ K + + A+ +Y +M PD Y+++I K
Sbjct: 416 SQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKY 475
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL-QKMEEDLCKPDCET 443
G +K+A +++ DM G+ PN T + ++ C + +AL+L +K+E P C
Sbjct: 476 GSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQ--TPRCNV 533
Query: 444 --------------YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
Y L+ C+ + L + M + + D Y ++RGL +
Sbjct: 534 DAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQV 593
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ + +M+ G++P + + +L E
Sbjct: 594 KYILMM--LHADMLKFGVIPNSAVHVILCE 621
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 127/293 (43%), Gaps = 23/293 (7%)
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDA-QK 287
EK+ + S ++ LV + HA + N L+ K+ K A Q
Sbjct: 55 EKNIQLYSAIIHVLVGSKLLSHA--------------RYLLNDLVQNLVKSHKPYHACQL 100
Query: 288 AMKEMFQ---QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A E+ + F+P+V Y I C+ V++ L + G ++ ++++
Sbjct: 101 AFSELSRLKSSKFTPNV--YGELIIVLCK---MELVEEALSMYHKVGAALTIQACNVLLY 155
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
L K + ++YE+M S+ P + +LI + G + A E+F++M+ +G+VP
Sbjct: 156 VLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVP 215
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
V+ Y +I C+ ++ E A + + M E P+ TY L+ C+ K L
Sbjct: 216 TVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLY 275
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M + D T+ L+ GL + G+++ A + F MI + P + Y L
Sbjct: 276 QDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSL 328
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/262 (20%), Positives = 111/262 (42%), Gaps = 17/262 (6%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
T+ G + YN+++D K K E+ +M E N ++ T ST++ +
Sbjct: 384 TKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTE-NGVEPNVITFSTLIDGYCKIRN 442
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNI 271
A+ + M + D + ++D K S++ A K++ + D I + +
Sbjct: 443 LQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISC 502
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQ----------QGFSPDV---VSYTCFIEHYCREKDFR 318
L+ G CK K+ DA + E + G P + V+YT I C++ F
Sbjct: 503 LLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFS 562
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
K +M+ G +P + Y +++ L + K I + ++ M +P+++ + L
Sbjct: 563 KAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYI--LMMLHADMLKFGVIPNSAVHVILC 620
Query: 379 FILSKAGRVKDANEIFEDMKKQ 400
++G +K A +D+++
Sbjct: 621 ECYQESGFLKSAQNCSKDLEEN 642
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 112/411 (27%), Positives = 197/411 (47%), Gaps = 20/411 (4%)
Query: 122 GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
G+S+ + + R + TP F G ++N ++ + F +
Sbjct: 149 GISLPAPVCSGLMSRLPS--TPEAYTFYLQLLDAGMAPETRLFNVLM------RDFVRLG 200
Query: 182 ELV---KEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEA-FRGMKKYGVEKDTRALS 236
ELV K DE+ ++ T +T++ + R R DAV+ ++ M GV+ D
Sbjct: 201 ELVSARKVFDEMRRSVQPTVVTFNTLISGMCRA-RDLDAVDGLYKEMSDVGVKPDVYTYG 259
Query: 237 VLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
L+ + +E+A K+F E +D + ++ +F LI CK V+ ++M +
Sbjct: 260 ALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVR 319
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G PD+V+Y + CR ++ + + ++EM+ G KP +TYT ++ K +++ A
Sbjct: 320 GVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMA 379
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+ + +KM + D Y++LI LSKAGR DA + +M + + P+ TY +I +
Sbjct: 380 MDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDA 439
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C + + + KLL++M+ KP TY ++ C+ +MK + LL M VS D
Sbjct: 440 FCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPD 499
Query: 476 AGTYASLVRGLIESGKLELACSFFEEM-ISKGIVPYHSTYKMLEEKLEKKR 525
TY L+ G + GK+ + EE+ SKG+VP + Y L +L KK+
Sbjct: 500 DITYNILLDGQCKHGKV----ANSEELESSKGMVPDFAVYTSLISELAKKK 546
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 145/314 (46%), Gaps = 4/314 (1%)
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQ 286
G+ +TR +VLM V+ + A KVF E + + + FN LI G C+ R +D
Sbjct: 181 GMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLISGMCRARDLDAVD 240
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
KEM G PDV +Y I+ +CR EM++ G P+ + +T ++ A
Sbjct: 241 GLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAH 300
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
K +N + +Y+ M+ +PD Y++L+ L +A +K A I E+MK G+ P+
Sbjct: 301 CKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDK 360
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+TY T+I C + + A+ + QKM E D TY L+ + R +L
Sbjct: 361 VTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLRE 420
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
M + + D TY ++ G ++ +EM +KG P TY ++ L K L
Sbjct: 421 MMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCK--L 478
Query: 527 GNAKERINKLLAHA 540
G K +L HA
Sbjct: 479 GQMKNA--DMLLHA 490
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 182/380 (47%), Gaps = 19/380 (5%)
Query: 157 YMHTPEM---YNTMVDVLGKSKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVRG 210
+MH P + ++ + K K + + L +MD N Y T++ ++
Sbjct: 52 HMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY----TLNILINSFCHL 107
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQ-- 267
R A + K G + + +TL++G VE L F I Q
Sbjct: 108 QRLGFAFSVLAKILKLGHQPNIATF----NTLIRGLCVEGKIGEVLHLFDKMIGEGFQPN 163
Query: 268 --IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+ LI+G CK A + ++ M Q PDVV YT I+ C+++ + +
Sbjct: 164 VVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFS 223
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM +G PS+ TY ++HAL + + +M + +P+ +S+++ L K G
Sbjct: 224 EMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEG 283
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+V +A+++ + M K+GV PNV+TYN ++ C RSE + A+K+ M PD +Y+
Sbjct: 284 KVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYS 343
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ C+ +R++ +L M + ++ + TY++L+ GL G+L+ A + F EM+++
Sbjct: 344 TLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTR 403
Query: 506 GIVPYHSTYKMLEEKLEKKR 525
G +P +Y +L + L K R
Sbjct: 404 GQIPDFVSYCILLDYLCKNR 423
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 184/412 (44%), Gaps = 40/412 (9%)
Query: 144 AFGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMS 201
F F AK + G+ +NT++ L K + L +M + G+ ++ T
Sbjct: 111 GFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM--IGEGFQPNVVTYG 168
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF------ 255
T++ L + G A+ R M++ + D + ++D+L K V A+ +F
Sbjct: 169 TLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ 228
Query: 256 -------------------LEFKDCIPLSSQ-----------IFNILIHGWCKTRKVDDA 285
E+K L ++ IF+ ++ CK KV +A
Sbjct: 229 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA 288
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ M ++G P+VV+Y ++ +C + + M KG P V++Y+ +++
Sbjct: 289 HDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLING 348
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K ++I +A+ ++E+M + +P+T YS+L+ L GR++DA +F +M +G +P+
Sbjct: 349 YCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 408
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
++Y ++ C + A+ LL+ +E PD + Y ++ CR ++ L +
Sbjct: 409 FVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFS 468
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ + + TY ++ GL + G L A F EM KG P TY ++
Sbjct: 469 NLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 520
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 168/373 (45%), Gaps = 4/373 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
+Y +++D L K ++ + L EM ++ G S+ T ++++ L +
Sbjct: 201 VYTSIIDSLCKDRQVTQAFNLFSEM--IHQGISPSIFTYNSLIHALCNLCEWKHVTALLN 258
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTR 280
M + + S ++D L K V A+ V + K + + +N L+ G C
Sbjct: 259 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRS 318
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++D+A K M +GF+PDVVSY+ I YC+ + K +EM K P+ +TY+
Sbjct: 319 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 378
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+MH L ++ +A+ ++ +M + +PD Y L+ L K R+ +A + + ++
Sbjct: 379 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 438
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ P++ Y +I C E E A L + P+ TY ++ C++ +
Sbjct: 439 NMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEA 498
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+ L M + S + TY + RG + + + +EM+++G ST +L E
Sbjct: 499 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 558
Query: 521 LEKKRLGNAKERI 533
L L + ++I
Sbjct: 559 LSDDGLDQSVKQI 571
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA + M P + +T + + K + V +M G P++ T I
Sbjct: 40 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++ +++ A V K+ P+ + +++LI L G++ + +F+ M +G
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PNV+TY T+I+ C A++LL+ ME+ C+PD Y ++ C+ +++
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 219
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + M +S TY SL+ L + + + EM++ I+P + + + L
Sbjct: 220 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 279
Query: 522 EKK 524
K+
Sbjct: 280 CKE 282
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
T ST+M L GR DA+ F M G D + +L+D L K ++ A +
Sbjct: 375 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 434
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+E + P QI+ I+I G C+ +++ A+ + +G P+V +YT I C++
Sbjct: 435 IEGSNMDP-DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQG 493
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ EM+ KG P+ TY ++ + + +++ ++M + D S +
Sbjct: 494 LLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTST 553
Query: 376 SLIFILSKAGRVKDANEIFED 396
L+ +LS G + +I +
Sbjct: 554 VLVEMLSDDGLDQSVKQILSE 574
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 71/174 (40%)
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+++AL + +M P + ++ L+ ++K + M G+ PN+ T N
Sbjct: 40 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 99
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I+S C A +L K+ + +P+ T+ L++ C + ++ + L M
Sbjct: 100 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 159
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+ TY +L+ GL + G A M P Y + + L K R
Sbjct: 160 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDR 213
>gi|413932621|gb|AFW67172.1| PHD finger protein [Zea mays]
Length = 1166
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 183/396 (46%), Gaps = 17/396 (4%)
Query: 117 ALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLG---- 172
AL G ++ LV L R + AF FF WA Q GY H P YN ++D+L
Sbjct: 459 ALDALGAELTTPLVADVLHRLRYEEKLAFRFFAWASQQDGYNHEPTTYNDIIDILSGTRY 518
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT 232
KS++F ++ ++ M + V + + I+R A + + +T
Sbjct: 519 KSRQFGVLCNVLDHMKRHGSRSVPVEDLLEILRAYTEKHLTHMRKLAKKRRVRMRTPPET 578
Query: 233 RALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
AL+VL+D K V+ A VF K + +++ ++ L GWC+ R A K ++EM
Sbjct: 579 DALNVLLDAFCKCGMVKEAEAVFGRVKRKLLGNAETYSTLFFGWCRARDPKKAMKVLEEM 638
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG---CKPSVITYTIVMHALGKA 349
Q +P+ +Y I +C + + + M+ +G P+ TY+I++ AL KA
Sbjct: 639 IQMKHTPESFTYVAAIISFCSAGLVSEARELFEFMRTEGLTISSPTAKTYSIMIVALAKA 698
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
++ E ++ M+S C+PD + Y LI + G++ A + ++M + G P+++T+
Sbjct: 699 DRMEECFELLSDMRSCGCMPDVTTYKDLIEGMCLVGKLDAAYRVLDEMGRAGFPPDIVTH 758
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
+ ++AL+L ++M E C+P TY ++ M + M K
Sbjct: 759 R----------KADDALELCERMIEAHCEPSVHTYNMMMMMFFEMGEAHRALDICLEMDK 808
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
TY ++ GL + G+ E A + +E+I++
Sbjct: 809 RRCQRAIDTYEIMIYGLFDCGETEYATALLDEVINR 844
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 99/376 (26%), Positives = 181/376 (48%), Gaps = 16/376 (4%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
SN L A K + G + +YN ++ K+K F ++ + EM + N+ ++
Sbjct: 23 SNQLEKARQLLGRMK-EMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVK-NHCLPTV 80
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T + I+ L + GR DAV+ M+ G + +V+++ L + ++ A K+ E
Sbjct: 81 VTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEE 140
Query: 258 ------FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
F D + +N I G CK +VD+A+K + M +PDVVSYT I
Sbjct: 141 MAVRGYFPDVVT-----YNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGL 192
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C+ D L +M +GC P V+TY+ ++ K ++ A+ + + M C P+
Sbjct: 193 CKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 252
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y+SL+ L + G + A ++ +M+++G P+V++YN I C + A + +
Sbjct: 253 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 312
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M E C P+ +Y+ L++ C+KK + L+ + +D Y L+ GL + G+
Sbjct: 313 MVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGR 372
Query: 492 LELACSFFEEMISKGI 507
+ AC+ F +++ + I
Sbjct: 373 FDEACALFSKVLDEKI 388
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 160/329 (48%), Gaps = 6/329 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++R L R + + A + MK+ G D + L+ K A+K E
Sbjct: 12 TFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEM 71
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
C+P NI + G CK + DA K + EM +G SP++ +Y +E C E+
Sbjct: 72 VKNHCLPTVVTYTNI-VDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERK 130
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ L+EM +G P V+TY + L K +++EA K +M PD Y++
Sbjct: 131 LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTT 187
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L K+G + A+ + + M +G P+V+TY+++I C E E A+ LL M +
Sbjct: 188 VINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLG 247
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C+P+ Y LL R + +L M + + D +Y + + GL ++ +++ A
Sbjct: 248 CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAK 307
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+ F+ M+ +G P S+Y ML E+L KK+
Sbjct: 308 AVFDRMVERGCTPNASSYSMLVEELCKKK 336
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 152/324 (46%), Gaps = 5/324 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ + +T++ L + G D A M G D S L+D KG VE A +
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 241
Query: 257 EFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
C P + +N L+ + + A+ + EM ++GF+PDVVSY I+ C+
Sbjct: 242 SMLKLGCRP-NMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKA 300
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ +K M E+GC P+ +Y++++ L K K++++A+ + E+ + + D Y
Sbjct: 301 ERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLY 360
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVV-PNVLTYNTMISSACARSEEENALKLLQKME 433
+ L+ L K GR +A +F + + + P+V YN M+ S C R + + AL++ ++M
Sbjct: 361 TVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML 420
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E C + T+ L+ C R+ +L M D TY +LV + + GK
Sbjct: 421 ERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSA 479
Query: 494 LACSFFEEMISKGIVPYHSTYKML 517
A FEE + G VP TY L
Sbjct: 480 AALELFEEAVKGGCVPDVVTYSAL 503
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 135/270 (50%), Gaps = 6/270 (2%)
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K C P + F IL+ G C++ +++ A++ + M + G PD Y I Y + KDF
Sbjct: 4 KSCQP-DAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFG 62
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ L EM + C P+V+TYT ++ L KA + +A+K+ ++M+ C P+ Y+ ++
Sbjct: 63 QAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIV 122
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L + ++ +A ++ E+M +G P+V+TYN+ I C + A K L +M
Sbjct: 123 EGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VT 179
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PD +Y ++ C+ + + +L M + D TY+SL+ G + G++E A
Sbjct: 180 PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 239
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKRLGN 528
+ M+ G P Y L L RLG+
Sbjct: 240 LDSMLKLGCRPNMVAYNSLLGALH--RLGH 267
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 6/246 (2%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M + PD ++ + CR K L M+E GC P Y ++ KAK
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+A K +M + CLP Y++++ L KAGR KDA ++ ++M+ +G PN+ TYN
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
++ C + + A K+L++M PD TY +K C+ R+ L M
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---P 177
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
V+ D +Y +++ GL +SG L+ A ++M ++G P TY L + K G E
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCK---GGEVE 234
Query: 532 RINKLL 537
R LL
Sbjct: 235 RAMGLL 240
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 103/458 (22%), Positives = 194/458 (42%), Gaps = 74/458 (16%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
VD+ K L++ +PD V +V N L + S DL A T
Sbjct: 166 VDEARKFLARMPVTPDVVSYT------TVINGLCK------SGDLDSASRML---DQMTN 210
Query: 157 YMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-----VSLATMSTIMRRLVR 209
TP++ Y++++D FC E+ + M L++ ++ ++++ L R
Sbjct: 211 RGCTPDVVTYSSLID------GFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 264
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQ 267
G A + M++ G D + + +D L K V+ A VF + C P +S
Sbjct: 265 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 324
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL-KE 326
+++L+ CK +++DDA +++ ++ D++ YT ++ C+ F + K
Sbjct: 325 -YSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKV 383
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC------------------- 367
+ EK C+P V Y +++ + K +QI++AL+++++M +C
Sbjct: 384 LDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILVHGLCVDDRL 443
Query: 368 ---------------LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
+PD Y +L+ + K G+ A E+FE+ K G VP+V+TY+ +
Sbjct: 444 SDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSAL 503
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
I+ + E A L K++ L YA + L + ++DV
Sbjct: 504 ITGLVHENMAEEAYLLFTKLDVALWNAMILGYA-------ENGSGDLGLKLFVELIESDV 556
Query: 473 SMDAGTYASLVRG-LIESGKLELACSFFEEMISKGIVP 509
+A T+ + G L+++ L A F+ + G P
Sbjct: 557 EPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFP 594
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 125/314 (39%), Gaps = 70/314 (22%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ G Y+ +V+ L K K+ LV++ E V + + ++ L +GGR
Sbjct: 314 VERGCTPNASSYSMLVEELCKKKELDDAITLVEQARE-KYQIVDILLYTVLLDGLCKGGR 372
Query: 213 YDDAVEAF-RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIF 269
+D+A F + + + E D +V++D+ K ++ A ++ + ++C + + +
Sbjct: 373 FDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVT--W 430
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGF-------------------------------- 297
NIL+HG C ++ DA+ + M +GF
Sbjct: 431 NILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVK 490
Query: 298 ---SPDVVSYTCFIEHYCREKD-------FRKVDDTL---------------------KE 326
PDVV+Y+ I E F K+D L E
Sbjct: 491 GGCVPDVVTYSALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVE 550
Query: 327 MQEKGCKPSVITYTI-VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
+ E +P+ T+ + L KA+ + +A ++++ PD ++LI + +K G
Sbjct: 551 LIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVFAKCG 610
Query: 386 RVKDANEIFEDMKK 399
+++A IF MK+
Sbjct: 611 DLEEARRIFYSMKQ 624
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 139/272 (51%), Gaps = 1/272 (0%)
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+ + LI+ +C + +++ + + + GF+PD +YT F+ YCR
Sbjct: 73 RTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVL 132
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M +GC + TYT ++H L A + EA+ V+ M++D C PD Y++++ L AGR
Sbjct: 133 MPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGR 192
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
++A + D +G PNV+ YN +I C + E A+ + ++M+ + C P+ TY
Sbjct: 193 TREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTE 252
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+ C+ +++ L + M + + TY +L++G G+L+ A + M + G
Sbjct: 253 LISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSG 312
Query: 507 IVPYHSTYKMLEEKLEK-KRLGNAKERINKLL 537
+VP T +L + L K +R+G A+ + L+
Sbjct: 313 LVPNEWTCSVLIDALCKHERVGEAQLLLGSLI 344
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 155/341 (45%), Gaps = 4/341 (1%)
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSS 266
R G A F M G + + L+ L V A VF ++ C P
Sbjct: 119 RAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAP-DP 177
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
++ ++HG C + +A+ + + +GF P+VV Y I+ YC D D +
Sbjct: 178 HVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFER 237
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M GC P+V TYT ++ K+++++ A+ ++ +M +P+ Y++LI G+
Sbjct: 238 MDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQ 297
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ A + + M+ G+VPN T + +I + C A LL + + K + Y
Sbjct: 298 LDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTS 357
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+ C+ R + L+ + DA TY+SL+ GL +L A ++M+ KG
Sbjct: 358 LIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKG 417
Query: 507 IVPYHSTYKMLEEKLEKKRLGNAKERI-NKLLAHAKEQKTF 546
+ P TY ++ ++L ++ + ++I +K++A + F
Sbjct: 418 VQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVF 458
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/365 (26%), Positives = 155/365 (42%), Gaps = 38/365 (10%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEF 258
+T++ L GR +A G E + + L+D +E A VF ++
Sbjct: 181 ATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDV 240
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
C P + + + LI G+CK+RK+D A M G P+VV+YT I+ C +
Sbjct: 241 NGCSP-NVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLD 299
Query: 319 KVDDTLKEMQ-----------------------------------EKGCKPSVITYTIVM 343
L+ M+ +KG K + I YT ++
Sbjct: 300 CAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLI 359
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
L KA + A ++ + + S +PD YSSLI L + + +A + +DM ++GV
Sbjct: 360 DGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQ 419
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P+ +TY +I + + K+L KM KPD TY ++ C + RM+ +
Sbjct: 420 PSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHM 479
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ HM + V + TY +L+ G G A S F+ M++ G P +Y +L L K
Sbjct: 480 MLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIK 539
Query: 524 KRLGN 528
K N
Sbjct: 540 KESSN 544
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/344 (22%), Positives = 151/344 (43%), Gaps = 2/344 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE- 257
T + ++ L G +A+ F GM+ G D + ++ L A + +
Sbjct: 144 TYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDA 203
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ + ++N LI G+C ++ A + M G SP+V +YT I +C+ +
Sbjct: 204 MAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKL 263
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ M + G P+V+TYT ++ Q++ A ++ + M++ +P+ S L
Sbjct: 264 DRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVL 323
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L K RV +A + + ++G+ N + Y ++I C A +L+Q +
Sbjct: 324 IDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGF 383
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD TY+ L+ CR+K + +L M + V TY ++ L+ + +
Sbjct: 384 VPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKK 443
Query: 498 FFEEMISKGIVPYHSTYKM-LEEKLEKKRLGNAKERINKLLAHA 540
++MI+ GI P TY + + + R+ +A+ + ++ H
Sbjct: 444 ILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHG 487
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/322 (21%), Positives = 135/322 (41%), Gaps = 17/322 (5%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
++++ L + GR+ A + + G D S L+D L + + A V + +
Sbjct: 356 TSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMME 415
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ S + I+I + D ++K + +M G PDV +YT F+ YC E
Sbjct: 416 KGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMED 475
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ + M + G P+++TY ++ ++A ++ M ++ C P+ Y+ L+
Sbjct: 476 AEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLR 535
Query: 380 ILSK----------------AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
+L K +K + + E+M K + + YN ++S C +
Sbjct: 536 LLIKKESSNNIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLD 595
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A LL +M+ P + Y ++ CCR K + + M K+ +Y ++
Sbjct: 596 EAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHII 655
Query: 484 RGLIESGKLELACSFFEEMISK 505
L E G ++ A F +M+SK
Sbjct: 656 SSLCEEGSIQTAKQVFGDMLSK 677
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/429 (21%), Positives = 167/429 (38%), Gaps = 56/429 (13%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y ++ KS+K L M ++ G V ++ T + +++ G+ D A +
Sbjct: 250 YTELISGFCKSRKLDRAMMLFSRM--VDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQS 307
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M+ G+ + SVL+D L K V A + + I ++ ++ LI G CK +
Sbjct: 308 MENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGR 367
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS------ 335
A + M+ + QGF PD +Y+ I+ CR+K+ + L +M EKG +PS
Sbjct: 368 FAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTI 427
Query: 336 -----------------------------VITYTIVMHALGKAKQINEALKVYEKMKSDD 366
V TYTI + + ++ +A + M
Sbjct: 428 IIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHG 487
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA- 425
P+ Y++LI + G A F+ M G PN +Y ++ + N
Sbjct: 488 VCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIP 547
Query: 426 -----------LKLLQKMEEDLCK----PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+K L + E++ K + + Y L CR R+ LL M
Sbjct: 548 ANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSA 607
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNA 529
+++ Y S++ L A +F + M+ G +P +Y+ + L E+ + A
Sbjct: 608 NLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTA 667
Query: 530 KERINKLLA 538
K+ +L+
Sbjct: 668 KQVFGDMLS 676
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/237 (22%), Positives = 91/237 (38%), Gaps = 18/237 (7%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
G A F+ M G + + + +VL+ L+K S + IP +S
Sbjct: 506 GLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNN-----------IPANS---- 550
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+ W K ++ ++EM + ++ Y CF+ CR + L EMQ
Sbjct: 551 --VSIW-KIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSA 607
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
PS YT ++ + K + EAL + M +P Y +I L + G ++ A
Sbjct: 608 NLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTA 667
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
++F DM + + + +I + LL MEE +P YA L
Sbjct: 668 KQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARL 724
>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 624
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 186/374 (49%), Gaps = 12/374 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA---------TMSTIMRRLVRGGRYD 214
YN ++ L +K++ + EL+ EM +++ +A +TI+ + + G ++
Sbjct: 224 YNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHE 283
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNIL 272
A E M YG++ + + ++ + + E A ++ E K+C PL FNIL
Sbjct: 284 VANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNC-PLDDVTFNIL 342
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+ +C+ VD + +++M + G PDV++YT I +C+E + LK M GC
Sbjct: 343 VDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGC 402
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
KP+ I+YTIV+ L ++ +A ++ +M CLP+ ++++I L K G V+ A E
Sbjct: 403 KPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIE 462
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ + M G P++++Y+T+I + E AL+LL M P+ TY+ +
Sbjct: 463 LLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALA 522
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
R+ R+ + + ++ + DA Y +++ L + + +LA F M+S G +P S
Sbjct: 523 REGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNES 582
Query: 513 TYKMLEEKLEKKRL 526
TY L + L + L
Sbjct: 583 TYTALIKGLASEGL 596
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/337 (23%), Positives = 139/337 (41%), Gaps = 15/337 (4%)
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
+S ++R L GR DAV A D A+ + + VE A ++
Sbjct: 55 LSALIRSLCVAGRTADAVRALDAAGNAAGVVDYNAM---VAGYCRVGQVEAARRLAAAVP 111
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+P ++ + ++ G C ++ DA + EM + P Y IE CR +
Sbjct: 112 --VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYSS 169
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
L+ + KG +V++A+ ++E L++ K+ C D Y++++
Sbjct: 170 ALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLK 229
Query: 380 ILSKAGRVKDANEIFEDMKK----------QGVVPNVLTYNTMISSACARSEEENALKLL 429
L A R D E+ ++M K G P++ Y T+I C E A ++L
Sbjct: 230 GLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEIL 289
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M KP+ Y +LK C R + LLT M++ + +D T+ LV ++
Sbjct: 290 SRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFCQN 349
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
G ++ E+M+ G +P TY + K+ L
Sbjct: 350 GLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGL 386
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 2/175 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q G + P +NT+++ L K EL+K+M +N L + ST++ L + G+
Sbjct: 434 QQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQM-LVNGCNPDLISYSTVIDGLGKAGKT 492
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNIL 272
++A+E M G+ + S + L + ++ ++F +D I + ++N +
Sbjct: 493 EEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAV 552
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
I CK R+ D A + M G P+ +YT I+ E + D L E+
Sbjct: 553 ISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSEL 607
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 146/268 (54%), Gaps = 2/268 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N LI G C + +A + EM ++ PDVV+YT +E C+ +++ L EM+
Sbjct: 35 YNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMR 94
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+KGC P ++TY +V++ + + ++++A++ + + S C P+T Y+ ++ L A R +
Sbjct: 95 DKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWE 154
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
DA E+ +M ++G PNV+T+N +IS C + E AL++L+++ + C P+ +Y PLL
Sbjct: 155 DAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLL 214
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C++K+M L M D +Y +L+ L SG++++A ++ KG
Sbjct: 215 HAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCA 274
Query: 509 PYHSTYKMLEEKLEKKRLGNAKERINKL 536
P +Y + + L K G KE + L
Sbjct: 275 PVLISYNTVIDGLTKA--GKTKEALELL 300
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 105/418 (25%), Positives = 191/418 (45%), Gaps = 43/418 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN MV + + LV EM + Y T +T++R L GR +A+ M
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEMPVEPDAY----TYNTLIRGLCGRGRTANALAVLDEM 58
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
+ D ++L++ K + + A K+ E +D C P +N++++G C+ +
Sbjct: 59 LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTP-DIVTYNVVVNGICQEGR 117
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT--- 338
VDDA + +K + G P+ VSY ++ C + + ++ + EM +KGC P+V+T
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 339 --------------------------------YTIVMHALGKAKQINEALKVYEKMKSDD 366
Y ++HA K K++++A+ + M S
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C PD Y++L+ L ++G V A E+ +K +G P +++YNT+I + + AL
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+LL +M +PD TY+ + CR+ R++ + + + Y +++ GL
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL-GNAKERINKLLAHAKEQ 543
+ + A F MI G +P STY +L E L + L A++ +++L + A E+
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEE 415
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/339 (27%), Positives = 171/339 (50%), Gaps = 9/339 (2%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T + ++++L GR EA R + G D A + +M V+ A + E
Sbjct: 99 GTCAALIKKLSASGR---TAEARRVLAACG--PDVMAYNAMMAGYCGAGQVDAARRWCAE 153
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ + + LI G C + +A + EM ++ PDVV+YT +E C+ +
Sbjct: 154 RA--VERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGY 211
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
++ L EM++KGC P ++TY +V++ + + ++++A++ + + S C P+T Y+ +
Sbjct: 212 KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 271
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ L A R +DA E+ +M ++G PNV+T+N +IS C + E AL++L+++ + C
Sbjct: 272 LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 331
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P+ +Y PLL C++K+M L M D +Y +L+ L SG++++A
Sbjct: 332 SPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 391
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
++ KG P +Y + + L K G KE + L
Sbjct: 392 LLHQLKDKGCAPVLISYNTVIDGLTKA--GKTKEALELL 428
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 179/330 (54%), Gaps = 7/330 (2%)
Query: 182 ELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+ +K +DE+ + + + T + ++ + + GR DDA+E + + YG E +T + ++++
Sbjct: 213 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 272
Query: 240 DTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
L E A ++ E K C P + FN+LI C+ V+ A + ++++ + G
Sbjct: 273 KGLCTAERWEDAEELMGEMGQKGCPP-NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 331
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
SP+ +SY + +C++K K L M +GC P +++Y ++ AL ++ +++ A++
Sbjct: 332 SPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 391
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ ++K C P Y+++I L+KAG+ K+A E+ +M +G+ P+++TY+T+ + C
Sbjct: 392 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 451
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETY-APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
E+A++ K+++ +P+ Y A +L +C R++ ++ L +M N +
Sbjct: 452 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAID-LFAYMIGNGCMPNE 510
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKG 506
TY L+ GL G ++ A +E+ S+G
Sbjct: 511 STYTILIEGLAYEGLIKEARDLLDELCSRG 540
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/382 (24%), Positives = 177/382 (46%), Gaps = 39/382 (10%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T T++R L GR +A+ M + D ++L++ K + + A K+ E
Sbjct: 162 TCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEM 221
Query: 259 KD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+D C P +N++++G C+ +VDDA + +K + G P+ VSY ++ C +
Sbjct: 222 RDKGCTP-DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAER 280
Query: 317 FRKVDDTLKEMQEKGCKPSVIT-----------------------------------YTI 341
+ ++ + EM +KGC P+V+T Y
Sbjct: 281 WEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNP 340
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++HA K K++++A+ + M S C PD Y++L+ L ++G V A E+ +K +G
Sbjct: 341 LLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKG 400
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P +++YNT+I + + AL+LL +M +PD TY+ + CR+ R++
Sbjct: 401 CAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAI 460
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ + + Y +++ GL + + A F MI G +P STY +L E L
Sbjct: 461 RAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGL 520
Query: 522 EKKRL-GNAKERINKLLAHAKE 542
+ L A++ +++L + +E
Sbjct: 521 AYEGLIKEARDLLDELCSRGEE 542
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 146/308 (47%), Gaps = 9/308 (2%)
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGW 276
A R + VE+D L+ L +A V E + C+P + IL+
Sbjct: 147 ARRWCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVP-DVVTYTILLEAT 205
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT---LKEMQEKGCK 333
CK A K + EM +G +PD+V+Y + C+E +VDD LK + GC+
Sbjct: 206 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEG---RVDDAIEFLKNLPSYGCE 262
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ ++Y IV+ L A++ +A ++ +M C P+ ++ LI L + G V+ A E+
Sbjct: 263 PNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEV 322
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
E + K G PN L+YN ++ + C + + + A+ L M C PD +Y LL CR
Sbjct: 323 LEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCR 382
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+ V LL + + +Y +++ GL ++GK + A EM+SKG+ P T
Sbjct: 383 SGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIIT 442
Query: 514 YKMLEEKL 521
Y + L
Sbjct: 443 YSTIAAGL 450
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 20/362 (5%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA--Y 252
++L T + +R L GR +AV GM+ Y V D + L+ L K + + A Y
Sbjct: 219 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 277
Query: 253 KVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ + C+P +N +I G+CK V +A + +K+ +GF PD V+Y I C
Sbjct: 278 LRRMMNQGCLP-DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLC 336
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
E D + + E Q KG KP ++ Y ++ L I AL+V +M + C PD
Sbjct: 337 AEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ 396
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+ +I L K G + DA + D +G +P+V T+NT+I C R + ++AL+L+++M
Sbjct: 397 TYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 456
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
E PD TY +L C+ ++ +N M + TY L+ S K+
Sbjct: 457 WEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKM 516
Query: 493 ELACSFFEEMISKGIVPYHSTYK----------------MLEEKLEKKRLGNAKERINKL 536
E A +M +G+ P ++ +L +KLE+K + N L
Sbjct: 517 EEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTL 576
Query: 537 LA 538
+
Sbjct: 577 IG 578
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 175/358 (48%), Gaps = 14/358 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++D K EL+K D + G+V T +++ L G + A+E F
Sbjct: 293 YNTIIDGYCKISMVQEATELLK--DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 350
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVE----HAYKVFLEFKD--CIPLSSQIFNILIHGW 276
+ G++ D V+ ++LVKG ++ HA +V E + C P Q +NI+I+G
Sbjct: 351 AQAKGIKPDI----VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP-DIQTYNIVINGL 405
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK + DA M + +G+ PDV ++ I+ YC+ ++ M E G P
Sbjct: 406 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 465
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
ITY V++ L KA ++NE + +++M C P+ Y+ LI ++ ++++A+++
Sbjct: 466 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 525
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M ++G+ P+ +++NT+I C + E A L QK+EE +T+ L+ K
Sbjct: 526 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 585
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
M + + M D+ TY L+ G ++ ++ A EMI KG +P ST+
Sbjct: 586 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 643
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 150/315 (47%), Gaps = 3/315 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ +++++ L G A++ M + G D + +++++ L K ++ A V
Sbjct: 360 IVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMN 419
Query: 257 E--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ K +P FN LI G+CK K+D A + ++ M++ G +PD ++Y + C+
Sbjct: 420 DAIMKGYLP-DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 478
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+V++T +EM KGC P+ ITY I++ ++ ++ EA KV KM + PD +
Sbjct: 479 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 538
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI+ + G ++ A +F+ ++++G T+NT+I + + A K+ +M
Sbjct: 539 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 598
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+ D TY L+ C+ + L M K T+ ++ L + ++
Sbjct: 599 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 658
Query: 495 ACSFFEEMISKGIVP 509
A M+ G+VP
Sbjct: 659 AVGIIHIMVKIGVVP 673
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 143/322 (44%), Gaps = 12/322 (3%)
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCI 262
+R R GR DAV+AF M + A + +MD LV + A+KV++ +
Sbjct: 57 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 116
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY---TCFIEHYCREKDFRK 319
I + +C T + A + ++ + +G V+Y C + + D R+
Sbjct: 117 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQ 172
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ D +M P++ + V+HAL K + EA + K+ + Y+ I
Sbjct: 173 LFD---QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 229
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L +AGR+ +A + + M+ VP+V+TYNT+I C +S + A+ L++M C P
Sbjct: 230 GLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLP 288
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY ++ C+ ++ LL D TY SL+ GL G +E A F
Sbjct: 289 DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELF 348
Query: 500 EEMISKGIVPYHSTYKMLEEKL 521
E +KGI P Y L + L
Sbjct: 349 NEAQAKGIKPDIVVYNSLVKGL 370
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 117/253 (46%), Gaps = 2/253 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY+ +NT++D K K +LV+ M E ++ T ++++ L + G+ ++
Sbjct: 425 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI-TYNSVLNGLCKAGKVNE 483
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIH 274
E F+ M G + ++L++ + N +E A KV ++ ++ + + FN LI+
Sbjct: 484 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 543
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C+ ++ A +++ ++G+S ++ I + + + + EM KG +
Sbjct: 544 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 603
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
TY +++ K ++ A +M +P S + +I L+ RV A I
Sbjct: 604 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 663
Query: 395 EDMKKQGVVPNVL 407
M K GVVP V+
Sbjct: 664 HIMVKIGVVPEVV 676
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 96/245 (39%), Gaps = 32/245 (13%)
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y I Y R R D + M C P+ Y +M AL A ++A KVY +M
Sbjct: 53 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112
Query: 364 SDDCLPDT--------SF-----------------------YSSLIFILSKAGRVKDANE 392
+ PD SF Y +++ L G DA +
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 172
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+F+ M V PN+ +N ++ + C R + A LL K+ + + TY ++ C
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
R+ L+ M V D TY +L+RGL + + A + M+++G +P
Sbjct: 233 EAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 291
Query: 513 TYKML 517
TY +
Sbjct: 292 TYNTI 296
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 32/219 (14%)
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y + A +A ++ +A+ +E+M C P Y++++ L A A++++ M
Sbjct: 53 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE----DLCKPDCETYA--------- 445
GV P++ T+ + S C + AL+LL+ + C C YA
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 172
Query: 446 ------------------PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+L C++ + LL + + +S++ TY +RGL
Sbjct: 173 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 232
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
E+G+L A + M + VP TY L L KK +
Sbjct: 233 EAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSM 270
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/380 (26%), Positives = 183/380 (48%), Gaps = 19/380 (5%)
Query: 157 YMHTPEM---YNTMVDVLGKSKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVRG 210
+MH P + ++ + K K + + L +MD N Y T++ ++
Sbjct: 61 HMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY----TLNILINSFCHL 116
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY-KVFLEFKDCIPLSSQ-- 267
R A + K G + + +TL++G VE +V F I Q
Sbjct: 117 QRLGFAFSVLAKILKLGHQPNIATF----NTLIRGLCVEGKIGEVLHLFDKMIGEGFQPN 172
Query: 268 --IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+ LI+G CK A + ++ M Q PDVV YT I+ C+++ + +
Sbjct: 173 VVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFS 232
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM +G PS+ TY ++HAL + + +M + +P+ +S+++ L K G
Sbjct: 233 EMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEG 292
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+V +A+++ + M K+GV PNV+TYN ++ C RSE + A+K+ M PD +Y+
Sbjct: 293 KVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYS 352
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ C+ +R++ +L M + ++ + TY++L+ GL G+L+ A + F EM+++
Sbjct: 353 TLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTR 412
Query: 506 GIVPYHSTYKMLEEKLEKKR 525
G +P +Y +L + L K R
Sbjct: 413 GQIPDFVSYCILLDYLCKNR 432
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 184/412 (44%), Gaps = 40/412 (9%)
Query: 144 AFGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMS 201
F F AK + G+ +NT++ L K + L +M + G+ ++ T
Sbjct: 120 GFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM--IGEGFQPNVVTYG 177
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF------ 255
T++ L + G A+ R M++ + D + ++D+L K V A+ +F
Sbjct: 178 TLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQ 237
Query: 256 -------------------LEFKDCIPLSSQ-----------IFNILIHGWCKTRKVDDA 285
E+K L ++ IF+ ++ CK KV +A
Sbjct: 238 GISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEA 297
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ M ++G P+VV+Y ++ +C + + M KG P V++Y+ +++
Sbjct: 298 HDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLING 357
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K ++I +A+ ++E+M + +P+T YS+L+ L GR++DA +F +M +G +P+
Sbjct: 358 YCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPD 417
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
++Y ++ C + A+ LL+ +E PD + Y ++ CR ++ L +
Sbjct: 418 FVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFS 477
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ + + TY ++ GL + G L A F EM KG P TY ++
Sbjct: 478 NLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLI 529
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/373 (23%), Positives = 168/373 (45%), Gaps = 4/373 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
+Y +++D L K ++ + L EM ++ G S+ T ++++ L +
Sbjct: 210 VYTSIIDSLCKDRQVTQAFNLFSEM--IHQGISPSIFTYNSLIHALCNLCEWKHVTALLN 267
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTR 280
M + + S ++D L K V A+ V + K + + +N L+ G C
Sbjct: 268 EMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRS 327
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++D+A K M +GF+PDVVSY+ I YC+ + K +EM K P+ +TY+
Sbjct: 328 EMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYS 387
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+MH L ++ +A+ ++ +M + +PD Y L+ L K R+ +A + + ++
Sbjct: 388 TLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGS 447
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ P++ Y +I C E E A L + P+ TY ++ C++ +
Sbjct: 448 NMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEA 507
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+ L M + S + TY + RG + + + +EM+++G ST +L E
Sbjct: 508 SKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEM 567
Query: 521 LEKKRLGNAKERI 533
L L + ++I
Sbjct: 568 LSDDGLDQSVKQI 580
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 112/243 (46%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA + M P + +T + + K + V +M G P++ T I
Sbjct: 49 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++ +++ A V K+ P+ + +++LI L G++ + +F+ M +G
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PNV+TY T+I+ C A++LL+ ME+ C+PD Y ++ C+ +++
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAF 228
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + M +S TY SL+ L + + + EM++ I+P + + + L
Sbjct: 229 NLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDAL 288
Query: 522 EKK 524
K+
Sbjct: 289 CKE 291
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 91/201 (45%), Gaps = 3/201 (1%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
T ST+M L GR DA+ F M G D + +L+D L K ++ A +
Sbjct: 384 VTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKA 443
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+E + P QI+ I+I G C+ +++ A+ + +G P+V +YT I C++
Sbjct: 444 IEGSNMDP-DIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQG 502
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ EM+ KG P+ TY ++ + + +++ ++M + D S +
Sbjct: 503 LLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFSADVSTST 562
Query: 376 SLIFILSKAGRVKDANEIFED 396
L+ +LS G + +I +
Sbjct: 563 VLVEMLSDDGLDQSVKQILSE 583
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/174 (21%), Positives = 71/174 (40%)
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+++AL + +M P + ++ L+ ++K + M G+ PN+ T N
Sbjct: 49 LDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNI 108
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I+S C A +L K+ + +P+ T+ L++ C + ++ + L M
Sbjct: 109 LINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG 168
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+ TY +L+ GL + G A M P Y + + L K R
Sbjct: 169 FQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDR 222
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 93/314 (29%), Positives = 156/314 (49%), Gaps = 8/314 (2%)
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG----NSVEHAYKVF 255
M I R R G Y +++ M + G D +L L+KG +V A +V
Sbjct: 88 MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDV----ILCTKLIKGFFTLRNVPKAVRVM 143
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ +N LI+G+CK ++DDA + + M + FSPD V+Y I C
Sbjct: 144 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 203
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
L ++ C+P+VITYTI++ A ++EALK+ ++M S PD Y+
Sbjct: 204 KLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYN 263
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
++I + K G V A E+ +++ +G P+V++YN ++ + + + E KL+ KM +
Sbjct: 264 TIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 323
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C P+ TY+ L+ CR +++ LL M + ++ DA +Y L+ G+L++A
Sbjct: 324 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 383
Query: 496 CSFFEEMISKGIVP 509
F E MIS G +P
Sbjct: 384 IEFLETMISDGCLP 397
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 184/384 (47%), Gaps = 15/384 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDEL--NNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YN M+ L K L +K +D+L +N ++ T + ++ + G D+A++
Sbjct: 192 YNIMIGSLCSRGKLDLA---LKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLD 248
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKT 279
M G++ D + ++ + K V+ A+++ LE K C P +NIL+
Sbjct: 249 EMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEP-DVISYNILLRALLNQ 307
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
K ++ +K M +MF + P+VV+Y+ I CR+ + + LK M+EKG P +Y
Sbjct: 308 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 367
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ A + +++ A++ E M SD CLPD Y++++ L K G+ A EIF + +
Sbjct: 368 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 427
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G PN +YNTM S+ + ++ AL ++ +M + PD TY ++ CR+ +
Sbjct: 428 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDK 487
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
LL M + TY ++ G ++ ++E A + M+ G P +TY +L E
Sbjct: 488 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIE 547
Query: 520 KL-------EKKRLGNAKERINKL 536
+ E L N RIN +
Sbjct: 548 GIGFAGYRAEAMELANDLVRINAI 571
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 138/288 (47%), Gaps = 1/288 (0%)
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+DT+ L + + GN +E + + + + LI G+ R V A + M
Sbjct: 84 RDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM 143
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
E+ ++ PDV +Y I +C+ L M+ K P +TY I++ +L
Sbjct: 144 -EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 202
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+++ ALKV +++ SD+C P Y+ LI G V +A ++ ++M +G+ P++ TY
Sbjct: 203 GKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTY 262
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
NT+I C + A ++++ +E C+PD +Y LL+ + + + L+T MF
Sbjct: 263 NTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 322
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ TY+ L+ L GK+E A + + M KG+ P +Y L
Sbjct: 323 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 370
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 1/137 (0%)
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
++G ++ + E M ++G P+V+ +I A+++++ +E+ +PD
Sbjct: 97 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEK-FGQPDVF 155
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y L+ C+ R+ +L M D S D TY ++ L GKL+LA +++
Sbjct: 156 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQL 215
Query: 503 ISKGIVPYHSTYKMLEE 519
+S P TY +L E
Sbjct: 216 LSDNCQPTVITYTILIE 232
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 101/362 (27%), Positives = 166/362 (45%), Gaps = 20/362 (5%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA--Y 252
++L T + +R L GR +AV GM+ Y V D + L+ L K + + A Y
Sbjct: 220 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 278
Query: 253 KVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ + C+P +N +I G+CK V +A + +K+ +GF PD V+Y I C
Sbjct: 279 LRRMMNQGCLP-DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLC 337
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
E D + + E Q KG KP ++ Y ++ L I AL+V +M + C PD
Sbjct: 338 AEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ 397
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+ +I L K G + DA + D +G +P+V T+NT+I C R + ++AL+L+++M
Sbjct: 398 TYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 457
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
E PD TY +L C+ ++ +N M + TY L+ S K+
Sbjct: 458 WEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKM 517
Query: 493 ELACSFFEEMISKGIVPYHSTYK----------------MLEEKLEKKRLGNAKERINKL 536
E A +M +G+ P ++ +L +KLE+K + N L
Sbjct: 518 EEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTL 577
Query: 537 LA 538
+
Sbjct: 578 IG 579
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 175/358 (48%), Gaps = 14/358 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++D K EL+K D + G+V T +++ L G + A+E F
Sbjct: 294 YNTIIDGYCKISMVQEATELLK--DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 351
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVE----HAYKVFLEFKD--CIPLSSQIFNILIHGW 276
+ G++ D V+ ++LVKG ++ HA +V E + C P Q +NI+I+G
Sbjct: 352 AQAKGIKPDI----VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP-DIQTYNIVINGL 406
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK + DA M + +G+ PDV ++ I+ YC+ ++ M E G P
Sbjct: 407 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 466
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
ITY V++ L KA ++NE + +++M C P+ Y+ LI ++ ++++A+++
Sbjct: 467 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 526
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M ++G+ P+ +++NT+I C + E A L QK+EE +T+ L+ K
Sbjct: 527 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 586
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
M + + M D+ TY L+ G ++ ++ A EMI KG +P ST+
Sbjct: 587 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 644
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 150/315 (47%), Gaps = 3/315 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ +++++ L G A++ M + G D + +++++ L K ++ A V
Sbjct: 361 IVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMN 420
Query: 257 E--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ K +P FN LI G+CK K+D A + ++ M++ G +PD ++Y + C+
Sbjct: 421 DAIMKGYLP-DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 479
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+V++T +EM KGC P+ ITY I++ ++ ++ EA KV KM + PD +
Sbjct: 480 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 539
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI+ + G ++ A +F+ ++++G T+NT+I + + A K+ +M
Sbjct: 540 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 599
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+ D TY L+ C+ + L M K T+ ++ L + ++
Sbjct: 600 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 659
Query: 495 ACSFFEEMISKGIVP 509
A M+ G+VP
Sbjct: 660 AVGIIHIMVKIGVVP 674
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 143/322 (44%), Gaps = 12/322 (3%)
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCI 262
+R R GR DAV+AF M + A + +MD LV + A+KV++ +
Sbjct: 58 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 117
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY---TCFIEHYCREKDFRK 319
I + +C T + A + ++ + +G V+Y C + + D R+
Sbjct: 118 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQ 173
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ D +M P++ + V+HAL K + EA + K+ + Y+ I
Sbjct: 174 LFD---QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 230
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L +AGR+ +A + + M+ VP+V+TYNT+I C +S + A+ L++M C P
Sbjct: 231 GLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLP 289
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY ++ C+ ++ LL D TY SL+ GL G +E A F
Sbjct: 290 DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELF 349
Query: 500 EEMISKGIVPYHSTYKMLEEKL 521
E +KGI P Y L + L
Sbjct: 350 NEAQAKGIKPDIVVYNSLVKGL 371
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 117/253 (46%), Gaps = 2/253 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY+ +NT++D K K +LV+ M E ++ T ++++ L + G+ ++
Sbjct: 426 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI-TYNSVLNGLCKAGKVNE 484
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIH 274
E F+ M G + ++L++ + N +E A KV ++ ++ + + FN LI+
Sbjct: 485 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 544
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C+ ++ A +++ ++G+S ++ I + + + + EM KG +
Sbjct: 545 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 604
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
TY +++ K ++ A +M +P S + +I L+ RV A I
Sbjct: 605 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 664
Query: 395 EDMKKQGVVPNVL 407
M K GVVP V+
Sbjct: 665 HIMVKIGVVPEVV 677
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 96/245 (39%), Gaps = 32/245 (13%)
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y I Y R R D + M C P+ Y +M AL A ++A KVY +M
Sbjct: 54 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113
Query: 364 SDDCLPDT--------SF-----------------------YSSLIFILSKAGRVKDANE 392
+ PD SF Y +++ L G DA +
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 173
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+F+ M V PN+ +N ++ + C R + A LL K+ + + TY ++ C
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
R+ L+ M V D TY +L+RGL + + A + M+++G +P
Sbjct: 234 EAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDF 292
Query: 513 TYKML 517
TY +
Sbjct: 293 TYNTI 297
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 32/219 (14%)
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y + A +A ++ +A+ +E+M C P Y++++ L A A++++ M
Sbjct: 54 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE----DLCKPDCETYA--------- 445
GV P++ T+ + S C + AL+LL+ + C C YA
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 173
Query: 446 ------------------PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+L C++ + LL + + +S++ TY +RGL
Sbjct: 174 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 233
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
E+G+L A + M + VP TY L L KK +
Sbjct: 234 EAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSM 271
>gi|242038267|ref|XP_002466528.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
gi|241920382|gb|EER93526.1| hypothetical protein SORBIDRAFT_01g009420 [Sorghum bicolor]
Length = 595
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 100/430 (23%), Positives = 195/430 (45%), Gaps = 17/430 (3%)
Query: 102 KILSKQYQSPDKVVEALKGCGVSVSNS-LVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHT 160
++L + + P ++ AL G+ S+ L++ LRR + A FF W
Sbjct: 32 RLLRRHHSDPQRLAAALSASGLDASSPHLLDAVLRRCGAASSLALHFFHWCSPSLPSPLP 91
Query: 161 PEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
+ KS + L + + + + ++RRL + A+
Sbjct: 92 SSLALLA-----KSFSRASSAPSPSLLAPLPSQLLGPSLLCPVLRRLPQPRLLPFALSLL 146
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTR 280
+ L+++L K V A ++ E + PLS + + L++GWC+
Sbjct: 147 SARPDH---DQPALFLSLLESLSKAGHVVTAEQLVEEPQTRFPLSLRHYTALLYGWCRQG 203
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+D+A+ + M + DVV++ + + + F + +M+++GC P+ ++YT
Sbjct: 204 KLDEAKHVLARMKAADVALDVVAFNTLLAGFVADGRFEDAFELTGQMEQRGCPPNAVSYT 263
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ LG +++EA++V+ +M+ C PD Y +L+ KAG++ E + + +
Sbjct: 264 TLIQGLGARGRVDEAMRVFVEMRRKGCAPDAVTYGTLVSTFCKAGKISQGYEFLDAISRD 323
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ + Y+ + + + E L+L+++M E C PD + Y ++++ CR K
Sbjct: 324 GLRVDAAVYHGFFVAHEKKEQLEECLELMERMRECRCPPDLKIYNVVIRLACRLGETKQA 383
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG--IVPYHSTYKML- 517
L M +S T+A +V GL+ G L ACS+F++M+ +G + P + K L
Sbjct: 384 MSLWNEMETGGLSPGVDTFAIMVNGLVGQGLLVEACSYFKDMVGRGLFVAPQYGVLKDLL 443
Query: 518 -----EEKLE 522
+EKLE
Sbjct: 444 NALVRDEKLE 453
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 126/290 (43%), Gaps = 6/290 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++ +F +EL +M++ + + +T+++ L GR D+A+ F M
Sbjct: 227 FNTLLAGFVADGRFEDAFELTGQMEQ-RGCPPNAVSYTTLIQGLGARGRVDEAMRVFVEM 285
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
++ G D L+ T K + Y+ FL+ +D + + + +++ K +
Sbjct: 286 RRKGCAPDAVTYGTLVSTFCKAGKISQGYE-FLDAISRDGLRVDAAVYHGFFVAHEKKEQ 344
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+++ + M+ M + PD+ Y I CR + ++ EM+ G P V T+ I
Sbjct: 345 LEECLELMERMRECRCPPDLKIYNVVIRLACRLGETKQAMSLWNEMETGGLSPGVDTFAI 404
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCL--PDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+++ L + EA ++ M P L+ L + +++ A +++E +
Sbjct: 405 MVNGLVGQGLLVEACSYFKDMVGRGLFVAPQYGVLKDLLNALVRDEKLELAKDVWECIAS 464
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
+G NV + I + A+ + A M E P +T+A L+K
Sbjct: 465 KGCELNVSAWTIWIHALYAKKHVKEACLYCLDMLEAGVMPQPDTFAKLMK 514
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 108/381 (28%), Positives = 176/381 (46%), Gaps = 23/381 (6%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDE--LNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YN M+D S ++ L++EM E +N V T S ++ V+ ++ +A E +
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVV---TYSALINAYVKERKFFEAEELYD 343
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKT 279
M G+ +T + ++D K N ++ A +F + K C P FN LI G+C
Sbjct: 344 EMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSP-DVFTFNTLIDGYCGA 402
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+++DD + + EM + G D +Y I +C D D ++M G P ++T
Sbjct: 403 KRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 462
Query: 340 TIVMHAL---GKAKQINEALKVYEKMKSD--------DCLPDTSFYSSLIFILSKAGRVK 388
++ L GK K E K +K K D PD Y+ LI L G+
Sbjct: 463 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFL 522
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A E++++M +G+VPN +TY++MI+ C +S + A ++ M PD T+ L+
Sbjct: 523 EAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLV 582
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+ R+ L M + + DA TY +L+ G + G + A F+EMIS G+
Sbjct: 583 SGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVY 642
Query: 509 P----YHSTYKMLEEKLEKKR 525
P S +L K E KR
Sbjct: 643 PDTITIRSMLTVLWSKEELKR 663
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 170/361 (47%), Gaps = 8/361 (2%)
Query: 145 FGFFTWAK-TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
F T+ K T+ G+ ++T++ L + +L +M N + T +T+
Sbjct: 130 FALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMCRPN-----VVTFTTL 184
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-- 261
M L R GR +AV M + G++ + ++D + K A + + ++
Sbjct: 185 MNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSH 244
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
I + I++ +I G K + DA EM ++G PD+ +Y C I+ +C + +
Sbjct: 245 IKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQ 304
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L+EM E+ P+V+TY+ +++A K ++ EA ++Y++M +P+T Y+S+I
Sbjct: 305 RLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGF 364
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K R+ A +F M +G P+V T+NT+I C ++ +LL +M E D
Sbjct: 365 CKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADT 424
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ C + L M + V D T +L+ GL ++GKL+ A F+
Sbjct: 425 TTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKA 484
Query: 502 M 502
M
Sbjct: 485 M 485
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 138/285 (48%), Gaps = 8/285 (2%)
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
+KG +E A +F + PL S I FN L+ + + D ++M ++ DV
Sbjct: 55 IKG--LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDV 112
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
S+ I+ +C T ++ + G +P V+T++ ++H L +++EAL ++ +
Sbjct: 113 YSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQ 172
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M C P+ +++L+ L + GRV +A + + M + G+ PN +TY T++ C +
Sbjct: 173 M----CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGD 228
Query: 422 EENALKLLQKMEE-DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+AL LL+KMEE KP+ Y+ ++ + R + L T M + + D TY
Sbjct: 229 TVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYN 288
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
++ G SG+ A +EM+ + I P TY L K+R
Sbjct: 289 CMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKER 333
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 133/287 (46%), Gaps = 36/287 (12%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS------LATMSTIMRR 206
T+TG + YNT++ FCL+ +L +D L+ +S + T +T++
Sbjct: 416 TETGLVADTTTYNTLI------HGFCLVGDLNAALD-LSQQMISSGVCPDIVTCNTLLDG 468
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS 266
L G+ DA+E F+ M+K ++ +D N VE
Sbjct: 469 LCDNGKLKDALEMFKAMQKSKMD---------LDASRPFNGVEP--------------DV 505
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
Q +NILI G K +A++ KEM +G P+ ++Y+ I C++ +
Sbjct: 506 QTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDS 565
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M K P V+T+ ++ KA ++++ L+++ +M + D Y +LI K G
Sbjct: 566 MGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGN 625
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+ A +IF++M GV P+ +T +M++ ++ E + A+ +L+ ++
Sbjct: 626 INGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 153/308 (49%), Gaps = 10/308 (3%)
Query: 212 RYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
R D AV F + + + V +D + L+D L K A + + +N
Sbjct: 144 RPDLAVRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYN 203
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
L GWC+ + A ++ M + G +P +Y ++ + R R D +M+++
Sbjct: 204 TLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKR 263
Query: 331 G-----CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
G CKP V++YT ++H LG A Q+ +A KV+++M + C P + Y++LI ++ K G
Sbjct: 264 GSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKG 323
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
V+DA +F+ M+ +G VPNV+TY +I C + + LKLL++M+ C+P +TY
Sbjct: 324 NVEDAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYN 383
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSM-DAGTYASLVRGLIESGKLE---LACSFFEE 501
L++ + M+ L M K + + + TY ++ + + E LA EE
Sbjct: 384 VLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVEE 443
Query: 502 MISKGIVP 509
M+ +G +P
Sbjct: 444 MVDRGYLP 451
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 139/288 (48%), Gaps = 15/288 (5%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP++ YNT+ D + K ++++ M E + + T + I++ R G+ A
Sbjct: 196 TPDVVTYNTLADGWCRVKDTSRALDVLRLMVE-SGIAPTKTTYNIILKGFFRAGQLRHAW 254
Query: 218 EAFRGMKKYG-----VEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFN 270
+ F MKK G + D + + ++ L +E A KVF E + C P S +N
Sbjct: 255 DFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAP-SVATYN 313
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI CK V+DA M +G+ P+VV+YT I C + L+ M+
Sbjct: 314 ALIQVICKKGNVEDAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNG 373
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKM-KSDDCLPDTSFYSSLIFILSKAGRVKD 389
GC+P V TY +++ L + ++ + L ++EKM K ++CLP+ Y+ +I + R +D
Sbjct: 374 GCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAED 433
Query: 390 ---ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
A + E+M +G +P +N +++ +E + KLL+ E+
Sbjct: 434 MVLAARMVEEMVDRGYLPRRFMFNRVLNGLMLTGNQELSRKLLRMQEK 481
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 102/223 (45%), Gaps = 6/223 (2%)
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D+ + ++ + + K ++ ++++ P V+TY + + K + AL V
Sbjct: 164 DLPLFNSLLDALSKSRHAGKAASLVRALEQR-FTPDVVTYNTLADGWCRVKDTSRALDVL 222
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG-----VVPNVLTYNTMIS 414
M P + Y+ ++ +AG+++ A + F MKK+G P+V++Y TM+
Sbjct: 223 RLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVH 282
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
+ E A K+ +M ++ C P TY L+++ C+K ++ + M
Sbjct: 283 GLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVP 342
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ TY L+RGL +GK++ E M + G P TY +L
Sbjct: 343 NVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVL 385
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 98/204 (48%), Gaps = 10/204 (4%)
Query: 338 TYTIVMHALGKA-KQINEALKVYEKM-KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
T+ I+ L + ++ + A++++ + +S D ++SL+ LSK+ A +
Sbjct: 130 TFPILFERLAVSQRRPDLAVRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVR 189
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
++ Q P+V+TYNT+ C + AL +L+ M E P TY +LK R
Sbjct: 190 ALE-QRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAG 248
Query: 456 RMK-VLNFLLTHMFKND----VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
+++ +F L + D +Y ++V GL +G+LE A F+EM +G P
Sbjct: 249 QLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPS 308
Query: 511 HSTYKMLEEKLEKKRLGNAKERIN 534
+TY L + + KK GN ++ +
Sbjct: 309 VATYNALIQVICKK--GNVEDAVT 330
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 141/255 (55%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N LI G C + D+A + +M ++G PDVV+YT +E C+ +++ L EM+
Sbjct: 155 YNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMR 214
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+KGC P ++TY +V++ + + ++++A++ + + S C P+T Y+ ++ L A R +
Sbjct: 215 DKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWE 274
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
DA ++ +M ++G PNV+T+N +IS C R E A+++L ++ + C P+ +Y P+L
Sbjct: 275 DAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPIL 334
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C++K+M + M + D +Y +L+ L G+++ A ++ KG
Sbjct: 335 HAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCT 394
Query: 509 PYHSTYKMLEEKLEK 523
P +Y + + L K
Sbjct: 395 PVLISYNTVIDGLTK 409
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 186/420 (44%), Gaps = 41/420 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN MV + + LV M + Y T +T++R L GR D+A+ M
Sbjct: 123 YNAMVAGYCVTGQLDNARRLVAAMPMEPDTY----TYNTLIRGLCGRGRTDNALAVLDDM 178
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIP------------------ 263
+ G D ++L++ K + + A K+ E +D C P
Sbjct: 179 LRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRV 238
Query: 264 ----------------LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
++ +NI++ G C + +DA+K M EM ++G P+VV++
Sbjct: 239 DDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNML 298
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I CR + L ++ + GC P+ ++Y ++HA K K+++ A+ E M S C
Sbjct: 299 ISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGC 358
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
PD Y++L+ L + G V A E+ +K +G P +++YNT+I + E AL+
Sbjct: 359 YPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALE 418
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
LL +M +PD TY+ + CR+ R++ + + + Y +++ GL
Sbjct: 419 LLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLC 478
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL-GNAKERINKLLAHAKEQKTF 546
+ A F M+S G +P STY +L E L + L A+E + +L + KT
Sbjct: 479 KRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCSRGVVSKTL 538
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/276 (21%), Positives = 123/276 (44%), Gaps = 8/276 (2%)
Query: 239 MDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
+ LV+ +E A ++ P ++ LI C + + +A++ +
Sbjct: 63 LRVLVRRGDLEEAIRLVESMAGLEPSAAGPCAALIKKLCASGRTAEARRVLAS-----CE 117
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PDV+SY + YC ++D+ + + +P TY ++ L + + AL V
Sbjct: 118 PDVMSYNAMVAGYCVTG---QLDNARRLVAAMPMEPDTYTYNTLIRGLCGRGRTDNALAV 174
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+ M C+PD Y+ L+ K K A ++ ++M+ +G P+++TYN +++ C
Sbjct: 175 LDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQ 234
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
++A++ L+ + C+P+ +Y +LK C +R + L+ M + + T
Sbjct: 235 EGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVT 294
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ L+ L G +E A +++ G P +Y
Sbjct: 295 FNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSY 330
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 96/221 (43%), Gaps = 6/221 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ K KK V+ M +++G Y + + +T++ L RGG D AVE
Sbjct: 330 YNPILHAFCKQKKMDRAMAFVELM--VSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 387
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
+K G + + ++D L K E A ++ E K P ++ + G C+
Sbjct: 388 LKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQP-DIITYSTISSGLCREG 446
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++++A KA ++ G P+ V Y + C+ + D M GC P+ TYT
Sbjct: 447 RIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYT 506
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
I++ L + EA ++ ++ S + T I +L
Sbjct: 507 ILIEGLAYEGLVKEAREMMAELCSRGVVSKTLVNKGAIRLL 547
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 102/357 (28%), Positives = 176/357 (49%), Gaps = 5/357 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N ++ L ++ + L++EM++ G + T +TIM+ + G D A+
Sbjct: 198 FNILIKALCRAHQIRPAILLMEEMEDF--GLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQ 255
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M + G ++VL++ K +E A + + ++ FN+L++G KT
Sbjct: 256 MVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTG 315
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V A + M M ++GF PD+ +Y I C+ + + L +M E+ C P+ +TY
Sbjct: 316 HVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYN 375
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L K Q+ EA K+ + LPD Y+SLI L + A E++++MK +
Sbjct: 376 TIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTK 435
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+ TYN +I S C R + + AL LL++ME C + TY L+ C+ KR+
Sbjct: 436 GCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEA 495
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ M VS ++ TY +L+ GL +S ++E A ++MI +G+ P TY L
Sbjct: 496 EEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSL 552
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/377 (27%), Positives = 185/377 (49%), Gaps = 6/377 (1%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMST 202
A F + G+ +N +V+ L K+ E++ M L G+ + T ++
Sbjct: 284 ALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMM--LREGFDPDIYTYNS 341
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KD 260
++ L + G D+AV+ M + +T + ++ TL K N VE A K+ L K
Sbjct: 342 LISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKG 401
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
+P +N LI G C +R A + KEM +G PD +Y I+ C ++
Sbjct: 402 ILP-DVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEA 460
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+ LKEM+ GC +VITY ++ K K+I EA +++++M+ ++ Y++LI
Sbjct: 461 LNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDG 520
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K+ RV++A+++ + M +G+ P+ TYN++++ C + + A ++Q M D C+PD
Sbjct: 521 LCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPD 580
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ C+ R++ LL + +++ Y +++ L + + A F
Sbjct: 581 IVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFR 640
Query: 501 EMISKGIVPYHSTYKML 517
EMI K P TYK++
Sbjct: 641 EMIEKAEAPDAVTYKIV 657
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 113/410 (27%), Positives = 203/410 (49%), Gaps = 11/410 (2%)
Query: 132 QTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN 191
+LRR D + F WA Q + + ++ ++ LGK+ +F M +++KEM +++
Sbjct: 61 HSLRR-EEDSSAVIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEM-KIS 118
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK-KYGVEKDTRALSVLMDTLVKGNS--- 247
+ ++ + G Y++ ++ M+ ++GV +T + L++ LV GN
Sbjct: 119 LSVIDNDSLLVFIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKL 178
Query: 248 VEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
VE A+ + I FNILI C+ ++ A M+EM G PD ++T
Sbjct: 179 VEIAHSNMV--SRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTI 236
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK-SDD 366
++ + E + ++M E GC + +T ++++ K +I EAL+ E+M +
Sbjct: 237 MQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREG 296
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
PD ++ L+ LSK G VK A E+ + M ++G P++ TYN++IS C E + A+
Sbjct: 297 FFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAV 356
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
K+L +M E C P+ TY ++ C++ +++ L + + D TY SL++GL
Sbjct: 357 KVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGL 416
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
S +A ++EM +KG P TY ML + L + G +E +N L
Sbjct: 417 CLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR--GKLQEALNLL 464
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/330 (28%), Positives = 164/330 (49%), Gaps = 4/330 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++ L + G A+E M + G + D + L+ L K V+ A KV +
Sbjct: 303 TFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQM 362
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+DC P ++ +N +I CK +V++A K + +G PDV +Y I+ C ++
Sbjct: 363 IERDCSP-NTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRN 421
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ KEM+ KGC P TY +++ +L ++ EAL + ++M+ C + Y++
Sbjct: 422 HTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNT 481
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI K R+ +A EIF+ M+ QGV N +TYNT+I C E A +L+ +M +
Sbjct: 482 LIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEG 541
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+PD TY LL C+ +K ++ M + D TY +L+ GL ++G++E A
Sbjct: 542 LRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAAT 601
Query: 497 SFFEEMISKGI-VPYHSTYKMLEEKLEKKR 525
+ KGI + H+ +++ +KR
Sbjct: 602 KLLRTIQMKGINLTPHAYNPVIQALFRRKR 631
>gi|296090648|emb|CBI41047.3| unnamed protein product [Vitis vinifera]
Length = 514
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 154/285 (54%), Gaps = 2/285 (0%)
Query: 235 LSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQ 294
L+D L K SV+ A +F + + + + F L++GWC+ K+ +A+ + ++ +
Sbjct: 88 FGCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIRE 147
Query: 295 QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
GF PD+V Y + Y D LKEM+ K C+P+V+++T ++ AL K++ E
Sbjct: 148 AGFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEE 207
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A++V+ +M+S C D Y++LI K G++ E+ ++M +QG +PN +TY +++
Sbjct: 208 AMRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQGHIPNPMTYLHIMA 267
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
+ + E E ++L+++M + C PD Y ++++ C+ +K + M +S
Sbjct: 268 AHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSP 327
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIV--PYHSTYKML 517
T+ ++ G + L AC FF+EM+ +G++ P + T K L
Sbjct: 328 GLDTFVIMIHGFLSQRCLVEACEFFKEMVGRGLLSAPQYGTLKEL 372
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/391 (19%), Positives = 153/391 (39%), Gaps = 75/391 (19%)
Query: 95 TDVDKISKILSKQYQSPDKVVEALKGCGVS----------VSNSLVEQTLRRFSN---DL 141
DV+K+ +IL K + K+ AL+ GV+ N V++ F +
Sbjct: 56 ADVEKVYRILRKFHSRVPKLELALQESGVAHVFGCLLDALCKNGSVKEAASLFEDMRIRF 115
Query: 142 TPAFGFFT-----WAK--------------TQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
TP FT W + + G+ +YN ++ + K ++
Sbjct: 116 TPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMVDAYD 175
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
L+KEM ++ + +T+++ L + ++A+ F M+ G D + L+
Sbjct: 176 LLKEMRR-KECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLISGF 234
Query: 243 VKGNSVEHAYKVF-------------------------LEFKDCIPLSSQ---------- 267
K + Y++ E ++CI L +
Sbjct: 235 CKWGKISKGYELLDNMIQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDL 294
Query: 268 -IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
I+NI+I CK ++ + + EM G SP + ++ I + ++ + + KE
Sbjct: 295 NIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKE 354
Query: 327 MQEKG--CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI--LS 382
M +G P T ++++L +A+++ + V+ + + C D + Y+ I+I L
Sbjct: 355 MVGRGLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGC--DLNVYAWTIWIHALF 412
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
G VK+A DM GV+P T+ ++
Sbjct: 413 SNGHVKEACSYCLDMMDAGVMPQPDTFAKLM 443
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 75/346 (21%), Positives = 139/346 (40%), Gaps = 22/346 (6%)
Query: 69 LAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL--------KG 120
L GW +L E + ++ E D+ + +L+ Y + K+V+A K
Sbjct: 126 LYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTG-YAAAGKMVDAYDLLKEMRRKE 184
Query: 121 CGVSVSN--SLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFC 178
C +V + +L++ + + A F + G Y T++ K K
Sbjct: 185 CEPNVMSFTTLIQALCAK--KKMEEAMRVF-FEMQSCGCPADAVTYTTLISGFCKWGKIS 241
Query: 179 LMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
+EL+ M + G++ + T IM + ++ +E M+K G D ++
Sbjct: 242 KGYELLDNM--IQQGHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIGCTPDLNIYNI 299
Query: 238 LMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQ 295
++ K ++ +V+ E + LS + F I+IHG+ R + +A + KEM +
Sbjct: 300 VIRLACKLGEIKEGVRVWNEM-EATGLSPGLDTFVIMIHGFLSQRCLVEACEFFKEMVGR 358
Query: 296 GF--SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
G +P + + R + D + KGC +V +TI +HAL +
Sbjct: 359 GLLSAPQYGTLKELLNSLLRAEKLEMSKDVWSCIMTKGCDLNVYAWTIWIHALFSNGHVK 418
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
EA M +P ++ L+ L K + A EI E ++K
Sbjct: 419 EACSYCLDMMDAGVMPQPDTFAKLMRGLRKLYNRQIAAEITEKVRK 464
>gi|147801213|emb|CAN73209.1| hypothetical protein VITISV_002838 [Vitis vinifera]
Length = 1024
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 200/431 (46%), Gaps = 36/431 (8%)
Query: 124 SVSNSLVEQTLRRFSNDLTPA--FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
S+S + V QTL+ TPA FF W + + G+ H + Y M+++LG+S+
Sbjct: 185 SLSKTTVLQTLQLIR---TPAKALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAAR 240
Query: 182 ELVKEMDELNNGY---------------VSLATMSTIMRRLVRGGRYDDAVEAFRGM-KK 225
V +++ + G S+ T ++++ +++ GR A + F M
Sbjct: 241 NFVFSIEKKSGGAESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDT 300
Query: 226 YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRKVD 283
YGV DT ++L+ + V+ + F E C P +N L+ G C+ KV
Sbjct: 301 YGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDP-DVVTYNTLVDGLCRAGKVK 359
Query: 284 DAQKAMKEMFQQ--GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
A +K M ++ SP+VV+YT I YC ++D + L EM +G KP+ ITY
Sbjct: 360 IAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNT 419
Query: 342 VMHALGKAKQINEALKVYEKMKSDDC-LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L +A+++++ ++ E M D +PDT ++LI G++++A +FE M +
Sbjct: 420 LIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSEL 479
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEE------DL-CKPDCETYAPLLKMCCR 453
V P+ TY+ ++ S C R + A + ++ E D+ CKP Y P+ + C
Sbjct: 480 RVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCS 539
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+ K + + K + D +Y +L+ G G E M+ + VP T
Sbjct: 540 NGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAET 598
Query: 514 YKMLEEKLEKK 524
Y ++ + L KK
Sbjct: 599 YGLMIDGLLKK 609
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 165/383 (43%), Gaps = 41/383 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++ L +++K + E+++ M + G++ T++T+++ G+ ++A F
Sbjct: 417 YNTLIQGLCEAQKLDKIKEILEGMVG-DGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEK 475
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---------CIPLSSQIFNILI 273
M + V+ D+ SVL+ +L + A + F E + C PL + +N +
Sbjct: 476 MSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAA-YNPMF 534
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
C K A++ +++ ++G + D SY I +CRE D L M +
Sbjct: 535 EYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFV 593
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS-FYSSLIFILSKAGRVKD--- 389
P TY +++ L K A K EKM LP T+ F+S L ++ K R++
Sbjct: 594 PDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKERRIRQNID 653
Query: 390 -ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+ + K G+ ++ EN L KMEE L+
Sbjct: 654 LSTHTVRLLYKSGLQDKAFMTIGLLY--------ENGY--LVKMEE------------LV 691
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+ +++ +L + S+D ++++ GL ++ K+ A + + E++ KG+
Sbjct: 692 SFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQ 751
Query: 509 PYHSTYKMLEEKLEKK-RLGNAK 530
+ + L LE + RL AK
Sbjct: 752 HRLTCQEDLRISLEAEGRLNEAK 774
>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
Length = 703
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/327 (28%), Positives = 163/327 (49%), Gaps = 3/327 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++++ R + D A + F M G +D + + L++ + ++ A ++F E
Sbjct: 48 TFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEM 107
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
P ++ L+ G CK + ++ ++ M + G+ P +Y ++ C E+ +
Sbjct: 108 DQ--P-DMHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAK 164
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ ++ L+EM EKG P V+T T V++A K ++++AL+V E MK C P+ Y++L+
Sbjct: 165 EAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALV 224
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
G+V A + M+ GV P+ +TYN +I C E+A +LL+ ME D
Sbjct: 225 QGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLI 284
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
D TY L+ C+ R L + + +A T+ SL+ GL +SGK+++A F
Sbjct: 285 ADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKF 344
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKR 525
E+M+S G P TY E L K +
Sbjct: 345 LEKMVSAGCTPDTYTYSSFIEHLCKMK 371
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/378 (28%), Positives = 177/378 (46%), Gaps = 31/378 (8%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRL-VRG----GRYDDAVE 218
YN +V + FC ++ K M LN V + L +RG G + A
Sbjct: 220 YNALV------QGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFR 273
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGW 276
R M+ G+ D + L++ L K + A +F LE + P ++ FN LI+G
Sbjct: 274 LLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKP-NAVTFNSLINGL 332
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK+ KVD A K +++M G +PD +Y+ FIEH C+ K ++ + EM +K KPS
Sbjct: 333 CKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 392
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+ YTIV+H L K + + + +M S C PD Y++ + GR+ +A + +
Sbjct: 393 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLME 452
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M K GV + + YNT++ + + ++A+ +L++M P+ TY LL+ R +
Sbjct: 453 MSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRL 512
Query: 457 MK-VLNFL---------LTHMF-------KNDVSMDAGTYASLVRGLIESGKLELACSFF 499
++ VL LT +F KN+ ++GTY+S++ G E G+ E A S
Sbjct: 513 VEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLV 572
Query: 500 EEMISKGIVPYHSTYKML 517
M I Y L
Sbjct: 573 SLMKEDSISLNEDIYTAL 590
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 157/334 (47%), Gaps = 6/334 (1%)
Query: 182 ELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
EL EMD+ + + + +++ L + GR ++ + R MK+ G TRA + ++D
Sbjct: 102 ELFGEMDQPD-----MHMYAALVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDF 156
Query: 242 LVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
+ A ++ E F+ + +I+ +CK ++ DA + ++ M +G P+
Sbjct: 157 RCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPN 216
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
V +Y ++ +C E K L +M+ G P +TY +++ I A ++
Sbjct: 217 VWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLR 276
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
M+ D + D Y++LI L K GR A +F+ ++ +G+ PN +T+N++I+ C
Sbjct: 277 LMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSG 336
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+ + A K L+KM C PD TY+ ++ C+ K + + M + DV Y
Sbjct: 337 KVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYT 396
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ L++ L + EM+S G P TY
Sbjct: 397 IVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTY 430
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 94/400 (23%), Positives = 181/400 (45%), Gaps = 9/400 (2%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
N+++ RR DL A + + ++G+ +N+++ ++ + + +L +
Sbjct: 15 NAVIRSLCRR--ADLASALRYLS-LMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDK 71
Query: 187 MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
M L + + + ++ GR D+AVE F M + D + L+ L K
Sbjct: 72 M-PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAG 126
Query: 247 SVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
E + K+ S++ + ++ C RK +A++ ++EMF++G +P VV+ T
Sbjct: 127 RGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCT 186
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I YC+E L+ M+ +GCKP+V TY ++ ++++A+ + KM+
Sbjct: 187 AVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVC 246
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
PD Y+ LI G ++ A + M+ G++ + TYN +I++ C + A
Sbjct: 247 GVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQA 306
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L +E KP+ T+ L+ C+ ++ + L M + D TY+S +
Sbjct: 307 CSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEH 366
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
L + + SF EM+ K + P Y ++ KL K+R
Sbjct: 367 LCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKER 406
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 163/375 (43%), Gaps = 4/375 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGR 212
+ G+ + Y +VD +K E+++EM E G + T + ++ + GR
Sbjct: 140 ELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFE--KGLAPCVVTCTAVINAYCKEGR 197
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNI 271
DA+ MK G + + + L+ V A + + + C + + +N+
Sbjct: 198 MSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNL 257
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G C ++ A + ++ M G D +Y I C++ + ++ +G
Sbjct: 258 LIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRG 317
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
KP+ +T+ +++ L K+ +++ A K EKM S C PDT YSS I L K ++
Sbjct: 318 IKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGL 377
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+M ++ V P+ + Y +I + +M C PD TY ++
Sbjct: 378 SFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAY 437
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C + R+ +L M KN V++D Y +L+ G G+ + A S ++M S VP
Sbjct: 438 CIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQ 497
Query: 512 STYKMLEEKLEKKRL 526
TY +L L + RL
Sbjct: 498 FTYFILLRHLVRMRL 512
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 126/290 (43%), Gaps = 39/290 (13%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N +I C+ + A + + M + G+ PD ++ I YCR D +M
Sbjct: 14 YNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMP 73
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR-- 386
+G V++Y ++ + +I+EA++++ +M PD Y++L+ L KAGR
Sbjct: 74 LRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGE 129
Query: 387 ---------------------------------VKDANEIFEDMKKQGVVPNVLTYNTMI 413
K+A E+ ++M ++G+ P V+T +I
Sbjct: 130 EGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVI 189
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
++ C +AL++L+ M+ CKP+ TY L++ C + ++ LL M V+
Sbjct: 190 NAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVN 249
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
DA TY L+RG G +E A M G++ TY L L K
Sbjct: 250 PDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCK 299
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/418 (23%), Positives = 167/418 (39%), Gaps = 62/418 (14%)
Query: 164 YNTMVDVL---GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
YN +++ L G++ + C +++ ++ N T ++++ L + G+ D A +
Sbjct: 290 YNALINALCKDGRTDQACSLFDSLETRGIKPNA----VTFNSLINGLCKSGKVDIAWKFL 345
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCK 278
M G DT S ++ L K + E KD P S+ + I+IH K
Sbjct: 346 EKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKP-STVNYTIVIHKLLK 404
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R + EM G +PDVV+YT + YC E + ++ L EM + G +
Sbjct: 405 ERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMA 464
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL------------IFILSKAG- 385
Y +M Q + A+ + ++M S +P+ Y L + L+ AG
Sbjct: 465 YNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGV 524
Query: 386 ----RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+ D +F+ MKK +PN TY++++ E A L+ M+ED +
Sbjct: 525 WKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNE 584
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF-- 499
+ Y L+ C+ KR L+ M ++ +Y L+ GLI G+ + A F
Sbjct: 585 DIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMN 644
Query: 500 --------EEMISKGIV-------------------------PYHSTYKMLEEKLEKK 524
+E++ K I+ P H TY ML E+L +
Sbjct: 645 SRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPDR 702
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 103/235 (43%), Gaps = 5/235 (2%)
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+Y I CR D L M G +P T+ ++ + Q++ A +++KM
Sbjct: 13 TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
D Y++LI + GR+ +A E+F +M + P++ Y ++ C
Sbjct: 73 PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRG 128
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
E L +L++M+E +P YA ++ C +++ K +L MF+ ++ T ++
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
+ + G++ A E M +G P TY L + + ++ A +NK+
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKM 243
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 183/375 (48%), Gaps = 2/375 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N+++ L K +K L+KEM E+N T S + L+R + A+E +
Sbjct: 284 FNSLLSGLCKMRKMKEARSLLKEM-EVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQA 342
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ-IFNILIHGWCKTRKV 282
+ G+ + S+L++ L K VE A ++ +F + ++ + I+N ++G+C+ +
Sbjct: 343 TEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDM 402
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ A ++ M G P+ +++ I+ +C K+ K ++ +K+M EKG PSV TY +
Sbjct: 403 NKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTL 462
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ GK + ++ E+M+ P+ Y SLI L K G++ +A + DM +GV
Sbjct: 463 IDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGV 522
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+PN YN +I +C + ++AL+ +M P TY L+ C+K ++
Sbjct: 523 LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAED 582
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
LT + + S D TY SL+ G +G + +E M + GI P TY L
Sbjct: 583 FLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCS 642
Query: 523 KKRLGNAKERINKLL 537
K+ + ++ N++L
Sbjct: 643 KEGIELVEKLYNEML 657
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 94/364 (25%), Positives = 170/364 (46%), Gaps = 5/364 (1%)
Query: 150 WAK--TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRL 207
W K + G + E YNT++D GK F ++++++M+E+ ++ + +++ L
Sbjct: 443 WVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVK-PNVVSYGSLINCL 501
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSS 266
+ G+ +A R M GV + + ++L+D V+ A + F E + I +
Sbjct: 502 CKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTL 561
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+N+LI G CK K+ +A+ + ++ G SPDV++Y I Y + K +
Sbjct: 562 VTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYET 621
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M+ G KP+V TY ++ K + I K+Y +M + LPD Y+++I ++ G
Sbjct: 622 MKNLGIKPTVRTYHPLISGCSK-EGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGN 680
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ A + + M QG+ P+ +TYN++I + N L+ M+ P +TY
Sbjct: 681 TQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDI 740
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+K C K M +N+ +A L GL + G+L+ EM KG
Sbjct: 741 LVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKG 800
Query: 507 IVPY 510
I+ +
Sbjct: 801 IINH 804
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 174/370 (47%), Gaps = 19/370 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWEL------VKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
+N+++D KFC M E+ VK+M E G S+ T +T++ + +D
Sbjct: 424 FNSLID------KFCDMKEMDKAEEWVKKMAE--KGVTPSVETYNTLIDGYGKLCTFDRC 475
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIH 274
+ M++ GV+ + + L++ L K + A V + + +P ++Q++N+LI
Sbjct: 476 FQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLP-NAQVYNMLID 534
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G C KV DA + EM + SP +V+Y I+ C++ + +D L ++ G P
Sbjct: 535 GSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSP 594
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
VITY ++ A +++ L +YE MK+ P Y LI SK G ++ +++
Sbjct: 595 DVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLY 653
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+M + ++P+ + YN MI + A L Q M + PD TY L+ R+
Sbjct: 654 NEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFRE 713
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ + L+ +M +++ A TY LV+G + A ++ EM+ +P S
Sbjct: 714 GKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASIC 773
Query: 515 KMLEEKLEKK 524
L LE++
Sbjct: 774 NELTAGLEQE 783
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 121/250 (48%)
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
I+N+LI G C+ +++ DA+K EM +V+Y I+ YC+ + + M
Sbjct: 213 IYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERM 272
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+EK P++IT+ ++ L K +++ EA + ++M+ + +PD YS L L +
Sbjct: 273 KEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG 332
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A E++E ++G+ N T + +++ C + + E A ++L+K E+ D Y
Sbjct: 333 NGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTF 392
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ CR M + M + ++ T+ SL+ + +++ A + ++M KG+
Sbjct: 393 VNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGV 452
Query: 508 VPYHSTYKML 517
P TY L
Sbjct: 453 TPSVETYNTL 462
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 130/272 (47%), Gaps = 1/272 (0%)
Query: 254 VFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+F F C IPL + ++L+ CK++ + +A + + M + G P +VS +
Sbjct: 93 LFSCFSACSIPLRITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLV 152
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
EK F KV D E++ G + Y + A K + + ++ + M+ P+
Sbjct: 153 NEKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVF 212
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+ LI L + R++DA ++F++M +V +++TYNT+I C E + A K+ ++M
Sbjct: 213 IYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERM 272
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+E P+ T+ LL C+ ++MK LL M N D TY+ L GL+
Sbjct: 273 KEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG 332
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
A +E+ KGI + T +L L K+
Sbjct: 333 NGAMELYEQATEKGIRINNYTGSILLNGLCKQ 364
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/265 (23%), Positives = 121/265 (45%), Gaps = 1/265 (0%)
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I K + + + + M ++G P+V Y I CREK R + EM
Sbjct: 183 IQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINL 242
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
S++TY ++ K +++ A K+ E+MK P+ ++SL+ L K ++K+A
Sbjct: 243 VGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARS 302
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ ++M+ G +P+ TY+ + + A++L ++ E + + T + LL C
Sbjct: 303 LLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLC 362
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
++ +++ +L +N + D Y + V G G + A E M S G+ P
Sbjct: 363 KQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSI 422
Query: 513 TYKMLEEKL-EKKRLGNAKERINKL 536
T+ L +K + K + A+E + K+
Sbjct: 423 TFNSLIDKFCDMKEMDKAEEWVKKM 447
>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 894
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 118/404 (29%), Positives = 197/404 (48%), Gaps = 32/404 (7%)
Query: 137 FSN-DLTP--AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE------- 186
F+N +L P A FF W Q G++HT Y ++ +L ++ F E V+
Sbjct: 76 FNNPNLHPLTALNFFKWIHYQHGFIHTVHSYQPLLFILVRNG-FLRAAENVRNSMIKSCV 134
Query: 187 --------MDELNNGYVSLATMS--TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALS 236
++ L + SL+ S + L R G D+ F+ M GVE + + +
Sbjct: 135 SSHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFN 194
Query: 237 VLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
+++ K +V A F ++F C S + LI G+CK ++ DA K + M
Sbjct: 195 TMVNAHCKIGNVVVAKAYFCGLMKFGFCC--DSFTYTSLILGYCKIHELGDAYKVFEIMP 252
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKPSVITYTIVMHALGKAK 350
Q+G + VSYT I +C + K+D+ L+ +M+E GC P V TYT+++ A +
Sbjct: 253 QEGCLRNEVSYTNLIHGFC---EVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVG 309
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
+ EALK +E+M + P+ Y+ LI K G++ + E+ M ++G+V +V+ +N
Sbjct: 310 KETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFN 369
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I C R E+A+ +L M+ + P+ TY L+ CRKK M LL M++N
Sbjct: 370 ALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYEN 429
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+S + TY +L+ GL ++ ++ A MI G VP T+
Sbjct: 430 KLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTF 473
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 173/382 (45%), Gaps = 5/382 (1%)
Query: 142 TPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATM 200
T A FF + G Y ++D K K E++ M L G VS +
Sbjct: 312 TEALKFFE-EMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTM--LEKGLVSSVVPF 368
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FK 259
+ ++ + G +DA+ MK V ++R + L+ + S++ A + + ++
Sbjct: 369 NALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYE 428
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ + + +N LIHG CK R VD A + M + GF PD ++ FI+ C+ +
Sbjct: 429 NKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQ 488
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ ++EK + + YT ++ KA++ ++A ++++M + C P++ ++ L+
Sbjct: 489 AHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLD 548
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L K G+V+DA + + M K P V TY +I S+ + A L +M C+P
Sbjct: 549 GLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQP 608
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
+ TY +K CR+ R+ ++ + + + +D+ Y LV G+L+ A
Sbjct: 609 NVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVL 668
Query: 500 EEMISKGIVPYHSTYKMLEEKL 521
M G P TY +L + L
Sbjct: 669 IRMFDTGCEPSRQTYSILLKHL 690
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/425 (26%), Positives = 174/425 (40%), Gaps = 67/425 (15%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++ L K++ W L M + +G+V T + L + G+ + A + F
Sbjct: 438 YNTLIHGLCKARVVDSAWRLHHLM--IKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFES 495
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
+K+ E + + L+D K A+ +F + F+ C P +S FN+L+ G K
Sbjct: 496 LKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFP-NSITFNVLLDGLRKEG 554
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
KV+DA + M + P V +YT IE RE DF + + L +M GC+P+V+TYT
Sbjct: 555 KVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYT 614
Query: 341 -----------------------------------IVMHALGKAKQINEALKVYEKMKSD 365
++++A G Q++ A V +M
Sbjct: 615 AFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDT 674
Query: 366 DCLPDTSFYSSLI--FILSKAGR-------------VKDAN-----------EIFEDMKK 399
C P YS L+ I K + V +AN +FE M +
Sbjct: 675 GCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVE 734
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
QG VPNV TY+ +I C A +L M+E P + LL CC+ +
Sbjct: 735 QGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEE 794
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
LL M + + +Y LV GL E G E A F ++S G +K+L +
Sbjct: 795 ALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLD 854
Query: 520 KLEKK 524
L +K
Sbjct: 855 GLVRK 859
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/312 (23%), Positives = 148/312 (47%), Gaps = 3/312 (0%)
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNIL 272
DA + F M + G ++ + + L+ + ++ A ++F + K+ C P + +L
Sbjct: 243 DAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFP-DVPTYTVL 301
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+ +C+ K +A K +EM + G P+V +YT I+++C+ + + L M EKG
Sbjct: 302 VAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGL 361
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
SV+ + ++ K + +A+ V + MK + P++ Y+ LI + + A
Sbjct: 362 VSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMA 421
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ M + + PN++TYNT+I C ++A +L M +D PD T+ + C
Sbjct: 422 LLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLC 481
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ +++ + + + + + Y +L+ G ++ K A F+ M+ +G P
Sbjct: 482 KMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSI 541
Query: 513 TYKMLEEKLEKK 524
T+ +L + L K+
Sbjct: 542 TFNVLLDGLRKE 553
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 35/234 (14%)
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+A+ + + FS V SY R +++ K+M G +P++I++ ++
Sbjct: 138 EARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMV 197
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+A K + A + + D+ Y+SLI K + DA ++FE M ++G +
Sbjct: 198 NAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCL 257
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
N ++Y +I C + + AL+L +M+ED C PD
Sbjct: 258 RNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPD----------------------- 294
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
TY LV E GK A FFEEM+ GI P TY +L
Sbjct: 295 ------------VPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVL 336
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 112/280 (40%), Gaps = 29/280 (10%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + ++ R GR +A E +K+ G+ D+ VL++ ++ A+ V
Sbjct: 609 NVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVL 668
Query: 256 LEFKD--CIPLSSQIFNILIHGWCKTR---------------KVDDAQ-----------K 287
+ D C P S Q ++IL+ + VD+A
Sbjct: 669 IRMFDTGCEP-SRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEIITM 727
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
++M +QG P+V +Y+ I+ C+ + M+E G PS + ++ +
Sbjct: 728 LFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCC 787
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
K EAL++ + M + L Y L+ L + G + A EIF + G + +
Sbjct: 788 KLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEV 847
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+ ++ + + +L ME+ C+ +T+ L
Sbjct: 848 VWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 169/343 (49%), Gaps = 5/343 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
++++R R G+ A +++ G D +VL+ K +++A +V L+ +
Sbjct: 96 TSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV-LDRMN 154
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P +N ++ C + K+ A + + Q+ PDV++YT IE C+E +
Sbjct: 155 VAP-DVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQA 213
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
L EM+ KG KP V+TY ++++ + K +++EA+K M S C P+ ++ ++
Sbjct: 214 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 273
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ GR DA ++ DM ++G P+V+T+N +I+ C + A+ +L+KM C P+
Sbjct: 274 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 333
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
+Y PLL C++K+M L M D TY +L+ L + GK+++A
Sbjct: 334 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 393
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
++ SKG P TY + + L K ER KLL + +
Sbjct: 394 QLSSKGCSPVLITYNTVIDGLSKV---GKTERAIKLLDEMRRK 433
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 182/375 (48%), Gaps = 6/375 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ L S K E++ + Y + T + ++ + A++ M
Sbjct: 162 YNTILRTLCDSGKLKQAMEVLDRQLQ-KECYPDVITYTILIEATCKESGVGQAMKLLDEM 220
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ G + D +VL++ + K ++ A K + C P + NI++ C T +
Sbjct: 221 RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQP-NVITHNIILRSMCSTGR 279
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
DA+K + +M ++G SP VV++ I CR+ + D L++M GC P+ ++Y
Sbjct: 280 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 339
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H K K+++ A++ + M S C PD Y++L+ L K G+V A EI + +G
Sbjct: 340 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 399
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P ++TYNT+I + E A+KLL +M KPD TY+ L+ R+ ++
Sbjct: 400 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 459
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ + +A TY S++ GL +S + + A F MISK P +TY +L E +
Sbjct: 460 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 519
Query: 522 EKKRLGNAKERINKL 536
+ G AKE ++ L
Sbjct: 520 AYE--GLAKEALDLL 532
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 181/381 (47%), Gaps = 8/381 (2%)
Query: 149 TWAKT---QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMR 205
TW Q+G + YN ++ KS + +++ M N + T +TI+R
Sbjct: 112 TWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILR 167
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS 265
L G+ A+E + D ++L++ K + V A K+ E ++
Sbjct: 168 TLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKP 227
Query: 266 SQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ +N+LI+G CK ++D+A K + M G P+V+++ + C + + L
Sbjct: 228 DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 287
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+M KGC PSV+T+ I+++ L + + A+ + EKM C P++ Y+ L+ K
Sbjct: 288 SDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKE 347
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
++ A E + M +G P+++TYNT++++ C + + A+++L ++ C P TY
Sbjct: 348 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 407
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
++ + + + LL M + + D TY+SLV GL GK++ A FF ++
Sbjct: 408 NTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 467
Query: 505 KGIVPYHSTYKMLEEKLEKKR 525
GI P TY + L K R
Sbjct: 468 LGIRPNAITYNSIMLGLCKSR 488
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 166/366 (45%), Gaps = 14/366 (3%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
+GK+KK W V E+ E + + T + ++ + G D+A++ M V
Sbjct: 105 IGKTKKA--TW--VMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAP 157
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
D + ++ TL ++ A +V L+ K+C P + ILI CK V A K
Sbjct: 158 DVVTYNTILRTLCDSGKLKQAMEVLDRQLQ-KECYP-DVITYTILIEATCKESGVGQAMK 215
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+ EM +G PDVV+Y I C+E + L M GC+P+VIT+ I++ ++
Sbjct: 216 LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 275
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
+ +A K+ M C P ++ LI L + G + A +I E M G PN L
Sbjct: 276 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 335
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
+YN ++ C + + A++ L M C PD TY LL C+ ++ V +L +
Sbjct: 336 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 395
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLG 527
S TY +++ GL + GK E A +EM KG+ P TY L L ++ G
Sbjct: 396 SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE--G 453
Query: 528 NAKERI 533
E I
Sbjct: 454 KVDEAI 459
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 173/334 (51%), Gaps = 7/334 (2%)
Query: 180 MWELVKEMDELNN--GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
+ + +K +DE+ N + T + ++ + + GR D+A++ M YG + + ++
Sbjct: 210 VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 269
Query: 238 LMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
++ ++ A K+ + K C P S FNILI+ C+ + A +++M
Sbjct: 270 ILRSMCSTGRWMDAEKLLSDMLRKGCSP-SVVTFNILINFLCRQGLLGRAIDILEKMPMH 328
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G +P+ +SY + +C+EK + + L M +GC P ++TY ++ AL K +++ A
Sbjct: 329 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 388
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+++ ++ S C P Y+++I LSK G+ + A ++ ++M+++G+ P+++TY++++S
Sbjct: 389 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 448
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETY-APLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
+ + A+K +E +P+ TY + +L +C ++ + ++F L +M
Sbjct: 449 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF-LAYMISKRCKP 507
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
TY L+ G+ G + A E+ S+G+V
Sbjct: 508 TEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 541
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L + G ++D + E M +G +P+++ ++I C + + A +++ +E+ PD
Sbjct: 67 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 126
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ C+ + +L M +V+ D TY +++R L +SGKL+ A +
Sbjct: 127 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 183
Query: 501 EMISKGIVPYHSTYKMLEE 519
+ K P TY +L E
Sbjct: 184 RQLQKECYPDVITYTILIE 202
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 121/481 (25%), Positives = 202/481 (41%), Gaps = 84/481 (17%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT--MS 201
A FF WA + G+ H + Y M+++LG+++ + + + +NG V L +
Sbjct: 102 ALQFFNWAP-ELGFTHNDQSYFLMLEILGRARNLNVARNFLFSIKRRSNGTVKLEDRFFN 160
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
+++R + G + ++V+ F MK GV + L+ L+K A VF E
Sbjct: 161 SLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDEMLST 220
Query: 262 IPLS--SQIFNILIHGWCKTRKVDDAQKAMKEMFQ------------------------- 294
++ + FNILI G+CK VD+ + KEM +
Sbjct: 221 YGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAGKVNI 280
Query: 295 ------------QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+PDVV+YT + YC + + + +EM KG KP+ ITY +
Sbjct: 281 AHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTL 340
Query: 343 MHALGKAKQINEALKVYE-KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+ L + ++I++ +++E + +PDT ++L+ AG + DA E+FE M
Sbjct: 341 IKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLN 400
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEE-------DLCKPDCETYAPLLKMCCR- 453
V P+ TY+ +I + C R E A +L ++ E D C P Y + + CR
Sbjct: 401 VRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRN 460
Query: 454 ----------KKRMK-----VLNF------------------LLTHMFKNDVSMDAGTYA 480
++ MK L+F LL M + D D TY
Sbjct: 461 GKTAKAERVFRQLMKRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQ 520
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHA 540
SL+ GL++ G+ +A E+MI VP ST+ + +L K + R L+
Sbjct: 521 SLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEG 580
Query: 541 K 541
K
Sbjct: 581 K 581
>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 201/413 (48%), Gaps = 16/413 (3%)
Query: 98 DKISKILSKQYQSPD--KVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
++ +IL PD K +E LK + V + LV + L+ ++ FF WA +
Sbjct: 63 ERFIRILKIFKWGPDAEKALEVLK---LKVDHRLVREVLK-IDVEIHVKIQFFKWAGKRR 118
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
+ H Y ++ L ++ MW+ ++EM + + A +S I++ L + +
Sbjct: 119 NFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVR-STCVIGPADLSEIVKVLGKAKMVNK 177
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQIFNIL 272
A+ F +K + + + ++ L++ E ++++ E DC+P + ++ L
Sbjct: 178 ALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLP-DTVTYSAL 236
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I + K + D A EM + G P YT + Y + K ++EM+EKGC
Sbjct: 237 IAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGC 296
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+V TYT ++ +GKA ++ EA ++ M + C PD ++LI +L KAGR+ DA +
Sbjct: 297 ALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIK 356
Query: 393 IFEDMKKQGVVPNVLTYNTMISS---ACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
+FE+M+ PNV+TYNT+I + + AR+ E A +KM+E+ P TY+ L+
Sbjct: 357 LFEEMESLQCTPNVVTYNTVIKALFESKARASE--AFLWYEKMKENGVVPSSFTYSILID 414
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
C+ R++ LL M + + Y SL+ L ++ + E A F+E+
Sbjct: 415 GFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQEL 467
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 182/373 (48%), Gaps = 5/373 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G T ++Y T++ + K + LV+EM E +++ T + +++ + + G+
Sbjct: 258 ENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKE-KGCALTVYTYTELIKGVGKAGKV 316
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNI 271
++A F M K G + D ++ L++ L K + A K+F E + C P + +N
Sbjct: 317 EEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTP-NVVTYNT 375
Query: 272 LIHGWCKTR-KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+I +++ + +A ++M + G P +Y+ I+ +C+ K L+EM EK
Sbjct: 376 VIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEK 435
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P Y +++ALGKAK+ A +++++++ + Y+ +I L K GR+ +A
Sbjct: 436 GFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEA 495
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
++F +MKK G P+V YN ++S + A LL+ MEE+ C PD ++ +L
Sbjct: 496 VDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNG 555
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
R K + T M + + D +Y +++ L +G E A +EM SKG
Sbjct: 556 FARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYD 615
Query: 511 HSTYKMLEEKLEK 523
TY + E + K
Sbjct: 616 LITYSSILEAVGK 628
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 156/314 (49%), Gaps = 8/314 (2%)
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG----NSVEHAYKVF 255
M I R R G Y +++ M + G D +L L+KG ++ A +V
Sbjct: 92 MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDV----ILCTKLIKGFFTLRNIPKAVRVM 147
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ +N LI+G+CK ++DDA + + M + FSPD V+Y I C
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
L ++ C+P+VITYTI++ A ++EALK+ ++M S PD Y+
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
++I + K G V A E+ +++ +G P+V++YN ++ + + + E KL+ KM +
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C P+ TY+ L+ CR +++ LL M + ++ DA +Y L+ G+L++A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 496 CSFFEEMISKGIVP 509
F E MIS G +P
Sbjct: 388 IEFLETMISDGCLP 401
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/394 (26%), Positives = 190/394 (48%), Gaps = 13/394 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN M+ L K L +++ ++ +N ++ T + ++ + G D+A++ M
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLS-DNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G++ D + ++ + K V+ A+++ LE K C P +NIL+ K
Sbjct: 255 LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP-DVISYNILLRALLNQGK 313
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++ +K M +MF + P+VV+Y+ I CR+ + + LK M+EKG P +Y
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ A + +++ A++ E M SD CLPD Y++++ L K G+ A EIF + + G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PN +YNTM S+ + ++ AL ++ +M + PD TY ++ CR+ +
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL M + TY ++ G ++ ++E A + E M+ G P +TY +L E +
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Query: 522 -------EKKRLGNAKERINKLLAHA--KEQKTF 546
E L N RI+ + ++ + +TF
Sbjct: 554 GFAGYRAEAMELANDLVRIDAISEYSFKRLHRTF 587
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 137/288 (47%), Gaps = 1/288 (0%)
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+DT+ L + + GN +E + + + + LI G+ R + A + M
Sbjct: 88 RDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM 147
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
E+ ++ PDV +Y I +C+ L M+ K P +TY I++ +L
Sbjct: 148 -EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+++ ALKV ++ SD+C P Y+ LI G V +A ++ ++M +G+ P++ TY
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
NT+I C + A ++++ +E C+PD +Y LL+ + + + L+T MF
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ TY+ L+ L GK+E A + + M KG+ P +Y L
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
++G ++ + E M ++G P+V+ +I A+++++ +E+ +PD
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK-FGQPDVF 159
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y L+ C+ R+ +L M D S D TY ++ L GKL+LA ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 503 ISKGIVPYHSTYKMLEE 519
+S P TY +L E
Sbjct: 220 LSDNCQPTVITYTILIE 236
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/472 (25%), Positives = 217/472 (45%), Gaps = 22/472 (4%)
Query: 69 LAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL--------KG 120
L G+ S R++E + ++ ++ + + ++ + +K EA+ KG
Sbjct: 772 LNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLH-NKASEAMALIDRMVAKG 830
Query: 121 C--GVSVSNSLVEQTLRRFSNDLTPAFGFFT---WAKTQTGYMHTPEMYNTMVDVLGKSK 175
C + +V +R DL AF K + G + +YNT++D L K K
Sbjct: 831 CQPDLVTYGVVVNGLCKRGDTDL--AFNLLNKMEQGKLEPGVL----IYNTIIDGLCKYK 884
Query: 176 KFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRAL 235
L KEM E ++ T S+++ L GR+ DA M + + D
Sbjct: 885 HMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 943
Query: 236 SVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQ 294
S L+D VK + A K++ E K I S ++ LI+G+C ++D+A++ + M
Sbjct: 944 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 1003
Query: 295 QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
+ PDVV+Y I+ +C+ K + + +EM ++G + +TY I++ L +A +
Sbjct: 1004 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 1063
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A +++++M SD P+ Y++L+ L K G+++ A +FE +++ + P + TYN MI
Sbjct: 1064 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 1123
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C + E+ L + KPD Y ++ CRK + + L M ++
Sbjct: 1124 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 1183
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
++G Y +L+R + G E + +EM S G ST ++ L RL
Sbjct: 1184 NSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRL 1235
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 168/330 (50%), Gaps = 1/330 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T+ +++ R R DAV M + G + D A + ++D+L K V A+ F E
Sbjct: 259 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE 318
Query: 258 F-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ I + + L++G C + + DA + + +M ++ +P+V++Y+ ++ + +
Sbjct: 319 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 378
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + +EM P ++TY+ +++ L +I+EA ++++ M S CL D Y++
Sbjct: 379 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 438
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI KA RV+D ++F +M ++G+V N +TYNT+I + + A + +M+
Sbjct: 439 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 498
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY LL C ++ + M K ++ +D TY +++RG+ ++GK+E A
Sbjct: 499 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 558
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
S F + KG+ P TY + L K L
Sbjct: 559 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 588
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 166/330 (50%), Gaps = 11/330 (3%)
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+ S+ + ++ +V+ +YD + + M+ G+ D +++++ V A
Sbjct: 185 FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 244
Query: 254 VFLEF------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
+ + D + + S L++G+C+ +V DA + +M + G+ PD+V+Y
Sbjct: 245 ILGKMLKLGYEPDRVTIGS-----LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 299
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I+ C+ K D KE++ KG +P+V+TYT +++ L + + ++A ++ M
Sbjct: 300 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 359
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P+ YS+L+ K G+V +A E+FE+M + + P+++TY+++I+ C + A +
Sbjct: 360 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 419
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+ M C D +Y L+ C+ KR++ L M + + + TY +L++G
Sbjct: 420 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 479
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKML 517
++G ++ A FF +M GI P TY +L
Sbjct: 480 QAGDVDKAQEFFSQMDFFGISPDIWTYNIL 509
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 94/371 (25%), Positives = 181/371 (48%), Gaps = 6/371 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G H Y+ +++ + + L ++ +M +L GY ++ T+S+++ R
Sbjct: 725 GIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKL--GYEPNIVTLSSLLNGYCHSKRIS 782
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
+AV M G + +T + L+ L N A + + K C P + ++
Sbjct: 783 EAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQP-DLVTYGVV 841
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
++G CK D A + +M Q P V+ Y I+ C+ K + KEM+ KG
Sbjct: 842 VNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGI 901
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+P+V+TY+ ++ L + ++A ++ M PD +S+LI K G++ +A +
Sbjct: 902 RPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEK 961
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
++++M K+ + P+++TY+++I+ C + A ++ + M C PD TY L+K C
Sbjct: 962 LYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFC 1021
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ KR++ + M + + + TY L++GL ++G ++A F+EM+S G+ P
Sbjct: 1022 KYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIM 1081
Query: 513 TYKMLEEKLEK 523
TY L + L K
Sbjct: 1082 TYNTLLDGLCK 1092
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 184/419 (43%), Gaps = 40/419 (9%)
Query: 100 ISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMH 159
+ K+L Y+ PD+V SLV RR N ++ A + GY
Sbjct: 246 LGKMLKLGYE-PDRVTIG----------SLVNGFCRR--NRVSDAVSLVD-KMVEIGYKP 291
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
YN ++D L K+K+ ++ KE+ E ++ T + ++ L R+ DA
Sbjct: 292 DIVAYNAIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARL 350
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCK 278
M K + + S L+D VK V A ++F E + I ++ LI+G C
Sbjct: 351 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 410
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKPS 335
++D+A + M +G DVVSY I +C+ K +V+D +K EM ++G +
Sbjct: 411 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK---RVEDGMKLFREMSQRGLVSN 467
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+TY ++ +A +++A + + +M PD Y+ L+ L G ++ A IFE
Sbjct: 468 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 527
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
DM+K+ + +++TY T+I C + E A L + KPD TY ++ C K
Sbjct: 528 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 587
Query: 456 RMKVLNFLLTHM-----FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ + L T M KND ++ G + L+ ++M+S G P
Sbjct: 588 LLHEVEALYTKMKQEGLMKNDCTL-------------SDGDITLSAELIKKMLSCGYAP 633
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 136/306 (44%), Gaps = 36/306 (11%)
Query: 248 VEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
++ A +F E P S I F+ L+ K K D ++M G + +Y+
Sbjct: 676 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 735
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I +CR L +M + G +P+++T + +++ +K+I+EA+ + ++M
Sbjct: 736 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
P+T +++LI L + +A + + M +G P+++TY +++ C R + + A
Sbjct: 796 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855
Query: 427 KLLQKMEE---------------DLCK--------------------PDCETYAPLLKMC 451
LL KME+ LCK P+ TY+ L+
Sbjct: 856 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 915
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C R + LL+ M + ++ D T+++L+ ++ GKL A ++EM+ + I P
Sbjct: 916 CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 975
Query: 512 STYKML 517
TY L
Sbjct: 976 VTYSSL 981
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 4/244 (1%)
Query: 278 KTR----KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
KTR K++DA +M + P +V + + + K + V K+M+ G +
Sbjct: 161 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 220
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+ T+ IV++ Q++ AL + KM PD SL+ + RV DA +
Sbjct: 221 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 280
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+ M + G P+++ YN +I S C +A +++E +P+ TY L+ C
Sbjct: 281 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 340
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
R LL+ M K ++ + TY++L+ +++GK+ A FEEM+ I P T
Sbjct: 341 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 400
Query: 514 YKML 517
Y L
Sbjct: 401 YSSL 404
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 3/222 (1%)
Query: 313 REKDFRKVD--DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
R +D + D D +M + PS++ + ++ A+ K K+ + + + +KM+ D
Sbjct: 163 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 222
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
++ +I +V A I M K G P+ +T ++++ C R+ +A+ L+
Sbjct: 223 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 282
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
KM E KPD Y ++ C+ KR+ + + + + TY +LV GL S
Sbjct: 283 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 342
Query: 491 KLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKE 531
+ A +MI K I P TY +L+ ++ ++ AKE
Sbjct: 343 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 384
>gi|449519571|ref|XP_004166808.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 503
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 210/435 (48%), Gaps = 16/435 (3%)
Query: 110 SPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT---QTGYMHTPEMYNT 166
S ++V AL G++ S LV++ LR N + A FF WA+ Q+ Y +N
Sbjct: 69 SRNEVDGALLATGLAPSPELVQEVLRVSYNSPSSAIKFFRWARQLAKQSAYS-----WNL 123
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
M+D+LGK++ F MW ++ M + +SL T ++ GR +A F M +Y
Sbjct: 124 MIDLLGKNELFEEMWNGIRTMRQ--EKILSLPTFVSVFGSYCSAGRSKEARMTFEVMDRY 181
Query: 227 GVEKDTRALSVLMDTLV-KGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDA 285
VEKD A++ L+ + + N A++ F + K+ IPL + F IL+ GW K V+ A
Sbjct: 182 EVEKDVVAVNSLLSAICSEENQTSEAWEFFEKHKEKIPLDGESFAILLEGWEKEGNVEKA 241
Query: 286 QKAMKEMFQQ-GFSP-DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+ EM ++ G++P +V SY F+ R L ++++ C P + + +
Sbjct: 242 KVTFDEMVKRVGWNPENVSSYDAFLITLVRGGRSEDAIKVLLKLKKNRCLPGLKFLSNAL 301
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+L + N A+ +++ + +P+ Y+++I +LS+ ++ D+ + + M G
Sbjct: 302 DSLIQQNDANHAILLWDIVVGSGLVPNLIVYNAIIGLLSENSKIDDSFRLLDSMVFHGAF 361
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
PN LTYN + SS + + + ++M ++ C P + A + M + +
Sbjct: 362 PNSLTYNLIFSSLIKNKKVKEVSQFFREMVKNECPPTPSSCAAAITMLFDGYDPETAIDI 421
Query: 464 LTHMFKNDVS-MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
+M +N + MD A L+ GL +L F ++MI + I ST K+L+
Sbjct: 422 WNYMDENHIEPMDTSANALLI-GLCNLNRLTEVRRFADDMIDQRIDILESTMKLLKNCFY 480
Query: 523 KKRLGNAKERINKLL 537
++R GN +E + LL
Sbjct: 481 QQR-GNFRENYDGLL 494
>gi|326488077|dbj|BAJ89877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 395
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 148/286 (51%), Gaps = 4/286 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ ++D +GKS + M ++ +EM N GY S T +TI+ LV+ D+A+ +
Sbjct: 107 YHLILDAMGKSMRIEDMLKIQEEMH--NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQ 164
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
+ G L+D L+K ++E A +F E +C + I+NIL++G+
Sbjct: 165 LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGD 224
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ + + M +QG +PD+ SYT I+ C + K++ + G +P +ITY +
Sbjct: 225 TEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNL 284
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H LGK+ ++ EAL +Y M+ P+ Y+SLI L KAG+ +A +++E++ +G
Sbjct: 285 LIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKG 344
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
PNV TYN +I ENA +M C+P+ TY L
Sbjct: 345 WKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 390
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 175/398 (43%), Gaps = 9/398 (2%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
+SL+E L+R D T F +G + + ++ L K K+ ELVK+
Sbjct: 3 HSLMEGILKR---DGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKK 59
Query: 187 MDELNNGYVSLATMS--TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
+ L VSL T S ++ LV D A E F MK+ G + D +++D + K
Sbjct: 60 FENLG---VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGK 116
Query: 245 GNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
+E K+ E + S+ + +N +I G K++ +D+A ++ +GFSP +
Sbjct: 117 SMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCT 176
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y ++ ++ + + EM E GC+P+ Y I+++ A + +++E M
Sbjct: 177 YGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMV 236
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
PD Y+ +I L GR+ D F+ + G+ P+++TYN +I E
Sbjct: 237 EQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSGRLE 296
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
AL L ME+ P+ TY L+ + + + + + TY +L+
Sbjct: 297 EALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYNALI 356
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
RG SG E A + + MI G P STY L ++
Sbjct: 357 RGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPNQM 394
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/329 (22%), Positives = 144/329 (43%), Gaps = 42/329 (12%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
++ ++M +++ + ++E + G+ D LS ++ L K A+++ +F
Sbjct: 1 SVHSLMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKF 60
Query: 259 KDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
++ + L + +N LI G +D A++ EM + G PD +Y ++ +
Sbjct: 61 ENLGVSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKS--- 117
Query: 318 RKVDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+++D LK EM KG K + +TY ++ L K+K ++EA+ +Y ++ S+ P Y
Sbjct: 118 MRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTY 177
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
L+ L K G ++DA +F++M + G PN YN +++ + E +L + M E
Sbjct: 178 GPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVE 237
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD ++Y ++ C G+L
Sbjct: 238 QGMNPDIKSYTVVIDTLCA-----------------------------------DGRLND 262
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
S+F+++ G+ P TY +L L K
Sbjct: 263 GLSYFKQLTDMGLEPDLITYNLLIHGLGK 291
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 118/271 (43%), Gaps = 6/271 (2%)
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+ G K + + + + + G D + + I H C+ K+ + +K+ + G
Sbjct: 5 LMEGILKRDGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLG 64
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+Y ++ L I+ A +++ +MK C PD Y ++ + K+ R++D
Sbjct: 65 VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDML 124
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+I E+M +G +TYNT+IS + A+ L ++ + P TY PLL
Sbjct: 125 KIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGL 184
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
+ ++ L M + + Y L+ G +G E C FE M+ +G+ P
Sbjct: 185 LKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDI 244
Query: 512 STYKMLEEKLEKKRLGNAKERINKLLAHAKE 542
+Y ++ + L A R+N L++ K+
Sbjct: 245 KSYTVVIDTL------CADGRLNDGLSYFKQ 269
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 169/343 (49%), Gaps = 5/343 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
++++R R G+ A +++ G D +VL+ K +++A +V L+ +
Sbjct: 153 TSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV-LDRMN 211
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P +N ++ C + K+ A + + Q+ PDV++YT IE C+E +
Sbjct: 212 VAP-DVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQA 270
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
L EM+ KG KP V+TY ++++ + K +++EA+K M S C P+ ++ ++
Sbjct: 271 MKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRS 330
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ GR DA ++ DM ++G P+V+T+N +I+ C + A+ +L+KM C P+
Sbjct: 331 MCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPN 390
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
+Y PLL C++K+M L M D TY +L+ L + GK+++A
Sbjct: 391 SLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILN 450
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
++ SKG P TY + + L K ER KLL + +
Sbjct: 451 QLSSKGCSPVLITYNTVIDGLSKV---GKTERAIKLLDEMRRK 490
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 182/375 (48%), Gaps = 6/375 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ L S K E++ + Y + T + ++ + A++ M
Sbjct: 219 YNTILRTLCDSGKLKQAMEVLDRQLQ-KECYPDVITYTILIEATCKESGVGQAMKLLDEM 277
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ G + D +VL++ + K ++ A K + C P + NI++ C T +
Sbjct: 278 RNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQP-NVITHNIILRSMCSTGR 336
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
DA+K + +M ++G SP VV++ I CR+ + D L++M GC P+ ++Y
Sbjct: 337 WMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNP 396
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H K K+++ A++ + M S C PD Y++L+ L K G+V A EI + +G
Sbjct: 397 LLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKG 456
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P ++TYNT+I + E A+KLL +M KPD TY+ L+ R+ ++
Sbjct: 457 CSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAI 516
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ + +A TY S++ GL +S + + A F MISK P +TY +L E +
Sbjct: 517 KFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGI 576
Query: 522 EKKRLGNAKERINKL 536
+ G AKE ++ L
Sbjct: 577 AYE--GLAKEALDLL 589
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/381 (25%), Positives = 181/381 (47%), Gaps = 8/381 (2%)
Query: 149 TWAKT---QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMR 205
TW Q+G + YN ++ KS + +++ M N + T +TI+R
Sbjct: 169 TWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRM----NVAPDVVTYNTILR 224
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS 265
L G+ A+E + D ++L++ K + V A K+ E ++
Sbjct: 225 TLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKP 284
Query: 266 SQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ +N+LI+G CK ++D+A K + M G P+V+++ + C + + L
Sbjct: 285 DVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLL 344
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+M KGC PSV+T+ I+++ L + + A+ + EKM C P++ Y+ L+ K
Sbjct: 345 SDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKE 404
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
++ A E + M +G P+++TYNT++++ C + + A+++L ++ C P TY
Sbjct: 405 KKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITY 464
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
++ + + + LL M + + D TY+SLV GL GK++ A FF ++
Sbjct: 465 NTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEG 524
Query: 505 KGIVPYHSTYKMLEEKLEKKR 525
GI P TY + L K R
Sbjct: 525 LGIRPNAITYNSIMLGLCKSR 545
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/357 (28%), Positives = 164/357 (45%), Gaps = 12/357 (3%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
+GK+KK W V E+ E + + T + ++ + G D+A++ + + V
Sbjct: 162 IGKTKK--ATW--VMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV---LDRMNVAP 214
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
D + ++ TL ++ A +V L+ K+C P + ILI CK V A K
Sbjct: 215 DVVTYNTILRTLCDSGKLKQAMEVLDRQLQ-KECYP-DVITYTILIEATCKESGVGQAMK 272
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+ EM +G PDVV+Y I C+E + L M GC+P+VIT+ I++ ++
Sbjct: 273 LLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMC 332
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
+ +A K+ M C P ++ LI L + G + A +I E M G PN L
Sbjct: 333 STGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSL 392
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
+YN ++ C + + A++ L M C PD TY LL C+ ++ V +L +
Sbjct: 393 SYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQL 452
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
S TY +++ GL + GK E A +EM KG+ P TY L L ++
Sbjct: 453 SSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSRE 509
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/334 (24%), Positives = 173/334 (51%), Gaps = 7/334 (2%)
Query: 180 MWELVKEMDELNN--GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
+ + +K +DE+ N + T + ++ + + GR D+A++ M YG + + ++
Sbjct: 267 VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 326
Query: 238 LMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
++ ++ A K+ + K C P S FNILI+ C+ + A +++M
Sbjct: 327 ILRSMCSTGRWMDAEKLLSDMLRKGCSP-SVVTFNILINFLCRQGLLGRAIDILEKMPMH 385
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G +P+ +SY + +C+EK + + L M +GC P ++TY ++ AL K +++ A
Sbjct: 386 GCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVA 445
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+++ ++ S C P Y+++I LSK G+ + A ++ ++M+++G+ P+++TY++++S
Sbjct: 446 VEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSG 505
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETY-APLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
+ + A+K +E +P+ TY + +L +C ++ + ++F L +M
Sbjct: 506 LSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF-LAYMISKRCKP 564
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
TY L+ G+ G + A E+ S+G+V
Sbjct: 565 TEATYTILIEGIAYEGLAKEALDLLNELCSRGLV 598
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 3/139 (2%)
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L + G ++D + E M +G +P+++ ++I C + + A +++ +E+ PD
Sbjct: 124 LVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPD 183
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ C+ + +L M +V+ D TY +++R L +SGKL+ A +
Sbjct: 184 VITYNVLISGYCKSGEIDNALQVLDRM---NVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 501 EMISKGIVPYHSTYKMLEE 519
+ K P TY +L E
Sbjct: 241 RQLQKECYPDVITYTILIE 259
>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g16010-like [Vitis vinifera]
Length = 725
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 201/413 (48%), Gaps = 16/413 (3%)
Query: 98 DKISKILSKQYQSPD--KVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
++ +IL PD K +E LK + V + LV + L+ ++ FF WA +
Sbjct: 63 ERFIRILKIFKWGPDAEKALEVLK---LKVDHRLVREVLK-IDVEIHVKIQFFKWAGKRR 118
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
+ H Y ++ L ++ MW+ ++EM + + A +S I++ L + +
Sbjct: 119 NFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVR-STCVIGPADLSEIVKVLGKAKMVNK 177
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQIFNIL 272
A+ F +K + + + ++ L++ E ++++ E DC+P + ++ L
Sbjct: 178 ALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLP-DTVTYSAL 236
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I + K + D A EM + G P YT + Y + K ++EM+EKGC
Sbjct: 237 IAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGC 296
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+V TYT ++ +GKA ++ EA ++ M + C PD ++LI +L KAGR+ DA +
Sbjct: 297 ALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIK 356
Query: 393 IFEDMKKQGVVPNVLTYNTMISS---ACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
+FE+M+ PNV+TYNT+I + + AR+ E A +KM+E+ P TY+ L+
Sbjct: 357 LFEEMESLQCTPNVVTYNTVIKALFESKARASE--AFLWYEKMKENGVVPSSFTYSILID 414
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
C+ R++ LL M + + Y SL+ L ++ + E A F+E+
Sbjct: 415 GFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQEL 467
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 182/373 (48%), Gaps = 5/373 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G T ++Y T++ + K + LV+EM E +++ T + +++ + + G+
Sbjct: 258 ENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKE-KGCALTVYTYTELIKGVGKAGKV 316
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNI 271
++A F M K G + D ++ L++ L K + A K+F E + C P + +N
Sbjct: 317 EEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTP-NVVTYNT 375
Query: 272 LIHGWCKTR-KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+I +++ + +A ++M + G P +Y+ I+ +C+ K L+EM EK
Sbjct: 376 VIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEK 435
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P Y +++ALGKAK+ A +++++++ + Y+ +I L K GR+ +A
Sbjct: 436 GFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEA 495
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
++F +MKK G P+V YN ++S + A LL+ MEE+ C PD ++ +L
Sbjct: 496 VDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNG 555
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
R K + T M + + D +Y +++ L +G E A +EM SKG
Sbjct: 556 FARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYD 615
Query: 511 HSTYKMLEEKLEK 523
TY + E + K
Sbjct: 616 LITYSSILEAVGK 628
>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
Length = 1041
Score = 151 bits (382), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/390 (27%), Positives = 188/390 (48%), Gaps = 14/390 (3%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
+ YN M++ K + + +L+ EM + +N + T I+ L R G +DA F
Sbjct: 412 QTYNNMIEGYLKEQNTSRVKDLLSEMKK-SNLVPTAYTCGMIINGLCRHGSIEDASRVFE 470
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-----KDCIPLSSQIFNILIHGW 276
M GV+ + +V+ TL+KG+ E ++ + K + +N +I G
Sbjct: 471 IMVSLGVKPN----AVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK+RK+++A+ + EM ++G P+V +Y I YC+ + + D KEM G P+
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+ T ++ K EA ++ M PD YS+LI L + G+++ A E+ +
Sbjct: 587 VVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSE 646
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
++G+VP+V TYN++IS C + A +L + M + P+ TY L+ C+
Sbjct: 647 FLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGE 706
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ L + ++ +A TYA+++ G +SG L A F+EM KG+ P Y
Sbjct: 707 IERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSA 766
Query: 517 LEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
L + K+ GN ++ ++ L QK F
Sbjct: 767 LIDGCRKE--GNTEKALSLFLESV--QKGF 792
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 153/319 (47%), Gaps = 1/319 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FK 259
+T+++ V+ GR+ +AV + M K GV+ D + ++ L K +E A +E +
Sbjct: 485 TTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIE 544
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ + + LIHG+CK+ ++ A + KEM G +P+ V T I+ YC+E +
Sbjct: 545 RGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTE 604
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ M + P V TY+ ++H L + ++ A+++ + +PD Y+S+I
Sbjct: 605 ATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIIS 664
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
K G + A ++ E M ++G+ PN++TYN +I+ C E E A +L +
Sbjct: 665 GFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAH 724
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
+ TYA ++ C+ + L M V D+ Y++L+ G + G E A S F
Sbjct: 725 NAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLF 784
Query: 500 EEMISKGIVPYHSTYKMLE 518
E + KG S +++
Sbjct: 785 LESVQKGFASTSSLNALMD 803
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 106/388 (27%), Positives = 176/388 (45%), Gaps = 39/388 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ L ++ + +EL K MD+ G V+ + T S ++ + R +A
Sbjct: 274 YNVVIGGLCRAGEVDEAFELKKLMDK--KGLVADVFTYSILIDGFGKQKRCTEAKLMLEE 331
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M G++ A + L+D ++ A++V E + L+ +N L+ G CK
Sbjct: 332 MFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGD 391
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++ A + EM G PD +Y IE Y +E++ +V D L EM++ P+ T +
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGM 451
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ L + I +A +V+E M S P+ Y++LI + GR ++A I + M K+G
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V P+VL YN++I C + E A L +M E KP+ TY L+ C+ M+V +
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVAD 571
Query: 462 FLLTHMFK-----NDVSM------------------------------DAGTYASLVRGL 486
M NDV D TY++L+ GL
Sbjct: 572 RYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGL 631
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTY 514
+ +GKL+ A E + KG+VP TY
Sbjct: 632 LRNGKLQGAMELLSEFLEKGLVPDVFTY 659
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 112/463 (24%), Positives = 205/463 (44%), Gaps = 45/463 (9%)
Query: 90 SENHETDVDKISKILS-KQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFF 148
++N+ V++I+ L+ K ++S +V +S +V + + ND FF
Sbjct: 35 TQNNSNIVNEITTFLNQKNWESLLPLVSN------KLSPDVVHSVITKQVNDPKRLLDFF 88
Query: 149 TWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS------------ 196
W + Q G+ + ++ + +L S+ F +V +M +++G S
Sbjct: 89 NWVQFQMGFSQKLQSFSILALILCNSRLFSRADSVVNQMIMMSSGGYSEILDSLIKSCKE 148
Query: 197 -------------LATMSTIMRRLVRG----GRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+ L+ G G +D+AV F G K+ G + L+
Sbjct: 149 FDLNNVNGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLL 208
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI-----LIHGWCKTRKVDDAQKAMKEMFQ 294
L+K N +E +F F + + ++ + ++ LI+ + + ++ + EM +
Sbjct: 209 SDLLKANKLE----LFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEE 264
Query: 295 QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
+G SP +V+Y I CR + + + K M +KG V TY+I++ GK K+ E
Sbjct: 265 KGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTE 324
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A + E+M S P Y++LI + G +A + E+M +GV N+ TYN ++
Sbjct: 325 AKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVK 384
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C + E A LL +M KPD +TY +++ +++ + LL+ M K+++
Sbjct: 385 GVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVP 444
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
A T ++ GL G +E A FE M+S G+ P Y L
Sbjct: 445 TAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTL 487
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 146/309 (47%), Gaps = 4/309 (1%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQI 268
G +A FR M V D R S L+ L++ ++ A ++ EF K +P
Sbjct: 600 GSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVP-DVFT 658
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N +I G+CK + A + + M Q+G SP++++Y I C+ + + + +
Sbjct: 659 YNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERARELFDGIP 718
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
KG + +TY ++ K+ +++A +++++M PD+ YS+LI K G +
Sbjct: 719 GKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTE 778
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
A +F + ++G + N ++ C + A +LL+ M + KPD TY L+
Sbjct: 779 KALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILI 837
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+ +K M K ++ +A TY +L+ G +G+ + F+EMI+K I
Sbjct: 838 DYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIE 897
Query: 509 PYHSTYKML 517
P T+ ++
Sbjct: 898 PDGVTWSVM 906
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 142/307 (46%), Gaps = 4/307 (1%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T +TI+ + G A F M GV D+ S L+D K + E A +FLE
Sbjct: 727 VTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLE 786
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
S+ N L+ G+CK+ KV +A + +++M + PD V+YT I+++C+
Sbjct: 787 SVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFL 846
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
++ + +MQ++ P+ +TYT ++ A + +E ++++M + D PD +S +
Sbjct: 847 KEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVM 906
Query: 378 IFILSKAGRVKDANEIFEDMKKQG--VVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
I K G ++ +DM K+G V NV + +I C + LK+L+K+EE
Sbjct: 907 IDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVC--HVLIDPLCRKEHVSEVLKVLEKIEEQ 964
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
T + L++ + +M +L M + D+ L+ +S E A
Sbjct: 965 GLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELNDLINVEQDSTDSENA 1024
Query: 496 CSFFEEM 502
F ++M
Sbjct: 1025 GDFLKQM 1031
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 154/318 (48%), Gaps = 8/318 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + ++ L + G + A E F G+ G+ + + ++D K ++ A+++F
Sbjct: 690 NIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLF 749
Query: 256 LEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E +P S +++ LI G K + A E Q+GF+ S ++ +C+
Sbjct: 750 DEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAS-TSSLNALMDGFCKS 808
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + L++M +K KP +TYTI++ K + EA + + M+ + +P+ Y
Sbjct: 809 GKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTY 868
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++L+ + AGR + +F++M + + P+ +T++ MI + + LKL+ M +
Sbjct: 869 TALLSGYNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLK 928
Query: 435 ---DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
++ K C L+ CRK+ + + +L + + +++ T ++LVR ++GK
Sbjct: 929 KGGNVSKNVCHV---LIDPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGK 985
Query: 492 LELACSFFEEMISKGIVP 509
++ A + M+ VP
Sbjct: 986 MDGAARVLKSMVRFKWVP 1003
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 104/252 (41%), Gaps = 11/252 (4%)
Query: 279 TRKVDDAQKAMK----EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
T++V+D ++ + FQ GFS + S++ C + F + D + +M
Sbjct: 75 TKQVNDPKRLLDFFNWVQFQMGFSQKLQSFSILALILCNSRLFSRADSVVNQM----IMM 130
Query: 335 SVITYTIVMHALGKA-KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
S Y+ ++ +L K+ K+ + L ++ + + LI K G +A
Sbjct: 131 SSGGYSEILDSLIKSCKEFD--LNNVNGNENSNNNDRGVVFELLIDGYKKKGLFDEAVSF 188
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
F K+ G V +L N ++S ++ E + M E D TY L+ R
Sbjct: 189 FLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFR 248
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
K LL M + S TY ++ GL +G+++ A + M KG+V T
Sbjct: 249 AGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFT 308
Query: 514 YKMLEEKLEKKR 525
Y +L + K++
Sbjct: 309 YSILIDGFGKQK 320
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 95/329 (28%), Positives = 160/329 (48%), Gaps = 7/329 (2%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI 271
R + A+E F+ MK GVE D + +L+ L + A+ +F C P +N+
Sbjct: 156 RLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT-CSP-DIMTYNV 213
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+ G+CK + +AQ MKE+ + G+ P+V +Y+ I YC+ + + +M E
Sbjct: 214 LMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESN 273
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA-GRVKDA 390
C P+ +T+ ++ KA + +A+K++ +M+ C Y++LI L K G V A
Sbjct: 274 CVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTA 333
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
++F ++ G+ P ++TYN++I C A++ +ME C P+ TY+ L+
Sbjct: 334 VDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDG 392
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ +RMK L M + + TY L+ G + G+L+ A FFE+M G P
Sbjct: 393 LCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPN 452
Query: 511 HSTYKMLEEKLEKKRLGNAKERINKLLAH 539
+ L + L K N R LL H
Sbjct: 453 TVIFNTLIDGLCKAERANDGLR---LLCH 478
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 107/397 (26%), Positives = 190/397 (47%), Gaps = 19/397 (4%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
+N L A FF K +G E Y+ ++ L S + L M +
Sbjct: 154 ANRLEQAMEFFKEMKA-SGVEPDLESYHILLSALSDSGRMAEAHALFSAM----TCSPDI 208
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T + +M + G+ +A + + K G E + S++++ K + VE A++VF++
Sbjct: 209 MTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMK 268
Query: 258 F--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+C+P ++ FN LI G+CK ++DA K EM + G +V+Y I+ C+++
Sbjct: 269 MIESNCVP-NAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKR 327
Query: 316 D-FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
D +++ G P+++TY ++ A++++EA++ +++M+ C P+ Y
Sbjct: 328 GGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITY 386
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S LI L K R+K+A + EDMK G P V+TY +I+ C E ++AL +KM+
Sbjct: 387 SILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKL 446
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C P+ + L+ C+ +R LL HM D TY L+ GL + ++E
Sbjct: 447 AGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVED 506
Query: 495 ACSFFEEMISKGIVPYHSTYKML------EEKLEKKR 525
A F+ M P +T+ L ++K+E+ R
Sbjct: 507 AQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEAR 540
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 147/312 (47%), Gaps = 40/312 (12%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ GY Y+ +++ K K WE+ +M E +N + T +T++ + G
Sbjct: 236 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE-SNCVPNAVTFNTLIAGFCKAGML 294
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG-----------NSVEHA--------YKV 254
+DA++ F M+K G + + L+D+L K N +E A Y
Sbjct: 295 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNS 354
Query: 255 FLE-FKDCIPLSSQI----------------FNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
++ F D LS + ++ILI G CK R++ +A K +++M G+
Sbjct: 355 LIQGFCDARRLSEAMQYFDEMEGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGY 414
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+P VV+Y I +C+ + + ++M+ GC P+ + + ++ L KA++ N+ L+
Sbjct: 415 TPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLR 474
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ M ++ C PD Y+ LI L A RV+DA +F+ M PNV T+N +I C
Sbjct: 475 LLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLC 531
Query: 418 ARSEEENALKLL 429
A+ + E A +L
Sbjct: 532 AQKKVEEARNIL 543
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/343 (24%), Positives = 160/343 (46%), Gaps = 10/343 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ LV ++D A+ F+ + + +VL+ KG + A VF + K
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 261 CIPL-SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
L ++ N L+ G C+ ++ A K +EM F P S+ + + R
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHAL----GKAKQINEALKVYEKMKSDDCLPDTSFYS 375
L++M++ + TY +V+ L A ++ +A++ +++MK+ PD Y
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
L+ LS +GR+ +A+ +F M P+++TYN ++ C + A L++++ +
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
+P+ TY+ ++ C+ +++ + M +++ +A T+ +L+ G ++G LE A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKRLG--NAKERINKL 536
F EM G TY L + L KKR G A + NKL
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 340
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 93/209 (44%), Gaps = 10/209 (4%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRY 213
G T YN+++ +++ + E ++ DE+ ++ T S ++ L + R
Sbjct: 343 AGLTPTIVTYNSLIQGFCDARR---LSEAMQYFDEMEGKCAPNVITYSILIDGLCKVRRM 399
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNI 271
+A + MK +G L++ K ++ A F ++ C P ++ IFN
Sbjct: 400 KEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAP-NTVIFNT 458
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G CK + +D + + M +G PDV++Y C I C +V+D +
Sbjct: 459 LIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSAN---RVEDAQRLFDGMA 515
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYE 360
C P+V T+ ++ L K++ EA + +
Sbjct: 516 CAPNVTTFNFLIRGLCAQKKVEEARNILD 544
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 168/328 (51%), Gaps = 1/328 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T +++ + + G+ A+E R M++ ++ D S+++D L K S+++A+ +F E
Sbjct: 213 VTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 272
Query: 258 FK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ I+ LI G+C + DD K +++M ++ +PDVV+++ I+ + +E
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
R+ ++ KEM ++G P +TYT ++ K Q+++A + + M S C P+ ++
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI KA + D E+F M +GVV + +TYNT+I C + E A +L Q+M
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+PD +Y LL C + + + K+ + +D G Y ++ G+ + K++ A
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 512
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKK 524
F + KG+ P TY ++ L KK
Sbjct: 513 DLFCSLPLKGVKPDVKTYNIMIGGLCKK 540
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 177/366 (48%), Gaps = 2/366 (0%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+TG+ Y ++ V+ KS + L EL+++M+E + S I+ L + G
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE-RKIKLDAVKYSIIIDGLCKDGS 262
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNI 271
D+A F M+ G + D + L+ + K+ + K I F+
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI + K K+ +A++ KEM Q+G SPD V+YT I+ +C+E K + L M KG
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C P++ T+ I+++ KA I++ L+++ KM + DT Y++LI + G+++ A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
E+F++M + V P++++Y ++ C E E AL++ +K+E+ + D Y ++
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C ++ L + V D TY ++ GL + G L A F +M G P
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 512 STYKML 517
TY +L
Sbjct: 563 CTYNIL 568
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 176/394 (44%), Gaps = 37/394 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
++ + V+ ++K++ L+ +L K+M EL +L T+S ++ R + A A +
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQM-ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKI 133
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
K G E DT S L++ L V A ++ + + I N L++G C KV
Sbjct: 134 IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKV 193
Query: 283 DDAQKAMKEMFQQGFSP-----------------------------------DVVSYTCF 307
DA + M + GF P D V Y+
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I+ C++ + EM+ KG K +I YT ++ A + ++ K+ M
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
PD +S+LI K G++++A E+ ++M ++G+ P+ +TY ++I C ++ + A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+L M C P+ T+ L+ C+ + L M V D TY +L++G
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
E GKLE+A F+EM+S+ + P +YK+L + L
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 171/412 (41%), Gaps = 63/412 (15%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++D L K + L EM E+ + +T++R GR+DD + R M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF------------------------- 258
K + D A S L+D VK + A ++ E
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 259 ------------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
K C P + + FNILI+G+CK +DD + ++M +G D V+Y
Sbjct: 369 DKANHMLDLMVSKGCGP-NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I+ +C + +EM + +P +++Y I++ L + +AL+++EK++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
D Y+ +I + A +V DA ++F + +GV P+V TYN MI C + A
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 427 KLLQKMEEDLCKPDCETYAPL-------------------LKMCCRKKRMKVLNFLLT-- 465
L +KMEED P+ TY L +K C L F L+
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTL 607
Query: 466 -HMFKNDVSMDAGTYASLVRG--LIESGKLELACSFFEEMISKGIVPYHSTY 514
M K D T+ +L+R L E+ + A + F+ M + G P TY
Sbjct: 608 ARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTY 659
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 149/333 (44%), Gaps = 27/333 (8%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N +++ K+ EL ++M L T +T+++ G+ + A E F+ M
Sbjct: 390 FNILINGYCKANLIDDGLELFRKM-SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEM 448
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
V D + +L+D L E A ++F + K + L I+NI+IHG C KV
Sbjct: 449 VSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKV 508
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
DDA + +G PDV +Y I C++ + D ++M+E G P+ TY I+
Sbjct: 509 DDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNIL 568
Query: 343 MHA-LGK------AKQINE---------------ALKVYEKMKSDDCLPDTSFYSSLI-- 378
+ A LG+ AK I E AL +M PD +++L+
Sbjct: 569 IRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRP 628
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
F L + V DA +F++MK G PNV+TYNT+I + +L +M E C+
Sbjct: 629 FCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQ 688
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
P+ T + + C K+ + LL +ND
Sbjct: 689 PNAVTKSTFISGLC-KQDLHGSAILLLRKMEND 720
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 117/226 (51%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA +EM + P ++ ++ R K + V D K+M+ KG ++ T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + ++++ A K+ PDT +S+LI L GRV +A E+ + M +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P ++T N +++ C + +A+ L+ +M E +P+ TY P+LK+ C+ + +
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
LL M + + +DA Y+ ++ GL + G L+ A + F EM KG
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 83/206 (40%), Gaps = 17/206 (8%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG-GRYDDAVEAFRG 222
YN M+ L K L ++M+E +G+ I+ R G G + +
Sbjct: 530 YNIMIGGLCKKGSLSEADLLFRKMEE--DGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC--KTR 280
+K+ G D L + TL + H VF F L+ +C +
Sbjct: 588 IKRCGFSVDASTLRFALSTLARMLKAGHEPDVF------------TFTTLLRPFCLEENA 635
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V DA K M G+ P+VV+Y I+ +V L +M E+GC+P+ +T +
Sbjct: 636 SVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKS 695
Query: 341 IVMHALGKAKQINEALKVYEKMKSDD 366
+ L K A+ + KM++D+
Sbjct: 696 TFISGLCKQDLHGSAILLLRKMENDN 721
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 156/314 (49%), Gaps = 8/314 (2%)
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG----NSVEHAYKVF 255
M I R R G Y +++ M + G D +L L+KG ++ A +V
Sbjct: 92 MLKIFHRSCRSGNYIESLHLLETMVRKGYNPDV----ILCTKLIKGFFTLRNIPKAVRVM 147
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ +N LI+G+CK ++DDA + + M + FSPD V+Y I C
Sbjct: 148 EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRG 207
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
L ++ C+P+VITYTI++ A ++EALK+ ++M S PD Y+
Sbjct: 208 KLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYN 267
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
++I + K G V A E+ +++ +G P+V++YN ++ + + + E KL+ KM +
Sbjct: 268 TIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSE 327
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
C P+ TY+ L+ CR +++ LL M + ++ DA +Y L+ G+L++A
Sbjct: 328 KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVA 387
Query: 496 CSFFEEMISKGIVP 509
F E MIS G +P
Sbjct: 388 IEFLETMISDGCLP 401
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 189/394 (47%), Gaps = 13/394 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN M+ L K L +++ ++ +N ++ T + ++ + G D+A++ M
Sbjct: 196 YNIMIGSLCSRGKLDLALKVLNQLLS-DNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G++ D + ++ + K V+ A+++ LE K P +NIL+ K
Sbjct: 255 LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEP-DVISYNILLRALLNQGK 313
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++ +K M +MF + P+VV+Y+ I CR+ + + LK M+EKG P +Y
Sbjct: 314 WEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP 373
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ A + +++ A++ E M SD CLPD Y++++ L K G+ A EIF + + G
Sbjct: 374 LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVG 433
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PN +YNTM S+ + ++ AL ++ +M + PD TY ++ CR+ +
Sbjct: 434 CSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAF 493
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL M + TY ++ G ++ ++E A + E M+ G P +TY +L E +
Sbjct: 494 ELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGI 553
Query: 522 -------EKKRLGNAKERINKLLAHA--KEQKTF 546
E L N RI+ + ++ + +TF
Sbjct: 554 GFAGYRAEAMELANDLVRIDAISEYSFKRLHRTF 587
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 136/288 (47%), Gaps = 1/288 (0%)
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+DT+ L + + GN +E + + + + LI G+ R + A + M
Sbjct: 88 RDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM 147
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
E+ ++ PDV +Y I +C+ L M+ K P +TY I++ +L
Sbjct: 148 -EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSR 206
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+++ ALKV ++ SD+C P Y+ LI G V +A ++ ++M +G+ P++ TY
Sbjct: 207 GKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTY 266
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
NT+I C + A ++++ +E +PD +Y LL+ + + + L+T MF
Sbjct: 267 NTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFS 326
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ TY+ L+ L GK+E A + + M KG+ P +Y L
Sbjct: 327 EKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPL 374
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 1/137 (0%)
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
++G ++ + E M ++G P+V+ +I A+++++ +E+ +PD
Sbjct: 101 RSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEK-FGQPDVF 159
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y L+ C+ R+ +L M D S D TY ++ L GKL+LA ++
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 503 ISKGIVPYHSTYKMLEE 519
+S P TY +L E
Sbjct: 220 LSDNCQPTVITYTILIE 236
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 155/300 (51%), Gaps = 3/300 (1%)
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWC 277
F+ M++ G + + ++D K + A+ FL L + FN++I+G C
Sbjct: 6 FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFG-FLRSMGLKGLEPNLITFNMIINGLC 64
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ ++ + + + EM ++G+ PD V+Y + YC+E +F + EM G P+V+
Sbjct: 65 RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYT +++++ KA +N A++ +++M P+ Y+++I ++ G + +A + +M
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ G +P+++TYN +I+ C E A+ LLQ M PD +Y+ ++ R + +
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ M V DA TY+SL++GL E +L AC F+EM++ + P TY L
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 92/342 (26%), Positives = 168/342 (49%), Gaps = 4/342 (1%)
Query: 185 KEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
KEM E N ++ T +T++ + R D+A R M G+E + +++++ L +
Sbjct: 7 KEM-ERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65
Query: 245 GNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
++ +V +E K +P +N L++G+CK A EM + G SP+VV
Sbjct: 66 DGRLKETSEVLVEMSRKGYVP-DEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+YT I C+ + + + +M +G P+ TYT +++ + ++EA +V +M
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+P Y++LI GR+++A + +DM +GV+P+V++Y+T+IS E
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+ A ++ +M PD TY+ L++ C ++R+ + M + D TY +L
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ + G L A +EMI KG +P TY +L L K+
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQ 346
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 182/392 (46%), Gaps = 22/392 (5%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMST 202
AFGF + G +N +++ L + + E++ EM GYV T +T
Sbjct: 37 AFGFLRSMGLK-GLEPNLITFNMIINGLCRDGRLKETSEVLVEMSR--KGYVPDEVTYNT 93
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKD 260
++ + G + A+ M + G+ + + L++++ K ++ A + F + +
Sbjct: 94 LVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRG 153
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P + + + +I+G+ + +D+A + + EM + GF P +V+Y I +C +
Sbjct: 154 LCP-NERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEA 212
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
L++M KG P V++Y+ ++ + ++++ A ++ +M LPD YSSLI
Sbjct: 213 IGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQG 272
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L + R+ +A ++F++M + P+ TY T+I++ C + AL L +M + PD
Sbjct: 273 LCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPD 332
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY---------------ASLVRG 485
TY L+ ++ R K LL +F +D A TY +LV+G
Sbjct: 333 AVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKG 392
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKML 517
G ++ A FE MI+K P + Y ++
Sbjct: 393 FCMKGLMDEADQVFESMINKNHKPNEAIYNVI 424
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 98/408 (24%), Positives = 189/408 (46%), Gaps = 22/408 (5%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGG 211
++ GY+ YNT+V+ G K+ LV + + NG ++ T ++++ + + G
Sbjct: 80 SRKGYVPDEVTYNTLVN--GYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAG 137
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIF 269
+ A+E F M G+ + R + +++ + ++ AY+V E IP S +
Sbjct: 138 NLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIP-SIVTY 196
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N LI+G C ++++A +++M +G PDVVSY+ I + R ++ + EM
Sbjct: 197 NALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIG 256
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
K P +TY+ ++ L + +++ EA ++++M + PD Y++LI K G +
Sbjct: 257 KSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNK 316
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A + ++M ++G +P+ +TYN +I+ ++ + A +LL K+ D P TY L++
Sbjct: 317 ALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIE 376
Query: 450 MCCR---------------KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
CC K M + + M + + Y ++ G G +
Sbjct: 377 NCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLK 436
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL-GNAKERINKLLAHAK 541
A ++EM+ VP+ T L + L + + G E I +L K
Sbjct: 437 AYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCK 484
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 171/394 (43%), Gaps = 22/394 (5%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-S 196
+ +L A FF + G Y T+++ + + ++ EM +G++ S
Sbjct: 136 AGNLNRAMEFFDQMHVR-GLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTR--SGFIPS 192
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T + ++ GR ++A+ + M GV D + S ++ + ++ A+++ +
Sbjct: 193 IVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKV 252
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E K +P + ++ LI G C+ R++ +A +EM PD +YT I YC+E
Sbjct: 253 EMIGKSVLP-DAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKE 311
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
D K EM +KG P +TY ++++ L K + EA ++ K+ DD +P Y
Sbjct: 312 GDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTY 371
Query: 375 SSLI-----------FILSKA----GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
++LI L K G + +A+++FE M + PN YN +I C
Sbjct: 372 NTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRI 431
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
A KL ++M P T L+K + LN ++ + ++ DA
Sbjct: 432 GNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELS 491
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
LV + G +++ + EM G++P T
Sbjct: 492 KVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 156/358 (43%), Gaps = 2/358 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNTM+D K K+ + ++ M L +L T + I+ L R GR + E M
Sbjct: 21 YNTMIDGYCKLKRTDEAFGFLRSMG-LKGLEPNLITFNMIINGLCRDGRLKETSEVLVEM 79
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
+ G D + L++ K + A + E ++ + + + LI+ CK +
Sbjct: 80 SRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNL 139
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ A + +M +G P+ +YT I + ++ + L EM G PS++TY +
Sbjct: 140 NRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNAL 199
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ ++ EA+ + + M LPD YS++I ++ + A ++ +M + V
Sbjct: 200 INGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSV 259
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+P+ +TY+++I C + A + Q+M PD TY L+ C++ +
Sbjct: 260 LPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALH 319
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L M + DA TY L+ GL + + + A ++ +P TY L E
Sbjct: 320 LHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIEN 377
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%)
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
L+ +++M+ + CLP+ Y+++I K R +A M +G+ PN++T+N +I+
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C + ++L +M PD TY L+ C++ L M +N +S
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ TY SL+ + ++G L A FF++M +G+ P TY + ++ L + R+
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRV 180
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 98/239 (41%), Gaps = 26/239 (10%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE- 257
T +T++ + G + A+ M + G D +VL++ L K + A ++ L+
Sbjct: 300 TYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKL 359
Query: 258 -FKDCIPLSSQIFNILIH---------------GWCKTRKVDDAQKAMKEMFQQGFSPDV 301
+ D IP S+ +N LI G+C +D+A + + M + P+
Sbjct: 360 FYDDSIP-SAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNE 418
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL---GKAKQINEALKV 358
Y I +CR + K KEM P +T ++ AL G ++NE +
Sbjct: 419 AIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIG- 477
Query: 359 YEKMKSDDC-LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ ++S C L D L+ I K G + + +M K G++P+ T I+
Sbjct: 478 -DILRS--CKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGTPTNAIARG 533
>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
Length = 692
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 187/384 (48%), Gaps = 5/384 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++ L ++ F + E++ +M E + + +TI+ + + G + A E M
Sbjct: 302 FNTLISYLCRNGLFERVHEVLAQMVE-HGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 360
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
YG++ + + L+ L E ++ E KDC PL FNIL+ +C+
Sbjct: 361 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC-PLDDVTFNILVDFFCQNGL 419
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD + +++M + G PDV++YT I +C+E + LK M GCKP+ I+YTI
Sbjct: 420 VDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 479
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ L A++ +A + +M C + +++LI L K G V+ A E+ + M G
Sbjct: 480 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 539
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P++++Y+T+I + + AL+LL M P+ Y+ + R+ R+ +
Sbjct: 540 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 599
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ ++ + DA Y +++ L + G+ E A F M+S G VP STY +L L
Sbjct: 600 QMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 659
Query: 522 EKKR-LGNAKERINKLLAHAKEQK 544
+ + A+E + +L + +K
Sbjct: 660 ASEGFVKEAQEMLTELCSKGALRK 683
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 171/377 (45%), Gaps = 8/377 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN MV ++ + L + N Y T ++R L GR DA+ M
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVPPNAY----TYFPVVRALCARGRIADALAVLDEM 185
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ G V+++ +G A +V L + C L N++++ C
Sbjct: 186 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCA-LDVGNCNLVLNAICDQGS 244
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD+A ++++ G PDVVSY ++ C K + V + ++EM C P+++T+
Sbjct: 245 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 304
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L + +V +M C PD Y+++I + K G ++ A+EI M G
Sbjct: 305 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 364
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PNV+ YNT++ C+ E +LL +M + C D T+ L+ C+ + +
Sbjct: 365 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 424
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL M ++ D TY +++ G + G ++ A + M + G P +Y ++ + L
Sbjct: 425 ELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 484
Query: 522 -EKKRLGNAKERINKLL 537
+R +A++ +++++
Sbjct: 485 CSAERWVDAEDLMSQMI 501
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 162/383 (42%), Gaps = 39/383 (10%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD- 260
I+ RGG + AV + G D +++++ + SV+ A + +
Sbjct: 199 VILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSF 258
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
C P +N ++ G C ++ Q+ M+EM + P++V++ I + CR F +
Sbjct: 259 GCEP-DVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 317
Query: 320 VDDTLKEMQEKGC-----------------------------------KPSVITYTIVMH 344
V + L +M E GC KP+V+ Y ++
Sbjct: 318 VHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLK 377
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
L A++ E ++ +M DC D ++ L+ + G V E+ E M + G +P
Sbjct: 378 GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMP 437
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+V+TY T+I+ C + A+ LL+ M CKP+ +Y +LK C +R L+
Sbjct: 438 DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM 497
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ M + ++ T+ +L+ L + G +E A ++M+ G P +Y + + L K
Sbjct: 498 SQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 557
Query: 525 -RLGNAKERINKLLAHAKEQKTF 546
+ A E +N ++ T
Sbjct: 558 GKTDEALELLNVMVNKGMSPNTI 580
>gi|15224753|ref|NP_179518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334184304|ref|NP_001189552.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546774|sp|Q6NKW7.2|PP164_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g19280
gi|3135258|gb|AAC16458.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251769|gb|AEC06863.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|330251770|gb|AEC06864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 693
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 181/427 (42%), Gaps = 71/427 (16%)
Query: 182 ELVKEMDE--LNNG-YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVL 238
EL +E E L+ G +++ A +S +R+ G +D E GMK YG+ D A +V
Sbjct: 253 ELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVF 312
Query: 239 MDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAM-------- 289
+D L K ++ A V + K I S + +I G+CK K ++A K +
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPN 372
Query: 290 ------------------------KEMFQQGFSPDVVSYTCFIEHYC------------- 312
+E+F+ G PD V YT I+ YC
Sbjct: 373 IFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 313 ----------------------REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
R + + M+ +G K V+TY +MH GK
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
Q+N+ ++ ++M+S PD + Y+ LI + G + +ANEI ++ ++G VP+ L +
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I R + + A L M + KPD T + LL C+ +RM+ L +
Sbjct: 553 DVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDA 612
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
+ D Y +L+ G G +E AC M+ +G++P ST+ L LE KR N++
Sbjct: 613 GLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSE 672
Query: 531 ERINKLL 537
+ LL
Sbjct: 673 THASMLL 679
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/440 (20%), Positives = 189/440 (42%), Gaps = 37/440 (8%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL----------- 171
+ + + L E+TL D + FF W++ G H+ + M+ +L
Sbjct: 113 IRILDDLFEETL-----DASIVLYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVD 167
Query: 172 ----------GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR-LVRGGRYDDAVEAF 220
G+ + CL ++K++ E L T+ +I+ +R + + A++
Sbjct: 168 MLLCLVKKCSGEERSLCL---VMKDLFETRIDRRVLETVFSILIDCCIRERKVNMALKLT 224
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILIHGWCK 278
+ ++G+ L+ +++ + +E A + F+E L++ + ++ I +C
Sbjct: 225 YKVDQFGIFPSRGVCISLLKEILRVHGLELA-REFVEHMLSRGRHLNAAVLSLFIRKYCS 283
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
D + + M G PD+V++T FI+ C+ ++ L +++ G ++
Sbjct: 284 DGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQDSVS 343
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+ V+ K + EA+K+ + P+ YSS + + G + A+ IF+++
Sbjct: 344 VSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIF 400
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ G++P+ + Y TMI C + A + + + P T L+ C R +
Sbjct: 401 ELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFGSIS 460
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML- 517
+ +M + +D TY +L+ G ++ +L +EM S GI P +TY +L
Sbjct: 461 DAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 520
Query: 518 EEKLEKKRLGNAKERINKLL 537
+ + + A E I++L+
Sbjct: 521 HSMVVRGYIDEANEIISELI 540
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 170/345 (49%), Gaps = 2/345 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+V L K ++F + E++ EM L S A +S+++ L + G+ ++A+ + +
Sbjct: 300 YCTLVYGLCKVQEFEIGLEMMDEMLCLRFS-PSEAAVSSLVEGLRKRGKIEEALNLVKRV 358
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
+GV + + L+D+L KG A +F K + + ++ILI +C+ K+
Sbjct: 359 VDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKL 418
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D A + EM G V Y I +C+ D + + EM K +P+V+TYT +
Sbjct: 419 DTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSL 478
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
M +IN+AL++Y +M P +++L+ L +AG ++DA ++F +M + V
Sbjct: 479 MGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN +TYN MI C + A + L++M E PD +Y PL+ C +
Sbjct: 539 KPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKV 598
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + K + ++ Y L+ G GKLE A S +EM+ +G+
Sbjct: 599 FVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 178/400 (44%), Gaps = 41/400 (10%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGR 212
TG P +Y T +L + L+ + VK +E+ V + T + ++ G
Sbjct: 499 TGKGIAPSIY-TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGD 557
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFN 270
A E + M + G+ DT + L+ L A KVF++ K L+ +
Sbjct: 558 MSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA-KVFVDGLHKGNCELNEICYT 616
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
L+HG+C+ K+++A +EM Q+G D+V Y I+ + KD + LKEM ++
Sbjct: 617 GLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G KP + YT ++ A K EA +++ M ++ C+P+ Y+++I L KAG V +A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 391 NEIFE--------------------------DMKK---------QGVVPNVLTYNTMISS 415
+ DM+K +G++ N TYN +I
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C + E A +L+ +M D PDC TY ++ CR+ +K L M + + D
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
Y +L+ G +G++ A EM+ +G++P + T +
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 156/337 (46%), Gaps = 3/337 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L + ++ L +G ++ +A F M K G+ + S+L+D + ++ A
Sbjct: 366 NLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFL 425
Query: 256 LEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E D + LS +N LI+G CK + A+ M EM + P VV+YT + YC +
Sbjct: 426 GEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSK 485
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
K EM KG PS+ T+T ++ L +A I +A+K++ +M + P+ Y
Sbjct: 486 GKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTY 545
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ +I + G + A E ++M ++G+VP+ +Y +I C + A + + +
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK 605
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C+ + Y LL CR+ +++ + M + V +D Y L+ G ++ +L
Sbjct: 606 GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKL 665
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
+EM +G+ P Y + + K + G+ KE
Sbjct: 666 FFGLLKEMHDRGLKPDDVIYTSMIDA--KSKTGDFKE 700
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 151/330 (45%), Gaps = 3/330 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T+S ++ LV+ + A+E F M G+ D + ++ +L + + A ++ +
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
E C ++ +N+LI G CK +KV +A K++ + PDVV+Y + C+ ++
Sbjct: 254 EATGC-DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
F + + EM PS + ++ L K +I EAL + +++ P+ Y++
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI L K + +A +F+ M K G+ PN +TY+ +I C R + + AL L +M +
Sbjct: 373 LIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG 432
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
K Y L+ C+ + + M + TY SL+ G GK+ A
Sbjct: 433 LKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKAL 492
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
+ EM KGI P T+ L L + L
Sbjct: 493 RLYHEMTGKGIAPSIYTFTTLLSGLFRAGL 522
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 82/354 (23%), Positives = 152/354 (42%), Gaps = 10/354 (2%)
Query: 171 LGKSKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG 227
L K + F L EL +M + + Y+ + ++R L A E M+ G
Sbjct: 202 LVKFRHFGLAMELFNDMVSVGIRPDVYI----YTGVIRSLCELKDLSRAKEMIAHMEATG 257
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDA 285
+ + +VL+D L K V A + L KD P + L++G CK ++ +
Sbjct: 258 CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKP-DVVTYCTLVYGLCKVQEFEIG 316
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ M EM FSP + + +E + + + +K + + G P++ Y ++ +
Sbjct: 317 LEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDS 376
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
L K ++ +EA ++++M P+ YS LI + + G++ A +M G+ +
Sbjct: 377 LCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLS 436
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
V YN++I+ C + A + +M +P TY L+ C K ++ L
Sbjct: 437 VYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
M ++ T+ +L+ GL +G + A F EM + P TY ++ E
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 129/309 (41%), Gaps = 23/309 (7%)
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKT 279
F G+ + G + T + +L+ LVK N A + S +FN+L + K
Sbjct: 93 FLGLHR-GFDHSTASFCILIHALVKANLFWPASSLLQTLLLRALKPSDVFNVLFSCYEKC 151
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL--KEMQEK-GCKPSV 336
+ + + I+HY R + R +D L K M K P V
Sbjct: 152 KLSSSSS-----------------FDLLIQHYVRSR--RVLDGVLVFKMMITKVSLLPEV 192
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
T + ++H L K + A++++ M S PD Y+ +I L + + A E+
Sbjct: 193 RTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAH 252
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M+ G N++ YN +I C + + A+ + + + KPD TY L+ C+ +
Sbjct: 253 MEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQE 312
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ ++ M S +SLV GL + GK+E A + + ++ G+ P Y
Sbjct: 313 FEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNA 372
Query: 517 LEEKLEKKR 525
L + L K R
Sbjct: 373 LIDSLCKGR 381
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 96/230 (41%), Gaps = 38/230 (16%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M G++ D + ++D K + A+ ++ + + C+P + + +I+G CK
Sbjct: 673 MHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP-NEVTYTAVINGLCKAG 731
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCF--------------------------------- 307
V++A+ +M P+ V+Y CF
Sbjct: 732 FVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYN 791
Query: 308 --IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I +CR+ + + + M G P ITYT +++ L + + +A++++ M
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
PD Y++LI AG + A E+ +M +QG++PN T T S+
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRTTTSN 901
>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
Length = 413
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 105/357 (29%), Positives = 174/357 (48%), Gaps = 6/357 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++T+V L K + + +EM L G + +T++ R G A
Sbjct: 50 FDTLVIFLCKMSRATDALAVFQEM--LGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHH 107
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M + D S LMD L K A +VF ++ C+P + ++N+LI K
Sbjct: 108 MTAHAFVLDVFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMP-DTVVYNVLISCLGKQG 166
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
KVD+A + +++M ++G PD +Y I+ + K M+ + P V+TY
Sbjct: 167 KVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYN 226
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+++ L K ++ +EA ++++M+++ C+PD + + +LI L+KAGR++DA E + K
Sbjct: 227 TLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKM 286
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G VPN YN +IS C + + +L Q M E C PD TY L+ R+ +
Sbjct: 287 GHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMA 346
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + + TY L+R L +G++E A + F+EMI+KG P TY L
Sbjct: 347 MELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 132/292 (45%), Gaps = 8/292 (2%)
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKD---CIPLSSQIFNILIHGWCKTRKVDDAQK 287
D A + L+ K + A +F K C P ++ F+ L+ CK + DA
Sbjct: 10 DVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKP-NAVSFDTLVIFLCKMSRATDALA 68
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+EM G DV I CR R+ L M V TY+ +M ALG
Sbjct: 69 VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
KA + +AL+V+ M+ C+PDT Y+ LI L K G+V +A E+ EDM ++G++P+
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188
Query: 408 TYNTMIS--SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
TYN +I S+C R E+ A M+ PD TY LL + +R L
Sbjct: 189 TYNIVIDVLSSCGRYEK--AYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFD 246
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M N D T+ +L+ L ++G++E A ++ G VP Y L
Sbjct: 247 EMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNAL 298
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 131/280 (46%), Gaps = 3/280 (1%)
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG-FSPDVVSYTCFIEHYCREKDFR 318
DC P +N LI G+CK D A + + Q+G P+ VS+ + C+
Sbjct: 6 DCAP-DVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRAT 64
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+EM G + V ++H + + +A ++ M + + D YS L+
Sbjct: 65 DALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLM 124
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L KAGR A E+F +M+K G +P+ + YN +IS + + + AL+LL+ M
Sbjct: 125 DALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIM 184
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PDC TY ++ + R + M + S D TY +L+ GL + + + AC
Sbjct: 185 PDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDL 244
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLL 537
F+EM + +P +T+ L + L K R+ +A E+ +L+
Sbjct: 245 FDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLV 284
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 125/262 (47%), Gaps = 6/262 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGR 212
+ G M +YN ++ LGK K EL+++M+ G + T + ++ L GR
Sbjct: 145 KAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNR--KGIMPDCRTYNIVIDVLSSCGR 202
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFN 270
Y+ A F MK+ D + L++ L K + A +F E + C+P F
Sbjct: 203 YEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMP-DLTTFG 261
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI K +++DA + + + G P+ Y I +CR K + ++M E
Sbjct: 262 TLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIEC 321
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
C P ITYTI++ + + A+++ ++M + P + Y+ LI LS AG+V+DA
Sbjct: 322 SCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDA 381
Query: 391 NEIFEDMKKQGVVPNVLTYNTM 412
+F++M +G P++ TY+ +
Sbjct: 382 YTLFKEMIAKGFNPDMQTYSAL 403
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 16/387 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+M+ S ++ +L++EM E + T + ++ V+ G++ +A E + M
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G+ +T S ++D K N ++ A +F + K C P + FN LI G+C ++
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKR 410
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DD + + EM + G D +Y I + D D L+EM G P ++T
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 342 VMHAL---GKAKQINEALKVYEKMKSD--------DCLPDTSFYSSLIFILSKAGRVKDA 390
++ L GK K E KV +K K D PD Y+ LI L G+ +A
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E++E+M +G+VP+ +TY++MI C +S + A ++ M P+ T+ L+
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ R+ L M + + +A TY +L+ G + G + A F+EMIS G+ P
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 511 HSTYK-MLEEKLEKKRLGNAKERINKL 536
T + ML K+ L A + KL
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 176/395 (44%), Gaps = 46/395 (11%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G T Y T+VD + K L+++M+E+++ ++ S I+ L + GR+
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
DA F M++ G+ D +N +I
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFT----------------------------------YNSMI 297
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G+C + + DA++ ++EM ++ SPDVV+Y I + +E F + ++ EM +G
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ ITY+ ++ K +++ A ++ M + C P+ +++LI A R+ D E+
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+M + G+V + TYNT+I + AL LLQ+M PD T LL C
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477
Query: 454 KKRMKVLNFLLTHMFK-----------NDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
++K + M K N V D TY L+ GLI GK A +EEM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 503 ISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKL 536
+GIVP TY M++ ++ RL A + + +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 1/271 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
F ILI +C K+ A ++ + G PDVV++ + C E + + +M
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E C+P+V+T+T +M+ L + +I EA+ + ++M D P Y +++ + K G
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 389 DANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A + M++ ++PNV+ Y+ +I S C +A L +M+E PD TY +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C R LL M + +S D TY +L+ ++ GK A ++EM+ +GI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
+P TY + + K+ +A E + L+A
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 157/338 (46%), Gaps = 3/338 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVF 255
+ T +T++ L R +A+ F M + + + LM+ L + G VE +
Sbjct: 149 VVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD 208
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG-FSPDVVSYTCFIEHYCRE 314
+D + + + ++ G CK A +++M + P+VV Y+ I+ C++
Sbjct: 209 RMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ EMQEKG P + TY ++ + + ++A ++ ++M PD Y
Sbjct: 269 GRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI K G+ +A E++++M +G++PN +TY++MI C ++ + A + M
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C P+ T+ L+ C KR+ LL M + + D TY +L+ G G L
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNA 448
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
A +EMIS G+ P T L + L + +L +A E
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 136/283 (48%), Gaps = 15/283 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRG 222
+NT++D +K+ EL+ EM E G V+ T +T++ G + A++ +
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTE--TGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------------DCIPLSSQIFN 270
M G+ D L+D L ++ A ++F + + + Q +N
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
ILI G K +A++ +EM +G PD ++Y+ I+ C++ + M K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P+V+T+T +++ KA ++++ L+++ +M + + Y +LI K G + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+IF++M GV P+ +T M++ ++ E + A+ +L+K++
Sbjct: 636 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 16/387 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+M+ S ++ +L++EM E + T + ++ V+ G++ +A E + M
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G+ +T S ++D K N ++ A +F + K C P + FN LI G+C ++
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKR 410
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DD + + EM + G D +Y I + D D L+EM G P ++T
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 342 VMHAL---GKAKQINEALKVYEKMKSD--------DCLPDTSFYSSLIFILSKAGRVKDA 390
++ L GK K E KV +K K D PD Y+ LI L G+ +A
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E++E+M +G+VP+ +TY++MI C +S + A ++ M P+ T+ L+
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ R+ L M + + +A TY +L+ G + G + A F+EMIS G+ P
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 511 HSTYK-MLEEKLEKKRLGNAKERINKL 536
T + ML K+ L A + KL
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 176/395 (44%), Gaps = 46/395 (11%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G T Y T+VD + K L+++M+E+++ ++ S I+ L + GR+
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
DA F M++ G+ D +N +I
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFT----------------------------------YNSMI 297
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G+C + + DA++ ++EM ++ SPDVV+Y I + +E F + ++ EM +G
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ ITY+ ++ K +++ A ++ M + C P+ +++LI A R+ D E+
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+M + G+V + TYNT+I + AL LLQ+M PD T LL C
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477
Query: 454 KKRMKVLNFLLTHMFK-----------NDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
++K + M K N V D TY L+ GLI GK A +EEM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 503 ISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKL 536
+GIVP TY M++ ++ RL A + + +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 133/271 (49%), Gaps = 1/271 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FNILI +C K+ A ++ + G PDVV++T + C E + + +M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFHQMF 176
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E C+P+V+T+T +M+ L + +I EA+ + ++M D P Y +++ + K G
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 389 DANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A + M++ ++PNV+ Y+ +I S C +A L +M+E PD TY +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C R LL M + +S D TY +L+ ++ GK A ++EM+ +GI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
+P TY + + K+ +A E + L+A
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 157/338 (46%), Gaps = 3/338 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVF 255
+ T +T++ L R +A+ F M + + + LM+ L + G VE +
Sbjct: 149 VVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD 208
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG-FSPDVVSYTCFIEHYCRE 314
+D + + + ++ G CK A +++M + P+VV Y+ I+ C++
Sbjct: 209 RMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ EMQEKG P + TY ++ + + ++A ++ ++M PD Y
Sbjct: 269 GRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI K G+ +A E++++M +G++PN +TY++MI C ++ + A + M
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C P+ T+ L+ C KR+ LL M + + D TY +L+ G G L
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNA 448
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
A +EMIS G+ P T L + L + +L +A E
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 136/283 (48%), Gaps = 15/283 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRG 222
+NT++D +K+ EL+ EM E G V+ T +T++ G + A++ +
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTE--TGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------------DCIPLSSQIFN 270
M G+ D L+D L ++ A ++F + + + Q +N
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
ILI G K +A++ +EM +G PD ++Y+ I+ C++ + M K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P+V+T+T +++ KA ++++ L+++ +M + + Y +LI K G + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+IF++M GV P+ +T M++ ++ E + A+ +L+K++
Sbjct: 636 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 16/387 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+M+ S ++ +L++EM E + T + ++ V+ G++ +A E + M
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G+ +T S ++D K N ++ A +F + K C P + FN LI G+C ++
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKR 410
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DD + + EM + G D +Y I + D D L+EM G P ++T
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 342 VMHAL---GKAKQINEALKVYEKMKSD--------DCLPDTSFYSSLIFILSKAGRVKDA 390
++ L GK K E KV +K K D PD Y+ LI L G+ +A
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E++E+M +G+VP+ +TY++MI C +S + A ++ M P+ T+ L+
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ R+ L M + + +A TY +L+ G + G + A F+EMIS G+ P
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 511 HSTYK-MLEEKLEKKRLGNAKERINKL 536
T + ML K+ L A + KL
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 177/395 (44%), Gaps = 46/395 (11%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G T Y T+VD + K +L+++M+E+++ ++ S I+ L + GR+
Sbjct: 212 EDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRH 271
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
DA F M++ G+ D +N +I
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFT----------------------------------YNSMI 297
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G+C + + DA++ ++EM ++ SPDVV+Y I + +E F + ++ EM +G
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ ITY+ ++ K +++ A ++ M + C P+ +++LI A R+ D E+
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+M + G+V + TYNT+I + AL LLQ+M PD T LL C
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477
Query: 454 KKRMKVLNFLLTHMFK-----------NDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
++K + M K N V D TY L+ GLI GK A +EEM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 503 ISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKL 536
+GIVP TY M++ ++ RL A + + +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 132/271 (48%), Gaps = 1/271 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
F ILI +C K+ A ++ + G PDVV++ + C E + + +M
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E C+P+V+T+T +M+ L + +I EA+ + ++M D P Y +++ + K G
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIGDTV 236
Query: 389 DANEIFEDMKK-QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A ++ M++ ++PNV+ Y+ +I S C +A L +M+E PD TY +
Sbjct: 237 SALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C R LL M + +S D TY +L+ ++ GK A ++EM+ +GI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
+P TY + + K+ +A E + L+A
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 157/338 (46%), Gaps = 3/338 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVF 255
+ T +T++ L R +A+ F M + + + LM+ L + G VE +
Sbjct: 149 VVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD 208
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQ-QGFSPDVVSYTCFIEHYCRE 314
+D + + + ++ G CK A +++M + P+VV Y+ I+ C++
Sbjct: 209 RMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKD 268
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ EMQEKG P + TY ++ + + ++A ++ ++M PD Y
Sbjct: 269 GRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI K G+ +A E++++M +G++PN +TY++MI C ++ + A + M
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C P+ T+ L+ C KR+ LL M + + D TY +L+ G G L
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNA 448
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
A +EMIS G+ P T L + L + +L +A E
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 136/283 (48%), Gaps = 15/283 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRG 222
+NT++D +K+ EL+ EM E G V+ T +T++ G + A++ +
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTE--TGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------------DCIPLSSQIFN 270
M G+ D L+D L ++ A ++F + + + Q +N
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
ILI G K +A++ +EM +G PD ++Y+ I+ C++ + M K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P+V+T+T +++ KA ++++ L+++ +M + + Y +LI K G + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+IF++M GV P+ +T M++ ++ E + A+ +L+K++
Sbjct: 636 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 16/387 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+M+ S ++ +L++EM E + T + ++ V+ G++ +A E + M
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G+ +T S ++D K N ++ A +F + K C P + FN LI G+C ++
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKR 410
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DD + + EM + G D +Y I + D D L+EM G P ++T
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 342 VMHAL---GKAKQINEALKVYEKMKSD--------DCLPDTSFYSSLIFILSKAGRVKDA 390
++ L GK K E KV +K K D PD Y+ LI L G+ +A
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E++E+M +G+VP+ +TY++MI C +S + A ++ M P+ T+ L+
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ R+ L M + + +A TY +L+ G + G + A F+EMIS G+ P
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 511 HSTYK-MLEEKLEKKRLGNAKERINKL 536
T + ML K+ L A + KL
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 176/395 (44%), Gaps = 46/395 (11%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G T Y T+VD + K L+++M+E+++ ++ S I+ L + GR+
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
DA F M++ G+ D +N +I
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFT----------------------------------YNSMI 297
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G+C + + DA++ ++EM ++ SPDVV+Y I + +E F + ++ EM +G
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ ITY+ ++ K +++ A ++ M + C P+ +++LI A R+ D E+
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+M + G+V + TYNT+I + AL LLQ+M PD T LL C
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477
Query: 454 KKRMKVLNFLLTHMFK-----------NDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
++K + M K N V D TY L+ GLI GK A +EEM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 503 ISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKL 536
+GIVP TY M++ ++ RL A + + +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 1/271 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FNILI +C K+ A ++ + G PDVV++T + C E + D +M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E C+P+V+T+T +M+ L + +I EA+ + ++M D P Y +++ + K G
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 389 DANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A + M++ ++PNV+ Y+ +I S C +A L +M+E PD TY +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C R LL M + +S D TY +L+ ++ GK A ++EM+ +GI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
+P TY + + K+ +A E + L+A
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 158/338 (46%), Gaps = 3/338 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVF 255
+ T +T++ L R +A++ F M + + + LM+ L + G VE +
Sbjct: 149 VVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD 208
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG-FSPDVVSYTCFIEHYCRE 314
+D + + + ++ G CK A +++M + P+VV Y+ I+ C++
Sbjct: 209 RMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ EMQEKG P + TY ++ + + ++A ++ ++M PD Y
Sbjct: 269 GRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI K G+ +A E++++M +G++PN +TY++MI C ++ + A + M
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C P+ T+ L+ C KR+ LL M + + D TY +L+ G G L
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNA 448
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
A +EMIS G+ P T L + L + +L +A E
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 136/283 (48%), Gaps = 15/283 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRG 222
+NT++D +K+ EL+ EM E G V+ T +T++ G + A++ +
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTE--TGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------------DCIPLSSQIFN 270
M G+ D L+D L ++ A ++F + + + Q +N
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
ILI G K +A++ +EM +G PD ++Y+ I+ C++ + M K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P+V+T+T +++ KA ++++ L+++ +M + + Y +LI K G + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+IF++M GV P+ +T M++ ++ E + A+ +L+K++
Sbjct: 636 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|46518477|gb|AAS99720.1| At2g19280 [Arabidopsis thaliana]
gi|62319953|dbj|BAD94048.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|110738808|dbj|BAF01327.1| putative salt-inducible protein [Arabidopsis thaliana]
Length = 693
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 111/427 (25%), Positives = 181/427 (42%), Gaps = 71/427 (16%)
Query: 182 ELVKEMDE--LNNG-YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVL 238
EL +E E L+ G +++ A +S +R+ G +D E GMK YG+ D A +V
Sbjct: 253 ELAREFVEHMLSRGRHLNAAVLSLFIRKYCSDGYFDKGWELLMGMKHYGIRPDIVAFTVF 312
Query: 239 MDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAM-------- 289
+D L K ++ A V + K I S + +I G+CK K ++A K +
Sbjct: 313 IDKLCKAGFLKEATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIKLIHSFRLRPN 372
Query: 290 ------------------------KEMFQQGFSPDVVSYTCFIEHYC------------- 312
+E+F+ G PD V YT I+ YC
Sbjct: 373 IFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFG 432
Query: 313 ----------------------REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
R + + M+ +G K V+TY +MH GK
Sbjct: 433 ALLKSGNPPSLTTSTILIGACSRFGSISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTH 492
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
Q+N+ ++ ++M+S PD + Y+ LI + G + +ANEI ++ ++G VP+ L +
Sbjct: 493 QLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYIDEANEIISELIRRGFVPSTLAFT 552
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I R + + A L M + KPD T + LL C+ +RM+ L +
Sbjct: 553 DVIGGFSKRGDFQEAFILWFYMADLRMKPDVVTCSALLHGYCKAQRMEKAIVLFNKLLDA 612
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
+ D Y +L+ G G +E AC M+ +G++P ST+ L LE KR N++
Sbjct: 613 GLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVLGLEGKRFVNSE 672
Query: 531 ERINKLL 537
+ LL
Sbjct: 673 THASMLL 679
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/443 (19%), Positives = 186/443 (41%), Gaps = 43/443 (9%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL----------- 171
+ + + L E+TL D + FF W++ G H+ + M+ +L
Sbjct: 113 IRILDDLFEETL-----DASIVLYFFRWSELWIGVEHSSRSISRMIHILVSGNMNYRAVD 167
Query: 172 ----------GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRL----VRGGRYDDAV 217
G+ + CL+ M +L + + T+ L +R + + A+
Sbjct: 168 MLLCLVKKCSGEERSLCLV------MKDLFKTRIDRRVLETVFSILIDCCIRERKVNMAL 221
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILIHG 275
+ + ++G+ L+ +++ + +E A + F+E L++ + ++ I
Sbjct: 222 KLTYKVDQFGIFPSRGVCISLLKEILRVHGLELA-REFVEHMLSRGRHLNAAVLSLFIRK 280
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+C D + + M G PD+V++T FI+ C+ ++ L +++ G
Sbjct: 281 YCSDGYFDKGWELLMGMKHYGIRPDIVAFTVFIDKLCKAGFLKEATSVLFKLKLFGISQD 340
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
++ + V+ K + EA+K+ + P+ YSS + + G + A+ IF+
Sbjct: 341 SVSVSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQ 397
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
++ + G++P+ + Y TMI C + A + + + P T L+ C R
Sbjct: 398 EIFELGLLPDCVCYTTMIDGYCNLGRTDKAFQYFGALLKSGNPPSLTTSTILIGACSRFG 457
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ + +M + +D TY +L+ G ++ +L +EM S GI P +TY
Sbjct: 458 SISDAESVFRNMKTEGLKLDVVTYNNLMHGYGKTHQLNKVFELIDEMRSAGISPDVATYN 517
Query: 516 ML-EEKLEKKRLGNAKERINKLL 537
+L + + + A E I++L+
Sbjct: 518 ILIHSMVVRGYIDEANEIISELI 540
>gi|297839351|ref|XP_002887557.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333398|gb|EFH63816.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 845
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 110/409 (26%), Positives = 192/409 (46%), Gaps = 14/409 (3%)
Query: 55 FDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSE-----NHETDVDKISKILSKQYQ 109
++ S D+ +I S+ G+ + R E R++ N V+ +S IL ++++
Sbjct: 242 YNVHSSDDRTIISSVEGFGKPSR--EMMRVTPGTAPTPRQYCNPGYVVENVSGIL-RRFK 298
Query: 110 SPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVD 169
EAL G + Q L++ N A GFF W K Q G+ H Y TMV
Sbjct: 299 WGHAAEEALHNFGFRMDAYQANQVLKQMDN-YANALGFFYWLKRQPGFKHDGHTYTTMVG 357
Query: 170 VLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
LG++K+F + L+ EM + + + T + ++ R ++A+ F+ M++ G E
Sbjct: 358 NLGRAKQFGAINRLLDEMVK-DGCKPNTVTYNRLIHSYGRANYLNEAMNVFKQMQEAGCE 416
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NILIHGWCKTRKVDDAQK 287
D L+D K ++ A ++ + LS F +++I+ K + A +
Sbjct: 417 PDRVTYCTLIDIHAKAGFLDIAMDMYQRMQ-AAGLSPDTFTYSVIINCLGKAGHLPAAHR 475
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
EM QG +P++V++ I + + +++ ++MQ G +P +TY+IVM LG
Sbjct: 476 LFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVLG 535
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
+ EA V+ +M+ + +PD Y L+ + KAG V+ A + +++M G+ PNV
Sbjct: 536 HCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVEKAWQWYQEMLHAGLRPNVP 595
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
T N+++S+ A LLQ M P +TY LL CC R
Sbjct: 596 TCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS-CCTDAR 643
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 164/350 (46%), Gaps = 11/350 (3%)
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT-RALSVLMDTLVKGNSVE 249
N GYV + +S I+RR G ++A+ F G D +A VL N++
Sbjct: 282 NPGYV-VENVSGILRRFKWGHAAEEALHNF------GFRMDAYQANQVLKQMDNYANALG 334
Query: 250 HAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
Y +L+ + + ++ + ++ + + EM + G P+ V+Y I
Sbjct: 335 FFY--WLKRQPGFKHDGHTYTTMVGNLGRAKQFGAINRLLDEMVKDGCKPNTVTYNRLIH 392
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
Y R + + K+MQE GC+P +TY ++ KA ++ A+ +Y++M++ P
Sbjct: 393 SYGRANYLNEAMNVFKQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQAAGLSP 452
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
DT YS +I L KAG + A+ +F +M QG PN++T+N MI+ E ALKL
Sbjct: 453 DTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLY 512
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ M+ +PD TY+ ++++ ++ + M + + D Y LV ++
Sbjct: 513 RDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKA 572
Query: 490 GKLELACSFFEEMISKGIVPYHST-YKMLEEKLEKKRLGNAKERINKLLA 538
G +E A +++EM+ G+ P T +L L R+ A + +LA
Sbjct: 573 GNVEKAWQWYQEMLHAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLA 622
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 94/366 (25%), Positives = 166/366 (45%), Gaps = 38/366 (10%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + I+ + + RY + R M +G+ + L+VL+++ N V A+ V
Sbjct: 73 SIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVL 132
Query: 256 LEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ C P ++ F LI G C ++ +A +M +GF PDVV Y I C+
Sbjct: 133 AKILKLGCQPDTAS-FTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
L+ M++ C+P V+ Y ++H+L K +Q +A ++ +M + P+
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251
Query: 374 YSSLIFILS-----------------------------------KAGRVKDANEIFEDMK 398
+SL++ L K G V A+++ + M
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ GV P+V+TY +I C RSE + A+K+ M C P+ +Y L+ C+ +RM
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
+L M + + + TY +L+ GL G+L+ A + F EM++ G +P TY++L
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILL 431
Query: 519 EKLEKK 524
+ L K
Sbjct: 432 DYLCKN 437
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 172/387 (44%), Gaps = 3/387 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ +Y T+++ L K+ L++ M++ N + T++ L + +
Sbjct: 174 GFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEK-GNCQPDVVVYGTLIHSLCKDRQQTQ 232
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIH 274
A F M G+ + + L+ L +H + E D + + I ++
Sbjct: 233 AFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVD 292
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
CK V A + MFQ G PDVV+YT I+ +C + + M KGC P
Sbjct: 293 ALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAP 352
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V +Y +++ K +++++A+ ++E+M +P+T Y++LI L GR++DA +F
Sbjct: 353 NVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALF 412
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+M G +P+++TY ++ C + A+ LL+ +E PD + Y ++ CR
Sbjct: 413 REMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRA 472
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ L +++ + + TY + GL + G L+ A F EM TY
Sbjct: 473 GELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTY 532
Query: 515 KMLEEK-LEKKRLGNAKERINKLLAHA 540
+ + L A + + ++LA
Sbjct: 533 NTITQGFLRNNETSRAIQLLEEMLARG 559
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 158/350 (45%), Gaps = 5/350 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
+++T++ L + G A + M + GVE D + L+D + ++ A KVF +
Sbjct: 286 SLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMM 345
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K C P + +N LI+G+CK ++D A +EM +Q P+ V+Y I C
Sbjct: 346 VHKGCAP-NVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGR 404
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ +EM G P ++TY I++ L K +++A+ + + ++ + PD Y+
Sbjct: 405 LQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTI 464
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I + +AG ++DA ++F ++ +G+ PNV TYN M C R + A KL +M+E+
Sbjct: 465 VIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA 524
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C D TY + + R LL M S D T LV L + G +
Sbjct: 525 CSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEA 584
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
E+M + T E+ + LG +N L +E F
Sbjct: 585 HKLEDMFPHLRIQVKDTVFCKEDDINA--LGKVISDLNDWLEELEEDMIF 632
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 112/247 (45%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P S + N + +DDA + M P +V + + + K + V
Sbjct: 36 PFLSLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLS 95
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
++M G +V T +++++ ++N A V K+ C PDT+ +++LI L
Sbjct: 96 LSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLC 155
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
G++ +A +F+ M +G P+V+ Y T+I+ C A++LL+ ME+ C+PD
Sbjct: 156 LEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVV 215
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y L+ C+ ++ L + M +S + T SLV L G+ + + EM
Sbjct: 216 VYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEM 275
Query: 503 ISKGIVP 509
+ I+P
Sbjct: 276 VDSKIMP 282
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 71/174 (40%)
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+++AL + +M P ++ ++ ++K R + M G+ NV T N
Sbjct: 55 LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I+S C + A +L K+ + C+PD ++ L+K C + ++ L M
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG 174
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
D YA+L+ GL ++G A M P Y L L K R
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDR 228
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 181/363 (49%), Gaps = 8/363 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ + ++++EM E + T T++ + GR D+AV+ F M
Sbjct: 75 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 134
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-----CIPLSSQIFNILIHGWCK 278
G + + +V+ + L+ G + L ++D + ++ +N+L+H
Sbjct: 135 LTKG---EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 191
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ +A + ++EM +G +PDV +Y I +C+E + +K + + M +G + +V+T
Sbjct: 192 DGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 251
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT +++AL K Q+ E K++++ PD Y++LI S +G + A EI +M+
Sbjct: 252 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 311
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
K+ + P+ +TYNT++ C + A KL+ +M + +PD TY L+ K +K
Sbjct: 312 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 371
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
+ M + TY +L++GL ++G+ + A + +EM+ GI P STY L
Sbjct: 372 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 431
Query: 519 EKL 521
E L
Sbjct: 432 EGL 434
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 179/375 (47%), Gaps = 8/375 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N M+ L + K EL+++M N T +T++ GR A++ R M
Sbjct: 44 FNIMLRHLCSAGKPARALELLRQMPRPN-----AVTYNTVIAGFCSRGRVQAALDIMREM 98
Query: 224 K-KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
+ + G+ + ++ K V+ A KVF E K + + ++N LI G+C
Sbjct: 99 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 158
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+D A M ++G + V +Y + + + + ++EM KG P V TY
Sbjct: 159 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ K + +AL+++E M Y+SLI+ LSK G+V++ +++F++ ++
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+++ YN +I+S + A +++ +ME+ PD TY L++ C R+
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L+ M K + D TY +L+ G G ++ A EM++KG P TY L +
Sbjct: 339 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 398
Query: 521 LEKKRLGNAKERINK 535
L K G+ E + K
Sbjct: 399 LCKNGQGDDAENMVK 413
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 132/270 (48%), Gaps = 7/270 (2%)
Query: 251 AYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
A+ +F + F+ +PL + FNI++ C K A + +++M + P+ V+Y I
Sbjct: 25 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIA 80
Query: 310 HYCREKDFRKVDDTLKEMQEK-GCKPSVITYTIVMHALGKAKQINEALKVYEKMKS-DDC 367
+C + D ++EM+E+ G P+ TY V+ K +++EA+KV+++M + +
Sbjct: 81 GFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 140
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P+ Y++LI G++ A + M ++GV V TYN ++ + A +
Sbjct: 141 KPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYE 200
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L+++M PD TY L+ C++ +K + +M + V TY SL+ L
Sbjct: 201 LVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALS 260
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ G+++ F+E + +GI P Y L
Sbjct: 261 KKGQVQETDKLFDEAVRRGIRPDLVLYNAL 290
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 128/281 (45%), Gaps = 18/281 (6%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG--- 210
+ G T YN +V L + +ELV+EM G LA L+ G
Sbjct: 172 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM-----GGKGLAPDVFTYNILINGHCK 226
Query: 211 -GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQI 268
G A+E F M + GV + L+ L K V+ K+F E + I +
Sbjct: 227 EGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 286
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC---REKDFRKVDDTLK 325
+N LI+ + +D A + M EM ++ +PD V+Y + C R + RK+ D
Sbjct: 287 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID--- 343
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM ++G +P ++TY ++ + +AL++ +M + P Y++LI L K G
Sbjct: 344 EMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 403
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+ DA + ++M + G+ P+ TY ++I +E+E A+
Sbjct: 404 QGDDAENMVKEMVENGITPDDSTYISLIEGLT--TEDERAI 442
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YN +++ S +E++ EM++ + T +T+MR L GR D+A +
Sbjct: 286 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV-TYNTLMRGLCLLGRVDEARKLIDE 344
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-----------FNI 271
M K G++ D LV N++ Y + + KD + + +++ +N
Sbjct: 345 MTKRGIQPD----------LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 394
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
LI G CK + DDA+ +KEM + G +PD +Y IE E D R +DD
Sbjct: 395 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE-DERAIDD 444
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/387 (27%), Positives = 181/387 (46%), Gaps = 16/387 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+M+ S ++ +L++EM E + T + ++ V+ G++ +A E + M
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEAEELYDEM 351
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G+ +T S ++D K N ++ A +F + K C P + FN LI G+C ++
Sbjct: 352 LPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSP-NLITFNTLIDGYCGAKR 410
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DD + + EM + G D +Y I + D D L+EM G P ++T
Sbjct: 411 IDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDT 470
Query: 342 VMHAL---GKAKQINEALKVYEKMKSD--------DCLPDTSFYSSLIFILSKAGRVKDA 390
++ L GK K E KV +K K D PD Y+ LI L G+ +A
Sbjct: 471 LLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEA 530
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E++E+M +G+VP+ +TY++MI C +S + A ++ M P+ T+ L+
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLING 590
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ R+ L M + + +A TY +L+ G + G + A F+EMIS G+ P
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 511 HSTYK-MLEEKLEKKRLGNAKERINKL 536
T + ML K+ L A + KL
Sbjct: 651 TITIRNMLTGLWSKEELKRAVAMLEKL 677
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 176/395 (44%), Gaps = 46/395 (11%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G T Y T+VD + K L+++M+E+++ ++ S I+ L + GR+
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
DA F M++ G+ D +N +I
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFT----------------------------------YNSMI 297
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G+C + + DA++ ++EM ++ SPDVV+Y I + +E F + ++ EM +G
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGII 357
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ ITY+ ++ K +++ A ++ M + C P+ +++LI A R+ D E+
Sbjct: 358 PNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMEL 417
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+M + G+V + TYNT+I + AL LLQ+M PD T LL C
Sbjct: 418 LHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCD 477
Query: 454 KKRMKVLNFLLTHMFK-----------NDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
++K + M K N V D TY L+ GLI GK A +EEM
Sbjct: 478 NGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 537
Query: 503 ISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKL 536
+GIVP TY M++ ++ RL A + + +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSM 572
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 131/271 (48%), Gaps = 1/271 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
F ILI +C K+ A ++ + G PDVV++ + C E + + +M
Sbjct: 117 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFHQMF 176
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E C+P+V+T+T +M+ L + +I EA+ + ++M D P Y +++ + K G
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 389 DANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A + M++ ++PNV+ Y+ +I S C +A L +M+E PD TY +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C R LL M + +S D TY +L+ ++ GK A ++EM+ +GI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 356
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
+P TY + + K+ +A E + L+A
Sbjct: 357 IPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 157/338 (46%), Gaps = 3/338 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVF 255
+ T +T++ L R +A+ F M + + + LM+ L + G VE +
Sbjct: 149 VVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD 208
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG-FSPDVVSYTCFIEHYCRE 314
+D + + + ++ G CK A +++M + P+VV Y+ I+ C++
Sbjct: 209 RMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ EMQEKG P + TY ++ + + ++A ++ ++M PD Y
Sbjct: 269 GRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI K G+ +A E++++M +G++PN +TY++MI C ++ + A + M
Sbjct: 329 NALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMAT 388
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C P+ T+ L+ C KR+ LL M + + D TY +L+ G G L
Sbjct: 389 KGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNA 448
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
A +EMIS G+ P T L + L + +L +A E
Sbjct: 449 ALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALE 486
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 136/283 (48%), Gaps = 15/283 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRG 222
+NT++D +K+ EL+ EM E G V+ T +T++ G + A++ +
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTE--TGLVADTTTYNTLIHGFYLVGDLNAALDLLQE 455
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------------DCIPLSSQIFN 270
M G+ D L+D L ++ A ++F + + + Q +N
Sbjct: 456 MISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYN 515
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
ILI G K +A++ +EM +G PD ++Y+ I+ C++ + M K
Sbjct: 516 ILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSK 575
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P+V+T+T +++ KA ++++ L+++ +M + + Y +LI K G + A
Sbjct: 576 SFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGA 635
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+IF++M GV P+ +T M++ ++ E + A+ +L+K++
Sbjct: 636 LDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|449466215|ref|XP_004150822.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 487
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 117/435 (26%), Positives = 210/435 (48%), Gaps = 16/435 (3%)
Query: 110 SPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT---QTGYMHTPEMYNT 166
S ++V AL G++ S LV++ LR N + A FF WA+ Q+ Y +N
Sbjct: 53 SRNEVDGALLATGLAPSPELVQEVLRVSYNSPSSAIKFFRWARQLAKQSAYS-----WNL 107
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
M+D+LGK++ F MW ++ M + +SL T ++ GR +A F M +Y
Sbjct: 108 MIDLLGKNELFEEMWNGIRTMRQ--EKILSLPTFVSVFGSYCSAGRSKEARMTFEVMDRY 165
Query: 227 GVEKDTRALSVLMDTLV-KGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDA 285
VEKD A++ L+ + + N A++ F + K+ IPL + F IL+ GW K V+ A
Sbjct: 166 EVEKDVVAVNSLLSAICSEENQTSEAWEFFEKHKEKIPLDGESFAILLEGWEKEGNVEKA 225
Query: 286 QKAMKEMFQQ-GFSP-DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+ EM ++ G++P +V SY F+ R L ++++ C P + + +
Sbjct: 226 KVTFDEMVKRVGWNPENVSSYDAFLITLVRGGRSEDAIKVLLKLKKNRCLPGLKFLSNAL 285
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+L + N A+ +++ + +P+ Y+++I +LS+ ++ D+ + + M G
Sbjct: 286 DSLIQQNDANHAILLWDIVVGSGLVPNLIVYNAIIGLLSENSKIDDSFRLLDSMVFHGAF 345
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
PN LTYN + SS + + + ++M ++ C P + A + M + +
Sbjct: 346 PNSLTYNLIFSSLIKNKKVKEVSQFFREMVKNECPPTPSSCAAAITMLFDGYDPETAIDI 405
Query: 464 LTHMFKNDVS-MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
+M +N + MD A L+ GL +L F ++MI + I ST K+L+
Sbjct: 406 WNYMDENHIEPMDTSANALLI-GLCNLNRLTEVRRFADDMIDQRIDILESTMKLLKNCFY 464
Query: 523 KKRLGNAKERINKLL 537
++R GN +E + LL
Sbjct: 465 QQR-GNFRENYDGLL 478
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 163/329 (49%), Gaps = 1/329 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
A +T++ G A F M++ G+ D + +++ L + +E A K+ E
Sbjct: 362 ALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQE 421
Query: 258 -FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ + + + +LI G+CK K+ +A + M Q+G +P+VV+YT + C++ D
Sbjct: 422 MWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGD 481
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ ++ L EM KG + + TY +++ L KA + +A++ M + PD Y++
Sbjct: 482 VQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTT 541
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI L K+G + A+ + ++M +G+ P ++TYN +++ C E KLL M E
Sbjct: 542 LIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKN 601
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
P+ TY L+K C + MK + M DV + TY L++G ++ ++ A
Sbjct: 602 IHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEAL 661
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
F +EMI KG ++Y L L KK+
Sbjct: 662 YFHDEMIQKGFRLTATSYSALIRLLNKKK 690
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 143/308 (46%), Gaps = 1/308 (0%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIF 269
G ++AV+ M GVE + + ++ L + A +V + + + L ++
Sbjct: 305 GELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALY 364
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
++ G+C + A++ EM ++G + D V+YT I CR + + + L+EM
Sbjct: 365 TTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWA 424
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+ +TYT+++ K ++ EA +++ M P+ Y++L L K G V+
Sbjct: 425 RRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQA 484
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
ANE+ +M +G+ N TYN++I+ C E A++ + M+ KPD TY L+
Sbjct: 485 ANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLID 544
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ + + LL M + TY L+ G SG++E + M+ K I P
Sbjct: 545 ALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHP 604
Query: 510 YHSTYKML 517
+TY L
Sbjct: 605 NAATYNSL 612
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 182/406 (44%), Gaps = 19/406 (4%)
Query: 113 KVVEALKGCGVSVSNSLVEQTLRRFSN--DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
+VVE + V + +L L F N DL A +F + + G Y TM++
Sbjct: 347 RVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQ-RKGLATDGVTYTTMING 405
Query: 171 LGKS-------KKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
L ++ K MW ++DE+ T + ++ + G+ +A + M
Sbjct: 406 LCRAVELEEAEKLLQEMWARRLDVDEV--------TYTVLIDGYCKRGKMAEAFQMHNAM 457
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKV 282
+ GV + + L D L K V+ A ++ E + + L++ +N LI+G CK +
Sbjct: 458 VQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYL 517
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ A + M +M PDV +YT I+ C+ D + L+EM +KG KP+++TY ++
Sbjct: 518 EQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVL 577
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
M+ + ++ K+ + M + P+ + Y+SL+ +K EI++ M+ + V
Sbjct: 578 MNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDV 637
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN TYN +I C + AL +M + + +Y+ L+++ +KK+
Sbjct: 638 GPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARE 697
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
L M K ++ ++ Y + LE + +E++ IV
Sbjct: 698 LFHDMRKEGLTAESDVYDFYIDLNFNEDNLESTLALCDELVEASIV 743
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/304 (27%), Positives = 142/304 (46%), Gaps = 10/304 (3%)
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKT 279
R +++YG+ A + ++ L ++ A ++F E S +NIL+ C
Sbjct: 220 LRRLRQYGISPSPEACNAVLSRL----PLDEAIELFQELPHKNVCS---YNILLKALCDA 272
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+V DA++ EM +PDVV+Y I +C + L EM G +P+ Y
Sbjct: 273 GRVKDARQLFDEMAS---APDVVTYGILIHGHCALGELENAVKLLDEMVAGGVEPNATVY 329
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T V+ L I++AL+V E M + D + Y++++ G + A F++M++
Sbjct: 330 TSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQR 389
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+ + +TY TMI+ C E E A KLLQ+M D TY L+ C++ +M
Sbjct: 390 KGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAE 449
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ M + V+ + TY +L GL + G ++ A EM +KG+ TY L
Sbjct: 450 AFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLIN 509
Query: 520 KLEK 523
L K
Sbjct: 510 GLCK 513
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 113/234 (48%), Gaps = 3/234 (1%)
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
E+FQ+ +V SY ++ C D +V D + E P V+TY I++H
Sbjct: 249 ELFQELPHKNVCSYNILLKALC---DAGRVKDARQLFDEMASAPDVVTYGILIHGHCALG 305
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++ A+K+ ++M + P+ + Y+S++ +L G + DA + EDM ++ V+ + Y
Sbjct: 306 ELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYT 365
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
T++S C + + +A + +M+ D TY ++ CR ++ LL M+
Sbjct: 366 TVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWAR 425
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ +D TY L+ G + GK+ A M+ +G+ P TY L + L K+
Sbjct: 426 RLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQ 479
>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
gi|224033903|gb|ACN36027.1| unknown [Zea mays]
Length = 655
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 188/384 (48%), Gaps = 5/384 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++ L ++ F + E++ +M E + + +TI+ + + G + A E M
Sbjct: 265 FNTLISYLCRNGLFERVHEVLAQMVE-HGCTPDIRMYATIIDGICKEGHLEVAHEILNRM 323
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
YG++ + + L+ L E ++ E KDC PL FNIL+ +C+
Sbjct: 324 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC-PLDDVTFNILVDFFCQNGL 382
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD + +++M ++G PDV++YT I +C+E + LK M GCKP+ I+YTI
Sbjct: 383 VDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ L A++ +A + +M C + +++LI L K G V+ A E+ + M G
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P++++Y+T+I + + AL+LL M P+ Y+ + R+ R+ +
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 562
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ ++ + DA Y +++ L + G+ E A F M+S G VP STY +L L
Sbjct: 563 QMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622
Query: 522 EKKR-LGNAKERINKLLAHAKEQK 544
+ + A+E + +L + +K
Sbjct: 623 ASEGFVKEAQEMLTELCSKGALRK 646
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 170/380 (44%), Gaps = 8/380 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN MV ++ + L + N Y T ++R L GR DA+ M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPVPPNAY----TYFPVVRALCARGRIADALAVLDEM 148
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ G V+++ +G A +V L + C L N++++ C
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGC-ALDVGNCNLVLNAICDQGS 207
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD+A ++++ G PDVVSY ++ C K + V + ++EM C P+++T+
Sbjct: 208 VDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L + +V +M C PD Y+++I + K G ++ A+EI M G
Sbjct: 268 LISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYG 327
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PNV+ YNT++ C+ E +LL +M + C D T+ L+ C+ + +
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 387
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL M + D TY +++ G + G ++ A + M + G P +Y ++ + L
Sbjct: 388 ELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 447
Query: 522 -EKKRLGNAKERINKLLAHA 540
+R +A++ +++++
Sbjct: 448 CSAERWVDAEDLMSQMIQQG 467
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 163/383 (42%), Gaps = 39/383 (10%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD- 260
I+ RGG + AV + G D +++++ + SV+ A + +
Sbjct: 162 VILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSF 221
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
C P +N ++ G C ++ Q+ M+EM + P++V++ I + CR F +
Sbjct: 222 GCEP-DVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 280
Query: 320 VDDTLKEMQEKGC-----------------------------------KPSVITYTIVMH 344
V + L +M E GC KP+V+ Y ++
Sbjct: 281 VHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLK 340
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
L A++ E ++ +M DC D ++ L+ + G V E+ E M ++G +P
Sbjct: 341 GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMP 400
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+V+TY T+I+ C + A+ LL+ M CKP+ +Y +LK C +R L+
Sbjct: 401 DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM 460
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ M + ++ T+ +L+ L + G +E A ++M+ G P +Y + + L K
Sbjct: 461 SQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 520
Query: 525 -RLGNAKERINKLLAHAKEQKTF 546
+ A E +N ++ T
Sbjct: 521 GKTDEALELLNVMVNKGMSPNTI 543
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 168/330 (50%), Gaps = 1/330 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T+ +++ R R DAV M + G + D A + ++D+L K V A+ F E
Sbjct: 156 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215
Query: 258 F-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ I + + L++G C + + DA + + +M ++ +P+V++Y+ ++ + +
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + +EM P ++TY+ +++ L +I+EA ++++ M S CL D Y++
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI KA RV+D ++F +M ++G+V N +TYNT+I + + A + +M+
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY LL C ++ + M K ++ +D TY +++RG+ ++GK+E A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
S F + KG+ P TY + L K L
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 166/330 (50%), Gaps = 11/330 (3%)
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+ S+ + ++ +V+ +YD + + M+ G+ D +++++ V A
Sbjct: 82 FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 254 VFLEF------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
+ + D + + S L++G+C+ +V DA + +M + G+ PD+V+Y
Sbjct: 142 ILGKMLKLGYEPDRVTIGS-----LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 196
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I+ C+ K D KE++ KG +P+V+TYT +++ L + + ++A ++ M
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P+ YS+L+ K G+V +A E+FE+M + + P+++TY+++I+ C + A +
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+ M C D +Y L+ C+ KR++ L M + + + TY +L++G
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKML 517
++G ++ A FF +M GI P TY +L
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 184/419 (43%), Gaps = 40/419 (9%)
Query: 100 ISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMH 159
+ K+L Y+ PD+V SLV RR N ++ A + GY
Sbjct: 143 LGKMLKLGYE-PDRVTIG----------SLVNGFCRR--NRVSDAVSLVD-KMVEIGYKP 188
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
YN ++D L K+K+ ++ KE+ E ++ T + ++ L R+ DA
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCK 278
M K + + S L+D VK V A ++F E + I ++ LI+G C
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKPS 335
++D+A + M +G DVVSY I +C+ K +V+D +K EM ++G +
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK---RVEDGMKLFREMSQRGLVSN 364
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+TY ++ +A +++A + + +M PD Y+ L+ L G ++ A IFE
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
DM+K+ + +++TY T+I C + E A L + KPD TY ++ C K
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 456 RMKVLNFLLTHM-----FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ + L T M KND ++ G + L+ ++M+S G P
Sbjct: 485 LLHEVEALYTKMKQEGLMKNDCTL-------------SDGDITLSAELIKKMLSCGYAP 530
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 4/248 (1%)
Query: 278 KTR----KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
KTR K++DA +M + P +V + + + K + V K+M+ G +
Sbjct: 58 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+ T+ IV++ Q++ AL + KM PD SL+ + RV DA +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+ M + G P+++ YN +I S C +A +++E +P+ TY L+ C
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
R LL+ M K ++ + TY++L+ +++GK+ A FEEM+ I P T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 514 YKMLEEKL 521
Y L L
Sbjct: 298 YSSLINGL 305
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 3/222 (1%)
Query: 313 REKDFRKVD--DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
R +D + D D +M + PS++ + ++ A+ K K+ + + + +KM+ D
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
++ +I +V A I M K G P+ +T ++++ C R+ +A+ L+
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
KM E KPD Y ++ C+ KR+ + + + + TY +LV GL S
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 491 KLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKE 531
+ A +MI K I P TY +L+ ++ ++ AKE
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 171/356 (48%), Gaps = 4/356 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +++ L KF + LV EM + G VS+ + ++ L + G +A E F
Sbjct: 223 YGSLIRGLCGVGKFLEGFGLVDEM--IRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDE 280
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
M G E + + LM +V+ A ++F + +N+ IHG+CK +
Sbjct: 281 MVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGR 340
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V DA + EM ++G P++V+Y I+ C+ + + +K M G P ++T I
Sbjct: 341 VRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCI 400
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K+K++++A+ ++ ++ PD Y+ LI + R+ +A + DM +
Sbjct: 401 LLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKN 460
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+VP+++TY+ +I C NA +LL +M PD TY+ LL +K+ +
Sbjct: 461 LVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAV 520
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
FL M K + D Y ++ G +S +++ A + F EM K +VP TY +L
Sbjct: 521 FLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTIL 576
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 156/326 (47%), Gaps = 1/326 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FK 259
S ++ L R G D+ E + M GV + L+ L + + E +
Sbjct: 189 SIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIR 248
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ +S +F +LI G CK + +A++ EM +G+ P++V+ T + YC + +
Sbjct: 249 RGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDM 308
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ + E G K V TY + +H K ++ +A++V+++M + +P+ Y+SLI
Sbjct: 309 ARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLID 368
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L KAG V A EI + M + G+ P+++T ++ C + A+ L ++ E P
Sbjct: 369 CLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTP 428
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D +Y L+ CC +RM LL M ++ TY+ L+ GL SG++ A
Sbjct: 429 DVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLL 488
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKKR 525
EM KG +P TY +L + L KK+
Sbjct: 489 NEMHVKGPLPDTITYSILLDALWKKQ 514
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 158/330 (47%), Gaps = 4/330 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFR 221
++ ++D L K+ E+ EM +N GY ++ T + +M G D A E F
Sbjct: 257 VFTVLIDGLCKNGMLVEAREMFDEM--VNRGYEPNIVTCTALMGGYCLKGNVDMARELFD 314
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTR 280
+ ++G ++D +V + K V A +VF E ++ + + +N LI CK
Sbjct: 315 AIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAG 374
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+V A + +K M + G +PD+V+ ++ C+ K + ++ E G P V +YT
Sbjct: 375 EVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYT 434
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I++H ++++ EA+ + M + +P YS LI L ++GR+ +A + +M +
Sbjct: 435 ILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVK 494
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G +P+ +TY+ ++ + + + A+ L +M + +PD Y ++ C+ +R+
Sbjct: 495 GPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEA 554
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
L M ++ D TY L + +SG
Sbjct: 555 INLFREMHMKNLVPDIVTYTILFNAVFKSG 584
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 8/268 (2%)
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
L + N ++ G C V A + E+ GFS + VSY I C + +
Sbjct: 105 LDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNL 164
Query: 324 LKEMQEKG--------CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
L+ ++++ K +V+ Y+IV+ L + ++E + Y +M + P+ Y
Sbjct: 165 LRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYG 224
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
SLI L G+ + + ++M ++G+ +V + +I C A ++ +M
Sbjct: 225 SLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNR 284
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
+P+ T L+ C K + + L + + D TY + G + G++ A
Sbjct: 285 GYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDA 344
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEK 523
F+EM +G+VP TY L + L K
Sbjct: 345 VRVFDEMCREGVVPNIVTYNSLIDCLCK 372
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 75/182 (41%), Gaps = 9/182 (4%)
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
DT ++++ L G V A E +++ G N ++Y +I+ C A+ LL
Sbjct: 106 DTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLL 165
Query: 430 QKM--------EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
+ + + K + Y+ ++ CR + M N V + TY S
Sbjct: 166 RMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGS 225
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHA 540
L+RGL GK +EMI +G+ + +L + L K L A+E ++++
Sbjct: 226 LIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRG 285
Query: 541 KE 542
E
Sbjct: 286 YE 287
>gi|225430658|ref|XP_002268375.1| PREDICTED: pentatricopeptide repeat-containing protein At5g18390,
mitochondrial [Vitis vinifera]
gi|296085168|emb|CBI28663.3| unnamed protein product [Vitis vinifera]
Length = 454
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 185/426 (43%), Gaps = 42/426 (9%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V IS I+ + + + L +SV++ LV + LR N T + FF WA++
Sbjct: 50 VHHISAIVRRDFY----LERTLNKLPISVTSDLVYRVLRSCPNSGTESLRFFNWARSHLS 105
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
Y T Y ++ L ++K+F MW++ +M L S +S+I+ + G D A
Sbjct: 106 YQPTTLEYEELLKTLARTKQFQPMWKIAHQMQTL-----SPTVVSSIIEEFGKHGLVDQA 160
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
VE F +A S L +C P + +++N L+
Sbjct: 161 VEVF-----------NKAKSAL---------------------NC-PQTIEVYNSLLFAL 187
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
C+ + A ++ M ++G +P+ +Y+ + +C ++ D L+EM KG P V
Sbjct: 188 CEVKYFHGAYALIRRMIRKGVTPNKQTYSVLVNGWCAAGKMKEAQDFLEEMSRKGFNPPV 247
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+++ L A + A ++ KM + C PD +S++ + KAG + +I+ D
Sbjct: 248 RGRDLLVDGLLNAGYLEAAKEMVRKMTKEGCAPDVETLNSMLEAICKAGEAEFCIDIYND 307
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
+ + GV PNV TY MI +AC + A ++L + ED +P YAP++K CR +
Sbjct: 308 VCRLGVSPNVGTYKIMIPAACKEGRIDEAFRILHRSIEDGHRPFPSLYAPIIKALCRNGQ 367
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ M + Y L+ G+ A ++ EM + P + M
Sbjct: 368 FDDAFCFFSDMKVKGHPPNRPVYTMLITMCGRGGRFVDAANYLVEMTELNLTPISRCFDM 427
Query: 517 LEEKLE 522
+ + L+
Sbjct: 428 VTDGLK 433
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 184/372 (49%), Gaps = 8/372 (2%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM--DELNNGY-VSLATMSTI 203
F + ++ + +T + T++ LGK M +L ++M LN+G SL T +T+
Sbjct: 153 FLSEINSKYDFGYTLCSFTTLLIQLGKFD----MVDLARDMYIKMLNSGIRPSLLTFNTM 208
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCI 262
+ L + GR +A + +Y + + L+ + ++++ A+ +F KD
Sbjct: 209 INILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGC 268
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+S ++ LI+G C ++++A ++EM Q+G P V +YT + C + +
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L +M+++GC P++ T+T ++ L + + A+ +Y KM +D +P T Y++LI L
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLC 388
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
GR + A IF+ M G +P+ TYN +I C + + A+ + KM + P+
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ C++ + LL M N + DA TY L+ G GKLE A S F M
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 503 ISKGIVPYHSTY 514
+ GI P H TY
Sbjct: 509 MEHGISPNHVTY 520
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 169/363 (46%), Gaps = 12/363 (3%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
+ + ++ L + KF + L +M L +G V + T + ++ +L GR++ A F
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKM--LADGLVPTTVTYNALINQLCVEGRFETAFTIF 400
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKT 279
+ M +G T+ + ++ ++ A +F + + I +N LI+G+CK
Sbjct: 401 KWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQ 460
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+++A + ++ M G PD +YT I + R M E G P+ +TY
Sbjct: 461 GNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTY 520
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ ++++AL ++ KM LP + Y+ +I SK + +A M K
Sbjct: 521 TAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVK 580
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR--- 456
QG++PNV+TY + I C A K+ +ME+ P+ TY+ L+ C++ R
Sbjct: 581 QGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAED 640
Query: 457 MKVLNFL--LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ N L LTH + + ++D TY +LV+GL G+ A M KG+ P Y
Sbjct: 641 AEMYNLLARLTH-YGCEPNVD--TYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697
Query: 515 KML 517
+ L
Sbjct: 698 RAL 700
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 183/422 (43%), Gaps = 52/422 (12%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM---------------- 187
AF F W + G + + + YN ++ K FCLM ++ K M
Sbjct: 396 AFTIFKWMLSH-GSLPSTQTYNEII------KCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 188 --DELNNGYVSLATMSTIMRRL----------------------VRGGRYDDAVEAFRGM 223
+ L GY ++ MR L RGG+ + A F GM
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL-SSQIFNILIHGWCKTRKV 282
++G+ + + ++D V+ A +F + + L SSQ +N++I G+ KT +
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A+ +M +QG P+V++YT FI+ CR EM+++ P++ TY+ +
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 343 MHAL---GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ L G+A+ E + ++ C P+ Y++L+ L GR +A+++ M+K
Sbjct: 629 IYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+ P+ Y ++ C + E+AL + M+ + Y L+ C++ ++
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEE 747
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ M + + D + L+ GL++ G+ +L M S+ TY ML
Sbjct: 748 AQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAR 807
Query: 520 KL 521
+L
Sbjct: 808 EL 809
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 159/355 (44%), Gaps = 2/355 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+T+++ L + ++++EM + ++ T + + L G +AVE M
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQ-KGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
KK G + + + L+ L + E A ++ + D + ++ +N LI+ C +
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ A K M G P +Y I+ +C D +K +M + G P+VITY +
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K +N A+++ E MK + PD Y+ LI S+ G+++ A +F M + G+
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN +TY +I ++ ++AL L KM E P +TY ++ + +
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M K + + TY S + GL +G+ LA F EM + P TY L
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 173/369 (46%), Gaps = 12/369 (3%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYD 214
G + T YN +++ L +F + + K M L++G + S T + I++ G
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWM--LSHGSLPSTQTYNEIIKCFCLMGDIQ 429
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILI 273
A+ F M K G + + L+ K ++ +A ++ K + + + + LI
Sbjct: 430 KAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELI 489
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEK 330
G+ + K++ A M + G SP+ V+YT I+ Y + KVDD L +M E
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF---NLAKVDDALALFWKMVES 546
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G PS TY +++ K I+EA KM LP+ Y+S I L + GR A
Sbjct: 547 GNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLA 606
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSAC--ARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+IF +M+K+ PN+ TY+++I C R+E+ LL ++ C+P+ +TY L+
Sbjct: 607 FKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
K C + R + L+ M K + Y +L+ G ++ K+E A + F M + G
Sbjct: 667 KGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQ 726
Query: 509 PYHSTYKML 517
+ S YK L
Sbjct: 727 LHLSDYKAL 735
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 115/237 (48%), Gaps = 12/237 (5%)
Query: 317 FRKVD---DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
F VD D +M G +PS++T+ +++ L K ++ EA + + D P+
Sbjct: 180 FDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFT 239
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+SLI + + A +F+ M K G PN +TY+T+I+ C+ E A+ +L++M
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299
Query: 434 EDLCKPDCETYA-PLLKMC---CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ +P TY PL+ +C C + ++ LL M K + T+ +L+ GL
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVE----LLGKMKKRGCVPNIQTFTALISGLSRD 355
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAKEQKT 545
GK E+A + +M++ G+VP TY L +L + R A +L+H T
Sbjct: 356 GKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPST 412
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/372 (28%), Positives = 184/372 (49%), Gaps = 8/372 (2%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM--DELNNGY-VSLATMSTI 203
F + ++ + +T + T++ LGK M +L ++M LN+G SL T +T+
Sbjct: 153 FLSEINSKYDFGYTLCSFTTLLIQLGKFD----MVDLARDMYIKMLNSGIRPSLLTFNTM 208
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCI 262
+ L + GR +A + +Y + + L+ + ++++ A+ +F KD
Sbjct: 209 INILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGC 268
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+S ++ LI+G C ++++A ++EM Q+G P V +YT + C + +
Sbjct: 269 DPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAVE 328
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L +M+++GC P++ T+T ++ L + + A+ +Y KM +D +P T Y++LI L
Sbjct: 329 LLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLC 388
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
GR + A IF+ M G +P+ TYN +I C + + A+ + KM + P+
Sbjct: 389 VEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ C++ + LL M N + DA TY L+ G GKLE A S F M
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 503 ISKGIVPYHSTY 514
+ GI P H TY
Sbjct: 509 MEHGISPNHVTY 520
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 169/363 (46%), Gaps = 12/363 (3%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
+ + ++ L + KF + L +M L +G V + T + ++ +L GR++ A F
Sbjct: 343 QTFTALISGLSRDGKFEIAIGLYHKM--LADGLVPTTVTYNALINQLCVEGRFETAFTIF 400
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKT 279
+ M +G T+ + ++ ++ A +F + + I +N LI+G+CK
Sbjct: 401 KWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQ 460
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+++A + ++ M G PD +YT I + R M E G P+ +TY
Sbjct: 461 GNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTY 520
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ ++++AL ++ KM LP + Y+ +I SK + +A M K
Sbjct: 521 TAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVK 580
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR--- 456
QG++PNV+TY + I C A K+ +ME+ P+ TY+ L+ C++ R
Sbjct: 581 QGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAED 640
Query: 457 MKVLNFL--LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ N L LTH + + ++D TY +LV+GL G+ A M KG+ P Y
Sbjct: 641 AEMYNLLARLTH-YGCEPNVD--TYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697
Query: 515 KML 517
+ L
Sbjct: 698 RAL 700
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 97/422 (22%), Positives = 183/422 (43%), Gaps = 52/422 (12%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM---------------- 187
AF F W + G + + + YN ++ K FCLM ++ K M
Sbjct: 396 AFTIFKWMLSH-GSLPSTQTYNEII------KCFCLMGDIQKAMVIFDKMLKAGSSPNVI 448
Query: 188 --DELNNGYVSLATMSTIMRRL----------------------VRGGRYDDAVEAFRGM 223
+ L GY ++ MR L RGG+ + A F GM
Sbjct: 449 TYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGM 508
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL-SSQIFNILIHGWCKTRKV 282
++G+ + + ++D V+ A +F + + L SSQ +N++I G+ KT +
Sbjct: 509 MEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSI 568
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A+ +M +QG P+V++YT FI+ CR EM+++ P++ TY+ +
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Query: 343 MHAL---GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ L G+A+ E + ++ C P+ Y++L+ L GR +A+++ M+K
Sbjct: 629 IYGLCQEGRAEDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQK 687
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+ P+ Y ++ C + E+AL + M+ + Y L+ C++ ++
Sbjct: 688 KGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEE 747
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ M + + D + L+ GL++ G+ +L M S+ TY ML
Sbjct: 748 AQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAR 807
Query: 520 KL 521
+L
Sbjct: 808 EL 809
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/355 (25%), Positives = 159/355 (44%), Gaps = 2/355 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+T+++ L + ++++EM + ++ T + + L G +AVE M
Sbjct: 275 YSTLINGLCSEGRLEEAMDMLEEMVQ-KGIEPTVYTYTIPLVSLCDAGCSSEAVELLGKM 333
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
KK G + + + L+ L + E A ++ + D + ++ +N LI+ C +
Sbjct: 334 KKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRF 393
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ A K M G P +Y I+ +C D +K +M + G P+VITY +
Sbjct: 394 ETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTL 453
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K +N A+++ E MK + PD Y+ LI S+ G+++ A +F M + G+
Sbjct: 454 IYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGI 513
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN +TY +I ++ ++AL L KM E P +TY ++ + +
Sbjct: 514 SPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAEN 573
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M K + + TY S + GL +G+ LA F EM + P TY L
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSL 628
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 102/369 (27%), Positives = 173/369 (46%), Gaps = 12/369 (3%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYD 214
G + T YN +++ L +F + + K M L++G + S T + I++ G
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWM--LSHGSLPSTQTYNEIIKCFCLMGDIQ 429
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILI 273
A+ F M K G + + L+ K ++ +A ++ K + + + + LI
Sbjct: 430 KAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELI 489
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEK 330
G+ + K++ A M + G SP+ V+YT I+ Y + KVDD L +M E
Sbjct: 490 SGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYF---NLAKVDDALALFWKMVES 546
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G PS TY +++ K I+EA KM LP+ Y+S I L + GR A
Sbjct: 547 GNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLA 606
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSAC--ARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+IF +M+K+ PN+ TY+++I C R+E+ LL ++ C+P+ +TY L+
Sbjct: 607 FKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLV 666
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
K C + R + L+ M K + Y +L+ G ++ K+E A + F M + G
Sbjct: 667 KGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQ 726
Query: 509 PYHSTYKML 517
+ S YK L
Sbjct: 727 LHLSDYKAL 735
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 115/237 (48%), Gaps = 12/237 (5%)
Query: 317 FRKVD---DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
F VD D +M G +PS++T+ +++ L K ++ EA + + D P+
Sbjct: 180 FDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFT 239
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+SLI + + A +F+ M K G PN +TY+T+I+ C+ E A+ +L++M
Sbjct: 240 YTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMV 299
Query: 434 EDLCKPDCETYA-PLLKMC---CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ +P TY PL+ +C C + ++ LL M K + T+ +L+ GL
Sbjct: 300 QKGIEPTVYTYTIPLVSLCDAGCSSEAVE----LLGKMKKRGCVPNIQTFTALISGLSRD 355
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAKEQKT 545
GK E+A + +M++ G+VP TY L +L + R A +L+H T
Sbjct: 356 GKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPST 412
>gi|326510087|dbj|BAJ87260.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520816|dbj|BAJ92771.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 148/286 (51%), Gaps = 4/286 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ ++D +GKS + M ++ +EM N GY S T +TI+ LV+ D+A+ +
Sbjct: 804 YHLILDAMGKSMRIEDMLKIQEEMH--NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQ 861
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
+ G L+D L+K ++E A +F E +C + I+NIL++G+
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGD 921
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ + + M +QG +PD+ SYT I+ C + K++ + G +P +ITY +
Sbjct: 922 TEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNL 981
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H LGK+ ++ EAL +Y M+ P+ Y+SLI L KAG+ +A +++E++ +G
Sbjct: 982 LIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKG 1041
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
PNV TYN +I ENA +M C+P+ TY L
Sbjct: 1042 WKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 176/401 (43%), Gaps = 9/401 (2%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWEL 183
S +SL+E L+R D T F +G + + ++ L K K+ EL
Sbjct: 697 SSVHSLMEGILKR---DGTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHEL 753
Query: 184 VKEMDELNNGYVSLATMS--TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
VK+ + L VSL T S ++ LV D A E F MK+ G + D +++D
Sbjct: 754 VKKFENLG---VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDA 810
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
+ K +E K+ E + S+ + +N +I G K++ +D+A ++ +GFSP
Sbjct: 811 MGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPT 870
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+Y ++ ++ + + EM E GC+P+ Y I+++ A + +++E
Sbjct: 871 PCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFE 930
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
M PD Y+ +I L GR+ D F+ + G+ P+++TYN +I
Sbjct: 931 SMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGKSG 990
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
E AL L ME+ P+ TY L+ + + + + + TY
Sbjct: 991 RLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKGWKPNVFTYN 1050
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+L+RG SG E A + + MI G P STY L ++
Sbjct: 1051 ALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPNQM 1091
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 160/369 (43%), Gaps = 43/369 (11%)
Query: 172 GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
G S+ +W +K D N+ VS + + L + GR D+A++ F MK+ G+
Sbjct: 325 GDSRSVSEIWNALKA-DGYNDNVVSY---TAAVDALCQVGRVDEALDVFDEMKQKGIIPQ 380
Query: 232 TRALSVLMDTLVKGNSVEHAYKVF------------------------------------ 255
+ + L+ +K + A ++F
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYE 440
Query: 256 -LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
++ K +P N +++G KT ++ A++ E+ G SPD ++YT I+ +
Sbjct: 441 LMKSKGIVP-DVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKA 499
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + EM E C P V+ ++ L KA + NEA K++ ++K + P Y
Sbjct: 500 SNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTY 559
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++L+ L + G+VK+ ++ E M PN++TYNT++ C E AL +L M
Sbjct: 560 NTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTM 619
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+ C PD +Y ++ ++ R+ ++ M K ++ D T +++ + SG ++
Sbjct: 620 NGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKE 678
Query: 495 ACSFFEEMI 503
A E I
Sbjct: 679 ALHTVREYI 687
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 150/346 (43%), Gaps = 38/346 (10%)
Query: 204 MRRLVRG-GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC- 261
M L+R GR D + F M++ ++ + + + + A K+
Sbjct: 107 MLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAG 166
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
I L++ +N LI+ K+ +A K M G P V +Y+ + + + +D V
Sbjct: 167 IVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVV 226
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L EM+ +G +P+V +YTI + LG+A ++ EA ++ KM+ + C PD + LI IL
Sbjct: 227 GLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQIL 286
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
AGR+ DA ++F MK P+ +TY T++ C S + ++
Sbjct: 287 CDAGRLADAKDVFWKMKASDQKPDRVTYITLLDK-CGDSGDSRSVS-------------- 331
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
++ N L + ++V +Y + V L + G+++ A F+E
Sbjct: 332 ----------------EIWNALKADGYNDNVV----SYTAAVDALCQVGRVDEALDVFDE 371
Query: 502 MISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
M KGI+P +Y ++ L+ R A E N + H +
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGY 417
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 196/464 (42%), Gaps = 83/464 (17%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEM---------YNTMVDVLGKSKKFCLM 180
V T+R +S L AFG A+T G + E Y + VLG++ +
Sbjct: 202 VVPTVRTYSV-LMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEA 260
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK---------------- 224
+ ++++M+E + T + +++ L GR DA + F MK
Sbjct: 261 YRILRKMEE-EGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLD 319
Query: 225 KYGVEKDTRALSVL-------------------MDTLVKGNSVEHAYKVFLEFKDCIPLS 265
K G D+R++S + +D L + V+ A VF E K +
Sbjct: 320 KCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP 379
Query: 266 SQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
Q +N LI G+ K + + A + M G +P+ ++ FI ++ + + K
Sbjct: 380 QQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRY 439
Query: 325 KEMQEKGCKPSV-----------------------------------ITYTIVMHALGKA 349
+ M+ KG P V ITYT+++ KA
Sbjct: 440 ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKA 499
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+EA+K++ +M + C PD +SLI +L KAGR +A +IF ++K+ + P TY
Sbjct: 500 SNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTY 559
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
NT+++ + + ++LL+ M + P+ TY +L C+ + +L M
Sbjct: 560 NTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTM 619
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
N D +Y +++ GL++ +L+ A F +M K + P ++T
Sbjct: 620 NGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQM-KKVLAPDYAT 662
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 95/394 (24%), Positives = 170/394 (43%), Gaps = 40/394 (10%)
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-----------VSLA 198
++ T G M YNT +M+ LVKE D L+ + A
Sbjct: 615 YSMTMNGCMPDLSSYNT------------VMYGLVKE-DRLDEAFWMFCQMKKVLAPDYA 661
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR----ALSVLMDTLVKGNSVEHAYKV 254
T+ TI+ VR G +A+ R +Y ++ D++ ++ LM+ ++K + E +
Sbjct: 662 TVCTILPSFVRSGLMKEALHTVR---EYILQPDSKVDRSSVHSLMEGILKRDGTEKS--- 715
Query: 255 FLEFKDCIPLSSQIFNIL-----IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+EF + I S + + L I CK ++ A + +K+ G S SY I
Sbjct: 716 -IEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYNALIC 774
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
E ++ EM+ GC P TY +++ A+GK+ +I + LK+ E+M +
Sbjct: 775 GLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKS 834
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
Y+++I L K+ + +A ++ + +G P TY ++ E+A L
Sbjct: 835 TYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALF 894
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M E C+P+C Y LL + + L M + ++ D +Y ++ L
Sbjct: 895 DEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCAD 954
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
G+L S+F+++ G+ P TY +L L K
Sbjct: 955 GRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGK 988
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 146/342 (42%), Gaps = 7/342 (2%)
Query: 196 SLATMSTIMRRLVRGGRYD-DAVEAFRG-MKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
++ T S +M L G R D + V G M+ GV + + ++ + L + +E AY+
Sbjct: 205 TVRTYSVLM--LAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYR 262
Query: 254 VF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
+ +E + C P +LI C ++ DA+ +M PD V+Y ++
Sbjct: 263 ILRKMEEEGCKP-DVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKC 321
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
D R V + ++ G +V++YT + AL + +++EAL V+++MK +P
Sbjct: 322 GDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQ 381
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y+SLI KA R A E+F M G PN T+ I+ E ALK +
Sbjct: 382 YSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYEL 441
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M+ PD +L + R+ + + + +S D TY +++ ++
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASN 501
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ A F EMI P L + L K GN +I
Sbjct: 502 ADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKI 543
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 169/382 (44%), Gaps = 12/382 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++D L K+ + +++ M +N L++ +T+M LV+ R D+A F M
Sbjct: 594 YNTVLDCLCKNGEVNYALDMLYSM-TMNGCMPDLSSYNTVMYGLVKEDRLDEAFWMFCQM 652
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQIFNILIHGWCKTR 280
KK + D + ++ + V+ ++ A E+ D S + + L+ G K
Sbjct: 653 KKV-LAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHS-LMEGILKRD 710
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ + + + + G D + + I H C+ K+ + +K+ + G +Y
Sbjct: 711 GTEKSIEFAENIASSGLLLDDLFLSPIIRHLCKHKEALAAHELVKKFENLGVSLKTGSYN 770
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L I+ A +++ +MK C PD Y ++ + K+ R++D +I E+M +
Sbjct: 771 ALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMHNK 830
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G +TYNT+IS + A+ L ++ + P TY PLL + ++
Sbjct: 831 GYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIEDA 890
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L M + + Y L+ G +G E C FE M+ +G+ P +Y ++ +
Sbjct: 891 EALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVIDT 950
Query: 521 LEKKRLGNAKERINKLLAHAKE 542
L A R+N L++ K+
Sbjct: 951 L------CADGRLNDGLSYFKQ 966
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 168/330 (50%), Gaps = 1/330 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T+ +++ R R DAV M + G + D A + ++D+L K V A+ F E
Sbjct: 156 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKE 215
Query: 258 F-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ I + + L++G C + + DA + + +M ++ +P+V++Y+ ++ + +
Sbjct: 216 IERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGK 275
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + +EM P ++TY+ +++ L +I+EA ++++ M S CL D Y++
Sbjct: 276 VLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNT 335
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI KA RV+D ++F +M ++G+V N +TYNT+I + + A + +M+
Sbjct: 336 LINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFG 395
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY LL C ++ + M K ++ +D TY +++RG+ ++GK+E A
Sbjct: 396 ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAW 455
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
S F + KG+ P TY + L K L
Sbjct: 456 SLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 166/330 (50%), Gaps = 11/330 (3%)
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+ S+ + ++ +V+ +YD + + M+ G+ D +++++ V A
Sbjct: 82 FPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 254 VFLEF------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
+ + D + + S L++G+C+ +V DA + +M + G+ PD+V+Y
Sbjct: 142 ILGKMLKLGYEPDRVTIGS-----LVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAI 196
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I+ C+ K D KE++ KG +P+V+TYT +++ L + + ++A ++ M
Sbjct: 197 IDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKI 256
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P+ YS+L+ K G+V +A E+FE+M + + P+++TY+++++ C + A +
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQ 316
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+ M C D +Y L+ C+ KR++ L M + + + TY +L++G
Sbjct: 317 MFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFF 376
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKML 517
++G ++ A FF +M GI P TY +L
Sbjct: 377 QAGDVDKAQEFFSQMDFFGISPDIWTYNIL 406
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 184/419 (43%), Gaps = 40/419 (9%)
Query: 100 ISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMH 159
+ K+L Y+ PD+V SLV RR N ++ A + GY
Sbjct: 143 LGKMLKLGYE-PDRVTIG----------SLVNGFCRR--NRVSDAVSLVD-KMVEIGYKP 188
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
YN ++D L K+K+ ++ KE+ E ++ T + ++ L R+ DA
Sbjct: 189 DIVAYNAIIDSLCKTKRVNDAFDFFKEI-ERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCK 278
M K + + S L+D VK V A ++F E + I ++ L++G C
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCL 307
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKPS 335
++D+A + M +G DVVSY I +C+ K +V+D +K EM ++G +
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAK---RVEDGMKLFREMSQRGLVSN 364
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+TY ++ +A +++A + + +M PD Y+ L+ L G ++ A IFE
Sbjct: 365 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 424
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
DM+K+ + +++TY T+I C + E A L + KPD TY ++ C K
Sbjct: 425 DMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKG 484
Query: 456 RMKVLNFLLTHM-----FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ + L T M KND ++ G + L+ ++M+S G P
Sbjct: 485 LLHEVEALYTKMKQEGLMKNDCTL-------------SDGDITLSAELIKKMLSCGYAP 530
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 4/248 (1%)
Query: 278 KTR----KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
KTR K++DA +M + P +V + + + K + V K+M+ G +
Sbjct: 58 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+ T+ IV++ Q++ AL + KM PD SL+ + RV DA +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+ M + G P+++ YN +I S C +A +++E +P+ TY L+ C
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
R LL+ M K ++ + TY++L+ +++GK+ A FEEM+ I P T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297
Query: 514 YKMLEEKL 521
Y L L
Sbjct: 298 YSSLVNGL 305
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 3/222 (1%)
Query: 313 REKDFRKVD--DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
R +D + D D +M + PS++ + ++ A+ K K+ + + + +KM+ D
Sbjct: 60 RLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRND 119
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
++ +I +V A I M K G P+ +T ++++ C R+ +A+ L+
Sbjct: 120 LYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVD 179
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
KM E KPD Y ++ C+ KR+ + + + + TY +LV GL S
Sbjct: 180 KMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSS 239
Query: 491 KLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKE 531
+ A +MI K I P TY +L+ ++ ++ AKE
Sbjct: 240 RWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKE 281
>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
Length = 802
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 179/361 (49%), Gaps = 22/361 (6%)
Query: 176 KFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRA 234
KF + ++++K M + G+V +T S ++ L + + A F+ MK GV D
Sbjct: 268 KFDMAFQIIKVM--MGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYT 325
Query: 235 LSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEM 292
++L+D+ K +E A F E + I S+ + + L+H + K +++ A M
Sbjct: 326 YTILIDSFCKAGLIEQARSWFDEMRS-IGCSANVVTYTALLHAYLKAKQLPQASDIFNRM 384
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKV-----------DDTLKEMQEKG-----CKPSV 336
G P+ ++Y+ ++ C+ + +K D+ + +G P+V
Sbjct: 385 IDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNV 444
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+TY ++ L KA ++ +A ++ + M S+ C P+ Y +LI K G++ +A E+F
Sbjct: 445 VTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLR 504
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M K G +P V TY ++I + + A+K+L +M E C P+ TY ++ CR
Sbjct: 505 MSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGE 564
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ LL+ M + S + TY +L+ GL +SGK++L+ F +M +KG P + TY++
Sbjct: 565 CQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRV 624
Query: 517 L 517
L
Sbjct: 625 L 625
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 158/354 (44%), Gaps = 20/354 (5%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + ++ ++ + A + F M G +T S L+D L K ++ A +V+
Sbjct: 357 NVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVY 416
Query: 256 LEF-----------------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
+ D I + + LI G CK KV DAQ+ + M G
Sbjct: 417 TKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCE 476
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P+ + Y I+ +C+ + M + G P+V TYT ++ A+ K ++++ A+KV
Sbjct: 477 PNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKV 536
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+M C P+ Y+++I L + G + A ++ M+++G PNV+TY +I
Sbjct: 537 LSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGK 596
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ + +L+L +M C P+ TY L+ CC + + LL+ M +
Sbjct: 597 SGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQG 656
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKE 531
Y S+V+G S K + EE+ S G VP Y +L + K RL A E
Sbjct: 657 YCSVVQGF--SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALE 708
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 181/379 (47%), Gaps = 21/379 (5%)
Query: 164 YNTMVDVL---GKSKKFCLMW-ELVKEMDELNNGYV-----------SLATMSTIMRRLV 208
Y+ +VD L G+ +K C ++ +L+ D + + + ++ T ++ L
Sbjct: 396 YSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLC 455
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS-Q 267
+ + DA E M G E + L+D K +++A +VFL C L +
Sbjct: 456 KAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVH 515
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+ LI K R++D A K + +M + +P+VV+YT I+ CR + +K L M
Sbjct: 516 TYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMM 575
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+EKGC P+V+TYT ++ LGK+ +++ +L+++ +M + C P+ Y LI AG +
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLL 635
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+A+ + +MK+ + Y +++ + +L LL+++E P Y L
Sbjct: 636 DEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIA--SLGLLEELESHGTVPIAPVYGLL 693
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT---YASLVRGLIESGKLELACSFFEEMIS 504
+ + R++ L M + S++ + Y SL++ L + +LE A + E+
Sbjct: 694 IDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFELYSEITR 753
Query: 505 KGIVPYHSTYKMLEEKLEK 523
KG+VP S + L + L K
Sbjct: 754 KGVVPELSVFVCLIKGLIK 772
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 103/448 (22%), Positives = 197/448 (43%), Gaps = 67/448 (14%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
GY + YN +V VL + + + + + KEM E +G+ + T+ + L + GR+
Sbjct: 35 GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSE--SGFCMDKFTVGCFAQALCKEGRWS 92
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
DA+ +++ + DT + ++ L++ + + A + CIP + + L
Sbjct: 93 DALVM---IEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIP-NVVTYRTL 148
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+ G+ K +++ ++ + M ++G +P+ + + YC +D+ LK M + GC
Sbjct: 149 LTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADCGC 208
Query: 333 KPSVITYTIVMHALGKAKQINE------ALKVYEKMKSDDC------------------- 367
P + Y I + ++ +++ A KVYE+M + C
Sbjct: 209 PPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGK 268
Query: 368 ----------------LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+PDTS YS +I L +A +V+ A +F++MK GV P+V TY
Sbjct: 269 FDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTI 328
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I S C E A +M C + TY LL + K++ + + M
Sbjct: 329 LIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAG 388
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMI----------------SKGIVPYHSTYK 515
+ TY++LV GL ++G+++ AC + ++I + I P TY
Sbjct: 389 CPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYG 448
Query: 516 MLEEKLEKK-RLGNAKERINKLLAHAKE 542
L + L K ++ +A+E ++ +L++ E
Sbjct: 449 ALIDGLCKAHKVVDAQELLDAMLSNGCE 476
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 117/265 (44%), Gaps = 16/265 (6%)
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
C K D A + +K M +GF PD +Y+ I C K +EM+ G P V
Sbjct: 264 CGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDV 323
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TYTI++ + KA I +A +++M+S C + Y++L+ KA ++ A++IF
Sbjct: 324 YTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNR 383
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM----------------EEDLCKPD 440
M G PN +TY+ ++ C E + A ++ K+ D P+
Sbjct: 384 MIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPN 443
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ C+ ++ LL M N + Y +L+ G + GK++ A F
Sbjct: 444 VVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFL 503
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKR 525
M G +P TY L + + K R
Sbjct: 504 RMSKCGYLPTVHTYTSLIDAMFKDR 528
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 140/281 (49%), Gaps = 9/281 (3%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
++ GY+ T Y +++D + K ++ L +++ +M E ++ ++ T + ++ L R G
Sbjct: 506 SKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVE-SSCTPNVVTYTAMIDGLCRIGE 564
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFN 270
A++ M++ G + + L+D L K V+ + ++F++ K C P + +
Sbjct: 565 CQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAP-NYVTYR 623
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+LI+ C +D+A + EM Q + + Y ++ + K F L+E++
Sbjct: 624 VLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGF--SKKFIASLGLLEELESH 681
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVY-EKMKSDDCLPDTS--FYSSLIFILSKAGRV 387
G P Y +++ KA ++ EAL+++ E M+ L TS Y+SLI L A ++
Sbjct: 682 GTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQL 741
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
+ A E++ ++ ++GVVP + + +I ++ AL+L
Sbjct: 742 EKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQL 782
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 3/192 (1%)
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
E+++ G +PS TY ++ L A Q++ +V ++M D L K G
Sbjct: 30 ELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMDKFTVGCFAQALCKEG 89
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
R DA + E ++ + + MIS S + A+ L +M + C P+ TY
Sbjct: 90 RWSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYR 146
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
LL +KK++ ++ M K + + + SLV + A + M
Sbjct: 147 TLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMADC 206
Query: 506 GIVPYHSTYKML 517
G P + Y +
Sbjct: 207 GCPPGYVAYNIF 218
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/314 (30%), Positives = 161/314 (51%), Gaps = 9/314 (2%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN---SVEHAYKVFLEFKDCIPLSSQI 268
R++ EAF+ YG + + LM L+K N VE+ YK + K I +
Sbjct: 168 RFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRK--IQPNVFT 225
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR---EKDFRKVDDTLK 325
FN++I+ CKT K++ A+ M++M G+SP+VVSY I+ YC+ K D LK
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM E P++ T+ I++ K + +LKV+++M D +P+ Y+SLI L G
Sbjct: 286 EMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGG 345
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
++ +A + + M GV PN++TY+++I+ C + AL + ++ +P Y
Sbjct: 346 KINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYN 405
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ C+ ++ L M + + D GTY L+ GL +G +E A F+++ +K
Sbjct: 406 MLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNK 465
Query: 506 GIVPYHSTYKMLEE 519
G+ P T+ +L E
Sbjct: 466 GL-PDLVTFHILME 478
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 191/368 (51%), Gaps = 11/368 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY----VSLATMSTIMRRLVRGGRYDDAVEA 219
+N +++ L K+ K +++++M GY VS T+ +L G+ A
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVY--GYSPNVVSYNTLIDGYCKLGGNGKMYKADAV 283
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWC 277
+ M + V + ++L+D K +++ + KVF E +D IP + +N LI+G C
Sbjct: 284 LKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP-NVITYNSLINGLC 342
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K+++A +M G P++++Y I +C+ ++ D ++ +G +P+
Sbjct: 343 NGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTR 402
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y +++ A K +I++ + E+M+ + +PD Y+ LI L + G ++ A ++F+ +
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+G+ P+++T++ ++ C+R E A LL++M + KP TY ++K C++ +
Sbjct: 463 TNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNL 521
Query: 458 KVLNFLLTHMFK-NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
K + T M K + M+ +Y L++G + GKLE A EM+ KG+VP TY++
Sbjct: 522 KAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEI 581
Query: 517 LEEKLEKK 524
++E++ K
Sbjct: 582 VKEEMVDK 589
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 128/285 (44%), Gaps = 5/285 (1%)
Query: 238 LMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
+D V+ S + +F C + ++S I ++L+ + + + +A K
Sbjct: 123 FLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYY 182
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G+ +S + ++ V+ KEM + +P+V T+ +V++AL K ++N+A
Sbjct: 183 GYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242
Query: 356 LKVYEKMKSDDCLPDTSFYSSLI---FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
V E MK P+ Y++LI L G++ A+ + ++M + V PN+ T+N +
Sbjct: 243 RDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNIL 302
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
I +LK+ ++M + P+ TY L+ C ++ + M V
Sbjct: 303 IDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGV 362
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ TY SL+ G ++G ++ A F+ + +G P Y ML
Sbjct: 363 QPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNML 407
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 148/313 (47%), Gaps = 4/313 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + +R L GGR ++AV M Y + D + LM L K + V+ A +
Sbjct: 152 TCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRM 210
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ CIP +N +I G+CK + +A + +K+ +GF PD V+Y I C E D
Sbjct: 211 MNQGCIP-DDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGD 269
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + E Q K KP ++ Y ++ L + I AL+V +M D C PD Y+
Sbjct: 270 VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNI 329
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L K G + DA + D +G +P+V T+NTMI C R + ++AL+L+++M
Sbjct: 330 VINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYG 389
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY +L C+ + K +N M +A TY L+ + +LE A
Sbjct: 390 IAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEAS 449
Query: 497 SFFEEMISKGIVP 509
M G+VP
Sbjct: 450 GVIVRMSQDGLVP 462
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/357 (27%), Positives = 168/357 (47%), Gaps = 12/357 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++D K EL+K D + G+V T +++ L G + A+E F
Sbjct: 222 YNTIIDGYCKRDMLQEATELLK--DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNE 279
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTR 280
+ ++ D + L+ L + + HA +V E + C P +NI+I+G CK
Sbjct: 280 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHP-DIWTYNIVINGLCKMG 338
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ DA M + +G+ PDV ++ I+ YC+ ++ M G P ITY
Sbjct: 339 NISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYN 398
Query: 341 IVMHAL---GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
V++ L GKAK++NE +E+M C P+ Y+ LI K ++++A+ + M
Sbjct: 399 SVLNGLCKAGKAKEVNET---FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRM 455
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ G+VP+ +++NT+I C + + A L QK++E +T+ L+ K M
Sbjct: 456 SQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNM 515
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ + M D TY LV G ++ ++ A EM+SKG VP +T+
Sbjct: 516 QMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATF 572
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 157/330 (47%)
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+ +AT + ++ L + G ++ + K G+ + ++ + L +G +E A
Sbjct: 112 FPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVA 171
Query: 254 VFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ I +N L+ G CK KV +A + ++ M QG PD +Y I+ YC+
Sbjct: 172 LVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCK 231
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
++ + LK+ KG P +TY +++ L + AL+++ + ++ D PD
Sbjct: 232 RDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVV 291
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+SL+ L + G + A ++ +M + G P++ TYN +I+ C +A ++
Sbjct: 292 YNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAI 351
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
PD T+ ++ C++ ++ L+ M+ ++ DA TY S++ GL ++GK +
Sbjct: 352 VKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAK 411
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
FEEMI KG P TY +L E K
Sbjct: 412 EVNETFEEMILKGCRPNAITYNILIENFCK 441
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 150/315 (47%), Gaps = 3/315 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L +++++ L R G A++ M + G D +++++ L K ++ A V
Sbjct: 289 LVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMN 348
Query: 257 E--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ K +P FN +I G+CK K+D A + ++ M+ G +PD ++Y + C+
Sbjct: 349 DAIVKGYLP-DVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKA 407
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
++V++T +EM KGC+P+ ITY I++ K Q+ EA V +M D +PDT +
Sbjct: 408 GKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISF 467
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI + G + A +F+ + ++G T+N +I + ++ + A K+ +M
Sbjct: 468 NTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMIS 527
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
KPD TY L+ C+ + L M T+ ++ L + ++
Sbjct: 528 KGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSE 587
Query: 495 ACSFFEEMISKGIVP 509
A + M+ G+VP
Sbjct: 588 AVAIIHIMVRMGVVP 602
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 122/298 (40%), Gaps = 34/298 (11%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P ++ +N ++ T D A K M G +PD ++T I+ +C
Sbjct: 7 PPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALR 66
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L+ + E+GC + Y V+ L +A ++++M D PD + +++++ L
Sbjct: 67 LLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALC 126
Query: 383 KAGRVKDANEIFEDMKKQG----------------------------------VVPNVLT 408
+ G + ++ + + K+G + P+V+T
Sbjct: 127 QKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDVVT 186
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YNT++ C S+ + A + L++M C PD TY ++ C++ ++ LL
Sbjct: 187 YNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAI 246
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
D TY SL+ GL G +E A F E +K + P Y L + L ++ L
Sbjct: 247 FKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGL 304
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 124/261 (47%), Gaps = 4/261 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY+ +NTM+D K K +LV+ M ++ T ++++ L + G+ +
Sbjct: 354 GYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAI-TYNSVLNGLCKAGKAKE 412
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIH 274
E F M G + ++L++ K N +E A V + +D + + FN LIH
Sbjct: 413 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIH 472
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C+ +D A +++ ++G+S ++ I Y + + + + EM KG KP
Sbjct: 473 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 532
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ TY +++ KA ++ A +M S +P + + ++ L+ RV +A I
Sbjct: 533 DLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAII 592
Query: 395 EDMKKQGVVPNVLTYNTMISS 415
M + GVVP V+ +T++S+
Sbjct: 593 HIMVRMGVVPEVV--DTILST 611
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 83/190 (43%), Gaps = 3/190 (1%)
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
GC P+ Y +M AL ++A KVY +M S PD ++ I GR A
Sbjct: 5 GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ + ++G L Y T++ A +A L +M PD T+ +L
Sbjct: 65 LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHA 124
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM---ISKGI 507
C+K + LL + K +S++ T +RGL E G+LE A + E M I+ +
Sbjct: 125 LCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAYIAPDV 184
Query: 508 VPYHSTYKML 517
V Y++ + L
Sbjct: 185 VTYNTLMRGL 194
>gi|326523953|dbj|BAJ96987.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/286 (30%), Positives = 148/286 (51%), Gaps = 4/286 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ ++D +GKS + M ++ +EM N GY S T +TI+ LV+ D+A+ +
Sbjct: 804 YHLILDAMGKSMRIEDMLKIQEEMH--NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQ 861
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
+ G L+D L+K ++E A +F E +C + I+NIL++G+
Sbjct: 862 LMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIAGD 921
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ + + M +QG +PD+ SYT I+ C + K++ + G +P +ITY +
Sbjct: 922 TEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITYNL 981
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H LGK+ ++ EAL +Y M+ P+ Y+SLI L KAG+ +A +++E++ +G
Sbjct: 982 LIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLAKG 1041
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
PNV TYN +I ENA +M C+P+ TY L
Sbjct: 1042 WKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQL 1087
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 157/352 (44%), Gaps = 6/352 (1%)
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLATMS--TIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
K K+ ELVK+ + L VSL T S ++ LV D A E F MK+ G +
Sbjct: 743 KHKEALAAHELVKKFENLG---VSLKTGSYNALICGLVDEDLIDIAEELFSEMKRLGCDP 799
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAM 289
D +++D + K +E K+ E + S+ + +N +I G K++ +D+A
Sbjct: 800 DEFTYHLILDAMGKSMRIEDMLKIQEEMHNKGYKSTYVTYNTIISGLVKSKMLDEAINLY 859
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
++ +GFSP +Y ++ ++ + + EM E GC+P+ Y I+++ A
Sbjct: 860 YQLMSEGFSPTPCTYGPLLDGLLKDGNIEDAEALFDEMLECGCEPNCAIYNILLNGYRIA 919
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+ +++E M PD Y+ +I L GR+ D F+ + G+ P+++TY
Sbjct: 920 GDTEKVCELFESMVEQGMNPDIKSYTVVIDTLCADGRLNDGLSYFKQLTDMGLEPDLITY 979
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N +I E AL L ME+ P+ TY L+ + + + +
Sbjct: 980 NLLIHGLGKSGRLEEALSLYNDMEKKGIAPNLYTYNSLILYLGKAGKAAEAGKMYEELLA 1039
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ TY +L+RG SG E A + + MI G P STY L ++
Sbjct: 1040 KGWKPNVFTYNALIRGYSVSGSPENAFAAYGRMIVGGCRPNSSTYMQLPNQM 1091
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/369 (23%), Positives = 160/369 (43%), Gaps = 43/369 (11%)
Query: 172 GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
G S+ +W +K D N+ VS + + L + GR D+A++ F MK+ G+
Sbjct: 325 GDSRSVSEIWNALKA-DGYNDNVVSY---TAAVDALCQVGRVDEALDVFDEMKQKGIIPQ 380
Query: 232 TRALSVLMDTLVKGNSVEHAYKVF------------------------------------ 255
+ + L+ +K + A ++F
Sbjct: 381 QYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYE 440
Query: 256 -LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
++ K +P N +++G KT ++ A++ E+ G SPD ++YT I+ +
Sbjct: 441 LMKSKGIVP-DVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKA 499
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + EM E C P V+ ++ L KA + NEA K++ ++K + P Y
Sbjct: 500 SNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTY 559
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++L+ L + G+VK+ ++ E M PN++TYNT++ C E AL +L M
Sbjct: 560 NTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTM 619
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+ C PD +Y ++ ++ R+ ++ M K ++ D T +++ + SG ++
Sbjct: 620 NGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQM-KKVLAPDYATVCTILPSFVRSGLMKE 678
Query: 495 ACSFFEEMI 503
A E I
Sbjct: 679 ALHTVREYI 687
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 197/464 (42%), Gaps = 83/464 (17%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEM---------YNTMVDVLGKSKKFCLM 180
V T+R +S L AFG A+T G + E Y + VLG++ +
Sbjct: 202 VVPTVRTYSV-LMLAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEA 260
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK---------------- 224
+ ++++M+E + T + +++ L GR DA + F MK
Sbjct: 261 YRILRKMEE-EGCKPDVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLD 319
Query: 225 KYGVEKDTRALSVL-------------------MDTLVKGNSVEHAYKVFLEFKDCIPLS 265
K G D+R++S + +D L + V+ A VF E K +
Sbjct: 320 KCGDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIP 379
Query: 266 SQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
Q +N LI G+ K + + A + M G +P+ ++ FI ++ + + K
Sbjct: 380 QQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRY 439
Query: 325 KEMQEKGCKPSV-----------------------------------ITYTIVMHALGKA 349
+ M+ KG P V ITYT+++ KA
Sbjct: 440 ELMKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKA 499
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+EA+K++ +M + C PD +SLI +L KAGR +A +IF ++K+ + P TY
Sbjct: 500 SNADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKIFYELKEMNLEPTDCTY 559
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
NT+++ + + ++LL+ M + P+ TY +L C+ + +L M
Sbjct: 560 NTLLAGLGREGKVKEVMQLLEGMNSNSFPPNIITYNTVLDCLCKNGEVNYALDMLYSMTM 619
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
N D +Y +++ GL++ G+L+ A F +M K + P ++T
Sbjct: 620 NGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQM-KKVLAPDYAT 662
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 150/346 (43%), Gaps = 38/346 (10%)
Query: 204 MRRLVRG-GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC- 261
M L+R GR D + F M++ ++ + + + + A K+
Sbjct: 107 MLELMRAHGRVGDVAQVFDLMQRQIIKANVGTFCTVFGAVGVEGGLRSAPVALPVMKEAG 166
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
I L++ +N LI+ K+ +A K M G P V +Y+ + + + +D V
Sbjct: 167 IVLNAYTYNGLIYFLVKSGFDREAMDVYKAMAADGVVPTVRTYSVLMLAFGKRRDAETVV 226
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L EM+ +G +P+V +YTI + LG+A ++ EA ++ KM+ + C PD + LI IL
Sbjct: 227 GLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYRILRKMEEEGCKPDVVTNTVLIQIL 286
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
AGR+ DA ++F MK P+ +TY T++ C S + ++
Sbjct: 287 CDAGRLADAKDVFWKMKASDQKPDRVTYITLLDK-CGDSGDSRSVS-------------- 331
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
++ N L + ++V +Y + V L + G+++ A F+E
Sbjct: 332 ----------------EIWNALKADGYNDNVV----SYTAAVDALCQVGRVDEALDVFDE 371
Query: 502 MISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
M KGI+P +Y ++ L+ R A E N + H +
Sbjct: 372 MKQKGIIPQQYSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGY 417
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 92/400 (23%), Positives = 174/400 (43%), Gaps = 45/400 (11%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV------ 217
YNT++D L K+ + +++ M +N L++ +T+M LV+ GR D+A
Sbjct: 594 YNTVLDCLCKNGEVNYALDMLYSM-TMNGCMPDLSSYNTVMYGLVKEGRLDEAFWMFCQM 652
Query: 218 -------------------------EAFRGMKKYGVEKDTR----ALSVLMDTLVKGNSV 248
EA +++Y ++ D++ ++ LM+ ++K +
Sbjct: 653 KKVLAPDYATVCTILPSFVRSGLMKEALHTVREYILQPDSKVDRSSVHSLMEGILKRDGT 712
Query: 249 EHAYKVFLEFKDCIPLSSQIFNIL-----IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
E + +EF + I S + + L I +CK ++ A + +K+ G S S
Sbjct: 713 EKS----IEFAENIASSGLLLDDLFLSPIIRHFCKHKEALAAHELVKKFENLGVSLKTGS 768
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y I E ++ EM+ GC P TY +++ A+GK+ +I + LK+ E+M
Sbjct: 769 YNALICGLVDEDLIDIAEELFSEMKRLGCDPDEFTYHLILDAMGKSMRIEDMLKIQEEMH 828
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
+ Y+++I L K+ + +A ++ + +G P TY ++ E
Sbjct: 829 NKGYKSTYVTYNTIISGLVKSKMLDEAINLYYQLMSEGFSPTPCTYGPLLDGLLKDGNIE 888
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
+A L +M E C+P+C Y LL + + L M + ++ D +Y ++
Sbjct: 889 DAEALFDEMLECGCEPNCAIYNILLNGYRIAGDTEKVCELFESMVEQGMNPDIKSYTVVI 948
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
L G+L S+F+++ G+ P TY +L L K
Sbjct: 949 DTLCADGRLNDGLSYFKQLTDMGLEPDLITYNLLIHGLGK 988
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 146/342 (42%), Gaps = 7/342 (2%)
Query: 196 SLATMSTIMRRLVRGGRYD-DAVEAFRG-MKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
++ T S +M L G R D + V G M+ GV + + ++ + L + +E AY+
Sbjct: 205 TVRTYSVLM--LAFGKRRDAETVVGLLGEMEARGVRPNVYSYTICIRVLGQAGRLEEAYR 262
Query: 254 VF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
+ +E + C P +LI C ++ DA+ +M PD V+Y ++
Sbjct: 263 ILRKMEEEGCKP-DVVTNTVLIQILCDAGRLADAKDVFWKMKASDQKPDRVTYITLLDKC 321
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
D R V + ++ G +V++YT + AL + +++EAL V+++MK +P
Sbjct: 322 GDSGDSRSVSEIWNALKADGYNDNVVSYTAAVDALCQVGRVDEALDVFDEMKQKGIIPQQ 381
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y+SLI KA R A E+F M G PN T+ I+ E ALK +
Sbjct: 382 YSYNSLISGFLKADRFNRALELFNHMNIHGPTPNGYTHVLFINYHGKSGESLKALKRYEL 441
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M+ PD +L + R+ + + + +S D TY +++ ++
Sbjct: 442 MKSKGIVPDVVAGNAVLYGLAKTGRLGMAKRVFHELKAMGISPDNITYTMMIKCCSKASN 501
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ A F EMI P L + L K GN +I
Sbjct: 502 ADEAMKIFAEMIENRCAPDVLAMNSLIDMLYKAGRGNEAWKI 543
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 202/452 (44%), Gaps = 56/452 (12%)
Query: 124 SVSNSLVEQTLRRFSNDLTPA--FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
S+S + V QTL+ TPA FF W + + G+ H + Y M+++LG+S+
Sbjct: 92 SLSKTTVLQTLQLIR---TPAKALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAAR 147
Query: 182 ELVKEMDELNNGYVSLAT--MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
V +++ + G V L ++++R G + ++++ F+ MK+ GV + L+
Sbjct: 148 NFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLL 207
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLS--SQIFNILIHGWCKTRKVDDAQKAMKEMFQ--- 294
++K A ++F E D ++ + FNILI G+C VD+ KEM +
Sbjct: 208 SIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKC 267
Query: 295 ----------------------------------QGFSPDVVSYTCFIEHYCREKDFRKV 320
SP+VV+YT I YC ++D +
Sbjct: 268 DPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEA 327
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC-LPDTSFYSSLIF 379
L EM +G KP+ ITY ++ L +A+++++ ++ E M D +PDT ++LI
Sbjct: 328 LSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIK 387
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE----- 434
G++++A +FE M + V P+ TY+ ++ S C R + A + ++ E
Sbjct: 388 AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 447
Query: 435 -DL-CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
D+ CKP Y P+ + C + K + + K + D +Y +L+ G G
Sbjct: 448 HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTP 506
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
E M+ + VP TY ++ + L KK
Sbjct: 507 EAGFDLLVLMLRRDFVPDAETYGLMIDGLLKK 538
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 167/378 (44%), Gaps = 17/378 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++ L +++K + E+++ M + G++ T++T+++ G+ ++A F
Sbjct: 346 YNTLIQGLCEAQKLDKIKEILEGMVG-DGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEK 404
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD---------CIPLSSQIFNILI 273
M + V+ D+ SVL+ +L + A + F E + C PL + +N +
Sbjct: 405 MSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAA-YNPMF 463
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
C K A++ +++ ++G + D SY I +CRE D L M +
Sbjct: 464 EYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFV 522
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P TY +++ L K A K EKM LP T+ + S++ L + G ++ +
Sbjct: 523 PDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASL 582
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+ M ++ + N+ + ++ A + + E+ E L C
Sbjct: 583 VKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFL--CQS 640
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+K ++ LL + K S+D ++++ GL ++ K+ A + + E++ KG+ +
Sbjct: 641 RKLLEAQKMLLFSLEKRQ-SVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTC 699
Query: 514 YKMLEEKLEKK-RLGNAK 530
+ L LE + RL AK
Sbjct: 700 QEDLRISLEAEGRLNEAK 717
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/364 (27%), Positives = 179/364 (49%), Gaps = 10/364 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N ++ + K KKF L+ L + GY S+ T+S+++ G R DAV
Sbjct: 45 FNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQ 104
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M + G DT + L+ L N A + + + C P + + ++++G CK
Sbjct: 105 MVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQP-NLVTYGVVVNGLCKRG 163
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSVI 337
+D A + +M DVV + I+ C+ +R VDD L KEM+ KG +P+V+
Sbjct: 164 DIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK---YRHVDDALNLFKEMETKGIRPNVV 220
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY+ ++ L + ++A ++ M P+ +++LI K G+ +A ++ +DM
Sbjct: 221 TYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDM 280
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
K+ + P++ TYN++I+ C + A ++ + M C PD +TY L+K C+ KR+
Sbjct: 281 IKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRV 340
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ L M + D TY +L++GL G + A F++M+S G+ P TY +L
Sbjct: 341 EDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 400
Query: 518 EEKL 521
+ L
Sbjct: 401 LDGL 404
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 169/333 (50%), Gaps = 3/333 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T ++ L + G D A M+ +E D + ++D+L K V+ A +F
Sbjct: 148 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 207
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+E K P + ++ LI C + DA + + +M ++ +P++V++ I+ + +
Sbjct: 208 KEMETKGIRP-NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 266
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E F + + +M ++ P + TY +++ ++++A +++E M S DC PD
Sbjct: 267 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 326
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI K+ RV+D E+F +M +G+V + +TY T+I + +NA K+ ++M
Sbjct: 327 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 386
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
D PD TY+ LL C +++ + +M K+++ +D Y +++ G+ ++GK++
Sbjct: 387 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 446
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
F + KG+ P TY + L KRL
Sbjct: 447 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 479
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 163/312 (52%), Gaps = 9/312 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T + ++ V+ G++ +A + M K ++ D + L++ + ++ A ++F
Sbjct: 253 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 312
Query: 256 LEF---KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
EF KDC P +N LI G+CK+++V+D + +EM +G D V+YT I+
Sbjct: 313 -EFMVSKDCFP-DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 370
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ D K+M G P ++TY+I++ L ++ +AL+V++ M+ + D
Sbjct: 371 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 430
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+++I + KAG+V D ++F + +GV PNV+TYNTMIS C++ + A LL+KM
Sbjct: 431 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 490
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ED PD TY L++ R L+ M DA T LV ++ G+L
Sbjct: 491 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRL 549
Query: 493 ELACSFFEEMIS 504
+ + F +M+S
Sbjct: 550 DKS---FLDMLS 558
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 115/251 (45%), Gaps = 2/251 (0%)
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT--LKEMQEKGCK 333
W K K+DDA M + P + + + + K F V L +M + G +
Sbjct: 17 WGKDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYE 76
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
PS++T + +++ K+I++A+ + ++M PDT +++LI L + +A +
Sbjct: 77 PSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVAL 136
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+ M ++G PN++TY +++ C R + + A LL KME + D + ++ C+
Sbjct: 137 VDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCK 196
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+ + L M + + TY+SL+ L G+ A +MI K I P T
Sbjct: 197 YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256
Query: 514 YKMLEEKLEKK 524
+ L + K+
Sbjct: 257 FNALIDAFVKE 267
>gi|414869157|tpg|DAA47714.1| TPA: hypothetical protein ZEAMMB73_516901 [Zea mays]
Length = 853
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 161/315 (51%), Gaps = 5/315 (1%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
+D T A GFF W K Q G+ H Y TM+ +LG++++F ++ EL+ EM + ++
Sbjct: 338 HDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHC-KPTVV 396
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + I+ R +AV+ F M++ G E D L+D K ++ A ++
Sbjct: 397 TYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Query: 259 KDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
++ + LS F +++++ K ++ A K EM + G +P++V+Y I + ++
Sbjct: 457 QE-VGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARN 515
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ V K+MQ G +P ITY+IVM LG ++EA V+ +M+ D PD Y
Sbjct: 516 YENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGL 574
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ + KAG V A ++ M + G+ PNV T N+++S+ + ++A +LQ M
Sbjct: 575 LVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLARG 634
Query: 437 CKPDCETYAPLLKMC 451
P +TY LL C
Sbjct: 635 LVPSVQTYTLLLSCC 649
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 113/224 (50%), Gaps = 1/224 (0%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q GF D +YT I + + F + + L EM CKP+V+TY ++HA G+A +
Sbjct: 353 QPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTVVTYNRIIHAYGRANYLK 412
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EA+KV+E+M+ PD Y +LI I +KAG + A +++ M++ G+ P+ TY+ M+
Sbjct: 413 EAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQEVGLSPDTFTYSVMV 472
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ + A KL +M E+ C P+ TY ++ + + + + + L M
Sbjct: 473 NCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYENVVKLYKDMQVAGFR 532
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
D TY+ ++ L G L+ A + F EM + P Y +L
Sbjct: 533 PDKITYSIVMEVLGHCGHLDEAEAVFIEM-RRDWAPDEPVYGLL 575
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 140/298 (46%), Gaps = 2/298 (0%)
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
L+ ++V + +L+ + + +I + R+ ++ + EM + P V
Sbjct: 336 LLHDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKELLDEMSRAHCKPTV 395
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
V+Y I Y R ++ +EMQE G +P +TY ++ KA ++ A+ +Y +
Sbjct: 396 VTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGR 455
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M+ PDT YS ++ L K G++ A ++F +M + G PN++TYN MI+
Sbjct: 456 MQEVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARN 515
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
EN +KL + M+ +PD TY+ ++++ + + M + D + D Y
Sbjct: 516 YENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM-RRDWAPDEPVYGL 574
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHST-YKMLEEKLEKKRLGNAKERINKLLA 538
LV ++G ++ A +++ M+ G+ P T +L L+ R +A + +LA
Sbjct: 575 LVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLA 632
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/252 (25%), Positives = 127/252 (50%), Gaps = 7/252 (2%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N +IH + + + +A K +EM + G+ PD V+Y I+ + + D MQ
Sbjct: 398 YNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQ 457
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E G P TY+++++ LGK Q+ A K++ +M + C P+ Y+ +I + +KA +
Sbjct: 458 EVGLSPDTFTYSVMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYE 517
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMIS--SACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ ++++DM+ G P+ +TY+ ++ C +E A+ + +M D PD Y
Sbjct: 518 NVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFI--EMRRDWA-PDEPVYGL 574
Query: 447 LLKMCCRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ + + + K L + M ++ + + T SL+ ++ + + A + M+++
Sbjct: 575 LVDLWGKAGNVDKALGWYQA-MLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLAR 633
Query: 506 GIVPYHSTYKML 517
G+VP TY +L
Sbjct: 634 GLVPSVQTYTLL 645
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 190/397 (47%), Gaps = 40/397 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL-ATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+T+++ K++ F + L+ EM++ G V A +TI++ L GR D A+ +R
Sbjct: 36 YSTLINGFCKARDFQQAYRLLDEMEK--RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRD 93
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIP----------------- 263
M+++ ++L+D L K + A + + + C P
Sbjct: 94 MQRH-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGN 152
Query: 264 ------LSSQI-----------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
L +Q+ +NILI G+CK + D K ++EM + G P+ ++Y
Sbjct: 153 MDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNT 212
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
++ + + + + M + CKPS T+ +++ K Q++ A ++++ M
Sbjct: 213 LMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG 272
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
CLPD Y+ +I +A R+ DA ++ E M + G P+V+TYN+++S C S+ + A
Sbjct: 273 CLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAY 332
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
++ + + D T + L+ C+ +R+ LL M +N + D Y L+ G
Sbjct: 333 EVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 392
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
++ +L+ + +FF EM+ KG VP TY ++ +KL K
Sbjct: 393 CKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCK 429
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 150/311 (48%), Gaps = 4/311 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ K L +M E N+ + T + ++ + R D + + M
Sbjct: 140 YNTLINGFCKLGNMDEAVVLFNQMLE-NSCSPDVFTYNILIDGYCKQERPQDGAKLLQEM 198
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDCIPLSSQIFNILIHGWCKTRK 281
KYG E + + LMD+LVK A+ + + +DC P S FN++I +CK +
Sbjct: 199 VKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP-SHFTFNLMIDMFCKVGQ 257
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A + + M +G PD+ +Y I CR L+ M E GC P V+TY
Sbjct: 258 LDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNS 317
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L KA Q++EA +VYE +++ D S+LI L K+ R+ DA ++ +M++ G
Sbjct: 318 IVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNG 377
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+V+ Y +I C + + +L +M + C P TY+ ++ C+ R++
Sbjct: 378 SAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGC 437
Query: 462 FLLTHMFKNDV 472
LL M + V
Sbjct: 438 MLLKTMLERGV 448
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 127/248 (51%), Gaps = 1/248 (0%)
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N L+ + + +K +A K SPD ++Y+ I +C+ +DF++ L EM++
Sbjct: 2 NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+G P Y ++ L +++ AL Y M+ C P Y+ L+ L K+ R+ D
Sbjct: 62 RGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-HCAPSVITYTILVDALCKSARISD 120
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A+ I EDM + G PNV+TYNT+I+ C + A+ L +M E+ C PD TY L+
Sbjct: 121 ASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILID 180
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+++R + LL M K + TY +L+ L++SGK A + + M+ + P
Sbjct: 181 GYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKP 240
Query: 510 YHSTYKML 517
H T+ ++
Sbjct: 241 SHFTFNLM 248
>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
Japonica Group]
Length = 629
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 164/325 (50%), Gaps = 41/325 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++D + + +ELV++M+ N G ++ T++TI+ L R GR A+E FR
Sbjct: 249 YNCLIDAFCRVGNISMAYELVEKME--NEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE 306
Query: 223 MKKYGVEKDTRAL--SVLMDTLVKGNSVEHAYKVFLE----------------------- 257
+ E A+ S L+ L+ N+V A ++F E
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366
Query: 258 --FKDCIPLSSQI-----------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+D ++S + +NILI G+C+ +++ +A + ++EM + G PDV +Y
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ C+ DF VD+ L +M + GC+PSVIT+ ++H K +I+EAL++ M
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
P+ Y++LI L K G V A E+F++MK++ V NV T+N ++ ++ E
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLK 449
A +L+ +M E+ C PD T L++
Sbjct: 547 AFELMDQMREERCFPDYVTVDVLME 571
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 184/410 (44%), Gaps = 18/410 (4%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
++++ + L RFS+ PA F + +N+++ L + + M +
Sbjct: 103 SAILSKLLARFSSP-EPAARFLAASLAAGAPAPDVFAFNSILAALARVRDVPGMARIYAL 161
Query: 187 MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK--YGVEKDTRALSVLMDTLVK 244
M + + T ++ L + GR DA+ GM + + D L+ ++D L K
Sbjct: 162 MQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCK 221
Query: 245 GNSVEHAYKVFLEFK-----DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
V+ A F+E + C P ++ +N LI +C+ + A + +++M +G
Sbjct: 222 SGRVQEAL-AFVEQRMSSVHGCPP-NTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQ 279
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC-----KPSVITYTIVMHALGKAKQINE 354
++V+ + CR + L+ +EK K + +TY+ ++ AL +
Sbjct: 280 NIVTLNTIVGGLCRAG---RTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGM 336
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A++++ + S+ PD Y ++I L++AGR++DA + MK+ G + YN +I+
Sbjct: 337 AMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIA 396
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C + A +LLQ+M+E +PD TY LL C+ ++ LL M +
Sbjct: 397 GFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQP 456
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
T+ +LV G + GK++ A M GI P + Y L + L K+
Sbjct: 457 SVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKR 506
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 129/277 (46%), Gaps = 4/277 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS-TIMRRLVRGGRYDDAVEAFRG 222
Y+T+V L + + EL E +++ G+ A M T++ L + GR +DA
Sbjct: 321 YSTLVGALLHTNNVGMAMELFHE--KMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASS 378
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
MK+ G + DT+A ++L+ + + AY++ E K+ I +N L+ G CK
Sbjct: 379 MKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGD 438
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ + +M G P V+++ + YC+ + L+ M E G P+ + Y
Sbjct: 439 FAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNT 498
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K ++ A++++++MK + + +++L+ L + A E+ + M+++
Sbjct: 499 LIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREER 558
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
P+ +T + ++ E + + +Q+ E K
Sbjct: 559 CFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTASK 595
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/227 (20%), Positives = 99/227 (43%), Gaps = 8/227 (3%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ + YN ++ + K+ +EL++EM E+ + T +T++ + G +
Sbjct: 381 EAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI-RPDVCTYNTLLSGSCKAGDF 439
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNIL 272
E M G + L+ K ++ A ++ + I ++ I+N L
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF-RKVDDTLKEMQEKG 331
I CK VD A + EM ++ +V ++ ++ R+K+ K + + +M+E+
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL-RDKNMPEKAFELMDQMREER 558
Query: 332 CKPSVITYTIVMH---ALGKAKQINEALKVYEKMKSDDCLPD-TSFY 374
C P +T ++M +G+ ++ ++ E S + D TS Y
Sbjct: 559 CFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTASKRIVSDRTSAY 605
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 114/452 (25%), Positives = 202/452 (44%), Gaps = 56/452 (12%)
Query: 124 SVSNSLVEQTLRRFSNDLTPA--FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
S+S + V QTL+ TPA FF W + + G+ H + Y M+++LG+S+
Sbjct: 92 SLSKTTVLQTLQLIR---TPAKALHFFRWVEAK-GFTHNEQSYFLMIEILGRSRNLNAAR 147
Query: 182 ELVKEMDELNNGYVSLAT--MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
V +++ + G V L ++++R G + ++++ F+ MK+ GV + L+
Sbjct: 148 NFVFSIEKKSGGAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLL 207
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLS--SQIFNILIHGWCKTRKVDDAQKAMKEMFQ--- 294
++K A ++F E D ++ + FNILI G+C VD+ KEM +
Sbjct: 208 SIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKC 267
Query: 295 ----------------------------------QGFSPDVVSYTCFIEHYCREKDFRKV 320
SP+VV+YT I YC ++D +
Sbjct: 268 DPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEA 327
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC-LPDTSFYSSLIF 379
L EM +G KP+ ITY ++ L +A+++++ ++ E M D +PDT ++LI
Sbjct: 328 LSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIK 387
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE----- 434
G++++A +FE M + V P+ TY+ ++ S C R + A + ++ E
Sbjct: 388 AHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILL 447
Query: 435 -DL-CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
D+ CKP Y P+ + C + K + + K + D +Y +L+ G G
Sbjct: 448 HDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTP 506
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
E M+ + VP TY ++ + L KK
Sbjct: 507 EAGFDLLVLMLRRDFVPDAETYGLMIDGLLKK 538
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/417 (20%), Positives = 172/417 (41%), Gaps = 51/417 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELN-NGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT+VD L ++ K + +VK M + + N ++ T +T++R +A+
Sbjct: 274 YNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAE 333
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKT 279
M G++ + + L+ L + ++ ++ + IP + N LI C
Sbjct: 334 MVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIP-DTCTLNTLIKAHCTM 392
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-------GC 332
K+++A ++M + PD +Y+ + C+ DFR+ ++ E+ EK GC
Sbjct: 393 GKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGC 452
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEK------------------------------- 361
KP V Y + L + +A +V+ +
Sbjct: 453 KPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDL 512
Query: 362 ---MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
M D +PD Y +I L K G A++ E M K +P +++++++
Sbjct: 513 LVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVE 572
Query: 419 RSEEENALKLLQKMEEDLCKPDCE----TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
+ + L++ M E + + + T L+ C+ +++ +L + S+
Sbjct: 573 KGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSV 632
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAK 530
D ++++ GL ++ K+ A + + E++ KG+ + + L LE + RL AK
Sbjct: 633 DIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDLRISLEAEGRLNEAK 689
>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
Length = 690
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 160/316 (50%), Gaps = 41/316 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++D + + +ELV++M+ N G ++ T++TI+ L R GR A+E FR
Sbjct: 249 YNCLIDAFCRVGNISMAYELVEKME--NEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE 306
Query: 223 MKKYGVEKDTRAL--SVLMDTLVKGNSVEHAYKVFLE----------------------- 257
+ E A+ S L+ L+ N+V A ++F E
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366
Query: 258 --FKDCIPLSSQI-----------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+D ++S + +NILI G+C+ +++ +A + ++EM + G PDV +Y
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ C+ DF VD+ L +M + GC+PSVIT+ ++H K +I+EAL++ M
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
P+ Y++LI L K G V A E+F++MK++ V NV T+N ++ ++ E
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546
Query: 425 ALKLLQKMEEDLCKPD 440
A +L+ +M E+ C PD
Sbjct: 547 AFELMDQMREERCFPD 562
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 184/410 (44%), Gaps = 18/410 (4%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
++++ + L RFS+ PA F + +N+++ L + + M +
Sbjct: 103 SAILSKLLARFSSP-EPAARFLAASLAAGAPAPDVFAFNSILAALARVRDVPGMARIYAL 161
Query: 187 MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK--YGVEKDTRALSVLMDTLVK 244
M + + T ++ L + GR DA+ GM + + D L+ ++D L K
Sbjct: 162 MQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCK 221
Query: 245 GNSVEHAYKVFLEFK-----DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
V+ A F+E + C P ++ +N LI +C+ + A + +++M +G
Sbjct: 222 SGRVQEAL-AFVEQRMSSVHGCPP-NTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQ 279
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC-----KPSVITYTIVMHALGKAKQINE 354
++V+ + CR + L+ +EK K + +TY+ ++ AL +
Sbjct: 280 NIVTLNTIVGGLCRAG---RTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGM 336
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A++++ + S+ PD Y ++I L++AGR++DA + MK+ G + YN +I+
Sbjct: 337 AMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIA 396
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C + A +LLQ+M+E +PD TY LL C+ ++ LL M +
Sbjct: 397 GFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQP 456
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
T+ +LV G + GK++ A M GI P + Y L + L K+
Sbjct: 457 SVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKR 506
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 86/195 (44%), Gaps = 4/195 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ + YN ++ + K+ +EL++EM E+ + T +T++ + G +
Sbjct: 381 EAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI-RPDVCTYNTLLSGSCKAGDF 439
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNIL 272
E M G + L+ K ++ A ++ + I ++ I+N L
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF-RKVDDTLKEMQEKG 331
I CK VD A + EM ++ +V ++ ++ R+K+ K + + +M+E+
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL-RDKNMPEKAFELMDQMREER 558
Query: 332 CKPSVITYTIVMHAL 346
C P +T ++M L
Sbjct: 559 CFPDYVTVDVLMEWL 573
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 99/329 (30%), Positives = 168/329 (51%), Gaps = 4/329 (1%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG-NSVEHAYKVFLEFKDC-IPL 264
LV G D+A + F M YG+ + ++ + L + + ++ A KVF+EF + +
Sbjct: 192 LVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFVEFPEVGVCW 251
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
++ +NI+ H C+ +V +A + + +M +G PDV+SY+ I YC+ + ++V +
Sbjct: 252 NTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLI 311
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+EMQ KG KP+ TY V+ L K ++ EA +V +M S+ PD Y++LI K
Sbjct: 312 EEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKL 371
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G V A +F++M+K+ + P+ +TY +I C A KL +M +PD TY
Sbjct: 372 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 431
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ C++ +MK L M + ++ + TY +L GL + G+++ A EM
Sbjct: 432 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 491
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
KG+ TY L L K GN + +
Sbjct: 492 KGLELNIYTYNSLVNGLCKA--GNIDQAV 518
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 164/355 (46%), Gaps = 2/355 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN + L + + +L+ +M EL + + ST++ + G ++ M
Sbjct: 256 YNIITHSLCQLGRVVEAHQLLLQM-ELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEM 314
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
+ G++ + + ++ L K V A +V E + I I+ LI G+CK V
Sbjct: 315 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNV 374
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A + EM ++ SPD ++YT I C+ + D EM K +P +TYT +
Sbjct: 375 SSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTAL 434
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ K ++ EA ++ +M P+ Y++L L K G V ANE+ +M ++G+
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 494
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
N+ TYN++++ C + A+KL++ ME PD TY L+ C+ + M +
Sbjct: 495 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 554
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M ++ T+ L+ G SG LE + M+ KGI+P +TY L
Sbjct: 555 LLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL 609
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 175/373 (46%), Gaps = 6/373 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM-STIMRRLVRGGRYD 214
G P YN ++ +L K+ K +++EM ++ G + +T++ + G
Sbjct: 318 GLKPNPYTYNGVILLLCKTGKVAEAERVLREM--ISEGIAPDGVIYTTLIDGFCKLGNVS 375
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ--IFNIL 272
A F M+K + D + ++ L + V A K+F E C L + L
Sbjct: 376 SAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMV-CKRLEPDEVTYTAL 434
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I G+CK K+ +A +M Q G +P++V+YT + C+ + ++ L EM KG
Sbjct: 435 IDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGL 494
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+ ++ TY +++ L KA I++A+K+ + M+ PD Y++L+ K+ + A+E
Sbjct: 495 ELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHE 554
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ M + + P V+T+N +++ C E+ KLL+ M E P+ TY L+K C
Sbjct: 555 LLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYC 614
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ M+ + M V D TY L++G ++ ++ A +M+ KG S
Sbjct: 615 IRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVS 674
Query: 513 TYKMLEEKLEKKR 525
+Y L + K++
Sbjct: 675 SYNALIKGFYKRK 687
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 148/323 (45%), Gaps = 36/323 (11%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T + ++ + G+ +A M + G+ + + L D L K V+ A ++ E
Sbjct: 429 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 488
Query: 258 F-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ + L+ +N L++G CK +D A K MK+M GF PD V+YT ++ YC+ ++
Sbjct: 489 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 548
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + L++M ++ +P+V+T+ ++M+ C+
Sbjct: 549 MVRAHELLRQMLDRELQPTVVTFNVLMNGF--------------------CM-------- 580
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+G ++D ++ + M ++G++PN TYN++I C R+ ++ + M
Sbjct: 581 -------SGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKG 633
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY L+K C+ + MK FL M ++ +Y +L++G + K A
Sbjct: 634 VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEAR 693
Query: 497 SFFEEMISKGIVPYHSTYKMLEE 519
FE+M +G+V Y + +
Sbjct: 694 ELFEQMRREGLVADREIYNIFAD 716
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 70/293 (23%), Positives = 126/293 (43%), Gaps = 36/293 (12%)
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV------ 320
++F+I + +D+A+K +M G V S FI H + D K+
Sbjct: 183 RVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKVFV 242
Query: 321 ------------------------------DDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
L +M+ +GC P VI+Y+ V++ +
Sbjct: 243 EFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVG 302
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++ LK+ E+M+ P+ Y+ +I +L K G+V +A + +M +G+ P+ + Y
Sbjct: 303 ELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYT 362
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
T+I C +A +L +M++ PD TY ++ C+ R+ + L M
Sbjct: 363 TLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK 422
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ D TY +L+ G + GK++ A S +M+ G+ P TY L + L K
Sbjct: 423 RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 475
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 133/295 (45%), Gaps = 10/295 (3%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM----DELNNGYVSLATMSTIMRRLVR 209
Q G Y + D L K + EL+ EM ELN + T ++++ L +
Sbjct: 456 QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELN-----IYTYNSLVNGLCK 510
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQI 268
G D AV+ + M+ G D + LMD K + A+++ + D + +
Sbjct: 511 AGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVT 570
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FN+L++G+C + ++D +K +K M ++G P+ +Y I+ YC + R + + M
Sbjct: 571 FNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMC 630
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
KG P TY I++ KA+ + EA ++ M S Y++LI K +
Sbjct: 631 AKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFL 690
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
+A E+FE M+++G+V + YN + E L+L + E D +T
Sbjct: 691 EARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQT 745
>gi|297849270|ref|XP_002892516.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338358|gb|EFH68775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 607
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 120/487 (24%), Positives = 222/487 (45%), Gaps = 42/487 (8%)
Query: 82 SRISSRVLS-----------ENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLV 130
SR+SS +LS +N++ + K+S + Y+ P + C S+ N L
Sbjct: 20 SRVSSSLLSTWYSPESISADDNNDPVLVKLSVAIRDSYKDPPLEFSSFAACS-SIRNVLP 78
Query: 131 EQTLRRF-----SNDLT----PAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
++R N L+ F FF + +Q + T E Y M L + F
Sbjct: 79 SLSVRHVVDLINRNPLSLPHRSIFAFFKFISSQPEFRFTVETYFVMARFLAIHEMFVEAQ 138
Query: 182 ELV------KEMDELNNGYVSLATM----------STIMRRLVRGGRYDDAVEAFRGMKK 225
L+ K + ++ ++SL M +M + G D ++ FR +K
Sbjct: 139 SLIELVVSRKGKNSASSVFISLVEMRGTPMCDFLVDALMITYMDLGFIPDVIQCFRLSRK 198
Query: 226 YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDD 284
+ R L+D ++K N + ++E D PL+ +FNIL++ +CK + D
Sbjct: 199 HNFVVPIRGCGNLLDRMMKLNPTGTVWGFYMEILDAGFPLNVYVFNILMNKFCKEGNICD 258
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-CKPSVITYTIVM 343
AQK E+ ++ P VVS+ I YC+ + V LK EK +P V TY+ ++
Sbjct: 259 AQKVFDEITKRSLRPTVVSFNTLINGYCKVGNL-DVGFRLKHHMEKSRTRPDVFTYSALI 317
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+AL K +++ A +++ +M +P+ +++LI S+ G++ E ++ M +G+
Sbjct: 318 NALCKENKMDGAHRLFYEMCERGLIPNDVIFTTLIHGHSRNGQIDLMKESYQKMLSKGLQ 377
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P+++ YNT+++ C + A ++ M +PD TY L+ CR + +
Sbjct: 378 PDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGGDVDTALEI 437
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
M +N + +D +++L+ G+ + G++ A EM+ G+ P TY M+ + K
Sbjct: 438 RKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYTMMMDAFCK 497
Query: 524 KRLGNAK 530
K G+A+
Sbjct: 498 K--GDAQ 502
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 102/413 (24%), Positives = 195/413 (47%), Gaps = 19/413 (4%)
Query: 115 VEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKS 174
V ++GCG +L+++ ++ N +GF+ G+ ++N +++ K
Sbjct: 202 VVPIRGCG-----NLLDRMMKL--NPTGTVWGFYMEI-LDAGFPLNVYVFNILMNKFCKE 253
Query: 175 KKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT 232
C + K DE+ + ++ + +T++ + G D M+K D
Sbjct: 254 GNIC---DAQKVFDEITKRSLRPTVVSFNTLINGYCKVGNLDVGFRLKHHMEKSRTRPDV 310
Query: 233 RALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
S L++ L K N ++ A+++F E + IP + IF LIHG + ++D +++ +
Sbjct: 311 FTYSALINALCKENKMDGAHRLFYEMCERGLIP-NDVIFTTLIHGHSRNGQIDLMKESYQ 369
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
+M +G PD+V Y + +C+ D + + M +G +P +TYT ++ +
Sbjct: 370 KMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKVTYTTLIDGFCRGG 429
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++ AL++ ++M + D +S+LI + K GRV DA +M + G+ P+ +TY
Sbjct: 430 DVDTALEIRKEMDQNGIELDRVGFSALICGMCKEGRVIDAERALREMLRAGMKPDDVTYT 489
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
M+ + C + + + KLL++M+ D P+ TY LL C+ +MK + LL M
Sbjct: 490 MMMDAFCKKGDAQTGFKLLKEMQSDGHIPNVVTYNVLLNGLCKLGQMKNADMLLDAMLNV 549
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
V D TY +L+ G A +++ GIV ++YK L +L +
Sbjct: 550 GVVPDDITYNTLLEGHHRHAN---ASKHYKQKPEIGIVADLASYKSLVNELYR 599
>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 864
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/364 (29%), Positives = 180/364 (49%), Gaps = 7/364 (1%)
Query: 148 FTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRL 207
F + +G+ Y++++ L K L + + M E + V + TI+ L
Sbjct: 147 FDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRM-EADGFVVGMIDYRTIVNAL 205
Query: 208 VRGGRYDDAVEAFR-GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKD--CIP 263
+ G Y +A E F + K G D+ ++ L+ +G ++ A KVF L ++ C P
Sbjct: 206 CKNG-YTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAP 264
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+S ++ILIHG C+ ++++A +M ++G P +YT I+ C K +
Sbjct: 265 -NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNL 323
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
EM +GCKP+V TYT+++ L + +I EA V KM D P Y++LI K
Sbjct: 324 FDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCK 383
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
GRV A E+ M+K+ PNV T+N ++ C + A+ LL++M ++ PD +
Sbjct: 384 DGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVS 443
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y L+ CR+ M V LLT M D+ D T+ +++ + GK ++A +F M+
Sbjct: 444 YNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLML 503
Query: 504 SKGI 507
KGI
Sbjct: 504 RKGI 507
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 185/406 (45%), Gaps = 27/406 (6%)
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCL------------- 179
+L+R ND+ FF W + Y P N ++ ++ S F +
Sbjct: 77 SLQRSDNDI--CVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLFRVAHDVIVALIRECS 134
Query: 180 -----MWELVKEMDELN--NGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
M +L+ DEL +G+ ++ S+++ L + A +R M+ G
Sbjct: 135 RCEKEMLKLISCFDELREVSGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVG 194
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFL--EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+++ L K N A ++F+ K L S I L+ G+C+ + DA K
Sbjct: 195 MIDYRTIVNALCK-NGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVF 253
Query: 290 KEMFQQGF-SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
M ++G +P+ VSY+ I C + +M EKGC+PS TYT+++ AL
Sbjct: 254 DLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD 313
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
I++A ++++M + C P+ Y+ LI L + G++++AN + M K G+ P+V+T
Sbjct: 314 RGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVIT 373
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YN +I+ C A +LL ME+ CKP+ T+ L++ CR + LL M
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
N +S D +Y L+ GL G + +A M S + P T+
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTF 479
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 148/307 (48%), Gaps = 4/307 (1%)
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGV-EKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
+++++ RG DA++ F M + G ++ + S+L+ L + +E A+ + +
Sbjct: 233 VTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQM 292
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K C P S++ + +LI C +D A EM +G P+V +YT I+ CR+
Sbjct: 293 GEKGCQP-STRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGK 351
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + ++M + G PSVITY +++ K ++ A ++ M+ C P+ ++
Sbjct: 352 IEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ L + G+ A + + M G+ P++++YN +I C A KLL M
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFD 471
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+PDC T+ ++ C++ + V + L M + +S+D T +L+ G+ GK A
Sbjct: 472 LEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDAL 531
Query: 497 SFFEEMI 503
E ++
Sbjct: 532 FILETLV 538
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 151/345 (43%), Gaps = 38/345 (11%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T + ++ L R G+ ++A R M K G+ + L++ K V A+++ +
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
E + C P + + FN L+ G C+ K A +K M G SPD+VSY I+ CRE
Sbjct: 398 EKRACKP-NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHAL---GKA------------------------ 349
L M +P +T+T +++A GKA
Sbjct: 457 MNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 350 --------KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+ +AL + E + L + ++ +LSK ++K+ + + K G
Sbjct: 517 LIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLG 576
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+VP+V+TY T++ + + ++L+ M+ C P+ Y ++ C+ R++
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
LL+ M + VS + TY +V+G + +GKL+ A M+ +G
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERG 681
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 149/327 (45%), Gaps = 47/327 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ K + +EL+ M++ ++ T + +M L R G+ AV + M
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEK-RACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSSQIFNILIHGWC 277
G+ D + +VL+D L + + AYK+ DC+ F +I+ +C
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLT-----FTAIINAFC 487
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC---REKDFRKVDDTLKEMQ------ 328
K K D A + M ++G S D V+ T I+ C + +D + +TL +M+
Sbjct: 488 KQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPH 547
Query: 329 ---------EKGCK-----------------PSVITYTIVMHALGKAKQINEALKVYEKM 362
KGCK PSV+TYT ++ L ++ I+ + ++ E M
Sbjct: 548 SLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELM 607
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
K CLP+ Y+ +I L + GRV++A ++ M+ GV PN +TY M+ +
Sbjct: 608 KLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKL 667
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLK 449
+ AL+ ++ M E + + Y+ LL+
Sbjct: 668 DRALETVRAMVERGYELNDRIYSSLLR 694
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 160/384 (41%), Gaps = 37/384 (9%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S T + +++ L G D A F M G + + +VL+D L + +E A V
Sbjct: 300 STRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVC 359
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ KD I S +N LI+G+CK +V A + + M ++ P+V ++ +E CR
Sbjct: 360 RKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRV 419
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
K LK M + G P +++Y +++ L + +N A K+ M S D PD +
Sbjct: 420 GKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTF 479
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ---- 430
+++I K G+ A+ M ++G+ + +T T+I C + +AL +L+
Sbjct: 480 TAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVK 539
Query: 431 ---------------------KMEEDLCK----------PDCETYAPLLKMCCRKKRMKV 459
K++E+L P TY L+ R +
Sbjct: 540 MRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISG 599
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLE 518
+L M + + Y ++ GL + G++E A M G+ P H TY M++
Sbjct: 600 SFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVK 659
Query: 519 EKLEKKRLGNAKERINKLLAHAKE 542
+ +L A E + ++ E
Sbjct: 660 GYVNNGKLDRALETVRAMVERGYE 683
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 75/388 (19%), Positives = 168/388 (43%), Gaps = 59/388 (15%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
+GK++ + E + +M L + +++ I+ L +G + + + + K G+
Sbjct: 524 VGKTRDALFILETLVKMRMLTTPH----SLNVILDMLSKGCKLKEELAMLGKINKLGLVP 579
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
+ L+D L++ + ++++ ++ C+P + + I+I+G C+ +V++A+K
Sbjct: 580 SVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLP-NVYPYTIIINGLCQFGRVEEAEKL 638
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+ M G SP+ V+YT ++ Y + +T++ M E+G + + Y+ ++
Sbjct: 639 LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVL 698
Query: 349 AKQ---------INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+++ I E + V E++ + L+ L K GR ++N + + + K
Sbjct: 699 SQKGIRETDPECIKELISVVEQLGGST----SGLCIFLVTRLCKEGRTDESNGLVQTILK 754
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
GV E A+ ++ E+Y C +KK K
Sbjct: 755 SGVFL------------------EKAIDIIM-----------ESY------CSKKKHTKC 779
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI-SKGIVPYHSTYKMLE 518
+ L+T + K+ ++ +++GL + G E A E++ S G+V +E
Sbjct: 780 VE-LITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNGVVEKSGVLPYVE 838
Query: 519 EKLEKKRLGNAKERINKLLAHAKEQKTF 546
+E + +++L H++E+ TF
Sbjct: 839 CLMETGDCSEVIDLVDQL--HSRERPTF 864
>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
Length = 604
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 164/325 (50%), Gaps = 41/325 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++D + + +ELV++M+ N G ++ T++TI+ L R GR A+E FR
Sbjct: 249 YNCLIDAFCRVGNISMAYELVEKME--NEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE 306
Query: 223 MKKYGVEKDTRAL--SVLMDTLVKGNSVEHAYKVFLE----------------------- 257
+ E A+ S L+ L+ N+V A ++F E
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366
Query: 258 --FKDCIPLSSQI-----------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+D ++S + +NILI G+C+ +++ +A + ++EM + G PDV +Y
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ C+ DF VD+ L +M + GC+PSVIT+ ++H K +I+EAL++ M
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
P+ Y++LI L K G V A E+F++MK++ V NV T+N ++ ++ E
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLK 449
A +L+ +M E+ C PD T L++
Sbjct: 547 AFELMDQMREERCFPDYVTVDVLME 571
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 184/410 (44%), Gaps = 18/410 (4%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
++++ + L RFS+ PA F + +N+++ L + + M +
Sbjct: 103 SAILSKLLARFSSP-EPAARFLAASLAAGAPAPDVFAFNSILAALARVRDVPGMARIYAL 161
Query: 187 MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK--YGVEKDTRALSVLMDTLVK 244
M + + T ++ L + GR DA+ GM + + D L+ ++D L K
Sbjct: 162 MQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCK 221
Query: 245 GNSVEHAYKVFLEFK-----DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
V+ A F+E + C P ++ +N LI +C+ + A + +++M +G
Sbjct: 222 SGRVQEAL-AFVEQRMSSVHGCPP-NTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQ 279
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC-----KPSVITYTIVMHALGKAKQINE 354
++V+ + CR + L+ +EK K + +TY+ ++ AL +
Sbjct: 280 NIVTLNTIVGGLCRAG---RTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGM 336
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A++++ + S+ PD Y ++I L++AGR++DA + MK+ G + YN +I+
Sbjct: 337 AMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIA 396
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C + A +LLQ+M+E +PD TY LL C+ ++ LL M +
Sbjct: 397 GFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQP 456
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
T+ +LV G + GK++ A M GI P + Y L + L K+
Sbjct: 457 SVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKR 506
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 129/277 (46%), Gaps = 4/277 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS-TIMRRLVRGGRYDDAVEAFRG 222
Y+T+V L + + EL E +++ G+ A M T++ L + GR +DA
Sbjct: 321 YSTLVGALLHTNNVGMAMELFHE--KMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASS 378
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
MK+ G + DT+A ++L+ + + AY++ E K+ I +N L+ G CK
Sbjct: 379 MKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGD 438
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ + +M G P V+++ + YC+ + L+ M E G P+ + Y
Sbjct: 439 FAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNT 498
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K ++ A++++++MK + + +++L+ L + A E+ + M+++
Sbjct: 499 LIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREER 558
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
P+ +T + ++ E + + +Q+ E K
Sbjct: 559 CFPDYVTVDVLMEWLPVIGETDRLKRFMQQGEHTASK 595
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 86/195 (44%), Gaps = 4/195 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ + YN ++ + K+ +EL++EM E+ + T +T++ + G +
Sbjct: 381 EAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGI-RPDVCTYNTLLSGSCKAGDF 439
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNIL 272
E M G + L+ K ++ A ++ + I ++ I+N L
Sbjct: 440 AAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTL 499
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF-RKVDDTLKEMQEKG 331
I CK VD A + EM ++ +V ++ ++ R+K+ K + + +M+E+
Sbjct: 500 IDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGL-RDKNMPEKAFELMDQMREER 558
Query: 332 CKPSVITYTIVMHAL 346
C P +T ++M L
Sbjct: 559 CFPDYVTVDVLMEWL 573
>gi|414589415|tpg|DAA39986.1| TPA: empty pericarp 2 [Zea mays]
Length = 455
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/322 (28%), Positives = 148/322 (45%), Gaps = 4/322 (1%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V + ++LS + AL G ++ + LRR N P+ FF +A G
Sbjct: 53 VGALCRVLSDFRGPRHDLRAALSGFAPRLTPAAAAAVLRRCRNLPVPSLRFFLFAAAMPG 112
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ H P+ + L ++ F L+ L + +L +S + R R G +DA
Sbjct: 113 FTHLPDSLLILAGSLAGARLFPLLRSL---LSDLPRSALSRDLFPLLFRAYARAGLPEDA 169
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
+ AF M+++ L L+ TL VEHA F E LS++ + ILI GW
Sbjct: 170 IRAFSSMERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPFQFDLSAKTYTILISGW 229
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE-KGCKPS 335
AQK EM ++G PDV +Y I+ CR D + LK+MQ +G P
Sbjct: 230 AVVASPVKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLKDMQRSRGLAPD 289
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
TY + + +K AL+V ++M++ P+ Y+++I +L + G V +A I
Sbjct: 290 AATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDEAYNILN 349
Query: 396 DMKKQGVVPNVLTYNTMISSAC 417
+M G P+V +YNT++++ C
Sbjct: 350 EMATYGEKPDVWSYNTLLNTHC 371
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 30/226 (13%)
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV---------VSYTCFIEH---Y 311
LS +F +L + + +DA +A M + F P V +S+ +EH +
Sbjct: 148 LSRDLFPLLFRAYARAGLPEDAIRAFSSMERFCFLPTVADLHSLLFTLSHNGLVEHAEAF 207
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
RE F + D + K TYTI++ +A K++++M PD
Sbjct: 208 FRESPF-QFDLSAK------------TYTILISGWAVVASPVKAQKLFDEMIERGVQPDV 254
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKK-QGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y++LI L + G V A E +DM++ +G+ P+ TY + SACA + AL++L
Sbjct: 255 PAYNALIDALCRGGDVALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLD 314
Query: 431 KMEEDLCKPDCETYAPLLKMCCR----KKRMKVLNFLLTHMFKNDV 472
+M P+ TY ++++ C + +LN + T+ K DV
Sbjct: 315 RMRARSLTPNVFTYNAVIRLLCELGEVDEAYNILNEMATYGEKPDV 360
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK---------- 388
+ ++ A +A +A++ + M+ LP + SL+F LS G V+
Sbjct: 153 FPLLFRAYARAGLPEDAIRAFSSMERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRESP 212
Query: 389 ------------------------DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
A ++F++M ++GV P+V YN +I + C +
Sbjct: 213 FQFDLSAKTYTILISGWAVVASPVKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVAL 272
Query: 425 ALKLLQKMEEDL-CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A + L+ M+ PD TY P L+ C K + +L M ++ + TY +++
Sbjct: 273 AQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVI 332
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
R L E G+++ A + EM + G P +Y L
Sbjct: 333 RLLCELGEVDEAYNILNEMATYGEKPDVWSYNTL 366
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 177/359 (49%), Gaps = 10/359 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ L K K+ +++ EM +L G + AT +T++ + R +A E F
Sbjct: 330 YNAILYGLCKIGKYDRAKDVLIEMLQL--GLTPNAATYNTLLVEICRRDNILEAQEIFDE 387
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC----IPLSSQIFNILIHGWCK 278
M + GV D + S L+ L + H Y+ + F++ I + I+ ILI G+C+
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNG---HLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ DA K EM +G DVV+Y F+ C++K F D EM E+G P T
Sbjct: 445 NGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYT 504
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+T ++ K +++AL ++E M + PD Y++LI KAG + A E+++DM
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++ ++P+ ++Y T+++ C+ AL L +M E +P+ T L+K CR M
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L+ M N + D+ +Y +L+ G ++ LE A EM +G+ TY ++
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLI 683
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 167/366 (45%), Gaps = 37/366 (10%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDC 261
++R V+ + + EAF+ +++ GV A + L+ LV+ V+ A++++ E +
Sbjct: 193 LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGG 252
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK------ 315
I L+ NI+++ CK RK ++ + +M +G D+V+Y I YCRE
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312
Query: 316 -----------------------------DFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
+ + D L EM + G P+ TY ++ +
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
+ I EA +++++M LPD +SSLI +L++ G + A F +M++ G+VP+
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+ Y +I C +ALK+ +M C D TY L C+KK + L
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-R 525
M + + D T+ +L+RG + G ++ A + FE M+ + P TY L + K
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552
Query: 526 LGNAKE 531
+G AKE
Sbjct: 553 MGRAKE 558
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 169/367 (46%), Gaps = 6/367 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGR 212
Q G YNT++ + + E+ EM G + L + S+++ L R G
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR--RGVLPDLVSFSSLIGVLARNGH 412
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFN 270
A+ FR M++ G+ D ++L+D + ++ A K+ E + C + +N
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCF-MDVVTYN 471
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
++G CK + DA EM ++G PD ++T I YC++ + K + + M
Sbjct: 472 TFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT 531
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
KP +TY ++ KA ++ A ++++ M D +PD Y +++ +G + +A
Sbjct: 532 NLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEA 591
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ + M ++G+ PN++T NT+I C + A + L KM + PD +Y L+
Sbjct: 592 LNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
++ ++ L+ M K + + TY ++ G GK++ A +MI GI P
Sbjct: 652 YLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPD 711
Query: 511 HSTYKML 517
+TY L
Sbjct: 712 GATYSSL 718
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 150/350 (42%), Gaps = 20/350 (5%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEA-FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
S ++S ++ LVRG R +A R ++K GV + + + L+ T SV Y +
Sbjct: 134 SSXSLSAMVHFLVRGRRLSEAQACILRMVRKSGVSR-VKVVESLISTCFYFGSVGLIYDL 192
Query: 255 FLEF------------------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
+ + + +S N L+ G +T VD A + E+ + G
Sbjct: 193 LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGG 252
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
+V + + C+++ F V L +M+ KG ++TY +++A + + EA
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
++ S P Y+++++ L K G+ A ++ +M + G+ PN TYNT++
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
C R A ++ +M PD +++ L+ + R + M ++ + D
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
Y L+ G +G L A +EM+++G TY L KK++
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 143/349 (40%), Gaps = 76/349 (21%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT ++ L K K F L EM E G V T +T++R + G D A+ F
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVE--RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M + ++ D + L+D K + A +++ + KD IP + +++G+C +
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIP-DHISYGTVLNGFCSSG 586
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ +A +M ++G P++V+ I+ YCR D K + L +M G P +Y
Sbjct: 587 LLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYN 646
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K + +A FIL +M+K+
Sbjct: 647 TLIDGYLKEANLEKA-----------------------FIL------------INEMEKR 671
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ N++TYN +++ CA + + A ++L+KM E PD
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPD-------------------- 711
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
TY+SL+ G + ++ A F +EM+ +G+VP
Sbjct: 712 ---------------GATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YNT++D K+ + EL +M ++ ++S T ++ G +A+
Sbjct: 540 YNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT---VLNGFCSSGLLPEALNLCD 596
Query: 222 GMKKYGVEKDTRALSVLMDTLVKG----NSVEHAYKVFLEF--KDCIPLSSQIFNILIHG 275
M +EK R V +TL+KG + AY+ + IP S +N LI G
Sbjct: 597 QM----LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIP-DSFSYNTLIDG 651
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+ K ++ A + EM ++G ++++Y + +C E ++ + L++M E G P
Sbjct: 652 YLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPD 711
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
TY+ +++ + EA + +++M +PD F
Sbjct: 712 GATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/359 (28%), Positives = 177/359 (49%), Gaps = 10/359 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ L K K+ +++ EM +L G + AT +T++ + R +A E F
Sbjct: 330 YNAILYGLCKIGKYDRAKDVLIEMLQL--GLTPNAATYNTLLVEICRRDNILEAQEIFDE 387
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC----IPLSSQIFNILIHGWCK 278
M + GV D + S L+ L + H Y+ + F++ I + I+ ILI G+C+
Sbjct: 388 MSRRGVLPDLVSFSSLIGVLARNG---HLYQALMHFREMERSGIVPDNVIYTILIDGFCR 444
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ DA K EM +G DVV+Y F+ C++K F D EM E+G P T
Sbjct: 445 NGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYT 504
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+T ++ K +++AL ++E M + PD Y++LI KAG + A E+++DM
Sbjct: 505 FTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMI 564
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++ ++P+ ++Y T+++ C+ AL L +M E +P+ T L+K CR M
Sbjct: 565 RKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMP 624
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L+ M N + D+ +Y +L+ G ++ LE A EM +G+ TY ++
Sbjct: 625 KAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLI 683
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 95/366 (25%), Positives = 167/366 (45%), Gaps = 37/366 (10%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDC 261
++R V+ + + EAF+ +++ GV A + L+ LV+ V+ A++++ E +
Sbjct: 193 LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGG 252
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK------ 315
I L+ NI+++ CK RK ++ + +M +G D+V+Y I YCRE
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312
Query: 316 -----------------------------DFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
+ + D L EM + G P+ TY ++ +
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
+ I EA +++++M LPD +SSLI +L++ G + A F +M++ G+VP+
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+ Y +I C +ALK+ +M C D TY L C+KK + L
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-R 525
M + + D T+ +L+RG + G ++ A + FE M+ + P TY L + K
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552
Query: 526 LGNAKE 531
+G AKE
Sbjct: 553 MGRAKE 558
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 169/367 (46%), Gaps = 6/367 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGR 212
Q G YNT++ + + E+ EM G + L + S+++ L R G
Sbjct: 355 QLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSR--RGVLPDLVSFSSLIGVLARNGH 412
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFN 270
A+ FR M++ G+ D ++L+D + ++ A K+ E + C + +N
Sbjct: 413 LYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCF-MDVVTYN 471
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
++G CK + DA EM ++G PD ++T I YC++ + K + + M
Sbjct: 472 TFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRT 531
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
KP +TY ++ KA ++ A ++++ M D +PD Y +++ +G + +A
Sbjct: 532 NLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEA 591
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ + M ++G+ PN++T NT+I C + A + L KM + PD +Y L+
Sbjct: 592 LNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDG 651
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
++ ++ L+ M K + + TY ++ G GK++ A +MI GI P
Sbjct: 652 YLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPD 711
Query: 511 HSTYKML 517
+TY L
Sbjct: 712 GATYSSL 718
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 78/347 (22%), Positives = 149/347 (42%), Gaps = 20/347 (5%)
Query: 199 TMSTIMRRLVRGGRYDDAVEA-FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
++S ++ LVRG R +A R ++K GV + + + L+ T SV Y + +
Sbjct: 137 SLSAMVHFLVRGRRLSEAQACILRMVRKSGVSR-VKVVESLISTCFYFGSVGLIYDLLVR 195
Query: 258 F------------------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
+ + +S N L+ G +T VD A + E+ + G
Sbjct: 196 TYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIEL 255
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+V + + C+++ F V L +M+ KG ++TY +++A + + EA ++
Sbjct: 256 NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLL 315
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
S P Y+++++ L K G+ A ++ +M + G+ PN TYNT++ C R
Sbjct: 316 NSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEICRR 375
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
A ++ +M PD +++ L+ + R + M ++ + D Y
Sbjct: 376 DNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIY 435
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
L+ G +G L A +EM+++G TY L KK++
Sbjct: 436 TILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKM 482
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 143/349 (40%), Gaps = 76/349 (21%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT ++ L K K F L EM E G V T +T++R + G D A+ F
Sbjct: 470 YNTFLNGLCKKKMFADADMLFNEMVE--RGMVPDFYTFTTLIRGYCKDGNMDKALNLFEA 527
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M + ++ D + L+D K + A +++ + KD IP + +++G+C +
Sbjct: 528 MVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIP-DHISYGTVLNGFCSSG 586
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ +A +M ++G P++V+ I+ YCR D K + L +M G P +Y
Sbjct: 587 LLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYN 646
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K + +A FIL +M+K+
Sbjct: 647 TLIDGYLKEANLEKA-----------------------FIL------------INEMEKR 671
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ N++TYN +++ CA + + A ++L+KM E PD
Sbjct: 672 GLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPD-------------------- 711
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
TY+SL+ G + ++ A F +EM+ +G+VP
Sbjct: 712 ---------------GATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YNT++D K+ + EL +M ++ ++S T ++ G +A+
Sbjct: 540 YNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGT---VLNGFCSSGLLPEALNLCD 596
Query: 222 GMKKYGVEKDTRALSVLMDTLVKG----NSVEHAYKVFLEF--KDCIPLSSQIFNILIHG 275
M +EK R V +TL+KG + AY+ + IP S +N LI G
Sbjct: 597 QM----LEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIP-DSFSYNTLIDG 651
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+ K ++ A + EM ++G ++++Y + +C E ++ + L++M E G P
Sbjct: 652 YLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPD 711
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
TY+ +++ + EA + +++M +PD F
Sbjct: 712 GATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPDDRF 749
>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 669
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 154/313 (49%), Gaps = 2/313 (0%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
++R L R GR DA R + G D A + L+ + ++ A ++ +
Sbjct: 80 LIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMP--V 137
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P + + +I G C +V DA + +M Q+G P VV+YT +E C+ F + +
Sbjct: 138 PPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMN 197
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L EM+ KGC P+++TY ++++ + + ++++A ++ ++ S PD Y++++ L
Sbjct: 198 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLC 257
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
A R D +F +M + VPN +T++ ++ C E A+++LQ+M + C P+
Sbjct: 258 AARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTT 317
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
++ C++ R+ L +M + D +Y +++RGL +G+ E A EM
Sbjct: 318 LCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEM 377
Query: 503 ISKGIVPYHSTYK 515
+ K P T+
Sbjct: 378 VRKNCPPNEVTFN 390
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 178/377 (47%), Gaps = 11/377 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+V + + L+ M + Y T + I+R L GR DA+ M
Sbjct: 112 YNTLVAGYCRYGRLDAARRLIASMPVPPDAY----TYTPIIRGLCDRGRVGDALALLDDM 167
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ G + +VL++ + K + A V E K C P + +N++I+G C+ +
Sbjct: 168 LQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTP-NIVTYNVIINGMCREGR 226
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VDDA++ + + GF PD+VSYT ++ C + + V EM +K C P+ +T+ +
Sbjct: 227 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 286
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + + A++V ++M C P+T+ + +I + K GRV DA + +M G
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYG 346
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+ ++Y T++ C E+A +LL +M C P+ T+ + + C+K ++
Sbjct: 347 CNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAI 406
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ M + S+ TY +LV G G+++ A F + + P TY L L
Sbjct: 407 KLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGL 463
Query: 522 -EKKRLGNAKERINKLL 537
+RL A E + ++
Sbjct: 464 CHAERLDAAAELLAGMI 480
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 157/328 (47%), Gaps = 6/328 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+ ++ + + GR DDA + M YG DT + + ++ L + EHA ++ E
Sbjct: 320 NIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVR 379
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K+C P + FN I C+ ++ A K ++ M + G S +V+Y + +C +
Sbjct: 380 KNCPP-NEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG--- 435
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+VD L+ C+P+ ITYT ++ L A++++ A ++ M DC + ++ L+
Sbjct: 436 RVDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLV 495
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ G V++A E+ M + G PN++T+NT++ E AL+LL +
Sbjct: 496 SFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVS 555
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
D TY+ ++ + R+ R + +L + + G Y ++ L + + + A F
Sbjct: 556 LDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDF 615
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKRL 526
F M+S G +P STY +L E L + L
Sbjct: 616 FAYMVSNGCMPNESTYIILIEGLAHEGL 643
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 178/410 (43%), Gaps = 46/410 (11%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS--LATMSTIMRRLVRGG 211
Q G + Y +++ + KS F E + +DE+ + + T + I+ + R G
Sbjct: 169 QRGCQPSVVTYTVLLEAVCKSSGF---GEAMNVLDEMRAKGCTPNIVTYNVIINGMCREG 225
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLM-------------------------------D 240
R DDA E + YG + D + + ++ D
Sbjct: 226 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 285
Query: 241 TLVK----GNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQ 294
LV+ G VE A +V + C P ++ + NI+I+ CK +VDDA + M
Sbjct: 286 MLVRFFCRGGMVERAIQVLQQMSQHGCTP-NTTLCNIVINAICKQGRVDDAYDFLNNMGM 344
Query: 295 QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
G +PD +SYT + CR + + L EM K C P+ +T+ + L + I +
Sbjct: 345 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 404
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A+K+ E M C Y++L+ GRV A E+F ++ + PN +TY T+++
Sbjct: 405 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLT 461
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C + A +LL M + C + T+ L+ C+K ++ L+ M ++ +
Sbjct: 462 GLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 521
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ T+ +L+ G+ + E A ++SKG+ TY + + L ++
Sbjct: 522 NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRE 571
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 147/311 (47%), Gaps = 7/311 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ L ++ ++ EL+ EM N + T +T + L + G + A++ M
Sbjct: 354 YTTVLRGLCRAGRWEHAKELLPEMVR-KNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 412
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL--SSQIFNILIHGWCKTRK 281
+YG V + LV G V+ LE + +P ++ + L+ G C +
Sbjct: 413 PEYGCSVGI----VTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAER 468
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A + + M Q+ + V++ + +C++ + + + +M E GC P++IT+
Sbjct: 469 LDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNT 528
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + K EAL++ + S DT YSS++ +LS+ R ++A ++ ++ G
Sbjct: 529 LLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMG 588
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P V YN ++ + C R E + A+ M + C P+ TY L++ + +K
Sbjct: 589 MRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAR 648
Query: 462 FLLTHMFKNDV 472
++L+ ++ V
Sbjct: 649 YVLSELYAKGV 659
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 113/238 (47%), Gaps = 11/238 (4%)
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+A + ++ +G +PDV T I + CR L+ + G V Y ++
Sbjct: 57 EAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLV 116
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ +++ A ++ M PD Y+ +I L GRV DA + +DM ++G
Sbjct: 117 AGYCRYGRLDAARRLIASMPVP---PDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQ 173
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM----KV 459
P+V+TY ++ + C S A+ +L +M C P+ TY ++ CR+ R+ ++
Sbjct: 174 PSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEI 233
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LN L ++ F+ D+ +Y ++++GL + + + F EM+ K VP T+ ML
Sbjct: 234 LNRLSSYGFQPDIV----SYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDML 287
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 124/280 (44%), Gaps = 23/280 (8%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM 187
L+EQ ++ +L P +G T YN +V FC+ + +
Sbjct: 400 GLIEQAIKLI--ELMPEYGCSVGIVT----------YNALV------HGFCVQGRVDSAL 441
Query: 188 DELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
+ NN + T +T++ L R D A E GM + + +VL+ +
Sbjct: 442 ELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQK 501
Query: 246 NSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
VE A ++ + + C P + FN L+ G K ++A + + + +G S D ++
Sbjct: 502 GFVEEAMELVNQMMEHGCTP-NLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTIT 560
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y+ ++ RE + L +Q+ G +P V Y ++ AL K + ++A+ + M
Sbjct: 561 YSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMV 620
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
S+ C+P+ S Y LI L+ G +K+A + ++ +GV+
Sbjct: 621 SNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 660
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 4/190 (2%)
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+ EA ++ E S PD + LI L + GR DA + + G +V YNT
Sbjct: 55 LAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNT 114
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+++ C + A +L+ M PD TY P+++ C + R+ LL M +
Sbjct: 115 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRG 171
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAK 530
TY L+ + +S A + +EM +KG P TY ++ + + R+ +AK
Sbjct: 172 CQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAK 231
Query: 531 ERINKLLAHA 540
E +N+L ++
Sbjct: 232 EILNRLSSYG 241
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 184/378 (48%), Gaps = 10/378 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ L K + L+K+M+E ++ T ST++ L R ++A++ F M
Sbjct: 201 YNTIINGLCKIGETAAAAGLLKKMEE-AGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYM 259
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
K G+ D + L+ L K + + A + E + + FN+L+ +CK KV
Sbjct: 260 KAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKV 319
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A +K M + G P+VV+Y+ + Y D + M KGCKP++ +Y I+
Sbjct: 320 SEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNIL 379
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ KAK+I+EA++++ +M P+ Y++LI + G++++A ++F +M G
Sbjct: 380 INGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGN 439
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+P++ TY+ ++ C + A +L + M+ KP+ Y L+ C+ K
Sbjct: 440 LPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARK 499
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-----ML 517
L + +F + Y +++ GL + G L+ A F M + G P +Y +L
Sbjct: 500 LFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLL 559
Query: 518 EEKLEKKRL---GNAKER 532
+ K E + L G ++R
Sbjct: 560 QHKDESRALLLVGEMRDR 577
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 176/385 (45%), Gaps = 5/385 (1%)
Query: 145 FGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
GF AK + G T + T+++ L K +F EL +M + T +TI
Sbjct: 146 LGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVA-KGCQPDVYTYNTI 204
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
+ L + G A + M++ G + + S L+D+L + V A +F +
Sbjct: 205 INGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIF-SYMKAKG 263
Query: 264 LSSQIFNI--LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+S IF LI G CK + +A + EM PD+V++ ++ +C+E +
Sbjct: 264 ISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEAL 323
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
LK M E G +P+V+TY+ +M+ + EA K++ M + C P+ Y+ LI
Sbjct: 324 GVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGY 383
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
KA R+ +A ++F +M QG+ PN ++YNT+I C + A L + M + PD
Sbjct: 384 CKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDL 443
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY+ LL C++ + L M + + Y LV + +SG + A F E
Sbjct: 444 FTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSE 503
Query: 502 MISKGIVPYHSTYKMLEEKLEKKRL 526
+ +G+ P+ Y + L K+ L
Sbjct: 504 LFVQGLQPHVQLYTTIINGLCKEGL 528
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 171/368 (46%), Gaps = 44/368 (11%)
Query: 203 IMRRLVRGGRYDDAVEAF-RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
++ +V+ G+Y D V + + M+ G+ + LS+ M+ + V+ + V +
Sbjct: 98 LLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQRVDLGFSVLAKV--- 154
Query: 262 IPLSSQ----IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
I L Q F LI+G CK + A + +M +G PDV +Y I C+ +
Sbjct: 155 IKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGET 214
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
LK+M+E GC+P+++TY+ ++ +L + + +NEAL ++ MK+ PD Y+SL
Sbjct: 215 AAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSL 274
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE--- 434
I L K R K+A+ + +M ++P+++T+N ++ + C + AL +L+ M E
Sbjct: 275 IQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGV 334
Query: 435 ------------------DL--------------CKPDCETYAPLLKMCCRKKRMKVLNF 462
D+ CKP+ +Y L+ C+ KR+
Sbjct: 335 EPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQ 394
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L M ++ + +Y +L+ G + GKL A F M + G +P TY +L +
Sbjct: 395 LFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFC 454
Query: 523 KKR-LGNA 529
K+ LG A
Sbjct: 455 KQGYLGKA 462
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 3/258 (1%)
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL-KEMQEKGCKPSVIT 338
R +DDA + M + P ++ + + + + V +L K+M+ G P++ T
Sbjct: 71 RNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYT 130
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+I M+ + ++++ V K+ P +++LI L K G A E+F+DM
Sbjct: 131 LSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMV 190
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+G P+V TYNT+I+ C E A LL+KMEE C+P+ TY+ L+ CR + +
Sbjct: 191 AKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVN 250
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
+ ++M +S D TY SL++GL + + + A + EM S I+P T+ +L
Sbjct: 251 EALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLV 310
Query: 519 EKLEKKRLGNAKERINKL 536
+ K+ G E + L
Sbjct: 311 DTFCKE--GKVSEALGVL 326
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 145/298 (48%), Gaps = 11/298 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA---F 220
+N +VD K K ++K M E+ ++ T S++M + D VEA F
Sbjct: 306 FNVLVDTFCKEGKVSEALGVLKTMTEMGV-EPNVVTYSSLMYGY---SLWTDVVEARKLF 361
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKT 279
M G + + + ++L++ K ++ A ++F E + ++ +N LIHG+C+
Sbjct: 362 HVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQL 421
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
K+ +AQ + M G PD+ +Y+ ++ +C++ K + MQ KP+++ Y
Sbjct: 422 GKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMY 481
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
TI++HA+ K+ +A K++ ++ P Y+++I L K G + +A E F +M+
Sbjct: 482 TILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEA 541
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
G P+ ++YN +I +E AL L+ +M + D P L C+ K++
Sbjct: 542 DGCPPDEISYNVIIRGLLQHKDESRALLLVGEMRDRGFIADVR---PCLSEVCQGKKV 596
>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
Length = 736
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 172/383 (44%), Gaps = 54/383 (14%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
N ++ ++ R L G++D A + + M + G DT S ++ L VE A
Sbjct: 183 NCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA 242
Query: 252 YKVFLEFKDCIPLSSQIFN--ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+ +F E K + ++ ++ ILI +CK ++ AQ +EM G SP VV+YT I
Sbjct: 243 FLLFQEMK-MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 301
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK-------- 361
Y + K + +D M + GC+P+ +TY ++ L KA I++A +VY K
Sbjct: 302 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 361
Query: 362 -------------------------------------------MKSDDCLPDTSFYSSLI 378
M S C P+ Y +LI
Sbjct: 362 DSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALI 421
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
KAG++ A E+F M K G +P+V TY ++I + A+K+L +M +D C
Sbjct: 422 DGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCT 481
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P+ TY ++ CR + LL+ M + S + TY +L+ GL ++GK++L+
Sbjct: 482 PNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDL 541
Query: 499 FEEMISKGIVPYHSTYKMLEEKL 521
F +M KG P + TY++L L
Sbjct: 542 FTQMSRKGCSPNYVTYRVLINHL 564
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 161/381 (42%), Gaps = 57/381 (14%)
Query: 176 KFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRA 234
KF ++L+KEM + G+V +T S ++ L + + A F+ MK GV D
Sbjct: 203 KFDKAFQLIKEM--MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 260
Query: 235 LSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
++L+D+ K +E A +F E + C P + + LIH + K ++V A M
Sbjct: 261 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSP-TVVTYTALIHAYLKAKQVPQANDIFHRM 319
Query: 293 FQQGFSPDVVSYTCFIEHYCR---------------------EKDF-------------- 317
G P+ V+Y ++ C+ + DF
Sbjct: 320 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 379
Query: 318 -------------RKVD---DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
KVD + L M GC+P+ I Y ++ KA +I+ A +V+ +
Sbjct: 380 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 439
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M LP Y+SLI + K GR+ A ++ M K PNV+TY MI C E
Sbjct: 440 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 499
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
E ALKLL MEE C P+ TY L+ + ++ + L T M + S + TY
Sbjct: 500 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 559
Query: 482 LVRGLIESGKLELACSFFEEM 502
L+ L +G L+ A EM
Sbjct: 560 LINHLCAAGLLDKARLLLGEM 580
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 169/376 (44%), Gaps = 20/376 (5%)
Query: 164 YNTMVDVLGK----SKKFCLMWELVKEMDELNNGYV-----------SLATMSTIMRRLV 208
Y +VD L K SK F + +L+ D ++ + ++ T ++ L
Sbjct: 331 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 390
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS-Q 267
+ + D A E M G E + L+D K ++ A +VFL+ C L S
Sbjct: 391 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 450
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+ LI K ++D A K + +M + +P+VV+YT I+ CR + K L M
Sbjct: 451 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 510
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+EKGC P+V+TYT ++ LGKA +I+ +L ++ +M C P+ Y LI L AG +
Sbjct: 511 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 570
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A + +MK+ + Y I +L +L++ME P Y L
Sbjct: 571 DKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGML 628
Query: 448 LKMCCRKKRMKVLNFLLTHMFK--NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
+ + R+++ L M + + V D YASL++ L + ++E A + EM +
Sbjct: 629 IDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 688
Query: 506 GIVPYHSTYKMLEEKL 521
G VP S + L + L
Sbjct: 689 GFVPELSVFVCLIKGL 704
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 17/278 (6%)
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
C K D A + +KEM ++GF PD +Y+ I C K +EM+ G P V
Sbjct: 199 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 258
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TYTI++ + KA I +A ++E+M+S C P Y++LI KA +V AN+IF
Sbjct: 259 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 318
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM----------------EEDLCKPD 440
M G PN +TY ++ C A ++ K+ + P+
Sbjct: 319 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 378
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ C+ ++ + LL M + + Y +L+ G ++GK++ A F
Sbjct: 379 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 438
Query: 501 EMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLL 537
+M G +P TY L +++ K RL A + ++++L
Sbjct: 439 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 476
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/349 (22%), Positives = 159/349 (45%), Gaps = 13/349 (3%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T+ L + GR+ DA++ +++ + DT + ++ L++ + + A +
Sbjct: 12 TVGCFAHALCKEGRWADALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRM 68
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
CIP + + L+ G+ K +++ ++ + M +G +P+ + + YC EKD
Sbjct: 69 RCNSCIP-NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKD 127
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHAL-GKAKQ-----INEALKVYEKMKSDDCLPD 370
+ L M GC P + Y I + ++ G+ K ++ A K+Y +M + +C+ +
Sbjct: 128 YAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLN 187
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
++ L G+ A ++ ++M ++G VP+ TY+ +I+ C ++ E A L Q
Sbjct: 188 KVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQ 247
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
+M+ PD TY L+ C+ ++ +L M S TY +L+ +++
Sbjct: 248 EMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAK 307
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLA 538
++ A F M+ G P TY L + L K + A E KL+
Sbjct: 308 QVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 356
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 136/306 (44%), Gaps = 24/306 (7%)
Query: 250 HAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKV------DDAQKAMKEMFQQGFSPDVV 302
+AYK+ C P ++NI I C K+ D A+K EM + V
Sbjct: 130 YAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKV 189
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+ F C F K +KEM KG P TY+ V+ L A ++ +A ++++M
Sbjct: 190 NVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 249
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
K PD Y+ LI KAG ++ A +FE+M+ G P V+TY +I + +
Sbjct: 250 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 309
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM--------KVL--------NFLLTH 466
A + +M + C+P+ TY L+ C+ + K++ +F
Sbjct: 310 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 369
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-R 525
++ ++ + TY +LV GL ++ K++ A + M+S G P H Y L + K +
Sbjct: 370 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 429
Query: 526 LGNAKE 531
+ +A+E
Sbjct: 430 IDSAQE 435
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 135/280 (48%), Gaps = 8/280 (2%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
T+ GY+ + Y +++D + K + L +++ +M + ++ ++ T + ++ L R G
Sbjct: 441 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK-DSCTPNVVTYTAMIDGLCRIGE 499
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFN 270
+ A++ M++ G + + L+D L K ++ + +F + K C P + +
Sbjct: 500 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP-NYVTYR 558
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+LI+ C +D A+ + EM Q + + Y C I+ + K F L+EM+
Sbjct: 559 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESY 616
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKS--DDCLPDTSFYSSLIFILSKAGRVK 388
G P Y +++ KA ++ A++++++M D Y+SLI L A +V+
Sbjct: 617 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVE 676
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
+A ++ +M ++G VP + + +I + + AL+L
Sbjct: 677 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 98/229 (42%), Gaps = 9/229 (3%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M + GF D + CF C+E + D L ++ + K + T ++ L +A
Sbjct: 1 MSESGFCMDRFTVGCFAHALCKEGRWA---DALDMIEREDFKLDTVLCTHMISGLMEASY 57
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+EA+ +M+ + C+P+ Y +L+ K ++ I M +G PN +N+
Sbjct: 58 FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL------LT 465
++ S C + A KLL +M C P Y + C ++++ + L
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
M + ++ A+ R L GK + A +EM+ KG VP STY
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTY 226
>gi|242084242|ref|XP_002442546.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
gi|241943239|gb|EES16384.1| hypothetical protein SORBIDRAFT_08g021630 [Sorghum bicolor]
Length = 735
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/384 (26%), Positives = 179/384 (46%), Gaps = 6/384 (1%)
Query: 145 FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTI 203
F FF WA Q Y H PE+++ M+ +L +++ +++ M + G + +
Sbjct: 110 FEFFRWADRQWKYRHAPEVFDEMLVLLSRTRLHDPARRVMRLM--IRRGMPRGTRQFAHL 167
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
M R G+ A+ + M+K G D ++ ++ LV ++ A + F E +
Sbjct: 168 MLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNMAVNVLVVAGRIDKALE-FAERMRRVG 226
Query: 264 LSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ + +N LI G C R++ DA + + M Q G PD +SY + C+EK V
Sbjct: 227 VDPDVVTYNCLIKGLCGARRIVDALEMISSMLQNGCLPDKISYFTVMSFLCKEKRVADVQ 286
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ L+ M + G P +TY +++H L K +EAL + + D YS+ +
Sbjct: 287 NLLERMSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSF 346
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
GR+ +A EI +M +G P+V+TY+ ++ C E + A K+++ M ++ CKP+
Sbjct: 347 CLNGRMAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNT 406
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
T+ LL C+ + LL + + A TY+ ++ G GKL+ +C +
Sbjct: 407 VTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQ 466
Query: 502 MISKGIVPYHSTYKMLEEKLEKKR 525
M+ KG P +L L +R
Sbjct: 467 MLQKGFFPTTVEINLLIHALCNER 490
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 180/378 (47%), Gaps = 5/378 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ L +++ E++ M L NG + + T+M L + R D
Sbjct: 234 YNCLIKGLCGARRIVDALEMISSM--LQNGCLPDKISYFTVMSFLCKEKRVADVQNLLER 291
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRK 281
M G+ D ++L+ L K + A E + ++ ++ +H +C +
Sbjct: 292 MSDAGIFPDQVTYNMLIHGLAKHGHADEALSFLRESEGKRFRVDEVGYSATVHSFCLNGR 351
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A++ + EM +G PDVV+Y+ ++ +CR + + +K M + GCKP+ +T+T
Sbjct: 352 MAEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTA 411
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ L K + +EA ++ K + + P YS ++ + G++K++ ++ M ++G
Sbjct: 412 LLNGLCKVGKSSEAWELLNKSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKG 471
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P + N +I + C + +A +++ + C + + ++ R+ ++
Sbjct: 472 FFPTTVEINLLIHALCNERKPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESAL 531
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEK 520
LL M+ + D TY +V L GK++ A S E+M+++G+ P TY+ ++
Sbjct: 532 SLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRY 591
Query: 521 LEKKRLGNAKERINKLLA 538
EK + + ++K+LA
Sbjct: 592 CEKGAVEDLLNLLDKMLA 609
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 176/393 (44%), Gaps = 7/393 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
Q G + Y T++ L K K+ + L++ M + + T + ++ L + G
Sbjct: 259 QNGCLPDKISYFTVMSFLCKEKRVADVQNLLERMSDAGI-FPDQVTYNMLIHGLAKHGHA 317
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNI 271
D+A+ R + D S + + + A ++ E K C P ++
Sbjct: 318 DEALSFLRESEGKRFRVDEVGYSATVHSFCLNGRMAEAKEIIGEMISKGCRP-DVVTYSA 376
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++ G+C+ ++D A+K MK M++ G P+ V++T + C+ + + L + +E+
Sbjct: 377 VVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEW 436
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
PS ITY++VMH + ++ E+ V +M P T + LI L + DA
Sbjct: 437 WTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNERKPADAK 496
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ E + +G NV+ + T+I + + E+AL LL M PD TY ++
Sbjct: 497 DFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDAL 556
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
RK +MK L+ M + TY +++ E G +E + ++M++K +
Sbjct: 557 GRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAKE--GFS 614
Query: 512 STYKMLEEKL-EKKRLGNAKERINKLLAHAKEQ 543
S Y + EKL +L A ++K+L A ++
Sbjct: 615 SAYNQVIEKLCAFGKLSEANNLLSKVLRTASKR 647
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 121/281 (43%), Gaps = 34/281 (12%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T S ++ R G D A + + M K G + +T + L++ L K A+++
Sbjct: 371 VVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLN 430
Query: 257 EFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ ++ S I +++++HG+ + K+ ++ + +M Q+GF P V I C E+
Sbjct: 431 KSEEEWWTPSAITYSVVMHGFRREGKLKESCDVVMQMLQKGFFPTTVEINLLIHALCNER 490
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
D +++ Q KGC +V+ +T V+H + + AL + + M + PD Y+
Sbjct: 491 KPADAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYT 550
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY-------------------------- 409
++ L + G++K+A + E M +G+ P +TY
Sbjct: 551 VVVDALGRKGKMKEATSLVEKMLNRGLHPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLAK 610
Query: 410 -------NTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
N +I CA + A LL K+ K D +T
Sbjct: 611 EGFSSAYNQVIEKLCAFGKLSEANNLLSKVLRTASKRDAQT 651
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 158/303 (52%), Gaps = 1/303 (0%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
M + G+ VL++ K ++ A +VF E K I S +N LI G C K
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V++ K M+EM G SP+ +++ C ++ +C++ +D + M E+ +P V+ YTI
Sbjct: 315 VEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTI 374
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + ++ +A+ V E M P+ + Y+ LI S++G + A+ + ++MK++G
Sbjct: 375 LIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ +V+TYN +I + C + E A+KLL +M E +P+ TY +++ C K +K
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ T M K + TY ++ + GK++ A EM+ K +VP TY+ ++E +
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Query: 522 EKK 524
+K
Sbjct: 555 MEK 557
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 148/326 (45%), Gaps = 4/326 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S ++++ ++ LV R D A +AFR + V D + ++ L + + A V
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214
Query: 256 LEFKD-CIPLSSQIFNILIHGWCKTRKVDD---AQKAMKEMFQQGFSPDVVSYTCFIEHY 311
+ K + S +N LI G+CK + +KEM + G SP V++ I Y
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C+ + +EM+++G SV+TY ++ L ++ E +K+ E+M+ P+
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
+ ++ K G + DAN+ + M ++ V P+V+ Y +I + E+A+ + +
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEA 394
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M + P+ TY L+ R + + LL M + + D TY L+ L G+
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454
Query: 492 LELACSFFEEMISKGIVPYHSTYKML 517
+ A +EM G+ P H TY +
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTI 480
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 4/208 (1%)
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+PS + ++ L AK+++ A K + PD ++++I L + G+++ A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALK---LLQKMEEDLCKPDCETYAPLLK 449
+ +D+K G+ P+V TYN++I C + N LL++M E P T+ L+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ + M + ++ TY SL+ GL GK+E EEM G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 510 YHSTYK-MLEEKLEKKRLGNAKERINKL 536
T+ +L+ +K + +A + I+ +
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGM 360
>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
Length = 801
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/383 (27%), Positives = 172/383 (44%), Gaps = 54/383 (14%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
N ++ ++ R L G++D A + + M + G DT S ++ L VE A
Sbjct: 248 NCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKA 307
Query: 252 YKVFLEFKDCIPLSSQIFN--ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+ +F E K + ++ ++ ILI +CK ++ AQ +EM G SP VV+YT I
Sbjct: 308 FLLFQEMK-MVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIH 366
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK-------- 361
Y + K + +D M + GC+P+ +TY ++ L KA I++A +VY K
Sbjct: 367 AYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSA 426
Query: 362 -------------------------------------------MKSDDCLPDTSFYSSLI 378
M S C P+ Y +LI
Sbjct: 427 DSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALI 486
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
KAG++ A E+F M K G +P+V TY ++I + A+K+L +M +D C
Sbjct: 487 DGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCT 546
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P+ TY ++ CR + LL+ M + S + TY +L+ GL ++GK++L+
Sbjct: 547 PNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDL 606
Query: 499 FEEMISKGIVPYHSTYKMLEEKL 521
F +M KG P + TY++L L
Sbjct: 607 FTQMSRKGCSPNYVTYRVLINHL 629
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/381 (27%), Positives = 161/381 (42%), Gaps = 57/381 (14%)
Query: 176 KFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRA 234
KF ++L+KEM + G+V +T S ++ L + + A F+ MK GV D
Sbjct: 268 KFDKAFQLIKEM--MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325
Query: 235 LSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
++L+D+ K +E A +F E + C P + + LIH + K ++V A M
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSP-TVVTYTALIHAYLKAKQVPQANDIFHRM 384
Query: 293 FQQGFSPDVVSYTCFIEHYCR---------------------EKDF-------------- 317
G P+ V+Y ++ C+ + DF
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444
Query: 318 -------------RKVD---DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
KVD + L M GC+P+ I Y ++ KA +I+ A +V+ +
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M LP Y+SLI + K GR+ A ++ M K PNV+TY MI C E
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
E ALKLL MEE C P+ TY L+ + ++ + L T M + S + TY
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624
Query: 482 LVRGLIESGKLELACSFFEEM 502
L+ L +G L+ A EM
Sbjct: 625 LINHLCAAGLLDKARLLLGEM 645
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 169/376 (44%), Gaps = 20/376 (5%)
Query: 164 YNTMVDVLGK----SKKFCLMWELVKEMDELNNGYV-----------SLATMSTIMRRLV 208
Y +VD L K SK F + +L+ D ++ + ++ T ++ L
Sbjct: 396 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 455
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS-Q 267
+ + D A E M G E + L+D K ++ A +VFL+ C L S
Sbjct: 456 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 515
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+ LI K ++D A K + +M + +P+VV+YT I+ CR + K L M
Sbjct: 516 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 575
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+EKGC P+V+TYT ++ LGKA +I+ +L ++ +M C P+ Y LI L AG +
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 635
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A + +MK+ + Y I +L +L++ME P Y L
Sbjct: 636 DKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGML 693
Query: 448 LKMCCRKKRMKVLNFLLTHMFK--NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
+ + R+++ L M + + V D YASL++ L + ++E A + EM +
Sbjct: 694 IDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 753
Query: 506 GIVPYHSTYKMLEEKL 521
G VP S + L + L
Sbjct: 754 GFVPELSVFVCLIKGL 769
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 181/393 (46%), Gaps = 16/393 (4%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
GY + YN +V VL + + L + + KEM E +G+ + T+ L + GR+
Sbjct: 35 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSE--SGFCMDRFTVGCFAHALCKEGRWA 92
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
DA++ +++ + DT + ++ L++ + + A + CIP + + L
Sbjct: 93 DALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP-NVVTYRTL 148
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+ G+ K +++ ++ + M +G +P+ + + YC EKD+ L M GC
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208
Query: 333 KPSVITYTIVMHAL-GKAKQ-----INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
P + Y I + ++ G+ K ++ A K+Y +M + +C+ + ++ L G+
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 268
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
A ++ ++M ++G VP+ TY+ +I+ C ++ E A L Q+M+ PD TY
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+ C+ ++ +L M S TY +L+ +++ ++ A F M+ G
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388
Query: 507 IVPYHSTYKMLEEKLEKK-RLGNAKERINKLLA 538
P TY L + L K + A E KL+
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 421
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 17/278 (6%)
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
C K D A + +KEM ++GF PD +Y+ I C K +EM+ G P V
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TYTI++ + KA I +A ++E+M+S C P Y++LI KA +V AN+IF
Sbjct: 324 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 383
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM----------------EEDLCKPD 440
M G PN +TY ++ C A ++ K+ + P+
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ C+ ++ + LL M + + Y +L+ G ++GK++ A F
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 501 EMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLL 537
+M G +P TY L +++ K RL A + ++++L
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 131/306 (42%), Gaps = 24/306 (7%)
Query: 250 HAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKV------DDAQKAMKEMFQQGFSPDVV 302
+AYK+ C P ++NI I C K+ D A+K EM + V
Sbjct: 195 YAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKV 254
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+ F C F K +KEM KG P TY+ V+ L A ++ +A ++++M
Sbjct: 255 NVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 314
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
K PD Y+ LI KAG ++ A +FE+M+ G P V+TY +I + +
Sbjct: 315 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG----- 477
A + +M + C+P+ TY L+ C+ + + + S D+
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 434
Query: 478 -----------TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-R 525
TY +LV GL ++ K++ A + M+S G P H Y L + K +
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494
Query: 526 LGNAKE 531
+ +A+E
Sbjct: 495 IDSAQE 500
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 135/280 (48%), Gaps = 8/280 (2%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
T+ GY+ + Y +++D + K + L +++ +M + ++ ++ T + ++ L R G
Sbjct: 506 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK-DSCTPNVVTYTAMIDGLCRIGE 564
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFN 270
+ A++ M++ G + + L+D L K ++ + +F + K C P + +
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP-NYVTYR 623
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+LI+ C +D A+ + EM Q + + Y C I+ + K F L+EM+
Sbjct: 624 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESY 681
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKS--DDCLPDTSFYSSLIFILSKAGRVK 388
G P Y +++ KA ++ A++++++M D Y+SLI L A +V+
Sbjct: 682 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVE 741
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
+A ++ +M ++G VP + + +I + + AL+L
Sbjct: 742 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 9/218 (4%)
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D+ +++ G +PS +TY ++ L A Q++ +V ++M D L
Sbjct: 26 DSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHAL 85
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K GR DA ++ E ++ + + MIS S + A+ L +M + C P+
Sbjct: 86 CKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNV 142
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY LL +KK++ ++ M + + + SLV A
Sbjct: 143 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 202
Query: 502 MISKGIVPYHSTYKML------EEKLEKKRLGNAKERI 533
M + G P + Y + +EKL L + E+I
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 240
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 182/372 (48%), Gaps = 4/372 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMD-ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y T+++ L K + +L+K +D +L + M I+ + + +DA + +
Sbjct: 169 YGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNM--IIDNMCKAKLVNDAFDLYSQ 226
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRK 281
M + D + L+ + + +A +F + K + I + FNIL+ G+CK K
Sbjct: 227 MVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGK 286
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V+DA+ + M + PDVV+Y ++ YC K D M G +V YT
Sbjct: 287 VNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTT 346
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ K K ++EA+ ++E+M+ +P+ YSSLI L K GR+ A ++ ++M +G
Sbjct: 347 MVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRG 406
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PN++TY++++ + C + A+ LL +++ +PD TY L+K C+ R++
Sbjct: 407 QPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQ 466
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ + ++D Y +++G + G + A + +M G +P TY+++ L
Sbjct: 467 NVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSL 526
Query: 522 EKKRLGNAKERI 533
+K + E++
Sbjct: 527 FEKDENDTAEKL 538
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 148/322 (45%), Gaps = 1/322 (0%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDC 261
I+ LV+ + A+ + M+ G+E D ++L++ + ++ +F + K
Sbjct: 67 ILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGLNSLSFSIFAKILKKG 126
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
++ FN LI G C + A ++ QGF D VSY I C+
Sbjct: 127 YHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAAL 186
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
LK + K +P+ + Y +++ + KAK +N+A +Y +M + PD Y++LI
Sbjct: 187 QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGF 246
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
S ++ A ++F MKK+ + PNV T+N ++ C + +A +L M +D KPD
Sbjct: 247 SAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDV 306
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ C ++ + M V + Y ++V G + ++ A + FEE
Sbjct: 307 VTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEE 366
Query: 502 MISKGIVPYHSTYKMLEEKLEK 523
M + I+P TY L + L K
Sbjct: 367 MRCRKIIPNVVTYSSLIDGLCK 388
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 36/240 (15%)
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
+ K P + ++ +L KAK + AL ++++M+ + D ++ LI S+ G
Sbjct: 52 LLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINCFSQLGL 111
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN---------------------- 424
+ IF + K+G P +T+NT+I C +
Sbjct: 112 NSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGT 171
Query: 425 -------------ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
AL+LL++++ L +P+ Y ++ C+ K + L + M
Sbjct: 172 LINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKR 231
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAK 530
+ D TY +L+ G KL A F +M + I P T+ +L + K+ ++ +AK
Sbjct: 232 ICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAK 291
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 179/371 (48%), Gaps = 21/371 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN+++ L K KK L+ +M + +G + ++ T +T+++ +D+A F
Sbjct: 500 YNSLMYGLVKDKKLHKAMALLTKMQK--DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEM 557
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
M++ G++ D A +VL D L K E AY + + + L+ + LI G+ K
Sbjct: 558 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV--RKGVALTKVYYTTLIDGFSKAGNT 615
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D A ++ M +G +PD +Y+ + C++K + L +M +G K ++ YTI+
Sbjct: 616 DFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTIL 675
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ + + + + A ++Y +M S P + Y+ I K GR++DA ++ M+++GV
Sbjct: 676 IDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGV 735
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+V+TYN +I + A L++M C+P+ TY LLK + V +
Sbjct: 736 APDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSV 795
Query: 463 ----------------LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
LL M K+ ++ TY+SL+ G ++G+LE AC + M KG
Sbjct: 796 DTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKG 855
Query: 507 IVPYHSTYKML 517
+ P Y +L
Sbjct: 856 LSPNEDIYTLL 866
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 116/448 (25%), Positives = 209/448 (46%), Gaps = 21/448 (4%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPA--FGFFTWAKTQ 154
V ++ +ILS + + + A K SV+ + V R S PA FF W +
Sbjct: 27 VAELGRILSTRRWNKGR---AYKRLAPSVTAAHVADLFRAESTAPEPATALAFFEWLARR 83
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G+ HT + + ++ +L + + LV M ++ + + MR
Sbjct: 84 DGFRHTADSHAALLHLLSRRRAPAQYERLVVSM-------LNCSDTAEDMRVSA------ 130
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILI 273
DA++A R + + + + +L + + E+ +V+ + +D + + +N +I
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+CK + A + + + + G P+ + + YCR + RK M GC+
Sbjct: 191 KSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+ +YTI++ L +AK + EAL ++ MK D C P+ ++ LI L K+GRV DA +
Sbjct: 251 RNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
F+ M + GVVP+V+TYN MI +ALK+ + ME++ C PD TY L+ C
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD 370
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI-SKGIVPYHS 512
+K + LL + K + T+ +L+ G + K + A +M+ SK +
Sbjct: 371 QKTEEA-EELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429
Query: 513 TYKMLEEKLEKKRLGNAKERINKLLAHA 540
K++ ++K RL AKE +N++ A+
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANG 457
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 176/366 (48%), Gaps = 45/366 (12%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKD 260
++ L + GR DA F M + GV + ++ K + A K+ +E
Sbjct: 294 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 353
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR-- 318
C P +N LI+G C +K ++A++ + ++GF+P VV++T I YC + F
Sbjct: 354 CHP-DDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDA 411
Query: 319 ------------KVD--------------DTLKEMQE-------KGCKPSVITYTIVMHA 345
K+D D LKE +E G P+VITYT ++
Sbjct: 412 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDG 471
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K+ +++ AL+V + M+ D C P+ Y+SL++ L K ++ A + M+K G++PN
Sbjct: 472 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 531
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-KVLNFLL 464
V+TY T++ C + +NA +L + ME++ KPD YA L C+ R + +F++
Sbjct: 532 VITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV 591
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EK 523
+ V++ Y +L+ G ++G + A + E MI +G P TY +L L ++
Sbjct: 592 ----RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQ 647
Query: 524 KRLGNA 529
KRL A
Sbjct: 648 KRLNEA 653
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 188/381 (49%), Gaps = 21/381 (5%)
Query: 161 PEMYNTMVDVLG-----KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
PE + VLG + +K C ++ ++ M N Y + + +++ L +
Sbjct: 216 PETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEY----SYTILIQGLCEAKCVRE 271
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-----FN 270
A+ F MK+ G + RA + L+ L K V A +F D +P + + +N
Sbjct: 272 ALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF----DAMPQNGVVPSVMTYN 327
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+I G+ K +++DA K + M + G PD +Y I C +K + ++ L ++
Sbjct: 328 AMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAVKE 386
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P+V+T+T +++ A++ ++AL++ KM S C D + LI L K R+K+A
Sbjct: 387 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 446
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+ ++ G+VPNV+TY ++I C + + AL++L+ ME D C+P+ TY L+
Sbjct: 447 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 506
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
+ K++ LLT M K+ + + TY +L++G + + A FE M G+ P
Sbjct: 507 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 566
Query: 511 HSTYKMLEEKLEKKRLGNAKE 531
Y +L + L K G A+E
Sbjct: 567 EHAYAVLTDALCKA--GRAEE 585
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 167/371 (45%), Gaps = 7/371 (1%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
+++ +++ L K + EL+ E+ NG V ++ T ++I+ + G+ D A+E
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISA--NGLVPNVITYTSIIDGYCKSGKVDIALEVL 485
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKT 279
+ M++ G + + + LM LVK + A + + KD I + + L+ G C
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 545
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
D+A + + M Q G PD +Y + C+ + ++ + KG + + Y
Sbjct: 546 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYY 602
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ KA + A + E+M + C PD+ YS L+ L K R+ +A I + M
Sbjct: 603 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 662
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+ + Y +I + ++A ++ +M KP TY + C++ R++
Sbjct: 663 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 722
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L+ M + V+ D TY L+ G G ++ A S + M+ P + TY +L +
Sbjct: 723 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 782
Query: 520 KLEKKRLGNAK 530
L K L +
Sbjct: 783 HLLKGNLAYVR 793
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 171/386 (44%), Gaps = 20/386 (5%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYD 214
G T Y T++D K+ L++ M ++ G + T S ++ L + R +
Sbjct: 594 GVALTKVYYTTLIDGFSKAGNTDFAATLIERM--IDEGCTPDSYTYSVLLHALCKQKRLN 651
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI-PLSSQIFNILI 273
+A+ M G++ A ++L+D +++ +HA +++ E S+ + + I
Sbjct: 652 EALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFI 711
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+ +CK +++DA+ + +M ++G +PDVV+Y I+ + TLK M C+
Sbjct: 712 NSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCE 771
Query: 334 PSVITYTIVMHALGKAK----------------QINEALKVYEKMKSDDCLPDTSFYSSL 377
P+ TY +++ L K +++ ++ E+M P + YSSL
Sbjct: 772 PNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSL 831
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I KAGR+++A + + M +G+ PN Y +I C E AL + M E
Sbjct: 832 IAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGF 891
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
+P E+Y L+ C + + + L + + + D + L GL+++G +++
Sbjct: 892 QPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQ 951
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
M + TY ++ K+ +
Sbjct: 952 MLSIMEKRYCCISSQTYALVTNKMHE 977
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 179/371 (48%), Gaps = 21/371 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN+++ L K KK L+ +M + +G + ++ T +T+++ +D+A F
Sbjct: 500 YNSLMYGLVKDKKLHKAMALLTKMQK--DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEM 557
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
M++ G++ D A +VL D L K E AY + + + L+ + LI G+ K
Sbjct: 558 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV--RKGVALTKVYYTTLIDGFSKAGNT 615
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D A ++ M +G +PD +Y+ + C++K + L +M +G K ++ YTI+
Sbjct: 616 DFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTIL 675
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ + + + + A ++Y +M S P + Y+ I K GR++DA ++ M+++GV
Sbjct: 676 IDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGV 735
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+V+TYN +I + A L++M C+P+ TY LLK + V +
Sbjct: 736 APDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSV 795
Query: 463 ----------------LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
LL M K+ ++ TY+SL+ G ++G+LE AC + M KG
Sbjct: 796 DTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKG 855
Query: 507 IVPYHSTYKML 517
+ P Y +L
Sbjct: 856 LSPNEDIYTLL 866
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 176/366 (48%), Gaps = 45/366 (12%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKD 260
++ L + GR DA F M + GV + ++ K + A K+ +E
Sbjct: 294 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 353
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR-- 318
C P +N LI+G C +K ++A++ + ++GF+P VV++T I YC + F
Sbjct: 354 CHP-DDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDA 411
Query: 319 ------------KVD--------------DTLKEMQE-------KGCKPSVITYTIVMHA 345
K+D D LKE +E G P+VITYT ++
Sbjct: 412 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDG 471
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K+ +++ AL+V + M+ D C P+ Y+SL++ L K ++ A + M+K G++PN
Sbjct: 472 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 531
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-KVLNFLL 464
V+TY T++ C + +NA +L + ME++ KPD YA L C+ R + +F++
Sbjct: 532 VITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV 591
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EK 523
+ V++ Y +L+ G ++G + A + E MI +G P TY +L L ++
Sbjct: 592 ----RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQ 647
Query: 524 KRLGNA 529
KRL A
Sbjct: 648 KRLNEA 653
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/448 (25%), Positives = 208/448 (46%), Gaps = 21/448 (4%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPA--FGFFTWAKTQ 154
V ++ +ILS + + + A K SV+ + V R S PA FF W +
Sbjct: 27 VAELGRILSTRRWNKGR---AYKRLAPSVTAAHVADLFRADSTAPEPATALAFFEWLARR 83
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G+ HT + + ++ +L + + LV M ++ + + MR
Sbjct: 84 DGFRHTADSHAALLHLLSRRRAPAQYERLVVSM-------LNCSDTAEDMRVSA------ 130
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILI 273
DA++A R + + + + +L + + E+ +V+ + +D + + +N +I
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+CK + A + + + + G P+ + + YCR + RK M GC+
Sbjct: 191 KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+ +YTI++ L AK + +AL ++ MK D C P+ ++ LI L K+GRV DA +
Sbjct: 251 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
F+ M + GVVP+V+TYN MI +ALK+ + ME++ C PD TY L+ C
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD 370
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI-SKGIVPYHS 512
+K + LL + K + T+ +L+ G + K + A +M+ SK +
Sbjct: 371 QKTEEA-EELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 429
Query: 513 TYKMLEEKLEKKRLGNAKERINKLLAHA 540
K++ ++K RL AKE +N++ A+
Sbjct: 430 FGKLINSLIKKDRLKEAKELLNEISANG 457
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 187/381 (49%), Gaps = 21/381 (5%)
Query: 161 PEMYNTMVDVLG-----KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
PE + VLG + +K C ++ ++ M N Y + + +++ L
Sbjct: 216 PETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEY----SYTILIQGLCDAKCVRK 271
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-----FN 270
A+ F MK+ G + RA + L+ L K V A +F D +P + + +N
Sbjct: 272 ALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF----DAMPQNGVVPSVMTYN 327
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+I G+ K +++DA K + M + G PD +Y I C +K + ++ L ++
Sbjct: 328 AMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAVKE 386
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P+V+T+T +++ A++ ++AL++ KM S C D + LI L K R+K+A
Sbjct: 387 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 446
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+ ++ G+VPNV+TY ++I C + + AL++L+ ME D C+P+ TY L+
Sbjct: 447 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 506
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
+ K++ LLT M K+ + + TY +L++G + + A FE M G+ P
Sbjct: 507 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 566
Query: 511 HSTYKMLEEKLEKKRLGNAKE 531
Y +L + L K G A+E
Sbjct: 567 EHAYAVLTDALCKA--GRAEE 585
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 167/371 (45%), Gaps = 7/371 (1%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
+++ +++ L K + EL+ E+ NG V ++ T ++I+ + G+ D A+E
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISA--NGLVPNVITYTSIIDGYCKSGKVDIALEVL 485
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKT 279
+ M++ G + + + LM LVK + A + + KD I + + L+ G C
Sbjct: 486 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 545
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
D+A + + M Q G PD +Y + C+ + ++ + KG + + Y
Sbjct: 546 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYY 602
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ KA + A + E+M + C PD+ YS L+ L K R+ +A I + M
Sbjct: 603 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 662
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+ + Y +I + ++A ++ +M KP TY + C++ R++
Sbjct: 663 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 722
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L+ M + V+ D TY L+ G G ++ A S + M+ P + TY +L +
Sbjct: 723 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 782
Query: 520 KLEKKRLGNAK 530
L K L +
Sbjct: 783 HLLKGNLAYVR 793
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 171/386 (44%), Gaps = 20/386 (5%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYD 214
G T Y T++D K+ L++ M ++ G + T S ++ L + R +
Sbjct: 594 GVALTKVYYTTLIDGFSKAGNTDFAATLIERM--IDEGCTPDSYTYSVLLHALCKQKRLN 651
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI-PLSSQIFNILI 273
+A+ M G++ A ++L+D +++ +HA +++ E S+ + + I
Sbjct: 652 EALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFI 711
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+ +CK +++DA+ + +M ++G +PDVV+Y I+ + TLK M C+
Sbjct: 712 NSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCE 771
Query: 334 PSVITYTIVMHALGKAK----------------QINEALKVYEKMKSDDCLPDTSFYSSL 377
P+ TY +++ L K +++ ++ E+M P + YSSL
Sbjct: 772 PNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSL 831
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I KAGR+++A + + M +G+ PN Y +I C E AL + M E
Sbjct: 832 IAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGF 891
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
+P E+Y L+ C + + + L + + + D + L GL+++G +++
Sbjct: 892 QPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQ 951
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
M + TY ++ K+ +
Sbjct: 952 MLSIMEKRYCCISSQTYALVTNKMHE 977
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 78/271 (28%), Positives = 144/271 (53%), Gaps = 2/271 (0%)
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
S +N LI G C + +A + +M ++G PDVV+YT +E C+ +++ L
Sbjct: 156 SYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLD 215
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM+ KGC P +ITY +V++ + + ++++A++ + + S C P+T Y+ ++ L A
Sbjct: 216 EMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAE 275
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
R +DA ++ +M ++G PNV+T+N +IS C R E A+++L ++ + C P+ +Y
Sbjct: 276 RWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYN 335
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
P+L C++K+M + M D +Y +L+ L G+++ A ++ K
Sbjct: 336 PILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 395
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
G P +Y + + L K G KE + L
Sbjct: 396 GCTPVLISYNTVIDGLTKA--GKTKEALELL 424
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 186/388 (47%), Gaps = 9/388 (2%)
Query: 164 YNTMVDVL-GKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFR 221
YNT++ L G+ + LV D L G V + T + ++ + Y A++
Sbjct: 159 YNTLIRGLCGRGRTG---NALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLD 215
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKT 279
M+ G D +V+++ + + V+ A + L C P ++ +NI++ G C
Sbjct: 216 EMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEP-NTVSYNIVLKGLCTA 274
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+ +DA+K M EM Q+G+ P+VV++ I CR + L ++ + GC P+ ++Y
Sbjct: 275 ERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSY 334
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++HA K K+++ A+ E M S C PD Y++L+ L + G V A E+ +K
Sbjct: 335 NPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 394
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G P +++YNT+I + + AL+LL +M +PD TY+ + CR+ R++
Sbjct: 395 KGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEE 454
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ + + Y +++ GL + + A F MIS G +P STY +L E
Sbjct: 455 AIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIE 514
Query: 520 KLEKKRL-GNAKERINKLLAHAKEQKTF 546
L + L A+E + +L + K
Sbjct: 515 GLTYEGLVKEARELLGELCSRGVVSKGL 542
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/364 (24%), Positives = 175/364 (48%), Gaps = 7/364 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN MV + + LV +M + Y T +T++R L GR +A+ M
Sbjct: 127 YNAMVAGYCVTGQLDAARRLVADMPMEPDSY----TYNTLIRGLCGRGRTGNALVVLDDM 182
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ G D ++L++ K + + A K+ E K C P +N++++G C+ +
Sbjct: 183 LRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAP-DIITYNVVVNGICQEGR 241
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VDDA + +K + G P+ VSY ++ C + + + + EM +KG P+V+T+ +
Sbjct: 242 VDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNM 301
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L + + A++V +++ C P++ Y+ ++ K ++ A E M +G
Sbjct: 302 LISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRG 361
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P++++YNT++++ C E + A++LL ++++ C P +Y ++ + + K
Sbjct: 362 CYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEAL 421
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL M + D TY+++ GL ++E A F ++ GI P Y + L
Sbjct: 422 ELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGL 481
Query: 522 EKKR 525
K+R
Sbjct: 482 CKRR 485
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 124/278 (44%), Gaps = 37/278 (13%)
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF----RKVDD----- 322
LI C + + +A++ + PDV++Y + YC R V D
Sbjct: 100 LIKKLCASGRTAEARRVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPMEP 154
Query: 323 -----------------------TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
L +M +GC P V+TYTI++ A K +A+K+
Sbjct: 155 DSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLL 214
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
++M++ C PD Y+ ++ + + GRV DA E + + G PN ++YN ++ C
Sbjct: 215 DEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTA 274
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
E+A KL+ +M + P+ T+ L+ CR+ ++ +L + K + ++ +Y
Sbjct: 275 ERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSY 334
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ + K++ A +F E M+S+G P +Y L
Sbjct: 335 NPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTL 372
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 89/205 (43%), Gaps = 9/205 (4%)
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L + + EAL++ E M + ++LI L +GR +A + +
Sbjct: 66 LRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVLAACE---- 121
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+V+ YN M++ C + + A +L+ M + PD TY L++ C + R
Sbjct: 122 -PDVMAYNAMVAGYCVTGQLDAARRLVADMPME---PDSYTYNTLIRGLCGRGRTGNALV 177
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL- 521
+L M + D TY L+ + + A +EM +KG P TY ++ +
Sbjct: 178 VLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGIC 237
Query: 522 EKKRLGNAKERINKLLAHAKEQKTF 546
++ R+ +A E + L +H E T
Sbjct: 238 QEGRVDDAIEFLKSLPSHGCEPNTV 262
>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
Length = 855
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 175/365 (47%), Gaps = 22/365 (6%)
Query: 176 KFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRA 234
KF ++L+KEM + G+V +T S ++ L + + A F+ MK GV D
Sbjct: 268 KFDKAFQLIKEM--MRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYT 325
Query: 235 LSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
++L+D+ K +E A +F E + C P + + LIH + K ++V A M
Sbjct: 326 YTILIDSFCKAGLIEQAQWLFEEMRSVGCSP-TVVTYTALIHAYLKAKQVPQANDIFHRM 384
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM----------------QEKGCKPSV 336
G P+ V+Y ++ C+ + K + ++ P+V
Sbjct: 385 VDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNV 444
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+TY ++ L KA +++ A ++ + M S C P+ Y +LI KAG++ A E+F
Sbjct: 445 VTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQ 504
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M K G +P+V TY ++I + A+K+L +M +D C P+ TY ++ CR
Sbjct: 505 MTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGE 564
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ LL+ M + S + TY +L+ GL ++GK++L+ F +M KG P + TY++
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRV 624
Query: 517 LEEKL 521
L L
Sbjct: 625 LINHL 629
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 169/376 (44%), Gaps = 20/376 (5%)
Query: 164 YNTMVDVLGK----SKKFCLMWELVKEMDELNNGYV-----------SLATMSTIMRRLV 208
Y +VD L K SK F + +L+ D ++ + ++ T ++ L
Sbjct: 396 YGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLC 455
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS-Q 267
+ + D A E M G E + L+D K ++ A +VFL+ C L S
Sbjct: 456 KAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVH 515
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+ LI K ++D A K + +M + +P+VV+YT I+ CR + K L M
Sbjct: 516 TYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLM 575
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+EKGC P+V+TYT ++ LGKA +I+ +L ++ +M C P+ Y LI L AG +
Sbjct: 576 EEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLL 635
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A + +MK+ + Y I +L +L++ME P Y L
Sbjct: 636 DKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPVYGML 693
Query: 448 LKMCCRKKRMKVLNFLLTHMFK--NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
+ + R+++ L M + + V D YASL++ L + ++E A + EM +
Sbjct: 694 IDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRR 753
Query: 506 GIVPYHSTYKMLEEKL 521
G VP S + L + L
Sbjct: 754 GFVPELSVFVCLIKGL 769
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 181/393 (46%), Gaps = 16/393 (4%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
GY + YN +V VL + + L + + KEM E +G+ + T+ L + GR+
Sbjct: 35 GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSE--SGFCMDRFTVGCFAHALCKEGRWA 92
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
DA++ +++ + DT + ++ L++ + + A + CIP + + L
Sbjct: 93 DALDM---IEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP-NVVTYRTL 148
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+ G+ K +++ ++ + M +G +P+ + + YC EKD+ L M GC
Sbjct: 149 LSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGC 208
Query: 333 KPSVITYTIVMHAL-GKAKQ-----INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
P + Y I + ++ G+ K ++ A K+Y +M + +C+ + ++ L G+
Sbjct: 209 PPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGK 268
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
A ++ ++M ++G VP+ TY+ +I+ C ++ E A L Q+M+ PD TY
Sbjct: 269 FDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTI 328
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+ C+ ++ +L M S TY +L+ +++ ++ A F M+ G
Sbjct: 329 LIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAG 388
Query: 507 IVPYHSTYKMLEEKLEKK-RLGNAKERINKLLA 538
P TY L + L K + A E KL+
Sbjct: 389 CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIG 421
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 129/278 (46%), Gaps = 17/278 (6%)
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
C K D A + +KEM ++GF PD +Y+ I C K +EM+ G P V
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TYTI++ + KA I +A ++E+M+S C P Y++LI KA +V AN+IF
Sbjct: 324 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 383
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM----------------EEDLCKPD 440
M G PN +TY ++ C A ++ K+ + P+
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ C+ ++ + LL M + + Y +L+ G ++GK++ A F
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503
Query: 501 EMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLL 537
+M G +P TY L +++ K RL A + ++++L
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQML 541
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 131/306 (42%), Gaps = 24/306 (7%)
Query: 250 HAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKV------DDAQKAMKEMFQQGFSPDVV 302
+AYK+ C P ++NI I C K+ D A+K EM + V
Sbjct: 195 YAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKV 254
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+ F C F K +KEM KG P TY+ V+ L A ++ +A ++++M
Sbjct: 255 NVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 314
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
K PD Y+ LI KAG ++ A +FE+M+ G P V+TY +I + +
Sbjct: 315 KMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQV 374
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG----- 477
A + +M + C+P+ TY L+ C+ + + + S D+
Sbjct: 375 PQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPC 434
Query: 478 -----------TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-R 525
TY +LV GL ++ K++ A + M+S G P H Y L + K +
Sbjct: 435 EDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGK 494
Query: 526 LGNAKE 531
+ +A+E
Sbjct: 495 IDSAQE 500
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 135/280 (48%), Gaps = 8/280 (2%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
T+ GY+ + Y +++D + K + L +++ +M + ++ ++ T + ++ L R G
Sbjct: 506 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK-DSCTPNVVTYTAMIDGLCRIGE 564
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFN 270
+ A++ M++ G + + L+D L K ++ + +F + K C P + +
Sbjct: 565 SEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSP-NYVTYR 623
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+LI+ C +D A+ + EM Q + + Y C I+ + K F L+EM+
Sbjct: 624 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESY 681
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKS--DDCLPDTSFYSSLIFILSKAGRVK 388
G P Y +++ KA ++ A++++++M D Y+SLI L A +V+
Sbjct: 682 GTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVE 741
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
+A ++ +M ++G VP + + +I + + AL+L
Sbjct: 742 EAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 87/218 (39%), Gaps = 9/218 (4%)
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D+ +++ G +PS +TY ++ L A Q++ +V ++M D L
Sbjct: 26 DSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHAL 85
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K GR DA ++ E ++ + + MIS S + A+ L +M + C P+
Sbjct: 86 CKEGRWADALDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNV 142
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY LL +KK++ ++ M + + + SLV A
Sbjct: 143 VTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNR 202
Query: 502 MISKGIVPYHSTYKML------EEKLEKKRLGNAKERI 533
M + G P + Y + +EKL L + E+I
Sbjct: 203 MTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKI 240
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 150 bits (379), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 177/331 (53%), Gaps = 5/331 (1%)
Query: 182 ELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+ +K +DE+ + + + T + ++ + + GR DDA+E + + YG E +T + ++++
Sbjct: 10 QAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVL 69
Query: 240 DTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
L E A ++ E K C P + FN+LI C+ V+ A + ++++ + G
Sbjct: 70 KGLCTAERWEDAEELMGEMGQKGCPP-NVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 128
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+P+ +SY + +C++K K L M +GC P +++Y ++ AL ++ +++ A++
Sbjct: 129 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 188
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ ++K C P Y+++I L+KAG+ K+A E+ +M +G+ P+++TY+T+ + C
Sbjct: 189 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 248
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E+A++ K+++ +P+ Y ++ C+++ L +M N +
Sbjct: 249 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 308
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIV 508
TY L+ GL G ++ A +E+ S+G+V
Sbjct: 309 TYTILIEGLAYEGLIKEARDLLDELCSRGVV 339
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 121/245 (49%)
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK A K + EM +G +PD+V+Y + C+E + LK + GC+P+
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
++Y IV+ L A++ +A ++ +M C P+ ++ LI L + G V+ A E+ E
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
+ K G PN L+YN ++ + C + + + A+ L M C PD +Y LL CR
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ V LL + + +Y +++ GL ++GK + A EM+SKG+ P TY
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242
Query: 517 LEEKL 521
+ L
Sbjct: 243 IAAGL 247
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 159/341 (46%), Gaps = 39/341 (11%)
Query: 244 KGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
K + + A K+ E +D C P +N++++G C+ +VDDA + +K + G P+
Sbjct: 4 KRSGYKQAMKLLDEMRDKGCTP-DIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT----------------------- 338
VSY ++ C + + ++ + EM +KGC P+V+T
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 339 ------------YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
Y ++HA K K++++A+ + M S C PD Y++L+ L ++G
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
V A E+ +K +G P +++YNT+I + + AL+LL +M +PD TY+
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
+ CR+ R++ + + + Y +++ GL + + A F MI G
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302
Query: 507 IVPYHSTYKMLEEKLEKKRL-GNAKERINKLLAHAKEQKTF 546
+P STY +L E L + L A++ +++L + +K+
Sbjct: 303 CMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSL 343
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 123/225 (54%), Gaps = 2/225 (0%)
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C+ +++ L EM++KGC P ++TY +V++ + + ++++A++ + + S C P+T
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y+ ++ L A R +DA E+ +M ++G PNV+T+N +IS C + E AL++L++
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
+ + C P+ +Y PLL C++K+M L M D +Y +L+ L SG+
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
+++A ++ KG P +Y + + L K G KE + L
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKA--GKTKEALELL 225
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%)
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
+ C RS + A+KLL +M + C PD TY ++ C++ R+ L ++
Sbjct: 1 ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
+ +Y +++GL + + E A EM KG P T+ ML L +K L
Sbjct: 61 NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGL 112
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 160/314 (50%), Gaps = 3/314 (0%)
Query: 137 FSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS 196
F + A FF +GY YNT++ K K + L+K+MD+ G
Sbjct: 166 FEDKFARAMEFFDEM-VASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDK-AGGRPD 223
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ +TI+ L + +A++ F +K GV D S+LM L + E A +F
Sbjct: 224 IVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFN 283
Query: 257 EFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E + + FNIL+ CK + +AQ +K M ++G P+ +Y + YC +
Sbjct: 284 EMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQN 343
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ M KGC P+V++Y I+++ KA++I+EA +++++M +P+T Y+
Sbjct: 344 KVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYN 403
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI L +AGR +A E+F+DM+ QG P+++T ++ S C +NAL+L + M++
Sbjct: 404 TLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDS 463
Query: 436 LCKPDCETYAPLLK 449
KP+ TY L++
Sbjct: 464 CLKPNLVTYDILIR 477
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 154/317 (48%), Gaps = 9/317 (2%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS----- 266
R D A + K G E D +V +L+ G E + +EF D + S
Sbjct: 134 RVDFAFSVLGKIIKLGFEPD----AVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNL 189
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+N +I G+CK K A +K+M + G PD+V Y I+ C+++ + D E
Sbjct: 190 HTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSE 249
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
++ KG +P V TY+I+MH L + Q EA ++ +M S + +PD ++ L+ L K G
Sbjct: 250 IKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGM 309
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ +A I + M ++GV PN TYN++++ C +++ A + M C P+ +Y
Sbjct: 310 LSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNI 369
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+ C+ +R+ L M + + Y +L+ GL ++G+ A F++M ++G
Sbjct: 370 LINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQG 429
Query: 507 IVPYHSTYKMLEEKLEK 523
P T +L + L K
Sbjct: 430 CSPDLVTCTILLDSLCK 446
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 137/279 (49%), Gaps = 1/279 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FNILI+ + + ++VD A + ++ + GF PD V+++ I C E F + + EM
Sbjct: 122 FNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMV 181
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
G +P++ TY ++ K + A+ + +KM PD Y+++I L K V
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A +IF ++K +GV P+V TY+ ++ C ++E A L +M PD T+ L+
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C++ + ++ M + V + TY SL+ G K+ A F+ MI+KG +
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361
Query: 509 PYHSTYKMLEEKLEK-KRLGNAKERINKLLAHAKEQKTF 546
P +Y +L K +R+ A+E +++ TF
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTF 400
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 110/208 (52%), Gaps = 6/208 (2%)
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
L EM LN + T + ++ +L + G +A + M + GVE + + LM+
Sbjct: 281 LFNEMMSLNI-MPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGY 339
Query: 243 VKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
N V A VF + K C+P + +NILI+G+CK +++D+A++ EM +G P+
Sbjct: 340 CLQNKVFEARMVFDAMITKGCMP-NVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPN 398
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+Y I C+ + + K+MQ +GC P ++T TI++ +L K ++ AL+++
Sbjct: 399 TFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFR 458
Query: 361 KMKSDDCL-PDTSFYSSLIFILSKAGRV 387
M+ D CL P+ Y LI + K+G++
Sbjct: 459 AMQ-DSCLKPNLVTYDILIRAMYKSGKI 485
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 123/261 (47%)
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
C ++DA + M + P +V + + R K + V K ++ + V
Sbjct: 60 CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+ I+++ + ++++ A V K+ PD +SSLI L + A E F++
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M G PN+ TYNT+I C + A+ LL+KM++ +PD Y ++ C+ +
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ + + + V D TY+ L+ GL S + E A + F EM+S I+P T+ +
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299
Query: 517 LEEKLEKKRLGNAKERINKLL 537
L +KL K+ + + + I K++
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIM 320
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 198/413 (47%), Gaps = 18/413 (4%)
Query: 134 LRRFSNDLTPAFGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD---- 188
+ F N P+F F + G+ +N ++ K FC + K MD
Sbjct: 101 IESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLL------KGFCQSGDSHKAMDLFCM 154
Query: 189 -ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS 247
+ N + +T++ L +G R +A E F+ MK + ++ S L+D K
Sbjct: 155 MKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGD 214
Query: 248 VEHAYKVFLEFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
VE + + E + + L +F + LI G+C ++ ++ EM ++ +P+VV+Y+
Sbjct: 215 VEEGFGLLEEMEK-MGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYS 273
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
C + C+++ +++ L M +P V+ YT++ L K + ++A+KV + M
Sbjct: 274 CLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKR 333
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
P+ Y+++I L K GRV DA I E M K+G P+V+TY+T++ C + + A
Sbjct: 334 GEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEA 393
Query: 426 LKLLQKM--EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
+ LL + +E KPD + +++ C+++R++ + M + + TY L+
Sbjct: 394 VDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILI 453
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINK 535
G + +GKL A +++ + GI P +TY +L L K + L AK NK
Sbjct: 454 DGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNK 506
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 152/334 (45%), Gaps = 7/334 (2%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
N S ++ +T++ L + YD + M V +LS L+++ V A
Sbjct: 54 NSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFA 113
Query: 252 YKVF-LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMK---EMFQQGFSPDVVSYTCF 307
+ V L K L+ FN+L+ G+C++ D+ KAM M + PD VSY
Sbjct: 114 FGVLGLIMKRGFHLNVYNFNLLLKGFCQS---GDSHKAMDLFCMMKRNCLIPDCVSYNTV 170
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I C+ K + + KEM+ CKP+ +T++ ++ K + E + E+M+
Sbjct: 171 INGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGL 230
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
D YS+LI G ++ E+F +M ++ V PNV+TY+ ++++ C + + + A +
Sbjct: 231 EGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQ 290
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+L M +PD Y L + R +L M K + TY +++ GL
Sbjct: 291 MLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLC 350
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ G+++ A E M KG P TY L + L
Sbjct: 351 KEGRVDDALGILETMAKKGKKPDVVTYSTLVKGL 384
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 149/311 (47%), Gaps = 5/311 (1%)
Query: 236 SVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
+ L+D L K +H V + P + + + LI + T+K A + +
Sbjct: 63 NTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSL-SALIESFVNTQKPSFAFGVLGLIM 121
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
++GF +V ++ ++ +C+ D K D M+ P ++Y V++ L K K++
Sbjct: 122 KRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLV 181
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EA +++++MK +C P++ +S+LI K G V++ + E+M+K G+ +V Y+ +I
Sbjct: 182 EAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALI 241
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
S C++ + E +L +M P+ TY+ L+ C+K++ K +L M V
Sbjct: 242 SGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVR 301
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
D Y L GL ++G+ A + M+ +G P + TY + L K+ G + +
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKE--GRVDDAL 359
Query: 534 NKLLAHAKEQK 544
L AK+ K
Sbjct: 360 GILETMAKKGK 370
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 154/345 (44%), Gaps = 4/345 (1%)
Query: 182 ELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
EL EM N ++ T S +M L + ++ +A + M V D A +VL D
Sbjct: 255 ELFNEMLR-KNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADG 313
Query: 242 LVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
L K A KV L K ++ +N +I+G CK +VDDA ++ M ++G PD
Sbjct: 314 LSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPD 373
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEK--GCKPSVITYTIVMHALGKAKQINEALKV 358
VV+Y+ ++ C + D L + K KP V + +V+ L K +++ A +V
Sbjct: 374 VVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRV 433
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
Y M + Y+ LI AG++ A E+++D G+ PN TY +I+ C
Sbjct: 434 YYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCK 493
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
A L K +P Y L+ CR+ ++ L M + D +
Sbjct: 494 MQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVS 553
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ ++ G +++G +E A EM++ +VP + T+ +L + K
Sbjct: 554 FNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLK 598
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 138/283 (48%), Gaps = 3/283 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGM--KKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+ T ST+++ L G+ D+AV+ + K++ ++ D A ++++ L K + HA +V
Sbjct: 374 VVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRV 433
Query: 255 FLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ + P + +NILI G+ K+ A + K+ G SP+ +YT I C+
Sbjct: 434 YYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCK 493
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + + G +P+V Y +M +L + + +A ++++M++ + PD
Sbjct: 494 MQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVS 553
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
++ +I KAG V+ A E+ +M +VP+ +T++ +I+ + + A L ++M
Sbjct: 554 FNIIIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMV 613
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
PD + LLK K + + + +L M DV +D+
Sbjct: 614 SCGHVPDAVLFDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDS 656
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 114/241 (47%), Gaps = 3/241 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + ++ + G+ A+E ++ G+ + +VL++ L K + A +F
Sbjct: 445 NIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLF 504
Query: 256 LEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ + P S+ +N L+ C+ V+ A+ +EM PDVVS+ I+ +
Sbjct: 505 NKKRASGTRPTVSE-YNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLK 563
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D + L EM P IT++I+++ K Q++EA +YE+M S +PD
Sbjct: 564 AGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVL 623
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+ SL+ S G+ + + + M + VV + +T+++ C S++ + K+L K
Sbjct: 624 FDSLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFS 683
Query: 434 E 434
+
Sbjct: 684 Q 684
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 177/372 (47%), Gaps = 37/372 (9%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
MYNT++D + K K ++L EM ++ G + T S ++ G+ +DA++ F
Sbjct: 227 MYNTIIDSMCKVKLVNEAFDLFSEM--ISKGISPDVVTYSALISGFCILGKLNDAIDLFN 284
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRK 281
M ++ D FNIL++ +CK K
Sbjct: 285 KMILENIKPDVYT----------------------------------FNILVNAFCKDGK 310
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ + + M +QG P+ V+Y ++ YC K+ K M + G P + +Y+I
Sbjct: 311 MKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ K K+ +EA+ ++++M + +PD YSSLI LSK+GR+ A ++ + M +G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V P + TYN+++ + C + + A+ LL K+++ +P+ TY+ L+K C+ +++
Sbjct: 431 VPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDAR 490
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ + +++ TY +++G G A + +M G +P TY+++ L
Sbjct: 491 KVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSL 550
Query: 522 EKKRLGNAKERI 533
KK + E++
Sbjct: 551 FKKDENDMAEKL 562
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 146/302 (48%), Gaps = 6/302 (1%)
Query: 177 FCLMWELVKEMDELN-----NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
FC++ +L +D N N + T + ++ + G+ + F M K G++ +
Sbjct: 270 FCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPN 329
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
+ LMD V A +F + + Q ++I+I+G+CK +K D+A K
Sbjct: 330 FVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFK 389
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
EM ++ PDVV+Y+ I+ + + +M ++G P++ TY ++ AL K
Sbjct: 390 EMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIH 449
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
Q+++A+ + K+K P+ YS LI L ++G+++DA ++FE + +G NV TY
Sbjct: 450 QVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYT 509
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
MI C AL LL KME++ C PD +TY ++ +K + LL M
Sbjct: 510 IMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 569
Query: 471 DV 472
V
Sbjct: 570 GV 571
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 157/336 (46%), Gaps = 2/336 (0%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
I+ LV+ Y + + M+ G++ + ++L++ + + A+ VF +
Sbjct: 91 ILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMG 150
Query: 263 PLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ I F LI G C ++ A ++ GF D +SY I C+ + R
Sbjct: 151 YVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAAL 210
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D L+ + +P+V+ Y ++ ++ K K +NEA ++ +M S PD YS+LI
Sbjct: 211 DLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGF 270
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
G++ DA ++F M + + P+V T+N ++++ C + + + M + KP+
Sbjct: 271 CILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNF 330
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ C K + + M + V+ D +Y+ ++ G + K + A + F+E
Sbjct: 331 VTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKE 390
Query: 502 MISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
M K I+P TY L + L K R+ A + ++++
Sbjct: 391 MHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQM 426
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 65/261 (24%), Positives = 120/261 (45%), Gaps = 5/261 (1%)
Query: 262 IPLSSQIFNILIHGWCKT-----RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
IP SS N + + T VDDA + ++ +P + + + K
Sbjct: 41 IPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKH 100
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ V ++M+ +G KP+++ I+++ + I A V+ K+ +PDT +++
Sbjct: 101 YHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTT 160
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI L G+++ A + + G + ++Y T+I C E AL LLQ+++ +L
Sbjct: 161 LIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNL 220
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+P+ Y ++ C+ K + L + M +S D TY++L+ G GKL A
Sbjct: 221 VQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAI 280
Query: 497 SFFEEMISKGIVPYHSTYKML 517
F +MI + I P T+ +L
Sbjct: 281 DLFNKMILENIKPDVYTFNIL 301
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 116/247 (46%), Gaps = 12/247 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNN---GYVS--LATMSTIMRRLVRGGRYDDAVE 218
YN+++D +CL+ E+ K N G V+ + + S ++ + ++D+A+
Sbjct: 333 YNSLMD------GYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWC 277
F+ M + + D S L+D L K + +A ++ + D +P + + +N ++ C
Sbjct: 387 LFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALC 446
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K +VD A + ++ +G P++ +Y+ I+ C+ + + KG +V
Sbjct: 447 KIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVD 506
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYTI++ NEAL + KM+ + C+PD Y +I L K A ++ +M
Sbjct: 507 TYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREM 566
Query: 398 KKQGVVP 404
+GV P
Sbjct: 567 IARGVRP 573
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 2/218 (0%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
Q G + Y+ M++ K KKF L KEM N + T S+++ L + GR
Sbjct: 357 AQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHR-KNIIPDVVTYSSLIDGLSKSGR 415
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNI 271
A++ M GV R + ++D L K + V+ A + + KD I + ++I
Sbjct: 416 ISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSI 475
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G C++ K++DA+K + + +G + +V +YT I+ +C E F + L +M++ G
Sbjct: 476 LIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNG 535
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
C P TY I++ +L K + + A K+ +M + P
Sbjct: 536 CIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP 573
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 4/177 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y++++D L KS + +LV +M + ++ T ++I+ L + + D A+ +
Sbjct: 403 YSSLIDGLSKSGRISYALQLVDQMHD-RGVPPTIRTYNSILDALCKIHQVDKAIALLTKL 461
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
K G++ + S+L+ L + +E A KVF L K L+ + I+I G+C
Sbjct: 462 KDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGH-NLNVDTYTIMIQGFCVEGL 520
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
++A + +M G PD +Y I ++ + + L+EM +G +P I
Sbjct: 521 FNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIA 577
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 163/310 (52%), Gaps = 12/310 (3%)
Query: 241 TLVKGNSVEHAYKVFLEFKDCIPLSSQI-----------FNILIHGWCKTRKVDDAQKAM 289
+V NS+ + + + + K+ + L +++ FNILI G CK +V A +
Sbjct: 228 NVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVL 287
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
M +QG P+VV+YT ++ Y K+ K + +G P+V +Y+++++ L K
Sbjct: 288 SVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKN 347
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
K ++EA+K++++M + P+T YSSLI L K+GR+ D ++ +++ +G N++TY
Sbjct: 348 KMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITY 407
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N++++ C + + A+ LL KM+++ +PD TY L+ C+ R+K + +
Sbjct: 408 NSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLC 467
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGN 528
++ Y ++ GL + G + A S +M G +P TY+ L L K + G
Sbjct: 468 KGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGK 527
Query: 529 AKERINKLLA 538
A + + +++A
Sbjct: 528 AVKLLREMIA 537
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 112/245 (45%), Gaps = 2/245 (0%)
Query: 282 VDDAQKAMKEMFQ-QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+DDA + + +P + + + + F+ ++M+ KG +P + T+
Sbjct: 33 LDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFN 92
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ Q+N A + K+ PDT ++L+ L G+VK+A + + ++
Sbjct: 93 ILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK 152
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEE-DLCKPDCETYAPLLKMCCRKKRMKV 459
+ ++Y T+I+ C E AL+LL+K+E L +PD Y ++ C+ K +
Sbjct: 153 RFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVID 212
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L + M + + T+ SL+ G G+L+ A EM + P T+ +L +
Sbjct: 213 AYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILID 272
Query: 520 KLEKK 524
L K+
Sbjct: 273 GLCKE 277
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/294 (21%), Positives = 128/294 (43%), Gaps = 36/294 (12%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE---HYCR------------ 313
FN ++ K A ++M +G P++ ++ I H C+
Sbjct: 56 FNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILINCFSHLCQLNFAFSMVAKIL 115
Query: 314 ----EKDFRKVDDTLKEMQEKG-CKPSV---------------ITYTIVMHALGKAKQIN 353
+ D V+ L+ + G K ++ ++Y +++ L K+ +
Sbjct: 116 KLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETR 175
Query: 354 EALKVYEKMKSDDCL-PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
AL++ K++ + PD Y+++I K V DA +++ +M + + PNV+T+N++
Sbjct: 176 AALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSL 235
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
I C + + A+ LL +M + P+ T+ L+ C++ +K +L+ M K V
Sbjct: 236 IYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGV 295
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
+ TY SL+ G ++ A F + +G+ P +Y ++ L K ++
Sbjct: 296 EPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKM 349
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 177/352 (50%), Gaps = 7/352 (1%)
Query: 170 VLGKSKKFCLMWELVKEMDE-LNNGYVSLATMSTIM-RRLVRGGRYDDAVEAFRGMKKYG 227
+LG SK M E K DE L++G + + T++ + G +A+ FR + G
Sbjct: 461 ILGYSKT-GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDA 285
V D + S + L+K V+ A KVF E K+ +P ++ LI G+CK +V+ A
Sbjct: 520 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP-DVFTYSSLISGFCKQGEVEKA 578
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ EM +G +P++ Y ++ C+ D ++ M EKG +P +TY+ ++
Sbjct: 579 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 638
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K++ + EA ++ +M S P + Y++L+ K G ++ A +F +M ++G
Sbjct: 639 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-T 697
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
L++NT+I C + + A +L Q+M PD TY ++ C+ +M+ N L
Sbjct: 698 TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFK 757
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M + ++ +D TY SL+ G + G+ + FE+M++KG+ P TY ++
Sbjct: 758 EMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLV 809
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 152/312 (48%), Gaps = 1/312 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + I L R R ++A F M+K G++ D A S L+D ++ ++ ++
Sbjct: 211 TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM 270
Query: 259 KDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C IP++ +N+LIHG CK K++ A + +K M G P+ ++ IE YCRE +
Sbjct: 271 VSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNM 330
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + L EM+++ PS ++Y +++ L K ++ A K+ EKM P+ YS+L
Sbjct: 331 GRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 390
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + GR+++A + + M GV P++ YN +IS + E A L +++
Sbjct: 391 IMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 450
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KPD T+ + + +M M + + + Y L+ G ++G L A S
Sbjct: 451 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 510
Query: 498 FFEEMISKGIVP 509
F + + G++P
Sbjct: 511 IFRHLHALGVLP 522
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 170/376 (45%), Gaps = 2/376 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y M++ L K L +L+++M + ++ ST++ GR ++A GM
Sbjct: 352 YGAMINGLCHCKDLSLANKLLEKM-TFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 410
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKV 282
GV D + ++ L K +E A LE + + + F I G+ KT K+
Sbjct: 411 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 470
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A K EM G P+ YT I + + + + + + G P V T +
Sbjct: 471 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 530
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+H L K ++ EALKV+ ++K +PD YSSLI K G V+ A E+ ++M +G+
Sbjct: 531 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 590
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN+ YN ++ C + + A KL M E +PD TY+ ++ C+ + +
Sbjct: 591 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 650
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L M V + Y +LV G + G +E A + F EM+ KG S +++ +
Sbjct: 651 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCK 710
Query: 523 KKRLGNAKERINKLLA 538
++ A + +++A
Sbjct: 711 SCKIQEASQLFQEMIA 726
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 157/315 (49%), Gaps = 4/315 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+ ++ L + G A + F GM + G+E D+ S ++D K +V A+ +F E
Sbjct: 598 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 657
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K P S ++N L+HG CK ++ A +EM Q+GF+ +S+ I+ YC+ +
Sbjct: 658 KGVQP-HSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQ 715
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ +EM K P +TYT V+ KA ++ EA ++++M+ + + DT Y+SL+
Sbjct: 716 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 775
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ +K G+ + +FE M +GV P+ +TY +I + C A KL ++
Sbjct: 776 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 835
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
+ L+ C+++ + + LL M + + ++LVR E+GK++ A
Sbjct: 836 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRV 895
Query: 499 FEEMISKGIVPYHST 513
FE + S G+VP +T
Sbjct: 896 FEGVKSLGLVPDTTT 910
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 156/331 (47%), Gaps = 3/331 (0%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
++L T + ++ L + G+ + A E +GM G + ++R +L++ + +++ A ++
Sbjct: 277 INLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALEL 336
Query: 255 F--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+E ++ +P S+ + +I+G C + + A K +++M G P+VV Y+ I Y
Sbjct: 337 LDEMEKRNLVP-SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYA 395
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
E + L M G P + Y ++ L KA ++ EA +++ PD
Sbjct: 396 SEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 455
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
+ + I SK G++ +A + F++M G++PN Y +I+ AL + + +
Sbjct: 456 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 515
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
PD +T + + + R++ + + + + + D TY+SL+ G + G++
Sbjct: 516 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 575
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
E A +EM KGI P Y L + L K
Sbjct: 576 EKAFELHDEMCLKGIAPNIFIYNALVDGLCK 606
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 106/210 (50%), Gaps = 6/210 (2%)
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
++L+ M EKG P+ TYTI+ L +AK++NEA +E+M+ PD + S+LI
Sbjct: 195 NSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGF 254
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+ G + + I + M G+ N++TYN +I C + E A ++L+ M CKP+
Sbjct: 255 MREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNS 314
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
T+ L++ CR+ M LL M K ++ A +Y +++ GL L LA E+
Sbjct: 315 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 374
Query: 502 MISKGIVPYHSTYKML------EEKLEKKR 525
M G+ P Y L E ++E+ R
Sbjct: 375 MTFSGLKPNVVVYSTLIMGYASEGRIEEAR 404
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 120/274 (43%), Gaps = 18/274 (6%)
Query: 254 VFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQK------------------AMKEMFQQ 295
V F++ S +F+ILI + + +D+A +++ M ++
Sbjct: 144 VLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEK 203
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G P+ +YT CR K + T +EMQ+ G KP + ++ + I+E
Sbjct: 204 GLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEV 263
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
L++ + M S + Y+ LI L K G+++ A EI + M G PN T+ +I
Sbjct: 264 LRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEG 323
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C AL+LL +ME+ P +Y ++ C K + + N LL M + + +
Sbjct: 324 YCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPN 383
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
Y++L+ G G++E A + M G+ P
Sbjct: 384 VVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAP 417
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 158/323 (48%), Gaps = 2/323 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
++++R R G+ A ++ G D +VL+ K ++ A +V LE
Sbjct: 146 TSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV-LERMS 204
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P +N ++ C + K+ +A + + Q+ PDV++YT IE C + +
Sbjct: 205 VAP-DVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQA 263
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
L EM++KGCKP V+TY ++++ + K +++EA+K M C P+ ++ ++
Sbjct: 264 MKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRS 323
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ GR DA + DM ++G P+V+T+N +I+ C + A+ +L+KM + C P+
Sbjct: 324 MCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPN 383
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
+Y PLL C++K+M L M D TY +L+ L + GK + A
Sbjct: 384 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILN 443
Query: 501 EMISKGIVPYHSTYKMLEEKLEK 523
++ SKG P TY + + L K
Sbjct: 444 QLSSKGCSPVLITYNTVIDGLTK 466
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 164/336 (48%), Gaps = 7/336 (2%)
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDC 261
+R+LVR G ++ ++ M G D A + L+ + A ++ LE
Sbjct: 114 LRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSGA 173
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+P +N+LI G+CK+ ++D A + ++ M +PDVV+Y + C ++
Sbjct: 174 VP-DVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKEAM 229
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ L ++ C P VITYTI++ A + +A+K+ ++M+ C PD Y+ LI +
Sbjct: 230 EVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 289
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K GR+ +A + +M G PNV+T+N ++ S C+ +A +LL M C P
Sbjct: 290 CKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSV 349
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
T+ L+ CRK+ + +L M K+ ++ +Y L+ G + K++ A + E
Sbjct: 350 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409
Query: 502 MISKGIVPYHSTYKMLEEKLEKKRLGNAK-ERINKL 536
M+S+G P TY L L K +A E +N+L
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQL 445
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/381 (26%), Positives = 183/381 (48%), Gaps = 10/381 (2%)
Query: 146 GFFTWAKTQ--TGYMHTPEMYNTMVDVLGKS---KKFCLMWELVKEMDELNNGYVS--LA 198
GF KT+ T M E + DV+ + +C E+ K + L V+ +
Sbjct: 151 GFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERMSVAPDVV 210
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +TI+R L G+ +A+E + D ++L++ + V A K+ E
Sbjct: 211 TYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEM 270
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K C P +N+LI+G CK ++D+A K + M G P+V+++ + C
Sbjct: 271 RKKGCKP-DVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGR 329
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + L +M KGC PSV+T+ I+++ L + + + A+ V EKM C+P++ Y+
Sbjct: 330 WMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNP 389
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ + ++ A E E M +G P+++TYNT++++ C + + A+++L ++
Sbjct: 390 LLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKG 449
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C P TY ++ + + + LL M + + D TY++L+RGL GK++ A
Sbjct: 450 CSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAI 509
Query: 497 SFFEEMISKGIVPYHSTYKML 517
F +M I P TY +
Sbjct: 510 KIFHDMEGLSIKPSAVTYNAI 530
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 178/362 (49%), Gaps = 8/362 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELV-KEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++ L S K E++ ++M Y + T + ++ A++
Sbjct: 212 YNTILRSLCDSGKLKEAMEVLDRQMQR--ECYPDVITYTILIEATCNDSGVGQAMKLLDE 269
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M+K G + D +VL++ + K ++ A K + C P + NI++ C T
Sbjct: 270 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQP-NVITHNIILRSMCSTG 328
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ DA++ + +M ++G SP VV++ I CR++ + D L++M + GC P+ ++Y
Sbjct: 329 RWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYN 388
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++H + K+++ A++ E M S C PD Y++L+ L K G+ A EI + +
Sbjct: 389 PLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK 448
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK-MCCRKKRMKV 459
G P ++TYNT+I + E A +LL++M KPD TY+ LL+ + C K +
Sbjct: 449 GCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEA 508
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ + M + A TY +++ GL ++ + A F M+ KG P +TY +L E
Sbjct: 509 IK-IFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIE 567
Query: 520 KL 521
+
Sbjct: 568 GI 569
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 156/295 (52%), Gaps = 5/295 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T + ++ + + GR D+A++ M YG + + ++++ ++ A ++
Sbjct: 279 VVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLA 338
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ K C P S FNILI+ C+ R + A +++M + G P+ +SY + +C+E
Sbjct: 339 DMLRKGCSP-SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQE 397
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
K + + L+ M +GC P ++TY ++ AL K + + A+++ ++ S C P Y
Sbjct: 398 KKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITY 457
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+++I L+K G+ + A E+ E+M+++G+ P+++TY+T++ + + A+K+ ME
Sbjct: 458 NTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEG 517
Query: 435 DLCKPDCETY-APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
KP TY A +L +C ++ + ++F L +M + TY L+ G+ +
Sbjct: 518 LSIKPSAVTYNAIMLGLCKAQQTSRAIDF-LAYMVEKGCKPTKATYTILIEGIAD 571
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 140/272 (51%), Gaps = 4/272 (1%)
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
NI + + ++++ K ++ M QG PDV++ T I +CR RK ++ ++
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
G P VITY +++ K+ +I++AL+V E+M PD Y++++ L +G++K+
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A E+ + ++ P+V+TY +I + C S A+KLL +M + CKPD TY L+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C++ R+ L +M + T+ ++R + +G+ A +M+ KG P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347
Query: 510 YHSTYKMLEEKLEKKR-LGNAKERINKLLAHA 540
T+ +L L +KR LG A + + K+ H
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHG 379
>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 173/355 (48%), Gaps = 2/355 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+++ L K + L+K+M+E ++ T STI+ + R ++A++ F M
Sbjct: 206 YTTIINGLCKIGETAAAAGLLKKMEEAG-CQPNVVTYSTIIDSHRKDRRVNEALDIFSYM 264
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
K G+ D + L+ L + + A + E + + + FN+L+ CK KV
Sbjct: 265 KVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKV 324
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+AQ +K M + G PDVV+Y+ + Y + + M KGCKP V +Y I+
Sbjct: 325 SEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNIL 384
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K K+I+EA +++ +M P+ Y++LI L + G +++A +F++M G
Sbjct: 385 INGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGN 444
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+PN+ TY+ ++ C + A +L + M+ KP+ Y L+ C+ ++
Sbjct: 445 LPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARK 504
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + +F + +A Y +++ GL + G L+ A F M G P +Y ++
Sbjct: 505 LFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVI 559
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 165/341 (48%), Gaps = 9/341 (2%)
Query: 144 AFGFFTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS 201
A F++ K + +P++ YN+++ L ++ L+ EM LN + T +
Sbjct: 257 ALDIFSYMKVKG---ISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNI-MPDIVTFN 312
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFK 259
++ + + G+ +A + M + GVE D S LM + V A K+F + K
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
C P +NILI+G+CK +++D+A++ EM QG +P+ VSY I C+ R+
Sbjct: 373 GCKP-DVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLRE 431
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ K M G P++ TY+I++ K +A +++ M+S P+ Y+ LI
Sbjct: 432 ARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILID 491
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+ K+G ++DA ++F ++ +G+ PN Y T+I+ C + AL+ + MEED C P
Sbjct: 492 AMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPP 551
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
D +Y +++ K L+ M D GT A
Sbjct: 552 DEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGTTA 592
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 167/339 (49%), Gaps = 10/339 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAF-RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
+ ++ +V+ G+Y D V + + M+ G+ + LS+L++ V+ A+ V +
Sbjct: 101 TKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQRVDLAFSVLAKI- 159
Query: 260 DCIPLSSQ----IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
I L Q F LI+ CK K A + +M +G PDV +YT I C+
Sbjct: 160 --IKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIG 217
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ LK+M+E GC+P+V+TY+ ++ + K +++NEAL ++ MK PD Y+
Sbjct: 218 ETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYN 277
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
SLI L + K+A+ + +M+ ++P+++T+N ++ + C + A +L+ M E
Sbjct: 278 SLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEM 337
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
+PD TY+ L+ + + L M D +Y L+ G + +++ A
Sbjct: 338 GVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEA 397
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
F EMI +G+ P + +Y L L +LG+ +E N
Sbjct: 398 KQLFNEMIHQGLTPNNVSYNTLIHGL--CQLGSLREARN 434
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 171/377 (45%), Gaps = 12/377 (3%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G T + T+++ L K KF EL +M + T +TI+ L + G
Sbjct: 163 GLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVA-RGCRPDVYTYTTIINGLCKIGETAA 221
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NILI 273
A + M++ G + + S ++D+ K V A +F + +S IF N LI
Sbjct: 222 AAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIF-SYMKVKGISPDIFTYNSLI 280
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G C + +A + EM PD+V++ ++ C+E + LK M E G +
Sbjct: 281 QGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVE 340
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P V+TY+ +M+ ++ EA K+++ M + C PD Y+ LI K R+ +A ++
Sbjct: 341 PDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQL 400
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
F +M QG+ PN ++YNT+I C A L + M + P+ TY+ LL C+
Sbjct: 401 FNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCK 460
Query: 454 K----KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ K ++ + + K ++ M Y L+ + +SG L A F E+ KG+ P
Sbjct: 461 QGYFGKAFRLFRAMQSTYSKPNLVM----YNILIDAMCKSGNLRDARKLFSELFVKGLQP 516
Query: 510 YHSTYKMLEEKLEKKRL 526
Y + L K+ L
Sbjct: 517 NAQIYTTIINGLCKEGL 533
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/316 (23%), Positives = 137/316 (43%), Gaps = 11/316 (3%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +++++ L ++ +A M+ + D +VL+DT+ K V A V
Sbjct: 275 TYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTM 334
Query: 259 K------DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
D + SS L++G+ +V +A+K M +G PDV SY I YC
Sbjct: 335 TEMGVEPDVVTYSS-----LMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYC 389
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ K + EM +G P+ ++Y ++H L + + EA +++ M ++ LP+
Sbjct: 390 KVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLF 449
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
YS L+ K G A +F M+ PN++ YN +I + C +A KL ++
Sbjct: 450 TYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSEL 509
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+P+ + Y ++ C++ + +M ++ D +Y ++RG +
Sbjct: 510 FVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDE 569
Query: 493 ELACSFFEEMISKGIV 508
A EM KG +
Sbjct: 570 SRAVQLIGEMRDKGFI 585
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 155/325 (47%), Gaps = 4/325 (1%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA--Y 252
++L T + +R L GR +AV GM+ Y V D + L+ L K + + A Y
Sbjct: 222 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 280
Query: 253 KVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ + C+P +N +I G+CK V +A + +K+ +GF PD V+Y I C
Sbjct: 281 LRRMMNQGCLP-DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLC 339
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
E D + + E Q KG KP ++ Y ++ L I AL+V +M + C PD
Sbjct: 340 AEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQ 399
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+ +I L K G + DA + D +G +P+V T+NT+I C R + ++AL+L+++M
Sbjct: 400 TYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERM 459
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
E PD TY +L C+ ++ +N M + TY L+ S K+
Sbjct: 460 WEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKM 519
Query: 493 ELACSFFEEMISKGIVPYHSTYKML 517
E A +M +G+ P ++ L
Sbjct: 520 EEASKVIVKMSQEGLHPDAVSFNTL 544
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 100/358 (27%), Positives = 175/358 (48%), Gaps = 14/358 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++D K EL+K D + G+V T +++ L G + A+E F
Sbjct: 296 YNTIIDGYCKISMVQEATELLK--DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNE 353
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVE----HAYKVFLEFKD--CIPLSSQIFNILIHGW 276
+ G++ D V+ ++LVKG ++ HA +V E + C P Q +NI+I+G
Sbjct: 354 AQAKGIKPDI----VVYNSLVKGLCLQGLILHALQVMNEMAEEGCHP-DIQTYNIVINGL 408
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK + DA M + +G+ PDV ++ I+ YC+ ++ M E G P
Sbjct: 409 CKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDT 468
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
ITY V++ L KA ++NE + +++M C P+ Y+ LI ++ ++++A+++
Sbjct: 469 ITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVK 528
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M ++G+ P+ +++NT+I C + E A L QK+EE +T+ L+ K
Sbjct: 529 MSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLN 588
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
M + + M D+ TY L+ G ++ ++ A EMI KG +P ST+
Sbjct: 589 MHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTF 646
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 150/315 (47%), Gaps = 3/315 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ +++++ L G A++ M + G D + +++++ L K ++ A V
Sbjct: 363 IVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMN 422
Query: 257 E--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ K +P FN LI G+CK K+D A + ++ M++ G +PD ++Y + C+
Sbjct: 423 DAIMKGYLP-DVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKA 481
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+V++T +EM KGC P+ ITY I++ ++ ++ EA KV KM + PD +
Sbjct: 482 GKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSF 541
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI+ + G ++ A +F+ ++++G T+NT+I + + A K+ +M
Sbjct: 542 NTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLS 601
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+ D TY L+ C+ + L M K T+ ++ L + ++
Sbjct: 602 KGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQ 661
Query: 495 ACSFFEEMISKGIVP 509
A M+ G+VP
Sbjct: 662 AVGIIHIMVKIGVVP 676
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 143/322 (44%), Gaps = 12/322 (3%)
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCI 262
+R R GR DAV+AF M + A + +MD LV + A+KV++ +
Sbjct: 60 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY---TCFIEHYCREKDFRK 319
I + +C T + A + ++ + +G V+Y C + + D R+
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQ 175
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ D +M P++ + V+HAL K + EA + K+ + Y+ I
Sbjct: 176 LFD---QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIR 232
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L +AGR+ +A + + M+ VP+V+TYNT+I C +S + A+ L++M C P
Sbjct: 233 GLCEAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLP 291
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY ++ C+ ++ LL D TY SL+ GL G +E A F
Sbjct: 292 DDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELF 351
Query: 500 EEMISKGIVPYHSTYKMLEEKL 521
E +KGI P Y L + L
Sbjct: 352 NEAQAKGIKPDIVVYNSLVKGL 373
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 146/318 (45%), Gaps = 20/318 (6%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY+ +NT++D K K +LV+ M E ++ T ++++ L + G+ ++
Sbjct: 428 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTI-TYNSVLNGLCKAGKVNE 486
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIH 274
E F+ M G + ++L++ + N +E A KV ++ ++ + + FN LI+
Sbjct: 487 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 546
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C+ ++ A +++ ++G+S ++ I + + + + EM KG +
Sbjct: 547 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 606
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
TY +++ K ++ A +M +P S + +I L+ RV A I
Sbjct: 607 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 666
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM---- 450
M K GVVP V+ +T+++ A +E A K+L EDL K +Y P ++
Sbjct: 667 HIMVKIGVVPEVV--DTILN---ADKKEIAAPKILV---EDLMKKGHISY-PTYEVLHEG 717
Query: 451 -----CCRKKRMKVLNFL 463
RK RM +LN L
Sbjct: 718 VRDNKLTRKHRMLLLNNL 735
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 99/254 (38%), Gaps = 34/254 (13%)
Query: 297 FSPDVVS--YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
SP + Y I Y R R D + M C P+ Y +M AL A ++
Sbjct: 47 LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 106
Query: 355 ALKVYEKMKSDDCLPDT--------SF-----------------------YSSLIFILSK 383
A KVY +M + PD SF Y +++ L
Sbjct: 107 AHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYA 166
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
G DA ++F+ M V PN+ +N ++ + C R + A LL K+ + + T
Sbjct: 167 HGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFT 226
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y ++ C R+ L+ M V D TY +L+RGL + + A + M+
Sbjct: 227 YNIWIRGLCEAGRLPEAVRLVDGMRAYAVP-DVVTYNTLIRGLCKKSMPQEAMHYLRRMM 285
Query: 504 SKGIVPYHSTYKML 517
++G +P TY +
Sbjct: 286 NQGCLPDDFTYNTI 299
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 89/219 (40%), Gaps = 32/219 (14%)
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y + A +A ++ +A+ +E+M C P Y++++ L A A++++ M
Sbjct: 56 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE----DLCKPDCETYA--------- 445
GV P++ T+ + S C + AL+LL+ + C C YA
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQ 175
Query: 446 ------------------PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+L C++ + LL + + +S++ TY +RGL
Sbjct: 176 LFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLC 235
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
E+G+L A + M + VP TY L L KK +
Sbjct: 236 EAGRLPEAVRLVDGMRAYA-VPDVVTYNTLIRGLCKKSM 273
>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
Length = 465
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 167/330 (50%), Gaps = 5/330 (1%)
Query: 212 RYDDAVEAFRGMKKYGVEK--DTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQI 268
R+ +A E R M G D S L+ K VE + ++ E + + +
Sbjct: 60 RWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ ++ CK+ ++ +A + ++EM + G P ++++ I CREK+ D L++M
Sbjct: 120 YTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA 179
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
G K V+TY +M L KA ++ EA ++ E+MK+ C PD YSS ++ L K+G+V
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM-EEDLCKPDCETYAPL 447
DA+++ E M+ PNV+TYNT++ C + + AL+++++M D C + Y+ +
Sbjct: 240 DAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C+ R + ++ M + D TY+SLV GL ++GK+E A EM +G
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGC 359
Query: 508 VPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
P TY L L RL A+ + ++
Sbjct: 360 KPNAVTYCSLVHGLCSCGRLAEAERMVEEM 389
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 189/378 (50%), Gaps = 12/378 (3%)
Query: 156 GYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST-IMRRLVRGGR 212
G TP+M Y+T++ K+ K EL+KE+ ++ G A M T ++ L + R
Sbjct: 75 GGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEV--ISRGLRPDALMYTKVVASLCKSAR 132
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNI 271
+A+E M + G + L+ + ++E A + + + +N
Sbjct: 133 LGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNT 192
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+ G CK ++ +A++ ++ M G +PDVV+Y+ F+ C+ L++M++
Sbjct: 193 LMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSH 252
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKM-KSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P+V+TY ++ L K+ +I+ AL++ E+M SD C + YS+++ L K GR ++A
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEA 312
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ E M + G P+V+TY+++++ C + E A++ +++M + CKP+ TY L+
Sbjct: 313 RSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG 372
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSM-----DAGTYASLVRGLIESGKLELACSFFEEMISK 505
C R+ ++ M TY +L+ GL ++G+++ A FF+ M S+
Sbjct: 373 LCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQ 432
Query: 506 GIVPYHSTYKMLEEKLEK 523
G P +Y + E L +
Sbjct: 433 GCDPDGVSYSTIVEGLAR 450
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 155/321 (48%), Gaps = 8/321 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G T +NT++ + K + L+++M + + T +T+M L + GR
Sbjct: 145 RAGCCPTLITFNTLISGCCREKNLEMADSLLQKM-AASGVKADVVTYNTLMDGLCKAGRL 203
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNIL 272
+A + MK G D A S + L K V A++V + +D + + +N +
Sbjct: 204 QEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTI 263
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQ-GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+ G CK+ K+D A + M++M G +VV Y+ ++ C+ ++ ++ M G
Sbjct: 264 LDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C+P V+TY+ +++ L KA +I EA++ +M + C P+ Y SL+ L GR+ +A
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAE 383
Query: 392 EIFEDMKKQGVV-----PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ E+M G P+V TYN +I C ++ALK Q+M C PD +Y+
Sbjct: 384 RMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYST 443
Query: 447 LLKMCCRKKRMKVLNFLLTHM 467
+++ R R +L+ +
Sbjct: 444 IVEGLARSGRALQAEMILSEV 464
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 144/307 (46%), Gaps = 15/307 (4%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T +T++ R + A + M GV+ D + LMD L K ++ A ++
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210
Query: 256 LEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
K C P ++ ++G CK+ KV DA + +++M P+VV+Y ++ C+
Sbjct: 211 ERMKASGCAP-DVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCK 269
Query: 314 EKDFRKVDDTLKEMQE----KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
K+D L+ M++ GC +V+ Y+ V+ L K + EA V E M C P
Sbjct: 270 SG---KIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRP 326
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D YSSL+ L KAG++++A E +M +G PN +TY +++ C+ A +++
Sbjct: 327 DVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMV 386
Query: 430 QKMEEDL-----CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
++M C P TY L+ C+ R+ M D +Y+++V
Sbjct: 387 EEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVE 446
Query: 485 GLIESGK 491
GL SG+
Sbjct: 447 GLARSGR 453
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 2/263 (0%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P +S FN L++G+ K + D ++ ++ M + P+VVSY +E C+ + + + ++
Sbjct: 7 PPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEE 66
Query: 323 TLKEMQEKGCK--PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+++M +G + P ++TY+ ++ KA ++ E+ ++ +++ S PD Y+ ++
Sbjct: 67 LVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVAS 126
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K+ R+ +A E+ E+M + G P ++T+NT+IS C E A LLQKM K D
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKAD 186
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ C+ R++ LL M + + D Y+S V GL +SGK+ A E
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLE 246
Query: 501 EMISKGIVPYHSTYKMLEEKLEK 523
+M P TY + + L K
Sbjct: 247 QMRDSHHDPNVVTYNTILDGLCK 269
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 125/243 (51%), Gaps = 10/243 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y++ V L KS K +++++M + ++ ++ T +TI+ L + G+ D A+E M
Sbjct: 225 YSSFVYGLCKSGKVLDAHQVLEQMRDSHHDP-NVVTYNTILDGLCKSGKIDTALEMMEQM 283
Query: 224 KKY-GVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
G + S ++D L K + A V + C P ++ L++G CK
Sbjct: 284 ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRP-DVVTYSSLVNGLCKAG 342
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-----CKPS 335
K+++A +A++EM +G P+ V+Y + C + + ++EM G C PS
Sbjct: 343 KIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPS 402
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V TY ++ L KA +I++ALK +++M+S C PD YS+++ L+++GR A I
Sbjct: 403 VSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMILS 462
Query: 396 DMK 398
+++
Sbjct: 463 EVR 465
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 119/225 (52%), Gaps = 2/225 (0%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M + G P+ V++ + + ++ + L+ M + +P+V++Y ++ L K ++
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 352 INEALKVYEKM--KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+EA ++ M + PD YS+L+ KAG+V+++ E+ +++ +G+ P+ L Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
+++S C + AL+LL++M C P T+ L+ CCR+K +++ + LL M
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ V D TY +L+ GL ++G+L+ A E M + G P Y
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAY 225
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 72/158 (45%), Gaps = 2/158 (1%)
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M C P++ +++L+ SK GR D + E M + + PNV++YN ++ C
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60
Query: 422 EENALKLLQKM--EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
A +L++ M PD TY+ LL C+ +++ LL + + DA Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+V L +S +L A EEMI G P T+ L
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTL 158
>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 917
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 96/337 (28%), Positives = 168/337 (49%), Gaps = 15/337 (4%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+ + T +T+++ L R A + F M+K G + + LM L + +++ A ++
Sbjct: 561 LDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALEL 620
Query: 255 FLEFK--------DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
+C P ++ ++I+I G CK + D+A++ KEM G PDV+SYT
Sbjct: 621 HKNMLSDTSPYGINCKP-NAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTS 679
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I +CR ++ EM + G +P V T+++++ L K ++ EA ++ E M
Sbjct: 680 LIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRG 739
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C+P+T Y++L+ L R+ +A ++F M+K G +P+V+TY T++ C + AL
Sbjct: 740 CIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTAL 799
Query: 427 KLLQKMEEDLC------KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+L +KM D KPD +Y+ ++ C+ R L M V + +Y
Sbjct: 800 ELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYT 859
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
SL+ G SGKLE A F EM+ +G+ TY ++
Sbjct: 860 SLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVM 896
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 173/370 (46%), Gaps = 17/370 (4%)
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
++D+L K K EL++ M + + + T ST+++ L R +A F M+K
Sbjct: 60 LIDILCKEGKVIEANELLEVMIQ-RGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 118
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--------CIPLSSQIFNILIHGWCK 278
G D LM L + ++ A ++ E + C P ++I+I G CK
Sbjct: 119 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS-YSIIIDGLCK 177
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R+ D+A++ KEM QG PDV+SYT I +C + K EM + G +P V T
Sbjct: 178 DRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTT 237
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+++ K ++ EA ++ E M C+ D YS+LI L R+ +A ++F MK
Sbjct: 238 SGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMK 297
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED-------LCKPDCETYAPLLKMC 451
K G P+ + Y T++ C + AL L Q+M D +PD T + L+ +
Sbjct: 298 KLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDIL 357
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++ ++ N LL M + +D TY++L++GL ++ A F M G P
Sbjct: 358 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 417
Query: 512 STYKMLEEKL 521
TY L + L
Sbjct: 418 ITYGTLMKGL 427
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/395 (28%), Positives = 192/395 (48%), Gaps = 13/395 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-----SLATMSTIMRRLVRGGRYDDAVE 218
Y T++ L ++ + +L +EM Y +L + S I+ L + R D+A E
Sbjct: 420 YGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARE 479
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWC 277
F MK G+ D + + L+ E A +F E D I ++LI C
Sbjct: 480 LFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLC 539
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K KV +A K ++ + Q+G DVV+ T ++ C + K +MQ+ GC P+V+
Sbjct: 540 KKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVV 599
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSD------DCLPDTSFYSSLIFILSKAGRVKDAN 391
T +M L ++ I AL++++ M SD +C P+ YS +I L K GR +A
Sbjct: 600 TCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEAR 659
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
E+F++MK GV+P+V++Y ++I C + ++A L +M + +PD T++ L+ M
Sbjct: 660 ELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDML 719
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++ ++ N LL M + + TY +LV+GL + ++ A F +M G +P
Sbjct: 720 CKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDV 779
Query: 512 STYKMLEEKL-EKKRLGNAKERINKLLAHAKEQKT 545
TY L + L + + A E K+L+ + T
Sbjct: 780 VTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGT 814
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/372 (28%), Positives = 177/372 (47%), Gaps = 16/372 (4%)
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
++D+L K K EL++ M + + + T ST+++ L R +A F M+K
Sbjct: 353 LIDILCKEGKVIEANELLEVMIQ-RGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKL 411
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--------CIPLSSQIFNILIHGWCK 278
G D LM L + ++ A ++ E + C P ++I+I G CK
Sbjct: 412 GCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLIS-YSIIIDGLCK 470
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R+ D+A++ +EM QG PDV+SYT I +C + K EM + G +P V T
Sbjct: 471 DRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 530
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
++++ L K ++ EA K+ E + C+ D ++L+ L R+ A ++F M+
Sbjct: 531 SSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQ 590
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL------CKPDCETYAPLLKMCC 452
K G +PNV+T T++ C + AL+L + M D CKP+ +Y+ ++ C
Sbjct: 591 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 650
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ R L M V D +Y SL+ G SGK + A F EM+ G+ P +
Sbjct: 651 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 710
Query: 513 TYKMLEEKLEKK 524
T+ +L + L K+
Sbjct: 711 TFSVLIDMLCKE 722
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 165/320 (51%), Gaps = 15/320 (4%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGM----KKYGVEKDTRALS--VLMDTLVKGNSVE 249
++ T +T+M+ L + G A+E + M YG+ A+S +++D L K +
Sbjct: 597 NVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGRED 656
Query: 250 HAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
A ++F E K + I + LIHG+C++ K DA+ EM G PDV +++ I
Sbjct: 657 EARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLI 716
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+ C+E + ++ L+ M ++GC P+ +TYT ++ L +I+EA +++ KM+ CL
Sbjct: 717 DMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCL 776
Query: 369 PDTSFYSSLIFILSKAGRVKDANEI----FEDMKKQGV--VPNVLTYNTMISSACARSEE 422
PD Y +L+ L + G +K A E+ D + G P+V++Y+ +I C E
Sbjct: 777 PDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGRE 836
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+ A +L ++M+ P+ +Y L+ CR +++ L M V ++A TY+ +
Sbjct: 837 DEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVM 896
Query: 483 VRGLIESGKLELACSFFEEM 502
+ G + G+++ A F++M
Sbjct: 897 IHGFCKEGQIDKA--LFQKM 914
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 178/378 (47%), Gaps = 29/378 (7%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-----SLATMSTIMRRLVRGGRYDDAVE 218
Y T++ L ++ + +L +EM Y +L + S I+ L + R D+A E
Sbjct: 127 YGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARE 186
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWC 277
F+ MK G+ D + + L+ E A +F E D I +LI +C
Sbjct: 187 LFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFC 246
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K KV +A + ++ M +G D+V+Y+ I+ C + + M++ GC+P I
Sbjct: 247 KEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAI 306
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDD------CL-PDTSFYSSLIFILSKAGRVKDA 390
Y +M L + +IN AL ++++M +D C+ PD + S LI IL K G+V +A
Sbjct: 307 AYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEA 366
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
NE+ E M ++G + +++TY+T+I C A L M++ C+PD TY L+K
Sbjct: 367 NELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKG 426
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAG-----------TYASLVRGLIESGKLELACSFF 499
C+ + + L M D G +Y+ ++ GL + + + A F
Sbjct: 427 LCQTGNINIALQLHQEMLN-----DTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 481
Query: 500 EEMISKGIVPYHSTYKML 517
EEM ++GI+P +Y L
Sbjct: 482 EEMKAQGIMPDVISYTTL 499
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 134/266 (50%), Gaps = 10/266 (3%)
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ SS + +IL CK KV +A + ++ M Q+G D+V+Y+ I+ C E +
Sbjct: 54 VTTSSMLIDIL----CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 109
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD------CLPDTSFYS 375
MQ+ GC+P ITY +M L + IN AL+++++M +D C P YS
Sbjct: 110 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 169
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I L K R +A E+F++MK QG++P+V++Y ++I C + E A L +M +
Sbjct: 170 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDV 229
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
+PD T L+ M C++ ++ N LL M +D TY++L++GL ++ A
Sbjct: 230 GIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEA 289
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKL 521
F M G P Y L + L
Sbjct: 290 TQLFMSMKKLGCRPDAIAYGTLMKGL 315
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 146/281 (51%), Gaps = 14/281 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ ++D L K + EL KEM L G + + + ++++ R G++ DA F
Sbjct: 642 YSIIIDGLCKCGREDEARELFKEMKAL--GVIPDVISYTSLIHGFCRSGKWKDAKYLFNE 699
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M GV+ D SVL+D L K V A ++ + + CIP ++ + L+ G C
Sbjct: 700 MVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP-NTVTYTTLVKGLCMND 758
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE------KGCKP 334
++ +A + +M + G PDVV+Y ++ C+ + + + K+M KP
Sbjct: 759 RISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKP 818
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
VI+Y+I++ L K + +EA +++++MK+ +P+ Y+SLI ++G+++DA +F
Sbjct: 819 DVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLF 878
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+M QGV N +TY+ MI C + + A L QKME +
Sbjct: 879 NEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKMEAN 917
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 106/237 (44%), Gaps = 15/237 (6%)
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI---------VMHAL 346
G PD ++ I C K + + + +G P ++TY+I ++ L
Sbjct: 5 GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDIL 64
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
K ++ EA ++ E M C+ D YS+LI L R+ +A +F M+K G P+
Sbjct: 65 CKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDA 124
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDL------CKPDCETYAPLLKMCCRKKRMKVL 460
+TY T++ C AL+L Q+M D CKP +Y+ ++ C+ +R
Sbjct: 125 ITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEA 184
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M + D +Y SL+ G SGK E A F EM+ GI P +T +L
Sbjct: 185 RELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVL 241
>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/356 (27%), Positives = 176/356 (49%), Gaps = 4/356 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGR 212
Q G + Y T+V L K ++F + ++ EM EL G+V + A +S+++ L R G+
Sbjct: 289 QKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIEL--GFVPTEAALSSLVEGLRRKGK 346
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNI 271
DA + +KK G + L+++L K + A +F E + ++ + ++I
Sbjct: 347 VVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSI 406
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI +C+ K+D A + +M G V Y I +C+ + EM +KG
Sbjct: 407 LIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKG 466
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
KP+V++YT ++ +++EA ++Y +M P+T +++LI L +A R+ DA
Sbjct: 467 LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAF 526
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+F++M +Q ++PN +TYN MI C A +LL +M + PD TY PL+
Sbjct: 527 RLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSL 586
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
C R+ + + + ++ Y++L+ G + G+L A EM+ +G+
Sbjct: 587 CSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGV 642
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 163/336 (48%), Gaps = 2/336 (0%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G++ T +++V+ L + K ++LV + ++ SL + ++ L + G++
Sbjct: 324 ELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVG-AMPSLFVYNALINSLCKDGKF 382
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNIL 272
D+A F+ M + G+ + S+L+D+ + ++ A + I ++ +N L
Sbjct: 383 DEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSL 442
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I+G CK + A EM +G P VVSYT I YC + + EM KG
Sbjct: 443 INGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGI 502
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P+ T+T ++ AL +A ++ +A +++++M + +P+ Y+ +I K G A E
Sbjct: 503 APNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFE 562
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ M ++G+VP+ TY +ISS C+ A K + + + K + Y+ LL C
Sbjct: 563 LLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYC 622
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
++ R++ + M K V MD YA L+ G I+
Sbjct: 623 KEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIK 658
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 99/414 (23%), Positives = 177/414 (42%), Gaps = 38/414 (9%)
Query: 148 FTWAKTQTGYMHTPEMYN--TMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMR 205
F TG P Y T++ L ++ + + L EM E N + T + ++
Sbjct: 491 FRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLE-QNMMPNEVTYNVMIE 549
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPL 264
+ G A E M + G+ DT L+ +L V A K + ++ L
Sbjct: 550 GHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKL 609
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ ++ L+HG+CK ++ DA +EM ++G D+V Y I+ +E+D V L
Sbjct: 610 NEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLL 669
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
K M ++ +P + YT ++ KA + +A +++ M + C P+ Y++LI L KA
Sbjct: 670 KNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKA 729
Query: 385 GRVKDANEIFEDM----------------------------------KKQGVVPNVLTYN 410
G + A ++++M +G++ N ++YN
Sbjct: 730 GLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLKGLLANTVSYN 789
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
++ C E A KLL +M ++ PDC TY+ ++ CCR+ + M
Sbjct: 790 ILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNK 849
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ D Y L+ G +G+L A ++MI +G+ P +T+K L +K
Sbjct: 850 GLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRK 903
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 153/340 (45%), Gaps = 2/340 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T+ ++ L + R D + F + G+ D ++ + + + A K ++
Sbjct: 195 TLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKA-KEMIQR 253
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
+ L+ ++N+LIHG CK ++V +A + + Q+G + V+Y + C+ ++F
Sbjct: 254 MESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFE 313
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ EM E G P+ + ++ L + ++ +A + ++K +P Y++LI
Sbjct: 314 VGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALI 373
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L K G+ +A +F++M ++G+ N +TY+ +I S C R + + A+ L KM K
Sbjct: 374 NSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIK 433
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
Y L+ C+ + M + +Y SL+ G GKL A
Sbjct: 434 ITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRL 493
Query: 499 FEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLL 537
+ EM KGI P T+ L L R+ +A +++L
Sbjct: 494 YHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEML 533
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 108/223 (48%), Gaps = 5/223 (2%)
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
D R+V + L + EK S + + +++ + + K++ +++ ++ M+ + +P
Sbjct: 138 DPREVFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLG 197
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME-E 434
++ L+K RV +F ++ G+ P++ Y +I S C A +++Q+ME
Sbjct: 198 EVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESS 257
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
DL + Y L+ C+ KR+ + + + ++ TY +LV GL + + E+
Sbjct: 258 DL---NVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYCTLVLGLCKVQEFEV 314
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
+EMI G VP + L E L +K ++ +A + +N++
Sbjct: 315 GAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRV 357
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 91/205 (44%), Gaps = 21/205 (10%)
Query: 160 TPEM--YNTMVDVLGKS---KKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
TP + Y T+++ L K+ K L+W KEM ++N + T + L R G +
Sbjct: 713 TPNIVTYTTLINELCKAGLMDKAELLW---KEM-LVSNSTPNHVTYCCFLDHLAREGSME 768
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE------FKDCIPLSSQI 268
AV+ M K G+ +T + ++L+ K VE A K+ E F DCI S+
Sbjct: 769 KAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYST-- 825
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+I+ C+ +D A + M +G PD ++Y I C + K + +M
Sbjct: 826 ---IIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMI 882
Query: 329 EKGCKPSVITYTIVMHALGKAKQIN 353
+G KP+ T+ + H + I+
Sbjct: 883 RRGVKPNQATHKSLSHGASRKFSIS 907
>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
Length = 538
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 200/406 (49%), Gaps = 22/406 (5%)
Query: 114 VVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGK 173
VV+ L CG ++N +E +R S TP T +YN ++ L +
Sbjct: 60 VVDGL--CGAGMANQALE-LVRELSGVYTP----------------TVFIYNGIITGLCR 100
Query: 174 SKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR 233
+ + ++++++M E + ++ T + ++ L R + A E F+ MK+ G + +
Sbjct: 101 ASRVMDAYKVLEKMVE-ESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPI 159
Query: 234 ALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
L+ L + ++ A +V +E + +P ++ G CK ++DDA K M+EM
Sbjct: 160 TYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEM 219
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ-EKGCKPSVITYTIVMHALGKAKQ 351
Q G P+ V+Y+ + + + + +V +E + KG Y + AL KA
Sbjct: 220 RQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGY 279
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++ A K E+++ +PD YS LI ++AG+ + E+ EDM++ GV P+V+TY+T
Sbjct: 280 LDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYST 339
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I+ C + ++A +LL+ ME P+ TY ++ C+ +M ++ + M K+
Sbjct: 340 LINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
S D TY+ ++ GL ++G L+ A FE + S P + Y M+
Sbjct: 400 CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMV 445
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 199/402 (49%), Gaps = 13/402 (3%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FT ++ G ++ Y +VD L + ELV+E+ + V + + I+
Sbjct: 41 LFTLLASR-GVVYGETTYKLVVDGLCGAGMANQALELVRELSGVYTPTVFI--YNGIITG 97
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPL 264
L R R DA + M + + + ++L++ L + N + A +VF E K C P
Sbjct: 98 LCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKP- 156
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ + LI + ++D+A + M E DV++ T + C+ ++DD L
Sbjct: 157 NPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKAS---RLDDAL 213
Query: 325 K---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP-DTSFYSSLIFI 380
K EM++ G +P+ +TY+ ++H + +++ ++ +E+ K+ + + Y +
Sbjct: 214 KFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDA 273
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L KAG + A + E++++ GVVP+V+TY+ +I++ + + +L+LL+ M + KPD
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPD 333
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY+ L+ + C++++ + LL M + TY S++ GL +SGK++ +E
Sbjct: 334 VVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYE 393
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKE 542
M+ P TY ++ L K + ++ ++ +L+ ++E
Sbjct: 394 MMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE 435
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 151/323 (46%), Gaps = 5/323 (1%)
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS 265
+L R ++ + V F + GV +++D L A ++ E +
Sbjct: 28 KLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELSGVYTPT 87
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
I+N +I G C+ +V DA K +++M ++ P+V +YT + CR + + +
Sbjct: 88 VFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQ 147
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM+ GCKP+ ITY ++ L +A +I+EAL+V + +S + D ++++ L KA
Sbjct: 148 EMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKAS 207
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP---DCE 442
R+ DA + E+M++ GV PN +TY+ ++ E + ++ + EE K +
Sbjct: 208 RLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFE--EEKARKGGSLEAA 265
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y L C+ + + + ++ V D TY+ L+ +G+ + + E+M
Sbjct: 266 AYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDM 325
Query: 503 ISKGIVPYHSTYKMLEEKLEKKR 525
G+ P TY L L K+R
Sbjct: 326 RRNGVKPDVVTYSTLINVLCKER 348
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 153/307 (49%), Gaps = 3/307 (0%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G P Y T++ L ++ + ++ E L + T +TI+ L + R
Sbjct: 151 RNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELP-TDVITCTTIVGGLCKASRL 209
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNI 271
DDA++ M++ GV + S L+ + ++ + F E K L + +
Sbjct: 210 DDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPG 269
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+ CK +D A+K+++E+ Q G PDVV+Y+ I + R F + L++M+ G
Sbjct: 270 YLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNG 329
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
KP V+TY+ +++ L K ++ +A ++ E M++ P+ Y+S++ L K+G++ + +
Sbjct: 330 VKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVH 389
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++E M K P+V+TY+ +++ ++A+KL + ++ PD Y+ ++
Sbjct: 390 RVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSL 449
Query: 452 CRKKRMK 458
CR +++
Sbjct: 450 CRAGKLE 456
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
+ + + G D ++T R F +V + +G TY +V+ L A
Sbjct: 8 RSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGA 67
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
N+AL++ ++ S P Y+ +I L +A RV DA ++ E M ++ +VPNV TY
Sbjct: 68 GMANQALELVREL-SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTY 126
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
+++ C ++ + A ++ Q+M+ + CKP+ TY L++ R + ++
Sbjct: 127 TILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRS 186
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ D T ++V GL ++ +L+ A F EEM G+ P TY L
Sbjct: 187 LELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNL 234
>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial-like [Glycine max]
Length = 521
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 95/372 (25%), Positives = 186/372 (50%), Gaps = 4/372 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G++ +NT +++L + + EL M + + + I+ L R+D+
Sbjct: 114 GFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRD-PDVVSYTIIIDALCNAKRFDE 172
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIH 274
A + +R + G+ D +A L+ L G V+ AY++ + K + ++S ++N LI
Sbjct: 173 AAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALID 232
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C+ +VD A K M + G PD+V+Y + + C E + ++ M+ G +P
Sbjct: 233 GFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEP 292
Query: 335 SVITYTIVMHALGKAKQINEA-LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+ +Y ++ KA ++ A L + E+M++ + D Y+++I KA R + E+
Sbjct: 293 DLYSYNELLKGFCKANMVDRAHLMMVERMQTKG-MCDVVSYNTVITAFCKARRTRKGYEL 351
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
FE+M +G+ P+++T+N +I + KLL +M + PDC Y ++ C+
Sbjct: 352 FEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCK 411
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
++ V + + M +N V+ D +Y +L+ G ++ ++ A F+EM SKG+ P T
Sbjct: 412 NGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVT 471
Query: 514 YKMLEEKLEKKR 525
YK++ L + +
Sbjct: 472 YKLIVGGLIRGK 483
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 147/303 (48%), Gaps = 5/303 (1%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDCIPL 264
L GGR D A E G+ K GV+ ++ + L+D + V+ A K+ F+ C+P
Sbjct: 199 LCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVP- 257
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+NIL++ C+ VD+A + ++ M + G PD+ SY ++ +C+ + +
Sbjct: 258 DLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMM 317
Query: 325 KE-MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
E MQ KG V++Y V+ A KA++ + +++E+M PD ++ LI +
Sbjct: 318 VERMQTKG-MCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLR 376
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
G ++ ++M K V+P+ + Y ++ C + + A + + M E+ PD +
Sbjct: 377 EGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVIS 436
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y LL C+ R+ L M + D TY +V GLI K+ LAC +++M+
Sbjct: 437 YNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMM 496
Query: 504 SKG 506
+G
Sbjct: 497 ERG 499
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 108/227 (47%), Gaps = 4/227 (1%)
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
+M GF PD+ ++ ++ CR+ + M KG P V++YTI++ AL AK
Sbjct: 109 DMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAK 168
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
+ +EA KV+ ++ PD +L+ L GRV A E+ + K GV N L YN
Sbjct: 169 RFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYN 228
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I C + A+K+ M C PD TY LL CC + + L+ M ++
Sbjct: 229 ALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLVETMERS 288
Query: 471 DVSMDAGTYASLVRGLIESGKLELA-CSFFEEMISKG---IVPYHST 513
V D +Y L++G ++ ++ A E M +KG +V Y++
Sbjct: 289 GVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNTV 335
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 84/212 (39%), Gaps = 37/212 (17%)
Query: 152 KTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGG 211
+ QT M YNT++ K+++ GY
Sbjct: 320 RMQTKGMCDVVSYNTVITAFCKARR-------------TRKGY----------------- 349
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF-N 270
E F M G+ D ++L+D ++ S K+ E L IF
Sbjct: 350 ------ELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYT 403
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
++ CK KVD A ++M + G +PDV+SY + +C+ EMQ K
Sbjct: 404 AVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSK 463
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
G P +TY +++ L + K+I+ A +V+++M
Sbjct: 464 GLYPDEVTYKLIVGGLIRGKKISLACRVWDQM 495
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 94/205 (45%), Gaps = 10/205 (4%)
Query: 338 TYTIVMHALGKA-KQINEAL--KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
TY+ + AL A IN L + M S +PD +++ + +L + R++ A E+F
Sbjct: 83 TYSRFISALCSAPNNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELF 142
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
M +G P+V++Y +I + C + A K+ +++ + PD + L+ C
Sbjct: 143 HSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSG 202
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
R+ + L+ + K V +++ Y +L+ G G+++ A M G VP TY
Sbjct: 203 GRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTY 262
Query: 515 KML-----EEKL--EKKRLGNAKER 532
+L EE + E RL ER
Sbjct: 263 NILLNYCCEEGMVDEAVRLVETMER 287
>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
Group]
Length = 878
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 167/342 (48%), Gaps = 7/342 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGNSVEHAYKV 254
++ T S++M L + GR +A + F M K G+E D L+ KG VE +
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 364
Query: 255 FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
L ++ I +FNILI + K KVD A +M Q G +P+VV Y I+ C+
Sbjct: 365 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Query: 315 KDFRKVDDTL---KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
VDD + ++M ++G P++I YT ++H L + ++A ++ +M +T
Sbjct: 425 G---SVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNT 481
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
F++S+I K GRV ++ ++F+ M + GV P+++TYNT+I C + + A KLL
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M KPD TY L+ CR RM L M + VS + TY +++GL + +
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
A + + G STY ++ L K L + R+
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 643
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 177/410 (43%), Gaps = 78/410 (19%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF- 255
+ + +T++ + G D A + M G+ D S ++ L K +++ A +V
Sbjct: 201 VVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLN 260
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC--- 312
K+ + +N ++HG+C + + +A +K+M G P+VV+Y+ + + C
Sbjct: 261 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNG 320
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIV------------MHAL-------------- 346
R + RK+ D+ M ++G +P + TY + MHAL
Sbjct: 321 RSTEARKIFDS---MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHH 377
Query: 347 ---------GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
K +++++A+ V+ KM+ P+ Y ++I +L K+G V DA FE M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKL-LQKMEEDLC------------------- 437
+G+ PN++ Y ++I C + + A +L L+ ++ +C
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 497
Query: 438 ---------------KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
KPD TY L+ CC +M LL M V D TY +L
Sbjct: 498 IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTL 557
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
+ G +++ A + F+EM+S G+ P TY ++ + L +R AKE
Sbjct: 558 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 156/332 (46%), Gaps = 5/332 (1%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVE-AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
V T + +++ L R DA++ R M + G D + + L+ L N + A +
Sbjct: 125 VDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALE 184
Query: 254 VFLEFKD----CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+ D P +N +++G+ K D A EM +G PDVV+Y+ I
Sbjct: 185 LLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIA 244
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
C+ + K + L M + G P +TY ++H + Q EA+ +KM+SD P
Sbjct: 245 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEP 304
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ YSSL+ L K GR +A +IF+ M K+G+ P++ TY T++ + LL
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 364
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
M + +PD + L+ +++++ + + M ++ ++ + Y +++ L +S
Sbjct: 365 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
G ++ A +FE+MI +G+ P Y L L
Sbjct: 425 GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 145/311 (46%), Gaps = 1/311 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFN 270
+ D A+ F M+++G+ + ++D L K SV+ A F + D + + ++
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 450
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LIHG C K D A++ + EM +G + + + I+ +C+E + + M
Sbjct: 451 SLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 510
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G KP +ITY ++ A +++EA K+ M S PD Y +LI + R+ DA
Sbjct: 511 GVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDA 570
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+F++M GV PN++TYN ++ A +L + + + + TY +L
Sbjct: 571 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHG 630
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ + ++ D+ ++ T+ ++ L++ G+++ A F + G+VP
Sbjct: 631 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPD 690
Query: 511 HSTYKMLEEKL 521
TY ++ E L
Sbjct: 691 VRTYSLMAENL 701
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 45/313 (14%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR-KVDDTLKEM 327
+ ILI C+ ++D A+ + ++GF D +++T ++ C +K +D L+ M
Sbjct: 95 YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154
Query: 328 QEKGC--------------------------------------KPSVITYTIVMHALGKA 349
E GC P V++Y V++ K
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
++A Y +M LPD YSS+I L KA + A E+ M K GV+P+ +TY
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N+++ C+ + + A+ L+KM D +P+ TY+ L+ C+ R + M K
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML------EEKLEK 523
+ D TY +L++G G L + + M+ GI P H + +L +EK+++
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394
Query: 524 KRLGNAKERINKL 536
L +K R + L
Sbjct: 395 AMLVFSKMRQHGL 407
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 143/311 (45%), Gaps = 4/311 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGM---KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
+ +++ L R +A+E M + G D + + +++ K + AY + E
Sbjct: 167 NNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHE 226
Query: 258 FKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
D L + ++ +I CK + +D A + + M + G PD ++Y + YC
Sbjct: 227 MLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 286
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
++ TLK+M+ G +P+V+TY+ +M+ L K + EA K+++ M PD + Y +
Sbjct: 287 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 346
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ + G + + + + + M + G+ P+ +N +I + + + + A+ + KM +
Sbjct: 347 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 406
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
P+ Y ++ + C+ + M ++ + Y SL+ GL K + A
Sbjct: 407 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAE 466
Query: 497 SFFEEMISKGI 507
EM+ +GI
Sbjct: 467 ELILEMLDRGI 477
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 9/311 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
T++ L + G DDA+ F M G+ + + L+ L + + A ++ LE D
Sbjct: 415 GTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLD 474
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
I L++ FN +I CK +V +++K M + G PD+++Y I+ C +
Sbjct: 475 RGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDE 534
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
L M G KP ++TY +++ + ++++AL ++++M S P+ Y+ ++
Sbjct: 535 ATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 594
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L R A E++ + K G + TYN ++ C + + AL++ Q +LC
Sbjct: 595 GLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ----NLCLT 650
Query: 440 DCE----TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
D + T+ ++ + RM L N + D TY+ + LIE G LE
Sbjct: 651 DLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEEL 710
Query: 496 CSFFEEMISKG 506
F M G
Sbjct: 711 DDLFLSMEENG 721
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 157/343 (45%), Gaps = 14/343 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y T++DVL KS ++M ++ G ++ ++++ L ++D A E
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQM--IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILE 471
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRK 281
M G+ +T + ++D+ K V + K+F L + + +N LI G C K
Sbjct: 472 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 531
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSVIT 338
+D+A K + M G PD+V+Y I YCR ++DD L KEM G P++IT
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCR---VSRMDDALALFKEMVSSGVSPNIIT 588
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y I++ L ++ A ++Y + + S Y+ ++ L K +A +F+++
Sbjct: 589 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 648
Query: 399 KQGVVPNVLTYNTMISS--ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
+ T+N MI + C R +E A L + PD TY+ + + +
Sbjct: 649 LTDLQLETRTFNIMIGALLKCGRMDE--AKDLFAAHSANGLVPDVRTYSLMAENLIEQGS 706
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
++ L+ L M +N S D+ S+VR L++ G + A ++
Sbjct: 707 LEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYL 749
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 138/287 (48%), Gaps = 10/287 (3%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM--STIMRRLVRGGRYDD 215
TP + Y +++ L K+ EL+ EM L+ G + L T+ ++I+ + GR +
Sbjct: 443 TPNIIVYTSLIHGLCTCDKWDKAEELILEM--LDRG-ICLNTIFFNSIIDSHCKEGRVIE 499
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILI 273
+ + F M + GV+ D + L+D ++ A K+ + + I + LI
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS-VGVKPDIVTYGTLI 558
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+G+C+ ++DDA KEM G SP++++Y ++ + + + + G +
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+ TY I++H L K +EAL++++ + D +T ++ +I L K GR+ +A ++
Sbjct: 619 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL 678
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
F G+VP+V TY+ M + + E L MEE+ C D
Sbjct: 679 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSAD 725
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 4/231 (1%)
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+P V +Y I CR L + +KG + IT+T ++ L K+ ++A+
Sbjct: 89 TPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMD 148
Query: 358 -VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE---DMKKQGVVPNVLTYNTMI 413
V +M C+PD Y++L+ L R ++A E+ D + G P+V++YNT++
Sbjct: 149 IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ + + A +M + PD TY+ ++ C+ + M +L M KN V
Sbjct: 209 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 268
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
D TY S++ G SG+ + A ++M S G+ P TY L L K
Sbjct: 269 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKN 319
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 150 bits (378), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 165/326 (50%), Gaps = 1/326 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+T++ G A F M+K G+ D + L++ L + ++ A +V E D
Sbjct: 361 TTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVD 420
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ + + +LI G+CK + +A + EM + +P+VV+YT + C++ D R
Sbjct: 421 KGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRA 480
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
++ L EM KG + +V TY +++ L K + +A+++ +M++ D Y++LI
Sbjct: 481 ANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLID 540
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L K+G A+ + ++M +G+ P++ TYN +++ C E KLL+ M E +P
Sbjct: 541 TLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRP 600
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
+ TY L+K C K MK + M +V+ + TY L++G ++ ++ A F
Sbjct: 601 NVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFH 660
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKKR 525
+EMI KG+ S+Y L L KK+
Sbjct: 661 QEMIEKGLRLTASSYSALIRLLNKKK 686
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 153/322 (47%), Gaps = 1/322 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T T++ G ++AV+ M G+E + + ++ L V A +V
Sbjct: 287 VVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLE 346
Query: 257 EFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ + L + +F +I G+C + A++ +EM ++G + D V++T I CR
Sbjct: 347 DMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAG 406
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ ++ D L+EM +KG V+TYT+++ K + EA +V+ +M P+ Y+
Sbjct: 407 ELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYT 466
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+L L K G V+ ANE+ +M +G+ NV TYN++I+ C E A++++ +ME
Sbjct: 467 ALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAA 526
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
+ D TY L+ C+ + +L M + TY L+ G SG++E
Sbjct: 527 GHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGG 586
Query: 496 CSFFEEMISKGIVPYHSTYKML 517
E M+ K + P TY L
Sbjct: 587 KKLLEWMLEKNVRPNVVTYNSL 608
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 136/293 (46%), Gaps = 6/293 (2%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
D+A+ FR + +K+ + ++L+ L+ ++ A + F E P + ++
Sbjct: 241 DEAIALFRELP----DKNVCSHNILLKALLSAGRLKDACQHFDEMSS--PPDVVTYGTMV 294
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
HG+C ++++A K + EM +G + YT I C + L++M G
Sbjct: 295 HGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVA 354
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+ +T V+ + A +++E+M+ D +++LI L +AG +K+A+ +
Sbjct: 355 LDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRV 414
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
++M +G+ +V+TY +I C R A ++ +M P+ TY L C+
Sbjct: 415 LQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCK 474
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
+ ++ N LL M + ++ TY SL+ GL + G LE A EM + G
Sbjct: 475 QGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAG 527
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 133/293 (45%), Gaps = 4/293 (1%)
Query: 215 DAVEAFR---GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFN 270
+ VEAFR M V + + L D L K V A ++ E + L+ +N
Sbjct: 442 NMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYN 501
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI+G CK ++ A + M EM G DV +YT I+ C+ +F + + L+EM +K
Sbjct: 502 SLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDK 561
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G KPS+ TY ++M+ + ++ K+ E M + P+ Y+SL+ +K
Sbjct: 562 GIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKST 621
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
EI++ M Q V PN TYN +I C + AL Q+M E + +Y+ L+++
Sbjct: 622 TEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRL 681
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
+KK+ M ++ + Y+ + LE + +E++
Sbjct: 682 LNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELV 734
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 128/255 (50%), Gaps = 6/255 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y + D L K EL+ EM N G +++ T ++++ L + G + A+
Sbjct: 465 YTALSDGLCKQGDVRAANELLHEM--CNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTE 522
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
M+ G D + L+DTL K + A+ + E D I S +N+L++G+C + +
Sbjct: 523 MEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGR 582
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V+ +K ++ M ++ P+VV+Y ++ YC +K+ + + K M + P+ TY I
Sbjct: 583 VEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNI 642
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ KA+ + EAL +++M S YS+LI +L+K + +A F+ M+ +G
Sbjct: 643 LIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNEG 702
Query: 402 VV--PNVLTYNTMIS 414
+ P+V ++ IS
Sbjct: 703 LTAEPDVYSFYMDIS 717
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 100/206 (48%)
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
++ D + E P V+TY ++H ++ A+K+ ++M + + + Y+S+I
Sbjct: 270 RLKDACQHFDEMSSPPDVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVI 329
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+L G+V DA + EDM GV + + + T+IS C++ + A +L ++M++
Sbjct: 330 ALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLA 389
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
D T+ L+ CR +K + +L M + +D TY L+ G + G + A
Sbjct: 390 ADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRV 449
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKK 524
EM+ + + P TY L + L K+
Sbjct: 450 HNEMVGRRVAPNVVTYTALSDGLCKQ 475
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 160/316 (50%), Gaps = 1/316 (0%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDC 261
++R V+ + ++ + F+ +++ G A + L+ LVK V+ A++V+ E +
Sbjct: 121 LIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSG 180
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
I L+ NI+++ CK K+DD + + +M Q+G D+V+Y I YCRE +
Sbjct: 181 IELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAF 240
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ + M KG KP++ TY V++ L K + A V+ +M S PDT+ Y++L+
Sbjct: 241 EVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVES 300
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+ +A +IF DM +GV P++++++++I + + AL + M+ PD
Sbjct: 301 CRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDN 360
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
Y L+ CR M + M + ++D Y +++ GL + L A + F+E
Sbjct: 361 VIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDE 420
Query: 502 MISKGIVPYHSTYKML 517
M+ +G+VP T+ L
Sbjct: 421 MVERGVVPDFCTFTTL 436
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 125/521 (23%), Positives = 237/521 (45%), Gaps = 49/521 (9%)
Query: 16 LQKHAKIYYLCYLSCNPLCTTAESPSSTESPSLPSWIKFF----DSQSPDEDFV--IPSL 69
LQ H ++Y + ++ +PS I++ + Q+P+++ P
Sbjct: 16 LQTHKQLYVI---------------ATIRNPSEECIIRYLHTLENCQNPNQEPTSSAPPD 60
Query: 70 AGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL----KGCGVS- 124
+ VE LN + R+ S+ LS+ I +++ + S ++VE+L CGV
Sbjct: 61 SFLVEKILLNLR-RVRSKRLSDAQTL----ILRMIRRSGVSRVEIVESLISMSSTCGVDN 115
Query: 125 -VSNSLVEQTLR-RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
V + L+ ++ R N+ T F + G++ + N+++ L K L WE
Sbjct: 116 LVFDLLIRSYVQARKLNEGTDTFKILR----RKGFLVSINACNSLLGGLVKMGWVDLAWE 171
Query: 183 LVKEMD----ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVL 238
+ E+ ELN + T++ ++ L + + DD M++ G+ D + L
Sbjct: 172 VYNEIARSGIELN-----VYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTL 226
Query: 239 MDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
++ + + A++V + K P + +N +I+G CK + A+ EM G
Sbjct: 227 INAYCREGLLGEAFEVMNSMSGKGLKP-TLFTYNAVINGLCKKGRYVRAKGVFNEMLSIG 285
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
SPD +Y + CR +F + D +M +G P +I+++ ++ + +++AL
Sbjct: 286 LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQAL 345
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ MK+ +PD Y+ LI + G + +A EI + M +QG +V+ YNT+++
Sbjct: 346 MYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGL 405
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
C + +A L +M E PD T+ L+ C++ M L M + ++ D
Sbjct: 406 CKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDI 465
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
TY L+ G ++ ++E A + EMIS+ I P H +Y +L
Sbjct: 466 VTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAIL 506
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/326 (26%), Positives = 155/326 (47%), Gaps = 9/326 (2%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L + S+++ R G D A+ FR MK G+ D ++L++ + + A L
Sbjct: 325 LISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEA----L 380
Query: 257 EFKDCI-----PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
E +D + L +N +++G CK + + DA EM ++G PD ++T I +
Sbjct: 381 EIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGH 440
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C+E + K M +K KP ++TY I++ K ++ +A +++ +M S P+
Sbjct: 441 CKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNH 500
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y+ L+ G V +A ++++M ++G+ P ++T NT+I C + A + L K
Sbjct: 501 ISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGK 560
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M + PD TY L+ + + M FL+ M + D TY ++ G G+
Sbjct: 561 MISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGR 620
Query: 492 LELACSFFEEMISKGIVPYHSTYKML 517
++ A +MI +GI P STY L
Sbjct: 621 MQEAELILRKMIERGIDPDRSTYTTL 646
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 145/303 (47%), Gaps = 3/303 (0%)
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSS 266
R G +A+E M + G D A + +++ L K + A +F E + +P
Sbjct: 372 RNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVP-DF 430
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
F LIHG CK + A M Q+ PD+V+Y I+ +C+ + K ++ E
Sbjct: 431 CTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNE 490
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M + P+ I+Y I+++ ++EA +++++M P +++I ++G
Sbjct: 491 MISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGD 550
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ A+E M +GV P+ +TYNT+I+ + A L+ KME +PD TY
Sbjct: 551 LSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNV 610
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
+L CR+ RM+ +L M + + D TY +L+ G + L+ A F +EM+ +G
Sbjct: 611 ILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRG 670
Query: 507 IVP 509
VP
Sbjct: 671 FVP 673
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 137/284 (48%), Gaps = 14/284 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT+++ L K K L EM E G V T +T++ + G A+ F
Sbjct: 398 YNTILNGLCKKKLLADANALFDEMVE--RGVVPDFCTFTTLIHGHCKEGNMGKALSLFGI 455
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF------NILIHGW 276
M + ++ D ++L+D K +E A +++ E +S +IF IL++G+
Sbjct: 456 MTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEM-----ISRKIFPNHISYAILVNGY 510
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
C V +A + EM ++G P +V+ I+ YCR D K D+ L +M +G P
Sbjct: 511 CNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDS 570
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
ITY +++ K + +++A + KM++ PD Y+ ++ + GR+++A I
Sbjct: 571 ITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRK 630
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
M ++G+ P+ TY T+I+ ++ + A + +M + PD
Sbjct: 631 MIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 96/227 (42%), Gaps = 34/227 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDE------------LNNGYVSLATMSTIMRRLVRGG 211
YN ++D K+ + EL EM L NGY +L +S
Sbjct: 468 YNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVS---------- 517
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-----KDCIPLSS 266
EAFR + + K + V +T++KG EF + + S
Sbjct: 518 ------EAFRLWDEM-IRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDS 570
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+N LI+G+ K +D A + +M +G PDVV+Y + +CR+ ++ + L++
Sbjct: 571 ITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRK 630
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
M E+G P TYT +++ + EA + +++M +PD F
Sbjct: 631 MIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPDDDF 677
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 149 bits (377), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 178/365 (48%), Gaps = 2/365 (0%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YNT++D L K K L KEM E ++ T S+++ L GR+ DA
Sbjct: 53 IYNTIIDGLCKYKHMDDALNLFKEM-ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSD 111
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M + + D S L+D VK + A K++ E K I S ++ LI+G+C +
Sbjct: 112 MIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDR 171
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A++ + M + PDVV+Y I+ +C+ K + + +EM ++G + +TY I
Sbjct: 172 LDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNI 231
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L +A + A +++++M SD P+ Y++L+ L K G+++ A +FE +++
Sbjct: 232 LIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSK 291
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P + TYN MI C + E+ L + KPD Y ++ CRK + +
Sbjct: 292 MEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEAD 351
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M ++ ++G Y +L+R + G E + +EM S G ST ++ L
Sbjct: 352 ALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML 411
Query: 522 EKKRL 526
RL
Sbjct: 412 HDGRL 416
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 167/359 (46%), Gaps = 10/359 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDE--LNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
Y +V+ L K L + L+ +M++ L G + +TI+ L + DDA+ F+
Sbjct: 19 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVL---IYNTIIDGLCKYKHMDDALNLFK 75
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCK 278
M+ G+ + S L+ L A ++ +E K I F+ LI + K
Sbjct: 76 EMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK--INPDVFTFSALIDAFVK 133
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
K+ +A+K EM ++ P +V+Y+ I +C + + M K C P V+T
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ K K++ E ++V+ +M + +T Y+ LI L +AG A EIF++M
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
GV PN++TYNT++ C + E A+ + + ++ +P TY +++ C+ +++
Sbjct: 254 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVE 313
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L ++ V D Y +++ G G E A + F+EM G +P Y L
Sbjct: 314 DGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTL 372
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 135/255 (52%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ ++++G CK D A + +M Q P V+ Y I+ C+ K + KEM+
Sbjct: 19 YGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEME 78
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
KG +P+V+TY+ ++ L + ++A ++ M PD +S+LI K G++
Sbjct: 79 TKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLV 138
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A +++++M K+ + P+++TY+++I+ C + A ++ + M C PD TY L+
Sbjct: 139 EAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLI 198
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
K C+ KR++ + M + + + TY L++GL ++G ++A F+EM+S G+
Sbjct: 199 KGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVP 258
Query: 509 PYHSTYKMLEEKLEK 523
P TY L + L K
Sbjct: 259 PNIMTYNTLLDGLCK 273
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%)
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+ M KGC+P ++TY +V++ L K + A + KM+ P Y+++I L K
Sbjct: 4 IDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCK 63
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
+ DA +F++M+ +G+ PNV+TY+++IS C +A +LL M E PD T
Sbjct: 64 YKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFT 123
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
++ L+ ++ ++ L M K + TY+SL+ G +L+ A FE M+
Sbjct: 124 FSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 183
Query: 504 SKGIVPYHSTYKML 517
SK P TY L
Sbjct: 184 SKHCFPDVVTYNTL 197
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%)
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+ + ++M + C PD Y ++ L K G A + M++ + P VL YNT+I
Sbjct: 1 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C ++AL L ++ME +P+ TY+ L+ C R + LL+ M + ++ D
Sbjct: 61 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
T+++L+ ++ GKL A ++EM+ + I P TY L
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSL 162
>gi|357113487|ref|XP_003558534.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Brachypodium distachyon]
Length = 520
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 121/451 (26%), Positives = 210/451 (46%), Gaps = 16/451 (3%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFS---NDLTPAFGFFTW 150
+ D D + +I++ +P + AL + +S L++ L RF D A +
Sbjct: 38 DADADSVYRIVTGA-PTPSAMESALSTSSILLSAPLLDLVLSRFRFAHGDPLRALSLLSL 96
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A + G +P +T + VLG++++F MW+LV L V+ T ++ R+ +
Sbjct: 97 AVDRCGVAPSPFTLDTAIYVLGRARRFTHMWDLVHSYHRLCPDAVTARTAMVVLGRVAKI 156
Query: 211 GRYDDAVEAFRGMKKY-----GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS 265
+ V +FR + + G E + L+ TL + S+ A VF K ++
Sbjct: 157 CSVRETVASFRRLLRLFRGREGTES-ADLFNALLRTLCQEKSMSDARNVFHAHKYEFQVN 215
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
Q FNIL+ GW + +DA+ EM + G PD+V+Y I+ C+ +D K L
Sbjct: 216 RQTFNILLSGW---KTSEDAEAFFAEMRELGIDPDLVTYNSLIDCQCKNRDVEKAYKLLD 272
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM+EK P VITYT ++ LG Q ++A + ++M C PD Y++ I A
Sbjct: 273 EMREKEISPDVITYTSLIGGLGLIGQPDKARHLLKEMCELGCHPDVPAYNATIRNFVIAK 332
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
R+ DA + ++M +G++PN TYN + +A L ++M + C P+ ++
Sbjct: 333 RLGDAFALMDEMASKGLMPNATTYNLFFRFYYWAYDIGSAWLLYERMRSERCFPNTQSCM 392
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
++++C R ++ L + M N L L + GKLE A F +M+
Sbjct: 393 FIVRLCHRHGKVMQALELWSDMVGNGFGSFTLVSDVLFDLLCDEGKLEEAERCFHQMVEL 452
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
G P ++ ++ ++ L N +E I+KL
Sbjct: 453 GQKPSSVAFRRIKILMQ---LANREESISKL 480
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 109/255 (42%), Gaps = 36/255 (14%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNIL 272
+DA F M++ G++ D + L+D K VE AYK+ E ++ I + L
Sbjct: 230 EDAEAFFAEMRELGIDPDLVTYNSLIDCQCKNRDVEKAYKLLDEMREKEISPDVITYTSL 289
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I G + D A+ +KEM + G PDV +Y I ++ K + EM KG
Sbjct: 290 IGGLGLIGQPDKARHLLKEMCELGCHPDVPAYNATIRNFVIAKRLGDAFALMDEMASKGL 349
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P+ TY + A I A +YE+M+S+ C P+T ++ + + G+V A E
Sbjct: 350 MPNATTYNLFFRFYYWAYDIGSAWLLYERMRSERCFPNTQSCMFIVRLCHRHGKVMQALE 409
Query: 393 IFEDMKKQG-----VVPNVL---------------TYNTMI------SSACAR------- 419
++ DM G +V +VL ++ M+ SS R
Sbjct: 410 LWSDMVGNGFGSFTLVSDVLFDLLCDEGKLEEAERCFHQMVELGQKPSSVAFRRIKILMQ 469
Query: 420 --SEEENALKLLQKM 432
+ EE+ KL +KM
Sbjct: 470 LANREESISKLNEKM 484
>gi|357145431|ref|XP_003573640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80880,
mitochondrial-like [Brachypodium distachyon]
Length = 523
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 174/348 (50%), Gaps = 7/348 (2%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
E ++ + GK+ +F L W V+ M L+ G ++ M +M R + A++ F
Sbjct: 142 EAWHLAIWAAGKAGRFDLAWAAVRRM--LHRGVLTRRAMIIVMERYAAASELEKALKTFD 199
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCK-TR 280
M+K+ V+ D L+ L K ++E A ++ L K PL+++ FNI++ GWC
Sbjct: 200 VMEKFKVQADQAVFYSLLRALCKSKNIEDAEELLLMRKKFFPLTAEGFNIILDGWCNIII 259
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V +A++ KEM +PD SYT + + + + EM+++G P + Y
Sbjct: 260 DVAEAKRVWKEMSSYCITPDGTSYTLMVSCFSKVGNLFDTLRVYDEMKKRGWTPGIGVYN 319
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+++ L + + +A K++ K+ + + Y+S+I L ++ ++ +A + DM +
Sbjct: 320 SLVYVLTRENCMKDAKKIFSKIIDEGLQLNVETYNSMIIPLCESCKLDEARIMMGDMIMK 379
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+VP +LTY+ + + L+LL+KM+E+ C P+ +T+ L+ +
Sbjct: 380 GIVPTILTYHAFLKQEGV----DETLQLLRKMKENGCGPNSDTFLMLIDKFIQANESGNA 435
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ M + D+S Y ++++GL++ G + A +++EM +KG
Sbjct: 436 LRVWNEMIRYDISPAYSHYMAVIQGLVKHGCIPRALEYYDEMKAKGFA 483
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/390 (25%), Positives = 194/390 (49%), Gaps = 8/390 (2%)
Query: 131 EQTLRRFSNDLTP--AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD 188
E ++ N+ P A F Q G+ H Y +++ L K KKF + ++ +M
Sbjct: 51 ETAIKLIKNERDPQHALDIFNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMT 110
Query: 189 ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT-RALSVLMDTLVKGNS 247
+ V +M+ + ++ ++ F +K EK + +A+S ++ LV+ +
Sbjct: 111 -YDTCKVHEGIFLNLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDR 169
Query: 248 VEHAYKVFLEFKDCIPL--SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS-PDVVSY 304
V+ A K+ + + + L ++ IFNIL+ C+ + A + +KEM S P++V+Y
Sbjct: 170 VDLARKLLVNARSKLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTY 229
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEK-GCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
+ I C ++ + +EM K P +TY I+++ + +++ A + E MK
Sbjct: 230 STLIGGLCENGKLKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMK 289
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
S+ C P+ YS L+ K GR+++A E+F ++K G+ P+ ++Y T+I+ C +
Sbjct: 290 SNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVD 349
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A +LLQ+M++ C+ D T+ +L CR+ R ++ + ++ G+Y ++
Sbjct: 350 EATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVL 409
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHST 513
L + G+L A M+++G VP+H+T
Sbjct: 410 NFLTQKGELRKATELLGLMLNRGFVPHHAT 439
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 162/313 (51%), Gaps = 8/313 (2%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N +V ++ +E+VKEM Y +L T ST++ L G+ +A+E F
Sbjct: 192 IFNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEE 251
Query: 223 M-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN--ILIHGWCKT 279
M K + D ++L++ + V+ A + LEF S +FN +L++G+CK
Sbjct: 252 MVSKDNILPDALTYNILINGFCQRGKVDRA-RTILEFMKSNGCSPNVFNYSVLMNGYCKE 310
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++ +A++ E+ G PD +SYT I CR + + L++M++K C+ +T+
Sbjct: 311 GRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTF 370
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+++ L + + +EAL + +K+ + + Y ++ L++ G ++ A E+ M
Sbjct: 371 NVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLN 430
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-- 457
+G VP+ T NT++ C ++A++ L + E KP+ E++ L+ + CR+++M
Sbjct: 431 RGFVPHHATSNTLLLLLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLICRERKMLP 490
Query: 458 --KVLNFLLTHMF 468
++L+ L+T +
Sbjct: 491 VFELLDVLVTQEY 503
>gi|357159149|ref|XP_003578355.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Brachypodium distachyon]
Length = 857
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 159/315 (50%), Gaps = 5/315 (1%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
+D T A GFF W K Q G+ H Y TM+ +LG++++F +M L+ EM+ + ++
Sbjct: 342 HDHTMALGFFHWLKRQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNR-DRCKPTVV 400
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + I+ R +AV+ F M++ G E D L+D K +E A ++
Sbjct: 401 TYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRM 460
Query: 259 KDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
++ + LS F + +++ K ++ A K EM + G +P++V+Y I + ++
Sbjct: 461 QE-VGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARN 519
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ V ++MQ G +P ITY+IVM LG ++EA V+ +M+ D PD Y
Sbjct: 520 YDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGL 578
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ + KAG V A + M + G+ PNV T N+++S+ + ++A +LQ M
Sbjct: 579 LVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQG 638
Query: 437 CKPDCETYAPLLKMC 451
P +TY LL C
Sbjct: 639 LVPSLQTYTLLLSCC 653
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 113/224 (50%), Gaps = 1/224 (0%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q GF D +YT I + + F + + L EM CKP+V+TY ++HA G+A +
Sbjct: 357 QPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLR 416
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EA+KV+E+M+ PD Y +LI I +KAG ++ A +++ M++ G+ P+ TY+ M+
Sbjct: 417 EAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMV 476
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ + A KL +M E+ C P+ TY ++ + + + + L M
Sbjct: 477 NCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQVAGFR 536
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
D TY+ ++ L G L+ A + F EM + P Y +L
Sbjct: 537 PDKITYSIVMEVLGHCGHLDEAEAVFIEM-RRDWAPDEPVYGLL 579
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 125/252 (49%), Gaps = 7/252 (2%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N +IH + + + +A K +EM + G+ PD V+Y I+ + + D MQ
Sbjct: 402 YNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQ 461
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E G P TY+ +++ LGK Q+ A K++ +M + C P+ Y+ +I + +KA
Sbjct: 462 EVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYD 521
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMIS--SACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ +++ DM+ G P+ +TY+ ++ C +E A+ + +M D PD Y
Sbjct: 522 NVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFI--EMRRDWA-PDEPVYGL 578
Query: 447 LLKMCCRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ + + + K L + M ++ + + T SL+ ++ + + A S + M+++
Sbjct: 579 LVDLWGKAGNVDKALGWYHA-MLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQ 637
Query: 506 GIVPYHSTYKML 517
G+VP TY +L
Sbjct: 638 GLVPSLQTYTLL 649
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 125/264 (47%), Gaps = 2/264 (0%)
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ R+ + + EM + P VV+Y I Y R R+ +EM+E G +P +
Sbjct: 376 QARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYLREAVKVFEEMEEAGYEPDRV 435
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++ KA + A+ +Y +M+ PDT YS+++ L K G++ A ++F +M
Sbjct: 436 TYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEM 495
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ G PN++TYN +I+ +N +KL + M+ +PD TY+ ++++ +
Sbjct: 496 IENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQVAGFRPDKITYSIVMEVLGHCGHL 555
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST-YKM 516
+ M + D + D Y LV ++G ++ A ++ M+ G+ P T +
Sbjct: 556 DEAEAVFIEM-RRDWAPDEPVYGLLVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSL 614
Query: 517 LEEKLEKKRLGNAKERINKLLAHA 540
L L+ R +A + +LA
Sbjct: 615 LSAFLKINRFQDAYSVLQNMLAQG 638
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/275 (23%), Positives = 116/275 (42%), Gaps = 34/275 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ MV+ LGK + ++L EM E N +L T + I+ + YD+ V+ +R M
Sbjct: 472 YSAMVNCLGKGGQLAAAYKLFCEMIE-NGCTPNLVTYNIIIALQAKARNYDNVVKLYRDM 530
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
+ G D S++M+ L ++ A VF+E + ++ +L+ W K VD
Sbjct: 531 QVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRRDWAPDEPVYGLLVDLWGKAGNVD 590
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A M Q G P+V + + + + F+ L+ M +G PS+ TYT+++
Sbjct: 591 KALGWYHAMLQDGLQPNVPTCNSLLSAFLKINRFQDAYSVLQNMLAQGLVPSLQTYTLLL 650
Query: 344 ------HA----------------------LGKAKQINEALKVYEK-----MKSDDCLPD 370
HA L A+ E ++ + + M S+D
Sbjct: 651 SCCTDAHAQMGLCCQLMAITGHPAHMFLLYLPDAEPGGENVRDHTRYFLDMMHSEDRESK 710
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
++I L K+G ++A I+E ++ V P+
Sbjct: 711 RGLMDAVIDFLHKSGLKEEAGFIWEVAAQKNVYPD 745
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 90/194 (46%)
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++ G K TYT ++ LG+A+Q + +M D C P Y+ +I +A +
Sbjct: 356 RQPGFKHDGHTYTTMIGILGQARQFGIMRNLLHEMNRDRCKPTVVTYNRIIHAYGRANYL 415
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
++A ++FE+M++ G P+ +TY T+I E A+ L +M+E PD TY+ +
Sbjct: 416 REAVKVFEEMEEAGYEPDRVTYCTLIDIHAKAGYLEVAMDLYGRMQEVGLSPDTFTYSAM 475
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + ++ L M +N + + TY ++ ++ + + +M G
Sbjct: 476 VNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQVAGF 535
Query: 508 VPYHSTYKMLEEKL 521
P TY ++ E L
Sbjct: 536 RPDKITYSIVMEVL 549
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 117/470 (24%), Positives = 215/470 (45%), Gaps = 53/470 (11%)
Query: 114 VVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGK 173
VV AL+GC + S+ L + + F+ WA G+ HT +N +++L K
Sbjct: 64 VVAALRGCKGRLHPSVAAAILAQLDGNAELGTQFYDWAAALPGFKHTIFSFNKYLNLLVK 123
Query: 174 SKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVR-GGRYDDAVEAFRGMKKYGVE 229
S +L + N + T ST++R + GG + + FR ++
Sbjct: 124 SGSPAKAIDLFRSRLPPRCRPNHF----TYSTLLRATYKAGGDVERTLGFFRRIRSS--S 177
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
+ ++++ +L + A ++F +D + + +N +I+G CK+ ++ +
Sbjct: 178 RSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGME 237
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+E+ ++G PDVV+Y I+ C+ D + +M + C P+V+TY+++++ L
Sbjct: 238 LFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLC 297
Query: 348 KAKQINEALKVYEKM--KSDDCL------------------------------------- 368
K +I+EA ++ ++M KS D L
Sbjct: 298 KVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVS 357
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
PDT +S+LI L K G++ +A +F+DM G VPNV+TYN +++ C + E A +
Sbjct: 358 PDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAM 417
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
++ M + PD TY+ L+ C+ R+ LL M + + T+ S++ GL +
Sbjct: 418 IESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCK 477
Query: 489 SGKLELACSFFEEMISK-GIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
S + A F++M K G+VP TY L + L R G A+ ++ +
Sbjct: 478 SDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM 527
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 109/379 (28%), Positives = 183/379 (48%), Gaps = 20/379 (5%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
TP + +N+++D L KS + +++ +M L +G V T T++ L R GR A
Sbjct: 462 TPNVVTFNSIIDGLCKSDRSGEAFQMFDDM-ALKHGLVPDKITYCTLIDGLFRTGRAGQA 520
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILI 273
M + DT A + ++ L K V A +V+ LE + +P FNILI
Sbjct: 521 EALLDAMP----DPDTYAFNCCINGLSKLGDVSRALQVYNRMLEL-ELVP-DKVTFNILI 574
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G CK + A +EM + PDV+++ I+ C+ D L M G
Sbjct: 575 AGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVP 634
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+V+TY ++H L K+ +I EA + E+M S C+PD+ Y SL++ L +A R DA ++
Sbjct: 635 PNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQL 694
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
++K G P+ +TYN ++ + E A+ +L++M PD TY L+ C+
Sbjct: 695 VSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCK 754
Query: 454 KKRMKVLNFLLTHMFKNDVSM----DAGTYASLVRGLIESGKLELACSFFEEMISKG--I 507
++ L M + VS + TY+ L+ GL + G+++ A +EM+ K +
Sbjct: 755 AGDLEEARRLHGDM-SSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDV 813
Query: 508 VPYHSTYKMLEEKLEKKRL 526
+P TY + L K+ +
Sbjct: 814 LPNIITYNSFLDGLCKQSM 832
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 109/395 (27%), Positives = 189/395 (47%), Gaps = 25/395 (6%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
H P++ YNT++D L K+ L +M + ++ T S ++ L + GR D+A
Sbjct: 247 HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSS-RSCVPNVVTYSVLINGLCKVGRIDEA 305
Query: 217 VEAFRGM--KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC---IPLSSQIFNI 271
E + M K V + + +D L K + A ++ +D + + F+
Sbjct: 306 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 365
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G CK ++D+A +M G+ P+V++Y + C+ + ++ M +KG
Sbjct: 366 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P VITY++++ A KA +++EAL++ M S C P+ ++S+I L K+ R +A
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 485
Query: 392 EIFEDMK-KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA----- 445
++F+DM K G+VP+ +TY T+I A LL M PD +TYA
Sbjct: 486 QMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAM------PDPDTYAFNCCI 539
Query: 446 -PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L K+ + ++V N M + ++ D T+ L+ G ++G E A + FEEM++
Sbjct: 540 NGLSKLGDVSRALQVYN----RMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVA 595
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
K + P T+ L + L K A I L+ +
Sbjct: 596 KNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 630
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 186/388 (47%), Gaps = 21/388 (5%)
Query: 148 FTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMD-ELNNGYV-SLATMSTI 203
T + G H P++ YNT++D L K+ L +M ++ V ++ T S +
Sbjct: 727 ITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVL 786
Query: 204 MRRLVRGGRYDDAVEAFRGM--KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
+ L + GR D+A E + M K V + + +D L K + + A ++ +D
Sbjct: 787 INGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDG 846
Query: 262 ---IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
+ + F+ LI G CK + D+A +M G+ P+VV+Y + C+
Sbjct: 847 SLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKME 906
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ ++ M +KG P VITY++++ A KA ++EAL++ M S C P+ ++S+I
Sbjct: 907 RAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSII 966
Query: 379 FILSKAGRVKDANEIFEDMK-KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
L K+ + +A ++F+DM K G+ P+ +TY T+I A LL M
Sbjct: 967 DGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM----- 1021
Query: 438 KPDCETYAPLLKMCCRKKRMKV--LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
PD +TYA CC K+ ++ L M + ++ D T+ L+ G ++G E A
Sbjct: 1022 -PDPDTYA---FNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQA 1077
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ FEEM++K + P T+ L + L K
Sbjct: 1078 SALFEEMVAKNLQPDVMTFGALIDGLCK 1105
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 136/298 (45%), Gaps = 45/298 (15%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA----TMSTIMRRLVRGGRYDDAVEA 219
YN+ +D L K +M E + M L +G + ++ T ST++ L + G+ D+A
Sbjct: 820 YNSFLDGLCKQS---MMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNV 876
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCK 278
F M G + +VLM+ L K + +E A+ + D + +++L+ +CK
Sbjct: 877 FDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 936
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE----KDFRKVDD-TLKEMQEKGCK 333
VD+A + + M +G +P+VV++ I+ C+ + F+ DD TLK G
Sbjct: 937 ASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKH----GLA 992
Query: 334 PSVITYTIVMHAL------GKAKQINEAL----------------------KVYEKMKSD 365
P ITY ++ L G+A+ + +A+ + +M
Sbjct: 993 PDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLEL 1052
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
+ +PD ++ LI KAG + A+ +FE+M + + P+V+T+ +I C + E
Sbjct: 1053 ELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 90/228 (39%), Gaps = 33/228 (14%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYD 214
GY+ YN +++ L K+ K +++ M ++ G + T S ++ + D
Sbjct: 884 GYVPNVVTYNVLMNGLCKTDKMERAHAMIESM--VDKGVTPDVITYSVLVDAFCKASHVD 941
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-------DCIPLSSQ 267
+A+E GM G + + ++D L K + A+++F + D I +
Sbjct: 942 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTL 1001
Query: 268 IFNILIHGWCKT-----------------------RKVDDAQKAMKEMFQQGFSPDVVSY 304
I + GW K+ D +A+ M + PD V++
Sbjct: 1002 IDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTF 1061
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQI 352
I C+ +F + +EM K +P V+T+ ++ L KA Q+
Sbjct: 1062 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQV 1109
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/366 (27%), Positives = 177/366 (48%), Gaps = 2/366 (0%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+TG+ Y ++ V+ KS + L EL+++M+E + S I+ L + G
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE-RKIKLDAVKYSIIIDGLCKDGS 262
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNI 271
D+A F M+ G + D + L+ + K+ + K I F+
Sbjct: 263 LDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI + K K+ +A++ KEM Q+G SPD V+YT I+ +C+E K + L M KG
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C P++ T+ I+++ KA I++ L+++ KM + DT Y++LI + G+++ A
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
E+F++M + V P++++Y ++ C E E AL++ +K+E+ + D Y ++
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C ++ L + V D TY ++ GL + G L A F +M G P
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562
Query: 512 STYKML 517
TY +L
Sbjct: 563 CTYNIL 568
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/394 (25%), Positives = 176/394 (44%), Gaps = 37/394 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
++ + V+ ++K++ L+ +L K+M EL +L T+S ++ R + A A +
Sbjct: 75 FSRLFSVVARTKQYDLVLDLCKQM-ELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKI 133
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
K G E DT S L++ L V A ++ + + I N L++G C KV
Sbjct: 134 IKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKV 193
Query: 283 DDAQKAMKEMFQQGFSP-----------------------------------DVVSYTCF 307
DA + M + GF P D V Y+
Sbjct: 194 SDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSII 253
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I+ C++ + EM+ KG K +I YT ++ A + ++ K+ M
Sbjct: 254 IDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
PD +S+LI K G++++A E+ ++M ++G+ P+ +TY ++I C ++ + A
Sbjct: 314 TPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANH 373
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+L M C P+ T+ L+ C+ + L M V D TY +L++G
Sbjct: 374 MLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFC 433
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
E GKLE+A F+EM+S+ + P +YK+L + L
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 143/323 (44%), Gaps = 39/323 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++D L K + L EM E+ + +T++R GR+DD + R M
Sbjct: 250 YSIIIDGLCKDGSLDNAFNLFNEM-EIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDM 308
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF------------------------- 258
K + D A S L+D VK + A ++ E
Sbjct: 309 IKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQL 368
Query: 259 ------------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
K C P + + FNILI+G+CK +DD + ++M +G D V+Y
Sbjct: 369 DKANHMLDLMVSKGCGP-NIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNT 427
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I+ +C + +EM + +P +++Y I++ L + +AL+++EK++
Sbjct: 428 LIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSK 487
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
D Y+ +I + A +V DA ++F + +GV P+V TYN MI C + A
Sbjct: 488 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEAD 547
Query: 427 KLLQKMEEDLCKPDCETYAPLLK 449
L +KMEED P+ TY L++
Sbjct: 548 LLFRKMEEDGHSPNGCTYNILIR 570
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 117/226 (51%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA +EM + P ++ ++ R K + V D K+M+ KG ++ T +
Sbjct: 52 KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + ++++ A K+ PDT +S+LI L GRV +A E+ + M +
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P ++T N +++ C + +A+ L+ +M E +P+ TY P+LK+ C+ + +
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
LL M + + +DA Y+ ++ GL + G L+ A + F EM KG
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 176/377 (46%), Gaps = 11/377 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+V + + L+ M + Y T + ++R L GR DA+ M
Sbjct: 108 YNTLVAGYCRYGRLDAARRLIASMPVPPDAY----TYTPLIRGLCDRGRVGDALSLLDDM 163
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ + +VL++ + K + A KV E K C P + +N++I+G C+ +
Sbjct: 164 LRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTP-NIVTYNVIINGMCREDR 222
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VDDA++ + + GF PD VSYT ++ C K + V+ EM E C P+ +T+ +
Sbjct: 223 VDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDM 282
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + + A++V ++M C +T+ + +I + K GRV DA E +M G
Sbjct: 283 LVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYG 342
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+ ++Y T++ C E+A +LL +M C P+ T+ + + C+K +
Sbjct: 343 CSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAI 402
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ M + S+ TY +LV G G+++ A F + + P TY L L
Sbjct: 403 LLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGL 459
Query: 522 -EKKRLGNAKERINKLL 537
+RL A E + +++
Sbjct: 460 CHAERLDAAAELLAEMM 476
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 170/352 (48%), Gaps = 17/352 (4%)
Query: 182 ELVKEMDELNNGYVSLATMSTI-MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
E++ M E +G + T+ I + + + GR DDA E M YG DT + + ++
Sbjct: 298 EVLDRMSE--HGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLK 355
Query: 241 TLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
L + E A ++ E K+C P + FN I C+ +D A +++M + G S
Sbjct: 356 GLCRAGRWEDAKELLNEMVRKNCPP-NEVTFNTFICILCQKGLIDQAILLIEQMPEYGCS 414
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
+V+Y + +C + +VD L+ C+P+ ITYT ++ L A++++ A ++
Sbjct: 415 VGIVTYNALVNGFCVQG---RVDSALELFNSLPCEPNTITYTTLLTGLCHAERLDAAAEL 471
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+M +DC + ++ L+ + G V++A E+ + M + G PN++T+NT++
Sbjct: 472 LAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITE 531
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK--NDVSM-- 474
E AL+LL + D TY+ ++ + R+ R++ MF D+ M
Sbjct: 532 DCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEA----VQMFHAVQDMGMRP 587
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
A Y ++ L + + + A FF M+S +P STY +L E L ++ L
Sbjct: 588 KAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGL 639
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 176/399 (44%), Gaps = 44/399 (11%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFR 221
Y +++ + KS F + +K +DE+ + + T + I+ + R R DDA +
Sbjct: 175 YTVLLEAVCKSSGF---GQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILN 231
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIP---------------- 263
+ YG + DT + + ++ L E +F E +C+P
Sbjct: 232 RLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGG 291
Query: 264 ------------------LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
++ + NI+I+ CK +VDDA + + M G SPD +SYT
Sbjct: 292 MVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYT 351
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
++ CR + + L EM K C P+ +T+ + L + I++A+ + E+M
Sbjct: 352 TVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEY 411
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
C Y++L+ GRV A E+F + + PN +TY T+++ C + A
Sbjct: 412 GCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAA 468
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
+LL +M ++ C + T+ L+ C+K ++ L+ M ++ + + T+ +L+ G
Sbjct: 469 AELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDG 528
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ E E A ++SKGI TY + + L ++
Sbjct: 529 ITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSRE 567
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 159/332 (47%), Gaps = 15/332 (4%)
Query: 148 FTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEM-DEL--NNGYVSLATMST 202
F + Y +P+ Y T++ L ++ + WE KE+ +E+ N + T +T
Sbjct: 332 FEFLNNMGSYGCSPDTISYTTVLKGLCRAGR----WEDAKELLNEMVRKNCPPNEVTFNT 387
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
+ L + G D A+ M +YG V + LV G V+ LE + +
Sbjct: 388 FICILCQKGLIDQAILLIEQMPEYGCSVGI----VTYNALVNGFCVQGRVDSALELFNSL 443
Query: 263 PL--SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P ++ + L+ G C ++D A + + EM Q +VV++ + +C++ +
Sbjct: 444 PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEA 503
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+ +++M E GC P++IT+ ++ + + EAL++ + S DT YSS++ +
Sbjct: 504 IELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDV 563
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
LS+ R+++A ++F ++ G+ P + YN ++S+ C R E + A+ M + C P+
Sbjct: 564 LSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPN 623
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
TY L++ R+ +K ++L+ + V
Sbjct: 624 ESTYVILIEGLAREGLLKEARYVLSELCSRGV 655
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 111/238 (46%), Gaps = 11/238 (4%)
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+A + ++ +G +PDV T I + CR L+ + G V Y ++
Sbjct: 53 EAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLV 112
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ +++ A ++ M PD Y+ LI L GRV DA + +DM ++
Sbjct: 113 AGYCRYGRLDAARRLIASMPVP---PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQ 169
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM----KV 459
P+V+TY ++ + C S A+K+L +M C P+ TY ++ CR+ R+ ++
Sbjct: 170 PSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQI 229
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LN L ++ F+ D +Y ++++GL + + E F EM+ VP T+ ML
Sbjct: 230 LNRLSSYGFQPDTV----SYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDML 283
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 120/277 (43%), Gaps = 42/277 (15%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT + +L + L+++M E V + T + ++ GR D A+E F +
Sbjct: 385 FNTFICILCQKGLIDQAILLIEQMPEYGCS-VGIVTYNALVNGFCVQGRVDSALELFNSL 443
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
E +T + L+ L ++ A ++ E DC PL+ FN+L+ +C+
Sbjct: 444 P---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDC-PLNVVTFNVLVSFFCQKGF 499
Query: 282 VDDAQKAMKEMFQQGFSP-----------------------------------DVVSYTC 306
V++A + +++M + G +P D ++Y+
Sbjct: 500 VEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSS 559
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
++ RE + +Q+ G +P + Y ++ AL K + + A+ + M S+
Sbjct: 560 IVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNS 619
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
C+P+ S Y LI L++ G +K+A + ++ +GV+
Sbjct: 620 CMPNESTYVILIEGLAREGLLKEARYVLSELCSRGVL 656
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+ EA ++ E+ S PD + LI L + GR DA + + G +V YNT
Sbjct: 51 LAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNT 110
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+++ C + A +L+ M PD TY PL++ C + R+ LL M + +
Sbjct: 111 LVAGYCRYGRLDAARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRE 167
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAK 530
TY L+ + +S A +EM +KG P TY ++ + + R+ +A+
Sbjct: 168 CQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDAR 227
Query: 531 ERINKLLAHAKEQKT 545
+ +N+L ++ + T
Sbjct: 228 QILNRLSSYGFQPDT 242
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 177/378 (46%), Gaps = 37/378 (9%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
A FF PE+Y +M+D+L K F L L+ EM + + +S + +
Sbjct: 117 ALAFFNHVLPSLPTDSLPELYASMMDLLAKHHHFPLARHLLDEMRK-RSIPISSQVILAL 175
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
+RR VR G +A + FR M++YG G + A
Sbjct: 176 IRRYVRAGMSSEASDLFRSMEEYG-----------------GGVPDPA------------ 206
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ L+ K R +AQ A+ + ++ F+PDVV YT + +CR K +
Sbjct: 207 ----VLASLLGALSKKRLASEAQ-ALFDSYKSVFTPDVVLYTTLVHAWCRSGCLDKAEQV 261
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
EMQ+ G P+V TYT V+ A+ +A Q+ A ++ +M C P+T+ +++++ K
Sbjct: 262 FAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMIDSGCPPNTATFNAIMRAHVK 321
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE--ENALKLLQKMEEDLCKPDC 441
AGR + ++ M++ G P+++TYN ++ + C + + + A+KLL KM C PDC
Sbjct: 322 AGRSEQVLQVHNQMRQLGCDPDIITYNFLMETHCGKGQSNLDAAMKLLLKMIAKGCTPDC 381
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
T+ P+LK+ + + L M + + TY L++ + +++ ++
Sbjct: 382 HTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYNLLMKLFGKDKSMDMVLRIKKD 441
Query: 502 MISKGIVPYHSTYKMLEE 519
M ++G+ P +TY L E
Sbjct: 442 MDAQGVEPNVNTYGALIE 459
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/406 (24%), Positives = 201/406 (49%), Gaps = 10/406 (2%)
Query: 91 ENHETDVDKISKILSKQYQSPDKVVEAL--KGCGVSVSNSLVEQTLRRFSNDLTPAFGFF 148
+ + + +DK+S+ ++ + + ++ L + + + +R + P
Sbjct: 50 DTYHSIIDKLSR--ARAFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRPRLALK 107
Query: 149 TWAKTQTGYMHTP--EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
T+ + + + P ++ NT+++V ++K++ L+ +K + ++ + + +++
Sbjct: 108 TFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKA 167
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPL 264
L + ++A++ F M G+ + + ++ V + +A KVF E D +P
Sbjct: 168 LCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLP- 226
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ + +L+ G+CK ++ DA K M M G P+ V+Y I+ YC+EK + + +
Sbjct: 227 DATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLI 286
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+M +K PS V+ L + ++ A ++++M +CLPD + S+LI L K
Sbjct: 287 DDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKE 346
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G+V +A ++F++ + QG +P+++TYNT+I+ C R E A +L M E C+P+ TY
Sbjct: 347 GKVWEARKLFDEFE-QGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTY 405
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
L+K + +K +L M N + TY L+ GL ESG
Sbjct: 406 NMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESG 451
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 185/403 (45%), Gaps = 10/403 (2%)
Query: 140 DLTPAFGFFTWA-KTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
+L AF F +A K G+ HT + Y++++D L +++ F + L+ ++ N+ ++
Sbjct: 27 NLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRARAFDGVESLLSQLSR-NSSHIKCG 85
Query: 199 --TMSTIMRRLVRGGRYDDAVEAFRGMKK-YGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+++R GR A++ F +K+ + ++ + L+ L++ V+
Sbjct: 86 DDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVKLLNTLLNVFVQNKRYHLVGSTL 145
Query: 256 LEFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
KD + +F NILI CK V++A K EM G P++V+YT + +
Sbjct: 146 KNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDEMPTMGMIPNLVTYTTILGGFVS 205
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D + E+ +KG P TYT++M K ++++A+KV + M+ + P+
Sbjct: 206 RGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVT 265
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y +I K + +A + +DM + +P+ +I C + ENA L ++M
Sbjct: 266 YGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRML 325
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E C PD + L+ C++ ++ L F+ TY +L+ G+ E G+L
Sbjct: 326 EKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDE-FEQGTIPSLMTYNTLIAGMCERGELN 384
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
A +++M+ K P TY ML + K G KE + L
Sbjct: 385 EAGRLWDDMVEKRCRPNAFTYNMLIKGFMKA--GVVKEGVRIL 425
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 109/243 (44%), Gaps = 42/243 (17%)
Query: 191 NNGYVSLATMSTI-MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD--------- 240
+ G++ AT T+ M + GR DA++ M+ GVE + V++D
Sbjct: 221 DKGWLPDATTYTVLMVGYCKQGRLSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSG 280
Query: 241 --------------------------TLVKGNSVE---HAYKVFLEFKDCIPLSSQIFNI 271
L + VE H +K LE K+C+P + I +
Sbjct: 281 EARNLIDDMLDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKRMLE-KNCLP-DNAIMST 338
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LIH CK KV +A+K E F+QG P +++Y I C + + +M EK
Sbjct: 339 LIHWLCKEGKVWEARKLFDE-FEQGTIPSLMTYNTLIAGMCERGELNEAGRLWDDMVEKR 397
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C+P+ TY +++ KA + E +++ E+M + CLP+ S Y+ LI L ++G D +
Sbjct: 398 CRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLLIEGLQESGMEGDVD 457
Query: 392 EIF 394
++
Sbjct: 458 KVM 460
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 94/196 (47%), Gaps = 3/196 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST-IMRRLVRGGRYDDAVEAFRG 222
Y M+D K KK L+ +M L+ ++ +T+ ++ L G+ ++A ++
Sbjct: 266 YGVMIDAYCKEKKSGEARNLIDDM--LDKKFLPSSTLCCKVIDVLCEDGKVENACHLWKR 323
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
M + D +S L+ L K V A K+F EF+ S +N LI G C+ ++
Sbjct: 324 MLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGTIPSLMTYNTLIAGMCERGEL 383
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
++A + +M ++ P+ +Y I+ + + ++ L+EM + GC P+ TYT++
Sbjct: 384 NEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGVRILEEMLDNGCLPNKSTYTLL 443
Query: 343 MHALGKAKQINEALKV 358
+ L ++ + KV
Sbjct: 444 IEGLQESGMEGDVDKV 459
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 171/357 (47%), Gaps = 6/357 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y +V+ LGK+ + M L G ++ T + +M + G+ D A+ F
Sbjct: 138 YGFLVNALGKAGRVQEARSFFDAM--LERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAE 195
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
MK+ G + ++L+D L V A K+F + C P S ++ L++G K+
Sbjct: 196 MKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSP-DSYTYSTLVNGLGKSG 254
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+V++A K +EM +G + D+V+Y + + + +V +KEM KG P ++
Sbjct: 255 RVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFN 314
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+M ALGKA + + A +V+ +M C PD Y+ LI ++ G A ++ E+M +
Sbjct: 315 TIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEA 374
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G +P TYN++I + + A +L++ME C+PD TY L+ M ++ +
Sbjct: 375 GFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRA 434
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M V D +YA + GL +L+ A F++M + G + Y++L
Sbjct: 435 ARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRIL 491
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 165/346 (47%), Gaps = 8/346 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LE 257
+ ++R R G+ D A+E FR MK G E D L++ L K V+ A F LE
Sbjct: 104 NVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLE 163
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ P + +N+L+ + K ++D A EM ++GF P VV+Y ++ C
Sbjct: 164 -RGLTP-NIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRV 221
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+M GC P TY+ +++ LGK+ ++ EA KV+ +M D Y+SL
Sbjct: 222 GAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSL 281
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ L+KAG + ++ ++M ++G P+ ++NT++ + ++ + A ++ +M E C
Sbjct: 282 LATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGC 341
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KPD +Y L+ R +L M + + TY SL+ L G+++ A +
Sbjct: 342 KPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFA 401
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
EEM + G P TY L + L K+ +R +L K++
Sbjct: 402 VLEEMETAGCRPDVVTYNRLMDMLGKR---GENQRAARLFQQMKDK 444
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 146/314 (46%), Gaps = 3/314 (0%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
L A G F K + G+ + YN ++D L + + +L +M S T
Sbjct: 186 LDMALGLFAEMKRR-GFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSY-TY 243
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-K 259
ST++ L + GR ++A + FR M GV D + L+ TL K +++ +K+ E +
Sbjct: 244 STLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSR 303
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ FN ++ K K D A++ M + G PD++SY I+ Y R D +
Sbjct: 304 KGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQ 363
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
L+EM E G P TY ++H L Q++EA V E+M++ C PD Y+ L+
Sbjct: 364 ARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMD 423
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+L K G + A +F+ MK +GV P+ L+Y I + AL L + M+ C
Sbjct: 424 MLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPV 483
Query: 440 DCETYAPLLKMCCR 453
D Y L++ R
Sbjct: 484 DKAMYRILIRAAHR 497
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 82/356 (23%), Positives = 157/356 (44%), Gaps = 38/356 (10%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T+ ++ RG + DA + F + + A + L+D LV E A V+ L
Sbjct: 32 TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKL 91
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKE------------------------- 291
K C L +N+LI + ++ ++D A + +E
Sbjct: 92 VQKGC-QLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGR 150
Query: 292 ----------MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
M ++G +P++ +Y ++ + + EM+ +G +PSV+TY I
Sbjct: 151 VQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ AL A ++ A K++ KM D C PD+ YS+L+ L K+GRV++A+++F +M +G
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V +++ YN+++++ + KL+++M PD ++ ++ + +
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ M ++ D +Y L+ G A EEM+ G +P TY L
Sbjct: 331 EVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSL 386
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 3/275 (1%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
PL LI + + K DA + SP V ++T I+ +F + +
Sbjct: 27 PLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAEL 86
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
K++ +KGC+ Y +++ G++ Q++ A++++ +MK PD Y L+ L
Sbjct: 87 VYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALG 146
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
KAGRV++A F+ M ++G+ PN+ TYN ++ + + + AL L +M+ +P
Sbjct: 147 KAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVV 206
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY LL C R+ L M + S D+ TY++LV GL +SG++E A F EM
Sbjct: 207 TYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREM 266
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
+ +G+ Y L L K GN +R+ KL+
Sbjct: 267 VDRGVAVDLVNYNSLLATLAKA--GNM-DRVWKLM 298
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 139/288 (48%), Gaps = 3/288 (1%)
Query: 238 LMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
L+ +GN A+ +F + + C P + F LI + + + A+ K++ Q+
Sbjct: 36 LITAYGRGNKSGDAFDLFNQAESFACSP-TVHAFTKLIDILVNSGEFERAELVYKKLVQK 94
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G D +Y I ++ R + +EM+ KG +P TY +++ALGKA ++ EA
Sbjct: 95 GCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEA 154
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
++ M P+ Y+ L+ K G++ A +F +MK++G P+V+TYN ++ +
Sbjct: 155 RSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDA 214
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C+ A KL KM D C PD TY+ L+ + R++ + + M V++D
Sbjct: 215 LCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVD 274
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
Y SL+ L ++G ++ +EM KG P ++ + + L K
Sbjct: 275 LVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGK 322
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 134/270 (49%), Gaps = 10/270 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+T+V+ LGKS + ++ +EM ++ G V L ++++ L + G D + +
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREM--VDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKE 300
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIP-LSSQIFNILIHGWCKT 279
M + G D + + +MD L K N + A +VF + C P L S +NILI + +
Sbjct: 301 MSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLIS--YNILIDSYARF 358
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
A++ ++EM + GF P+ +Y I + + L+EM+ GC+P V+TY
Sbjct: 359 GDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTY 418
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+M LGK + A +++++MK PDT Y+ I L+ R+ +A +F+DMK
Sbjct: 419 NRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKA 478
Query: 400 QGVVPNVLTYNTMISSA--CARSEEENALK 427
G + Y +I +A +E E LK
Sbjct: 479 VGCPVDKAMYRILIRAAHRAGDTELEAQLK 508
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 103/214 (48%), Gaps = 1/214 (0%)
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
LKEM +G T ++ A G+ + +A ++ + +S C P ++ LI IL
Sbjct: 18 LKEMVAEGRPLRPNTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVN 77
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
+G + A +++ + ++G + YN +I + ++A+++ ++M+ +PD T
Sbjct: 78 SGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYT 137
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y L+ + R++ M + ++ + TY L+ + G+L++A F EM
Sbjct: 138 YGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMK 197
Query: 504 SKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
+G P TY +L + L R+G A++ +K+
Sbjct: 198 RRGFQPSVVTYNILLDALCSAGRVGAARKLFHKM 231
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 68/164 (41%), Gaps = 5/164 (3%)
Query: 377 LIFILSKAGRVKDANEIFEDMKKQG--VVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++ +L+ G + + ++M +G + PN L +I++ ++ +A L + E
Sbjct: 1 MLVVLASWGILDPLETLLKEMVAEGRPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAES 58
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C P + L+ + + + + + +D Y L+R SG+L+
Sbjct: 59 FACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDS 118
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLL 537
A F EM KG P TY L L K R+ A+ + +L
Sbjct: 119 AMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAML 162
>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
Length = 538
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 107/406 (26%), Positives = 200/406 (49%), Gaps = 22/406 (5%)
Query: 114 VVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGK 173
VV+ L CG ++N +E +R S TP T +YN ++ L +
Sbjct: 60 VVDGL--CGAGMANQALE-LVRELSGVYTP----------------TLFIYNGIITGLCR 100
Query: 174 SKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR 233
+ + ++++++M E + ++ T + ++ L R + A E F+ MK+ G + +
Sbjct: 101 ASRVMDAYKVLEKMVE-ESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPI 159
Query: 234 ALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
L+ L + ++ A +V +E + +P ++ G CK ++DDA K M+EM
Sbjct: 160 TYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEM 219
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ-EKGCKPSVITYTIVMHALGKAKQ 351
Q G P+ V+Y+ + + + + +V +E + KG Y + AL KA
Sbjct: 220 RQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGY 279
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++ A K E+++ +PD YS LI ++AG+ + E+ EDM++ GV P+V+TY+T
Sbjct: 280 LDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYST 339
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I+ C + ++A +LL+ ME P+ TY ++ C+ +M ++ + M K+
Sbjct: 340 LINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
S D TY+ ++ GL ++G L+ A FE + S P + Y M+
Sbjct: 400 CSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMV 445
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 98/402 (24%), Positives = 199/402 (49%), Gaps = 13/402 (3%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FT ++ G ++ Y +VD L + ELV+E+ + +L + I+
Sbjct: 41 LFTLLASR-GVVYGETTYKLVVDGLCGAGMANQALELVRELSGVYTP--TLFIYNGIITG 97
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPL 264
L R R DA + M + + + ++L++ L + N + A +VF E K C P
Sbjct: 98 LCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKP- 156
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ + LI + ++D+A + M E DV++ T + C+ ++DD L
Sbjct: 157 NPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKAS---RLDDAL 213
Query: 325 K---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP-DTSFYSSLIFI 380
K EM++ G +P+ +TY+ ++H + +++ ++ +E+ K+ + + Y +
Sbjct: 214 KFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDA 273
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L KAG + A + E++++ GVVP+V+TY+ +I++ + + +L+LL+ M + KPD
Sbjct: 274 LCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPD 333
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY+ L+ + C++++ + LL M + TY S++ GL +SGK++ +E
Sbjct: 334 VVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYE 393
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKE 542
M+ P TY ++ L K + ++ ++ +L+ ++E
Sbjct: 394 MMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE 435
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 151/323 (46%), Gaps = 5/323 (1%)
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS 265
+L R ++ + V F + GV +++D L A ++ E +
Sbjct: 28 KLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELSGVYTPT 87
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
I+N +I G C+ +V DA K +++M ++ P+V +YT + CR + + +
Sbjct: 88 LFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQ 147
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM+ GCKP+ ITY ++ L +A +I+EAL+V + +S + D ++++ L KA
Sbjct: 148 EMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKAS 207
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP---DCE 442
R+ DA + E+M++ GV PN +TY+ ++ E + ++ + EE K +
Sbjct: 208 RLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFE--EEKARKGGSLEAA 265
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y L C+ + + + ++ V D TY+ L+ +G+ + + E+M
Sbjct: 266 AYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDM 325
Query: 503 ISKGIVPYHSTYKMLEEKLEKKR 525
G+ P TY L L K+R
Sbjct: 326 RRNGVKPDVVTYSTLINVLCKER 348
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/307 (24%), Positives = 153/307 (49%), Gaps = 3/307 (0%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G P Y T++ L ++ + ++ E L + T +TI+ L + R
Sbjct: 151 RNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELP-TDVITCTTIVGGLCKASRL 209
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNI 271
DDA++ M++ GV + S L+ + ++ + F E K L + +
Sbjct: 210 DDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPG 269
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+ CK +D A+K+++E+ Q G PDVV+Y+ I + R F + L++M+ G
Sbjct: 270 YLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNG 329
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
KP V+TY+ +++ L K ++ +A ++ E M++ P+ Y+S++ L K+G++ + +
Sbjct: 330 VKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVH 389
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++E M K P+V+TY+ +++ ++A+KL + ++ PD Y+ ++
Sbjct: 390 RVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSL 449
Query: 452 CRKKRMK 458
CR +++
Sbjct: 450 CRAGKLE 456
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 127/261 (48%), Gaps = 3/261 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMK-KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T S ++ + G D + F K + G + A +D L K ++ A K E
Sbjct: 230 TYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEE 289
Query: 258 FKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ + + +++LI+ + + + D + + +++M + G PDVV+Y+ I C+E+
Sbjct: 290 LRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERK 349
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
F+ L+ M+ G P+V+TY VM L K+ +++E +VYE M C PD YS
Sbjct: 350 FQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSI 409
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
++ LSKAG + A ++FE +K P+ Y+ +I+S C + E A + ME +
Sbjct: 410 IMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTV 469
Query: 437 CKPD-CETYAPLLKMCCRKKR 456
+ C A L+ C +R
Sbjct: 470 AGDNICRALAGLVAALCDAER 490
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 109/228 (47%), Gaps = 1/228 (0%)
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
+ + + G D ++T R F +V + +G TY +V+ L A
Sbjct: 8 RSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGA 67
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
N+AL++ ++ S P Y+ +I L +A RV DA ++ E M ++ +VPNV TY
Sbjct: 68 GMANQALELVREL-SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTY 126
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
+++ C ++ + A ++ Q+M+ + CKP+ TY L++ R + ++
Sbjct: 127 TILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRS 186
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ D T ++V GL ++ +L+ A F EEM G+ P TY L
Sbjct: 187 LELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNL 234
>gi|449488099|ref|XP_004157939.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 195/445 (43%), Gaps = 39/445 (8%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMV------------------- 168
S+ + ++RFS+ L FF +++T HT Y+ ++
Sbjct: 77 SIAFEVIKRFSDPLL-GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCM 135
Query: 169 ---DVLGKSKKFCLMWELVKEMDELNNGY------------VSLATMSTIMRRLVRGGRY 213
+L S L+ M +L++ VS + ++ LV+
Sbjct: 136 RSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLV 195
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNI 271
D+AV FR + D + ++L+ L + ++ A++ F + C P +N
Sbjct: 196 DEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFP-DIVSYNT 254
Query: 272 LIHGWCKTRKVDDAQKAMKE-MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI+G+C+ ++ +KE M +G SPDV++YT I YC+ D + + EM
Sbjct: 255 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G KP+ T+ +++ GK + A+ +YEKM CLPD ++SLI + G V
Sbjct: 315 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 374
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+++E+MK + + PNV TY +I++ C + A L+ ++ P Y P++
Sbjct: 375 LKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDG 434
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ ++ NF++ M + D T+ L+ G G++ A S F +MI VP
Sbjct: 435 FCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPD 494
Query: 511 HSTYKMLEEKLEKKRLGNAKERINK 535
T L L K + N +I +
Sbjct: 495 EITINSLISCLLKAGMPNEASQIKQ 519
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 165/355 (46%), Gaps = 13/355 (3%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ T +MR L + G D A F M+ G+ D+ L +L+ + + ++ A K F
Sbjct: 108 TFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA-KNF 166
Query: 256 LEFKDC--IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
L C I +S ++N L++ K VD+A +E + F PDV S+ I CR
Sbjct: 167 LNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCR 226
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL----P 369
+ K + + M GC P +++Y +++ + +NE K ++ +K D + P
Sbjct: 227 IGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCR---VNEISKGHDLLKEDMLIKGVSP 283
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D Y+S+I K G +K A+E+F++M G+ PN T+N +I +A+ +
Sbjct: 284 DVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMY 343
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+KM C PD T+ L+ CR+ + L M ++S + TYA L+ L +
Sbjct: 344 EKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKE 403
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
++ A +F + S +VP Y + + K G E N ++A +E+K
Sbjct: 404 NRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKA--GKVDEA-NFIVAEMQEKK 455
>gi|3258568|gb|AAC24378.1| Unknown protein [Arabidopsis thaliana]
Length = 691
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 116/456 (25%), Positives = 208/456 (45%), Gaps = 50/456 (10%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFG--FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
++S + V QTLR PA G FF W + G+ H + + M++ LG+++ +
Sbjct: 65 TISRTTVLQTLRLIK---VPADGLRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLNVAR 120
Query: 182 ELVKEMDELNNGYVSLAT--MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+ ++ +NG V L ++++R G + ++V+ F+ MK+ G+ + L+
Sbjct: 121 NFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLL 180
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLS--SQIFNILIHGWCKTRKVDDAQKAMKEMFQQG- 296
L+K A+ +F E + ++ S FN LI+G+CK VD+A + K+M G
Sbjct: 181 SILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELAGK 240
Query: 297 -----------------FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
P+VVSYT + YC +++ + +M +G KP+ +TY
Sbjct: 241 VKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTY 300
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCL----PDTSFYSSLIFILSKAGRVKDANEIFE 395
++ L +A + +E + + +D PD ++ LI AG + A ++F+
Sbjct: 301 NTLIKGLSEAHRYDEIKDIL--IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQ 358
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE-------DLCKPDCETYAPLL 448
+M + P+ +Y+ +I + C R+E + A L ++ E D CKP Y P+
Sbjct: 359 EMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMF 418
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ C + K + + K V D +Y +L+ G GK + A M+ + V
Sbjct: 419 EYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFV 477
Query: 509 PYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
P TY++L + L K +G A LLAH Q+
Sbjct: 478 PDLETYELLIDGLLK--IGEA------LLAHDTLQR 505
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/426 (23%), Positives = 170/426 (39%), Gaps = 48/426 (11%)
Query: 108 YQSPDKVVEALKGCGVSVS----NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEM 163
+Q K+ + +K G+S S NSL+ L+R + A F + G
Sbjct: 154 FQESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGM--AHDLFDEMRRTYGVTPDSYT 211
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR-------------LVRG 210
+NT+++ K+ + + K+M+ ++ +S ++++ LVRG
Sbjct: 212 FNTLINGFCKNSMVDEAFRIFKDMELAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRG 271
Query: 211 ----GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS 266
D+AV F M G++ + +V +TL+KG S H Y E KD + +
Sbjct: 272 YCMKQEIDEAVLVFHDMLSRGLKPN----AVTYNTLIKGLSEAHRYD---EIKDILIGGN 324
Query: 267 Q----------IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
FNILI C +D A K +EM PD SY+ I C +
Sbjct: 325 DAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 384
Query: 317 FRKVDDTLKEMQEK-------GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
F + + E+ EK CKP Y + L + +A KV+ ++ +
Sbjct: 385 FDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRG-VQ 443
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D Y +LI + G+ K A E+ M ++ VP++ TY +I E A L
Sbjct: 444 DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTL 503
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
Q+M P T+ +L ++K L+T M + + + +VR L S
Sbjct: 504 QRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSS 563
Query: 490 GKLELA 495
+ E A
Sbjct: 564 AQKEKA 569
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/378 (21%), Positives = 168/378 (44%), Gaps = 33/378 (8%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA----TMSTIMRRLVRGGRYDDAVEA 219
YNT++ L ++ ++ E+ + N+ + + A T + +++ G D A++
Sbjct: 300 YNTLIKGLSEAHRY---DEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKV 356
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---------KDCIPLSSQIFN 270
F+ M + D+ + SVL+ TL N + A +F E +C PL++ +N
Sbjct: 357 FQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAA-YN 415
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+ C K A+K +++ ++G D SY I +CRE F+ + L M +
Sbjct: 416 PMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRR 474
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP-DTSFYSSLIFILSKAGRVKD 389
P + TY +++ L K + A ++M LP T+F+S +L++ + K
Sbjct: 475 EFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHS----VLAELAKRKF 530
Query: 390 ANEIF---EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED--LCKPDCETY 444
ANE F M ++ + N+ ++ + +++E A +++ + ++ L K +
Sbjct: 531 ANESFCLVTLMLEKRIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKME---- 586
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
LL C +++ + L+ + +D T +++ GL + + A S + E++
Sbjct: 587 -ELLGYLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVE 645
Query: 505 KGIVPYHSTYKMLEEKLE 522
G S + +L LE
Sbjct: 646 LGNHQQLSCHVVLRNALE 663
>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
Length = 782
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 103/342 (30%), Positives = 167/342 (48%), Gaps = 7/342 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGNSVEHAYKV 254
++ T S++M L + GR +A + F M K G+E D L+ KG VE +
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 364
Query: 255 FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
L ++ I +FNILI + K KVD A +M Q G +P+VV Y I+ C+
Sbjct: 365 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Query: 315 KDFRKVDDTL---KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
VDD + ++M ++G P++I YT ++H L + ++A ++ +M +T
Sbjct: 425 G---SVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNT 481
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
F++S+I K GRV ++ ++F+ M + GV P+++TYNT+I C + + A KLL
Sbjct: 482 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLAS 541
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M KPD TY L+ CR RM L M + VS + TY +++GL + +
Sbjct: 542 MVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRR 601
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
A + + G STY ++ L K L + R+
Sbjct: 602 TAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRM 643
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 177/410 (43%), Gaps = 78/410 (19%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF- 255
+ + +T++ + G D A + M G+ D S ++ L K +++ A +V
Sbjct: 201 VVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLN 260
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC--- 312
K+ + +N ++HG+C + + +A +K+M G P+VV+Y+ + + C
Sbjct: 261 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNG 320
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIV------------MHAL-------------- 346
R + RK+ D+ M ++G +P + TY + MHAL
Sbjct: 321 RSTEARKIFDS---MTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHH 377
Query: 347 ---------GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
K +++++A+ V+ KM+ P+ Y ++I +L K+G V DA FE M
Sbjct: 378 VFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQM 437
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKL-LQKMEEDLC------------------- 437
+G+ PN++ Y ++I C + + A +L L+ ++ +C
Sbjct: 438 IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 497
Query: 438 ---------------KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
KPD TY L+ CC +M LL M V D TY +L
Sbjct: 498 IESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTL 557
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
+ G +++ A + F+EM+S G+ P TY ++ + L +R AKE
Sbjct: 558 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 607
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 156/332 (46%), Gaps = 5/332 (1%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVE-AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
V T + +++ L R DA++ R M + G D + + L+ L N + A +
Sbjct: 125 VDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALE 184
Query: 254 VFLEFKD----CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+ D P +N +++G+ K D A EM +G PDVV+Y+ I
Sbjct: 185 LLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIA 244
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
C+ + K + L M + G P +TY ++H + Q EA+ +KM+SD P
Sbjct: 245 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEP 304
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ YSSL+ L K GR +A +IF+ M K+G+ P++ TY T++ + LL
Sbjct: 305 NVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 364
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
M + +PD + L+ +++++ + + M ++ ++ + Y +++ L +S
Sbjct: 365 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 424
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
G ++ A +FE+MI +G+ P Y L L
Sbjct: 425 GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 145/311 (46%), Gaps = 1/311 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFN 270
+ D A+ F M+++G+ + ++D L K SV+ A F + D + + ++
Sbjct: 391 KVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 450
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LIHG C K D A++ + EM +G + + + I+ +C+E + + M
Sbjct: 451 SLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRI 510
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G KP +ITY ++ A +++EA K+ M S PD Y +LI + R+ DA
Sbjct: 511 GVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDA 570
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+F++M GV PN++TYN ++ A +L + + + + TY +L
Sbjct: 571 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHG 630
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ + ++ D+ ++ T+ ++ L++ G+++ A F + G+VP
Sbjct: 631 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPD 690
Query: 511 HSTYKMLEEKL 521
TY ++ E L
Sbjct: 691 VRTYSLMAENL 701
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 137/313 (43%), Gaps = 45/313 (14%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR-KVDDTLKEM 327
+ ILI C+ ++D A+ + ++GF D +++T ++ C +K +D L+ M
Sbjct: 95 YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154
Query: 328 QEKGC--------------------------------------KPSVITYTIVMHALGKA 349
E GC P V++Y V++ K
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
++A Y +M LPD YSS+I L KA + A E+ M K GV+P+ +TY
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N+++ C+ + + A+ L+KM D +P+ TY+ L+ C+ R + M K
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML------EEKLEK 523
+ D TY +L++G G L + + M+ GI P H + +L +EK+++
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394
Query: 524 KRLGNAKERINKL 536
L +K R + L
Sbjct: 395 AMLVFSKMRQHGL 407
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 69/311 (22%), Positives = 143/311 (45%), Gaps = 4/311 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGM---KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
+ +++ L R +A+E M + G D + + +++ K + AY + E
Sbjct: 167 NNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHE 226
Query: 258 FKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
D L + ++ +I CK + +D A + + M + G PD ++Y + YC
Sbjct: 227 MLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQ 286
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
++ TLK+M+ G +P+V+TY+ +M+ L K + EA K+++ M PD + Y +
Sbjct: 287 PKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRT 346
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ + G + + + + + M + G+ P+ +N +I + + + + A+ + KM +
Sbjct: 347 LLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHG 406
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
P+ Y ++ + C+ + M ++ + Y SL+ GL K + A
Sbjct: 407 LNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAE 466
Query: 497 SFFEEMISKGI 507
EM+ +GI
Sbjct: 467 ELILEMLDRGI 477
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 139/311 (44%), Gaps = 9/311 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
T++ L + G DDA+ F M G+ + + L+ L + + A ++ LE D
Sbjct: 415 GTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLD 474
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
I L++ FN +I CK +V +++K M + G PD+++Y I+ C +
Sbjct: 475 RGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDE 534
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
L M G KP ++TY +++ + ++++AL ++++M S P+ Y+ ++
Sbjct: 535 ATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 594
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L R A E++ + K G + TYN ++ C + + AL++ Q +LC
Sbjct: 595 GLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQ----NLCLT 650
Query: 440 DCE----TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
D + T+ ++ + RM L N + D TY+ + LIE G LE
Sbjct: 651 DLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEEL 710
Query: 496 CSFFEEMISKG 506
F M G
Sbjct: 711 DDLFLSMEENG 721
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/343 (25%), Positives = 157/343 (45%), Gaps = 14/343 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y T++DVL KS ++M ++ G ++ ++++ L ++D A E
Sbjct: 414 YGTVIDVLCKSGSVDDAMLYFEQM--IDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILE 471
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRK 281
M G+ +T + ++D+ K V + K+F L + + +N LI G C K
Sbjct: 472 MLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 531
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSVIT 338
+D+A K + M G PD+V+Y I YCR ++DD L KEM G P++IT
Sbjct: 532 MDEATKLLASMVSVGVKPDIVTYGTLINGYCR---VSRMDDALALFKEMVSSGVSPNIIT 588
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y I++ L ++ A ++Y + + S Y+ ++ L K +A +F+++
Sbjct: 589 YNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLC 648
Query: 399 KQGVVPNVLTYNTMISS--ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
+ T+N MI + C R +E A L + PD TY+ + + +
Sbjct: 649 LTDLQLETRTFNIMIGALLKCGRMDE--AKDLFAAHSANGLVPDVRTYSLMAENLIEQGS 706
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
++ L+ L M +N S D+ S+VR L++ G + A ++
Sbjct: 707 LEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYL 749
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 138/287 (48%), Gaps = 10/287 (3%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM--STIMRRLVRGGRYDD 215
TP + Y +++ L K+ EL+ EM L+ G + L T+ ++I+ + GR +
Sbjct: 443 TPNIIVYTSLIHGLCTCDKWDKAEELILEM--LDRG-ICLNTIFFNSIIDSHCKEGRVIE 499
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILI 273
+ + F M + GV+ D + L+D ++ A K+ + + I + LI
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS-VGVKPDIVTYGTLI 558
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+G+C+ ++DDA KEM G SP++++Y ++ + + + + G +
Sbjct: 559 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQ 618
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+ TY I++H L K +EAL++++ + D +T ++ +I L K GR+ +A ++
Sbjct: 619 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDL 678
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
F G+VP+V TY+ M + + E L MEE+ C D
Sbjct: 679 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSAD 725
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 107/231 (46%), Gaps = 4/231 (1%)
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+P V +Y I CR L + +KG + IT+T ++ L K+ ++A+
Sbjct: 89 TPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMD 148
Query: 358 -VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE---DMKKQGVVPNVLTYNTMI 413
V +M C+PD Y++L+ L R ++A E+ D + G P+V++YNT++
Sbjct: 149 IVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVL 208
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ + + A +M + PD TY+ ++ C+ + M +L M KN V
Sbjct: 209 NGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVM 268
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
D TY S++ G SG+ + A ++M S G+ P TY L L K
Sbjct: 269 PDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKN 319
>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
Length = 876
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 179/371 (48%), Gaps = 21/371 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN+++ L K KK L+ +M + +G + ++ T +T+++ +D+A F
Sbjct: 385 YNSLMYGLVKDKKLHKAMALLTKMQK--DGIIPNVITYTTLLQGQCDEHDFDNAFRLFEM 442
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
M++ G++ D A +VL D L K E AY + + + L+ + LI G+ K
Sbjct: 443 MEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV--RKGVALTKVYYTTLIDGFSKAGNT 500
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D A ++ M +G +PD +Y+ + C++K + L +M +G K ++ YTI+
Sbjct: 501 DFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTIL 560
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ + + + + A ++Y +M S P + Y+ I K GR++DA ++ M+++GV
Sbjct: 561 IDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGV 620
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+V+TYN +I + A L++M C+P+ TY LLK + V +
Sbjct: 621 APDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSV 680
Query: 463 ----------------LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
LL M K+ ++ TY+SL+ G ++G+LE AC + M KG
Sbjct: 681 DTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKG 740
Query: 507 IVPYHSTYKML 517
+ P Y +L
Sbjct: 741 LSPNEDIYTLL 751
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/366 (28%), Positives = 176/366 (48%), Gaps = 45/366 (12%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKD 260
++ L + GR DA F M + GV + ++ K + A K+ +E
Sbjct: 179 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 238
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR-- 318
C P +N LI+G C +K ++A++ + ++GF+P VV++T I YC + F
Sbjct: 239 CHP-DDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDA 296
Query: 319 ------------KVD--------------DTLKEMQE-------KGCKPSVITYTIVMHA 345
K+D D LKE +E G P+VITYT ++
Sbjct: 297 LRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDG 356
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K+ +++ AL+V + M+ D C P+ Y+SL++ L K ++ A + M+K G++PN
Sbjct: 357 YCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPN 416
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-KVLNFLL 464
V+TY T++ C + +NA +L + ME++ KPD YA L C+ R + +F++
Sbjct: 417 VITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFIV 476
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EK 523
+ V++ Y +L+ G ++G + A + E MI +G P TY +L L ++
Sbjct: 477 ----RKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQ 532
Query: 524 KRLGNA 529
KRL A
Sbjct: 533 KRLNEA 538
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 187/381 (49%), Gaps = 21/381 (5%)
Query: 161 PEMYNTMVDVLG-----KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
PE + VLG + +K C ++ ++ M N Y + + +++ L
Sbjct: 101 PETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEY----SYTILIQGLCDAKCVRK 156
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-----FN 270
A+ F MK+ G + RA + L+ L K V A +F D +P + + +N
Sbjct: 157 ALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLF----DAMPQNGVVPSVMTYN 212
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+I G+ K +++DA K + M + G PD +Y I C +K + ++ L ++
Sbjct: 213 AMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKT-EEAEELLNNAVKE 271
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P+V+T+T +++ A++ ++AL++ KM S C D + LI L K R+K+A
Sbjct: 272 GFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 331
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+ ++ G+VPNV+TY ++I C + + AL++L+ ME D C+P+ TY L+
Sbjct: 332 KELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYG 391
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
+ K++ LLT M K+ + + TY +L++G + + A FE M G+ P
Sbjct: 392 LVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPD 451
Query: 511 HSTYKMLEEKLEKKRLGNAKE 531
Y +L + L K G A+E
Sbjct: 452 EHAYAVLTDALCKA--GRAEE 470
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 162/328 (49%), Gaps = 3/328 (0%)
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILI 273
DA++A R + + + + +L + + E+ +V+ + +D + + +N +I
Sbjct: 16 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 75
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+CK + A + + + + G P+ + + YCR + RK M GC+
Sbjct: 76 KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 135
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+ +YTI++ L AK + +AL ++ MK D C P+ ++ LI L K+GRV DA +
Sbjct: 136 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 195
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
F+ M + GVVP+V+TYN MI +ALK+ + ME++ C PD TY L+ C
Sbjct: 196 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD 255
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI-SKGIVPYHS 512
+K + LL + K + T+ +L+ G + K + A +M+ SK +
Sbjct: 256 QKTEEA-EELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQV 314
Query: 513 TYKMLEEKLEKKRLGNAKERINKLLAHA 540
K++ ++K RL AKE +N++ A+
Sbjct: 315 FGKLINSLIKKDRLKEAKELLNEISANG 342
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 167/371 (45%), Gaps = 7/371 (1%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
+++ +++ L K + EL+ E+ NG V ++ T ++I+ + G+ D A+E
Sbjct: 313 QVFGKLINSLIKKDRLKEAKELLNEISA--NGLVPNVITYTSIIDGYCKSGKVDIALEVL 370
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKT 279
+ M++ G + + + LM LVK + A + + KD I + + L+ G C
Sbjct: 371 KMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDE 430
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
D+A + + M Q G PD +Y + C+ + ++ + KG + + Y
Sbjct: 431 HDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYY 487
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ KA + A + E+M + C PD+ YS L+ L K R+ +A I + M
Sbjct: 488 TTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSL 547
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+ + Y +I + ++A ++ +M KP TY + C++ R++
Sbjct: 548 RGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLED 607
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L+ M + V+ D TY L+ G G ++ A S + M+ P + TY +L +
Sbjct: 608 AEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLK 667
Query: 520 KLEKKRLGNAK 530
L K L +
Sbjct: 668 HLLKGNLAYVR 678
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/386 (22%), Positives = 171/386 (44%), Gaps = 20/386 (5%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYD 214
G T Y T++D K+ L++ M ++ G + T S ++ L + R +
Sbjct: 479 GVALTKVYYTTLIDGFSKAGNTDFAATLIERM--IDEGCTPDSYTYSVLLHALCKQKRLN 536
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI-PLSSQIFNILI 273
+A+ M G++ A ++L+D +++ +HA +++ E S+ + + I
Sbjct: 537 EALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFI 596
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+ +CK +++DA+ + +M ++G +PDVV+Y I+ + TLK M C+
Sbjct: 597 NSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCE 656
Query: 334 PSVITYTIVMHALGKAK----------------QINEALKVYEKMKSDDCLPDTSFYSSL 377
P+ TY +++ L K +++ ++ E+M P + YSSL
Sbjct: 657 PNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSL 716
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I KAGR+++A + + M +G+ PN Y +I C E AL + M E
Sbjct: 717 IAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGF 776
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
+P E+Y L+ C + + + L + + + D + L GL+++G +++
Sbjct: 777 QPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYVDICFQ 836
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
M + TY ++ K+ +
Sbjct: 837 MLSIMEKRYCCISSQTYALVTNKMHE 862
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 164/338 (48%), Gaps = 10/338 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ S ++ + R Y + ++ M +G+ +T L++L+++ N + A+ V
Sbjct: 9 SIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVL 68
Query: 256 LEFKDCIPL----SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
D + L S+ F LI G C K+ +A + +M +GF PDV++Y I
Sbjct: 69 ---GDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGL 125
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C+++ + +M KG P+ TY+ ++H L EA++++ M +PD
Sbjct: 126 CKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQ 185
Query: 372 SFYSSLIFILSKAGRVK---DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
+++L+ L K G ++ A +FE+M +QG++P+ +TYNT+I C +A+ L
Sbjct: 186 LTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIAL 245
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+M PD TY L C+ R+ LL + ++ D Y+ ++ G+
Sbjct: 246 FHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCR 305
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
+G+LE A F ++ SKG+ P TY ++ L ++ L
Sbjct: 306 AGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGL 343
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 118/244 (48%), Gaps = 4/244 (1%)
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
K+M G + + I +C L ++ + G +PS T+T ++ L
Sbjct: 34 KQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVE 93
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+I EAL++++KM + PD Y +LI L K ++ +A +F DM +G+ PN TY
Sbjct: 94 GKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTY 153
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN---FLLTH 466
+++I C + A++L M PD T+ L+ C++ +++++ L
Sbjct: 154 SSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEE 213
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-R 525
M + + D TY +L+ GL G+L A + F EM+ G +P TY++L + L K R
Sbjct: 214 MSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHR 273
Query: 526 LGNA 529
L A
Sbjct: 274 LAEA 277
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%)
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
PS++ ++ ++ ++ + K + L +Y++M S +T + LI R+ A +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
D+ K G P+ T+ T+I C + AL+L KM + +PD TY L+ C+
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+++ L + M +S + TY+SL+ GL G + A F MI + I+P T
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187
Query: 514 YKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
+ L + L K+ + ++ L +Q
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQ 217
>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
Length = 586
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 175/384 (45%), Gaps = 3/384 (0%)
Query: 145 FGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
GF AK + G T + T+++ L K+ +F EL +M + T +TI
Sbjct: 144 LGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVA-RGCQPDVYTYTTI 202
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCI 262
+ L + G A + M + G + D S L+D+L K V A +F K I
Sbjct: 203 INGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGI 262
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+ + LI G C + +A + EM PD+V+++ I+ +C+E + +
Sbjct: 263 SPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQG 322
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
LK M E G +P+VITY +MH ++ EA K+++ M + C PD YS LI
Sbjct: 323 VLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYC 382
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
R+ +A ++F +M QG+ PN ++Y T+I + C + A +L + M + PD
Sbjct: 383 MVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLC 442
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY+ LL+ C++ + L M + + Y L+ + +SG L A F E+
Sbjct: 443 TYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSEL 502
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRL 526
G+ P Y + L K+ L
Sbjct: 503 FVHGLQPDVQIYTTIINGLCKEGL 526
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 160/339 (47%), Gaps = 5/339 (1%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
A F++ K + G T Y +++ L ++ ++ EM LN + T S +
Sbjct: 250 ALDIFSYMKAK-GISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNI-MPDIVTFSLL 307
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDC 261
+ + G +A + M + GVE + + LM V A K+F + + C
Sbjct: 308 IDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGC 367
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
P ++ILI+G+C +++D+A++ EM QG +P+ VSYT I +C+ R+
Sbjct: 368 KP-DVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAR 426
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ K+M G P + TY++++ K + +A +++ M+ P+ Y+ LI +
Sbjct: 427 ELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSM 486
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K+G + A ++F ++ G+ P+V Y T+I+ C + AL+ +KMEED C P+
Sbjct: 487 CKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNE 546
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+Y +++ + K L+ M D GT A
Sbjct: 547 FSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGTTA 585
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 138/278 (49%), Gaps = 1/278 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
NILI+ +C + VD + ++ + G P ++++T I C+ +F + + +M
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+GC+P V TYT +++ L K + A + +KM C PD YS+LI L K V
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVN 248
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A +IF MK +G+ P V++Y ++I C+ S + A +L +M PD T++ L+
Sbjct: 249 EALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLI 308
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ C++ + +L M + V + TY SL+ G ++ A F+ MI++G
Sbjct: 309 DIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCK 368
Query: 509 PYHSTYKML-EEKLEKKRLGNAKERINKLLAHAKEQKT 545
P +Y +L KR+ AK+ N+++ T
Sbjct: 369 PDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNT 406
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 122/257 (47%), Gaps = 2/257 (0%)
Query: 263 PLSSQI-FNILIHGWCKTRKVDDAQKAM-KEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
PL I FN L+ + R+ DA ++ K+M G SP+ + I +C +
Sbjct: 86 PLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLG 145
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
L ++ + G +P++IT+T +++ L KA + +AL++++ M + C PD Y+++I
Sbjct: 146 FSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIING 205
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K G A + + M + G P+V+TY+T+I S C AL + M+ P
Sbjct: 206 LCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPT 265
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
+Y L++ C R K + +L M ++ D T++ L+ + G + A +
Sbjct: 266 VVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLK 325
Query: 501 EMISKGIVPYHSTYKML 517
M G+ P TY L
Sbjct: 326 TMTEMGVEPNVITYNSL 342
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 92/209 (44%), Gaps = 4/209 (1%)
Query: 317 FRKVDDTL---KEMQEKGCKPSVITYTIVMHALGKAKQINEA-LKVYEKMKSDDCLPDTS 372
FR +DD L M + P +I + ++ A+ + +Q +A + + ++M+ P+T
Sbjct: 68 FRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTC 127
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
+ LI V + + K G+ P ++T+ T+I+ C E AL+L M
Sbjct: 128 TLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDM 187
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
C+PD TY ++ C+ L+ M + D TY++L+ L + +
Sbjct: 188 VARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLV 247
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKL 521
A F M +KGI P +Y L + L
Sbjct: 248 NEALDIFSYMKAKGISPTVVSYTSLIQGL 276
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 75/180 (41%), Gaps = 1/180 (0%)
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN-EIFEDMKKQGVVPNVLT 408
+ I++AL + M LP ++ L+ + + + DA + + M+ G+ PN T
Sbjct: 69 RNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCT 128
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
N +I+ C + +L K+ + +P T+ L+ C+ L M
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGN 528
D TY +++ GL + G+ A ++M G P TY L + L K RL N
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVN 248
>gi|449446624|ref|XP_004141071.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Cucumis sativus]
Length = 548
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 195/445 (43%), Gaps = 39/445 (8%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMV------------------- 168
S+ + ++RFS+ L FF +++T HT Y+ ++
Sbjct: 77 SIAFEVIKRFSDPLL-GLKFFEFSRTHLSINHTFNTYDLLMRNLCKVGLNDSAKIVFDCM 135
Query: 169 ---DVLGKSKKFCLMWELVKEMDELNNGY------------VSLATMSTIMRRLVRGGRY 213
+L S L+ M +L++ VS + ++ LV+
Sbjct: 136 RSDGILPDSSILELLVSSYARMGKLDSAKNFLNEVHCYGIKVSPFVYNNLLNMLVKQNLV 195
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNI 271
D+AV FR + D + ++L+ L + ++ A++ F + C P +N
Sbjct: 196 DEAVLLFREHLEPYFVPDVYSFNILIRGLCRIGEIDKAFEFFQNMGNFGCFP-DIVSYNT 254
Query: 272 LIHGWCKTRKVDDAQKAMKE-MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI+G+C+ ++ +KE M +G SPDV++YT I YC+ D + + EM
Sbjct: 255 LINGFCRVNEISKGHDLLKEDMLIKGVSPDVITYTSIISGYCKLGDMKAASELFDEMVSS 314
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G KP+ T+ +++ GK + A+ +YEKM CLPD ++SLI + G V
Sbjct: 315 GIKPNDFTFNVLIDGFGKVGNMRSAMVMYEKMLLLGCLPDVVTFTSLIDGYCREGEVNQG 374
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+++E+MK + + PNV TY +I++ C + A L+ ++ P Y P++
Sbjct: 375 LKLWEEMKVRNLSPNVYTYAVLINALCKENRIREARNFLRHLKSSEVVPKPFIYNPVIDG 434
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ ++ NF++ M + D T+ L+ G G++ A S F +MI VP
Sbjct: 435 FCKAGKVDEANFIVAEMQEKKCRPDKITFTILIIGNCMKGRMVEAISTFYKMIEINCVPD 494
Query: 511 HSTYKMLEEKLEKKRLGNAKERINK 535
T L L K + N +I +
Sbjct: 495 EITINSLISCLLKAGMPNEASQIKQ 519
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/355 (26%), Positives = 165/355 (46%), Gaps = 13/355 (3%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ T +MR L + G D A F M+ G+ D+ L +L+ + + ++ A K F
Sbjct: 108 TFNTYDLLMRNLCKVGLNDSAKIVFDCMRSDGILPDSSILELLVSSYARMGKLDSA-KNF 166
Query: 256 LEFKDC--IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
L C I +S ++N L++ K VD+A +E + F PDV S+ I CR
Sbjct: 167 LNEVHCYGIKVSPFVYNNLLNMLVKQNLVDEAVLLFREHLEPYFVPDVYSFNILIRGLCR 226
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL----P 369
+ K + + M GC P +++Y +++ + +NE K ++ +K D + P
Sbjct: 227 IGEIDKAFEFFQNMGNFGCFPDIVSYNTLINGFCR---VNEISKGHDLLKEDMLIKGVSP 283
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D Y+S+I K G +K A+E+F++M G+ PN T+N +I +A+ +
Sbjct: 284 DVITYTSIISGYCKLGDMKAASELFDEMVSSGIKPNDFTFNVLIDGFGKVGNMRSAMVMY 343
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+KM C PD T+ L+ CR+ + L M ++S + TYA L+ L +
Sbjct: 344 EKMLLLGCLPDVVTFTSLIDGYCREGEVNQGLKLWEEMKVRNLSPNVYTYAVLINALCKE 403
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
++ A +F + S +VP Y + + K G E N ++A +E+K
Sbjct: 404 NRIREARNFLRHLKSSEVVPKPFIYNPVIDGFCKA--GKVDEA-NFIVAEMQEKK 455
>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
Length = 457
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 176/381 (46%), Gaps = 46/381 (12%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++ + GR D M G++ + + + L++ L K +E ++
Sbjct: 12 TFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCK---LERWHEAEELV 68
Query: 259 KDCIPLSSQ------IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT------- 305
+D I + ++ L+ G+CK KV+++++ +KE+ +G PD + YT
Sbjct: 69 RDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLC 128
Query: 306 ----------------------------CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
I CREK+ D L+ M G K V+
Sbjct: 129 KSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVV 188
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY +M L KA ++ EA ++ E+MK+ C PD YSS ++ L K+G+V +A+++ E M
Sbjct: 189 TYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQM 248
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKM-EEDLCKPDCETYAPLLKMCCRKKR 456
+ PNV+TYNT++ C + + AL+++++M D C + Y+ ++ C+ R
Sbjct: 249 RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGR 308
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ ++ M + D TY+SLV GL ++GK+E A EM +G P TY
Sbjct: 309 TQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCS 368
Query: 517 LEEKL-EKKRLGNAKERINKL 536
L L RL A+ + ++
Sbjct: 369 LVHGLCSCGRLAEAERMVEEM 389
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 189/378 (50%), Gaps = 12/378 (3%)
Query: 156 GYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST-IMRRLVRGGR 212
G TP++ Y+T++ K+ K EL+KE+ ++ G A M T +M L + R
Sbjct: 75 GGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEV--ISRGLRPDALMYTKVMASLCKSAR 132
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNI 271
+A+E M + G + L+ + ++E A + + +N
Sbjct: 133 LGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNT 192
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+ G CK ++ +A++ ++ M G +PDVV+Y+ F+ C+ L++M++
Sbjct: 193 LMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSD 252
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKM-KSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P+V+TY ++ L K+ +I+ AL++ E+M SD C + YS+++ L K GR ++A
Sbjct: 253 HDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEA 312
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ E M + G P+V+TY+++++ C + E A++ +++M + CKP+ TY L+
Sbjct: 313 RSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHG 372
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMD-----AGTYASLVRGLIESGKLELACSFFEEMISK 505
C R+ ++ M D TY +L+ GL ++G+++ A FF+ M S+
Sbjct: 373 LCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQ 432
Query: 506 GIVPYHSTYKMLEEKLEK 523
G P +Y + E L +
Sbjct: 433 GCDPDGVSYSTIVEGLAR 450
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 178/365 (48%), Gaps = 14/365 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS---LATMSTIMRRLVRGGRYDDAVEAF 220
YN +++ L K +++ ELV++M ++ G S L T ST++ + G+ +++ E
Sbjct: 48 YNGLLEGLCKLERWHEAEELVRDM--ISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELL 105
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCK 278
+ + G+ D + +M +L K + A ++ E C P + FN LI G C+
Sbjct: 106 KEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCP-TLITFNTLISGCCR 164
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ ++ A ++ M G DVV+Y ++ C+ ++ + L+ M+ GC P V+
Sbjct: 165 EKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVA 224
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y+ ++ L K+ ++ A +V E+M+ D P+ Y++++ L K+G++ A E+ E M
Sbjct: 225 YSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMA 284
Query: 399 KQ-GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
G NV+ Y+T++ C + A +++ M C+PD TY+ L+ C+ ++
Sbjct: 285 SSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKI 344
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV-----PYHS 512
+ + M +A TY SLV GL G+L A EEM S G P S
Sbjct: 345 EEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVS 404
Query: 513 TYKML 517
TY L
Sbjct: 405 TYNAL 409
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 151/310 (48%), Gaps = 8/310 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G T +NT++ + K + L++ M + + T +T+M L + GR
Sbjct: 145 RAGCCPTLITFNTLISGCCREKNLEMADSLLQTM-AASGVKADVVTYNTLMDGLCKAGRL 203
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNIL 272
+A + MK G D A S + L K V +A++V + +D + + +N +
Sbjct: 204 QEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTI 263
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQ-GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+ G CK+ K+D A + M++M G +VV Y+ ++ C+ ++ ++ M G
Sbjct: 264 LDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAG 323
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C+P V+TY+ +++ L KA +I EA++ +M + C P+ Y SL+ L GR+ +A
Sbjct: 324 CRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAE 383
Query: 392 EIFEDMKKQGVV-----PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ E+M G P+V TYN +I C ++ALK Q+M C PD +Y+
Sbjct: 384 RMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYST 443
Query: 447 LLKMCCRKKR 456
+++ R R
Sbjct: 444 IVEGLARSGR 453
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 145/307 (47%), Gaps = 15/307 (4%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T +T++ R + A + M GV+ D + LMD L K ++ A ++
Sbjct: 151 TLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLL 210
Query: 256 LEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
K C P ++ ++G CK+ KV +A + +++M P+VV+Y ++ C+
Sbjct: 211 ERMKASGCAP-DVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCK 269
Query: 314 EKDFRKVDDTLKEMQE----KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
K+D L+ M++ GC +V+ Y+ V+ L K + EA V E M C P
Sbjct: 270 SG---KIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRP 326
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D YSSL+ L KAG++++A E +M +G PN +TY +++ C+ A +++
Sbjct: 327 DVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMV 386
Query: 430 QKMEE-----DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
++M D C P TY L+ C+ R+ M D +Y+++V
Sbjct: 387 EEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVE 446
Query: 485 GLIESGK 491
GL SG+
Sbjct: 447 GLARSGR 453
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 138/263 (52%), Gaps = 2/263 (0%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P +S FN L++G+ K + D ++ ++ M +G P+VVSY +E C+ + + + ++
Sbjct: 7 PPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEE 66
Query: 323 TLKEMQEKGCK--PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+++M +G + P ++TY+ ++ KA ++ E+ ++ +++ S PD Y+ ++
Sbjct: 67 LVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMAS 126
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K+ R+ +A E+ E+M + G P ++T+NT+IS C E A LLQ M K D
Sbjct: 127 LCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKAD 186
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ C+ R++ LL M + + D Y+S V GL +SGK+ A E
Sbjct: 187 VVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLE 246
Query: 501 EMISKGIVPYHSTYKMLEEKLEK 523
+M P TY + + L K
Sbjct: 247 QMRDSDHDPNVVTYNTILDGLCK 269
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 120/225 (53%), Gaps = 2/225 (0%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M + G P+ V++ + + ++ + L+ M +G +P+V++Y ++ L K ++
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 352 INEALKVYEKM--KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+EA ++ M + PD YS+L+ KAG+V+++ E+ +++ +G+ P+ L Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
+++S C + AL+LL++M C P T+ L+ CCR+K +++ + LL M
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ V D TY +L+ GL ++G+L+ A E M + G P Y
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAY 225
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 121/235 (51%), Gaps = 10/235 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y++ V L KS K +++++M + ++ ++ T +TI+ L + G+ D A+E M
Sbjct: 225 YSSFVYGLCKSGKVLNAHQVLEQMRDSDHD-PNVVTYNTILDGLCKSGKIDTALEMMEQM 283
Query: 224 KKY-GVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
G + S ++D L K + A V + C P ++ L++G CK
Sbjct: 284 ASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRP-DVVTYSSLVNGLCKAG 342
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-----CKPS 335
K+++A +A++EM +G P+ V+Y + C + + ++EM G C PS
Sbjct: 343 KIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPS 402
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
V TY ++ L KA +I++ALK +++M+S C PD YS+++ L+++GR A
Sbjct: 403 VSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 2/158 (1%)
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M C P++ +++L+ SK GR D + E M +G+ PNV++YN ++ C
Sbjct: 1 MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60
Query: 422 EENALKLLQKM--EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
A +L++ M PD TY+ LL C+ +++ LL + + DA Y
Sbjct: 61 WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ L +S +L A EEMI G P T+ L
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTL 158
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 194/432 (44%), Gaps = 6/432 (1%)
Query: 69 LAGWVESHRLNEKSRISSRVLSENHETDVDKISKIL-----SKQYQSPDKVVEALKGCGV 123
L G + R E + SR+++ NH+ D ++ S S +V + G+
Sbjct: 271 LDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGL 330
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWEL 183
+ S+ ++ F + W T + YN M L S EL
Sbjct: 331 VLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATEL 390
Query: 184 VKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
+K+++ + T T++ L G + A E + G E D + S +++
Sbjct: 391 LKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFC 450
Query: 244 KGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K A +V+ KD +S ++N LI+G+C+ K++DA K EM G P ++
Sbjct: 451 KDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTII 510
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+Y I+ C+ + +++ KEM E+G KP + TY ++ L + K+++ AL++++++
Sbjct: 511 TYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEI 570
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
D ++ LI L AG+V +A I+ +MK++ PN++TYNT++
Sbjct: 571 LDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSI 630
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+ A L + ++ KPD TY +K C R LL + + T++ L
Sbjct: 631 DKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSIL 690
Query: 483 VRGLIESGKLEL 494
VR +I+ G +++
Sbjct: 691 VRAVIKYGPIQI 702
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/359 (26%), Positives = 164/359 (45%), Gaps = 10/359 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y M+D L K +F E+ M NN T ++ L R G D A + M
Sbjct: 267 YKVMLDGLCKLGRFKEAGEVWSRM-MANNHQADTVTYGILIHGLCRSGDVDSAARVYSDM 325
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS--QI--FNILIHGWCKT 279
K G+ D + L+ + A+K F D S QI +NI+ G +
Sbjct: 326 VKAGLVLDVSVYNSLIKGFCEVGRTGEAWK----FWDSTGFSGIRQITTYNIMTKGLLDS 381
Query: 280 RKVDDAQKAMKEMFQQG-FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
V +A + +K++ SPD V++ I C + + L++ + G + V +
Sbjct: 382 GMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFS 441
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y+ +++ K + ++A +VY+ M D C P++ Y++LI + ++ DA +I+ +M
Sbjct: 442 YSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMT 501
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
G P ++TYNT+I C + + A L ++M E KPD TYA L++ CR K++
Sbjct: 502 SNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVD 561
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
V + + + +D + L+ GL +GK++ A + EM K P TY L
Sbjct: 562 VALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTL 620
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 164/341 (48%), Gaps = 12/341 (3%)
Query: 172 GKSKKFCLMWE-LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
G +K +WE LV++ N LAT ++ L + GR+ +A E + M +
Sbjct: 242 GMFEKAMKVWEQLVRDPGASPN----LATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQA 297
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
DT +L+ L + V+ A +V+ + K + L ++N LI G+C+ + +A K
Sbjct: 298 DTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFW 357
Query: 290 KEMFQQGFSP--DVVSYTCFIEHYCREKDFRKVDDTLKEMQ-EKGCKPSVITYTIVMHAL 346
GFS + +Y + + + LK+++ + C P +T+ ++H L
Sbjct: 358 D---STGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGL 414
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
+ N A ++ E ++ D YSS+I K GR DANE++++M K G PN
Sbjct: 415 CENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNS 474
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
YN +I+ C S+ +A+K+ +M + C P TY L+ C+ ++ + + L
Sbjct: 475 HVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKE 534
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
M + D TYASL+RGL K+++A ++E++ G+
Sbjct: 535 MLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGL 575
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 151/360 (41%), Gaps = 45/360 (12%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYG-----VEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+T++ VR RY DA +AF +G + + + ++++ +L V+ A +F
Sbjct: 123 NTLLDAFVRARRYSDA-DAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLF 181
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
L + P ++ L+ G K ++D+A + EM G D V Y + R
Sbjct: 182 SSLRRRGVAP-DRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFR 240
Query: 314 EKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
F K +++ ++ G P++ TY +++ L K + EA +V+ +M +++ DT
Sbjct: 241 TGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTV 300
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC--ARSEE-------- 422
Y LI L ++G V A ++ DM K G+V +V YN++I C R+ E
Sbjct: 301 TYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDST 360
Query: 423 ------------------------ENALKLLQKMEEDL-CKPDCETYAPLLKMCCRKKRM 457
A +LL+++E D C PD T+ L+ C
Sbjct: 361 GFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGYA 420
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+L + +D +Y+S++ + G+ A ++ M+ G P Y L
Sbjct: 421 NRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNAL 480
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/272 (22%), Positives = 119/272 (43%), Gaps = 5/272 (1%)
Query: 270 NILIHGWCKTRKVDDAQKAMKEM----FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
N L+ + + R+ DA + F + +P++ +Y + C D +
Sbjct: 123 NTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFS 182
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
++ +G P +TY+ +M L K Q++ AL + ++M + D Y++L+ + G
Sbjct: 183 SLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTG 242
Query: 386 RVKDANEIFEDM-KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
+ A +++E + + G PN+ TY M+ C + A ++ +M + + D TY
Sbjct: 243 MFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTY 302
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ CR + + + M K + +D Y SL++G E G+ A F++
Sbjct: 303 GILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGF 362
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
GI + M + L+ + A E + +L
Sbjct: 363 SGIRQITTYNIMTKGLLDSGMVSEATELLKQL 394
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 41/240 (17%)
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMK----SDDCLPDTSFYSSLIFILSKAGR 386
GC P V ++ ++ A +A++ ++A + + P+ Y+ ++ L G
Sbjct: 114 GCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGD 173
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME------------- 433
V A +F ++++GV P+ +TY+T++S + +NAL LL +M
Sbjct: 174 VDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNA 233
Query: 434 ------------------EDLCK-----PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
E L + P+ TY +L C+ R K + + M N
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNA 529
+ D TY L+ GL SG ++ A + +M+ G+V S Y L + E R G A
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353
>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
Length = 655
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 185/384 (48%), Gaps = 5/384 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++ L ++ F + E++ +M E + + +TI+ + + G A E M
Sbjct: 265 FNTLISYLCRNGLFERVHEVLAQMAE-HGCTPDIRMYATIIDGICKEGHLKVAHEILNRM 323
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
YG++ + + L+ L E ++ E KDC PL FNIL+ +C+
Sbjct: 324 PSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDC-PLDDVTFNILVDFFCQNGL 382
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD + +++M G PDV++YT I +C+E + LK M GCKP+ I+YTI
Sbjct: 383 VDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTI 442
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ L A++ +A + +M C + +++LI L K G V+ A E+ + M G
Sbjct: 443 VLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNG 502
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P++++Y+T+I + + AL+LL M P+ Y+ + R+ R+ +
Sbjct: 503 CSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVI 562
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ ++ + DA Y +++ L + G+ E A F M+S G VP STY +L L
Sbjct: 563 QMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGL 622
Query: 522 EKKR-LGNAKERINKLLAHAKEQK 544
+ + A+E + +L + +K
Sbjct: 623 ASEGFVKEAQEMLTELCSKGALRK 646
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 169/380 (44%), Gaps = 8/380 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN MV ++ + L + N Y T ++R L GR DA+ M
Sbjct: 93 YNAMVAGYCRAGQLESARRLAAAVPVPPNAY----TYFPVVRALCARGRIADALAVLDEM 148
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ G V+++ +G A +V L + C L N++++ C
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGC-ALDVGNCNLVLNAICDQGS 207
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD A ++++ G PDVVSY ++ C K + V + ++EM C P+++T+
Sbjct: 208 VDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNT 267
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L + +V +M C PD Y+++I + K G +K A+EI M G
Sbjct: 268 LISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYG 327
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PNV+ YNT++ C+ E +LL +M + C D T+ L+ C+ + +
Sbjct: 328 LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVI 387
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL M + D TY +++ G + G ++ A + M + G P +Y ++ + L
Sbjct: 388 ELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGL 447
Query: 522 -EKKRLGNAKERINKLLAHA 540
+R +A++ +++++
Sbjct: 448 CSAERWVDAEDLMSQMIQQG 467
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/383 (22%), Positives = 161/383 (42%), Gaps = 39/383 (10%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD- 260
I+ RGG + AV + G D +++++ + SV+ A + +
Sbjct: 162 VILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSF 221
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
C P +N ++ G C ++ Q+ M+EM + P++V++ I + CR F +
Sbjct: 222 GCEP-DVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFER 280
Query: 320 VDDTLKEMQEKGC-----------------------------------KPSVITYTIVMH 344
V + L +M E GC KP+V+ Y ++
Sbjct: 281 VHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLK 340
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
L A++ E ++ +M DC D ++ L+ + G V E+ E M G +P
Sbjct: 341 GLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMP 400
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+V+TY T+I+ C + A+ LL+ M CKP+ +Y +LK C +R L+
Sbjct: 401 DVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLM 460
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ M + ++ T+ +L+ L + G +E A ++M+ G P +Y + + L K
Sbjct: 461 SQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 520
Query: 525 -RLGNAKERINKLLAHAKEQKTF 546
+ A E +N ++ T
Sbjct: 521 GKTDEALELLNVMVNKGMSPNTI 543
>gi|125555457|gb|EAZ01063.1| hypothetical protein OsI_23091 [Oryza sativa Indica Group]
Length = 552
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/421 (24%), Positives = 192/421 (45%), Gaps = 21/421 (4%)
Query: 132 QTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN 191
++LRRF L P F P +DV + ++ E++ D
Sbjct: 63 RSLRRFPGRLAPTLLSFNLLLKCVCSSLVPRDPRRYLDVALR-----ILHEIIPGWDLAP 117
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
+ + T ST++ L GR DDAV M GV A + ++ +++ V+ A
Sbjct: 118 DKF----TYSTVVSALADAGRVDDAVALVHEMVADGVVA-AEAFNPVLRAMLRAGDVKGA 172
Query: 252 YKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
K+F ++ K C+P ++ +N+L+HG + A M+ M ++G P V++Y ++
Sbjct: 173 AKLFEFMQLKGCVP-TAATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVD 231
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
R + +EM+ G + Y+ V+ K+ +I+ ALKV+E M + P
Sbjct: 232 GLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRP 291
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ YS++I L+ G++ +A +F +M PN++TY +MI + AL +
Sbjct: 292 NVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIITYGSMIQGYFKIGDTSRALSVW 351
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
++M C P+ +Y+ L+ C R+K + HM + D Y S+++GL S
Sbjct: 352 EEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVS 411
Query: 490 GKLELACSFFEEMISKG-----IVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
G ++ F +M++ G ++ Y+ +L+ L K L A + +N++L +
Sbjct: 412 GMVDGGLRLFYDMLASGHADPDVISYNV---LLDGLLLAKDLPRAMDLLNRMLDQGCDPD 468
Query: 545 T 545
T
Sbjct: 469 T 469
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 152/321 (47%), Gaps = 10/321 (3%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
N ++ LR + D+ A F + + + G + T YN +V L + +++
Sbjct: 157 NPVLRAMLR--AGDVKGAAKLFEFMQLK-GCVPTAATYNVLVHGLLVCGRAGAAMGVMRR 213
Query: 187 MDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
M+ G V + T ++ LVR GR DA + M++ G+ ++ S ++ K
Sbjct: 214 MER--EGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLARNEFVYSTVITGFCKS 271
Query: 246 NSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
++ A KV+ E P+ + ++ +I G K+ +A+ +EM +P++++
Sbjct: 272 GEIDCALKVW-EAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIDSKCAPNIIT 330
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y I+ Y + D + +EM GC P+ ++Y+I+++ L ++ +A+ V++ M
Sbjct: 331 YGSMIQGYFKIGDTSRALSVWEEMIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHML 390
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV-PNVLTYNTMISSACARSEE 422
C PDT Y+S+I L +G V +F DM G P+V++YN ++ +
Sbjct: 391 DRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDL 450
Query: 423 ENALKLLQKMEEDLCKPDCET 443
A+ LL +M + C PD T
Sbjct: 451 PRAMDLLNRMLDQGCDPDTVT 471
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/280 (20%), Positives = 110/280 (39%), Gaps = 25/280 (8%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+Y+ M+ L K L +EM + + ++ T ++++ + G A+ +
Sbjct: 295 LYSAMIGGLANFGKMTEAELLFREMID-SKCAPNIITYGSMIQGYFKIGDTSRALSVWEE 353
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTR 280
M G + + S+L++ L ++ A V+ D C P + + +I G C +
Sbjct: 354 MIGAGCMPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAP-DTIAYTSMIKGLCVSG 412
Query: 281 KVDDAQKAMKEMFQQGFS-PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
VD + +M G + PDV+SY ++ KD + D L M ++GC P +T
Sbjct: 413 MVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTC 472
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
I + G ++ F L+ L R A E+ M
Sbjct: 473 NIFLREFGAGERKGR-----------------EFLEGLVVRLCDRRRNMAAGEVLMVMLA 515
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+ +VP + ++ C R + +++ K +++ P
Sbjct: 516 KYIVPEAPIWEMVVRDVCRR---KRVWRVIDKCWDEIWGP 552
>gi|225460540|ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
[Vitis vinifera]
gi|296081020|emb|CBI18524.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 222/454 (48%), Gaps = 12/454 (2%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVS---VSNSLVEQTLRRF----SNDLTPAFG 146
++++D++++I++ + PD + + V +SN+ VE L R SN AF
Sbjct: 40 KSEIDRVTRIIN-DHPFPDHPLHSTLIQHVPKHLLSNTFVENVLGRLFAAHSNGFK-AFE 97
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF ++ + + + + + + +L + + F WEL++E+ + + ++L +MS ++ R
Sbjct: 98 FFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKAWELMEEIQQTHPSLLTLKSMSIMLSR 157
Query: 207 LVRGGRYDDAVEAFRGMKK---YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
+ + Y+D +EAF M+K +G E +VL+ ++ A VF +
Sbjct: 158 IAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNVLLRAFCTQRQMKEARSVFHKMHSRFS 217
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+++ NIL+ G+ ++ V + EM ++GF P+ V+Y I+ YC++ F
Sbjct: 218 PNTKTMNILLLGFKESGDVTAVELFYHEMIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRL 277
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
L+EM++ C P++ T T ++H G A+ I+ A +++ ++ + PD Y++ + L +
Sbjct: 278 LEEMEKANCPPTLETITTLIHGAGVAQNISRARELFNEISIRNLQPDIGVYNAFMSSLIR 337
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
+ V+ A + ++M+++G+ + +TY+TM + E +L KM P T
Sbjct: 338 SREVQSALMLMDEMEEEGIGHDSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRT 397
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
L+K C+ +++ + L ++ LV GL GK++ A ++ +
Sbjct: 398 IVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTL 457
Query: 504 SKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
+G ++MLE L + G ++++++
Sbjct: 458 ERGRPMSEGVFRMLERYLVEAGEGEMLWKLDQMI 491
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 184/387 (47%), Gaps = 14/387 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++D KS EL+ EM + S T S ++ L A E M
Sbjct: 419 YNLLIDGYLKSHDMAKACELLAEM-KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-----FNILIHGWCK 278
+ GV+ + + TL+K E Y++ +E + + + +N LI G C+
Sbjct: 478 IRNGVKPNV----FMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCR 533
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+KV++A+ + +M ++G P+ +Y FI Y + + + + K+M G P+ +
Sbjct: 534 AKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVI 593
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YTI++ EAL ++ M +PD YS++I LSK G+ K+A +F
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
K GVVP+V YN++IS C + E A +L +M + P+ Y L+ C+ +
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVT 713
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
L + + D+ D TY++++ G +SG L A F+EMISKGI P Y +L
Sbjct: 714 KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 773
Query: 519 EKLEKKRLGNAKERINKLLAHAKEQKT 545
+ K+ GN ++ ++ L H +QK+
Sbjct: 774 DGCGKE--GNLEKALS--LFHEAQQKS 796
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 181/380 (47%), Gaps = 4/380 (1%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM-STIMRRLVRGGRYDDAVE 218
+P Y+ ++ L S E++ +M + NG M T+++ V+ RY+ A+E
Sbjct: 450 SPFTYSVLISGLCHSSDLQKANEVLDQM--IRNGVKPNVFMYGTLIKAYVQESRYEMAIE 507
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWC 277
+ M GV D + L+ L + VE A + ++ + I ++ + I+ +
Sbjct: 508 LLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYS 567
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K+ ++ A++ K+M G P+ V YT I+ +C + + T K M EKG P +
Sbjct: 568 KSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIR 627
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y+ ++H+L K + EA+ V+ K +PD Y+SLI K G ++ A++++++M
Sbjct: 628 AYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM 687
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
G+ PN++ YNT+I+ C E A +L ++EE PD TY+ ++ C+ +
Sbjct: 688 LHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNL 747
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M +S D Y L+ G + G LE A S F E K + + ++
Sbjct: 748 TEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLI 807
Query: 518 EEKLEKKRLGNAKERINKLL 537
+ + ++ A+E + ++
Sbjct: 808 DSFCKHGKVIEARELFDDMV 827
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 159/327 (48%), Gaps = 9/327 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T + + L + G D+A+E + M + G+ D ++L+D K + A +F
Sbjct: 275 NLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIF 334
Query: 256 LEFKDCIPLSSQ-----IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+ +P S + LI G+ K +++A + EM +G +VV+Y I
Sbjct: 335 ----ESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGG 390
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
+ + K EM G +P TY +++ K+ + +A ++ +MK+ P
Sbjct: 391 IAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPS 450
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
YS LI L + ++ ANE+ + M + GV PNV Y T+I + S E A++LL+
Sbjct: 451 PFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLK 510
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
M + PD Y L+ CR K+++ LL M + + +A TY + + +SG
Sbjct: 511 IMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSG 570
Query: 491 KLELACSFFEEMISKGIVPYHSTYKML 517
++++A +F++M+S GIVP + Y +L
Sbjct: 571 EIQVAERYFKDMLSSGIVPNNVIYTIL 597
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 127/251 (50%), Gaps = 1/251 (0%)
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K+C P + +N I G C+T VD+A + K M ++G PD +YT ++ +C++K +
Sbjct: 270 KECKP-NLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSK 328
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + M G P+ TYT ++ K I EAL++ ++M + + Y+++I
Sbjct: 329 EAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMI 388
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
++KAG + A +F +M G+ P+ TYN +I + A +LL +M+
Sbjct: 389 GGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLT 448
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P TY+ L+ C ++ N +L M +N V + Y +L++ ++ + E+A
Sbjct: 449 PSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIEL 508
Query: 499 FEEMISKGIVP 509
+ MI+ G++P
Sbjct: 509 LKIMIANGVLP 519
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 146/331 (44%), Gaps = 3/331 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFN 270
R +A F M G+ + + L+D +K ++E A ++ E + L+ +N
Sbjct: 326 RSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYN 385
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+I G K ++ A EM G PD +Y I+ Y + D K + L EM+ +
Sbjct: 386 AMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKAR 445
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
PS TY++++ L + + +A +V ++M + P+ Y +LI + R + A
Sbjct: 446 KLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMA 505
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+ + M GV+P++ YN +I C + E A LL M E KP+ TY + +
Sbjct: 506 IELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINL 565
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
+ ++V M + + + Y L++G + G A S F+ M+ KG++P
Sbjct: 566 YSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPD 625
Query: 511 HSTYKMLEEKLEKKRLGNAKERINKLLAHAK 541
Y + L K G KE + L K
Sbjct: 626 IRAYSAIIHSLSKN--GKTKEAMGVFLKFLK 654
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 175/358 (48%), Gaps = 5/358 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGR 212
+TG + +YN+++ K +L EM L+NG ++ +T++ L + G
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEM--LHNGINPNIVVYNTLINGLCKLGE 711
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNI 271
A E F +++ + D S ++D K ++ A+K+F E I I+ I
Sbjct: 712 VTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCI 771
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G K ++ A E QQ + ++ I+ +C+ + + +M +K
Sbjct: 772 LIDGCGKEGNLEKALSLFHEA-QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKK 830
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P+++TYTI++ A GKA+ + EA +++ M++ + +P+T Y+SL+ ++ G
Sbjct: 831 LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMI 890
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+F+DM+ +G+ + + Y M S+ C + ALKLL K + K + + + L+
Sbjct: 891 SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHL 950
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C++K++ + LL+ M K ++S+ + T +L+ G +SG + A M G VP
Sbjct: 951 CKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 1008
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 101/218 (46%), Gaps = 2/218 (0%)
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+G P++I +M L KA + KVY M +PD Y+++I K G V
Sbjct: 201 EGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIK 260
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
+ +M+K+ PN+ TYN I C + AL++ + M E PD TY L+
Sbjct: 261 GKMVLSEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVD 319
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C++KR K + M + ++ + TY +L+ G I+ G +E A +EMI++G+
Sbjct: 320 GFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKL 379
Query: 510 YHSTYKMLEEKLEKK-RLGNAKERINKLLAHAKEQKTF 546
TY + + K + A N++L E T+
Sbjct: 380 NVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTW 417
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/281 (21%), Positives = 124/281 (44%), Gaps = 6/281 (2%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
S +LT AF F ++ G +Y ++D GK L E + + G SL
Sbjct: 744 SGNLTEAFKLFDEMISK-GISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVG--SL 800
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL- 256
+ ++++ + G+ +A E F M + + ++L+D K +E A ++FL
Sbjct: 801 SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 860
Query: 257 -EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E ++ IP ++ + L+ + + K+M +G + D ++Y YC+E
Sbjct: 861 METRNIIP-NTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEG 919
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ L + +G K + ++ L K KQI+ L++ +M ++ + +
Sbjct: 920 KSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCN 979
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+L+ K+G +A+++ M++ G VP L+ IS+
Sbjct: 980 TLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTDSISTG 1020
>gi|15221377|ref|NP_177613.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207514|sp|Q9SSF9.1|PP123_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g74750
gi|5882748|gb|AAD55301.1|AC008263_32 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|332197508|gb|AEE35629.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 855
Score = 149 bits (376), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 111/410 (27%), Positives = 192/410 (46%), Gaps = 16/410 (3%)
Query: 55 FDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSE-----NHETDVDKISKILSKQYQ 109
+ S D+ +I S+ G+ + R E +++ R N V+ +S IL ++++
Sbjct: 252 YSVHSSDDRTIISSVEGFGKPSR--EMMKVTPRTAPTPRQHCNPGYVVENVSSIL-RRFK 308
Query: 110 SPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVD 169
EAL G + Q L++ N A GFF W K Q G+ H Y TMV
Sbjct: 309 WGHAAEEALHNFGFRMDAYQANQVLKQMDN-YANALGFFYWLKRQPGFKHDGHTYTTMVG 367
Query: 170 VLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV 228
LG++K+F + +L+ EM + +G + T + ++ R +A+ F M++ G
Sbjct: 368 NLGRAKQFGEINKLLDEM--VRDGCKPNTVTYNRLIHSYGRANYLKEAMNVFNQMQEAGC 425
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NILIHGWCKTRKVDDAQ 286
E D L+D K ++ A ++ ++ LS F +++I+ K + A
Sbjct: 426 EPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEA-GLSPDTFTYSVIINCLGKAGHLPAAH 484
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
+ EM QG +P++V++ I + + +++ ++MQ G +P +TY+IVM L
Sbjct: 485 RLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLYRDMQNAGFQPDKVTYSIVMEVL 544
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
G + EA V+ +M+ + +PD Y L+ + KAG V A + ++ M + G+ PNV
Sbjct: 545 GHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKAGNVDKAWQWYQAMLQAGLRPNV 604
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
T N+++S+ A LLQ M P +TY LL CC R
Sbjct: 605 PTCNSLLSTFLRVHRMSEAYNLLQSMLALGLHPSLQTYTLLLS-CCTDAR 653
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 164/350 (46%), Gaps = 11/350 (3%)
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT-RALSVLMDTLVKGNSVE 249
N GYV + +S+I+RR G ++A+ F G D +A VL N++
Sbjct: 292 NPGYV-VENVSSILRRFKWGHAAEEALHNF------GFRMDAYQANQVLKQMDNYANALG 344
Query: 250 HAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
Y +L+ + + ++ + ++ + K + EM + G P+ V+Y I
Sbjct: 345 FFY--WLKRQPGFKHDGHTYTTMVGNLGRAKQFGEINKLLDEMVRDGCKPNTVTYNRLIH 402
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
Y R ++ + +MQE GC+P +TY ++ KA ++ A+ +Y++M+ P
Sbjct: 403 SYGRANYLKEAMNVFNQMQEAGCEPDRVTYCTLIDIHAKAGFLDIAMDMYQRMQEAGLSP 462
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
DT YS +I L KAG + A+ +F +M QG PN++T+N MI+ E ALKL
Sbjct: 463 DTFTYSVIINCLGKAGHLPAAHRLFCEMVGQGCTPNLVTFNIMIALHAKARNYETALKLY 522
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ M+ +PD TY+ ++++ ++ + M + + D Y LV ++
Sbjct: 523 RDMQNAGFQPDKVTYSIVMEVLGHCGFLEEAEGVFAEMQRKNWVPDEPVYGLLVDLWGKA 582
Query: 490 GKLELACSFFEEMISKGIVPYHST-YKMLEEKLEKKRLGNAKERINKLLA 538
G ++ A +++ M+ G+ P T +L L R+ A + +LA
Sbjct: 583 GNVDKAWQWYQAMLQAGLRPNVPTCNSLLSTFLRVHRMSEAYNLLQSMLA 632
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 166/333 (49%), Gaps = 8/333 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ + +T++ + R G D A R M + GV D L+ L + +E A VF
Sbjct: 274 TVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVF 333
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ + P ++ +F ILI CK + + +EM ++G PD V+Y + CR
Sbjct: 334 EKMCGRGMKP-NAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCR 392
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+D + + EM+ G +P +TYT ++ K ++++ A+++ + M ++ D
Sbjct: 393 ARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVT 452
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI LSKAGR DA + +M + G+ P+ TY +I + C + + + L+LL++M+
Sbjct: 453 YTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQ 512
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
KP TY ++ C+ +MK + LL M VS D TY L+ G + GK+
Sbjct: 513 NKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV- 571
Query: 494 LACSFFEEMIS-KGIVPYHSTYKMLEEKLEKKR 525
+ EE+ S KG VP Y + ++ KK+
Sbjct: 572 ---TDIEELKSAKGTVPDLGVYTSIVGEIVKKK 601
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 137/279 (49%), Gaps = 1/279 (0%)
Query: 247 SVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
+ A +L+ D +P +++FN+L+ + ++ AQ EM +G VVS+
Sbjct: 220 TAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFN 279
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I CR D + + M E G P V TY ++ L + +I +A V+EKM
Sbjct: 280 TMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGR 339
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
P+ ++ LI K G + E+ +M+++GV P+ +TYN +++ C + ++A
Sbjct: 340 GMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSA 399
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
++ +M +PD TY L+ C+++ + + + +M V +D TY +L+ G
Sbjct: 400 SGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISG 459
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
L ++G+ A EM+ G+ P ++TY M+ + +K
Sbjct: 460 LSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRK 498
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 117/243 (48%)
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
++ G P+ + + R + + EMQ +G + +V+++ ++ + +A
Sbjct: 230 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 289
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++ A ++ +M PD Y +LI L + GR++DA +FE M +G+ PN + +
Sbjct: 290 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 349
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I + C + + E L+L ++M E +PD TY ++ CR + +K + ++ M
Sbjct: 350 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 409
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
+ D TY +L+ G + +L++A + M+++G+ TY L L K
Sbjct: 410 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 469
Query: 531 ERI 533
ER+
Sbjct: 470 ERV 472
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%)
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EA Y ++ P+ ++ L+ L + G + A +F++M+ +GV V+++NTMI
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
S C + + A L ++M E PD TY L++ CR R++ + M +
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+A + L+ + G E EM +G+ P TY + L + R
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRAR 394
>gi|226497014|ref|NP_001152455.1| GTP binding protein [Zea mays]
gi|195656487|gb|ACG47711.1| GTP binding protein [Zea mays]
Length = 455
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 148/322 (45%), Gaps = 4/322 (1%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V + ++LS + AL G ++ + LRR N P+ FF +A G
Sbjct: 53 VGALCRVLSDFRGPRHDLRAALSGFAPRLTPAAAAAVLRRCRNLPVPSLRFFLFAAAMPG 112
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
+ H P+ + L ++ F L+ L + +L +S + R R G +DA
Sbjct: 113 FTHLPDSLLILAGSLAGTRLFPLLRSL---LSDLPRSALSRDLFPLLFRAYARAGLPEDA 169
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGW 276
+ AF M+++ L L+ TL VEHA F E LS++ + ILI GW
Sbjct: 170 IRAFSSMERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRESPFQFDLSAKTYTILISGW 229
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE-KGCKPS 335
AQK EM ++G PDV +Y I+ CR D + LK+MQ +G P
Sbjct: 230 AVVASPVKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLKDMQRSRGLAPD 289
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
TY + + +K AL+V ++M++ P+ Y+++I +L + G V ++ I
Sbjct: 290 AATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELGEVDESYNILN 349
Query: 396 DMKKQGVVPNVLTYNTMISSAC 417
+M G P+V +YNT++++ C
Sbjct: 350 EMATYGEKPDVWSYNTLLNTHC 371
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 30/226 (13%)
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV---------VSYTCFIEH---Y 311
LS +F +L + + +DA +A M + F P V +S+ +EH +
Sbjct: 148 LSRDLFPLLFRAYARAGLPEDAIRAFSSMERFCFLPTVADLHSLLFTLSHNGLVEHAEAF 207
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
RE F + D + K TYTI++ +A K++++M PD
Sbjct: 208 FRESPF-QFDLSAK------------TYTILISGWAVVASPVKAQKLFDEMIERGVQPDV 254
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKK-QGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y++LI L + G V A E +DM++ +G+ P+ TY + SACA + AL++L
Sbjct: 255 PAYNALIDALCRGGDVALAQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLD 314
Query: 431 KMEEDLCKPDCETYAPLLKMCCR----KKRMKVLNFLLTHMFKNDV 472
+M P+ TY ++++ C + +LN + T+ K DV
Sbjct: 315 RMRARSLTPNVFTYNAVIRLLCELGEVDESYNILNEMATYGEKPDV 360
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 90/214 (42%), Gaps = 35/214 (16%)
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK---------- 388
+ ++ A +A +A++ + M+ LP + SL+F LS G V+
Sbjct: 153 FPLLFRAYARAGLPEDAIRAFSSMERFCFLPTVADLHSLLFTLSHNGLVEHAEAFFRESP 212
Query: 389 ------------------------DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
A ++F++M ++GV P+V YN +I + C +
Sbjct: 213 FQFDLSAKTYTILISGWAVVASPVKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVAL 272
Query: 425 ALKLLQKMEEDL-CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A + L+ M+ PD TY P L+ C K + +L M ++ + TY +++
Sbjct: 273 AQEQLKDMQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVI 332
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
R L E G+++ + + EM + G P +Y L
Sbjct: 333 RLLCELGEVDESYNILNEMATYGEKPDVWSYNTL 366
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/332 (28%), Positives = 165/332 (49%), Gaps = 6/332 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ + +T++ + R G D A R M + GV D L+ L + +E A VF
Sbjct: 150 TVVSFNTMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVF 209
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ + ++ +F ILI CK + + +EM ++G PD V+Y + CR
Sbjct: 210 EKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA 269
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+D + + EM+ G +P +TYT ++ K ++++ A+++ + M ++ D Y
Sbjct: 270 RDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTY 329
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI LSKAGR DA + +M + G+ P+ TY +I + C + + + L+LL++M+
Sbjct: 330 TALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQN 389
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
KP TY ++ C+ +MK + LL M VS D TY L+ G + GK+
Sbjct: 390 KGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKV-- 447
Query: 495 ACSFFEEMIS-KGIVPYHSTYKMLEEKLEKKR 525
+ EE+ S KG VP Y + ++ KK+
Sbjct: 448 --TDIEELKSAKGTVPDLGVYTSIVGEIVKKK 477
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 137/279 (49%), Gaps = 1/279 (0%)
Query: 247 SVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
+ A +L+ D +P +++FN+L+ + ++ AQ EM +G VVS+
Sbjct: 96 TAPEACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFN 155
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I CR D + + M E G P V TY ++ L + +I +A V+EKM
Sbjct: 156 TMISGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGR 215
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
P+ ++ LI K G + E+ +M+++GV P+ +TYN +++ C + ++A
Sbjct: 216 GMKPNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSA 275
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
++ +M +PD TY L+ C+++ + + + +M V +D TY +L+ G
Sbjct: 276 SGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISG 335
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
L ++G+ A EM+ G+ P ++TY M+ + +K
Sbjct: 336 LSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRK 374
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 117/243 (48%)
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
++ G P+ + + R + + EMQ +G + +V+++ ++ + +A
Sbjct: 106 QLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGMCRAG 165
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++ A ++ +M PD Y +LI L + GR++DA +FE M +G+ PN + +
Sbjct: 166 DLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFT 225
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I + C + + E L+L ++M E +PD TY ++ CR + +K + ++ M
Sbjct: 226 ILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSA 285
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
+ D TY +L+ G + +L++A + M+++G+ TY L L K
Sbjct: 286 GLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADA 345
Query: 531 ERI 533
ER+
Sbjct: 346 ERV 348
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%)
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EA Y ++ P+ ++ L+ L + G + A +F++M+ +GV V+++NTMI
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
S C + + A L ++M E PD TY L++ CR R++ + M +
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+A + L+ + G E EM +G+ P TY + L + R
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRAR 270
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 170/333 (51%), Gaps = 6/333 (1%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF K G + Y +++ L K+ +E+ ++M E + + +L T + +M +
Sbjct: 221 FFEMGKL--GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQE-DGVFPNLYTYNCVMNQ 277
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLS 265
L + GR DA + F M++ GV + + L+ L + + A KV + K D I +
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+N LI G+C K+ A +++ +G SP +V+Y + +CR+ D +K
Sbjct: 338 LITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVK 397
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM+E+G KPS +TYTI++ ++ + +A+++ M+ +PD YS LI G
Sbjct: 398 EMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKG 457
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
++ +A+ +F+ M ++ PN + YNTMI C ALKLL++MEE P+ +Y
Sbjct: 458 QMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYR 517
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
++++ C++++ K L+ M D +D T
Sbjct: 518 YMIEVLCKERKSKEAERLVEKMI--DSGIDPST 548
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 153/316 (48%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
I+ V+ + ++ F M G + + L+ +V +S + F E K
Sbjct: 99 VIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSK 158
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ L F ILI G C+ +++ + + E+ + GFSP+VV YT I+ C++ + K
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D EM + G + TYT++++ L K + ++YEKM+ D P+ Y+ ++ L
Sbjct: 219 DLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQL 278
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K GR KDA ++F++M+++GV N++TYNT+I C + A K++ +M+ D P+
Sbjct: 279 CKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNL 338
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ C ++ L + +S TY LV G G A +E
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKE 398
Query: 502 MISKGIVPYHSTYKML 517
M +GI P TY +L
Sbjct: 399 MEERGIKPSKVTYTIL 414
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/366 (23%), Positives = 167/366 (45%), Gaps = 7/366 (1%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMS--TIMRRLVRGGR 212
G++ +N ++ + S F W E N V L S +++ G
Sbjct: 123 NGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE----NKSKVVLDVYSFGILIKGCCEAGE 178
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNI 271
+ + + + ++G + + L+D K +E A +F E K + + + + +
Sbjct: 179 IEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTV 238
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI+G K + ++M + G P++ +Y C + C++ + EM+E+G
Sbjct: 239 LINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERG 298
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+++TY ++ L + ++NEA KV ++MKSD P+ Y++LI G++ A
Sbjct: 299 VSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKAL 358
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ D+K +G+ P+++TYN ++S C + + A K++++MEE KP TY L+
Sbjct: 359 SLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTF 418
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
R M+ L M + + D TY+ L+ G G++ A F+ M+ K P
Sbjct: 419 ARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNE 478
Query: 512 STYKML 517
Y +
Sbjct: 479 VIYNTM 484
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/355 (23%), Positives = 172/355 (48%), Gaps = 4/355 (1%)
Query: 181 WELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
++L+ E+ E G+ ++ +T++ + G + A + F M K G+ + R +VL+
Sbjct: 183 FDLLIELTEF--GFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLI 240
Query: 240 DTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
+ L K + ++++ + + D + + +N +++ CK + DA + EM ++G S
Sbjct: 241 NGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVS 300
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
++V+Y I CRE + + + +M+ G P++ITY ++ ++ +AL +
Sbjct: 301 CNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+KS P Y+ L+ + G A ++ ++M+++G+ P+ +TY +I +
Sbjct: 361 CRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFAR 420
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
E A++L MEE PD TY+ L+ C K +M + L M + + +
Sbjct: 421 SDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVI 480
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
Y +++ G + G A +EM K + P ++Y+ + E L K+R ER+
Sbjct: 481 YNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERL 535
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 138/332 (41%), Gaps = 57/332 (17%)
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLSSQIFN----------------------ILIHGWCKT 279
L+ GN HA + L+ + SQ F ++I+ + ++
Sbjct: 49 LLSGNLFSHAQSLLLQVISG-KIHSQFFTSSSLLHYLTESETSKTKFRLYEVIINSYVQS 107
Query: 280 RKVDDAQKAMKEMFQQGFSP----------------------------------DVVSYT 305
+ ++ + EM GF P DV S+
Sbjct: 108 QSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFG 167
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I+ C + K D L E+ E G P+V+ YT ++ K +I +A ++ +M
Sbjct: 168 ILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKL 227
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
+ + Y+ LI L K G K E++E M++ GV PN+ TYN +++ C ++A
Sbjct: 228 GLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDA 287
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
++ +M E + TY L+ CR+ ++ N ++ M + ++ + TY +L+ G
Sbjct: 288 FQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKML 517
GKL A S ++ S+G+ P TY +L
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNIL 379
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 98/374 (26%), Positives = 171/374 (45%), Gaps = 43/374 (11%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ S ++ + R Y + ++ M +G+ +T L++L+++ N + A+ V
Sbjct: 53 SIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVL 112
Query: 256 LEFKDCIPL----SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
D + L S+ F LI G C K+ +A + +M +GF PDV++Y I
Sbjct: 113 ---GDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGL 169
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C+ + L+ M+++ C+P+V+ Y+ ++ +L K +Q+ EAL ++ M + P+
Sbjct: 170 CKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNN 229
Query: 372 SFYSSLIFILSKAGRVKDA-------------------NEIFEDMKKQGVV--------- 403
YSSLI L G K+A N + + + K+G+V
Sbjct: 230 FTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDV 289
Query: 404 -------PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
P+V+TYN+++ C RSE + + M C P +Y L+ C+ +
Sbjct: 290 MIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQI 349
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
M L M + + D TY +L+ GL G+L A + F EM+ G +P TY++
Sbjct: 350 MDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRI 409
Query: 517 LEEKLEKK-RLGNA 529
L + L K RL A
Sbjct: 410 LFDYLCKNHRLAEA 423
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 168/366 (45%), Gaps = 4/366 (1%)
Query: 155 TGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
TG P++ Y T+++ L K ++ M++ N ++ STI+ L + +
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQ-RNCRPTVVVYSTIIDSLCKDRQ 209
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNI 271
+A+ F M G+ + S L+ L + A ++F + Q+ FN
Sbjct: 210 LTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNT 269
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+ CK V A + M Q PDVV+Y ++ +C + K + M KG
Sbjct: 270 LVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKG 329
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C PSVI+YT +++ K + +++A+ ++E+M +PDT Y++LI L GR++DA
Sbjct: 330 CVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAI 389
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+F +M G +P+++TY + C A+ LL+ +E PD Y+ ++
Sbjct: 390 ALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGM 449
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
CR ++ L + + + D TY ++ GL + G L A F EM G P
Sbjct: 450 CRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNA 509
Query: 512 STYKML 517
TY ++
Sbjct: 510 CTYNLI 515
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 170/376 (45%), Gaps = 4/376 (1%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVE 218
T +Y+T++D L K ++ L +M L G + T S+++ L G + +A+
Sbjct: 193 TVVVYSTIIDSLCKDRQLTEALSLFSDM--LAKGISPNNFTYSSLIHGLCILGHWKEAIR 250
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
F M + D + L+D L K G V+ Y V + + + +N L+ G C
Sbjct: 251 LFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHC 310
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
++ M ++G P V+SYT I YC+ + K +EM ++G P +
Sbjct: 311 LRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTV 370
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++H L ++ +A+ ++ +M +PD Y L L K R+ +A + + +
Sbjct: 371 TYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVI 430
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ + P++ Y+ ++ C E E A L K+ PD TY ++ C++ +
Sbjct: 431 EGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLL 490
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ L M +N S +A TY + RG + + + A F+EM+S+G ST +L
Sbjct: 491 AEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLL 550
Query: 518 EEKLEKKRLGNAKERI 533
E L L + ++I
Sbjct: 551 VEMLSDDGLDQSVKQI 566
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA M + P +V ++ + R K + V K+M G + T I
Sbjct: 35 IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++ ++ A V + P T+ +++LI L G++ +A ++F+ M +G
Sbjct: 95 LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+VLTY T+I+ C A++ L+ ME+ C+P Y+ ++ C+ +++
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + M +S + TY+SL+ GL G + A F MI + I+P T+ L + L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274
Query: 522 EKKRL 526
K+ +
Sbjct: 275 CKEGM 279
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 126/308 (40%), Gaps = 36/308 (11%)
Query: 246 NSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
N+++ A +F P S + F+ L+ + + K+M G + +
Sbjct: 33 NTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTL 92
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
I +C L ++ + G +PS T+T ++ L +I EAL++++KM
Sbjct: 93 NILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTG 152
Query: 365 DDCLPDTSFYSSLIFILSKAG-----------------------------------RVKD 389
+ PD Y +LI L K G ++ +
Sbjct: 153 EGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTE 212
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A +F DM +G+ PN TY+++I C + A++L M PD T+ L+
Sbjct: 213 ALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVD 272
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C++ + ++++ M ++D+ D TY SL+ G ++ + F+ M+ KG VP
Sbjct: 273 ALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVP 332
Query: 510 YHSTYKML 517
+Y L
Sbjct: 333 SVISYTTL 340
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 167/330 (50%), Gaps = 1/330 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T+ +++ R R DAV M + G D A + ++D+L K V A F E
Sbjct: 156 VTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKE 215
Query: 258 F-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ I + + L++G C + + +DA + +++M ++ +P+V++Y+ ++ + +
Sbjct: 216 IGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGK 275
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + +EM P ++TY+ +++ L +I+EA ++++ M S C PD Y++
Sbjct: 276 VLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNT 335
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI KA RV+D ++F M ++G+V N +TYNT+I + + A + +M+
Sbjct: 336 LINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFG 395
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD TY LL C ++ + M K+++ +D TY ++++G+ ++GK+E A
Sbjct: 396 VSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAW 455
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
F + KG+ P TY + L K L
Sbjct: 456 GLFCSLSLKGLKPDIVTYTTMMSGLCTKGL 485
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 166/330 (50%), Gaps = 11/330 (3%)
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+ S+ + ++ +V+ +YD + + M+ G+ D +++++ V A
Sbjct: 82 FPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALS 141
Query: 254 VFLEF------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
V + D + + S L++G+C+ +V DA + +M + G+ PD+V+Y
Sbjct: 142 VLGKMLKLGYEPDRVTIGS-----LVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAI 196
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I+ C+ + D KE+ KG +P+V+TYT +++ L + + N+A ++ M
Sbjct: 197 IDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKI 256
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P+ YS+L+ K G+V +A EIFE+M + + P+++TY+++I+ C + A +
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQ 316
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+ M C PD +Y L+ C+ KR++ L M + + + TY +L++G
Sbjct: 317 MFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFF 376
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ G ++ A FF +M S G+ P TY +L
Sbjct: 377 QVGDVDKAQEFFSQMDSFGVSPDIWTYNIL 406
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 109/241 (45%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+ DA +EM + P +V + + + K + V K+M+ G + + T+
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
IV++ Q++ AL V KM PD SL+ + RV DA + + M +
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+++ YN +I S C +AL +++ +P+ TY L+ C R
Sbjct: 185 GYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDA 244
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
LL M K ++ + TY++L+ +++GK+ A FEEM+ I P TY L
Sbjct: 245 ARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLING 304
Query: 521 L 521
L
Sbjct: 305 L 305
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/249 (23%), Positives = 115/249 (46%), Gaps = 4/249 (1%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP + Y+ ++D K+ K E+ +EM ++ + T S+++ L R D+A
Sbjct: 257 TPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSID-PDIVTYSSLINGLCLHDRIDEAN 315
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGW 276
+ F M G D + + L++ K VE K+F + +++ + +N LI G+
Sbjct: 316 QMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGF 375
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ VD AQ+ +M G SPD+ +Y + C K ++MQ+ +
Sbjct: 376 FQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDI 435
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+TYT V+ + K ++ +A ++ + PD Y++++ L G + ++
Sbjct: 436 VTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTK 495
Query: 397 MKKQGVVPN 405
MK++G++ N
Sbjct: 496 MKQEGLMKN 504
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 102/212 (48%), Gaps = 3/212 (1%)
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ +EM + PS++ + ++ A+ K K+ + + + +KM+ D ++ +I
Sbjct: 71 NLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFNIVINCF 130
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+V A + M K G P+ +T ++++ C R+ +A+ L+ KM E +PD
Sbjct: 131 CCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDI 190
Query: 442 ETYAPLLKMCCRKKRMK-VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
Y ++ C+ +R+ L+F + + + + TY +LV GL SG+ A
Sbjct: 191 VAYNAIIDSLCKTRRVNDALDFF-KEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLR 249
Query: 501 EMISKGIVPYHSTYK-MLEEKLEKKRLGNAKE 531
+MI + I P TY +L+ ++ ++ AKE
Sbjct: 250 DMIKRKITPNVITYSALLDAFVKNGKVLEAKE 281
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 96/216 (44%), Gaps = 9/216 (4%)
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+ + + +T++ + R +D ++ FR M + G+ +T + L+ + V+ A +
Sbjct: 327 FPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQE 386
Query: 254 VFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
F + D +S I +NIL+ G C ++ A ++M + D+V+YT I+
Sbjct: 387 FFSQM-DSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGM 445
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C+ + KG KP ++TYT +M L +E +Y KMK + + +
Sbjct: 446 CKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND 505
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
S + G + + E+ + M G P++L
Sbjct: 506 S------MLCLGDGDITISAELIKKMLSCGYAPSLL 535
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 6/157 (3%)
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
++ DA +F +M K P+++ +N ++S+ + + + L +KME + D T+
Sbjct: 65 KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
++ C ++ + +L M K D T SLV G ++ A S ++M+
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKE 542
G P Y + + L K R R+N L KE
Sbjct: 185 GYRPDIVAYNAIIDSLCKTR------RVNDALDFFKE 215
>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
Length = 791
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 169/341 (49%), Gaps = 7/341 (2%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGNSVEHAYKVF 255
+ T +++M L + GR +A + F M K G+E D L+ KG VE +
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
L ++ I +FNILI + K KVD+A +M Q G +P+VV+Y I C+
Sbjct: 361 LMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420
Query: 316 DFRKVDDTL---KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
VDD + ++M ++G P++I YT ++H+L + ++A ++ +M +T
Sbjct: 421 ---SVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
F++S+I K GRV ++ ++F+ M + GV PNV+TY+T+I C + + A KLL M
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
KPDC TY L+ CR RM L M + VS + TY +++GL + +
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
A + + G STY ++ L K L + R+
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRM 638
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 181/410 (44%), Gaps = 78/410 (19%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ + +T++ + G D A + M + D S ++ L KG +++ A +V
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLT 255
Query: 257 EF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC--- 312
K+ + + +N ++HG+C + + +A +K+M G PDVV+Y +++ C
Sbjct: 256 TMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNG 315
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIV------------MHAL-------------- 346
R + RK+ D+ M ++G +P + TY + MHAL
Sbjct: 316 RSTEARKIFDS---MTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHH 372
Query: 347 ---------GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
K ++++EA+ V+ KM+ P+ Y ++I IL K+G V DA FE M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKL-LQKMEEDLC------------------- 437
+G+ PN++ Y ++I S C + + A +L L+ ++ +C
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRV 492
Query: 438 ---------------KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
KP+ TY+ L+ C +M LL+ MF + D TY +L
Sbjct: 493 IESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTL 552
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
+ G +++ A + F+EM+S G+ P TY ++ + L +R AKE
Sbjct: 553 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 157/332 (47%), Gaps = 5/332 (1%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVE-AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
V T + +++ L R DA++ R M + D + ++L+ L N + A +
Sbjct: 120 VEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALE 179
Query: 254 VFLEFKDCIPLSSQ----IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+ D S + +I+G+ K D A EM + SPDVV+Y+ I
Sbjct: 180 LLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIA 239
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
C+ + K + L M + G P+ +TY ++H ++Q EA+ +KM+SD P
Sbjct: 240 ALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEP 299
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D Y+SL+ L K GR +A +IF+ M K+G+ P++ TY T++ + LL
Sbjct: 300 DVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALL 359
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
M + PD + L+ +++++ + + M ++ ++ + TY +++ L +S
Sbjct: 360 DLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKS 419
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
G ++ A +FE+MI +G+ P Y L L
Sbjct: 420 GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 149/316 (47%), Gaps = 1/316 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFN 270
+ D+A+ F M+++G+ + ++ L K SV+ A F + D + + ++
Sbjct: 386 KVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 445
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LIH C K D A++ + EM +G + + + I +C+E + + M
Sbjct: 446 SLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI 505
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G KP+VITY+ ++ A +++EA K+ M S PD Y++LI + R+ DA
Sbjct: 506 GVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+F++M GV PN++TYN ++ A +L + + + + TY +L
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHG 625
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ + ++ D+ ++ T+ ++ L++ G+ + A F S G+VP
Sbjct: 626 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPN 685
Query: 511 HSTYKMLEEKLEKKRL 526
+ TY+++ E + + L
Sbjct: 686 YWTYRLMAENIIGQGL 701
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 45/313 (14%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR-KVDDTLKEM 327
+ ILI C+ ++D A+ + ++GF + +++T ++ C +K +D L+ M
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD-------DCL------------ 368
E C P V + TI++ L + EAL++ M D D +
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKE 209
Query: 369 -------------------PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
PD YSS+I L K + A E+ M K GV+PN +TY
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N+++ C+ + + A+ L+KM D +PD TY L+ C+ R + M K
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML------EEKLEK 523
+ D TY +L++G G L + + M+ GI P H + +L +EK+++
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389
Query: 524 KRLGNAKERINKL 536
L +K R + L
Sbjct: 390 AMLVFSKMRQHGL 402
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 157/399 (39%), Gaps = 96/399 (24%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T ++ L + G DDA+ F M G+ + + L+ +L + + A ++
Sbjct: 405 NVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELI 464
Query: 256 LEFKD-CIPLSSQIFNILIH-----------------------------------GWCKT 279
LE D I L++ FN +IH G+C
Sbjct: 465 LEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLA 524
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSV 336
K+D+A K + MF G PD V+Y I YCR ++DD L KEM G P++
Sbjct: 525 GKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCR---VSRMDDALALFKEMVSSGVSPNI 581
Query: 337 I-----------------------------------TYTIVMHALGKAKQINEALKVYEK 361
I TY I++H L K +EAL++++
Sbjct: 582 ITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 641
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
+ D +T ++ +I L K GR +A ++F G+VPN TY M + +
Sbjct: 642 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 701
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
E +L ME++ C D +LNF++ + + AGTY S
Sbjct: 702 LEELDQLFFSMEDNGCTVDS----------------GMLNFIVRELLQRGEITRAGTYLS 745
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
++ S + A S F +++S G Y ++ L EK
Sbjct: 746 MIDEKHFSLEASTA-SLFIDLLSGG--KYQEYHRFLPEK 781
>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 616
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 179/373 (47%), Gaps = 10/373 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS---------LATMSTIMRRLVRGGRYD 214
YN ++ L +K++ + EL+ EM ++ L +TI+ + + G ++
Sbjct: 216 YNAVLKGLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHE 275
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILI 273
A + M YG++ + + ++ L E A + E F++ PL FNIL+
Sbjct: 276 VANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILV 335
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+C+ VD + +++M + G PDV++YT I +C+E + LK M GCK
Sbjct: 336 DFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCK 395
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ I+YTIV+ L +A++ +A ++ M CLP+ +++LI + K G + A E+
Sbjct: 396 PNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIEL 455
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+ M G P++++Y+T+I + E AL+LL M P+ Y+ + R
Sbjct: 456 LKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSR 515
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+ R + + + V DA Y +++ L + + + A FF M+S G +P ST
Sbjct: 516 EGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNEST 575
Query: 514 YKMLEEKLEKKRL 526
Y +L L + L
Sbjct: 576 YTILIRGLASEGL 588
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 173/357 (48%), Gaps = 8/357 (2%)
Query: 160 TPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP+ MY T++D + K + +++ M ++ +T+++ L R+++A
Sbjct: 255 TPDLRMYATIIDGICKDGHHEVANDILSRMPSYGL-KPNVVCYNTVLKGLCSAERWEEAE 313
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHG 275
+ M + D ++L+D + V+ ++ + + CIP + +I+G
Sbjct: 314 DLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIP-DVITYTTVING 372
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+CK VD+A +K M G P+ +SYT ++ CR + + + + M ++GC P+
Sbjct: 373 FCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPN 432
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+T+ +++ + K +A+++ ++M + C PD YS++I L KAG+ ++A E+
Sbjct: 433 PVTFNTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLN 492
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY-APLLKMCCRK 454
M +G+ PN + Y++M S+ + +++ +++ + D Y A + +C R
Sbjct: 493 VMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRW 552
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
+ + ++F +M N + TY L+RGL G + A E+ S+ V H
Sbjct: 553 ETDRAIDF-FAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRRAVRKH 608
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/337 (23%), Positives = 138/337 (40%), Gaps = 15/337 (4%)
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
+S ++R L GR DA R + G A + ++ + V A ++
Sbjct: 47 LSALIRSLCAAGRTADAA---RALDTAGDAAGVVAYNAMIAGYCRAGQVAAARRLAAAVP 103
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+P ++ + ++ C + DA + EM +G + +E CR FR
Sbjct: 104 --VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
L+ + KGC +V+ A+ + ++E +++ K+ S C PD Y++++
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221
Query: 380 ILSKAGRVKDANEI----------FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
L A R D E+ M + G P++ Y T+I C E A +L
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M KP+ Y +LK C +R + LL MF+ D +D T+ LV ++
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 341
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
G ++ E+M+ G +P TY + K+ L
Sbjct: 342 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 378
>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g02060, chloroplastic; Flags: Precursor
gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 710
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 122/473 (25%), Positives = 214/473 (45%), Gaps = 65/473 (13%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFG--FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
++S + V QTLR PA G FF W + G+ H + + M++ LG+++ +
Sbjct: 65 TISRTTVLQTLRLIK---VPADGLRFFDWVSNK-GFSHKEQSFFLMLEFLGRARNLNVAR 120
Query: 182 ELVKEMDELNNGYVSLAT--MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+ ++ +NG V L ++++R G + ++V+ F+ MK+ G+ + L+
Sbjct: 121 NFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQESVKLFQTMKQMGISPSVLTFNSLL 180
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLS--SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
L+K A+ +F E + ++ S FN LI+G+CK VD+A + K+M
Sbjct: 181 SILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHC 240
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG--CKPSVITYTIVMHALGKAKQINEA 355
+PDVV+Y I+ CR + + L M +K P+V++YT ++ ++I+EA
Sbjct: 241 NPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEA 300
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGR---VKD----------------------- 389
+ V+ M S P+ Y++LI LS+A R +KD
Sbjct: 301 VLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILI 360
Query: 390 -----------ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE---- 434
A ++F++M + P+ +Y+ +I + C R+E + A L ++ E
Sbjct: 361 KAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVL 420
Query: 435 ---DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
D CKP Y P+ + C + K + + K V D +Y +L+ G GK
Sbjct: 421 LGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGK 479
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
+ A M+ + VP TY++L + L K +G A LLAH Q+
Sbjct: 480 FKPAYELLVLMLRREFVPDLETYELLIDGLLK--IGEA------LLAHDTLQR 524
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 159/389 (40%), Gaps = 42/389 (10%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELV 184
NS+V++ R F K Y P++ YNT++D L ++ K + ++
Sbjct: 222 NSMVDEAFRIF--------------KDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVL 267
Query: 185 KEM-DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
M + + + ++ + +T++R D+AV F M G++ + +V +TL+
Sbjct: 268 SGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPN----AVTYNTLI 323
Query: 244 KGNSVEHAYKVFLEFKDCIPLSSQ----------IFNILIHGWCKTRKVDDAQKAMKEMF 293
KG S H Y E KD + + FNILI C +D A K +EM
Sbjct: 324 KGLSEAHRYD---EIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEML 380
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-------CKPSVITYTIVMHAL 346
PD SY+ I C +F + + E+ EK CKP Y + L
Sbjct: 381 NMKLHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYL 440
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
+ +A KV+ ++ + D Y +LI + G+ K A E+ M ++ VP++
Sbjct: 441 CANGKTKQAEKVFRQLMKRG-VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDL 499
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
TY +I E A LQ+M P T+ +L ++K L+T
Sbjct: 500 ETYELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTL 559
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELA 495
M + + + +VR L S + E A
Sbjct: 560 MLEKRIRQNIDLSTQVVRLLFSSAQKEKA 588
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 119/450 (26%), Positives = 210/450 (46%), Gaps = 25/450 (5%)
Query: 69 LAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL--------KG 120
L G+ +R++E + +++ ++ D + ++ +Q +K EA+ KG
Sbjct: 152 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH-NKASEAVALVERMVVKG 210
Query: 121 C--GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPE-MYNTMVDVLGKSKKF 177
C + +++ +R DL K + G + +YNT++D L K K
Sbjct: 211 CQPDLVTYGAVINGLCKRGEPDLALNL----LNKMEKGKIEADVVIYNTIIDGLCKYKHM 266
Query: 178 CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
++L +M E + T + ++ L GR+ DA M + + D +
Sbjct: 267 DDAFDLFNKM-ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNA 325
Query: 238 LMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQ 294
L+D VK + A K++ E K C P +N LI G+CK ++V++ + +EM Q
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFP-DVVAYNTLIKGFCKYKRVEEGMEVFREMSQ 384
Query: 295 QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
+G + V+YT I + + +D K+M G P ++TY I++ L +
Sbjct: 385 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVET 444
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
AL V+E M+ D D Y+++I L KAG+V+D ++F + +GV PNV+TY TM+S
Sbjct: 445 ALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 504
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C + +E A L +M+ED P+ TY L++ R L+ M +
Sbjct: 505 GFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAG 564
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMIS 504
DA T+ LV ++ G+L+ + F +M+S
Sbjct: 565 DASTFG-LVTNMLHDGRLDKS---FLDMLS 590
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 158/329 (48%), Gaps = 4/329 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+TI+ L + DDA + F M+ G++ D + L+ L A ++ +
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLE 313
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS-PDVVSYTCFIEHYCREKDF 317
K+ P FN LI + K K+ +A+K EM + PDVV+Y I+ +C+ K
Sbjct: 314 KNINP-DLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRV 372
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + +EM ++G + +TYT ++H +A+ + A V+++M SD PD Y+ L
Sbjct: 373 EEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNIL 432
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ L G V+ A +FE M+K+ + +++TY TMI + C + E+ L +
Sbjct: 433 LDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGV 492
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KP+ TY ++ CRK + + L M ++ ++GTY +L+R + G +
Sbjct: 493 KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAE 552
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
+EM S G ST+ ++ L RL
Sbjct: 553 LIKEMRSCGFAGDASTFGLVTNMLHDGRL 581
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 156/333 (46%), Gaps = 12/333 (3%)
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IP 263
R++++ + DDA+ F M K S L+ + K N + + + ++ I
Sbjct: 48 RKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGIS 107
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ ++I I+ +C+ ++ A + +M + G+ P +V+ + +C +
Sbjct: 108 HNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVAL 167
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+ +M E G +P +T+T ++H L + + +EA+ + E+M C PD Y ++I L K
Sbjct: 168 VDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCK 227
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
G A + M+K + +V+ YNT+I C ++A L KME KPD T
Sbjct: 228 RGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFT 287
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y PL+ C R + LL+ M + +++ D + +L+ ++ GKL A ++EM+
Sbjct: 288 YNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMV 347
Query: 504 SK-----GIVPYHST------YKMLEEKLEKKR 525
+V Y++ YK +EE +E R
Sbjct: 348 KSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFR 380
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 174/351 (49%), Gaps = 4/351 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L T T++ L + G D A+ + M+K +E D + ++D L +V A +F
Sbjct: 220 LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFT 279
Query: 257 EFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E + I + +N LI C + DA + + +M ++ +P+VV+++ I+ + +E
Sbjct: 280 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 339
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ + EM ++ P + TY+ +++ +++EA ++E M S DC P+ Y+
Sbjct: 340 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI KA RV++ E+F +M ++G+V N +TYNT+I + + A K+ +KM D
Sbjct: 400 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 459
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
PD TY+ LL C+ +++ + ++ K+ + D TY ++ G+ ++GK+E
Sbjct: 460 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 519
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
F + KG+ P Y + +K L KE + L KE T
Sbjct: 520 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGL---KEEADALFREMKEDGTL 567
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 176/366 (48%), Gaps = 4/366 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFR 221
+Y T++D L K L EMD N G ++ T ++++R L GR+ DA
Sbjct: 257 IYTTIIDALCNYKNVNDALNLFTEMD--NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTR 280
M + + + S L+D VK + A K++ E K I ++ LI+G+C
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++D+A+ + M + P+VV+Y I+ +C+ K + + +EM ++G + +TY
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L +A + A K+++KM SD PD YS L+ L K G+++ A +FE ++K
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ P++ TYN MI C + E+ L + KP+ Y ++ CRK +
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+ L M ++ ++GTY +L+R + G + +EM S G V ST M+
Sbjct: 555 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 614
Query: 521 LEKKRL 526
L RL
Sbjct: 615 LHDGRL 620
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 166/363 (45%), Gaps = 10/363 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ + K KF L+ L + M L Y L + + ++ R + A+ M
Sbjct: 83 FNKLLSAIAKMNKFDLVISLGERMQNLRISY-DLYSYNILINCFCRRSQLPLALAVLGKM 141
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-----LEFKDCIPLSSQIFNILIHGWCK 278
K G E D LS L++ G + A + +E++ ++ FN LIHG
Sbjct: 142 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP----NTVTFNTLIHGLFL 197
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
K +A + M +G PD+ +Y + C+ D LK+M++ + V+
Sbjct: 198 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 257
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT ++ AL K +N+AL ++ +M + P+ Y+SLI L GR DA+ + DM
Sbjct: 258 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 317
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++ + PNV+T++ +I + + A KL +M + PD TY+ L+ C R+
Sbjct: 318 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 377
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
+ M D + TY +L++G ++ ++E F EM +G+V TY L
Sbjct: 378 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 437
Query: 519 EKL 521
+ L
Sbjct: 438 QGL 440
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 140/301 (46%), Gaps = 2/301 (0%)
Query: 248 VEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
++ A +F E PL S + FN L+ K K D + M S D+ SY
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I +CR L +M + G +P ++T + +++ K+I+EA+ + ++M +
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
P+T +++LI L + +A + + M +G P++ TY T+++ C R + + AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
LL+KME+ + D Y ++ C K + L T M + + TY SL+R L
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAKEQKT 545
G+ A +MI + I P T+ L + K+ +L A++ ++++ + +
Sbjct: 301 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 360
Query: 546 F 546
F
Sbjct: 361 F 361
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 163/355 (45%), Gaps = 33/355 (9%)
Query: 77 RLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRR 136
R ++ SR+ S ++ +V S ++ + K+VEA K L ++ ++R
Sbjct: 305 RWSDASRLLSDMIERKINPNVVTFSALID-AFVKEGKLVEAEK---------LYDEMIKR 354
Query: 137 FSNDLTPAFGFFTWAKTQTGY-MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
+ P FT++ G+ MH D L ++K M+EL+ D N
Sbjct: 355 ---SIDP--DIFTYSSLINGFCMH---------DRLDEAKH---MFELMISKDCFPN--- 394
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ T +T+++ + R ++ +E FR M + G+ +T + L+ L + + A K+F
Sbjct: 395 -VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ D +P ++IL+ G CK K++ A + + + PD+ +Y IE C+
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
D + KG KP+VI YT ++ + EA ++ +MK D LP++ Y
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 573
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
++LI + G + E+ ++M+ G V + T + +I+ E++ L++L
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+DDA EM Q P +V + + + F V + MQ + +Y
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + Q+ AL V KM PD SSL+ R+ +A + + M
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
PN +T+NT+I ++ A+ L+ +M C+PD TY ++ C++ + +
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 239
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M K + D Y +++ L + A + F EM +KGI P TY L
Sbjct: 240 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 296
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 84/174 (48%)
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++++A+ ++ +M LP ++ L+ ++K + + E M+ + ++ +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I+ C RS+ AL +L KM + +PD T + LL C KR+ L+ MF
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 179
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ + T+ +L+ GL K A + + M+++G P TY + L K+
Sbjct: 180 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 233
>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
mitochondrial [Vitis vinifera]
gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
Length = 519
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 109/406 (26%), Positives = 199/406 (49%), Gaps = 11/406 (2%)
Query: 128 SLVEQTLRRFSNDLTPAFGFFTWAKT-----QTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
SL T RF + L F K + GY+ YN +++L + +
Sbjct: 76 SLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALG 135
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
+V+ M E + T + ++ L R GR+D AVE +R M + G D +A L+ L
Sbjct: 136 VVQTMVE-KGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGL 194
Query: 243 VKGNSVEHAYKVFL-EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
V+ AY++ + + I S I+N LI+G+C+ +D AQ + M + G PD+
Sbjct: 195 CHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDL 254
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA-LKVYE 360
V+Y + + C E + ++ +K+M+ G +P V +Y ++ L KA ++++A + +
Sbjct: 255 VTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVN 314
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
KM++ L D Y+++I L A K A ++FE+M +G+ P+V+T+ +I +
Sbjct: 315 KMEAKG-LCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREG 373
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
A KLL +M PD Y ++ C+ +M + + + M ++ ++ D +Y
Sbjct: 374 SSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYN 433
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL--EKK 524
+L+ GL + ++ A +E+M + G P T+K++ L EKK
Sbjct: 434 ALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKK 479
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 164/369 (44%), Gaps = 50/369 (13%)
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSV----LMDTLVKGNSVEHAYKVFLEFKDCIP 263
V+ G D A++ F M K + R S+ + LV+ + + A + + IP
Sbjct: 20 VKAGLIDQALKTFDEMTK----SNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRM---IP 72
Query: 264 ----LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
L+S ++ I G CK + +K +++M + G+ PD+ +Y ++ C E
Sbjct: 73 QGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDV 132
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD--------- 370
++ M EKG +P ++TYTIV++ L +A + + A++++ M PD
Sbjct: 133 ALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVL 192
Query: 371 --------------------------TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
S Y+SLI +AG + A I M++ G P
Sbjct: 193 GLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEP 252
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+++TYN +++ C E A L++KME +PD +Y LLK C+ R+ ++
Sbjct: 253 DLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMM 312
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ + D +Y ++++ L + + A FEEM KGI P T+ +L + ++
Sbjct: 313 VNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLRE 372
Query: 525 RLGNAKERI 533
N +++
Sbjct: 373 GSSNIAKKL 381
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 106/218 (48%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N L+ G CK ++D A M + DVVSY I+ C ++ +EM
Sbjct: 292 YNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMG 351
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
KG P V+T+TI++ A + N A K+ ++M LPD Y++++ L K G++
Sbjct: 352 GKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMG 411
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
A+ +F DM + G+ P+V++YN +I+ C S A+ L + M PD T+ ++
Sbjct: 412 MAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLII 471
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+K++ V + M + ++D +LV +
Sbjct: 472 GGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAI 509
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%)
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
++Y I Y + + T EM + C+ I Y + L + + + A + Y++
Sbjct: 10 LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M ++ YS I L K ++ EDM + G VP++ YN ++ C ++
Sbjct: 70 MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
+ AL ++Q M E +PD TY ++ CR R + +M + S D +
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189
Query: 482 LVRGLIESGKLELA 495
LV GL GK++LA
Sbjct: 190 LVLGLCHDGKVDLA 203
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 207/435 (47%), Gaps = 19/435 (4%)
Query: 122 GVSVSNSLVEQTLRRFSND-LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLM 180
G +++++++ Q L S D ++ FF W ++ + H+ + TM+ L K K+F
Sbjct: 60 GSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTA 119
Query: 181 WELVKEM---DELNNGYVSLATM---------STIMRRLV----RGGRYDDAVEAFRGMK 224
L++ + D L++ V A + S I+ LV DA++ F M+
Sbjct: 120 QNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMR 179
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVD 283
+G + A +VL+++L K +KV+ + + + + IFN+LIH CK+ V+
Sbjct: 180 VHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVE 239
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A++ + EM + PD+ +Y I YC++ + M+ G P ++TY ++
Sbjct: 240 KAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLI 299
Query: 344 HALGK-AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ + + EAL++ E M+ + P Y+S++ L + G++KDAN + +M ++ V
Sbjct: 300 YGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKV 359
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+ +T NT+I++ C + +A+K+ +KM E KPD T+ L+ C+ +
Sbjct: 360 EPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 419
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L M S TY+ LV + E +E+ KG+ S Y+ L +L
Sbjct: 420 FLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLC 479
Query: 523 KKRLGNAKERINKLL 537
K + ERI L+
Sbjct: 480 KIDKIESAERIFTLM 494
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 109/237 (45%), Gaps = 5/237 (2%)
Query: 269 FNILIHGWCKTRKVDDAQKAMK---EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+N LI+G+C R+V+D ++A++ M +G P VV+Y + C E + + L
Sbjct: 295 YNSLIYGFC--REVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLN 352
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM E+ +P +T +++A K + A+KV +KM PD + +LI K
Sbjct: 353 EMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLH 412
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
V A E +M G P+ TY+ ++ S + +E ++L ++ D Y
Sbjct: 413 EVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYR 472
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
L++ C+ +++ + T M + D+ Y SL ++GK A +EM
Sbjct: 473 ALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 529
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 111/233 (47%), Gaps = 1/233 (0%)
Query: 184 VKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
++E+ E+ + + T ++I+R+L G+ DA M + VE D + L++
Sbjct: 315 LREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYC 374
Query: 244 KGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K + A KV + + Q F LIHG+CK +VD A++ + EM GFSP
Sbjct: 375 KIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYS 434
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+Y+ ++ Y + + V E+ KG + Y ++ L K +I A +++ M
Sbjct: 435 TYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLM 494
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+ D+ Y+SL + KAG+ A+++ ++M K+ ++ + Y +S
Sbjct: 495 QGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSAS 547
>gi|147789025|emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
Length = 515
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 222/454 (48%), Gaps = 12/454 (2%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVS---VSNSLVEQTLRRF----SNDLTPAFG 146
++++D++++I++ + PD + + V +SN+ VE L R SN AF
Sbjct: 40 KSEIDRVTRIIN-DHPFPDHPLHSTLIQHVPKHLLSNTFVENVLGRLFAAHSNGFK-AFE 97
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
FF ++ + + + + + + +L + + F WEL++E+ + + ++L +MS ++ R
Sbjct: 98 FFKFSLQHSEFCPSSDAFEKTLHILTRMRYFDKAWELMEEIQQTHPSLLTLKSMSIMLSR 157
Query: 207 LVRGGRYDDAVEAFRGMKK---YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
+ + Y+D +EAF M+K +G E +VL+ ++ A VF +
Sbjct: 158 IAKFQSYEDTLEAFGRMEKNVFFGREFGANEFNVLLRAFCTQRQMKEARSVFHKMHSRFS 217
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+++ NIL+ G+ ++ V + EM ++GF P+ V+Y I+ YC++ F
Sbjct: 218 PNTKTMNILLLGFKESGDVTAVELFYHEMIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRL 277
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
L+EM++ C P++ T T ++H G A+ I+ A +++ ++ + PD Y++ + L +
Sbjct: 278 LEEMEKANCPPTLETITTLIHGAGVAQNISRARELFNEISIRNLQPDIGVYNAFMSSLIR 337
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
+ V+ A + ++M+++G+ + +TY+TM + E +L KM P T
Sbjct: 338 SREVQSALMLMDEMEEEGIGHDSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRT 397
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
L+K C+ +++ + L ++ LV GL GK++ A ++ +
Sbjct: 398 IVMLMKWFCQNQQLDLSLDLWGYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTL 457
Query: 504 SKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
+G ++MLE L + G ++++++
Sbjct: 458 ERGRPMSEGVFRMLERYLVEAGEGEMLWKLDQMI 491
>gi|356575428|ref|XP_003555843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g59040-like [Glycine max]
Length = 562
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 206/440 (46%), Gaps = 15/440 (3%)
Query: 114 VVEALKGCGVSVSNSLVEQTLRRFSN--DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL 171
V+ A K ++ LV TL RF W +TQ + + ++
Sbjct: 87 VLSAEKINNQNIPKDLVVGTLIRFKQLKKWNLVVEILEWLRTQNWWDFGKMDFFMLITAY 146
Query: 172 GKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
GK F +++ M++ NGY ++ + + +M +GGRY++A FR M+K+G E
Sbjct: 147 GKLGDFNGAEKVLGLMNK--NGYAPNVVSQTALMEAYGKGGRYNNAEAIFRRMQKWGPEP 204
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPL--SSQIFNILIHGWCKTRKVDDAQ 286
+++ T V+GN A ++F L + PL ++FN++I+ K + A+
Sbjct: 205 SAFTYQIILKTFVQGNKFREAEELFDNLLNDENSPLKPDQKMFNMMIYMHKKAGSYEKAR 264
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
K +M + G V+Y + E ++++V + +MQ +P V++Y +++ A
Sbjct: 265 KTFAQMAELGIQQTTVTYNSLMSF---ETNYKEVSNIYDQMQRADLRPDVVSYALLVSAY 321
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
GKA++ EAL V+E+M P Y+ L+ S +G V+ A +F+ M++ P++
Sbjct: 322 GKARREEEALAVFEEMLDAGIRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDL 381
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+Y TM+S+ + E A K +++ +D +P+ TY L+K + ++++
Sbjct: 382 CSYTTMLSAYINADDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKINDLEMVMKKYEE 441
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
M + + +++ +SG + A +F+EM S GI P +L L +
Sbjct: 442 MLMRGIKANQTILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVL---LSLAKT 498
Query: 527 GNAKERINKLLAHAKEQKTF 546
+E N+L+ H E +
Sbjct: 499 DEEREEANELVVHFSENSSL 518
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 104/237 (43%), Gaps = 1/237 (0%)
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNI 271
Y + + M++ + D + ++L+ K E A VF E D I + + +NI
Sbjct: 292 YKEVSNIYDQMQRADLRPDVVSYALLVSAYGKARREEEALAVFEEMLDAGIRPTRKAYNI 351
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+ + + V+ AQ K M + + PD+ SYT + Y D + K + + G
Sbjct: 352 LLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTTMLSAYINADDMEGAEKFFKRLIQDG 411
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+P+V+TY ++ K + +K YE+M + + ++++ K+G A
Sbjct: 412 FEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLMRGIKANQTILTTIMDAYGKSGDFDSAV 471
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
F++M+ G+ P+ N ++S A E E A +L+ E+ P L+
Sbjct: 472 HWFKEMESNGIPPDQKAKNVLLSLAKTDEEREEANELVVHFSENSSLPKVNGIVKLV 528
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/255 (22%), Positives = 112/255 (43%), Gaps = 5/255 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ G T YN+++ K+ +++ ++ D L VS A + + + R
Sbjct: 271 AELGIQQTTVTYNSLMSFETNYKEVSNIYDQMQRAD-LRPDVVSYALLVSAYGK---ARR 326
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNI 271
++A+ F M G+ +A ++L+D VE A VF + D +
Sbjct: 327 EEEALAVFEEMLDAGIRPTRKAYNILLDAFSISGMVEQAQTVFKSMRRDRYFPDLCSYTT 386
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++ + ++ A+K K + Q GF P+VV+Y I+ Y + D V +EM +G
Sbjct: 387 MLSAYINADDMEGAEKFFKRLIQDGFEPNVVTYGTLIKGYAKINDLEMVMKKYEEMLMRG 446
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
K + T +M A GK+ + A+ +++M+S+ PD + L+ + ++AN
Sbjct: 447 IKANQTILTTIMDAYGKSGDFDSAVHWFKEMESNGIPPDQKAKNVLLSLAKTDEEREEAN 506
Query: 392 EIFEDMKKQGVVPNV 406
E+ + +P V
Sbjct: 507 ELVVHFSENSSLPKV 521
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 91/362 (25%), Positives = 180/362 (49%), Gaps = 4/362 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ L +++ EL + M ++ G V L T ++ R +A
Sbjct: 253 YNVIIGGLCRARLLDEAIELKRSM--VDKGLVPDLYTYDILINGFCMEKRSREAKLMLLE 310
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
M G++ + + L+D ++ +E A+++ E C I + I+N L++G CK K
Sbjct: 311 MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGK 370
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++ A + M+EM ++G PD +Y+ IE +CR ++ + + L EM+++ P+V+TY++
Sbjct: 371 MEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSV 430
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ L + + + +M + P+ Y++L+ +K GRV+++ I E M++QG
Sbjct: 431 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQG 490
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
++P+V YN++I C E A L +M E +P+ TY + + M++ +
Sbjct: 491 ILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIAD 550
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M V + G Y +L+ G + G + A S F ++S+ ++ TY +L L
Sbjct: 551 RYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGL 610
Query: 522 EK 523
+
Sbjct: 611 SR 612
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 174/369 (47%), Gaps = 8/369 (2%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
+ Y+ +++ + + +EL+ EM + L T S I+ L R G R
Sbjct: 391 QTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL-TYSVIINGLCRCGNLQGTNAILR 449
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTR 280
M G++ + + LM K VE + + ++ L +N LI G+CK +
Sbjct: 450 EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAK 509
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++++A+ + EM ++ P+ +Y FI+ Y + + D EM G P+V YT
Sbjct: 510 RMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYT 569
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K + EA V+ + S L D YS LI LS+ G++ +A IF +++++
Sbjct: 570 ALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 629
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G++PN TYN++IS +C + + A +LL++M PD TY L+ C+ ++
Sbjct: 630 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERA 689
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML--- 517
L + ++ + TYA++V G +S A EEM+ +G+ P Y ++
Sbjct: 690 KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 749
Query: 518 ---EEKLEK 523
EEK EK
Sbjct: 750 CCKEEKFEK 758
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 166/343 (48%), Gaps = 9/343 (2%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
NG + +M + G +AV F G K + + + L+ L+KGN VE
Sbjct: 140 NGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELF 199
Query: 252 YKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+KVF + +P + +I CK V DA++ + EM ++G SP++V+Y I
Sbjct: 200 WKVFDGMCAHKVLP-DVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIG 258
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
CR + + + + M +KG P + TY I+++ K+ EA + +M P
Sbjct: 259 GLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKP 318
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ Y++LI + G ++ A I ++M G+ N++ +NT+++ C + E AL+++
Sbjct: 319 EPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIM 378
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
Q+M E +PD +TY+ L++ CR + M LL M K ++ TY+ ++ GL
Sbjct: 379 QEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRC 438
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKML------EEKLEKKRL 526
G L+ + EM+ G+ P Y L E ++E+ R+
Sbjct: 439 GNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRM 481
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 12/314 (3%)
Query: 212 RYDDAVEAFR---GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQ 267
R D +AFR M G+E + + L++ + K +E A ++ E + + SQ
Sbjct: 332 RQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQ 391
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+++LI G C+ + + A + + EM ++ +P V++Y+ I CR + + + L+EM
Sbjct: 392 TYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREM 451
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
G KP+ + YT +M A K ++ E+ + E+M+ LPD Y+SLI KA R+
Sbjct: 452 VMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRM 511
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
++A +M ++ + PN TY I E E A + +M P+ Y L
Sbjct: 512 EEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTAL 571
Query: 448 LKMCCRKKRM----KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
++ C++ + V F+L+ DV TY+ L+ GL +GK+ A F E+
Sbjct: 572 IEGHCKEGNVTEAFSVFRFILSRRVLQDVQ----TYSVLIHGLSRNGKMHEAFGIFSELQ 627
Query: 504 SKGIVPYHSTYKML 517
KG++P TY L
Sbjct: 628 EKGLLPNAFTYNSL 641
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 162/366 (44%), Gaps = 36/366 (9%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FK 259
+T+M + GR +++ M++ G+ D + L+ K +E A +E +
Sbjct: 464 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 523
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ ++ + I G+ K +++ A + EM G P+V YT IE +C+E + +
Sbjct: 524 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 583
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ + + V TY++++H L + +++EA ++ +++ LP+ Y+SLI
Sbjct: 584 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 643
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
K G V A+++ E+M +G+ P+++TYN +I C E E A L +E P
Sbjct: 644 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 703
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY-------------------- 479
+C TYA ++ C+ K LL M V DA Y
Sbjct: 704 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 763
Query: 480 --------------ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY-KMLEEKLEKK 524
+L+ G +SGKL+ A EEMI K +P H TY +++ +
Sbjct: 764 QEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAG 823
Query: 525 RLGNAK 530
+G AK
Sbjct: 824 MMGEAK 829
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 159/329 (48%), Gaps = 6/329 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T S ++ L R G+ +A F +++ G+ + + L+ K +V+ A ++ E
Sbjct: 602 TYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 661
Query: 259 KDCI-PLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
CI ++ I +NILI G CK +++ A+ ++ +G +P+ V+Y ++ YC+ K
Sbjct: 662 --CIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ L+EM +G P Y ++++ K ++ +AL ++++M SF +
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSF-N 778
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI K+G++++AN + E+M ++ +PN +TY ++I C A +L +M+E
Sbjct: 779 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQER 838
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
P +TY LL M ++ L M + D TY ++ G + A
Sbjct: 839 NVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEA 898
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
C +E++ KG+ + Y L + L KK
Sbjct: 899 CKLKDEILVKGMPMSVAAYDALIQALCKK 927
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/455 (21%), Positives = 198/455 (43%), Gaps = 53/455 (11%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGV----SVSNSLVEQTLRRFSNDLTPAFGFFTWAK 152
+D SK + + + D+ + CGV + +L+E + ++T AF F +
Sbjct: 537 IDGYSK--AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE--GNVTEAFSVFRFIL 592
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE---LNNGYVSLATMSTIMRRLVR 209
++ + + Y+ ++ L ++ K + + E+ E L N + T ++++ +
Sbjct: 593 SRR-VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF----TYNSLISGSCK 647
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCI- 262
G D A + M G+ D ++L+D L K +E A +F + + +C+
Sbjct: 648 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 707
Query: 263 -----------------------------PLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
P + I+N++++ CK K + A +EM
Sbjct: 708 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML 767
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
++GF+ VS+ IE YC+ ++ + L+EM EK P+ +TYT ++ KA +
Sbjct: 768 EKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMG 826
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EA +++ +M+ + +P Y+SL+ G + + + +FE+M +G+ P+ +TY MI
Sbjct: 827 EAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMI 886
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ C A KL ++ Y L++ C+K+ + LL + ++
Sbjct: 887 DAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFR 946
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ T + + RG +G ++ A M+ G V
Sbjct: 947 LGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWV 981
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/272 (18%), Positives = 111/272 (40%), Gaps = 40/272 (14%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YN +++ K +KF +L +EM L G+ S + +T++ + G+ +A
Sbjct: 742 IYNVILNFCCKEEKFEKALDLFQEM--LEKGFASTVSFNTLIEGYCKSGKLQEANHLLEE 799
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M + + + L+D K + A +++LE ++ +P +++ + L+HG+
Sbjct: 800 MIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMP-TAKTYTSLLHGYHNIG 858
Query: 281 KVDDAQKAMKEMFQQGFSPD-----------------------------------VVSYT 305
+ + +EM +G PD V +Y
Sbjct: 859 NMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYD 918
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I+ C++++F +V L E+ E G + + T +++ A ++EA +V M
Sbjct: 919 ALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKF 978
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
+ +T+ L+ +D++ + + M
Sbjct: 979 GWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
>gi|356517946|ref|XP_003527646.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g06000-like [Glycine max]
Length = 511
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 95/361 (26%), Positives = 173/361 (47%), Gaps = 5/361 (1%)
Query: 182 ELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
EL+ ++ + NN V+ + + L+R + DAV FR + + + T +++L+
Sbjct: 128 ELLADV-QCNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILIRG 186
Query: 242 LVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG-FS 298
L + ++ A+K+ + + C+P +N LIHG C +VD A+ ++E+ G F+
Sbjct: 187 LCRVGEIDEAFKLLKDLRSFGCLP-DVITYNTLIHGLCLINEVDRARSLLREVCLNGEFA 245
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PDVVSYT I YC+ + + EM G P+ T+ ++ GK + AL +
Sbjct: 246 PDVVSYTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALAL 305
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
Y KM CLPD + ++SLI + +V A +++ M ++ + ++ TY+ ++S C
Sbjct: 306 YSKMLVQGCLPDVATFTSLINGHFRVRQVHQAMDMWHKMNEKNIGASLYTYSVLVSGLCN 365
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ A +L+ + E P Y P++ C+ + N ++ M N D T
Sbjct: 366 NNRLHKARDILRLLNESDIVPQPFIYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLT 425
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
+ L+ G G++ A FF++M++ G P T L L K + R+ ++LA
Sbjct: 426 FTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITVNNLRSCLLKAGMPGEAARVKEVLA 485
Query: 539 H 539
Sbjct: 486 Q 486
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/254 (20%), Positives = 118/254 (46%), Gaps = 9/254 (3%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+++L+ C++ A+ M G PD + Y + L ++Q
Sbjct: 75 YSLLLRSLCRSNLHHTAKVVYDWMRCDGQIPDNRLLGFLVSSYAIVGRLDVSRELLADVQ 134
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+ + Y + + L + ++ +A+ ++ ++ P T + LI L + G +
Sbjct: 135 CNNVGVNAVVYNDLFNVLIRQNKVVDAVVLFRELIRLRYKPVTYTVNILIRGLCRVGEID 194
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC-----KPDCET 443
+A ++ +D++ G +P+V+TYNT+I C +E + A LL+ ++C PD +
Sbjct: 195 EAFKLLKDLRSFGCLPDVITYNTLIHGLCLINEVDRARSLLR----EVCLNGEFAPDVVS 250
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y ++ C+ ++M+ + L M + + + T+ +L+ G + G + A + + +M+
Sbjct: 251 YTMIISGYCKLRKMEEGSLLFDEMINSGTAPNTFTFNALIDGFGKLGDMASALALYSKML 310
Query: 504 SKGIVPYHSTYKML 517
+G +P +T+ L
Sbjct: 311 VQGCLPDVATFTSL 324
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/219 (22%), Positives = 92/219 (42%), Gaps = 3/219 (1%)
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWC 277
F M G +T + L+D K + A ++ + + C+P F LI+G
Sbjct: 271 FDEMINSGTAPNTFTFNALIDGFGKLGDMASALALYSKMLVQGCLP-DVATFTSLINGHF 329
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ R+V A +M ++ + +Y+ + C K D L+ + E P
Sbjct: 330 RVRQVHQAMDMWHKMNEKNIGASLYTYSVLVSGLCNNNRLHKARDILRLLNESDIVPQPF 389
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y V+ K+ ++EA K+ +M+ + C PD ++ LI GR+ +A F+ M
Sbjct: 390 IYNPVIDGYCKSGNVDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRMPEAIGFFDKM 449
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
G P+ +T N + S A ++ + + ++L
Sbjct: 450 LAVGCAPDEITVNNLRSCLLKAGMPGEAARVKEVLAQNL 488
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 92/212 (43%), Gaps = 6/212 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N ++D GK L +M L G + +AT ++++ R + A++ +
Sbjct: 286 FNALIDGFGKLGDMASALALYSKM--LVQGCLPDVATFTSLINGHFRVRQVHQAMDMWHK 343
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M + + SVL+ L N + A + L D +P I+N +I G+CK+
Sbjct: 344 MNEKNIGASLYTYSVLVSGLCNNNRLHKARDILRLLNESDIVP-QPFIYNPVIDGYCKSG 402
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
VD+A K + EM PD +++T I +C + + +M GC P IT
Sbjct: 403 NVDEANKIVAEMEVNRCKPDKLTFTILIIGHCMKGRMPEAIGFFDKMLAVGCAPDEITVN 462
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ L KA EA +V E + + L TS
Sbjct: 463 NLRSCLLKAGMPGEAARVKEVLAQNLTLGTTS 494
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 99/352 (28%), Positives = 176/352 (50%), Gaps = 7/352 (1%)
Query: 170 VLGKSKKFCLMWELVKEMDE-LNNGYVSLATMSTIM-RRLVRGGRYDDAVEAFRGMKKYG 227
+LG SK M E K DE L++G + + T++ + G +A+ FR + G
Sbjct: 550 ILGYSKT-GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALG 608
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI--LIHGWCKTRKVDDA 285
V D + S + L+K V+ A KVF E K+ L +F LI G+CK +V+ A
Sbjct: 609 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE-KGLVPDVFTYSSLISGFCKQGEVEKA 667
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ EM +G +P++ Y ++ C+ D ++ M EKG +P +TY+ ++
Sbjct: 668 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 727
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K++ + EA ++ +M S P + Y++L+ K G ++ A +F +M ++G
Sbjct: 728 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-T 786
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
L++NT+I C + + A +L Q+M PD TY ++ C+ +M+ N L
Sbjct: 787 TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFK 846
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M + ++ +D TY SL+ G + G+ + FE+M++KG+ P TY ++
Sbjct: 847 EMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLV 898
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 151/312 (48%), Gaps = 1/312 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + I L R R ++A F M+K G++ D A S L+D ++ ++ ++
Sbjct: 300 TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM 359
Query: 259 KDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C IP++ +N+LIHG CK K++ A + +K M G P+ ++ IE YCRE +
Sbjct: 360 VSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNM 419
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + L EM+++ PS ++Y +++ L K ++ A K+ EKM P+ YS L
Sbjct: 420 GRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSIL 479
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + GR+++A + + M GV P++ YN +IS + E A L +++
Sbjct: 480 IMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 539
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KPD T+ + + +M M + + + Y L+ G ++G L A S
Sbjct: 540 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 599
Query: 498 FFEEMISKGIVP 509
F + + G++P
Sbjct: 600 IFRRLHALGVLP 611
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 169/376 (44%), Gaps = 2/376 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y M++ L K L +L+++M + ++ S ++ GR ++A GM
Sbjct: 441 YGAMINGLCHCKDLSLANKLLEKM-TFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGM 499
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKV 282
GV D + ++ L K +E A LE + + + F I G+ KT K+
Sbjct: 500 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 559
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A K EM G P+ YT I + + + + + + G P V T +
Sbjct: 560 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAF 619
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+H L K ++ EALKV+ ++K +PD YSSLI K G V+ A E+ ++M +G+
Sbjct: 620 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 679
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN+ YN ++ C + + A KL M E +PD TY+ ++ C+ + +
Sbjct: 680 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 739
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L M V + Y +LV G + G +E A + F EM+ KG S +++ +
Sbjct: 740 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCK 799
Query: 523 KKRLGNAKERINKLLA 538
++ A + +++A
Sbjct: 800 SCKIQEASQLFQEMIA 815
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 105/402 (26%), Positives = 182/402 (45%), Gaps = 23/402 (5%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM-----------DEL----- 190
FF W+++Q G + ++ + L S+ F L ++ +M D +
Sbjct: 92 FFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFR 151
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
N G S ++ R G D+A F K + + L+ L+K +E
Sbjct: 152 NYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMEL 211
Query: 251 AYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+KV+ D + + L+ CKT + A++ + EM ++G +P+ Y+ IE
Sbjct: 212 FWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIE 271
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
C+ D + + + M EKG P+ TYTI+ L +AK++NEA +E+M+ P
Sbjct: 272 GMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKP 331
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D + S+LI + G + + I + M G+ N++TYN +I C + E A ++L
Sbjct: 332 DYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEIL 391
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ M CKP+ T+ L++ CR+ M LL M K ++ A +Y +++ GL
Sbjct: 392 KGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC 451
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKML------EEKLEKKR 525
L LA E+M G+ P Y +L E ++E+ R
Sbjct: 452 KDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEAR 493
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 156/315 (49%), Gaps = 4/315 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+ ++ L + G A + F GM + G+E D+ S ++D K +V A+ +F E
Sbjct: 687 NALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPS 746
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K P S ++N L+HG CK ++ A +EM Q+GF+ +S+ I+ YC+ +
Sbjct: 747 KGVQP-HSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFAT-TLSFNTLIDGYCKSCKIQ 804
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ +EM K P +TYT V+ KA ++ EA ++++M+ + + DT Y+SL+
Sbjct: 805 EASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLM 864
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ +K G+ + +FE M +GV P+ +TY +I + C A KL ++
Sbjct: 865 YGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGML 924
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
+ L+ C+++ + + LL M + + +LVR E+GK++ A
Sbjct: 925 TKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRV 984
Query: 499 FEEMISKGIVPYHST 513
FE + S G+VP +T
Sbjct: 985 FEGVKSLGLVPDTTT 999
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 93/432 (21%), Positives = 197/432 (45%), Gaps = 49/432 (11%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE- 182
++N ++ Q +R + + W + G +P +++ ++D K+ ++ E
Sbjct: 123 GLANGVLTQMIRTPYSSSSILDSVLFWFRNYGG--SSPVVFDILID---SYKRMGMLDEA 177
Query: 183 ----LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVL 238
V + D + +SL +++++ L++ G + + + GM + D + L
Sbjct: 178 ANVFFVAKNDSI---LISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYL 234
Query: 239 MDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
+ L K + A +V +E + + + I++++I G C+ +D+A + + M ++G
Sbjct: 235 VGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGL 294
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP----------------------- 334
P+ +YT CR K + T +EMQ+ G KP
Sbjct: 295 VPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLR 354
Query: 335 ------------SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
++ITY +++H L K ++ +A ++ + M + C P++ + LI
Sbjct: 355 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYC 414
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
+ + A E+ ++M+K+ +VP+ ++Y MI+ C + A KLL+KM KP+
Sbjct: 415 REHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVV 474
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y+ L+ + R++ LL M + V+ D Y +++ L ++GK+E A ++ E+
Sbjct: 475 VYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEI 534
Query: 503 ISKGIVPYHSTY 514
+G+ P T+
Sbjct: 535 QGRGLKPDAVTF 546
>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 680
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/374 (25%), Positives = 173/374 (46%), Gaps = 11/374 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN--NGYVSLATMSTIMRRLVRGG 211
Q G + Y +++ + KS F E + +DE+ ++ T + I+ + R G
Sbjct: 180 QRGCQPSVVTYTVLLEAVCKSSGF---GEAMNVLDEMRAKGCTPNIVTYNVIINGMCREG 236
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIF 269
R DDA E + YG + D + + ++ L + +F E D C+P + F
Sbjct: 237 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVP-NEVTF 295
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
++L+ +C+ V+ A + +++M Q G +P+ I C++ D L M
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 355
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
GC P I+YT V+ L +A + A ++ +M +C P+ +++ I IL + G ++
Sbjct: 356 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 415
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A ++ E M + G ++TYN ++ C + ++AL+L + C+P+ TY LL
Sbjct: 416 AIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITYTTLLT 472
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C +R+ LL M + D ++A T+ LV + G +E A +M+ G P
Sbjct: 473 GLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTP 532
Query: 510 YHSTYKMLEEKLEK 523
T+ L + + K
Sbjct: 533 NLITFNTLLDGITK 546
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 156/318 (49%), Gaps = 7/318 (2%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M + G + +VL++ + K + A V E K C P + +N++I+G C+
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTP-NIVTYNVIINGMCREG 236
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+VDDA++ + + GF PD+VSYT ++ C + + V EM +K C P+ +T+
Sbjct: 237 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 296
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+++ + + A++V ++M C P+T+ + +I + K GRV DA + +M
Sbjct: 297 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 356
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+ ++Y T++ C E+A +LL +M C P+ T+ + + C+K ++
Sbjct: 357 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 416
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L+ M + S+ TY +LV G G+++ A F + + P TY L
Sbjct: 417 IKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTG 473
Query: 521 L-EKKRLGNAKERINKLL 537
L +RL A E + +++
Sbjct: 474 LCHAERLDAAAELLAEMI 491
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 157/326 (48%), Gaps = 6/326 (1%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KD 260
++ + + GR DDA + M YG DT + + ++ L + EHA ++ E K+
Sbjct: 333 VINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 392
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
C P + FN I C+ ++ A K ++ M + G S +V+Y + +C + +V
Sbjct: 393 CPP-NEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG---RV 448
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
D L+ C+P+ ITYT ++ L A++++ A ++ +M DC + ++ L+
Sbjct: 449 DSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSF 508
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ G V++A E+ M + G PN++T+NT++ E AL+LL + D
Sbjct: 509 FCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLD 568
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY+ ++ + R+ R + +L + + G Y ++ L + + + A FF
Sbjct: 569 TITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFA 628
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRL 526
M+S G +P STY +L E L + L
Sbjct: 629 YMVSNGCMPNESTYIILIEGLAHEGL 654
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 148/311 (47%), Gaps = 7/311 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ L ++ ++ EL+ EM N + T +T + L + G + A++ M
Sbjct: 365 YTTVLRGLCRAGRWEHAKELLPEMVR-KNCPPNEVTFNTFICILCQKGLIEQAIKLIELM 423
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPL--SSQIFNILIHGWCKTRK 281
+YG V + LV G V+ LE + +P ++ + L+ G C +
Sbjct: 424 PEYGCSVGI----VTYNALVHGFCVQGRVDSALELFNNLPCEPNTITYTTLLTGLCHAER 479
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A + + EM Q+ + V++ + +C++ + + + +M E GC P++IT+
Sbjct: 480 LDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNT 539
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + K EAL++ + S DT YSS++ +LS+ R ++A ++ ++ G
Sbjct: 540 LLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMG 599
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P V YN ++ + C R E + A+ M + C P+ TY L++ + +K
Sbjct: 600 MRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEAR 659
Query: 462 FLLTHMFKNDV 472
++L+ ++ V
Sbjct: 660 YVLSELYAKGV 670
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/277 (22%), Positives = 122/277 (44%), Gaps = 42/277 (15%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT + +L + +L++ M E V + T + ++ GR D A+E F +
Sbjct: 400 FNTFICILCQKGLIEQAIKLIELMPEYGCS-VGIVTYNALVHGFCVQGRVDSALELFNNL 458
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
E +T + L+ L ++ A ++ E KDC PL++ FN+L+ +C+
Sbjct: 459 P---CEPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDC-PLNAVTFNVLVSFFCQKGF 514
Query: 282 VDDAQKAMKEMFQQGFSP-----------------------------------DVVSYTC 306
V++A + + +M + G +P D ++Y+
Sbjct: 515 VEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSS 574
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
++ RE + L +Q+ G +P V Y ++ AL K + ++A+ + M S+
Sbjct: 575 VVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNG 634
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
C+P+ S Y LI L+ G +K+A + ++ +GV+
Sbjct: 635 CMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVL 671
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 156/308 (50%), Gaps = 10/308 (3%)
Query: 212 RYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
R D AV F + + + V +D + L+D L K A + + P +N
Sbjct: 149 RPDIAVRLFLSLHRSHRVAQDLPLFNSLLDALGKSRHASKAASLVRALERRFPPDVVTYN 208
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
L GWC+ + A +++M + G +P +Y ++ + R + + +M+++
Sbjct: 209 TLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKR 268
Query: 331 G-----CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
G CKP V++YT ++H LG A Q+++A K++++M + C P + Y++LI ++ K G
Sbjct: 269 GSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKG 328
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
V+DA +F+DM ++ +PNV+TY +I C + + A+KL+++M+ + C+P +TY
Sbjct: 329 NVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYN 388
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSM-DAGTYASLVRGLIESGKLE---LACSFFEE 501
L++ + M L M K + + + TY ++ + + E +A E
Sbjct: 389 VLIRYSFEEGEMDKALHLFERMSKGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVME 448
Query: 502 MISKGIVP 509
M+ +G +P
Sbjct: 449 MVERGYLP 456
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 137/283 (48%), Gaps = 14/283 (4%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N+++D LGKS+ LV+ ++ + T +T+ R A++ R
Sbjct: 172 LFNSLLDALGKSRHASKAASLVRALER--RFPPDVVTYNTLADGWCRVKDTSRALDLLRQ 229
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-------DCIPLSSQIFNILIHG 275
M + G+ +V++ + ++HA+ FL+ K +C P + +IHG
Sbjct: 230 MAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKP-DVVSYTTIIHG 288
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
++D A+K EM ++G P + +Y I+ C++ + +M K P+
Sbjct: 289 LGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPN 348
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+TYT+++ L +I+ A+K+ E+MK++ C P Y+ LI + G + A +FE
Sbjct: 349 VVTYTVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHLFE 408
Query: 396 DMKK-QGVVPNVLTYNTMISSACARSEEEN---ALKLLQKMEE 434
M K + +PN TYN +IS+ R E+ A +++ +M E
Sbjct: 409 RMSKGEECLPNQDTYNIVISAMFVRKRAEDMAIAARMVMEMVE 451
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 121/263 (46%), Gaps = 8/263 (3%)
Query: 262 IPLSSQIFNILIHGWCKT-RKVDDAQKAMKEMFQ-QGFSPDVVSYTCFIEHYCREKDFRK 319
+P + + F IL + + R+ D A + + + + D+ + ++ + + K
Sbjct: 129 LPFTPRTFPILFERFAASQRRPDIAVRLFLSLHRSHRVAQDLPLFNSLLDALGKSRHASK 188
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
++ + E+ P V+TY + + K + AL + +M P + Y+ ++
Sbjct: 189 AASLVRAL-ERRFPPDVVTYNTLADGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILK 247
Query: 380 ILSKAGRVKDANEIFEDMKKQG-----VVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+AG+++ A F MKK+G P+V++Y T+I + + A KL +M +
Sbjct: 248 GFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSK 307
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+ C P TY L+++ C+K ++ + M + D + TY L+RGL GK++
Sbjct: 308 EGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDR 367
Query: 495 ACSFFEEMISKGIVPYHSTYKML 517
A E M ++G P TY +L
Sbjct: 368 AMKLMERMKNEGCEPVVQTYNVL 390
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%), Gaps = 8/170 (4%)
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D ++SL+ L K+ A + ++++ P+V+TYNT+ C + AL LL
Sbjct: 169 DLPLFNSLLDALGKSRHASKAASLVRALERR-FPPDVVTYNTLADGWCRVKDTSRALDLL 227
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMK-VLNFLLTHMFKN----DVSMDAGTYASLVR 484
++M E P TY +LK R +++ NF L + + D +Y +++
Sbjct: 228 RQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIH 287
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
GL +G+L+ A F+EM +G P +TY L + + KK GN ++ +
Sbjct: 288 GLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKK--GNVEDAVT 335
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 173/364 (47%), Gaps = 13/364 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN M+D K+ +L+++M E N + T S ++ V+ G+ A E +R M
Sbjct: 118 YNCMIDGYCSYGKWSDAEQLLRDMIERNIDP-DVVTFSALINAFVKEGKVSGAEELYREM 176
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIP----LSSQIFNI------ 271
+ + T S ++D K + +E A +F + K C P L++ I
Sbjct: 177 LRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRH 236
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LIHG+C+ V+ AQ +EM G SPD+V+ + C K + K Q+
Sbjct: 237 LIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSK 296
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
T I+++ + K +++EA ++ + + D Y+ LI + K G A
Sbjct: 297 MDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAE 356
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+I+ +M +G++P+ +TYN+M+ C ++ E A +++ M + C PD T++ L+K
Sbjct: 357 DIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGY 416
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C+ R+ L + M + + D TY +L+ G + G L A FEEM+S G+ P
Sbjct: 417 CKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDT 476
Query: 512 STYK 515
T++
Sbjct: 477 ITFR 480
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 129/259 (49%), Gaps = 5/259 (1%)
Query: 205 RRLVRG----GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-K 259
R L+ G G + A + F+ M GV D + L+ L + +E A ++F F K
Sbjct: 235 RHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQK 294
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ L + NI+I+G CK KVD+A + G DVV+Y I + +E +F +
Sbjct: 295 SKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLR 354
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+D EM KG PS +TY ++ K ++ EA ++ + M S+ C PD +S+LI
Sbjct: 355 AEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIK 414
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
KAGRV D E+F +M ++G+V + +TYN +I C + A + ++M P
Sbjct: 415 GYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCP 474
Query: 440 DCETYAPLLKMCCRKKRMK 458
D T+ +L C K ++
Sbjct: 475 DTITFRSMLAGLCTKAELQ 493
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 150/285 (52%), Gaps = 15/285 (5%)
Query: 165 NTMVDVLGKSKK-----FC------LMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGR 212
NT++D ++K+ FC + +L +EM ++NG + T +T++ L G+
Sbjct: 224 NTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEM--ISNGVSPDIVTCNTLLAGLCENGK 281
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNI 271
+ A+E F+ +K ++ DT +++++ + KGN V+ A+ +F + + +NI
Sbjct: 282 LEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNI 341
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI + K A+ EM +G P V+Y ++ +C++ + + M +G
Sbjct: 342 LIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEG 401
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C P V+T++ ++ KA ++++ L+++ +M + DT Y++LI K G + A
Sbjct: 402 CSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQ 461
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+IFE+M GV P+ +T+ +M++ C ++E + L +L+ +++ +
Sbjct: 462 DIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQKSV 506
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 122/284 (42%), Gaps = 46/284 (16%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD------ 316
P + F L++G C+ +V A + M ++G PD V+Y + C+ D
Sbjct: 7 PANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALN 66
Query: 317 -FRKVDDT----------------------------LKEMQEKGCKPSVITYTIVMHALG 347
RK+D++ EM EKG P+V+TY ++
Sbjct: 67 MLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYC 126
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
+ ++A ++ M + PD +S+LI K G+V A E++ +M ++ + P +
Sbjct: 127 SYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTI 186
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF----- 462
TY++MI C S E+A + M C PD T L+ CCR KR + F
Sbjct: 187 TYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGN 246
Query: 463 ------LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
L M N VS D T +L+ GL E+GKLE A F+
Sbjct: 247 VNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFK 290
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 108/218 (49%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M + G +VV++T + CRE + + M E+G +P +TY +++ + K
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
AL + KM + YS+++ L K G A IF +M ++G+ PNVLTYN
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
MI C+ + +A +LL+ M E PD T++ L+ ++ ++ L M + +
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ TY+S++ G + +LE A F+ M+SKG P
Sbjct: 181 IFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSP 218
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 174/351 (49%), Gaps = 4/351 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L T T++ L + G D A+ + M+K +E D + ++D L +V A +F
Sbjct: 204 LFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFT 263
Query: 257 EFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E + I + +N LI C + DA + + +M ++ +P+VV+++ I+ + +E
Sbjct: 264 EMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEG 323
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ + EM ++ P + TY+ +++ +++EA ++E M S DC P+ Y+
Sbjct: 324 KLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 383
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI KA RV++ E+F +M ++G+V N +TYNT+I + + A K+ +KM D
Sbjct: 384 TLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSD 443
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
PD TY+ LL C+ +++ + ++ K+ + D TY ++ G+ ++GK+E
Sbjct: 444 GVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDG 503
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
F + KG+ P Y + +K L KE + L KE T
Sbjct: 504 WDLFCSLSLKGVKPNVIIYTTMISGFCRKGL---KEEADALFREMKEDGTL 551
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/366 (27%), Positives = 176/366 (48%), Gaps = 4/366 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFR 221
+Y T++D L K L EMD N G ++ T ++++R L GR+ DA
Sbjct: 241 IYTTIIDALCNYKNVNDALNLFTEMD--NKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 298
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTR 280
M + + + S L+D VK + A K++ E K I ++ LI+G+C
Sbjct: 299 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 358
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++D+A+ + M + P+VV+Y I+ +C+ K + + +EM ++G + +TY
Sbjct: 359 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 418
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L +A + A K+++KM SD PD YS L+ L K G+++ A +FE ++K
Sbjct: 419 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 478
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ P++ TYN MI C + E+ L + KP+ Y ++ CRK +
Sbjct: 479 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 538
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+ L M ++ ++GTY +L+R + G + +EM S G V ST M+
Sbjct: 539 DALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINM 598
Query: 521 LEKKRL 526
L RL
Sbjct: 599 LHDGRL 604
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 166/363 (45%), Gaps = 10/363 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ + K KF L+ L + M L Y L + + ++ R + A+ M
Sbjct: 67 FNKLLSAIAKMNKFDLVISLGERMQNLRISY-DLYSYNILINCFCRRSQLPLALAVLGKM 125
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-----LEFKDCIPLSSQIFNILIHGWCK 278
K G E D LS L++ G + A + +E++ ++ FN LIHG
Sbjct: 126 MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQP----NTVTFNTLIHGLFL 181
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
K +A + M +G PD+ +Y + C+ D LK+M++ + V+
Sbjct: 182 HNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 241
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT ++ AL K +N+AL ++ +M + P+ Y+SLI L GR DA+ + DM
Sbjct: 242 YTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMI 301
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++ + PNV+T++ +I + + A KL +M + PD TY+ L+ C R+
Sbjct: 302 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 361
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
+ M D + TY +L++G ++ ++E F EM +G+V TY L
Sbjct: 362 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 421
Query: 519 EKL 521
+ L
Sbjct: 422 QGL 424
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 140/301 (46%), Gaps = 2/301 (0%)
Query: 248 VEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
++ A +F E PL S + FN L+ K K D + M S D+ SY
Sbjct: 45 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 104
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I +CR L +M + G +P ++T + +++ K+I+EA+ + ++M +
Sbjct: 105 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 164
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
P+T +++LI L + +A + + M +G P++ TY T+++ C R + + AL
Sbjct: 165 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 224
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
LL+KME+ + D Y ++ C K + L T M + + TY SL+R L
Sbjct: 225 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 284
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAKEQKT 545
G+ A +MI + I P T+ L + K+ +L A++ ++++ + +
Sbjct: 285 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 344
Query: 546 F 546
F
Sbjct: 345 F 345
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 163/355 (45%), Gaps = 33/355 (9%)
Query: 77 RLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRR 136
R ++ SR+ S ++ +V S ++ + K+VEA K L ++ ++R
Sbjct: 289 RWSDASRLLSDMIERKINPNVVTFSALID-AFVKEGKLVEAEK---------LYDEMIKR 338
Query: 137 FSNDLTPAFGFFTWAKTQTGY-MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
+ P FT++ G+ MH D L ++K M+EL+ D N
Sbjct: 339 ---SIDP--DIFTYSSLINGFCMH---------DRLDEAKH---MFELMISKDCFPN--- 378
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ T +T+++ + R ++ +E FR M + G+ +T + L+ L + + A K+F
Sbjct: 379 -VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 437
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ D +P ++IL+ G CK K++ A + + + PD+ +Y IE C+
Sbjct: 438 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 497
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
D + KG KP+VI YT ++ + EA ++ +MK D LP++ Y
Sbjct: 498 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTY 557
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
++LI + G + E+ ++M+ G V + T + +I+ E++ L++L
Sbjct: 558 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 612
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+DDA EM Q P +V + + + F V + MQ + +Y
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + Q+ AL V KM PD SSL+ R+ +A + + M
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
PN +T+NT+I ++ A+ L+ +M C+PD TY ++ C++ + +
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLA 223
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M K + D Y +++ L + A + F EM +KGI P TY L
Sbjct: 224 LSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSL 280
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 84/174 (48%)
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++++A+ ++ +M LP ++ L+ ++K + + E M+ + ++ +YN
Sbjct: 44 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 103
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I+ C RS+ AL +L KM + +PD T + LL C KR+ L+ MF
Sbjct: 104 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVM 163
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ + T+ +L+ GL K A + + M+++G P TY + L K+
Sbjct: 164 EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 217
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 86/308 (27%), Positives = 152/308 (49%), Gaps = 10/308 (3%)
Query: 212 RYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
R D AV F + + + V +D + L+D L K A + + +N
Sbjct: 144 RPDLAVRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYN 203
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
L GWC+ + A ++ M + G +P +Y ++ + R R D +M+++
Sbjct: 204 TLADGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKR 263
Query: 331 G-----CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
G CKP V++YT ++H LG A Q+ +A KV+++M + C P + Y++LI ++ K G
Sbjct: 264 GSKDESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKG 323
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
V+DA +F+ M +G VPNV+TY +I C + + LKLL++M+ C+P +TY
Sbjct: 324 NVEDAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYN 383
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSM-DAGTYASLVRGLIESGKLE---LACSFFEE 501
L++ + M+ L M K + + + TY ++ + + E LA +E
Sbjct: 384 VLIRYLFEEGEMEKGLDLFEKMSKGEECLPNQDTYNIIISAMFMRKRAEDMVLAARMVDE 443
Query: 502 MISKGIVP 509
M+ +G +P
Sbjct: 444 MVDRGYLP 451
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/396 (26%), Positives = 189/396 (47%), Gaps = 7/396 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ GY +NT++ L K LV +M + L T ++ L + G
Sbjct: 177 VEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQ-RGCQPDLVTYGAVVNGLCKRGD 235
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFN 270
D A+ + M+K +E D + ++D L K ++ A+ +F +E K P +N
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRP-DVFTYN 294
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI C + DA + + M ++ +P+VV+++ I+ + +E + + EM ++
Sbjct: 295 SLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P + TY+ +++ +++EA ++E M S DC P+ Y++LI KA RV++
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+F +M ++G+V N +TYNT+I + + A K+ +KM D PD TY+ LL
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ +++ + ++ K+ + D TY ++ G+ ++GK+E F + KG+ P
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 511 HSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
Y + +K L KE + L KE T
Sbjct: 535 VIIYTTMISGFCRKGL---KEEADALFREMKEDGTL 567
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 174/365 (47%), Gaps = 2/365 (0%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YNT++D L K K + L +M E + T ++++ L GR+ DA
Sbjct: 257 IYNTIIDGLCKYKHIDDAFALFNKM-ETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSN 315
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M + + + S L+D VK + A K++ E K I ++ LI+G+C +
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A+ + M + P+VV+Y I+ +C+ K + + +EM ++G + +TY
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L +A + A K+++KM SD PD YS L+ L K G+++ A +FE ++K
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P++ TYN MI C + E+ L + KP+ Y ++ CRK + +
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M ++ D+G Y +L+R + G + +EM S G V ST M+ L
Sbjct: 556 ALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Query: 522 EKKRL 526
RL
Sbjct: 616 HDGRL 620
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 176/392 (44%), Gaps = 23/392 (5%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
L A G F Q+ + + +N ++ + K KKF L+ L + M L Y L +
Sbjct: 61 LDDAIGLF-GEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISY-DLYSY 118
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ R + A+ M K G E D LS L+ N H+ ++ D
Sbjct: 119 NILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLL------NGYCHSKRI----SD 168
Query: 261 CIPLSSQI-----------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+ L Q+ FN LIHG K +A + +M Q+G PD+V+Y +
Sbjct: 169 AVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVN 228
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
C+ D LK+M++ + V+ Y ++ L K K I++A ++ KM++ P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRP 288
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D Y+SLI L GR DA+ + +M ++ + PNV+T++ +I + + A KL
Sbjct: 289 DVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M + PD TY+ L+ C R+ + M D + TY +L++G ++
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
++E F EM +G+V TY L + L
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/355 (24%), Positives = 163/355 (45%), Gaps = 33/355 (9%)
Query: 77 RLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRR 136
R ++ SR+ S ++ +V S ++ + K+VEA K L ++ ++R
Sbjct: 305 RWSDASRLLSNMIERKINPNVVTFSALID-AFVKEGKLVEAEK---------LYDEMIKR 354
Query: 137 FSNDLTPAFGFFTWAKTQTGY-MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
+ P FT++ G+ MH D L ++K M+EL+ D N
Sbjct: 355 ---SIDP--DIFTYSSLINGFCMH---------DRLDEAKH---MFELMISKDCFPN--- 394
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ T +T+++ + R ++ +E FR M + G+ +T + L+ L + + A K+F
Sbjct: 395 -VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIF 453
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ D +P ++IL+ G CK K++ A + + + PD+ +Y IE C+
Sbjct: 454 KKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKA 513
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
D + KG KP+VI YT ++ + EA ++ +MK D LPD+ Y
Sbjct: 514 GKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCY 573
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
++LI + G + E+ ++M+ G V + T + +I+ E++ L++L
Sbjct: 574 NTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 628
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+DDA EM Q P +V + + + K F V + MQ + +Y
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + Q+ AL V KM PD SSL+ + R+ DA + + M +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+ +T+NT+I ++ A+ L+ +M + C+PD TY ++ C++ + +
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLA 239
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M K + D Y +++ GL + ++ A + F +M +KGI P TY L
Sbjct: 240 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSL 296
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 83/174 (47%)
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++++A+ ++ +M LP ++ L+ ++K + + E M+ + ++ +YN
Sbjct: 60 KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I+ C RS+ AL +L KM + +PD T + LL C KR+ L+ M +
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
D T+ +L+ GL K A + ++M+ +G P TY + L K+
Sbjct: 180 GYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKR 233
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 117/528 (22%), Positives = 238/528 (45%), Gaps = 59/528 (11%)
Query: 58 QSPDEDFVIPS--LAGWVESHRLNEKSRISS--RVLSENHETDVDKISKILSKQ-----Y 108
Q P+ F+I + + H+ +E S +SS R+L+ N + + KIL Y
Sbjct: 13 QFPNPKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCY 72
Query: 109 QSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT-QTGYMHTPEMYNTM 167
Q+ + ++ G++ + FS F F +A + GY T+
Sbjct: 73 QTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTL 132
Query: 168 VDVLGKSKKFCLMWELVKEMDELNNGYVSLA------TMSTIMRRLVRGGRYDDAVEAFR 221
+ K CL ++ + + ++ V+L T++ L + G+ A++ R
Sbjct: 133 I------KGLCLKGQIHQAL-HFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLR 185
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE------------------------ 257
+ V+ + + ++D++ K V A+ ++ E
Sbjct: 186 RVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILG 245
Query: 258 -FKDCIPLSSQI-----------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
D I L +++ F+IL+ G+CK +V +A+ + M +QG PDVV+Y
Sbjct: 246 KLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYC 305
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
++ YC K K M + G +V +Y I+++ K K+++EA+ ++++M
Sbjct: 306 SLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCK 365
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
+ +PD Y+SLI L K+G++ A ++ ++M +GV + +TYN+++ + C + + A
Sbjct: 366 NIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKA 425
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
+ LL KM+++ +PD TY L+ C+ R+K + + ++ TY +++G
Sbjct: 426 IALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQG 485
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
++ + A + +M G +P TY+++ L +K + E++
Sbjct: 486 FCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKL 533
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 140/324 (43%), Gaps = 34/324 (10%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKIS----------------- 101
SPD ++G+ +LN+ + ++++SE DV S
Sbjct: 228 SPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKN 287
Query: 102 --KILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMH 159
++ KQ PD V C + LV+Q + S F T A Q G
Sbjct: 288 VLAMMMKQGIKPDVVTY----CSLMDGYCLVKQVNKAKSI-------FNTMA--QGGVTA 334
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
+ YN M++ K KK L KEM N + T ++++ L + G+ A++
Sbjct: 335 NVQSYNIMINGFCKIKKVDEAMNLFKEM-HCKNIIPDVVTYNSLIDGLCKSGKISYALKL 393
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCK 278
M GV D + ++D L K + V+ A + + KD I + ILI G CK
Sbjct: 394 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCK 453
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
++ DAQ +++ +G++ V +YT I+ +C F K L +M++ GC P+ T
Sbjct: 454 GGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKT 513
Query: 339 YTIVMHALGKAKQINEALKVYEKM 362
Y I++ +L + + + A K+ +M
Sbjct: 514 YEIIILSLFEKDENDMAEKLLREM 537
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 95/197 (48%), Gaps = 5/197 (2%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFN 270
+ D+A+ F+ M + D + L+D L K + +A K+ E D +P +N
Sbjct: 351 KVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYN 410
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
++ CK +VD A + +M +G PD+ +YT I+ C+ + + +++ K
Sbjct: 411 SILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVK 470
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G +V TYT+++ ++AL + KM+ + C+P+ Y +I L + KD
Sbjct: 471 GYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFE----KDE 526
Query: 391 NEIFEDMKKQGVVPNVL 407
N++ E + ++ + +L
Sbjct: 527 NDMAEKLLREMIARGLL 543
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 183/365 (50%), Gaps = 5/365 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA---F 220
+N +++ L K K +++++M ++ ++ T +T++ + G+ +A
Sbjct: 166 FNIVINGLCKVGKLNKAGDIIEDM-KVRGVSANVITYNTLIDGYCKMGKIGKMYKADAIL 224
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKT 279
+ M+ G+ + ++L+D K +V A KVF E + + + +N LI+G C
Sbjct: 225 KEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNN 284
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
KV++A +M P+++++ + +C+ K ++ + +M ++G P+V TY
Sbjct: 285 GKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTY 344
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
I++ A K + + +A +Y M PD S Y+ LI L + G ++ A + +M
Sbjct: 345 NILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDT 404
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+ + +++TYN +I S C + E + AL+LL +M KP TY ++ C++ ++
Sbjct: 405 KHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRA 464
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L + M K + TY L++G + KLE A EM+ KG++P TY+++ E
Sbjct: 465 ALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTE 524
Query: 520 KLEKK 524
++ +K
Sbjct: 525 EMMEK 529
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 157/349 (44%), Gaps = 19/349 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFR 221
YNT++D K K M++ + E+ + + T + ++ + A++ F
Sbjct: 201 YNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFA 260
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTR 280
M + GV+ + + L++ L V A + + C+ + N L++G+CK +
Sbjct: 261 EMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNK 320
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V A + +M +QG +P+V +Y I+ YC++++ + M KG P V TY
Sbjct: 321 MVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYN 380
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L + + A + +M + D Y+ LI L G +K A + ++M ++
Sbjct: 381 CLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRK 440
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+ LTYNTMI C AL L +ME+ + TY L+K C+K +++
Sbjct: 441 GLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDA 500
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
N LL M + + + TY + EEM+ KG VP
Sbjct: 501 NGLLNEMLEKGLIPNRMTYEIVT----------------EEMMEKGFVP 533
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 122/261 (46%), Gaps = 3/261 (1%)
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
D +S I +IL+ + K + +A K G V S + + +
Sbjct: 87 DSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGD 146
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI- 378
++ KEM + +P++I++ IV++ L K ++N+A + E MK + Y++LI
Sbjct: 147 MEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLID 206
Query: 379 --FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+ K G++ A+ I ++M+ G+ PN +T+N +I C A+K+ +M
Sbjct: 207 GYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQG 266
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
KP+ TY L+ C ++ L M + + + T+ +L+ G ++ ++ A
Sbjct: 267 VKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAG 326
Query: 497 SFFEEMISKGIVPYHSTYKML 517
F++M +GI P +TY +L
Sbjct: 327 ELFDDMPKQGITPNVTTYNIL 347
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 87/195 (44%), Gaps = 19/195 (9%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNI 271
+DA +R M GV D + L+ L + +E A + E D L + + +NI
Sbjct: 358 EDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEM-DTKHLKADLITYNI 416
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI C ++ A + + EM ++G P ++Y I+ YC+E + R + +M++ G
Sbjct: 417 LIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVG 476
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+V TY +++ K ++ +A + +M +P+ Y
Sbjct: 477 RLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEI--------------- 521
Query: 392 EIFEDMKKQGVVPNV 406
+ E+M ++G VP++
Sbjct: 522 -VTEEMMEKGFVPDI 535
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 96/407 (23%), Positives = 193/407 (47%), Gaps = 13/407 (3%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
+ND+ A F Q E +N ++ L KSK + + L ++M E +L
Sbjct: 40 NNDVDDAVSLFNRLLQQNPTPPNIE-FNKILGSLVKSKHYHTVLYLSQKM-EFRGIKPNL 97
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
+ ++ + G A + K G + +T L+ L+ L + + + +
Sbjct: 98 VNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGK 157
Query: 258 FKDCIPLSSQI-----------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
KD + L +++ F IL+ G+CK +V +A+ + M QG P VV+Y
Sbjct: 158 LKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNS 217
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
++ Y K K M + G P + +Y+I+++ K K ++EA+++ ++M
Sbjct: 218 LMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQ 277
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+P+ YSSLI L K+G++ A ++ ++M +G PN++TY++++ + C + +NA+
Sbjct: 278 IIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAI 337
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
LL +M+ +P+ TY L+K C+ +++ + + +++ TY +++G
Sbjct: 338 ALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGF 397
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ G + A + +M G +P TY+++ L KK E++
Sbjct: 398 CDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKL 444
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 167/347 (48%), Gaps = 10/347 (2%)
Query: 154 QTGYMHTPEMYNTMVDVL---GK-SKKFCLMWELVKEMDELN-----NGYVSLATMSTIM 204
+ GY NT++ L GK K C++ +L +D N N + T + ++
Sbjct: 125 KMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILV 184
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IP 263
+ GR +A M G++ + LMD V A +F +
Sbjct: 185 DGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVS 244
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
Q ++ILI+G+CK + +D+A + +KEM + P+VV+Y+ I+ C+
Sbjct: 245 PDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKL 304
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+ EM ++G P+++TY+ ++ AL K Q++ A+ + +MK+ P+ Y+ LI L +
Sbjct: 305 VDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQ 364
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
+G+++DA ++FED+ +G NV TY MI C + + AL LL KME++ C P+ +T
Sbjct: 365 SGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKT 424
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
Y ++ +K ++ LL M + + L+ + +G
Sbjct: 425 YEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTG 471
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 157/303 (51%), Gaps = 1/303 (0%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
M + G+ VL++ K ++ A +VF E K I S +N LI G C K
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V++ K M+EM G SP+ +++ C ++ +C++ +D + M E+ +P V+ Y I
Sbjct: 315 VEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNI 374
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + ++ +A+ V E M P+ + Y+ LI S++G + A+ + ++MK++G
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ +V+TYN +I + C + E A+KLL +M E +P+ TY +++ C K +K
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ T M K + TY ++ + GK++ A EM+ K +VP TY+ ++E +
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Query: 522 EKK 524
+K
Sbjct: 555 MEK 557
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 149/326 (45%), Gaps = 4/326 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S ++++ ++ LV R D A +AFR + V D + ++ L + + A V
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214
Query: 256 LEFKD-CIPLSSQIFNILIHGWCKTRKVDD---AQKAMKEMFQQGFSPDVVSYTCFIEHY 311
+ K + S +N LI G+CK + +KEM + G SP V++ I Y
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C+ + +EM+++G SV+TY ++ L ++ E +K+ E+M+ P+
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
+ ++ K G + DAN+ + M ++ V P+V+ YN +I + E+A+ + +
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEA 394
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M + P+ TY L+ R + + LL M + + D TY L+ L G+
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454
Query: 492 LELACSFFEEMISKGIVPYHSTYKML 517
+ A +EM G+ P H TY +
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTI 480
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 4/208 (1%)
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+PS + ++ L AK+++ A K + PD ++++I L + G+++ A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALK---LLQKMEEDLCKPDCETYAPLLK 449
+ +D+K G+ P+V TYN++I C + N LL++M E P T+ L+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ + M + ++ TY SL+ GL GK+E EEM G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 510 YHSTYK-MLEEKLEKKRLGNAKERINKL 536
T+ +L+ +K + +A + I+ +
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGM 360
>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
Length = 762
Score = 148 bits (374), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 104/341 (30%), Positives = 169/341 (49%), Gaps = 7/341 (2%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGNSVEHAYKVF 255
+ T +++M L + GR +A + F M K G+E D L+ KG VE +
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
L ++ I +FNILI + K KVD+A +M Q G +P+VV+Y I C+
Sbjct: 361 LMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420
Query: 316 DFRKVDDTL---KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
VDD + ++M ++G P++I YT ++H+L + ++A ++ +M +T
Sbjct: 421 ---SVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTI 477
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
F++S+I K GRV ++ ++F+ M + GV PNV+TY+T+I C + + A KLL M
Sbjct: 478 FFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSM 537
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
KPDC TY L+ CR RM L M + VS + TY +++GL + +
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRT 597
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
A + + G STY ++ L K L + R+
Sbjct: 598 AAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRM 638
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 181/410 (44%), Gaps = 78/410 (19%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ + +T++ + G D A + M + D S ++ L KG +++ A +V
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLT 255
Query: 257 EF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC--- 312
K+ + + +N ++HG+C + + +A +K+M G PDVV+Y +++ C
Sbjct: 256 TMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNG 315
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIV------------MHAL-------------- 346
R + RK+ D+ M ++G +P + TY + MHAL
Sbjct: 316 RSTEARKIFDS---MTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHH 372
Query: 347 ---------GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
K ++++EA+ V+ KM+ P+ Y ++I IL K+G V DA FE M
Sbjct: 373 VFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQM 432
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKL-LQKMEEDLC------------------- 437
+G+ PN++ Y ++I S C + + A +L L+ ++ +C
Sbjct: 433 IDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRV 492
Query: 438 ---------------KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
KP+ TY+ L+ C +M LL+ MF + D TY +L
Sbjct: 493 IESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTL 552
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
+ G +++ A + F+EM+S G+ P TY ++ + L +R AKE
Sbjct: 553 INGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKE 602
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 157/332 (47%), Gaps = 5/332 (1%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVE-AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
V T + +++ L R DA++ R M + D + ++L+ L N + A +
Sbjct: 120 VEAITFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALE 179
Query: 254 VFLEFKDCIPLSSQ----IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+ D S + +I+G+ K D A EM + SPDVV+Y+ I
Sbjct: 180 LLHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIA 239
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
C+ + K + L M + G P+ +TY ++H ++Q EA+ +KM+SD P
Sbjct: 240 ALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEP 299
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D Y+SL+ L K GR +A +IF+ M K+G+ P++ TY T++ + LL
Sbjct: 300 DVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALL 359
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
M + PD + L+ +++++ + + M ++ ++ + TY +++ L +S
Sbjct: 360 DLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKS 419
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
G ++ A +FE+MI +G+ P Y L L
Sbjct: 420 GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 146/311 (46%), Gaps = 1/311 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFN 270
+ D+A+ F M+++G+ + ++ L K SV+ A F + D + + ++
Sbjct: 386 KVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYT 445
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LIH C K D A++ + EM +G + + + I +C+E + + M
Sbjct: 446 SLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRI 505
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G KP+VITY+ ++ A +++EA K+ M S PD Y++LI + R+ DA
Sbjct: 506 GVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDA 565
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+F++M GV PN++TYN ++ A +L + + + + TY +L
Sbjct: 566 LALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHG 625
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ + ++ D+ ++ T+ ++ L++ G+ + A F + + G+VP
Sbjct: 626 LCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPD 685
Query: 511 HSTYKMLEEKL 521
TY ++ E L
Sbjct: 686 VRTYSLMAENL 696
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 136/313 (43%), Gaps = 45/313 (14%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR-KVDDTLKEM 327
+ ILI C+ ++D A+ + ++GF + +++T ++ C +K +D L+ M
Sbjct: 90 YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD-------DCL------------ 368
E C P V + TI++ L + EAL++ M D D +
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKE 209
Query: 369 -------------------PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
PD YSS+I L K + A E+ M K GV+PN +TY
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
N+++ C+ + + A+ L+KM D +PD TY L+ C+ R + M K
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML------EEKLEK 523
+ D TY +L++G G L + + M+ GI P H + +L +EK+++
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389
Query: 524 KRLGNAKERINKL 536
L +K R + L
Sbjct: 390 AMLVFSKMRQHGL 402
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 143/362 (39%), Gaps = 93/362 (25%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T ++ L + G DDA+ F M G+ + + L+ +L + + A ++
Sbjct: 405 NVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELI 464
Query: 256 LEFKD-CIPLSSQIFNILIH-----------------------------------GWCKT 279
LE D I L++ FN +IH G+C
Sbjct: 465 LEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLA 524
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSV 336
K+D+A K + MF G PD V+Y I YCR ++DD L KEM G P++
Sbjct: 525 GKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCR---VSRMDDALALFKEMVSSGVSPNI 581
Query: 337 I-----------------------------------TYTIVMHALGKAKQINEALKVYEK 361
I TY I++H L K +EAL++++
Sbjct: 582 ITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQN 641
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
+ D +T ++ +I L K GR +A ++F + G+VP+V TY+ M + +
Sbjct: 642 LCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGL 701
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
E L MEE+ C + ++LN ++ + + AGTY S
Sbjct: 702 LEELDDLFLSMEENGCTANS----------------RMLNSIVRKLLQRGDITRAGTYLS 745
Query: 482 LV 483
++
Sbjct: 746 MI 747
>gi|224109914|ref|XP_002333182.1| predicted protein [Populus trichocarpa]
gi|222835036|gb|EEE73485.1| predicted protein [Populus trichocarpa]
Length = 319
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 152/283 (53%), Gaps = 8/283 (2%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
T + ++ L + G+ +A + M + GVE +T S LM+ + N V A KVF
Sbjct: 11 VTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNA 70
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ + CIP +NILI+G CK +++D+A++ EM +G P+ +Y + + ++K
Sbjct: 71 MITRGCIP-DVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWKQK 129
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
K+M +GC P ++TY+I +H L K +++AL+++ +M+++ PD Y+
Sbjct: 130 I-----QLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYN 184
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
LI + K+G+++DA E+F + +G++P+V ++ ++IS C + A K ++ME D
Sbjct: 185 ILIDAMCKSGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERD 244
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
C PDC +Y +++ + L MF S DA T
Sbjct: 245 GCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALT 287
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 133/285 (46%), Gaps = 30/285 (10%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FNIL+ CK K+ +AQ +K M ++G P+ V+Y+ + Y + + M
Sbjct: 13 FNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKVFNAMI 72
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL----------- 377
+GC P V++Y I+++ KA++I+EA +++++M +P+T+ Y++L
Sbjct: 73 TRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWKQKIQL 132
Query: 378 -----------------IFI--LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
IF+ LSK G + A E+F +M+ + P+++ YN +I + C
Sbjct: 133 FKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVIYNILIDAMCK 192
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ E+A +L K+ PD ++ ++ CR+ + M ++ D +
Sbjct: 193 SGKLEDARELFLKLHVKGLLPDVRSWTSIISGLCREGLLDEAYKAFRQMERDGCPPDCCS 252
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
Y +VRG +++ A F+EM +G T + + L K
Sbjct: 253 YNVIVRGFLQNNGASRAEQLFQEMFDRGFSADALTRTLAADLLSK 297
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 109/211 (51%), Gaps = 5/211 (2%)
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PD V++ ++ C++ + +K M EKG +P+ +TY+ +M+ ++ EA KV
Sbjct: 8 PDAVTFNILVDTLCKKGKISEAQGIVKTMIEKGVEPNTVTYSSLMNGYLLQNRVFEARKV 67
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+ M + C+PD Y+ LI KA R+ +A +IF++M +G++PN TYNT++
Sbjct: 68 FNAMITRGCIPDVLSYNILINGCCKAQRIDEAKQIFDEMSFRGLIPNTATYNTLLGGFWK 127
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ ++L + M C PD TY+ L ++ + L M N ++ D
Sbjct: 128 QK-----IQLFKDMHAQGCSPDLVTYSIFLHGLSKQGYLDQALELFREMQNNYLNPDLVI 182
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVP 509
Y L+ + +SGKLE A F ++ KG++P
Sbjct: 183 YNILIDAMCKSGKLEDARELFLKLHVKGLLP 213
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G + YNT++ K K +L K+M L T S + L + G D
Sbjct: 110 GLIPNTATYNTLLGGFWKQK-----IQLFKDM-HAQGCSPDLVTYSIFLHGLSKQGYLDQ 163
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILI 273
A+E FR M+ + D ++L+D + K +E A ++FL+ K +P + + +I
Sbjct: 164 ALELFREMQNNYLNPDLVIYNILIDAMCKSGKLEDARELFLKLHVKGLLP-DVRSWTSII 222
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G C+ +D+A KA ++M + G PD SY + + + + + +EM ++G
Sbjct: 223 SGLCREGLLDEAYKAFRQMERDGCPPDCCSYNVIVRGFLQNNGASRAEQLFQEMFDRGFS 282
Query: 334 PSVITYTIVMHALGK 348
+T T+ L K
Sbjct: 283 ADALTRTLAADLLSK 297
>gi|297724885|ref|NP_001174806.1| Os06g0499301 [Oryza sativa Japonica Group]
gi|52076487|dbj|BAD45366.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|125597333|gb|EAZ37113.1| hypothetical protein OsJ_21452 [Oryza sativa Japonica Group]
gi|255677074|dbj|BAH93534.1| Os06g0499301 [Oryza sativa Japonica Group]
Length = 642
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 103/421 (24%), Positives = 191/421 (45%), Gaps = 21/421 (4%)
Query: 132 QTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN 191
++LRRF L P F P +DV ++ E++ D
Sbjct: 153 RSLRRFPGRLAPTLLSFNLLLKCVCSSLVPRDPGRYLDV-----ALRILHEIIPGWDLAP 207
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
+ + T ST++ L GR DDAV M GV A + ++ +++ V+ A
Sbjct: 208 DKF----TYSTVVSALADAGRVDDAVALVHEMVADGVVA-AEAFNPVLRAMLRAGDVKGA 262
Query: 252 YKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
K+F ++ K C+P ++ +N+L+HG + A M+ M ++G P V++Y ++
Sbjct: 263 AKLFGFMQLKGCVP-TTATYNVLVHGLLVCGRAGAAMGVMRRMEREGVVPGVMTYGAVVD 321
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
R + +EM+ G + Y+ V+ K+ +I+ ALKV+E M + P
Sbjct: 322 GLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKSGEIDCALKVWEAMVASPVRP 381
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ YS++I L+ G++ +A +F +M PN++TY ++I + AL +
Sbjct: 382 NVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIITYGSIIQGYFKIGDTSRALSVW 441
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
++M C P+ +Y+ L+ C R+K + HM + D Y S+++GL S
Sbjct: 442 EEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAPDTIAYTSMIKGLCVS 501
Query: 490 GKLELACSFFEEMISKG-----IVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
G ++ F +M++ G ++ Y+ +L+ L K L A + +N++L +
Sbjct: 502 GMVDGGLRLFYDMLASGHADPDVISYNV---LLDGLLLAKDLPRAMDLLNRMLDQGCDPD 558
Query: 545 T 545
T
Sbjct: 559 T 559
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 151/321 (47%), Gaps = 10/321 (3%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
N ++ LR + D+ A F + + + G + T YN +V L + +++
Sbjct: 247 NPVLRAMLR--AGDVKGAAKLFGFMQLK-GCVPTTATYNVLVHGLLVCGRAGAAMGVMRR 303
Query: 187 MDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
M+ G V + T ++ LVR GR DA + M++ G+ + S ++ K
Sbjct: 304 MER--EGVVPGVMTYGAVVDGLVRCGRVKDAWKVAEEMERNGLAWNEFVYSTVITGFCKS 361
Query: 246 NSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
++ A KV+ E P+ + ++ +I G K+ +A+ +EM +P++++
Sbjct: 362 GEIDCALKVW-EAMVASPVRPNVVLYSAMIGGLANFGKMTEAELLFREMIHSKCAPNIIT 420
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y I+ Y + D + +EM GC P+ ++Y+I+++ L ++ +A+ V++ M
Sbjct: 421 YGSIIQGYFKIGDTSRALSVWEEMIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHML 480
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV-PNVLTYNTMISSACARSEE 422
C PDT Y+S+I L +G V +F DM G P+V++YN ++ +
Sbjct: 481 DRGCAPDTIAYTSMIKGLCVSGMVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDL 540
Query: 423 ENALKLLQKMEEDLCKPDCET 443
A+ LL +M + C PD T
Sbjct: 541 PRAMDLLNRMLDQGCDPDTVT 561
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/280 (20%), Positives = 109/280 (38%), Gaps = 25/280 (8%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+Y+ M+ L K L +EM + ++ T +I++ + G A+ +
Sbjct: 385 LYSAMIGGLANFGKMTEAELLFREMIH-SKCAPNIITYGSIIQGYFKIGDTSRALSVWEE 443
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTR 280
M G + + S+L++ L ++ A V+ D C P + + +I G C +
Sbjct: 444 MIGAGCVPNAVSYSILINGLCNVGRLKDAMMVWKHMLDRGCAP-DTIAYTSMIKGLCVSG 502
Query: 281 KVDDAQKAMKEMFQQGFS-PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
VD + +M G + PDV+SY ++ KD + D L M ++GC P +T
Sbjct: 503 MVDGGLRLFYDMLASGHADPDVISYNVLLDGLLLAKDLPRAMDLLNRMLDQGCDPDTVTC 562
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
I + G ++ F L+ L R A E+ M
Sbjct: 563 NIFLREFGAGERKGR-----------------EFLEGLVVRLCDRRRNMAAGEVLMVMLA 605
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+ +VP + ++ C R + +++ K +++ P
Sbjct: 606 KYIVPEAPIWEMVVRDVCRR---KRVWRVIDKCWDEIWGP 642
>gi|297812025|ref|XP_002873896.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297319733|gb|EFH50155.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 507
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 196/394 (49%), Gaps = 6/394 (1%)
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
+L + D A F A Q G+ H Y+ ++D L + KKF + ++ +M +
Sbjct: 62 SLMKRERDPQRALDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQM-KYET 120
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG-VEKDTRALSVLMDTLVKGNSVEHA 251
+ +MR R +D +E F ++ V+ A+S ++ L+ V+ A
Sbjct: 121 CRFQESLFLNLMRHFSRFDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVDLA 180
Query: 252 YKVFLEFKDCIPLSSQ--IFNILIHGWCKTRKVDDAQKAMKEMFQQGFS-PDVVSYTCFI 308
K+ L K + L IFNIL+ CK +D A + ++EM + G S P+ ++Y+ +
Sbjct: 181 RKLLLYAKHNLALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLM 240
Query: 309 EHYCREKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
+ + ++ + ++M ++G P + + ++++ ++ ++ A + + MK + C
Sbjct: 241 DCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGC 300
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P+ YS+L+ K G++++A ++F+++KK G+ + + Y T+++ C E + A+K
Sbjct: 301 NPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMK 360
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
LL +M+ C+ D TY +L+ + R + +L V ++ G+Y ++ L
Sbjct: 361 LLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALC 420
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+G+LE A F M +GI P+H+T+ L +L
Sbjct: 421 CNGELEKAVKFLSVMSKRGIWPHHATWNELVVRL 454
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 133/262 (50%), Gaps = 3/262 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVE-KDTRALSVLMDTLVKGNSVEHAYKVFLEF- 258
+ +++ + G D A MK+ G+ ++ S LMD L + + A ++F +
Sbjct: 201 NILVKHHCKNGDIDSAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMI 260
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K I IFN++I+G+C++ +V+ A+ + M + G +P+V +Y+ + +C+E
Sbjct: 261 SKRGISPDPVIFNVMINGFCRSGEVERAKMILDFMKKNGCNPNVYNYSALMNGFCKEGKI 320
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
++ E+++ G K + YT +M+ L + +I+EA+K+ +MK+ C D Y+ +
Sbjct: 321 QEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEAMKLLGEMKASRCRADALTYNVI 380
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ LS GR ++A ++ + +GV N +Y ++++ C E E A+K L M +
Sbjct: 381 LRGLSSEGRSEEALQMLDQWGCEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSKRGI 440
Query: 438 KPDCETYAPLLKMCCRKKRMKV 459
P T+ L+ C ++
Sbjct: 441 WPHHATWNELVVRLCESGNTEI 462
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/335 (22%), Positives = 150/335 (44%), Gaps = 11/335 (3%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
S ++ A +AK ++N +V K+ + +V+EM Y +
Sbjct: 174 SGEVDLARKLLLYAKHNLALQPNTCIFNILVKHHCKNGDIDSAFRVVEEMKRSGISYPNS 233
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
T ST+M L R +AVE F M K G+ D +V+++ + VE A K+ L
Sbjct: 234 ITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNVMINGFCRSGEVERA-KMIL 292
Query: 257 EFKDCIPLSSQIFN--ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+F + ++N L++G+CK K+ +A++ E+ + G D V YT + CR
Sbjct: 293 DFMKKNGCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRN 352
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + L EM+ C+ +TY +++ L + EAL++ ++ + + Y
Sbjct: 353 GEIDEAMKLLGEMKASRCRADALTYNVILRGLSSEGRSEEALQMLDQWGCEGVHLNKGSY 412
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++ L G ++ A + M K+G+ P+ T+N ++ C E +++L
Sbjct: 413 RIILNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCESGNTEIGVRVLIGFLG 472
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
P +++ +++ C++++ L H+F+
Sbjct: 473 IGLIPAPKSWGAVVESICKERK-------LVHVFE 500
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/330 (20%), Positives = 132/330 (40%), Gaps = 46/330 (13%)
Query: 110 SPDKVVEALKGCGVSVSNSLVEQTLRR--FSNDLT-PAFGFFTWAKTQTGYMHTPEMYNT 166
S +VVE +K G+S NS+ TL F+ + A F ++ G P ++N
Sbjct: 215 SAFRVVEEMKRSGISYPNSITYSTLMDCLFAQSRSKEAVELFEDMISKRGISPDPVIFNV 274
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
M++ FC R G + A MKK
Sbjct: 275 MIN------GFC------------------------------RSGEVERAKMILDFMKKN 298
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDA 285
G + S LM+ K ++ A +VF E K + L + + L++ C+ ++D+A
Sbjct: 299 GCNPNVYNYSALMNGFCKEGKIQEAKQVFDEVKKTGLKLDTVGYTTLMNCLCRNGEIDEA 358
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI---TYTIV 342
K + EM D ++Y + E + ++ L+ + + GC+ + +Y I+
Sbjct: 359 MKLLGEMKASRCRADALTYNVILRGLSSEG---RSEEALQMLDQWGCEGVHLNKGSYRII 415
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++AL ++ +A+K M P + ++ L+ L ++G + + G+
Sbjct: 416 LNALCCNGELEKAVKFLSVMSKRGIWPHHATWNELVVRLCESGNTEIGVRVLIGFLGIGL 475
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKM 432
+P ++ ++ S C + + +LL +
Sbjct: 476 IPAPKSWGAVVESICKERKLVHVFELLDSL 505
>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 148 bits (373), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 98/360 (27%), Positives = 172/360 (47%), Gaps = 3/360 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N M+ K L ++ +E+ + NN +L T + ++ + G D+A++ M
Sbjct: 82 HNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKLLDEM 141
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G+E DT +V+ L K V+ A++ L + C P +NIL+ K
Sbjct: 142 LSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKP-DVITYNILLRALLNQGK 200
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
D+ +K M E+F +G P+VV+Y+ I CR+ + + +K M+EKG P Y
Sbjct: 201 WDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDP 260
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ A + +++ A++ + M D LPD Y++++ L K G A EIF + + G
Sbjct: 261 LIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVG 320
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PNV +YNTM+S+ + + AL ++ +M PD TY L+ CR +
Sbjct: 321 CPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVDEAI 380
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL M + +Y +++ GL ++ +++ A MI G P +TY +L E +
Sbjct: 381 GLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLIEGI 440
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 159/318 (50%), Gaps = 12/318 (3%)
Query: 228 VEKDTRALSVLMDTLVKG----NSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
V KD + +L L+KG +++ A +V + +N +I G+CK +++
Sbjct: 2 VAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRIE 61
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE----KGCKPSVITY 339
A+ + M ++GFSPDVV++ I +C + K+D LK +E CKP++ITY
Sbjct: 62 SAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKG---KIDLALKVFEELLKDNNCKPTLITY 118
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
TI++ A I+EALK+ ++M S PDT Y+ + L K G+V A E +
Sbjct: 119 TILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNS 178
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G P+V+TYN ++ + + + + K + ++ C+P+ TY+ L+ CR +++
Sbjct: 179 RGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEE 238
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L+ M + ++ DA Y L+ GKL++A F + MI G +P Y +
Sbjct: 239 SVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMA 298
Query: 520 KLEKKRLGN-AKERINKL 536
L K G+ A E KL
Sbjct: 299 ALCKNGNGDHAVEIFGKL 316
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 147/320 (45%), Gaps = 4/320 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+ ++ + R + A MK+ G D ++++ T ++ A KVF E
Sbjct: 48 NAVISGFCKANRIESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLK 107
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+C P + + ILI + +D+A K + EM +G PD +Y C+E
Sbjct: 108 DNNCKP-TLITYTILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKV 166
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + ++ + +GCKP VITY I++ AL + +E K ++ S C P+ YS L
Sbjct: 167 DRAFEFVRTLNSRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSIL 226
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L + G+++++ + + MK++G+ P+ Y+ +I++ C + + A++ L M D
Sbjct: 227 ISSLCRDGKIEESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGF 286
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD Y ++ C+ + + + + +Y +++ L SG A
Sbjct: 287 LPDIVNYNTIMAALCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALG 346
Query: 498 FFEEMISKGIVPYHSTYKML 517
+M+SKGI P TY L
Sbjct: 347 MISQMLSKGIDPDVITYNSL 366
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/218 (22%), Positives = 96/218 (44%), Gaps = 6/218 (2%)
Query: 160 TPEMY--NTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
TP+ Y + ++ + K + E + M + +G++ + +TIM L + G D A
Sbjct: 252 TPDAYCYDPLIAAFCREGKLDMAIEFLDCM--ICDGFLPDIVNYNTIMAALCKNGNGDHA 309
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHG 275
VE F + + G + + + ++ L A + + I +N LI
Sbjct: 310 VEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISC 369
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
C+ VD+A + +M F P++VSY + C+ + L M E GC+P+
Sbjct: 370 LCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPN 429
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
TYT+++ +G + +A+++ + + + + SF
Sbjct: 430 ETTYTLLIEGIGFSGSRTQAMELANSLYIMNAISEDSF 467
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 166/361 (45%), Gaps = 43/361 (11%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
++ + + +Y M +G+ D L++L+++ N + A+ V + +
Sbjct: 75 LLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKI---L 131
Query: 263 PLSSQ----IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
L Q F LI G C K+ DA +M +GF P+VV+Y I C+ +
Sbjct: 132 KLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTN 191
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
L+ M++ C+P V+ YT ++ +L K +Q+ EA ++ KM PD Y+SLI
Sbjct: 192 AAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLI 251
Query: 379 F-----------------------------------ILSKAGRVKDANEIFEDMKKQGVV 403
L K G++ +A+++ + M +GV
Sbjct: 252 HSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVE 311
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
PNV+TYN ++ C +SE + A+K+ M + P+ +Y L+ C+ +RM +L
Sbjct: 312 PNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYL 371
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
M + ++ + TY +L+ G+L+ A + F EM++ G +P +TY++L + L K
Sbjct: 372 FEEMCQKELIPNTVTYNTLMH-XCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCK 430
Query: 524 K 524
K
Sbjct: 431 K 431
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/463 (21%), Positives = 197/463 (42%), Gaps = 76/463 (16%)
Query: 144 AFGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMS 201
F F AK + G+ + T++ L K L +M + G+ ++ T
Sbjct: 121 GFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKM--IGEGFQPNVVTYG 178
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF------ 255
T++ L + G + A+ R M++ + D + ++D+L K V A+ +F
Sbjct: 179 TLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQ 238
Query: 256 -------------------LEFKDCIPLSSQ-----------IFNILIHGWCKTRKVDDA 285
E+K L +Q IF+ ++ CK K+ +A
Sbjct: 239 GISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEA 298
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ M +G P+VV+Y ++ +C + + + M G P+VI+Y +++
Sbjct: 299 HDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLING 358
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K +++++A ++E+M + +P+T Y++L+ GR++DA +F +M G +P+
Sbjct: 359 YCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPD 417
Query: 406 VLTYNTMISSACARSEEENALKLLQKME---------------EDLCK------------ 438
+ TY ++ C +S + A+ LL+ +E + +C+
Sbjct: 418 LATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFS 477
Query: 439 --------PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
P+ TY ++ CR+ + N L M N S D TY ++ +GL+++
Sbjct: 478 NLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNK 537
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ A +EM+++G ST +L E L +L + ++I
Sbjct: 538 EALRAIQLLQEMLARGFSADVSTTTLLVEMLCDDKLDQSVKQI 580
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 161/351 (45%), Gaps = 8/351 (2%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLA 198
+T AF F+ G +P+++ T ++ C + ++++ N + +
Sbjct: 225 VTEAFNLFS---KMVGQGISPDIF-TYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVV 280
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
ST++ L + G+ +A + M GVE + + LMD + ++ A KVF
Sbjct: 281 IFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTM 340
Query: 259 KDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ I +N LI+G+CK +++D A +EM Q+ P+ V+Y + H C
Sbjct: 341 VHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRL 399
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ EM G P + TY I++ L K ++EA+ + + ++ + PD Y+ +
Sbjct: 400 QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIV 459
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + +AG ++ A +IF ++ +G+ PNV TY MI+ C R + A KL +M+ + C
Sbjct: 460 IDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGC 519
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
PD TY + + + K LL M S D T LV L +
Sbjct: 520 SPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVSTTTLLVEMLCD 570
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 121/262 (46%), Gaps = 1/262 (0%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA + M P V + + + K + V +M G P V T I
Sbjct: 50 LDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNI 109
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++ ++ A V K+ PDT+ +++LI L G++ DA +F+ M +G
Sbjct: 110 LINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEG 169
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PNV+TY T+I+ C A++LL+ ME+ C+PD Y ++ C+ +++
Sbjct: 170 FQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAF 229
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + M +S D TY SL+ L + + + +MI+ I+P + + + L
Sbjct: 230 NLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDAL 289
Query: 522 EKK-RLGNAKERINKLLAHAKE 542
K+ ++ A + ++ ++ E
Sbjct: 290 CKEGKITEAHDVVDMMIIRGVE 311
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 110/255 (43%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P S+ FN L+ KT++ +M G PDV + I +C
Sbjct: 66 PPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFS 125
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L ++ + G +P T+T ++ L +I +AL +++KM + P+ Y +LI L
Sbjct: 126 VLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLC 185
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K G A + M++ P+V+ Y ++I S C + A L KM PD
Sbjct: 186 KVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIF 245
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ C K + LL M + + D ++++V L + GK+ A + M
Sbjct: 246 TYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMM 305
Query: 503 ISKGIVPYHSTYKML 517
I +G+ P TY L
Sbjct: 306 IIRGVEPNVVTYNAL 320
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 126/275 (45%), Gaps = 15/275 (5%)
Query: 164 YNTMVDVLGKSKKFCL---MWELVKEMDEL-NNGYV-SLATMSTIMRRLVRGGRYDDAVE 218
YN ++D CL M E VK D + +NGY ++ + +T++ + R D A
Sbjct: 317 YNALMD------GHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATY 370
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGW 276
F M + + +T + LM G ++ A +F E IP + IL+
Sbjct: 371 LFEEMCQKELIPNTVTYNTLMHXCHVGR-LQDAIALFHEMVAHGQIP-DLATYRILLDYL 428
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK +D+A +K + PD+ YT I+ CR + D + KG +P+V
Sbjct: 429 CKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNV 488
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TYTI+++ L + ++EA K++ +M + C PD Y+++ L + A ++ ++
Sbjct: 489 RTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQE 548
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
M +G +V T ++ C +++ ++L +
Sbjct: 549 MLARGFSADVSTTTLLVEMLCDDKLDQSVKQILSE 583
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 206/471 (43%), Gaps = 48/471 (10%)
Query: 105 SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT-QTGYMHTPEM 163
+KQYQ+ + + ++ G+ + FS F F +AK + GY
Sbjct: 71 AKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVT 130
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM----DELNNGY-VSLATMSTIMRRLVRGGRYDDAVE 218
+ ++ K CL E+ K + + G+ + + T++ L R G AV+
Sbjct: 131 FTILI------KGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQ 184
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF------KDCIPLSSQI---- 268
R + V + S ++D++ K V A+ ++ E D + SS I
Sbjct: 185 LLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFC 244
Query: 269 --------------------------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
F+ILI G+CK KV +A+ + M ++ DVV
Sbjct: 245 VVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVV 304
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+Y ++ YC K K M ++G P V +Y+I+++ K K ++EA+K++E+M
Sbjct: 305 TYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEM 364
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
P+ Y+SL+ L K+GR A E+ ++M +G N++TYN+++ + C +
Sbjct: 365 HCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHV 424
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+ A+ LL K++E +PD TY L+ C+ R+ + + S + TY SL
Sbjct: 425 DKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSL 484
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ G G + + +M G +P TY++L L +K + E++
Sbjct: 485 INGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKL 535
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 151/322 (46%), Gaps = 1/322 (0%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDC 261
I+ L++ +Y A+ + M+ G++ D ++LM+ + ++ ++ VF + K
Sbjct: 64 ILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKG 123
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ F ILI G C +V A ++ QGF D VSY I CR + +
Sbjct: 124 YHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAV 183
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L+ + K +P+V+ Y+ ++ ++ K K +N+A +Y +M S PD YSSLI
Sbjct: 184 QLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGF 243
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
G++K A ++F M + PNV T++ +I C + A +L M + K D
Sbjct: 244 CVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDV 303
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ C K++ L M + V+ D +Y+ ++ G + ++ A FEE
Sbjct: 304 VTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEE 363
Query: 502 MISKGIVPYHSTYKMLEEKLEK 523
M K I P TY L + L K
Sbjct: 364 MHCKQIFPNVVTYNSLVDGLCK 385
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 35/199 (17%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN++VD L KS + ELV EM + ++ T ++I+ + + D A+ +
Sbjct: 376 YNSLVDGLCKSGRTSCALELVDEMHDRGQPS-NIITYNSILDAICKNNHVDKAIVLLTKI 434
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
K+ G++ D +VL++ L CK ++D
Sbjct: 435 KEKGIQPDIFTYTVLINGL----------------------------------CKVGRLD 460
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
DAQK +++ +G+SP++ +YT I +C + F + L +M++ GC P+ ITY I++
Sbjct: 461 DAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILI 520
Query: 344 HALGKAKQINEALKVYEKM 362
H+L + + ++A K+ +M
Sbjct: 521 HSLFEKDENDKAEKLLREM 539
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 1/191 (0%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNIL 272
D+A++ F M + + + L+D L K A ++ E D S+ I +N +
Sbjct: 355 DEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSI 414
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+ CK VD A + ++ ++G PD+ +YT I C+ +++ KG
Sbjct: 415 LDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGY 474
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P++ TYT +++ +E L + KMK + C+P+ Y LI L + A +
Sbjct: 475 SPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEK 534
Query: 393 IFEDMKKQGVV 403
+ +M +G++
Sbjct: 535 LLREMIARGLL 545
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 2/140 (1%)
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
+ K +P + + ++ S + + AL L Q+ME + KPD T L+ +
Sbjct: 49 LHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGH 108
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+K + + K DA T+ L++GL G++ A F ++++++G +Y
Sbjct: 109 IKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGT 168
Query: 517 LEEKLEKKRLGNAKERINKL 536
L L R+G K + L
Sbjct: 169 LINGL--CRVGETKAAVQLL 186
>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
Length = 1167
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/427 (27%), Positives = 201/427 (47%), Gaps = 17/427 (3%)
Query: 106 KQYQSPDKVVEALK--GCGVSVS--NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTP 161
+++ + KV+ ++ GCG++ N L+ R S + AFGF K Y P
Sbjct: 131 REFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR--SGAVEEAFGF---KKDMEDYGLVP 185
Query: 162 E--MYNTMVDVLGKSKKFCLMWELVKEMD--ELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
+ Y +++ L KS++ L+ EM EL V A + + +R G D+A
Sbjct: 186 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL---IDGFMREGNADEAF 242
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGW 276
+ + M GV+ + L+ L K ++ A + + +D + +N++I G
Sbjct: 243 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 302
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ DA + + EM G SP+V +Y+ I C+ + K D L+EM KG KP+
Sbjct: 303 FRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 362
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
Y ++ + ++ A ++++KM + LPD Y+SLIF LSK GRV+++ + F
Sbjct: 363 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 422
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M+++G++PN TY+ +I + E+A +L+Q+M + KP+ Y LL+ +
Sbjct: 423 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 482
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ ++ M V +D Y L+ L SG +E A E+ G VP Y
Sbjct: 483 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSS 542
Query: 517 LEEKLEK 523
L L K
Sbjct: 543 LISGLCK 549
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 165/329 (50%), Gaps = 3/329 (0%)
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
++G+ S A + ++ + GR DA E M+ G+ R + L+ L++ +++
Sbjct: 41 DSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMAL 100
Query: 251 AYKVFLEFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
+KV EF +S ++ + LI +CK R+ D A+K + EM ++G + V+Y I
Sbjct: 101 LWKV-REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLI 159
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
CR + K+M++ G P TY +++ L K+++ NEA + ++M +
Sbjct: 160 AGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 219
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P+ Y++LI + G +A ++ ++M GV PN +TY+ ++ C + + A L
Sbjct: 220 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 279
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
L++M D +PD TY +++ R K LL+ M +S + TY+ ++ GL +
Sbjct: 280 LKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 339
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKML 517
SG+ E A EEM +KG+ P Y L
Sbjct: 340 SGEPEKASDLLEEMTTKGLKPNAFVYAPL 368
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 138/299 (46%), Gaps = 1/299 (0%)
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
R G A E F M K V D + L+ L K VE + K F + ++ L ++
Sbjct: 374 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 433
Query: 269 -FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
++ LIHG+ K ++ A++ ++ M G P+ V Y +E Y + D KV T K M
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++G Y I++H L + + A +V +++ + +PD YSSLI L K
Sbjct: 494 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+ A I ++M K+GV PN++ YN +I C + A + + P+C TY L
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 613
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
+ C+ + +L M ++ DA Y+ L G +G LE A EEM +G
Sbjct: 614 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 672
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/429 (25%), Positives = 198/429 (46%), Gaps = 49/429 (11%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVR 209
A + +G+ +P + + +VD KS + E+V M + G S+ + +++ L+R
Sbjct: 38 ALSDSGH-RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRD--RGLAPSIRCCNALLKDLLR 94
Query: 210 GGRYDDAVEAFRGMKKY----GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPL 264
DA+ ++++ G+ D S L++ K + A KV +E ++ L
Sbjct: 95 A----DAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGL 150
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD------------------------ 300
++ +N+LI G C++ V++A K+M G PD
Sbjct: 151 NTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALL 210
Query: 301 -----------VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
VV Y I+ + RE + + +KEM G +P+ ITY ++ L K
Sbjct: 211 DEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKM 270
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
Q++ A + ++M D PDT Y+ +I + KDA + +M+ G+ PNV TY
Sbjct: 271 GQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTY 330
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
+ MI C E E A LL++M KP+ YAPL+ CR+ + + + M K
Sbjct: 331 SIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTK 390
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGN 528
+V D Y SL+ GL + G++E + +F +M +G++P TY ++ L+ L +
Sbjct: 391 VNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLES 450
Query: 529 AKERINKLL 537
A++ + ++L
Sbjct: 451 AEQLVQRML 459
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 190/423 (44%), Gaps = 15/423 (3%)
Query: 105 SKQYQSPDKVVEALKGCGVSVS----NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHT 160
S + Q +VV ++ G++ S N+L++ LR + L + + G +
Sbjct: 60 SGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMAL-----LWKVREFMVGAGIS 114
Query: 161 PEMY--NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
P++Y +T+++ K ++F +++ EM E G ++ T + ++ L R G ++A
Sbjct: 115 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCG-LNTVTYNVLIAGLCRSGAVEEAFG 173
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGW 276
+ M+ YG+ D L++ L K A K L+ C L + + LI G+
Sbjct: 174 FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA-KALLDEMSCAELKPNVVVYANLIDGF 232
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ D+A K +KEM G P+ ++Y + C+ + LK+M +P
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 292
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
ITY +++ + +A ++ +M++ P+ YS +I L ++G + A+++ E+
Sbjct: 293 ITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 352
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M +G+ PN Y +IS C A ++ KM + PD Y L+ + R
Sbjct: 353 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 412
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ M + + + TY+ L+ G +++G LE A + M+ G+ P Y
Sbjct: 413 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 472
Query: 517 LEE 519
L E
Sbjct: 473 LLE 475
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 152/334 (45%), Gaps = 3/334 (0%)
Query: 187 MDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
+ E+ N +S + T S ++ L + G + A + M G++ + + L+ +
Sbjct: 315 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 374
Query: 245 GNSVEHAYKVFLEFKDCIPLSS-QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
+V A ++F + L +N LI G K +V+++ K +M ++G P+ +
Sbjct: 375 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 434
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y+ I Y + D + ++ M + G KP+ + Y ++ + K+ I + ++ M
Sbjct: 435 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 494
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
+ D Y LI LS +G ++ A + +++K G VP+V Y+++IS C ++ E
Sbjct: 495 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADRE 554
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A +L +M + P+ Y L+ C+ + + + + + TY SL+
Sbjct: 555 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 614
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
G + G + A + EM++ GI P Y +L
Sbjct: 615 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVL 648
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/351 (22%), Positives = 160/351 (45%), Gaps = 21/351 (5%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T S ++ ++ G + A + + M G++ + L+++ K + +E F
Sbjct: 434 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 493
Query: 259 KD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
D + L ++I+ ILIH + ++ A + + E+ + G PDV Y+ I C+ D
Sbjct: 494 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGLCKTADR 553
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
K L EM +KG P+++ Y ++ L K+ I+ A V+ + + +P+ Y+SL
Sbjct: 554 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 613
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I K G + +A ++ +M G+ P+ Y+ + + + + E A+ L+++M
Sbjct: 614 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR-G 672
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL----- 492
++ L+ C++ +M+ LL + + +A T +++ GL E+GKL
Sbjct: 673 HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHT 732
Query: 493 ---ELA-----------CSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNA 529
EL S F +MI++G +P M+ + ++ L A
Sbjct: 733 IFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKA 783
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/341 (23%), Positives = 134/341 (39%), Gaps = 55/341 (16%)
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWC 277
F+ M GV D R +L+ L ++E A++V +E +P +++ LI G C
Sbjct: 490 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVP-DVHVYSSLISGLC 548
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
KT + A + EM ++G P++V Y I+ C+ D + + KG P+ +
Sbjct: 549 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 608
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYT ++ K I+ A +Y +M + PD YS L S AG ++ A + E+M
Sbjct: 609 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 668
Query: 398 ----------------------------------KKQGVVPNVLTYNTMIS--SACARSE 421
+G+VPN LT +IS S +
Sbjct: 669 FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLS 728
Query: 422 EENAL--KLLQKMEEDLC--------------KPDCETYAPLLKMCCRKKRMKVLNFLLT 465
E + + +L QK E K + +++ C++ + L
Sbjct: 729 EVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRD 788
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
+ M +Y ++V L GKL A + +EM +G
Sbjct: 789 VIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRG 829
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/345 (19%), Positives = 129/345 (37%), Gaps = 56/345 (16%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G M +Y ++ L S + ++ E+++ N + S+++ L + +
Sbjct: 497 GVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEK-NGSVPDVHVYSSLISGLCKTADREK 555
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILI 273
A M K GV+ + + L+D L K + +A VF + K +P + + LI
Sbjct: 556 AFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP-NCVTYTSLI 614
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPD--------------------------------- 300
G CK + +A EM G +PD
Sbjct: 615 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 674
Query: 301 -VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+ S+ ++ +C+ ++ L + +G P+ +T ++ L +A +++E ++
Sbjct: 675 SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIF 734
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+++ +SSL F DM QG +P + + MI C
Sbjct: 735 VELQQKTSESAARHFSSL----------------FMDMINQGKIP-LDVVDDMIRDHCKE 777
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-KVLNFL 463
+ AL L + C +Y ++ CRK ++ + LN L
Sbjct: 778 GNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLL 822
>gi|242086476|ref|XP_002443663.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
gi|241944356|gb|EES17501.1| hypothetical protein SORBIDRAFT_08g023090 [Sorghum bicolor]
Length = 853
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 165/323 (51%), Gaps = 6/323 (1%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
+D T A GFF W K Q G+ H Y TM+ +LG++++F ++ +L+ EM + ++
Sbjct: 338 HDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHC-KPTVV 396
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + I+ R +AV+ F M++ G E D L+D K ++ A ++
Sbjct: 397 TYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRM 456
Query: 259 KDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
++ + LS F + +++ K ++ A K EM + G +P++V+Y I + ++
Sbjct: 457 QE-VGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARN 515
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ V K+MQ G +P ITY+IVM LG ++EA V+ +M+ D PD Y
Sbjct: 516 YENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEMRR-DWAPDEPVYGL 574
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ + KAG V A ++ M + G+ PNV T N+++S+ + ++A +LQ M
Sbjct: 575 LVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLAQG 634
Query: 437 CKPDCETYAPLLKMCCRKKRMKV 459
P +TY LL CC + + ++
Sbjct: 635 LVPSVQTYTLLLS-CCTEAQAQM 656
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 141/300 (47%), Gaps = 2/300 (0%)
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
L+ ++V + +L+ + + +I + R+ +K + EM + P V
Sbjct: 336 LLHDHTVALGFFQWLKRQPGFKHDGHTYTTMIGILGQARQFGVLKKLLDEMSRAHCKPTV 395
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
V+Y I Y R ++ +EMQE G +P +TY ++ KA ++ A+ +Y +
Sbjct: 396 VTYNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGR 455
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M+ PDT YS+++ L K G++ A ++F +M + G PN++TYN MI+
Sbjct: 456 MQEVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARN 515
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
EN +KL + M+ +PD TY+ ++++ + + M + D + D Y
Sbjct: 516 YENVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFIEM-RRDWAPDEPVYGL 574
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHST-YKMLEEKLEKKRLGNAKERINKLLAHA 540
LV ++G ++ A +++ M+ G+ P T +L L+ R +A + +LA
Sbjct: 575 LVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLAQG 634
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 123/251 (49%), Gaps = 5/251 (1%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N +IH + + + +A K +EM + G+ PD V+Y I+ + + D MQ
Sbjct: 398 YNRIIHAYGRANYLKEAVKVFEEMQEAGYEPDRVTYCTLIDIHAKAGYLDIAMDLYGRMQ 457
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E G P TY+ +++ LGK Q+ A K++ +M + C P+ Y+ +I + +KA +
Sbjct: 458 EVGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIENGCTPNLVTYNIMIALQAKARNYE 517
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMIS--SACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ ++++DM+ G P+ +TY+ ++ C +E A+ + +M D PD Y
Sbjct: 518 NVVKLYKDMQVAGFRPDKITYSIVMEVLGHCGHLDEAEAVFI--EMRRDWA-PDEPVYGL 574
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+ + + + M ++ + + T SL+ ++ + + A + M+++G
Sbjct: 575 LVDLWGKAGNVDKALGWYQAMLQDGLQPNVPTCNSLLSAFLKMNRFQDAYIVLQNMLAQG 634
Query: 507 IVPYHSTYKML 517
+VP TY +L
Sbjct: 635 LVPSVQTYTLL 645
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 157/302 (51%), Gaps = 1/302 (0%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRK 281
M G++ + + L+D ++ +E A+++ E C I + I+N L++G CK K
Sbjct: 302 MIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGK 361
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++ A + M+EM ++G PD +Y+ IE +CR ++ + + L EM+++ P+V+TY++
Sbjct: 362 MEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSV 421
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ L + + + +M + P+ Y++L+ +K GRV+++ I E M++QG
Sbjct: 422 IINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQG 481
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
++P+V YN++I C E A L +M E +P+ TY + + M++ +
Sbjct: 482 ILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIAD 541
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M V + G Y +L+ G + G + A S F ++S+ ++ TY +L L
Sbjct: 542 RYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGL 601
Query: 522 EK 523
+
Sbjct: 602 SR 603
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 174/369 (47%), Gaps = 8/369 (2%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
+ Y+ +++ + + +EL+ EM + L T S I+ L R G R
Sbjct: 382 QTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVL-TYSVIINGLCRCGNLQGTNAILR 440
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTR 280
M G++ + + LM K VE + + ++ L +N LI G+CK +
Sbjct: 441 EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAK 500
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++++A+ + EM ++ P+ +Y FI+ Y + + D EM G P+V YT
Sbjct: 501 RMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYT 560
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K + EA V+ + S L D YS LI LS+ G++ +A IF +++++
Sbjct: 561 ALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 620
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G++PN TYN++IS +C + + A +LL++M PD TY L+ C+ ++
Sbjct: 621 GLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERA 680
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML--- 517
L + ++ + TYA++V G +S A EEM+ +G+ P Y ++
Sbjct: 681 KNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNF 740
Query: 518 ---EEKLEK 523
EEK EK
Sbjct: 741 CCKEEKFEK 749
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 153/309 (49%), Gaps = 4/309 (1%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQI 268
G +A FR + V +D + SVL+ L + + A+ +F E K +P ++
Sbjct: 570 GNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLP-NAFT 628
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N LI G CK VD A + ++EM +G +PD+V+Y I+ C+ + + + +++
Sbjct: 629 YNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIE 688
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+G P+ +TY ++ K+K A ++ E+M PD Y+ ++ K + +
Sbjct: 689 GRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFE 748
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
A ++F++M ++G V ++NT+I C + + A LL++M E P+ TY L+
Sbjct: 749 KALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLI 807
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+ M L M + +V A TY SL+ G G + + FEEM++KGI
Sbjct: 808 DHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIE 867
Query: 509 PYHSTYKML 517
P TY ++
Sbjct: 868 PDKMTYYVM 876
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 152/314 (48%), Gaps = 12/314 (3%)
Query: 212 RYDDAVEAFR---GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQ 267
R D +AFR M G+E + + L++ + K +E A ++ E + + SQ
Sbjct: 323 RQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQ 382
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+++LI G C+ + + A + + EM ++ +P V++Y+ I CR + + + L+EM
Sbjct: 383 TYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREM 442
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
G KP+ + YT +M A K ++ E+ + E+M+ LPD Y+SLI KA R+
Sbjct: 443 VMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRM 502
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
++A +M ++ + PN TY I E E A + +M P+ Y L
Sbjct: 503 EEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTAL 562
Query: 448 LKMCCRKKRM----KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
++ C++ + V F+L+ DV TY+ L+ GL +GK+ A F E+
Sbjct: 563 IEGHCKEGNVTEAFSVFRFILSRRVLQDVQ----TYSVLIHGLSRNGKMHEAFGIFSELQ 618
Query: 504 SKGIVPYHSTYKML 517
KG++P TY L
Sbjct: 619 EKGLLPNAFTYNSL 632
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 162/366 (44%), Gaps = 36/366 (9%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FK 259
+T+M + GR +++ M++ G+ D + L+ K +E A +E +
Sbjct: 455 TTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLE 514
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ ++ + I G+ K +++ A + EM G P+V YT IE +C+E + +
Sbjct: 515 RRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTE 574
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ + + V TY++++H L + +++EA ++ +++ LP+ Y+SLI
Sbjct: 575 AFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLIS 634
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
K G V A+++ E+M +G+ P+++TYN +I C E E A L +E P
Sbjct: 635 GSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTP 694
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY-------------------- 479
+C TYA ++ C+ K LL M V DA Y
Sbjct: 695 NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLF 754
Query: 480 --------------ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY-KMLEEKLEKK 524
+L+ G +SGKL+ A EEMI K +P H TY +++ +
Sbjct: 755 QEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAG 814
Query: 525 RLGNAK 530
+G AK
Sbjct: 815 MMGEAK 820
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 177/389 (45%), Gaps = 55/389 (14%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
SL + ++++ L++G + + + F GM + V D + ++ K +V+ A +V
Sbjct: 188 SLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVL 247
Query: 256 LE-------FKDCIPLSSQI-----------FNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
LE + I L + ++ILI+G+C ++ +A+ + EM G
Sbjct: 248 LEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGL 307
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
P+ ++Y I+ + R+ D + EM G + ++I + +++ + KA ++ +AL+
Sbjct: 308 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 367
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ ++M PD+ YS LI + + A E+ ++MKK+ + P VLTY+ +I+ C
Sbjct: 368 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLC 427
Query: 418 -----------ARSEEENALK------------------------LLQKMEEDLCKPDCE 442
R N LK +L++M E PD
Sbjct: 428 RCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVF 487
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y L+ C+ KRM+ L M + + +A TY + + G ++G++E+A +F EM
Sbjct: 488 CYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEM 547
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
+S G++P Y L E K+ GN E
Sbjct: 548 LSCGVLPNVGIYTALIEGHCKE--GNVTE 574
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 157/336 (46%), Gaps = 18/336 (5%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
NG + +M + G +AV F G K + + + L+ L+KGN VE
Sbjct: 149 NGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELF 208
Query: 252 YKVF------------LEFKDCIPLSSQIFNI------LIHGWCKTRKVDDAQKAMKEMF 293
+KVF + + I ++ N+ L+ K R +D+A + + M
Sbjct: 209 WKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMV 268
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
+G PD+ +Y I +C EK R+ L EM + G KP ITY ++ + I
Sbjct: 269 DKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIE 328
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
+A ++ ++M + + +++L+ + KAG+++ A EI ++M ++GV P+ TY+ +I
Sbjct: 329 QAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLI 388
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C A +LL +M++ P TY+ ++ CR ++ N +L M N +
Sbjct: 389 EGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLK 448
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+A Y +L+ + G++E + E M +GI+P
Sbjct: 449 PNAVVYTTLMTAHAKEGRVEESRMILERMREQGILP 484
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 167/375 (44%), Gaps = 53/375 (14%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGV----SVSNSLVEQTLRRFSNDLTPAFGFFTWAK 152
+D SK + + + D+ + CGV + +L+E + ++T AF F +
Sbjct: 528 IDGYSK--AGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKE--GNVTEAFSVFRFIL 583
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE---LNNGYVSLATMSTIMRRLVR 209
++ + + Y+ ++ L ++ K + + E+ E L N + T ++++ +
Sbjct: 584 SRR-VLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAF----TYNSLISGSCK 638
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCI- 262
G D A + M G+ D ++L+D L K +E A +F + + +C+
Sbjct: 639 QGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVT 698
Query: 263 -----------------------------PLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
P + I+N++++ CK K + A +EM
Sbjct: 699 YAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEML 758
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
++GF+ VS+ IE YC+ ++ + L+EM EK P+ +TYT ++ KA +
Sbjct: 759 EKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMG 817
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EA +++ +M+ + +P Y+SL+ G + + + +FE+M +G+ P+ +TY MI
Sbjct: 818 EAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMI 877
Query: 414 SSACARSEEENALKL 428
+ C A KL
Sbjct: 878 DAYCREGNVMEACKL 892
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%)
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQ 286
GV D +V+++ K E A +F E + S+ FN LI G+CK+ K+ +A
Sbjct: 726 GVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEAN 785
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
++EM ++ F P+ V+YT I+H C+ + EMQE+ P+ TYT ++H
Sbjct: 786 HLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGY 845
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++E ++E+M + PD Y +I + G V +A ++ +++ +G+
Sbjct: 846 HNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGM 901
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 205/455 (45%), Gaps = 63/455 (13%)
Query: 119 KGCGVSVSN-SLVEQTL---------RRFSNDLTPAFGFFTWAKTQTGYMHTPEM--YNT 166
+GC + V N +LV Q + R DL P+FG P++ YN
Sbjct: 175 RGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGC------------EPDVVSYNA 222
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
++ L ++++ + +L++EM ++ T ST++ L R G ++ E M ++
Sbjct: 223 VLRGLCMARRWGHVQDLMEEMVAAGC-PPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEH 281
Query: 227 GVEKDTRALSVLMD-------------------------------TLVKG----NSVEHA 251
G D R + ++D TL+KG + E A
Sbjct: 282 GCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEA 341
Query: 252 YKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+ E KDC PL FNIL+ C+ VD + +++M + G PDV++YT I
Sbjct: 342 EGLLAEMFDKDC-PLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVIN 400
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
+C+E + L+ M GC+P+ ++YTIV+ L A++ +A ++ +M C P
Sbjct: 401 GFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPP 460
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ +++LI L K G V+ A E+ + M G P++++Y+T+I + AL+LL
Sbjct: 461 NPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELL 520
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
M + P+ Y+ + + R+ + + ++ V DA Y +++ L +
Sbjct: 521 NVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKR 580
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
G+ + A F M+S G VP STY +L L +
Sbjct: 581 GETDRAIEFLAYMVSSGCVPNESTYTILIRGLASE 615
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 168/378 (44%), Gaps = 9/378 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN MV ++ + L + N Y T ++R L GR DA+ M
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASVPVAPNAY----TYFPLVRALCARGRIADALAVLDDM 137
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ G V ++ + + A V L + C L N+++ C
Sbjct: 138 ARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCA-LDVGNCNLVLQAVCDQGP 196
Query: 282 VDDAQKAMKEMFQQ-GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
VD+A + ++++ G PDVVSY + C + + V D ++EM GC P+++T++
Sbjct: 197 VDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFS 256
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L + +V+ +M C PD Y+++I + K R++ A I M
Sbjct: 257 TLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSY 316
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ PNV+ YNT++ C+ E A LL +M + C D T+ L+ C+ + +
Sbjct: 317 GLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRV 376
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+L M ++ D TY +++ G + G ++ A M + G P +Y ++ +
Sbjct: 377 IEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKG 436
Query: 521 L-EKKRLGNAKERINKLL 537
L +R +A+E +++++
Sbjct: 437 LCSAERWVDAEELMSQMI 454
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/239 (20%), Positives = 99/239 (41%), Gaps = 5/239 (2%)
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y + YCR + P+ TY ++ AL +I +AL V + M
Sbjct: 82 YNAMVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDMA 138
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
C P Y + +A + A + D+ +G +V N ++ + C + +
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198
Query: 424 NALKLLQKMEEDL-CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
A++LL+ + C+PD +Y +L+ C +R + L+ M + T+++L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKLLAHA 540
+ L +G E +M G P Y +++ +++RL A+ +N++ ++
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYG 317
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 148 bits (373), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 175/372 (47%), Gaps = 36/372 (9%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
+ T++ L + G A+E R V+ D + ++D + K V A+ ++ E
Sbjct: 299 VSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSE 358
Query: 258 -------------------------FKDCIPLSSQI-----------FNILIHGWCKTRK 281
KD I L +++ F+IL+ G+CK
Sbjct: 359 KVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGN 418
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A+ + M +Q PDVV+Y+ ++ YC + K + M +G +V +Y I
Sbjct: 419 IKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNI 478
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ K K ++EA+K++++M PD YSSLI L K+GR+ A E+ ++M +G
Sbjct: 479 MINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRG 538
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+++TYN+++ + C + + A+ LL K++ +PD TY L+K C+ +++
Sbjct: 539 QQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDAR 598
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ + ++D Y +++G + G + A + +M G +P TY+++ L
Sbjct: 599 KVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSL 658
Query: 522 EKKRLGNAKERI 533
+K + E++
Sbjct: 659 FEKDENDMAEKL 670
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 142/278 (51%), Gaps = 6/278 (2%)
Query: 177 FCLMWELVKEMDELN-----NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
FC++ +L +D N N + T S ++ + G +A M K ++ D
Sbjct: 378 FCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPD 437
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
S LMD N V A +F + + Q +NI+I+G+CK + VD+A K K
Sbjct: 438 VVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFK 497
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
EM + PDV++Y+ I+ C+ + + EM +G +P +ITY ++ AL K
Sbjct: 498 EMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKH 557
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
+++A+ + K+K PD + Y+ L+ L ++G+++DA ++FED+ +G +V Y
Sbjct: 558 HVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYT 617
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
MI C + + AL LL KMEE+ C PD +TY ++
Sbjct: 618 VMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIII 655
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 160/347 (46%), Gaps = 2/347 (0%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
MYNT++D + K K ++L E + + T + ++ G+ DA++ F
Sbjct: 335 MYNTIIDGMCKDKHVNDAFDLYSEKVS-KRIFPDVFTYNALISGFCIVGKLKDAIDLFNK 393
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRK 281
M + D S+L+D K +++ A V + K I ++ L+ G+C +
Sbjct: 394 MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNE 453
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V+ A+ M +G + +V SY I +C+ K + KEM K P VITY+
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K+ +I+ AL++ ++M PD Y+S++ L K V A + +K QG
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P++ TY ++ C + E+A K+ + + D Y +++ C K
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
LL+ M +N DA TY ++ L E + ++A EMI +G++
Sbjct: 634 ALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGLL 680
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 126/274 (45%), Gaps = 3/274 (1%)
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
I G+C ++ A ++ GF D VSY I C+ + + + L+ K
Sbjct: 269 FIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKL 328
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+P V+ Y ++ + K K +N+A +Y + S PD Y++LI G++KDA
Sbjct: 329 VQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAI 388
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++F M + ++P+V T++ ++ C + A +L M + KPD TY+ L+
Sbjct: 389 DLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGY 448
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C + + M V+ + +Y ++ G + ++ A F+EM K I P
Sbjct: 449 CLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDV 508
Query: 512 STYKMLEEKLEKK-RLGNAKERINKLLAHAKEQK 544
TY L + L K R+ A E ++++ H + Q+
Sbjct: 509 ITYSSLIDGLCKSGRISYALELVDEM--HYRGQQ 540
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 117/251 (46%)
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
++ + G+ PD ++ T FI+ +C + + ++ G ++Y +++ L K
Sbjct: 253 KILKNGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVG 312
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
+ AL++ + PD Y+++I + K V DA +++ + + + P+V TYN
Sbjct: 313 ETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYN 372
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+IS C + ++A+ L KM PD T++ L+ C+ +K +L M K
Sbjct: 373 ALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQ 432
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
+ D TY+SL+ G ++ A S F M +G+ +Y ++ K ++ +
Sbjct: 433 SIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEA 492
Query: 531 ERINKLLAHAK 541
++ K + H +
Sbjct: 493 MKLFKEMHHKQ 503
>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Vitis vinifera]
Length = 347
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 140/266 (52%), Gaps = 2/266 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N LI G CK + A++ M EM +G P+V++YT I+ +C+E + + L EM
Sbjct: 17 YNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMS 76
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
KG + + Y ++ AL K +++ +AL ++ M S C PD ++SLIF L K + +
Sbjct: 77 GKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFE 136
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A +++DM +GV+ N +TYNT+I + R + ALKL+ M C D TY L+
Sbjct: 137 EALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLI 196
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
K CR ++ L M ++ + + L+ GL +G ++ A F +MI +G+
Sbjct: 197 KALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLT 256
Query: 509 PYHSTYKMLEEKLEKKRLGNAKERIN 534
P TY L L K G A+E +N
Sbjct: 257 PDIVTYNSLINGLCKT--GRAQEALN 280
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 146/327 (44%), Gaps = 1/327 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ L + G A E M+ G E + ++L+D K +E A V E
Sbjct: 16 TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 75
Query: 259 KD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ L++ +N LI CK KV DA +M +G PD+ ++ I C+ F
Sbjct: 76 SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKF 135
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ ++M +G + ITY ++HA + + EALK+ M C D Y+ L
Sbjct: 136 EEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGL 195
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L +AG ++ +FEDM +G+ PN ++ N +I+ C ++AL+ L+ M
Sbjct: 196 IKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGL 255
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD TY L+ C+ R + L + + DA TY +L+ + G + A
Sbjct: 256 TPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHL 315
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ G +P T+ +L K+
Sbjct: 316 LLSRGVDSGFIPNEVTWYILVSNFIKE 342
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 153/333 (45%), Gaps = 4/333 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ L K EL+ EM ++ ++ T + ++ R + GR ++A M
Sbjct: 17 YNTLILGLCKKGYLVSARELMNEM-QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 75
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G+ + + L+ L K V+ A +F + K C P FN LI G CK K
Sbjct: 76 SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP-DIFTFNSLIFGLCKVNK 134
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++A ++M +G + ++Y I + R ++ + +M +GC ITY
Sbjct: 135 FEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNG 194
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ AL +A I + L ++E M S P+ + LI L + G ++ A E DM +G
Sbjct: 195 LIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRG 254
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+++TYN++I+ C + AL L K++ + PD TY L+ C++ +
Sbjct: 255 LTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAH 314
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
LL+ + + T+ LV I+ G E
Sbjct: 315 LLLSRGVDSGFIPNEVTWYILVSNFIKEGDQEF 347
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 1/181 (0%)
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
++E M S C PD Y++LI L K G + A E+ +M+ +G PNV+TY +I C
Sbjct: 1 MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E A +L +M + Y L+ C+ ++++ + M D
Sbjct: 61 KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKL 536
T+ SL+ GL + K E A +++M+ +G++ TY ++ L + + A + +N +
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDM 180
Query: 537 L 537
L
Sbjct: 181 L 181
>gi|449440748|ref|XP_004138146.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18900-like [Cucumis sativus]
Length = 874
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 180/373 (48%), Gaps = 7/373 (1%)
Query: 92 NHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWA 151
N V+ +S IL + P EA+ S+ Q L+R +D A GFF W
Sbjct: 312 NAPNVVESVSCILQQLKWGP-AAEEAIGKLNCSIDAYQANQILKRV-DDHAVALGFFYWL 369
Query: 152 KTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRG 210
K + H Y TM+ +LG++K+F + +L+ +M + +G ++ T + I+ R
Sbjct: 370 KRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQM--IKDGCQPNVVTYNRIIHSYGRA 427
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIF 269
DAV F+ M++ G E D L+D K ++ A ++ + +D + + +
Sbjct: 428 NYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTY 487
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+++I+ K ++ A + M +G P++V+Y I + +++ ++MQ+
Sbjct: 488 SVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQ 547
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
G +P +TY IVM LG + EA ++ +M+ + +PD Y L+ + K+G V+
Sbjct: 548 SGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQK 607
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A E + M K G+ PNV T N+++S+ + +A +LLQ M KP +TY LL
Sbjct: 608 AWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTFGLKPSLQTYTLLLS 667
Query: 450 MCCRKKRMKVLNF 462
CC + + F
Sbjct: 668 -CCTDAQTNDMGF 679
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 129/261 (49%), Gaps = 1/261 (0%)
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ ++ K + +M + G P+VV+Y I Y R + + K+MQE GC+P +
Sbjct: 391 RAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRV 450
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++ K+ ++ A+ +YEKM+ PDT YS +I L KAG + A+ +F M
Sbjct: 451 TYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRM 510
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+G VPN++TYN MI+ E ALKL + M++ +PD TY ++++ +
Sbjct: 511 VDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFL 570
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST-YKM 516
+ + M K + D Y LV +SG ++ A ++ M+ G+ P T +
Sbjct: 571 EEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSL 630
Query: 517 LEEKLEKKRLGNAKERINKLL 537
L L +L +A + + +L
Sbjct: 631 LSAFLRVHQLSDAYQLLQSML 651
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 120/242 (49%), Gaps = 4/242 (1%)
Query: 280 RKVDDAQKAMKEMFQ----QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
++VDD A+ + F D +YT I R K F ++ L +M + GC+P+
Sbjct: 354 KRVDDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPN 413
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+TY ++H+ G+A + +A+ V+++M+ C PD Y +LI I +K+G + A ++E
Sbjct: 414 VVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYE 473
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M+ G+ P+ TY+ MI+ A +L +M ++ C P+ TY ++ + + +
Sbjct: 474 KMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKAR 533
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
++ L M ++ D TY ++ L G LE A F EM K VP Y
Sbjct: 534 NYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYG 593
Query: 516 ML 517
+L
Sbjct: 594 LL 595
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 17/229 (7%)
Query: 305 TCFIEHYCREKDFRKVDD------------TLKEMQEKGCKPSVITYTIVMHALGKAKQI 352
C I+ Y + ++VDD L + G TYT ++ LG+AKQ
Sbjct: 341 NCSIDAYQANQILKRVDDHAVALGFFYWLKRLPRFRHDG-----HTYTTMIGLLGRAKQF 395
Query: 353 NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
K+ ++M D C P+ Y+ +I +A ++DA +F+ M++ G P+ +TY T+
Sbjct: 396 AAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTL 455
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
I + A+ + +KM++ PD TY+ ++ + + + L M
Sbjct: 456 IDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGC 515
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ TY ++ ++ E+A + +M G P TY ++ E L
Sbjct: 516 VPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVL 564
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 117/287 (40%), Gaps = 42/287 (14%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
TP+ Y+ M++ LGK+ L M ++ G V +L T + ++ + Y+ A
Sbjct: 481 TPDTFTYSVMINCLGKAGHLNAAHRLFCRM--VDEGCVPNLVTYNIMIALQAKARNYEIA 538
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIH 274
++ +R M++ G E D ++M+ L +E A +F+E K+ +P ++ +L+
Sbjct: 539 LKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVP-DEPVYGLLVD 597
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
W K+ V A + M + G P+V + + + R L+ M G KP
Sbjct: 598 LWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTFGLKP 657
Query: 335 SVITYTIVMHALGKAKQINEAL----------------------------------KVYE 360
S+ TYT+++ A+ + K +
Sbjct: 658 SLQTYTLLLSCCTDAQTNDMGFCCELMQVTGHPAHTFLVSLPSAGPNGQNVRDHMSKFLD 717
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
M S+D +++ L K+G ++A ++E ++ V P+ +
Sbjct: 718 LMHSEDRESKRGLVDAVVDFLHKSGLKEEAGCVWEAAMQKNVYPDAV 764
>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 180/373 (48%), Gaps = 7/373 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G H YN +++ L + +F + +V +M + GY + T+S+++ +G R
Sbjct: 99 GIGHDLYTYNIVINCLCRCSRFVIALSVVGKM--MKFGYEPDVVTVSSLINGFCQGNRVF 156
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILI 273
AV+ M++ + D + ++D K V +A +F +D + + +N L+
Sbjct: 157 GAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLV 216
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G C + + DA + M++M + P+V+++T I + RE F + +EM +
Sbjct: 217 TGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCID 276
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P V TY ++H L Q++EA ++ + M + C PD Y++LI K RV + ++
Sbjct: 277 PDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKL 336
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+M ++G+V + +T+NT+I + A ++ +M +P+ TY+ LL C
Sbjct: 337 VREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGS---RPNIRTYSILLYGLCY 393
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
R++ L M K+++ +D TY ++ G+ G +E A F + KG+ P T
Sbjct: 394 NWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVT 453
Query: 514 YKMLEEKLEKKRL 526
Y + +KRL
Sbjct: 454 YTTMISGFCRKRL 466
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 148/340 (43%), Gaps = 39/340 (11%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNIL 272
D+A++ F M + S L+ + K + + +F + C I +NI+
Sbjct: 51 DEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIV 110
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I+ C+ + A + +M + G+ PDVV+ + I +C+ D + +M+E C
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMRC 170
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
K V+ Y ++ K +N AL ++ +M+ D DT Y+SL+ L +GR DA
Sbjct: 171 KLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAAR 230
Query: 393 IFEDMKKQGVVPNVLT-----------------------------------YNTMISSAC 417
+ DM + +VPNV+T YN+MI C
Sbjct: 231 LMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLC 290
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
+ + A ++L M C PD TY L+ C+ KR+ L+ M + + +D
Sbjct: 291 MHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTV 350
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
T+ ++++G ++G+ + A F M S+ P TY +L
Sbjct: 351 TFNTIIQGYFQAGRPDAAQEIFSRMGSR---PNIRTYSIL 387
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 140/306 (45%), Gaps = 5/306 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YNT++D K+ L M E + T ++++ L GR DA R
Sbjct: 176 IYNTIIDGFCKTGLVNNALVLFGRM-ERDGVRADTVTYNSLVTGLCCSGRRSDAARLMRD 234
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M + + + L++ V+ A K + E + CI +N +IHG C +
Sbjct: 235 MVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQ 294
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD+A++ + M +G PDVV+Y I +C+ K + ++EM ++G +T+
Sbjct: 295 VDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNT 354
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ +A + + A +++ +M S P+ YS L++ L RV+ A +FE M+K
Sbjct: 355 IIQGYFQAGRPDAAQEIFSRMGSR---PNIRTYSILLYGLCYNWRVEKALVLFESMQKSE 411
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ ++ TYN +I C E+A L + +PD TY ++ CRK+ +
Sbjct: 412 MELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKAD 471
Query: 462 FLLTHM 467
FL M
Sbjct: 472 FLYRKM 477
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 147/278 (52%), Gaps = 7/278 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN++V L S + L+++M + + ++ T + ++ VR G++ +A + + M
Sbjct: 212 YNSLVTGLCCSGRRSDAARLMRDM-VMRDIVPNVITFTALINAFVREGKFLEAKKFYEEM 270
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ ++ D + ++ L V+ A ++ + K C P +N LI+G+CKT++
Sbjct: 271 IRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFP-DVVTYNTLINGFCKTKR 329
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD+ K ++EM Q+G D V++ I+ Y + + D + G +P++ TY+I
Sbjct: 330 VDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAG---RPDAAQEIFSRMGSRPNIRTYSI 386
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ L ++ +AL ++E M+ + D + Y+ +I + G V+DA ++F + +G
Sbjct: 387 LLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKG 446
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+ P+V+TY TMIS C + + A L +KM+ED P
Sbjct: 447 LEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 122/272 (44%), Gaps = 1/272 (0%)
Query: 247 SVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
+++ A +F PL S + F+ L+ K++ D M G D+ +Y
Sbjct: 49 NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I CR F + +M + G +P V+T + +++ + ++ A+ + KM+
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
C D Y+++I K G V +A +F M++ GV + +TYN++++ C +A
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
+L++ M P+ T+ L+ R+ + M + + D TY S++ G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHG 288
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L G+++ A + M++KG P TY L
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFPDVVTYNTL 320
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 148 bits (373), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/356 (29%), Positives = 173/356 (48%), Gaps = 30/356 (8%)
Query: 188 DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS 247
D L GY +M L R G+ D+A R M + K +VL +TL+ G
Sbjct: 304 DALIQGY--------LMHGLCRMGKVDEA----RAM----LSKIPNPNTVLYNTLINGYV 347
Query: 248 VEHAYKVFLEFKDCIPLSSQI---------FNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
V ++ E KD + + I FNI+I G CK + A + + EM ++GF
Sbjct: 348 VSGRFE---EAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFE 404
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P+V++YT I+ +C++ F + + M KG + + Y ++ AL K +I +AL++
Sbjct: 405 PNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQM 464
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
Y +M S C PD ++SLI+ L K ++++A ++ DM +GV+ N +TYNT+I +
Sbjct: 465 YGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLR 524
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ A KL+ +M C D TY L+K C+ + L+ MF ++ +
Sbjct: 525 LELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINS 584
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
L+ +GK+ A F +MI +G+ P TY L L K +G +E +N
Sbjct: 585 CNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCK--MGRFQEALN 638
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 155/319 (48%), Gaps = 2/319 (0%)
Query: 201 STIMRRLVRGGRYDDAVEA-FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF- 258
+T++ V GR+++A + ++ M G E D ++++D L K + A + E
Sbjct: 340 NTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMV 399
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K + + ILI G+CK ++A K + M +G S + V Y C I C++ +
Sbjct: 400 KKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQ 459
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
EM KGCKP + T+ +++ L K ++ EAL +Y M + + +T Y++LI
Sbjct: 460 DALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLI 519
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ ++ A+++ +M+ +G + +TYN +I + C E L L+++M +
Sbjct: 520 HAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF 579
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P + L+ CR ++ L M + ++ D TY SL+ GL + G+ + A +
Sbjct: 580 PSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNL 639
Query: 499 FEEMISKGIVPYHSTYKML 517
F + +KGI P TY L
Sbjct: 640 FNGLQAKGIHPDAVTYNTL 658
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 190/413 (46%), Gaps = 37/413 (8%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
D+ + F A Q GY+H+ +Y ++D LG +F ++ +L+K+M + G V +
Sbjct: 73 DVPTSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKD--EGCVFKES 130
Query: 200 MST-IMRRLVRGGRYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
+ IMR + G A M Y E ++ +V+++ LV GN + A VF +
Sbjct: 131 LFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYD 190
Query: 258 -FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
I + F +++ +C +VD A +++M + G P+ + Y I
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK----SDDCL---- 368
+ L+EM GC+P V T+ V+H L KA +I+EA K++++M + D L
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310
Query: 369 -----------------------PDTSFYSSLIFILSKAGRVKDANE-IFEDMKKQGVVP 404
P+T Y++LI +GR ++A + ++++M G P
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEP 370
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+ T+N MI C + +AL+ L +M + +P+ TY L+ C++ + + ++
Sbjct: 371 DAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVV 430
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M +S++ Y L+ L + GK++ A + EM SKG P T+ L
Sbjct: 431 NSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSL 483
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 158/356 (44%), Gaps = 1/356 (0%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YNT+++ S +F +L+ + + T + ++ L + G A+E
Sbjct: 338 LYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDE 397
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRK 281
M K G E + ++L+D K E A KV + L++ +N LI CK K
Sbjct: 398 MVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGK 457
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ DA + EM +G PD+ ++ I C+ + ++M +G + +TY
Sbjct: 458 IQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNT 517
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++HA + + I +A K+ +M+ C D Y+ LI L K G + + E M +
Sbjct: 518 LIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEE 577
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P++ + N +I+S C + +AL+ L+ M + PD TY L+ C+ R +
Sbjct: 578 IFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEAL 637
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + + DA TY +L+ G AC + +S G +P T+ +L
Sbjct: 638 NLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSIL 693
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 118/253 (46%), Gaps = 4/253 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++ L K K ++ EM + T ++++ L + + ++A+ +R M
Sbjct: 445 YNCLIGALCKDGKIQDALQMYGEMSS-KGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDM 503
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
GV +T + L+ ++ ++ A K+ + F+ C PL + +N LI CKT
Sbjct: 504 LLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGC-PLDNITYNGLIKALCKTGA 562
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +++MF + P + S I +CR L++M ++G P ++TY
Sbjct: 563 TEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNS 622
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ L K + EAL ++ +++ PD Y++LI G DA ++ G
Sbjct: 623 LINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNG 682
Query: 402 VVPNVLTYNTMIS 414
+PN +T++ +I+
Sbjct: 683 FIPNEITWSILIN 695
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 69/171 (40%), Gaps = 2/171 (1%)
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y LI L G K +++ + MK +G V + ++ A +LL M
Sbjct: 97 YYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMW 156
Query: 434 EDLC-KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
C +P ++Y +L++ KV + M +S T+ +++ ++
Sbjct: 157 GVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEV 216
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAKE 542
+ ACS +M G VP Y+ML L E R+ A + + ++ E
Sbjct: 217 DSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCE 267
>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 176/388 (45%), Gaps = 11/388 (2%)
Query: 145 FGFFTWAK-TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN---NGYVSLATM 200
GF AK + G T + T+++ LGK KF EL +M + Y T
Sbjct: 28 LGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDY----TY 83
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEF 258
+TI+ L + G A F+ M++ G + + S L+ +L K V A +F ++
Sbjct: 84 TTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKA 143
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
KD P + + LI G C + +A + EM P+VV++ ++ +C+E
Sbjct: 144 KDISP-TIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVL 202
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ LK M E G +P V+TY +M+ ++ EA K+++ M + C PD YS LI
Sbjct: 203 AAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILI 262
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
KA R+ +A ++F +M QG PN ++YNT+I C A L + M +
Sbjct: 263 NGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNL 322
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P+ TYA LL C++ + L M + + Y LV + +SG L+ A
Sbjct: 323 PNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDAREL 382
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKRL 526
F E+ G+ P Y + L K+ L
Sbjct: 383 FSELFVIGLQPNVQIYTTIINGLCKEGL 410
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 174/355 (49%), Gaps = 2/355 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+++ L K + L L K+M+E +++ T ST++ L + R ++A++ F M
Sbjct: 83 YTTIINGLCKIGETALAAGLFKKMEEAG-CQLNVVTYSTLIHSLCKYRRVNEALDIFSYM 141
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
K + + L+ L + + A + E + + + FN+L+ +CK KV
Sbjct: 142 KAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKV 201
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A+ +K M + G PDVV+Y + Y + + M KGCKP V +Y+I+
Sbjct: 202 LAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSIL 261
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ KAK+I+EA +++ +M P+ Y++LI L + GR+++A ++F++M G
Sbjct: 262 INGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGN 321
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+PN+ TY ++ C + A +L + M+ KP+ Y L+ C+ +K
Sbjct: 322 LPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARE 381
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + +F + + Y +++ GL + G L+ A F M G P +Y ++
Sbjct: 382 LFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVI 436
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/300 (29%), Positives = 147/300 (49%), Gaps = 4/300 (1%)
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
L+ EM LN ++ T + ++ + G+ A + M + GVE D + LM
Sbjct: 172 LLNEMTSLNI-MPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGY 230
Query: 243 VKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
V A K+F + K C P ++ILI+G+CK +++D+A++ EM QG +P+
Sbjct: 231 SMWTEVVEARKLFDVMITKGCKP-DVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPN 289
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
VSY I C+ R+ D K M G P++ TY I++ K + +A +++
Sbjct: 290 NVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFR 349
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
M+S P+ Y+ L+ + K+G +KDA E+F ++ G+ PNV Y T+I+ C
Sbjct: 350 AMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEG 409
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+ AL+ + ME+D C PD +Y +++ + K L+ M DAGT A
Sbjct: 410 LLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGTTA 469
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 161/344 (46%), Gaps = 37/344 (10%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M+ G+ +T L++L++ + V+ + V + K + + F LI+G K K
Sbjct: 1 MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
A + +M +G PD +YT I C+ + K+M+E GC+ +V+TY+
Sbjct: 61 FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H+L K +++NEAL ++ MK+ D P Y+SLI L R K+A+ + +M
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180
Query: 402 VVPNVLTYNTMISSACARSE---EENALKLLQKM--EEDL-------------------- 436
++PNV+T+N ++ + C + E LK + +M E D+
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240
Query: 437 ----------CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
CKPD +Y+ L+ C+ KR+ L M + + +Y +L+ GL
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR-LGNA 529
+ G+L A F+ M + G +P TY +L + K+ LG A
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKA 344
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 134/270 (49%), Gaps = 1/270 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
NILI+ +C+ ++VD + + + G P +V++T I + F + + +M
Sbjct: 13 LNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMV 72
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+GC+P TYT +++ L K + A +++KM+ C + YS+LI L K RV
Sbjct: 73 ARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVN 132
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A +IF MK + + P + TY ++I C S + A LL +M P+ T+ L+
Sbjct: 133 EALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLV 192
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C++ ++ +L M + V D TY SL+ G ++ A F+ MI+KG
Sbjct: 193 DTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCK 252
Query: 509 PYHSTYKMLEEKLEK-KRLGNAKERINKLL 537
P +Y +L K KR+ AK+ N+++
Sbjct: 253 PDVFSYSILINGYCKAKRIDEAKQLFNEMI 282
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 175/365 (47%), Gaps = 2/365 (0%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YNT++D L K K ++L +M E + T ++++ L GR+ DA
Sbjct: 258 IYNTIIDGLCKYKHMDDAFDLFNKM-ETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSD 316
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M + + + + L+D K + A K+F E + I + +N LI+G+C +
Sbjct: 317 MIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDR 376
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+AQ+ M + PDVV+Y I+ +C+ K + + +EM ++G + +TY
Sbjct: 377 LDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 436
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L +A + A K+++KM SD PD YS L+ L K G+++ A +FE ++K
Sbjct: 437 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 496
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PN+ TYN MI C + E+ L + KP+ Y ++ CRK + +
Sbjct: 497 MEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 556
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M ++ D+G Y +L+R + G + +EM S G V ST M+ L
Sbjct: 557 ALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616
Query: 522 EKKRL 526
RL
Sbjct: 617 HDGRL 621
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 96/371 (25%), Positives = 181/371 (48%), Gaps = 6/371 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G H Y+ +++ + + L ++ +M +L GY + T+S+++ G R
Sbjct: 111 GIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKL--GYEPDIVTLSSLLNGYCHGKRIS 168
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
+AV M + G + DT + L+ L N A + + + C P + +
Sbjct: 169 EAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQP-DLFTYGTV 227
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
++G CK +D A +K+M + +VV Y I+ C+ K D +M+ KG
Sbjct: 228 VNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGI 287
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
KP V TY ++ L + ++A ++ M P+ ++SLI +K G++ +A +
Sbjct: 288 KPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEK 347
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+F++M ++ + PN++TYN++I+ C + A ++ M C PD TY L+K C
Sbjct: 348 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFC 407
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ KR++ L M + + + TY +L++GL ++G ++A F++M+S G+ P
Sbjct: 408 KAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDII 467
Query: 513 TYKMLEEKLEK 523
TY +L + L K
Sbjct: 468 TYSILLDGLCK 478
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 152/317 (47%), Gaps = 5/317 (1%)
Query: 206 RLVRGG----RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
+L R G + DDAV F M K S L+ + K N + + + ++
Sbjct: 51 KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110
Query: 262 -IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
IP + ++IL++ +C+ ++ A + +M + G+ PD+V+ + + YC K +
Sbjct: 111 GIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 170
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+ +M E G KP +T+ ++H L + +EA+ + ++M + C PD Y +++
Sbjct: 171 VALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 230
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K G + A + + M+K + NV+ YNT+I C ++A L KME KPD
Sbjct: 231 LCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 290
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ C R + LL+ M + ++ + T+ SL+ + GKL A F+
Sbjct: 291 VFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 350
Query: 501 EMISKGIVPYHSTYKML 517
EMI + I P TY L
Sbjct: 351 EMIQRSIDPNIVTYNSL 367
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 114/234 (48%), Gaps = 1/234 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T +T+++ + R ++ +E FR M + G+ +T + L+ L + + A K+F
Sbjct: 396 VVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFK 455
Query: 257 EF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ D +P ++IL+ G CK K++ A + + + P++ +Y IE C+
Sbjct: 456 KMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAG 515
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
D + KG KP+VI YT ++ + EA ++ +MK D LPD+ Y+
Sbjct: 516 KVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYN 575
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+LI + G + E+ ++M+ G V + T + +I+ E++ L++L
Sbjct: 576 TLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLEML 629
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%)
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++++A+ ++ +M P +S L+ ++K + + E M+ G+ N TY+
Sbjct: 61 KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+++ C RS+ AL +L KM + +PD T + LL C KR+ L+ M +
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
D T+ +L+ GL K A + + M+++G P TY + L K+
Sbjct: 181 GYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKR 234
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 200/420 (47%), Gaps = 15/420 (3%)
Query: 106 KQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT-QTGYMHTPEMY 164
K Y S + ++ GVS S + + + GF K + G+ + +
Sbjct: 118 KHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITF 177
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELN----NGY-VSLATMSTIMRRLVRGGRYDDAVEA 219
NT+++ L C+ +V+ M++L+ GY ++ T + I+ L + G+ A+
Sbjct: 178 NTLINGL------CIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVW 231
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWC 277
+ M + E + + S+++D+L K V A +F + I +S + +N LI+G C
Sbjct: 232 MKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRS-IGISPTVVTYNSLIYGMC 290
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ + A KEM + PDVV+++ ++ C+E + +M + +P ++
Sbjct: 291 NSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIV 350
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY+ ++H + K+ E+ + +M S + PD +S + + K G V +A I M
Sbjct: 351 TYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLM 410
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
++G+ PNV+TYN+++ C S+ + A K+ M C PD +Y L+K C+ +R+
Sbjct: 411 IERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERI 470
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M ++ ++ T+ +L+ GL ++G+ A F++M S G P TY L
Sbjct: 471 DEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTL 530
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 176/359 (49%), Gaps = 6/359 (1%)
Query: 148 FTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMR 205
W K PE+ Y+ ++D L K++ +L M + ++ T ++++
Sbjct: 229 IVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGIS-PTVVTYNSLIY 287
Query: 206 RLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS 265
+ G++ A F+ M ++ ++ D S+L+D L K V A VF + I +
Sbjct: 288 GMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQ-IAME 346
Query: 266 SQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
I ++ LIHG CK+ ++ + EM + PDVV+++ +++ +C++ +
Sbjct: 347 PDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSI 406
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+ M E+G +P+V+TY +M Q++EA KV++ M + C PD Y+ LI K
Sbjct: 407 INLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCK 466
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
+ R+ +A ++F++M +G+ PN +T+ T+IS C A +L +KM C PD T
Sbjct: 467 SERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLIT 526
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y+ LL C+ + L + K+ + + L+ G+ ++GKLE A F +
Sbjct: 527 YSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 163/327 (49%), Gaps = 1/327 (0%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
N + + + ++ LVR YD V +R M+ +GV L++L++ L + V
Sbjct: 99 NPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLG 158
Query: 252 YKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+ V + FK S FN LI+G C ++ +A + + + +G+ P V ++T +
Sbjct: 159 FSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNG 218
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
C+ +K+M E C+P V++Y+I++ +L K + +NEA+ ++ M+S P
Sbjct: 219 LCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPT 278
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y+SLI+ + +G+ K A+ +F++M + + P+V+T++ ++ + C AL +
Sbjct: 279 VVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFG 338
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
KM + +PD TY+ L+ C+ K + LL M ++ D T++ V + G
Sbjct: 339 KMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKG 398
Query: 491 KLELACSFFEEMISKGIVPYHSTYKML 517
+ A S MI +G+ P TY L
Sbjct: 399 MVSEAQSIINLMIERGLRPNVVTYNSL 425
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 162/342 (47%), Gaps = 18/342 (5%)
Query: 125 VSNSLVEQTL--RRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
VS S++ +L R N+ F + G T YN+++ + S ++
Sbjct: 245 VSYSIIIDSLCKNRLVNEAVDLF----YHMRSIGISPTVVTYNSLIYGMCNSGQWKQASI 300
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
L KEM E N + T S ++ L + G +A+ F M + +E D S L+ +
Sbjct: 301 LFKEMLEWNMK-PDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGV 359
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQI------FNILIHGWCKTRKVDDAQKAMKEMFQQG 296
K + + + + E LS I F+I + +CK V +AQ + M ++G
Sbjct: 360 CKSSLWKESSTLLNEM-----LSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERG 414
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
P+VV+Y ++ YC + M KGC P V++Y I++ K+++I+EA
Sbjct: 415 LRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAK 474
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+++++M P++ +++LI L +AGR A E+F+ M G P+++TY+T++S
Sbjct: 475 QLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGF 534
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
C + AL L + +++ KP+ LL C+ +++
Sbjct: 535 CKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLE 576
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 106/212 (50%), Gaps = 3/212 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF- 255
+ T S + + G +A M + G+ + + LMD + ++ A KVF
Sbjct: 384 VVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFD 443
Query: 256 -LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ K C P +NILI G+CK+ ++D+A++ EM +G +P+ +++T I C+
Sbjct: 444 IMVNKGCAP-DVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQA 502
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ K+M GC P +ITY+ ++ K ++EAL ++E +K P+
Sbjct: 503 GRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVIC 562
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
L+ + KAG+++DA E+F + + + P+V
Sbjct: 563 KILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 109/242 (45%)
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
DDA +M P + + + R K + V ++M+ G SV T TI+
Sbjct: 86 DDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTIL 145
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ L + V K+ P +++LI L GR+ +A E + + +G
Sbjct: 146 INCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGY 205
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P V T+ +++ C + A+ ++KM E C+P+ +Y+ ++ C+ + +
Sbjct: 206 QPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVD 265
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L HM +S TY SL+ G+ SG+ + A F+EM+ + P T+ +L + L
Sbjct: 266 LFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALC 325
Query: 523 KK 524
K+
Sbjct: 326 KE 327
>gi|449477323|ref|XP_004154991.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g18900-like [Cucumis sativus]
Length = 874
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/373 (27%), Positives = 180/373 (48%), Gaps = 7/373 (1%)
Query: 92 NHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWA 151
N V+ +S IL + P EA+ S+ Q L+R +D A GFF W
Sbjct: 312 NAPNVVESVSCILQQLKWGP-AAEEAIGKLNCSIDAYQANQILKRV-DDHAVALGFFYWL 369
Query: 152 KTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRG 210
K + H Y TM+ +LG++K+F + +L+ +M + +G ++ T + I+ R
Sbjct: 370 KRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQM--IKDGCQPNVVTYNRIIHSYGRA 427
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIF 269
DAV F+ M++ G E D L+D K ++ A ++ + +D + + +
Sbjct: 428 NYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTY 487
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+++I+ K ++ A + M +G P++V+Y I + +++ ++MQ+
Sbjct: 488 SVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQ 547
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
G +P +TY IVM LG + EA ++ +M+ + +PD Y L+ + K+G V+
Sbjct: 548 SGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQK 607
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A E + M K G+ PNV T N+++S+ + +A +LLQ M KP +TY LL
Sbjct: 608 AWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTFGLKPSLQTYTLLLS 667
Query: 450 MCCRKKRMKVLNF 462
CC + + F
Sbjct: 668 -CCTDAQTNDMGF 679
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 129/261 (49%), Gaps = 1/261 (0%)
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ ++ K + +M + G P+VV+Y I Y R + + K+MQE GC+P +
Sbjct: 391 RAKQFAAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRV 450
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++ K+ ++ A+ +YEKM+ PDT YS +I L KAG + A+ +F M
Sbjct: 451 TYCTLIDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRM 510
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+G VPN++TYN MI+ E ALKL + M++ +PD TY ++++ +
Sbjct: 511 VDEGCVPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFL 570
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST-YKM 516
+ + M K + D Y LV +SG ++ A ++ M+ G+ P T +
Sbjct: 571 EEAEGIFIEMQKKNWVPDEPVYGLLVDLWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSL 630
Query: 517 LEEKLEKKRLGNAKERINKLL 537
L L +L +A + + +L
Sbjct: 631 LSAFLRVHQLSDAYQLLQSML 651
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 120/242 (49%), Gaps = 4/242 (1%)
Query: 280 RKVDDAQKAMKEMFQ----QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
++VDD A+ + F D +YT I R K F ++ L +M + GC+P+
Sbjct: 354 KRVDDHAVALGFFYWLKRLPRFRHDGHTYTTMIGLLGRAKQFAAINKLLDQMIKDGCQPN 413
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+TY ++H+ G+A + +A+ V+++M+ C PD Y +LI I +K+G + A ++E
Sbjct: 414 VVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTLIDIHAKSGFLDVAMGMYE 473
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M+ G+ P+ TY+ MI+ A +L +M ++ C P+ TY ++ + + +
Sbjct: 474 KMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGCVPNLVTYNIMIALQAKAR 533
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
++ L M ++ D TY ++ L G LE A F EM K VP Y
Sbjct: 534 NYEIALKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVPDEPVYG 593
Query: 516 ML 517
+L
Sbjct: 594 LL 595
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 100/229 (43%), Gaps = 17/229 (7%)
Query: 305 TCFIEHYCREKDFRKVDD------------TLKEMQEKGCKPSVITYTIVMHALGKAKQI 352
C I+ Y + ++VDD L + G TYT ++ LG+AKQ
Sbjct: 341 NCSIDAYQANQILKRVDDHAVALGFFYWLKRLPRFRHDG-----HTYTTMIGLLGRAKQF 395
Query: 353 NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
K+ ++M D C P+ Y+ +I +A ++DA +F+ M++ G P+ +TY T+
Sbjct: 396 AAINKLLDQMIKDGCQPNVVTYNRIIHSYGRANYLQDAVNVFKQMQEAGCEPDRVTYCTL 455
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
I + A+ + +KM++ PD TY+ ++ + + + L M
Sbjct: 456 IDIHAKSGFLDVAMGMYEKMQDAGLTPDTFTYSVMINCLGKAGHLNAAHRLFCRMVDEGC 515
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ TY ++ ++ E+A + +M G P TY ++ E L
Sbjct: 516 VPNLVTYNIMIALQAKARNYEIALKLYRDMQQSGFEPDKVTYCIVMEVL 564
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 117/287 (40%), Gaps = 42/287 (14%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDA 216
TP+ Y+ M++ LGK+ L M ++ G V +L T + ++ + Y+ A
Sbjct: 481 TPDTFTYSVMINCLGKAGHLNAAHRLFCRM--VDEGCVPNLVTYNIMIALQAKARNYEIA 538
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIH 274
++ +R M++ G E D ++M+ L +E A +F+E K+ +P ++ +L+
Sbjct: 539 LKLYRDMQQSGFEPDKVTYCIVMEVLGHCGFLEEAEGIFIEMQKKNWVP-DEPVYGLLVD 597
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
W K+ V A + M + G P+V + + + R L+ M G KP
Sbjct: 598 LWGKSGNVQKAWEWYHAMLKAGLKPNVPTCNSLLSAFLRVHQLSDAYQLLQSMLTFGLKP 657
Query: 335 SVITYTIVMHALGKAKQINEAL----------------------------------KVYE 360
S+ TYT+++ A+ + K +
Sbjct: 658 SLQTYTLLLSCCTDAQTNDMGFCCELMQVTGHPAHTFLVSLPSAGPNGQNVRDHMSKFLD 717
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
M S+D +++ L K+G ++A ++E ++ V P+ +
Sbjct: 718 LMHSEDRESKRGLVDAVVDFLHKSGLKEEAGCVWEAAMQKNVYPDAV 764
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 157/303 (51%), Gaps = 1/303 (0%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
M + G+ VL++ K ++ A +VF E K I S +N LI G C K
Sbjct: 255 MVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGK 314
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V++ K M+EM G SP+ +++ C ++ +C++ +D + M E+ +P V+ Y I
Sbjct: 315 VEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNI 374
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + ++ +A+ V E M P+ + Y+ LI S++G + A+ + ++MK++G
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ +V+TYN +I + C + E A+KLL +M E +P+ TY +++ C K +K
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ T M K + TY ++ + GK++ A EM+ K +VP TY+ ++E +
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Query: 522 EKK 524
+K
Sbjct: 555 MEK 557
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 6/339 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S ++++ ++ LV R D A +AFR + V D + ++ L + + A V
Sbjct: 155 STSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVA 214
Query: 256 LEFKD-CIPLSSQIFNILIHGWCKTRKVDD---AQKAMKEMFQQGFSPDVVSYTCFIEHY 311
+ K + S +N LI G+CK + +KEM + G SP V++ I Y
Sbjct: 215 KDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGY 274
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C+ + +EM+++G SV+TY ++ L ++ E +K+ E+M+ P+
Sbjct: 275 CKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNE 334
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
+ ++ K G + DAN+ + M ++ V P+V+ YN +I + E+A+ + +
Sbjct: 335 ITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEA 394
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M + P+ TY L+ R + + LL M + + D TY L+ L G+
Sbjct: 395 MAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGE 454
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
+ A +EM G+ P H TY + + K GN K
Sbjct: 455 VRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDK--GNIK 491
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 98/208 (47%), Gaps = 4/208 (1%)
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+PS + ++ L AK+++ A K + PD ++++I L + G+++ A +
Sbjct: 153 RPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGD 212
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALK---LLQKMEEDLCKPDCETYAPLLK 449
+ +D+K G+ P+V TYN++I C + N LL++M E P T+ L+
Sbjct: 213 VAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLIN 272
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ + M + ++ TY SL+ GL GK+E EEM G+ P
Sbjct: 273 GYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSP 332
Query: 510 YHSTYK-MLEEKLEKKRLGNAKERINKL 536
T+ +L+ +K + +A + I+ +
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGM 360
>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 642
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 131/521 (25%), Positives = 224/521 (42%), Gaps = 57/521 (10%)
Query: 41 SSTESPSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEK---SRISSRVLSENHETDV 97
S + SP L IK D++ + F +PS+ +++ +N K S+R L E
Sbjct: 14 SISTSPHLYERIKQTDNEIVNM-FRVPSMNNKMQNLPMNRKFSGKDTSTRKLDE------ 66
Query: 98 DKISKILSKQYQSPD--KVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
+ +IL PD K +E LK + V + LV + L+ ++ FF WA +
Sbjct: 67 -RFIRILKIFKWGPDAEKALEVLK---LKVDHRLVHEVLK-IDVEINVKIQFFKWAGKRR 121
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
+ H + ++ L ++ + MW+ +++M + +S +S I++ L + +
Sbjct: 122 NFEHDSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGKAKMVNK 181
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQIFNIL 272
A+ F +K + + ++ L + +E ++++ E +C P + ++ L
Sbjct: 182 ALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFP-DTVTYSAL 240
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I + K D A + EM + G P YT + Y + K D +KEM++KGC
Sbjct: 241 ISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGC 300
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK---- 388
+V TYT + LGKA ++++A +V+ M D C PD +SLI IL K GR++
Sbjct: 301 TLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLK 360
Query: 389 --------------------------------DANEIFEDMKKQGVVPNVLTYNTMISSA 416
+A FE MK G+ P+ TY+ +I
Sbjct: 361 LFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGF 420
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
C + E AL LL++M+E P Y L+ + KR + N L + +N A
Sbjct: 421 CKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSA 480
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
YA +++ + G+L A F EM G P Y L
Sbjct: 481 RVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNAL 521
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 175/374 (46%), Gaps = 7/374 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G T ++Y T++ + K K +++KEM + +++ T + ++ L + GR
Sbjct: 262 ENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKD-KGCTLTVFTYTEWIKGLGKAGRV 320
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNI 271
DDA F M K G + D ++ L++ L K +E K+F +E C P + +N
Sbjct: 321 DDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKP-NVVTYNT 379
Query: 272 LIHGW--CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+I CK +A ++M G +P +Y+ I+ +C+ K L+EM E
Sbjct: 380 VIKALFECKA-PASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDE 438
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
KG P Y ++++LGK K+ A +++ ++K + Y+ +I K GR+ +
Sbjct: 439 KGFPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSE 498
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A ++F +M+K G P+V YN ++S + A LL+ M+E+ C PD ++ +L
Sbjct: 499 AVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILN 558
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
R + M + + DA +Y +++ L +G E A EM KG
Sbjct: 559 GLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEY 618
Query: 510 YHSTYKMLEEKLEK 523
+ TY + E + K
Sbjct: 619 NNITYTSILEAVGK 632
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 116/241 (48%), Gaps = 9/241 (3%)
Query: 116 EALKGCGVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGK 173
E +KGCG++ S+ + F +N + A + G+ P Y ++++ LGK
Sbjct: 399 EKMKGCGIAPSSFTYSILIDGFCKTNRIEKAL-LLLEEMDEKGFPPCPAAYCSLINSLGK 457
Query: 174 SKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR 233
K++ EL E+ E N G+ S + +++ + GR +AV+ F M+K G + D
Sbjct: 458 VKRYEAANELFLELKE-NCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVY 516
Query: 234 ALSVLMDTLVKGNSVEHAYKVF--LEFKDCIP-LSSQIFNILIHGWCKTRKVDDAQKAMK 290
A + LM +V+ ++ A + ++ C P L+S NI+++G +T D A +
Sbjct: 517 AYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSH--NIILNGLARTGVPDRAIEMFA 574
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
+M PD VSY + F + ++EM KG + + ITYT ++ A+GK
Sbjct: 575 KMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAVGKVD 634
Query: 351 Q 351
+
Sbjct: 635 E 635
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 96/199 (48%), Gaps = 5/199 (2%)
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD-DCLPDTSFYSSLIFILSKA 384
+++ + CKP+ TY ++ L + + + ++Y +M +D +C PDT YS+LI K
Sbjct: 188 QIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKL 247
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G A +F++MK+ G+ P Y T++ + E AL ++++M++ C TY
Sbjct: 248 GHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTY 307
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
+K + R+ + M K+ D SL+ L + G+LE+ F +M S
Sbjct: 308 TEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGRLEVTLKLFRKMES 367
Query: 505 ----KGIVPYHSTYKMLEE 519
+V Y++ K L E
Sbjct: 368 WQCKPNVVTYNTVIKALFE 386
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/343 (28%), Positives = 170/343 (49%), Gaps = 5/343 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
SL+ S ++ + A++ M+ G + D +VL++ + K ++ A K
Sbjct: 81 SLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFL 140
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ C P + NI++ C T + DA+K + +M ++G SP VV++ I CR
Sbjct: 141 NNMPSYGCQP-NVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCR 199
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + D L++M GC P+ ++Y ++H K K+++ A++ + M S C PD
Sbjct: 200 QGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVT 259
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++L+ L K G+V A EI + +G P ++TYNT+I + E A+KLL +M
Sbjct: 260 YNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMR 319
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
KPD TY+ L+ R+ ++ + + +A TY S++ GL +S + +
Sbjct: 320 RKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTD 379
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
A F MISK P +TY +L E + + G AKE ++ L
Sbjct: 380 RAIDFLAYMISKRCKPTEATYTILIEGIAYE--GLAKEALDLL 420
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 172/332 (51%), Gaps = 7/332 (2%)
Query: 182 ELVKEMDELNN--GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+ +K +DE+ N + T + ++ + + GR D+A++ M YG + + ++++
Sbjct: 100 QAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 159
Query: 240 DTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
++ A K+ + K C P S FNILI+ C+ + A +++M G
Sbjct: 160 RSMCSTGRWMDAEKLLSDMLRKGCSP-SVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 218
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+P+ +SY + +C+EK + + L M +GC P ++TY ++ AL K +++ A++
Sbjct: 219 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 278
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ ++ S C P Y+++I LSK G+ + A ++ ++M+++G+ P+++TY++++S
Sbjct: 279 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 338
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETY-APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
+ + A+K +E +P+ TY + +L +C ++ + ++F L +M
Sbjct: 339 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF-LAYMISKRCKPTE 397
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIV 508
TY L+ G+ G + A E+ S+G+V
Sbjct: 398 ATYTILIEGIAYEGLAKEALDLLNELCSRGLV 429
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 125/273 (45%), Gaps = 4/273 (1%)
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
C LS F+ + CK V A K + EM +G PDVV+Y I C+E +
Sbjct: 79 CFSLSG--FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEA 136
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
L M GC+P+VIT+ I++ ++ + +A K+ M C P ++ LI
Sbjct: 137 IKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINF 196
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L + G + A +I E M G PN L+YN ++ C + + A++ L M C PD
Sbjct: 197 LCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPD 256
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY LL C+ ++ V +L + S TY +++ GL + GK E A +
Sbjct: 257 IVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLD 316
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
EM KG+ P TY L L ++ G E I
Sbjct: 317 EMRRKGLKPDIITYSSLVSGLSRE--GKVDEAI 347
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 169/343 (49%), Gaps = 4/343 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--F 258
STI+ L + D+A + + M G+ D + L+ + A+ + E
Sbjct: 154 STIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMIL 213
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K+ P + +N LI CK KV +++ + M ++G PDVV Y+ ++ YC + +
Sbjct: 214 KNINP-NIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQ 272
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
K M + G P V +Y I+++ L K K+++EA+ + +M + +PDT YSSLI
Sbjct: 273 KAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLI 332
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L K GR+ ++ ++M +G N++TYN+++ C + A+ L KM+E +
Sbjct: 333 DGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQ 392
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P+ TY L+ C+ R+K L H+ +D TY ++ GL + G + A +
Sbjct: 393 PNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAM 452
Query: 499 FEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKLLAHA 540
+M G +P T++ ++ LEK A++ +++++A
Sbjct: 453 KSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKG 495
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 100/375 (26%), Positives = 178/375 (47%), Gaps = 14/375 (3%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDD 215
H P + + ++ L K K + + L K+M+ G V L T+S ++ G+
Sbjct: 6 HIPPIIEFGKILGSLVKMKHYPTVISLSKQMEA--KGIVPDLVTLSILINCFCHLGQMAF 63
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI-----PLSSQIFN 270
+ + K G + +T ++++TL+KG ++ K L F D + + +
Sbjct: 64 SFSVLGKILKLGYQPNT----IILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYG 119
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
IL++G CK + A K ++ + + PDVV Y+ I+ C++K + D EM +
Sbjct: 120 ILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNAR 179
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P VITYT ++ A Q+ EA + +M + P+ Y++LI L K G+VK++
Sbjct: 180 GIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKES 239
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ M K+GV P+V+ Y+ ++ C E + A ++ M + PD +Y ++
Sbjct: 240 KNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIING 299
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ KR+ LL M ++ D TY+SL+ GL + G++ +EM +G
Sbjct: 300 LCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPAN 359
Query: 511 HSTYKMLEEKLEKKR 525
TY L + L K +
Sbjct: 360 LVTYNSLLDGLCKNQ 374
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 156/344 (45%), Gaps = 4/344 (1%)
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LE 257
++T+M+ L G ++ + G + D + +L++ L K A K+ +E
Sbjct: 83 LNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIE 142
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ P +++ +I G CK + VD+A EM +G PDV++YT I +C
Sbjct: 143 DRSTRP-DVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQL 201
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ L EM K P++ TY ++ L K ++ E+ + M PD YS L
Sbjct: 202 MEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSIL 261
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ G V+ A +IF M + GV P+V +YN +I+ C + A+ LL++M
Sbjct: 262 MDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNM 321
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD TY+ L+ C+ R+ + L M + TY SL+ GL ++ L+ A +
Sbjct: 322 IPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIA 381
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHA 540
F +M +GI P TY L + L K RL + LL
Sbjct: 382 LFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKG 425
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 108/224 (48%), Gaps = 2/224 (0%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
QTG YN +++ L K K+ L++EM N T S+++ L + GR
Sbjct: 282 VQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLH-KNMIPDTVTYSSLIDGLCKLGR 340
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNI 271
++ + M G + + L+D L K +++ A +F++ K+ I + +
Sbjct: 341 ITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 400
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G CK ++ Q + + +G+ DV +YT I C+E F + +M++ G
Sbjct: 401 LIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNG 460
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
C P+ +T+ I++ +L + + ++A K+ +M + LP +F+S
Sbjct: 461 CIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPFRNFHS 504
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 95/205 (46%), Gaps = 1/205 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ I+ L +G R D+A+ R M + DT S L+D L K + + E
Sbjct: 294 NIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHH 353
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
P + +N L+ G CK + +D A +M ++G P+ +YT I+ C+ +K
Sbjct: 354 RGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKK 413
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ + KG V TYT+++ L K +EAL + KM+ + C+P+ + +I
Sbjct: 414 GQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIR 473
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVP 404
L + A ++ +M +G++P
Sbjct: 474 SLLEKDENDKAEKLLHEMIAKGLLP 498
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 177/368 (48%), Gaps = 4/368 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G++ YN M+ L +K L +++ ++ L+N ++ T + ++ + G ++
Sbjct: 167 GFLPDIVTYNIMIGSLCNRRKLGLALKVLDQL-LLDNCMPTVITYTILIEATIVEGGINE 225
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILI 273
A++ M G+ D + ++ + K VE A ++ L K C P +NIL+
Sbjct: 226 AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKP-DVISYNILL 284
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+ K D+ +K + EMF +G P+ V+Y+ I CR + LK M EK
Sbjct: 285 RAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELT 344
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P +Y ++ AL K +++ A+ + + M S+ CLPD Y++++ L K G A EI
Sbjct: 345 PDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEI 404
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
F ++ G PNV +YNTMIS+ + + AL ++ M PD TY L+ CR
Sbjct: 405 FNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCR 464
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
++ LL M ++ +Y ++ GL + +++ A F EMI KG P +T
Sbjct: 465 DGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETT 524
Query: 514 YKMLEEKL 521
Y +L E +
Sbjct: 525 YILLIEGI 532
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 164/335 (48%), Gaps = 1/335 (0%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
++ R + G++++++ + G D + L+ ++E A +V +
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 133
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+N +I G+CK +++ A + + M +GF PD+V+Y I C +
Sbjct: 134 EPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALK 193
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L ++ C P+VITYTI++ A INEA+K+ E+M + LPD Y+++I +
Sbjct: 194 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 253
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K G V+ A E+ + +G P+V++YN ++ + + + + KL+ +M C+P+
Sbjct: 254 KEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 313
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY+ L+ CR R+ +L M + +++ D +Y L+ L + G+L+LA + M
Sbjct: 314 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 373
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGN-AKERINKL 536
IS G +P Y + L K N A E NKL
Sbjct: 374 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 408
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 143/307 (46%), Gaps = 7/307 (2%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + I+R + + G + A E + G + D + ++L+ + + K+ E
Sbjct: 244 TYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEM 303
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ C P + ++ILI C+ ++D+A +K M ++ +PD SY I C+E
Sbjct: 304 FSRGCEP-NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 362
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ M GC P ++ Y ++ AL K N+AL+++ K++ C P+ S Y++
Sbjct: 363 LDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNT 422
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L G A + M +GV P+ +TYN++IS C E A+ LL ME+
Sbjct: 423 MISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 482
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG----KL 492
+P +Y +L C+ +R+ + M + + TY L+ G+ +G +
Sbjct: 483 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM 542
Query: 493 ELACSFF 499
ELA S F
Sbjct: 543 ELANSLF 549
>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 808
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 198/431 (45%), Gaps = 45/431 (10%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
T E ++ ++ G+S +L + E++N ++ ++++ LV+ G+ D A++
Sbjct: 125 TREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQL 184
Query: 220 FRGMKKY----GVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILI 273
+ M + G D S+++ L +E ++ + K C+P +N++I
Sbjct: 185 YDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVP-HVVFYNMII 243
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G+CK + A + +KE+ +G P V +Y I +C+ +F VD L EM +G
Sbjct: 244 DGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLN 303
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+V + V+ A K + +A + +M C PD + Y+++I K GR+K+A+E
Sbjct: 304 MNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEF 363
Query: 394 FEDMKKQGVVPNVLTYNTMISSAC-----------------------------------A 418
E K++G++PN +Y ++ + C
Sbjct: 364 LEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVV 423
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
E + AL + +KM E PD + Y L+ C+ R + LL+ M +V D
Sbjct: 424 HGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYV 483
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKL- 536
+A+L+ G I +G+L+ A F+ +I KG+ P Y M++ + ++ +A +NK+
Sbjct: 484 FATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMK 543
Query: 537 -LAHAKEQKTF 546
+ HA ++ T+
Sbjct: 544 NVHHAPDEYTY 554
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/366 (25%), Positives = 168/366 (45%), Gaps = 12/366 (3%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
+++N ++D K E ++ M E+ G + T +T++ +GGR +A E
Sbjct: 307 KVFNNVIDAEFKYGLVTKAAETMRRMAEMGCG-PDITTYNTMINFSCKGGRIKEADEFLE 365
Query: 222 GMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFL-----EFKDCIPLSSQIFNILIHG 275
K+ G+ + + + LM K G+ V+ A +F E D + + I +++HG
Sbjct: 366 KAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHG 425
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
++D A ++M ++G PD Y + C+ F + L EM ++ +P
Sbjct: 426 -----EIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPD 480
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V + +M + +++EA+K+++ + P Y+++I K G++ DA
Sbjct: 481 VYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLN 540
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
MK P+ TY+T+I + + +ALK+ +M + KP+ TY L+ C+K
Sbjct: 541 KMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKA 600
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
M + M D+ + TY +LV G ++GK E A S FE M+ G P +T+
Sbjct: 601 DMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFH 660
Query: 516 MLEEKL 521
L L
Sbjct: 661 YLINGL 666
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 135/306 (44%), Gaps = 15/306 (4%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFK 259
+ +M L + GR+ M V+ D + LMD ++ ++ A K+F + +
Sbjct: 450 NVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIR 509
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ +N +I G+CK K+ DA + +M +PD +Y+ I+ Y ++ D
Sbjct: 510 KGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSS 569
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+M + KP+VITYT +++ K + A KV+ MKS D +P+ Y++L+
Sbjct: 570 ALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVG 629
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS------EEENA-------- 425
KAG+ + A IFE M G PN T++ +I+ + EE+++
Sbjct: 630 GFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLI 689
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L M + Y ++ C+ + LLT M +D+ + +++ G
Sbjct: 690 LDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHG 749
Query: 486 LIESGK 491
L GK
Sbjct: 750 LCHKGK 755
Score = 42.4 bits (98), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 84/205 (40%), Gaps = 7/205 (3%)
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYE--KMKSDDCLPDTSFYSSLIFILSKA 384
++ + + V+ + + + ALK ++ + C D +SSL+ +L+
Sbjct: 45 LESRFAESKVVVSDVAHFVIDRVHDAELALKFFDWASTRPFSCSLDGVAHSSLLKLLASF 104
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE-DLCKPDCET 443
+ + E+MK Q + P ++ +I + + AL+L + E C P
Sbjct: 105 RVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHTVREMHNCLPTVVA 164
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKND----VSMDAGTYASLVRGLIESGKLELACSFF 499
LL + ++ V L M + D +D T + +V+GL GK+E
Sbjct: 165 SNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGRRLV 224
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKK 524
++ KG VP+ Y M+ + KK
Sbjct: 225 KDRWGKGCVPHVVFYNMIIDGYCKK 249
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 168/353 (47%), Gaps = 35/353 (9%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++ +L R R+D A F+ M + D ++L+ L + N +E A K+
Sbjct: 9 TYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRM 68
Query: 259 KD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K+ C+P I+N LI G+ K + A K + EM + P VV+YT ++ C+ +
Sbjct: 69 KEMGCVP-DDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAER 127
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
R L EM++KGC P++ TY +++ L + ++++EA K+ E+M PD Y+S
Sbjct: 128 TRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNS 187
Query: 377 LI--------------FI------------------LSKAGRVKDANEIFEDMKKQGVVP 404
I F+ L K+G + A+ + + M +G P
Sbjct: 188 FIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTP 247
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+V+TY+++I C E E A+ LL M + C+P+ Y LL R + +L
Sbjct: 248 DVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDML 307
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M + + D +Y + + GL ++ +++ A + F+ M+ +G P S+Y ML
Sbjct: 308 VEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSML 360
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 172/376 (45%), Gaps = 41/376 (10%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
SN L A K + G + +YN ++ K+K F ++ + EM + N+ ++
Sbjct: 55 SNQLEKARKLLGRMK-EMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVK-NHCLPTV 112
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T + I+ L + R DAV+ M+ G + +V+++ L + ++ A K+ E
Sbjct: 113 VTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEE 172
Query: 258 ------FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
F D + +N I G CK +VD+A+K + M +PDVVSYT I
Sbjct: 173 MAVRGYFPDVVT-----YNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGL 224
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C+ D L M +GC P V+TY+ ++ K ++ A+ + + M C P+
Sbjct: 225 CKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNM 284
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y+SL+ L + G + A ++ +M+++G P+V++YN I C + A + +
Sbjct: 285 VAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDR 344
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M E C P+ +Y+ M +++ LL Y L+ GL + G+
Sbjct: 345 MVERGCTPNASSYS-----------MLIVDILL--------------YTVLLDGLCKGGR 379
Query: 492 LELACSFFEEMISKGI 507
+ AC+ F +++ + I
Sbjct: 380 FDEACALFSKVLDEKI 395
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 119/538 (22%), Positives = 217/538 (40%), Gaps = 99/538 (18%)
Query: 76 HRLNEKSRISSRVLSENHETDVDKISKIL-----SKQYQSPDKVVEALKGCGVSVSNSLV 130
HR ++ S + ++ ++ + D + +L S Q + K++ +K G +++
Sbjct: 21 HRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIY 80
Query: 131 EQTLRRFSN--DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD 188
+ +S D AF F + + T Y +VD L K+++ + VK +D
Sbjct: 81 NALISGYSKAKDFGQAFKFLA-EMVKNHCLPTVVTYTNIVDGLCKAER---TRDAVKLLD 136
Query: 189 ELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
E+ + S + T + I+ L + D+A + M G D + + L K +
Sbjct: 137 EMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCD 196
Query: 247 SVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
V+ A K +P++ + + +I+G CK+ +D A + + M +G +PDVV+Y
Sbjct: 197 RVDEARKFLAR----MPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTY 252
Query: 305 TCFIEHYCREKDFR-----------------------------------KVDDTLKEMQE 329
+ I+ +C+ + K +D L EM+
Sbjct: 253 SSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMER 312
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF---------- 379
+G P V++Y + L KA+++ +A V+++M C P+ S YS LI
Sbjct: 313 RGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLD 372
Query: 380 ILSKAGRVKDANEIFEDMKKQGVV-PNVLTYNTMISSACARSEEENALKLLQKMEEDLC- 437
L K GR +A +F + + + P+V YN M+ S C R + + AL++ ++M E C
Sbjct: 373 GLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC 432
Query: 438 ---------------------------------KPDCETYAPLLKMCCRKKRMKVLNFLL 464
PD TY L+ C+ + L
Sbjct: 433 NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELF 492
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
K D TY++L+ GL+ E A F +++ + VP T +L KL+
Sbjct: 493 EEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLK 550
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 124/277 (44%), Gaps = 41/277 (14%)
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G+ +V +Y + RE K +EM +K C+P T+ I++ L ++ Q+ +A
Sbjct: 2 GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61
Query: 356 LKVYEKMKSDDCLPDTSFYSSLI--------------FI--------------------- 380
K+ +MK C+PD + Y++LI F+
Sbjct: 62 RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L KA R +DA ++ ++M+ +G PN+ TYN ++ C + + A K+L++M PD
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY +K C+ R+ L M V+ D +Y +++ GL +SG L+ A +
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
M ++G P TY L + K G ER LL
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCK---GGEVERAMGLL 272
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 176/391 (45%), Gaps = 44/391 (11%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
VD+ K L++ +PD V +V N L + S DL A +
Sbjct: 198 VDEARKFLARMPVTPDVVSYT------TVINGLCK------SGDLDSASRMLDHMSNRGC 245
Query: 157 YMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-----VSLATMSTIMRRLVR 209
TP++ Y++++D FC E+ + M L++ ++ ++++ L R
Sbjct: 246 ---TPDVVTYSSLID------GFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHR 296
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQ 267
G A + M++ G D + + +D L K V+ A VF + C P +S
Sbjct: 297 LGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASS 356
Query: 268 ---------IFNILIHGWCKTRKVDDAQKAMKEMFQQGF-SPDVVSYTCFIEHYCREKDF 317
++ +L+ G CK + D+A ++ + PDV Y ++ +C+ +
Sbjct: 357 YSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQI 416
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
K K+M EK C +V+T+ I++H L ++++A + M + +PD Y +L
Sbjct: 417 DKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTL 475
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ + K G+ A E+FE+ K G VP+V+TY+ +I+ + E A L K+ E
Sbjct: 476 VDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRW 535
Query: 438 KPDCETYAPL---LKMCCRKKRMKVLNFLLT 465
PD +T L LK+ + ++ +V++ LT
Sbjct: 536 VPDDKTLGLLHRKLKLLNKPRKAEVVDLYLT 566
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 182/400 (45%), Gaps = 20/400 (5%)
Query: 145 FGFFTW--AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE---------------- 186
F FFTW + + + HT Y TM+ + + F L++
Sbjct: 1 FSFFTWLSSPANSTFRHTLXSYCTMIHFVCTHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 187 -MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
++ N + S ++ + G DAVE +R +++ +++ L+K
Sbjct: 61 ILETKGNQRSDIYVFSGLITAYLESGFLRDAVECYRLTREHKFWLPFDTCRKVLEHLMKL 120
Query: 246 NSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+ + + EF +C P S FNIL H +CK + AQ + + G P VVSY
Sbjct: 121 KYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSY 180
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ Y R D + M G P V TY+++++ L K +++ A +++++M
Sbjct: 181 NTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLV 240
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
+P+ +++LI K GRV A EI++ M Q ++P+++TYNT+I C + +
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQ 300
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A L+ +M KPD TY L+ CC++ + M + ++ +D Y +L+
Sbjct: 301 AHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
GL + G+ A EM+S G+ P TY M+ ++ KK
Sbjct: 361 GLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKK 400
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 128/255 (50%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ + M GV D SVL++ L K + ++ A ++F
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELF 235
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K +P + F LI G CK +VD A + K+M Q PD+++Y I C+
Sbjct: 236 DEMLVKGLVP-NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK 294
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D + D + EM KG KP ITYT ++ K ++ A + ++M ++ D
Sbjct: 295 KGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 354
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P+ TY +I+ C + + KLL++M+
Sbjct: 355 YTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQ 414
Query: 434 EDLCKPDCETYAPLL 448
D P TY L+
Sbjct: 415 XDGHAPSVVTYNVLM 429
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 146/318 (45%), Gaps = 6/318 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W +E L GY SL + + R + G A F + K+G+
Sbjct: 117 LMKLKYFKLVWGFYEEF--LECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLR 174
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
+ + LM+ ++ ++ +K+ + P +++LI+G CK K+D A +
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXP-DVYTYSVLINGLCKESKMDXANE 233
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
EM +G P+ V++T I+ +C+ + K+M + P +ITY +++ L
Sbjct: 234 LFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLC 293
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
K +N+A + ++M PD Y++LI K G + A E + M ++ + + +
Sbjct: 294 KKGDLNQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDV 353
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
Y +IS C +A K++++M KPD TY ++ C+K + + LL M
Sbjct: 354 AYTALISGLCQEGRSVDAEKMMREMLSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEM 413
Query: 468 FKNDVSMDAGTYASLVRG 485
+ + TY L+ G
Sbjct: 414 QXDGHAPSVVTYNVLMNG 431
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 94/196 (47%), Gaps = 1/196 (0%)
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ L K K YE+ F++ L K G ++ A +F+ + K G
Sbjct: 113 VLEHLMKLKYFKLVWGFYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWG 172
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+V++YNT+++ + + KL M PD TY+ L+ C++ +M N
Sbjct: 173 LRPSVVSYNTLMNGYIRLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXAN 232
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M + + T+ +L+ G ++G+++LA +++M+S+ ++P TY L L
Sbjct: 233 ELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGL 292
Query: 522 EKKR-LGNAKERINKL 536
KK L A + I+++
Sbjct: 293 CKKGDLNQAHDLIDEM 308
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 184/392 (46%), Gaps = 7/392 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ GY + T+V L + K LV+ M + L T ++ L + G
Sbjct: 162 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM-VVKGCQPDLVTYGAVINGLCKRGE 220
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI- 271
D A+ M+K +E D S ++D+L K V+ A +F E D + +F
Sbjct: 221 PDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM-DNKGIRPDVFTYS 279
Query: 272 -LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI C + DA + + +M ++ +P+VV++ I+ + +E + + EM ++
Sbjct: 280 SLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQR 339
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P+++TY +++ +++EA +++ M S DCLPD Y++LI KA +V D
Sbjct: 340 SIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDG 399
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+F DM ++G+V N +TY T+I S+ +NA + ++M D P+ TY LL
Sbjct: 400 MELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDG 459
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ +++ + ++ K+ + D TY + G+ ++GK+E F + KG+ P
Sbjct: 460 LCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPD 519
Query: 511 HSTYKMLEEKLEKKRLGNAKERINKLLAHAKE 542
Y + KK L KE L KE
Sbjct: 520 VIAYNTMISGFCKKGL---KEEAYTLFIKMKE 548
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/471 (24%), Positives = 212/471 (45%), Gaps = 20/471 (4%)
Query: 69 LAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL--------KG 120
L G+ +R++E + +++ ++ D + ++ +Q +K EA+ KG
Sbjct: 142 LNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQH-NKASEAVALVERMVVKG 200
Query: 121 C--GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPE-MYNTMVDVLGKSKKF 177
C + +++ +R DL K + G + +Y+T++D L K +
Sbjct: 201 CQPDLVTYGAVINGLCKRGEPDLALNL----LNKMEKGKIEADVVIYSTVIDSLCKYRHV 256
Query: 178 CLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALS 236
L EMD N G + T S+++ L GR+ DA M + + + +
Sbjct: 257 DDALNLFTEMD--NKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFN 314
Query: 237 VLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
L+D K + A K+F E + I + +N LI+G+C ++D+AQ+ M +
Sbjct: 315 SLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
PDVV+Y I +C+ K + ++M +G + +TYT ++H +A + A
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
V+++M SD P+ Y++L+ L K G+++ A +FE ++K + P++ TYN M
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C + E+ L + KPD Y ++ C+K + L M ++ D
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
+GTY +L+R + G + +EM S STY ++ + L RL
Sbjct: 555 SGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDMLHDGRL 605
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 153/325 (47%), Gaps = 1/325 (0%)
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+ S+ S ++ + + ++D + M+ GV + +++++ L + + + A
Sbjct: 62 FPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALA 121
Query: 254 VFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ + K S N L++G+C ++ +A + +M + G+ PD V++T +
Sbjct: 122 ILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLF 181
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ + ++ M KGC+P ++TY V++ L K + + AL + KM+ D
Sbjct: 182 QHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVV 241
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
YS++I L K V DA +F +M +G+ P+V TY+++IS C +A +LL M
Sbjct: 242 IYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDM 301
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
E P+ T+ L+ ++ ++ L M + + + TY SL+ G +L
Sbjct: 302 LERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 361
Query: 493 ELACSFFEEMISKGIVPYHSTYKML 517
+ A F M+SK +P TY L
Sbjct: 362 DEAQQIFTLMVSKDCLPDVVTYNTL 386
>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1071
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 193/414 (46%), Gaps = 23/414 (5%)
Query: 144 AFGFFTWAKTQTGY--MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL--AT 199
A F W Q G H M + +L +++ + ++K + ++ G S+ A
Sbjct: 28 ALKFLNWVIQQPGLELRHLTHMLSITTHILVRARLYENAKSILKHLSQMGVGSKSVFGAL 87
Query: 200 MST-------------IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
M+T ++R +R G DA+E FR M G ++L+ LVK
Sbjct: 88 MNTYPLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKER 147
Query: 247 SVEHAYKVFLEF---KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
V + F E + C +S+ FNILI+ C K+ A +K+M + G+ P VV+
Sbjct: 148 KVGAVWLFFKEMLARRVCPDVST--FNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVT 205
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y + YC++ ++ + + +M KG + TY +++ L K + + + +KM+
Sbjct: 206 YNTVLNWYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMR 265
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
P+ Y+S+I K G++ A IF++M ++PN +TYN +I C E
Sbjct: 266 KRMISPNEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFE 325
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
AL +L+ ME KP+ +Y+ LL CR + ++ +L M N + + Y +++
Sbjct: 326 QALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMI 385
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
GL +G L + ++M+ G+VP T+ +L + ++ N KE I K+
Sbjct: 386 DGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKM 439
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 185/411 (45%), Gaps = 40/411 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N +++VL K L+K+M+E +GYV S+ T +T++ + GRY A+E
Sbjct: 171 FNILINVLCVEGKLKKAGYLLKKMEE--SGYVPSVVTYNTVLNWYCKKGRYKAALELIDQ 228
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRK 281
M G+E D ++L+D L K N Y + + + + ++I +N +I+G+ K K
Sbjct: 229 MGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKEGK 288
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS------ 335
+ A + +EM P+ V+Y I+ +C + +F + L+ M+ G KP+
Sbjct: 289 IGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSA 348
Query: 336 -----------------------------VITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I YT ++ L + +NE++K+ +KM D
Sbjct: 349 LLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDG 408
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+PD +S LI + G++K+ EI M K G+ PN + Y T+I + C + A
Sbjct: 409 VVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAF 468
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
K+ M +C L+ C+ ++ V + HM K ++ T+ ++ G
Sbjct: 469 KVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGY 528
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
SG A S F+EMI G P H TY L + L + AK ++KL
Sbjct: 529 GNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKL 579
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 166/362 (45%), Gaps = 2/362 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN++++ K K + +EM LN + T + ++ G ++ A+ M
Sbjct: 276 YNSIINGFVKEGKIGAATRIFQEMSMLNL-LPNCVTYNALIDGHCHDGNFEQALTILEMM 334
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKV 282
+ G + + + S L++ L + E + + + + + + + +I G C+ +
Sbjct: 335 EATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLL 394
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+++ K + +M + G PDVV+++ I +CR + V + + +M + G P+ I YT +
Sbjct: 395 NESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTL 454
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K + EA KVY M + + L+ L K G+V A F M K G
Sbjct: 455 IYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGN 514
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
VPN +T++ +I+ A + +M + P TY LLK CR + K
Sbjct: 515 VPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKR 574
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
LL + ++D TY +++ +SG L A + F+EM+ + ++P TY ++ L
Sbjct: 575 LLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLI 634
Query: 523 KK 524
++
Sbjct: 635 RR 636
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 141/309 (45%), Gaps = 1/309 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FK 259
S ++ L R +++ + M+ G+ A + ++D L + + + K+ + K
Sbjct: 347 SALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLK 406
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
D + F++LI+G+C+ K+ + ++ + +M++ G +P+ + YT I +YC+ D +
Sbjct: 407 DGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVE 466
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
M G + +++ +L K ++ A + M +P++ + +I
Sbjct: 467 AFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIIN 526
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+G A +F++M K G P+ TY ++ + C + + A +LL K+
Sbjct: 527 GYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAV 586
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY +L + + L M + +V D+ TYA + GLI GK+ A F+
Sbjct: 587 DTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFY 646
Query: 500 EEMISKGIV 508
++ KG V
Sbjct: 647 GNLLGKGAV 655
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/370 (20%), Positives = 145/370 (39%), Gaps = 37/370 (10%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+T + L R G+ A+ M+K G+ D A +V+++ + + A +F
Sbjct: 663 TTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWS 722
Query: 261 CIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS--------------- 303
I +S + +NIL+HG+ K + + M + G PD ++
Sbjct: 723 GITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLD 782
Query: 304 --------------------YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+ I YC + K D + M P + T+ ++
Sbjct: 783 VGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSII 842
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
L + + E+ + +M C+PD Y +L+ + + G + A ++ ++M+ G+
Sbjct: 843 SVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRMGHIHGAFKLKDEMEALGIS 902
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
+ + ++ + E A +L M P T+ L+ M CR + + L
Sbjct: 903 SGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEALKL 962
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
M DV +D Y L+ GL G + A ++E+ +G+ P +TY +L + +
Sbjct: 963 KDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAIFT 1022
Query: 524 KRLGNAKERI 533
+ AK +
Sbjct: 1023 NDISLAKGEV 1032
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 100/448 (22%), Positives = 177/448 (39%), Gaps = 81/448 (18%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDE-LNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
Y M+D L ++ L+ E VK +D+ L +G V + T S ++ R G+ + E
Sbjct: 381 YTAMIDGLCRNG---LLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIIC 437
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NILIHGWCKT 279
M K G+ ++ + L+ K V A+KV++ I + F N+L+ CK
Sbjct: 438 KMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSR-IGYDANCFICNVLVSSLCKD 496
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
KV A+ M + G P+ +++ C I Y + K EM + G PS TY
Sbjct: 497 GKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTY 556
Query: 340 TIVMHALGKAKQ-----------------------------------INEALKVYEKMKS 364
++ AL +A + + +A+ ++++M
Sbjct: 557 GGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQ 616
Query: 365 DDCLPDT--------------------SFYSSLI--------------FI--LSKAGRVK 388
+ LPD+ FY +L+ F+ L +AG+ K
Sbjct: 617 RNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSK 676
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL-CKPDCETYAPL 447
A EDM+K G+ +++ N +++ + A + M + P TY L
Sbjct: 677 AALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNIL 736
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
L +KK + + L M + + D T SL+ G +S L++ ++M+ G+
Sbjct: 737 LHGYAKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGV 796
Query: 508 VPYHSTYKMLEEKL-EKKRLGNAKERIN 534
T+ ML K E +G A + +N
Sbjct: 797 AVDQCTFNMLIMKYCETDEVGKAFDLVN 824
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 177/365 (48%), Gaps = 8/365 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
Y+ ++ LGK + ++ L+KEM++L N Y T + +R L R G+ D+A E F
Sbjct: 230 YSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY----TFTICIRVLGRAGKIDEAYEIF 285
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI-LIHGWCKT 279
R M G D +VL+D L +E+A ++F++ K Q+ I L+ +
Sbjct: 286 RRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDF 345
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+D ++ +M G+ PDVV++T ++ C+ +DF + T M+++G P++ TY
Sbjct: 346 GDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTY 405
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ L +A +I +ALK+ + M+S P Y + I K+G A E FE MK
Sbjct: 406 NTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKA 465
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+VPN++ N + S A + + E+ PD TY ++K + ++
Sbjct: 466 KGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDE 525
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
LL+ M +N D SL+ L ++G+++ A F+ M + P TY L
Sbjct: 526 AVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLS 585
Query: 520 KLEKK 524
L K+
Sbjct: 586 GLGKE 590
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/438 (24%), Positives = 190/438 (43%), Gaps = 74/438 (16%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+ + VLG++ K +E+ + MD+ G L T + ++ L G+ ++A E F M
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEGCG-PDLVTYTVLIDALCNAGQLENAKELFVKM 323
Query: 224 KKYG-----------VEK------------------------DTRALSVLMDTLVKGNSV 248
K G ++K D ++L+D L K
Sbjct: 324 KANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDF 383
Query: 249 EHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
+ A+ F + K I + +N LI G + +++DA K + M G P +Y F
Sbjct: 384 DEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITF 443
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVI------------------------------ 337
I+++ + + K +T ++M+ KG P+++
Sbjct: 444 IDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGL 503
Query: 338 -----TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
TY ++M K Q++EA+ + +M + C PD +SLI L KAGRV +A +
Sbjct: 504 APDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQ 563
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+F+ MK + P V+TYNT++S + A++L + M C P+ ++ LL C
Sbjct: 564 MFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFC 623
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ +++ + + M D D TY +++ GLI+ K+ A FF ++ K + P H
Sbjct: 624 KNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHV 682
Query: 513 TYKMLEEKLEK-KRLGNA 529
T L L K ++G+A
Sbjct: 683 TICTLLPGLVKCGQIGDA 700
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDD 284
G+ ++ L L+ L K +AY++F +F + +S + +N LI + +
Sbjct: 747 GICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEK 806
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A K+M G +PD ++ + + + ++ + KEM + CKP ITY IV+
Sbjct: 807 AWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS 866
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
+L K+ +++AL + + S D P Y LI L+K GR+++A +FE+M G P
Sbjct: 867 SLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP 926
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
N +N +I+ + E A +L ++M + +PD ++Y L+ C R+ +
Sbjct: 927 NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + D Y ++ GL +S ++E A + + EM ++GIVP TY L
Sbjct: 987 NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 193/434 (44%), Gaps = 12/434 (2%)
Query: 109 QSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMV 168
Q+P++V+ + VS V L+ ++ + F++ ++ T +HT E N M+
Sbjct: 71 QNPEQVMVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPT-VLHTTETCNFML 129
Query: 169 DVL---GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRL-VRGGRYDDAVEAFRGMK 224
+ L K + ++E +++ + L T TI + L +RGG M+
Sbjct: 130 EFLRVHDKVEDMAAVFEFMQKKIIRRD----LDTYLTIFKALSIRGG-LRQMTTVLNKMR 184
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVD 283
K G + + + L+ L++ A +V+ + + S + ++ L+ K R +
Sbjct: 185 KAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSE 244
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+KEM G P+V ++T I R + + + M ++GC P ++TYT+++
Sbjct: 245 MVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLI 304
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
AL A Q+ A +++ KMK++ PD Y +L+ + G + E + M+ G +
Sbjct: 305 DALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYM 364
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P+V+T+ ++ C + + A M + P+ TY L+ R R++ L
Sbjct: 365 PDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKL 424
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP-YHSTYKMLEEKLE 522
L M V A TY + + +SG+ A FE+M +KGIVP + L E
Sbjct: 425 LDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAE 484
Query: 523 KKRLGNAKERINKL 536
RL AK N L
Sbjct: 485 MGRLREAKTMFNGL 498
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 156/364 (42%), Gaps = 25/364 (6%)
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
+V VL K K+ +++ + + +LA+ + ++ L+ + A + F+ MK
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDD 284
G D ++L+ K + ++++ E + C P + +NI+I K+ +D
Sbjct: 818 GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP-DAITYNIVISSLAKSNNLDK 876
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A ++ F P +Y I+ + + +EM + GCKP+ + I+++
Sbjct: 877 ALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILIN 936
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
GK A +++++M ++ PD Y+ L+ L AGRV +A F ++K G+ P
Sbjct: 937 GYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP 996
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+ + YN +I+ E AL L +M PD TY L+ LN L
Sbjct: 997 DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM-----------LNLGL 1045
Query: 465 THMFKNDVSM-----------DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
M + M D TY +L+RG S E A + ++ M+ G P T
Sbjct: 1046 AGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105
Query: 514 YKML 517
Y L
Sbjct: 1106 YAQL 1109
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 163/342 (47%), Gaps = 6/342 (1%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMST 202
A+ F + G T YN ++ L + W+L K+M N G A T +
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMK--NVGCAPDAFTFNM 828
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KD 260
++ + G+ + E ++ M + D ++++ +L K N+++ A F + D
Sbjct: 829 LLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD 888
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P + + + LI G K ++++A + +EM G P+ + I Y + D
Sbjct: 889 FRP-TPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
K M +G +P + +YTI++ L A +++EAL + ++KS PD Y+ +I
Sbjct: 948 CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K+ R+++A ++ +M+ +G+VP++ TYN+++ + E A ++ ++++ +PD
Sbjct: 1008 LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPD 1067
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
TY L++ + + + +M + + + GTYA L
Sbjct: 1068 VFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 176/425 (41%), Gaps = 73/425 (17%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
N+++D L K+ + W++ M ++ ++ T +T++ L + GR A+E F M
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLS-PTVVTYNTLLSGLGKEGRVQKAIELFESMI 604
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIP----LSSQIFNI------- 271
+T + + L+D K + VE A K+F + DC P ++ I+ +
Sbjct: 605 XKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVN 664
Query: 272 ----------------------LIHGWCKTRKVDDAQKAMKE-MFQ------QGFSPDVV 302
L+ G K ++ DA ++ M+Q + F D++
Sbjct: 665 HAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLM 724
Query: 303 SYTCF---------------IEHYCREKDF-----RKVDDTLKEM----------QEKGC 332
T + CRE F R + +E+ ++ G
Sbjct: 725 GGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGI 784
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P++ +Y ++ L + +A +++ MK+ C PD ++ L+ + K+G++ + E
Sbjct: 785 SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
++++M + P+ +TYN +ISS + + AL + +P TY PL+
Sbjct: 845 LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLA 904
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ R++ L M + + L+ G + G E AC F+ M+++GI P
Sbjct: 905 KVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLK 964
Query: 513 TYKML 517
+Y +L
Sbjct: 965 SYTIL 969
>gi|224070746|ref|XP_002303222.1| predicted protein [Populus trichocarpa]
gi|222840654|gb|EEE78201.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 110/452 (24%), Positives = 203/452 (44%), Gaps = 46/452 (10%)
Query: 70 AGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSL 129
A V ++R K + S S++ + +I+++ S + AL G+ ++ +
Sbjct: 3 AAAVNTNRKTSKPQFESSFDSQDISPSARLLFEIITRP--SSHDIESALSSTGIPPTHDI 60
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTGYMH--TPEMYNTMVDVLGKSKKFCLMWELVKEM 187
V + L+ + T A FF WA G H T +N MVD+LGK+ + MW+ V+ M
Sbjct: 61 VHEVLKLCHENATSAIAFFRWA----GRTHKLTSYAWNLMVDLLGKNWMYEPMWDAVRTM 116
Query: 188 DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGN 246
+ +S+AT ++ G++++A+ +F M KYGV++D ++ L+ + + N
Sbjct: 117 KQ--EDMLSMATFVSVFGSYCMAGKFNEAIMSFYVMDKYGVQQDVVVVNSLLTAICHEEN 174
Query: 247 SVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEM-FQQGFSPDVVSYT 305
A + F + K IP ++ F IL+ GW K V A+ EM + G+SP+ +S
Sbjct: 175 QTAKALEFFDKIKLKIPPNADTFAILLEGWEKEGDVAKAKTTFGEMVIKVGWSPENMS-- 232
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
Y + L + Q +EA+K MK
Sbjct: 233 --------------------------------AYDSFLTTLVRGSQADEAVKFLRVMKGK 260
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
+CLP F+S+ + +L K A +++ M G++PN++ YN MI C ++ +NA
Sbjct: 261 NCLPGLKFFSNALDMLVKQNDSTHAIPLWDIMVGSGLLPNLIMYNAMIGLHCNNNDVDNA 320
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
+LL +M + PD T+ + + + K++ + M KN+ ++ +
Sbjct: 321 FRLLDEMVFNGAFPDFLTFNIIFRCLIKNKKVHRVGKFFYEMIKNESPPTHFDCSAAIMT 380
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LI+ G E+A + ++ ++P + L
Sbjct: 381 LIDGGDPEMAIEIWNYIVENHVLPLDGSANAL 412
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 83/203 (40%), Gaps = 1/203 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+++ + + LVRG + D+AV+ R MK + S +D LVK N HA ++
Sbjct: 230 NMSAYDSFLTTLVRGSQADEAVKFLRVMKGKNCLPGLKFFSNALDMLVKQNDSTHAIPLW 289
Query: 256 LEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
L + I +N +I C VD+A + + EM G PD +++ +
Sbjct: 290 DIMVGSGLLPNLIMYNAMIGLHCNNNDVDNAFRLLDEMVFNGAFPDFLTFNIIFRCLIKN 349
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
K +V EM + P+ + + L A++++ + + LP
Sbjct: 350 KKVHRVGKFFYEMIKNESPPTHFDCSAAIMTLIDGGDPEMAIEIWNYIVENHVLPLDGSA 409
Query: 375 SSLIFILSKAGRVKDANEIFEDM 397
++L+ GR+ EDM
Sbjct: 410 NALLIGFCNLGRMSQVRRFAEDM 432
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 159/314 (50%), Gaps = 3/314 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ +TI++ LV+ GR+++A++ MK G+ D + ++ K +E
Sbjct: 476 NIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYL 535
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+E K P + + IHG+C+ ++ A+++ EM G +P+ V T I+ YC+
Sbjct: 536 VEMIAKGLKP-NVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCK 594
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + K + M ++G P V T+++++H L K ++ EA+ V+ ++ +PD
Sbjct: 595 DGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFT 654
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+SLI L K G +K A E+ +DM K+G+ PN++TYN +I+ C E A +L +
Sbjct: 655 YTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIP 714
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E + TY+ ++ C+ + L M V D+ Y +L+ G ++G E
Sbjct: 715 EKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTE 774
Query: 494 LACSFFEEMISKGI 507
A S F M+ +GI
Sbjct: 775 KALSLFLGMVEEGI 788
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 194/412 (47%), Gaps = 21/412 (5%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN---NGYVS 196
DL A F+ T G + YN +++ K + +EL+ E+ + N N Y+
Sbjct: 387 DLEKAEDLFS-EMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMC 445
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
A I+ L G A E F+ M +G++ + + ++ LVK E A K+
Sbjct: 446 GA----IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILG 501
Query: 257 EFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
KD LS +F N +I G+CK K+++ + + EM +G P+V +Y FI YCR
Sbjct: 502 VMKD-QGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRA 560
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + + + EM + G P+ + T ++ K +A + M LPD +
Sbjct: 561 GEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTH 620
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S LI LSK G++++A +F ++ +G+VP+V TY ++IS+ C +E LK ++ +
Sbjct: 621 SVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLC----KEGDLKAAFELHD 676
Query: 435 DLCK----PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
D+CK P+ TY L+ C+ + L + + ++ ++ TY++++ G +S
Sbjct: 677 DMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSA 736
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKE 542
L A F M G+ P Y L + K GN ++ ++ L +E
Sbjct: 737 NLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKA--GNTEKALSLFLGMVEE 786
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/360 (25%), Positives = 153/360 (42%), Gaps = 36/360 (10%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FK 259
+T++ R R + M G++ D A + L++ VK + + A++V E F
Sbjct: 306 ATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFA 365
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY-------- 311
I L++ + LIHG CK ++ A+ EM G PD+ +Y C IE Y
Sbjct: 366 RKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEK 425
Query: 312 ---------------------------CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
C D + ++ +EM G KP+++ YT ++
Sbjct: 426 AYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVK 485
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
L K + EA+K+ MK PD Y+++I KAG++++ +M +G+ P
Sbjct: 486 GLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKP 545
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
NV TY I C E + A + +M + P+ L+ C+
Sbjct: 546 NVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKF 605
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M V D T++ L+ GL ++GKL+ A F E++ KG+VP TY L L K+
Sbjct: 606 RCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKE 665
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 181/418 (43%), Gaps = 23/418 (5%)
Query: 146 GFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMR 205
GFF W ++T + ++ + +L S F +++ M + N +V +
Sbjct: 92 GFFNWVNSRTVFSQNLSTFSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCY 151
Query: 206 RLVRG--------------------GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
+ + G G ++AV F G K + L L+KG
Sbjct: 152 KEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKG 211
Query: 246 NSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
N VE +KV+ I + LI+ +C+ KV++ + + +M ++G P++V+Y+
Sbjct: 212 NRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYS 271
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I CR D + + + M KG P Y ++ + K+ E + ++M +
Sbjct: 272 VVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTM 331
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
PD Y++LI K + A ++ E+M + + N TY +I C + E A
Sbjct: 332 GLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKA 391
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L +M KPD +TY L++ + + M+ LL + K +++ +A ++V G
Sbjct: 392 EDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNG 451
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
L G L A F+EMIS G+ P Y + + L K+ G +E I K+L K+Q
Sbjct: 452 LCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKE--GRFEEAI-KILGVMKDQ 506
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 164/361 (45%), Gaps = 39/361 (10%)
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
N V LA +++ + L++G R + + ++GM + D + L++ + VE
Sbjct: 192 NEFIVGLACCNSLSKDLLKGNRVELFWKVYKGMLG-AIVPDVYTYTNLINAYCRVGKVEE 250
Query: 251 AYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
V +E K CIP + ++++I G C+ VD+A + + M +G PD Y I
Sbjct: 251 GKHVLFDMEEKGCIP-NLVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLI 309
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+ +CR+K + L EM G KP + YT +++ K I A +V E+M +
Sbjct: 310 DGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIK 369
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
+T Y +LI L K G ++ A ++F +M G+ P++ TYN +I E A +L
Sbjct: 370 LNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYEL 429
Query: 429 LQKMEED---------------LC--------------------KPDCETYAPLLKMCCR 453
L +++++ LC KP+ Y ++K +
Sbjct: 430 LIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVK 489
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+ R + +L M +S D Y +++ G ++GK+E S+ EMI+KG+ P T
Sbjct: 490 EGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYT 549
Query: 514 Y 514
Y
Sbjct: 550 Y 550
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 90/406 (22%), Positives = 170/406 (41%), Gaps = 41/406 (10%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
L A F AKT ++ N++ L K + L W++ K M L + T
Sbjct: 179 LNEAVSVFLGAKTNE-FIVGLACCNSLSKDLLKGNRVELFWKVYKGM--LGAIVPDVYTY 235
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY--KVFLEF 258
+ ++ R G+ ++ M++ G + SV++ L + V+ A K +
Sbjct: 236 TNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSMAN 295
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY------- 311
K +P + I+ LI G+C+ ++ + + + EM+ G PD V+YT I +
Sbjct: 296 KGLLP-DNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIG 354
Query: 312 ----------------------------CREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
C+ D K +D EM G KP + TY ++
Sbjct: 355 GAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLI 414
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
K + + +A ++ ++K ++ + +++ L G + ANE+F++M G+
Sbjct: 415 EGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLK 474
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
PN++ Y T++ E A+K+L M++ PD Y ++ C+ +M+
Sbjct: 475 PNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSY 534
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
L M + + TY + + G +G+++ A F EM+ GI P
Sbjct: 535 LVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAP 580
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 138/289 (47%), Gaps = 3/289 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ L K + EL + E S+ T STI+ + +A + F GM
Sbjct: 690 YNALINGLCKLGEIAKARELFDGIPEKGLARNSV-TYSTIIAGYCKSANLTEAFQLFHGM 748
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
K GV D+ L+D K + E A +FL + S+ FN LI G+ K K+
Sbjct: 749 KLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLI 808
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+A + +++M +P+ V+YT IE++C + ++ + EMQ++ P+V+TYT ++
Sbjct: 809 EAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLL 868
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
H + + +E ++++M + PD +S ++ K G A ++ +DM +GV
Sbjct: 869 HGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVN 928
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
Y +I + C + LK+L ++E+ K T L+ CC
Sbjct: 929 VCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLV--CC 975
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/368 (24%), Positives = 147/368 (39%), Gaps = 41/368 (11%)
Query: 196 SLATMSTIMRRLVRG----GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
+A I L+ G G A FR M GV D + SVL+ L K ++ A
Sbjct: 577 GIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEA 636
Query: 252 YKVFLEFKDCIPLSSQIFNI--LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
VF E D L +F LI CK + A + +M ++G +P++V+Y I
Sbjct: 637 MGVFSELLD-KGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALIN 695
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
C+ + K + + EKG + +TY+ ++ K+ + EA +++ MK P
Sbjct: 696 GLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPP 755
Query: 370 DTSFYSSLIFILSKAGRVKDANEIF----------------------------------E 395
D+ Y +LI KAG + A +F E
Sbjct: 756 DSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVE 815
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
DM + PN +TY +I C + A +L +M++ P+ TY LL R
Sbjct: 816 DMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIG 875
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
R + L M + D ++ +V ++ G A ++M+S+G+ + Y
Sbjct: 876 RRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYT 935
Query: 516 MLEEKLEK 523
+L + L K
Sbjct: 936 ILIDALCK 943
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 143/312 (45%), Gaps = 8/312 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + ++ L + G A E F G+ + G+ +++ S ++ K ++ A+++F
Sbjct: 686 NIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLF 745
Query: 256 LEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
K +P S ++ LI G CK + A M ++G + ++ I+ + +
Sbjct: 746 HGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA-STPAFNALIDGFFKL 804
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ +++M + P+ +TYTI++ I EA +++ +M+ + +P+ Y
Sbjct: 805 GKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTY 864
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+SL+ ++ GR + +F++M +G+ P+ L ++ M+ + ALKL+ M
Sbjct: 865 TSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLS 924
Query: 435 ---DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
++CK Y L+ C+ + + +L + K + T +LV +G+
Sbjct: 925 EGVNVCK---NLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGR 981
Query: 492 LELACSFFEEMI 503
+ A E M+
Sbjct: 982 TDEALRVLESMV 993
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/363 (26%), Positives = 180/363 (49%), Gaps = 8/363 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ + ++++EM E + T T++ + GR D+AV+ F M
Sbjct: 188 YNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEM 247
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-----CIPLSSQIFNILIHGWCK 278
G + + +V+ + L+ G + L ++D + ++ +N+L+H
Sbjct: 248 LTKG---EVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFM 304
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ +A + ++EM +G + DV +Y I +C+E + +K + + M +G + +V+T
Sbjct: 305 DGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVT 364
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT +++AL K Q+ E K++++ PD Y++LI S +G + A EI +M+
Sbjct: 365 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 424
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
K+ + P+ +TYNT++ C + A KL+ +M + +PD TY L+ K +K
Sbjct: 425 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 484
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
+ M + TY +L++GL ++G+ + A + +EM+ GI P STY L
Sbjct: 485 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544
Query: 519 EKL 521
E L
Sbjct: 545 EGL 547
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 178/375 (47%), Gaps = 8/375 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N M+ L + K EL+++M N T +T++ GR A++ R M
Sbjct: 157 FNIMLRHLCSAGKPARALELLRQMPRPNA-----VTYNTVIAGFCSRGRVQAALDIMREM 211
Query: 224 K-KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
+ + G+ + ++ K V+ A KVF E K + + ++N LI G+C
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 271
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+D A M ++G + V +Y + + + + ++EM KG V TY
Sbjct: 272 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYN 331
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ K + +AL+++E M Y+SLI+ LSK G+V++ +++F++ ++
Sbjct: 332 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 391
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+++ YN +I+S + A +++ +ME+ PD TY L++ C R+
Sbjct: 392 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 451
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L+ M K + D TY +L+ G G ++ A EM++KG P TY L +
Sbjct: 452 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 511
Query: 521 LEKKRLGNAKERINK 535
L K G+ E + K
Sbjct: 512 LCKNGQGDDAENMVK 526
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 140/298 (46%), Gaps = 11/298 (3%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
MK + T +L L+ L A+ +F + F+ +PL + FNI++ C K
Sbjct: 114 MKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLRHLCSAGK 169
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GCKPSVITYT 340
A + +++M + P+ V+Y I +C + D ++EM+E+ G P+ TY
Sbjct: 170 PARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYG 225
Query: 341 IVMHALGKAKQINEALKVYEKMKS-DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
V+ K +++EA+KV+++M + + P+ Y++LI G++ A + M +
Sbjct: 226 TVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVE 285
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+GV V TYN ++ + A +L+++M D TY L+ C++ +K
Sbjct: 286 RGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKK 345
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ +M + V TY SL+ L + G+++ F+E + +GI P Y L
Sbjct: 346 ALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNAL 403
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 128/281 (45%), Gaps = 18/281 (6%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG--- 210
+ G T YN +V L + +ELV+EM G LA L+ G
Sbjct: 285 ERGVAMTVATYNLLVHALFMDGRGTEAYELVEEM-----GGKGLALDVFTYNILINGHCK 339
Query: 211 -GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQI 268
G A+E F M + GV + L+ L K V+ K+F E + I +
Sbjct: 340 EGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVL 399
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC---REKDFRKVDDTLK 325
+N LI+ + +D A + M EM ++ +PD V+Y + C R + RK+ D
Sbjct: 400 YNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLID--- 456
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM ++G +P ++TY ++ + +AL++ +M + P Y++LI L K G
Sbjct: 457 EMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNG 516
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+ DA + ++M + G+ P+ TY ++I +E+E A+
Sbjct: 517 QGDDAENMVKEMVENGITPDDSTYISLIEGLT--TEDERAI 555
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 81/171 (47%), Gaps = 23/171 (13%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YN +++ S +E++ EM++ + T +T+MR L GR D+A +
Sbjct: 399 LYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDV-TYNTLMRGLCLLGRVDEARKLIDE 457
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-----------FNI 271
M K G++ D LV N++ Y + + KD + + +++ +N
Sbjct: 458 MTKRGIQPD----------LVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNA 507
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
LI G CK + DDA+ +KEM + G +PD +Y IE E D R +DD
Sbjct: 508 LIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTE-DERAIDD 557
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
+L++Y +MKS T+ L+ L A A +F DM + + T+N M+
Sbjct: 107 SLRLYSRMKSLSLPISTASLHPLLSALPSA----PAFALFADMFRLRLPLCTTTFNIMLR 162
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK-VLNFLLTHMFKNDVS 473
C+ + AL+LL++M +P+ TY ++ C + R++ L+ + + ++
Sbjct: 163 HLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIA 218
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ TY +++ G + G+++ A F+EM++KG V
Sbjct: 219 PNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEV 253
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 112/390 (28%), Positives = 190/390 (48%), Gaps = 14/390 (3%)
Query: 131 EQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDEL 190
E+ +RR ++ L G G+ + NT++ L K + L K+M L
Sbjct: 141 EEEIRRVADFLNEISGM--------GFGFSLYSCNTLLIQLAKFEMVEGARNLYKQM--L 190
Query: 191 NNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE 249
N+G SL T +T++ L + G+ +A + +Y + D + L+ + +++
Sbjct: 191 NSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLD 250
Query: 250 HAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
A+ VF + + C P +S ++ LI+G C +VD+A ++EM ++G P V +YT
Sbjct: 251 LAFGVFDRMVKEGCDP-NSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLP 309
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I C + + + + M+++GC+P+V TYT ++ L + ++ A+ +Y KM +
Sbjct: 310 ITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGL 369
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
+P+T Y++LI L GR A +IF M+ G + N TYN +I C + E A+
Sbjct: 370 VPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMV 429
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L +KM + P TY L+ K + LL M +N D TY LV G
Sbjct: 430 LFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFS 489
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ GKLE A +F+EM+ G+ P +Y L
Sbjct: 490 KWGKLESASFYFQEMVECGLNPNPVSYTAL 519
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 112/434 (25%), Positives = 192/434 (44%), Gaps = 52/434 (11%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL---GKSKKFCLMWELVKEMDELNN 192
RFS A F W + G + + YN ++ L G +K +++E + +M L
Sbjct: 388 RFST----ALKIFHWMEGH-GSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLP- 441
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
++ T +T++ + G ++A MK+ G E D + L+ K +E A
Sbjct: 442 ---TVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESAS 498
Query: 253 KVFLEFKDCI----PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
F E +C P+S + LI G K KVD A +K M + G +P+V SY I
Sbjct: 499 FYFQEMVECGLNPNPVS---YTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+E F + + +M E+G P+VITYT ++ L + + A K++ M+ CL
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 615
Query: 369 PDTSFYSSLIFILS-------------------------------KAGRVKDANEIFEDM 397
P+ YSSLI+ L + GR +A ++ +DM
Sbjct: 616 PNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 675
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
K++G P+ Y +++ + C E ++ALK+ +E + Y L+ C+ ++
Sbjct: 676 KERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQV 735
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ L +M + + + D + LV GL++ G+L+L M SK P TY +L
Sbjct: 736 EEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVIL 795
Query: 518 EEKLEKKRLGNAKE 531
+L R+G + E
Sbjct: 796 GREL--SRIGKSIE 807
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 185/423 (43%), Gaps = 49/423 (11%)
Query: 157 YMHTPEMYNTMVDVLGKSKK------FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
Y +P+++ +LG + F + +VKE + N+ T ST++ L
Sbjct: 227 YDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNS-----VTYSTLINGLCNE 281
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQI 268
GR D+A++ M + G+E ++ + L E A ++ K C P + Q
Sbjct: 282 GRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRP-NVQT 340
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE---------------HY-- 311
+ LI G + K++ A +M ++G P+ V+Y I H+
Sbjct: 341 YTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWME 400
Query: 312 ------------------CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
C D K ++M + G P+V+TY +++ +N
Sbjct: 401 GHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVN 460
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
A ++ + MK + C PD Y+ L+ SK G+++ A+ F++M + G+ PN ++Y +I
Sbjct: 461 NAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALI 520
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ + AL LL++MEE C P+ E+Y ++ ++ R + M + +
Sbjct: 521 DGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLL 580
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ TY +L+ GL +G+ + A F +M + +P TY L L ++ + ER+
Sbjct: 581 PNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERM 640
Query: 534 NKL 536
+++
Sbjct: 641 SEI 643
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/247 (20%), Positives = 106/247 (42%), Gaps = 6/247 (2%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ G + Y T++D L ++ + +++ +M++ +L T S+++ L + G+
Sbjct: 575 VEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEK-RKCLPNLYTYSSLIYGLCQEGK 633
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNI 271
D+A M + G E S L+ L + A ++ + K+ +I+
Sbjct: 634 ADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYS 689
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+ CK +VD A K + +GF + Y I C+ + M EK
Sbjct: 690 LLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKE 749
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
I +T+++ L K +++ +K+ M+S + P+ Y L LS+ G+ ++
Sbjct: 750 WNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESE 809
Query: 392 EIFEDMK 398
+ + +K
Sbjct: 810 PLADKLK 816
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/368 (27%), Positives = 176/368 (47%), Gaps = 4/368 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G++ YN M+ L +K L ++ ++ L+N ++ T + ++ + G ++
Sbjct: 177 GFLPDIVTYNIMIGSLCNRRKLGLALTVLDQL-LLDNCMPTVITYTILIEATIVEGGINE 235
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILI 273
A++ M G+ D + ++ + K VE A ++ L K C P +NIL+
Sbjct: 236 AMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEP-DVISYNILL 294
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+ K D+ +K + EMF +G P+ V+Y+ I CR + LK M EK
Sbjct: 295 RAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELT 354
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P +Y ++ AL K +++ A+ + + M S+ CLPD Y++++ L K G A EI
Sbjct: 355 PDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEI 414
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
F ++ G PNV +YNTMIS+ + + AL ++ M PD TY L+ CR
Sbjct: 415 FNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCR 474
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
++ LL M ++ +Y ++ GL + +++ A F EMI KG P +T
Sbjct: 475 DGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETT 534
Query: 514 YKMLEEKL 521
Y +L E +
Sbjct: 535 YILLIEGI 542
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/335 (26%), Positives = 164/335 (48%), Gaps = 1/335 (0%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
++ R + G++++++ + G D + L+ ++E A +V +
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHT 143
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+N +I G+CK +++ A + + M +GF PD+V+Y I C +
Sbjct: 144 EPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALT 203
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L ++ C P+VITYTI++ A INEA+K+ E+M + LPD Y+++I +
Sbjct: 204 VLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMC 263
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K G V+ A E+ + +G P+V++YN ++ + + + + KL+ +M C+P+
Sbjct: 264 KEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKV 323
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY+ L+ CR R+ +L M + +++ D +Y L+ L + G+L+LA + M
Sbjct: 324 TYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYM 383
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGN-AKERINKL 536
IS G +P Y + L K N A E NKL
Sbjct: 384 ISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 418
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 143/307 (46%), Gaps = 7/307 (2%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + I+R + + G + A E + G E D + ++L+ + + K+ E
Sbjct: 254 TYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEM 313
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ C P + ++ILI C+ ++D+A +K M ++ +PD SY I C+E
Sbjct: 314 FSRGCEP-NKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGR 372
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ M GC P ++ Y ++ AL K N+AL+++ K++ C P+ S Y++
Sbjct: 373 LDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNT 432
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L G A + M +G+ P+ +TYN++IS C E A+ LL ME+
Sbjct: 433 MISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSG 492
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG----KL 492
+P +Y +L C+ +R+ + M + + TY L+ G+ +G +
Sbjct: 493 FRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEAM 552
Query: 493 ELACSFF 499
ELA S F
Sbjct: 553 ELANSLF 559
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/455 (22%), Positives = 209/455 (45%), Gaps = 55/455 (12%)
Query: 129 LVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKS----KKFCLMWELV 184
L+ + L N A FF WA+ QTG+ + Y+ ++D+L ++ +C+M ++V
Sbjct: 49 LLVRVLNTVRNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVV 108
Query: 185 K------EMDELNNGYVSLATMSTIMRRLV------------------------------ 208
+D +++ VS+ ++ I+ L+
Sbjct: 109 SVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVKN 168
Query: 209 ----------RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
R D A E + M + G+ + ++D+ K V+ A ++ +
Sbjct: 169 CNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQM 228
Query: 259 K--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ C P + +N+L++G + +++ A++ +++M + G V +Y I YC +
Sbjct: 229 QAMGCSP-NDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQ 287
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ +EM +G P+V+TY +M+ L K ++++A K+ + M + + +PD Y++
Sbjct: 288 IEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNT 347
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI+ ++ G + +A +F +++ + + P+V+TYNT+I C + + A++L +M +
Sbjct: 348 LIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHG 407
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD T+ ++ C+ + + L M + D Y + + G ++ G A
Sbjct: 408 PDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAF 467
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
EEM+++G P TY + + L K LGN KE
Sbjct: 468 GMQEEMLARGFPPDLITYNVFIDGLHK--LGNLKE 500
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 162/347 (46%), Gaps = 6/347 (1%)
Query: 190 LNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
L+ G V ++ T +TIM L + GR DA + M + D + + L+ + ++
Sbjct: 299 LSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNI 358
Query: 249 EHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
A+ +F L ++ P S +N LI G C+ +D A + EM + G PDV ++T
Sbjct: 359 GEAFLLFAELRYRSLAP-SVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTT 417
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
F+ +C+ + + EM +G +P Y + K ++A + E+M +
Sbjct: 418 FVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARG 477
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
PD Y+ I L K G +K+A+E+ + M G+VP+ +TY ++I + A
Sbjct: 478 FPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKAR 537
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
L +M P TY L+ + R+K+ M + V + TY +L+ GL
Sbjct: 538 ALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGL 597
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ K++ A +FF EM +KGI P TY +L E LG+ +E +
Sbjct: 598 CKVRKMDQAYNFFAEMQAKGISPNKYTYTILIN--ENCNLGHWQEAL 642
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 145/313 (46%), Gaps = 4/313 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T +T++ L R G D A+ M K+G + D + + K ++ A ++F
Sbjct: 376 SVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELF 435
Query: 256 LEFKDCIPLSSQIFNIL--IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E + L F + I G K A +EM +GF PD+++Y FI+ +
Sbjct: 436 DEMLNR-GLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHK 494
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ ++ + +K+M G P +TYT ++HA A + +A ++ +M S P
Sbjct: 495 LGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVT 554
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ LI + GR+K A F +M ++GV PNV+TYN +I+ C + + A +M+
Sbjct: 555 YTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQ 614
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
P+ TY L+ C + L M ++ D+ T+ SL++ L + KL
Sbjct: 615 AKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLH 674
Query: 494 LACSFFEEMISKG 506
+ E +I+ G
Sbjct: 675 VV-RHLENVIAAG 686
>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
gi|223945505|gb|ACN26836.1| unknown [Zea mays]
Length = 462
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 186/401 (46%), Gaps = 43/401 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ L +K++ EL++EM N+ + + T +T +R + G D AVE M
Sbjct: 10 YNTVLKGLCCAKQWEQAEELMREMIR-NSCHPNEVTFATQIRAFCQNGLLDRAVELLEQM 68
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---------------------------- 255
KYG D S L++ + V+ A K+
Sbjct: 69 PKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEV 128
Query: 256 ------LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+ KDC P + F+ LI+ C+ R V+ A + +++M + G+ PDVVSY I
Sbjct: 129 GELIAEMVRKDCPP-NDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIIS 187
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
+ D + DD LK ++ CKP I++ V+ L KAK+ +A+++ KM DC
Sbjct: 188 CF---SDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRI 244
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ ++ LI L + G+VKDA E+FE M K +P+++TY+++I+ + +E A L
Sbjct: 245 NEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLF 304
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ M C+ D +Y LK C R L+ M D + T+ L+ L +
Sbjct: 305 RSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQK 361
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNA 529
G + A +E+M GI P TY L E+ RL +A
Sbjct: 362 GLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA 402
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 160/319 (50%), Gaps = 15/319 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
++T+++ L +++ E++++M + GY+ + + +TI+ R DDA++ +
Sbjct: 147 FSTLINSLCQNRLVEYAVEVLEQMQKY--GYMPDVVSYNTIISCFSDQARADDALKLLKS 204
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M + DT + + ++ L K A ++ + KDC ++ FNILI C+
Sbjct: 205 ML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDC-RINEMTFNILIDSLCQNG 260
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+V DA + + M + PD+V+Y+ I + + D + M C+ + +Y
Sbjct: 261 QVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYN 317
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+ L A + ++A ++ M ++DCLP+ ++ LI L + G V A +++E M K
Sbjct: 318 ATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKY 377
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P++ TYN +I+ + ++ALK L M C+PD +Y +LK CR +R K
Sbjct: 378 GITPDIFTYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDA 434
Query: 461 NFLLTHMFKNDVSMDAGTY 479
L+T M + + + + T+
Sbjct: 435 EKLVTEMLRKNCTPNEVTF 453
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 114/241 (47%), Gaps = 7/241 (2%)
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+PD +Y ++ C K + + ++ ++EM C P+ +T+ + A + ++ A++
Sbjct: 4 APDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVE 63
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ E+M C PD YS+L+ S+ GRV +A ++ M + PN + YN + C
Sbjct: 64 LLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLC 120
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E +L+ +M C P+ T++ L+ C+ + ++ +L M K D
Sbjct: 121 IAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 180
Query: 478 TYASLVRGLIESGKLELACSFFEEMISK-GIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
+Y +++ + + + A + M+ K + +++ K L + KR +A E + K+
Sbjct: 181 SYNTIISCFSDQARADDALKLLKSMLCKPDTISFNAVLKCL---CKAKRWYDAVELVAKM 237
Query: 537 L 537
L
Sbjct: 238 L 238
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V P+ TYNT++ C + E A +L+++M + C P+ T+A ++ C+ +
Sbjct: 3 VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK-GIVPYHSTYKML 517
LL M K + D Y++LV G E G+++ A M+ + V Y++ K L
Sbjct: 63 ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGL 119
>gi|124365553|gb|ABN09787.1| Pentatricopeptide repeat [Medicago truncatula]
Length = 200
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 123/189 (65%), Gaps = 5/189 (2%)
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+V+TYT +M AL KA++ +EAL+V E+M + C PDT F++S I+ + +AGR+ DA I
Sbjct: 10 PNVVTYTTIMCALAKAEKFDEALQVVERMNAVGCRPDTLFFNSFIYTMGRAGRIDDATHI 69
Query: 394 FE-DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED-LCKPDCET-YAPLLKM 450
F+ M K V PN TYN+MIS C +++E A +L++ME+ LCKPD +T Y PL+K
Sbjct: 70 FKVAMPKASVAPNTSTYNSMISMFCYYAQKERAFDILKEMEKSGLCKPDIQTYYHPLIKS 129
Query: 451 CCRKKRMKV-LNFLLTHMF-KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C + +++ LN +L+ M K + +D TY L+ GL + + + A + FEEM+ + I+
Sbjct: 130 CFKMRKVDTWLNDILSDMVNKYHIGLDLSTYTLLIHGLCRADRCKWAFNLFEEMVDQDIM 189
Query: 509 PYHSTYKML 517
P + T ++L
Sbjct: 190 PRYKTCRLL 198
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 88/183 (48%), Gaps = 12/183 (6%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE---HAY 252
++ T +TIM L + ++D+A++ M G DT + + T+ + ++ H +
Sbjct: 11 NVVTYTTIMCALAKAEKFDEALQVVERMNAVGCRPDTLFFNSFIYTMGRAGRIDDATHIF 70
Query: 253 KVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS-PDVVSYTCFIEHY 311
KV + P ++ +N +I +C + + A +KEM + G PD+ +Y +
Sbjct: 71 KVAMPKASVAP-NTSTYNSMISMFCYYAQKERAFDILKEMEKSGLCKPDIQTYYHPLIKS 129
Query: 312 CREKDFRKVD----DTLKEMQEK-GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
C + RKVD D L +M K + TYT+++H L +A + A ++E+M D
Sbjct: 130 CFK--MRKVDTWLNDILSDMVNKYHIGLDLSTYTLLIHGLCRADRCKWAFNLFEEMVDQD 187
Query: 367 CLP 369
+P
Sbjct: 188 IMP 190
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/380 (28%), Positives = 179/380 (47%), Gaps = 45/380 (11%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFR 221
+YNT++D L K K L EMD N G + T S+++ L GR+ DA
Sbjct: 260 IYNTIIDGLCKYKHMDDALNLFTEMD--NKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF----------------------- 258
M + + + S L+D VK + A K++ E
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377
Query: 259 --------------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
KDC P + ++ LI G+CK ++V++ + +EM Q+G + V+Y
Sbjct: 378 RLDEAKHMFELMISKDCFP-NVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTY 436
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
T I + + +D K+M G P+++TY I++ L K ++ +A+ V+E ++
Sbjct: 437 TTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQR 496
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
PD Y+ +I + KAG+V+D E+F ++ +GV PNV+ YNTMIS C + +E
Sbjct: 497 STMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEE 556
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A LL+KM+ED P+ TY L++ R + L+ M + DA T LV
Sbjct: 557 ADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVT 615
Query: 485 GLIESGKLELACSFFEEMIS 504
++ G+L+ + F +M+S
Sbjct: 616 NMLHDGRLDKS---FLDMLS 632
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/373 (26%), Positives = 167/373 (44%), Gaps = 22/373 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ + K KF L+ L ++M L + L T S + R + A+ M
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISH-DLYTYSIFINCFCRRSQLSLALAVLAKM 144
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-----------FNIL 272
K G E D LS L+ N H+ ++ D + L Q+ F L
Sbjct: 145 MKLGYEPDIVTLSSLL------NGYCHSKRI----SDAVALVDQMVEMGYKPDTFTFTTL 194
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
IHG K +A + +M Q+G PD+V+Y + C+ D LK+M++
Sbjct: 195 IHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKI 254
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+ V+ Y ++ L K K +++AL ++ +M + PD YSSLI L GR DA+
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ DM ++ + PNV+T++ +I + + A KL +M + PD TY+ L+ C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
R+ + M D + TY++L++G ++ ++E F EM +G+V
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434
Query: 513 TYKMLEEKLEKKR 525
TY L + R
Sbjct: 435 TYTTLIHGFFQAR 447
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 174/371 (46%), Gaps = 6/371 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G H Y+ ++ + + L ++ +M +L GY + T+S+++ R
Sbjct: 113 GISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKL--GYEPDIVTLSSLLNGYCHSKRIS 170
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNIL 272
DAV M + G + DT + L+ L N A + + + C P + +
Sbjct: 171 DAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP-DLVTYGTV 229
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
++G CK +D A +K+M + DVV Y I+ C+ K + EM KG
Sbjct: 230 VNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGI 289
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+P V TY+ ++ L + ++A ++ M P+ +S+LI K G++ +A +
Sbjct: 290 RPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEK 349
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
++++M K+ + P++ TY+++I+ C + A + + M C P+ TY+ L+K C
Sbjct: 350 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFC 409
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ KR++ L M + + + TY +L+ G ++ + A F++M+S G+ P
Sbjct: 410 KAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNIL 469
Query: 513 TYKMLEEKLEK 523
TY +L + L K
Sbjct: 470 TYNILLDGLCK 480
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/328 (25%), Positives = 155/328 (47%), Gaps = 6/328 (1%)
Query: 196 SLATMSTIMRRLVRGG-----RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
S A+ S R ++R + DDAV+ F M K + L+ + K N E
Sbjct: 42 SFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFEL 101
Query: 251 AYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+ + + I ++I I+ +C+ ++ A + +M + G+ PD+V+ + +
Sbjct: 102 VISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLN 161
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
YC K + +M E G KP T+T ++H L + +EA+ + ++M C P
Sbjct: 162 GYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQP 221
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D Y +++ L K G + A + + M+K + +V+ YNT+I C ++AL L
Sbjct: 222 DLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLF 281
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M+ +PD TY+ L+ C R + LL+ M + ++ + T+++L+ ++
Sbjct: 282 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKE 341
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKML 517
GKL A ++EMI + I P TY L
Sbjct: 342 GKLVEAEKLYDEMIKRSIDPDIFTYSSL 369
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 146/301 (48%), Gaps = 2/301 (0%)
Query: 248 VEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
V+ A +F + P S + FN L+ K K + ++M G S D+ +Y+
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
FI +CR L +M + G +P ++T + +++ +K+I++A+ + ++M
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
PDT +++LI L + +A + + M ++G P+++TY T+++ C R + + AL
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
LL+KME+ + D Y ++ C+ K M L T M + D TY+SL+ L
Sbjct: 244 SLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCL 303
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAKEQKT 545
G+ A +MI + I P T+ L + K+ +L A++ ++++ + +
Sbjct: 304 CNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDI 363
Query: 546 F 546
F
Sbjct: 364 F 364
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 14/229 (6%)
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G P V S+ C E+ F +E I+ + L ++++A
Sbjct: 22 GNPPTVPSFFNLCGSGCWERSFASASGDYRE--------------ILRNRLSDIIKVDDA 67
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+ ++ M P ++ L+ ++K + + + E M+ G+ ++ TY+ I+
Sbjct: 68 VDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINC 127
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C RS+ AL +L KM + +PD T + LL C KR+ L+ M + D
Sbjct: 128 FCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
T+ +L+ GL K A + ++M+ +G P TY + L K+
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
>gi|297739643|emb|CBI29825.3| unnamed protein product [Vitis vinifera]
Length = 722
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 172/381 (45%), Gaps = 3/381 (0%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
F FF W + + + +N ++D+L K F W++++E+ +N + T S +
Sbjct: 80 GFRFFIWTTRRRSF-RSWVTHNLVIDMLAKDDGFDTYWKILEELKN-SNIQIPPPTFSVL 137
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCI 262
+ + G + AVE+F MK +G + D + ++ +V+ A V+ + K
Sbjct: 138 IAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNY 197
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+ F IL++G CK K DDA K EM Q+G P+ + YT + C+ K V
Sbjct: 198 NPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHR 257
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L M+ GC P IT ++ K QI+EA + + + + + YSSLI L
Sbjct: 258 LLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLF 317
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
+A R + E M K G+ P+V+ Y +I C + AL +L M + PD
Sbjct: 318 RAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTY 377
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y L+K C + L + KND + TY L+ G+ +G L+ A F +M
Sbjct: 378 CYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQM 437
Query: 503 ISKGIVPYHSTYKMLEEKLEK 523
+ G P T+ L + L K
Sbjct: 438 ENLGCSPSIMTFNALIDGLCK 458
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 146/328 (44%), Gaps = 21/328 (6%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE- 257
T + ++ + G+ D+A + +K G + S L+D L + + + +
Sbjct: 273 TCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKM 332
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
FK I ++ ILI G+C+ VD A + +M Q+G SPD Y I+ +C
Sbjct: 333 FKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLL 392
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
K E+ + C P+ TYTI++ + + ++EA +++ +M++ C P +++L
Sbjct: 393 DKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNAL 452
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR-----------SEEENAL 426
I L KAG +++A +F M+ G P++ +S R EE+A
Sbjct: 453 IDGLCKAGELEEARHLFYKMEI-GKNPSLFLR---LSQGADRVMDTANGFHRVDREEDAF 508
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
++L +M ++ C P Y L+ CRK ++ V L ++ S + T L
Sbjct: 509 RVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETL-KLAEEH 567
Query: 487 IESGKLELACSFFEEMISK----GIVPY 510
E G+LE A EM K I PY
Sbjct: 568 FEKGELEKAVRCLLEMNFKLNNFEIAPY 595
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 150/370 (40%), Gaps = 65/370 (17%)
Query: 193 GYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
GYV + S+++ L R RYD+ E R M K G+E D ++L+ + V++A
Sbjct: 301 GYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYA 360
Query: 252 YKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+ + + + + +N LI G+C +D A+ E+ + P +YT I
Sbjct: 361 LNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICG 420
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
CR + +M+ GC PS++T+ ++ L KA ++ EA ++ KM +
Sbjct: 421 MCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKM-------E 473
Query: 371 TSFYSSLIFILSKAG--------------RVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
SL LS+ R +DA + + M K G P+ Y +++ +
Sbjct: 474 IGKNPSLFLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWS 533
Query: 417 CAR------------------SEEENALKL----------------LQKMEEDLCKPDCE 442
C + S+E+ LKL L +M L +
Sbjct: 534 CRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIA 593
Query: 443 TYAPLLKMCCRKKR----MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
Y L C+ +R +K+ FL+ + DV + + L+ GL + G LE+A
Sbjct: 594 PYTIWLIGLCQARRSEEALKI--FLVLKECQMDV--NPPSCVMLINGLCKDGNLEMAVDI 649
Query: 499 FEEMISKGIV 508
F + KG +
Sbjct: 650 FLYTLEKGFM 659
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 137/330 (41%), Gaps = 59/330 (17%)
Query: 153 TQTGYMHTPEMYNTMV----DVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLV 208
TQ G YN ++ DV K L E+ K N+ + + T + ++ +
Sbjct: 368 TQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISK-----NDCFPTSCTYTILICGMC 422
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
R G D+A + F M+ G + L+D L K +E A +F + + I + +
Sbjct: 423 RNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKME--IGKNPSL 480
Query: 269 FNIL----------IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE---- 314
F L +G+ + + +DA + + +M + G +P Y C + CR+
Sbjct: 481 FLRLSQGADRVMDTANGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLS 540
Query: 315 -------KDFRKV----DDTLK-------------------EMQEKGCKPSVITYTIVMH 344
K R + D+TLK EM K + YTI +
Sbjct: 541 VAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTIWLI 600
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI--LSKAGRVKDANEIFEDMKKQGV 402
L +A++ EALK++ +K +C D + S ++ I L K G ++ A +IF ++G
Sbjct: 601 GLCQARRSEEALKIFLVLK--ECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGF 658
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKM 432
+ N ++ S + + ++AL LL +M
Sbjct: 659 MLMPRICNQLLRSLILQDKMKHALDLLNRM 688
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 102/400 (25%), Positives = 184/400 (46%), Gaps = 20/400 (5%)
Query: 145 FGFFTW--AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST 202
F FFTW + + + HT Y TM+ L + L++ + + A +T
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAT 60
Query: 203 IMRR-----------------LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
I+ + G DA+E +R +++ + +++ L+K
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 246 NSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+ + + E +C P S FNIL+H +CK + AQ + + G P VVSY
Sbjct: 121 RYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ Y R D + M G +P V TY+++++ L K ++++A +++++M
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLV 240
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
+P+ +++LI K GRV A EI++ M Q ++P+++TYNT+I C + + +
Sbjct: 241 KGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A L+ +M KPD TY L+ CC++ + M + ++ +D Y +L+
Sbjct: 301 AHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALIS 360
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
GL + G+ A EM+S G+ P TY M+ + KK
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKK 400
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 126/255 (49%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K + ++ A ++F
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K IP + F LI G CK +VD A + K M Q PD+++Y I C+
Sbjct: 236 DEMLVKGLIP-NGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCK 294
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ + EM KG KP TYT ++ K ++ A K ++M + D
Sbjct: 295 KGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVA 354
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P++ TY +I+ C + + KLL++M+
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 434 EDLCKPDCETYAPLL 448
+ P TY L+
Sbjct: 415 RNGHVPSVVTYNVLM 429
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 144/317 (45%), Gaps = 4/317 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K + F L+W +E+ L GY SL + +M R + G A F + K+G+
Sbjct: 117 LMKLRYFKLVWGFYEEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLR 174
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKV-FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
+ + LM+ ++ ++ +++ + +++LI+G CK K+DDA +
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANEL 234
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
EM +G P+ V++T I +C+ + K M + P +ITY +++ L K
Sbjct: 235 FDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCK 294
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
+ +A + ++M PD Y++LI K G + A + + M + + + +
Sbjct: 295 KGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVA 354
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y +IS C +A K+L++M KPD TY ++ C+K + + LL M
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 469 KNDVSMDAGTYASLVRG 485
+N TY L+ G
Sbjct: 415 RNGHVPSVVTYNVLMNG 431
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 185/405 (45%), Gaps = 20/405 (4%)
Query: 144 AFGFFTWAKTQTGY--MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL--AT 199
A F W Q G H MY +L K++ + +++ + ++ G S+ A
Sbjct: 844 ALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGAL 903
Query: 200 MST-------------IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
M T ++R ++ G D AVE F + G + ++++ ++VK
Sbjct: 904 MDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDK 963
Query: 247 SVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
E + +F E D I + FNILI+G C + A +K+M + GF P +V+Y
Sbjct: 964 RTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYN 1023
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
+ YC++ ++ + + M KG + V TY + + L + +A + +KM+ +
Sbjct: 1024 TLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKE 1083
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
P+ Y++LI K G++ A ++F +M K + PN +TYN +I C + E A
Sbjct: 1084 MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEA 1143
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L+LL ME + + TY LL C+ ++ ++ LL M ND+ + Y L+ G
Sbjct: 1144 LRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDG 1203
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
L ++G L+ A M G+ P TY L R+GN K
Sbjct: 1204 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGF--CRVGNIK 1246
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 189/411 (45%), Gaps = 40/411 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N +++ L L+K+M+E NG+V ++ T +T++ + GRY A+E
Sbjct: 987 FNILINGLCVEGNLKKAGNLLKQMEE--NGFVPTIVTYNTLLNWYCKKGRYKAAIELIDY 1044
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M G+E D +V +D L + AY + + K+ I + +N LI+G+ K K
Sbjct: 1045 MICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGK 1104
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ A + EM + SP+ V+Y I +C DF + L M+ G + + +TY
Sbjct: 1105 IGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGT 1164
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ L K ++ A ++ E+M+ +D + Y+ LI L K G + +A ++ +M K G
Sbjct: 1165 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 1224
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEE---------------DLCKP------- 439
V P+V+TY+++I+ C ++A +++ +M + C+
Sbjct: 1225 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 1284
Query: 440 ------DCETYAP-------LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+C + L+ CR ++ L HM + + ++ TY ++ G
Sbjct: 1285 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 1344
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
G A SFF++MI G P TY L + L K L AK+ +N+L
Sbjct: 1345 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL 1395
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 167/367 (45%), Gaps = 12/367 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG----GRYDDAVEA 219
YNT+++ K K + ++ EM + + L+ L+ G G +++A+
Sbjct: 1092 YNTLINGFVKEGKIGVAAQVFNEMSKFD-----LSPNCVTYNALIGGHCHVGDFEEALRL 1146
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWC 277
M+ G+ + L++ L K E A ++ + D + + + +LI G C
Sbjct: 1147 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMV-VGHIAYTVLIDGLC 1205
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K +D+A + + M++ G +PDV++Y+ I +CR + + + + M G + I
Sbjct: 1206 KNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKI 1265
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y+ +++ + + EA+KVY M + D + L+ L + G++ +A + M
Sbjct: 1266 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 1325
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ G+VPN +TY+ +I+ + + NA M + P TY LLK C+ +
Sbjct: 1326 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 1385
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + ++D+ Y +L+ +SG L A + F++M+ ++P TY L
Sbjct: 1386 VEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 1445
Query: 518 EEKLEKK 524
L +K
Sbjct: 1446 LTGLCRK 1452
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 184/479 (38%), Gaps = 109/479 (22%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+++ L K +KF L L++ M +N+ V + ++ L + G D+AV+ M
Sbjct: 1162 YGTLLNGLCKHEKFELAKRLLERM-RVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNM 1220
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIF------------- 269
K GV D S L++ + +++ A ++ ++ + L+ I+
Sbjct: 1221 YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNV 1280
Query: 270 ----------------------NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
N+L+ C+ K+ +A+K + M + G P+ ++Y C
Sbjct: 1281 TEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCI 1340
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK------------------- 348
I Y D +M + G PS TY ++ L K
Sbjct: 1341 INGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPG 1400
Query: 349 ----------------AKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL----------- 381
+ ++EA+ +++KM ++ LPD+ YSSL+ L
Sbjct: 1401 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVC 1460
Query: 382 -------------------------SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
SKAG K A FE+M K+G P+ + +N +I S
Sbjct: 1461 LFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSC 1520
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
R + A M P+ TY LL +K+ + L + M + + D
Sbjct: 1521 SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDK 1580
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERIN 534
T+ SL+ GL +SG +L +MI +G + T+ +L K E ++ A + +N
Sbjct: 1581 LTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVN 1639
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 4/317 (1%)
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
G V +T++ + G +AV F M + V D+ S L+ L + A
Sbjct: 1400 GAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV 1459
Query: 253 KVF---LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+F + P + ++ L+ G K A +EM ++G PD V++ I+
Sbjct: 1460 CLFGTAMGRGTLFP-NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIID 1518
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
R K +D M+ G P++ TY I++H K + + L +Y M + P
Sbjct: 1519 SCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFP 1578
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D + SLI LSK+G ++ M +G + + T+N +I+ + A L+
Sbjct: 1579 DKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLV 1638
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
M PD +TY + +K + +L M +N V Y +L+ G+
Sbjct: 1639 NFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRV 1698
Query: 490 GKLELACSFFEEMISKG 506
G ++ A +EM + G
Sbjct: 1699 GDIQGAFKLKDEMEALG 1715
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 129/313 (41%), Gaps = 4/313 (1%)
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP--LSSQIFNIL 272
+A F M K G L+ L KG ++ A K FL IP + S ++N L
Sbjct: 1352 NAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKK-FLNRLHYIPGAVDSVMYNTL 1410
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE-KDFRKVDDTLKEMQEKG 331
+ CK+ + +A +M Q PD +Y+ + CR+ K V M
Sbjct: 1411 LAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGT 1470
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P+ + YT ++ L KA A +E+M PDT ++++I S+ G++ AN
Sbjct: 1471 LFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAN 1530
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ F M+ GV PN+ TYN ++ + L L M + PD T+ L+
Sbjct: 1531 DFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGL 1590
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
+ + LL M D T+ L+ ESGK+ A M + G+ P
Sbjct: 1591 SKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDR 1650
Query: 512 STYKMLEEKLEKK 524
TY + L KK
Sbjct: 1651 DTYNHIFNGLNKK 1663
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FNILI+ + ++ K+ A + M G PD +Y ++ FR+ L EM
Sbjct: 1618 FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 1677
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E G P Y +++ + + I A K+ ++M++ S+++ L G+ +
Sbjct: 1678 ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 1737
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
DA + + M + ++P + T+ T++ C ++ ALKL ME K D Y L+
Sbjct: 1738 DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1797
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C L M D+ + TYA LV + + L ++ +G++
Sbjct: 1798 MGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1857
Query: 509 PYHSTYKMLEEKL 521
+ + + L+++L
Sbjct: 1858 SWGGSTQHLDKEL 1870
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 135/326 (41%), Gaps = 11/326 (3%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
N++++ RR + A FF+ T + P + + + G SKK L+ L
Sbjct: 1514 NAIIDSCSRR--GQMMKANDFFS---TMRWWGVCPNLATYNILLHGFSKKQALLRYLSLY 1568
Query: 187 MDELNNG-YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
+ G + T +++ L + G D V+ M G D ++L++ +
Sbjct: 1569 STMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSES 1628
Query: 246 NSVEHAYKV--FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
+ A+ + F+ P +N + +G K ++ + EM + G P
Sbjct: 1629 GKMRKAFDLVNFMNTLGVFP-DRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQ 1687
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y I CR D + EM+ G + + ++ L + +A+ V + M
Sbjct: 1688 YITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHML 1747
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
LP + +++L+ + ++ +A ++ M+ G+ +V+ YN +I CA +
Sbjct: 1748 RMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSA 1807
Query: 424 NALKLLQKM-EEDLCKPDCETYAPLL 448
A +L ++M DLC P+ TYA L+
Sbjct: 1808 AAFELYEEMRHRDLC-PNITTYAVLV 1832
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 96/330 (29%), Positives = 161/330 (48%), Gaps = 3/330 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T+ST+++ + G+ DA+E F M + G + D L++ L K A ++
Sbjct: 8 NLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELH 67
Query: 256 LEFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
I S F ++I CK K +EM G P+V+ Y+ I CR
Sbjct: 68 RRMLSEI-CSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCR 126
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
R+ + EM +G K +VITY ++HA + EA + + +M + LPD
Sbjct: 127 VGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVT 186
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+++LI LSK G+V++A +IFE M KQG PN++TYN++++ C + ++A++L + M
Sbjct: 187 FTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMV 246
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E K D +Y L+ C + + L M +++ TY L++ L ++G++
Sbjct: 247 ERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIR 306
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
A F M G P TY +L + L K
Sbjct: 307 TAKELFNNMQICGQSPSLDTYTVLLDGLCK 336
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 157/311 (50%), Gaps = 2/311 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF- 255
+ T +T++ L + G+ +A + F M K G + + L++ L + ++HA ++F
Sbjct: 184 VVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFE 243
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ + I + +N LI+G+C + K ++A ++M + +P + +YT ++ +
Sbjct: 244 VMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNG 303
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
R + MQ G PS+ TYT+++ L K I EA+ V+ +KS P YS
Sbjct: 304 RIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYS 363
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
LI + +A R + A EIF+++ G+VPN++TYN MI+ C + A +L +MEE
Sbjct: 364 ILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEES 423
Query: 436 LCKPDCETYAPLLKMCCRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C+ D ++ +++ ++ ++ K + FL KN D+ T + ++ EL
Sbjct: 424 GCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSEL 483
Query: 495 ACSFFEEMISK 505
+F E++ K
Sbjct: 484 PNNFLHELVQK 494
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 170/358 (47%), Gaps = 6/358 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAF 220
+Y+++++ L + K + E V DE+ + + ++ T ++++ R G + +A F
Sbjct: 116 VYSSLINGLCRVGK---LREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTF 172
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKT 279
M G+ D + L+D L K V+ AYK+F L K + +N L++G C
Sbjct: 173 SQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLH 232
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++D A + + M ++G DV+SY I YC + ++MQ + PS+ TY
Sbjct: 233 HQMDHAVRLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTY 292
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
TI++ AL + +I A +++ M+ P Y+ L+ L K G +++A ++F +K
Sbjct: 293 TILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKS 352
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
P++ Y+ +I E+A+++ ++ P+ TY ++ C++ ++
Sbjct: 353 IKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLE 412
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M ++ D ++ ++RG ++ +++ A F + M K P S ML
Sbjct: 413 AERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLML 470
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%)
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G +P+++T + ++ + ++ +AL++++KM D Y LI L K + + A
Sbjct: 4 GYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRA 63
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+ M + N TY +I S C LK+ ++M P+ Y+ L+
Sbjct: 64 VELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLING 123
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
CR +++ L M + + TY SL+ G + A F +M+ +GI+P
Sbjct: 124 LCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPD 183
Query: 511 HSTYKMLEEKLEKK 524
T+ L + L KK
Sbjct: 184 VVTFTTLIDHLSKK 197
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 179/355 (50%), Gaps = 2/355 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+T+++ + + +L++EM ++ +L T ++I+ L + G+ DDA R M
Sbjct: 13 YSTVINGYCLGGELQKVLKLIQEM-QMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREM 71
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
G+ DT + L+D K +++ AYK+F E K I + +I G C+ K+
Sbjct: 72 INQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKM 131
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A K +MF +G PD V+YT I+ YC+ + K +M + G P+V+TYT +
Sbjct: 132 MEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTAL 191
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
L K Q++ A ++ +M + Y+SL+ L K+G ++ A ++ E+M+ G+
Sbjct: 192 ADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGM 251
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+ +T+ T++ + C E A +LL++M + +P T+ L+ C ++
Sbjct: 252 YPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGER 311
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + + + TY SL++ + ++ M ++G++P +TY +L
Sbjct: 312 LLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNIL 366
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 153/323 (47%), Gaps = 3/323 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ + ST++ GG ++ + M+ G++ + + ++ L K V+ A +V
Sbjct: 10 VVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLR 69
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E + +P + ++ LI G+CK + A K EM +Q PD ++YT I CR
Sbjct: 70 EMINQGIVP-DTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRC 128
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ D +M +G +P +TYT ++ K+ ++ +A ++ +M P+ Y
Sbjct: 129 GKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTY 188
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++L L K G+V ANE+ +M +G+ N+ TYN++++ C A+KL+++ME
Sbjct: 189 TALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEV 248
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD T+ L+ C+ M + LL M + T+ L+ G SG LE
Sbjct: 249 AGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLED 308
Query: 495 ACSFFEEMISKGIVPYHSTYKML 517
M+ KGI+P +TY L
Sbjct: 309 GERLLAWMLEKGIMPNTTTYNSL 331
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 128/239 (53%), Gaps = 2/239 (0%)
Query: 295 QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
+G +PDVVSY+ I YC + +KV ++EMQ KG KP++ TY ++ L K+ ++++
Sbjct: 4 RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A +V +M + +PDT Y++LI K G ++ A ++F++M+KQ +VP+ + Y +I
Sbjct: 64 AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C + A K+ KM +PD TY L+ C+ M+ L M ++ ++
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ TY +L GL + G+++ A EM KG+ TY L L K GN ++ +
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKS--GNIRQAV 240
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 103/197 (52%)
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M+ +G P V++Y+ V++ ++ + LK+ ++M+ P+ Y+S+I +L K+G+
Sbjct: 1 MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
V DA + +M QG+VP+ + Y T+I C + A KL +ME+ PD Y
Sbjct: 61 VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++ CR +M + + MF V D TY +L+ G +SG++E A S +M+ G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180
Query: 507 IVPYHSTYKMLEEKLEK 523
+ P TY L + L K
Sbjct: 181 LTPNVVTYTALADGLCK 197
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 145/307 (47%), Gaps = 1/307 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T +T++ + G + A M + G+ + + L D L K V+ A ++ E
Sbjct: 151 VTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHE 210
Query: 258 F-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ L+ +N L++G CK+ + A K M+EM G PD +++T ++ YC+ +
Sbjct: 211 MCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGE 270
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
K + L+EM ++G +P+VIT+ ++M+ + + + ++ M +P+T+ Y+S
Sbjct: 271 MVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNS 330
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ ++ EI++ M +GV+P+ TYN +I C + A L ++M E
Sbjct: 331 LMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKG 390
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+Y ++K +KK++ L M + ++ DA Y V G +E A
Sbjct: 391 FNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETAL 450
Query: 497 SFFEEMI 503
+E I
Sbjct: 451 ELCDEAI 457
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 141/300 (47%), Gaps = 5/300 (1%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VS 196
S ++ AF Q+G Y + D L K + EL+ EM G ++
Sbjct: 163 SGEMEKAFSLHNQM-VQSGLTPNVVTYTALADGLCKLGQVDTANELLHEM--CGKGLQLN 219
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T ++++ L + G AV+ M+ G+ DT + LMD K + A+++
Sbjct: 220 ICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLR 279
Query: 257 EFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E D + + FN+L++G+C + ++D ++ + M ++G P+ +Y ++ YC
Sbjct: 280 EMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRN 339
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ R + K M +G P TY I++ KA+ + EA ++++M S Y+
Sbjct: 340 NMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYN 399
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
S+I K ++ +A E+FE+M+++G+ + YN + + E AL+L + E+
Sbjct: 400 SIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIEN 459
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 165/326 (50%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
A + ++ R R G++++++ + G + D + L+ +++ A +V
Sbjct: 63 AHLMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEI 122
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ +N +I G+ K ++D A + M +GFSPDVV+Y I C
Sbjct: 123 LETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKL 182
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + E+ + GCKPSVITYTI++ A +INEAL++++++ S PD Y+++
Sbjct: 183 ELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAI 242
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + K G A + + +G P+V++YN ++ S +S E+ +L++ M C
Sbjct: 243 IRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGC 302
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
+P+ T++ L+ CR+ R++ +L M + ++ D+ +Y L+ + G+L+LA
Sbjct: 303 EPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIE 362
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
+ E+M+S G +P Y + L K
Sbjct: 363 YLEKMVSDGCLPDIVNYNTILATLCK 388
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 120/488 (24%), Positives = 227/488 (46%), Gaps = 26/488 (5%)
Query: 79 NEKSRISSRVLSENHETDVDKISKILSKQYQSPD-----KVVEALKGCG---VSVSNSLV 130
NE V+S+ + DV +K++ + S + +V+E L+ G V N+++
Sbjct: 79 NESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMI 138
Query: 131 EQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDEL 190
+ +N + A F +++ G+ YN M+ L K L +E++ E+ L
Sbjct: 139 SGFSK--ANQIDSANQVFDRMRSR-GFSPDVVTYNIMIGSLCSRGKLELAFEVMDEL--L 193
Query: 191 NNG-YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE 249
+G S+ T + ++ + GR ++A+E F + G+ D + ++ + K +
Sbjct: 194 KDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMED 253
Query: 250 HA--YKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
A + L + C P +NIL+ + + +D ++ MK+M G P+VV+++
Sbjct: 254 RALDFVRHLSARGCNP-DVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSIL 312
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I +CRE R+ + L+ M+EKG P +Y ++ A K +++ A++ EKM SD C
Sbjct: 313 ISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGC 372
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
LPD Y++++ L K G A ++FE + + G P V YNTM S+ + + AL+
Sbjct: 373 LPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALE 432
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
++ +M PD TY L+ CR + LL M ++ ++ G+
Sbjct: 433 MISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMC 492
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-------EKKRLGNAKERINKLLAHA 540
++ ++ M+ KG +P ++Y +L E + E L N+ R+ + +
Sbjct: 493 KAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGVISGDS 552
Query: 541 KEQ--KTF 546
++ KTF
Sbjct: 553 SKRLNKTF 560
>gi|326500578|dbj|BAK06378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 546
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/437 (26%), Positives = 194/437 (44%), Gaps = 34/437 (7%)
Query: 118 LKGCGVSVSNSL---VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKS 174
L+ G+S +L + Q+L PA WA + V +L
Sbjct: 43 LRASGISPDPALFPHLRQSLTTLPESAFPALA--RWAGSAAA-----------VSLLASR 89
Query: 175 KKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF----RGMKKYGVEK 230
F W L+ ++ LA + ++RR R GR A+ AF R +Y V+
Sbjct: 90 GLFAASWRLLL-FQPPSSPPPPLAAFAPLVRRYARLGRSSAALRAFHFLRRNPDRYTVDG 148
Query: 231 D-----TRALSVLMDTLVKGNSVEHAYKVFLEFKDC-----IPLSSQIFNILIHGWCKTR 280
D T L++ + L K A K+ K C + + +N+L+ GW R
Sbjct: 149 DASPAATSLLNMAVGALCKEGHPRPAAKLV---KRCRREGELAPDERTYNMLLDGWSTAR 205
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++D K EM G P VVSY I+ CR + + L EM+++G + +++T
Sbjct: 206 RMDKVGKLWAEMCVAGVRPTVVSYGTLIKAVCRVQQPDQAVSLLDEMRKEGIEANLVTCN 265
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++HAL A + +A + EK P+ S ++SL+ K G + A+ + + M +
Sbjct: 266 PIVHALAHAGRFRDAYNLLEKFPLYGVAPNISTFNSLVLAYCKYGDLAGASGVLKAMMGR 325
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G++P TYN E + L KM + PD TY L+KM C R++++
Sbjct: 326 GILPTAKTYNYFFVFFAKTGNVELGMNLYNKMVNNGYAPDQTTYNLLVKMLCEANRLELV 385
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
++ M N D T L+ L S + E AC+ F++M +G VP + TY+ML ++
Sbjct: 386 VQMIKEMRANGFESDLATSTMLIHLLCRSHRFEEACAEFKDMFRRGHVPQYITYRMLMKE 445
Query: 521 LEKKRLGNAKERINKLL 537
L++ L +E++ L+
Sbjct: 446 LKRLGLVELEEKLTDLM 462
>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
Length = 684
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 166/334 (49%), Gaps = 15/334 (4%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T ++R L R + D+A + + V V+++T+++G E
Sbjct: 284 SVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNV--------VMLNTVIRGCLAEGKLARA 335
Query: 256 LEF------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
E K C P +NIL+HG CK + A + + EM ++G +P++V+Y+ +
Sbjct: 336 TELYEMMGSKGCPP-DVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLH 394
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
+CR + L +M KG + Y +++ALGK +++EA+++ ++MKS C P
Sbjct: 395 SFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKP 454
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D Y+++I+ L ++ +A IF ++ ++GVV N +TYNT+I + + L+L
Sbjct: 455 DICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLA 514
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M C D +Y L+K C++ + LL M + + +Y L+ L ++
Sbjct: 515 NEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKA 574
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
GK+ A +EM+++G+ P TY L L K
Sbjct: 575 GKVRDALELSKEMLNQGLTPDIVTYNTLINGLCK 608
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 146/356 (41%), Gaps = 38/356 (10%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE- 257
T R L R GR DA+ RGM ++G D ++ LV V A + E
Sbjct: 182 TFGVAARALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEM 241
Query: 258 -FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR--- 313
C FN ++ G C V +A + + M G +P VV+Y + CR
Sbjct: 242 LLMGCAA-DVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQ 300
Query: 314 ----------------------------EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
E + + + M KGC P V TY I+MH
Sbjct: 301 ADEAYAMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHG 360
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
L K + A+++ ++M+ C P+ YS+L+ + G DA + + M +G N
Sbjct: 361 LCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMN 420
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
YN +I + + + A++L+Q+M+ CKPD TY ++ C +M +
Sbjct: 421 SQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFG 480
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG----IVPYHSTYKML 517
++ + V + TY +L+ L+ SG+ + EM+ G +V Y+ K L
Sbjct: 481 NLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKAL 536
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 158/325 (48%), Gaps = 3/325 (0%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
V++ ++T++R + G+ A E + M G D ++LM L K A ++
Sbjct: 314 VNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRM 373
Query: 255 F--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+E K C P + ++ L+H +C+ DDA+ + +M +GFS + Y I
Sbjct: 374 LDEMEEKGCAP-NIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALG 432
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
++ + ++EM+ +GCKP + TY +++ L Q++EA ++ + + + +
Sbjct: 433 KDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGI 492
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y++LI L +GR ++ + +M G +V++YN +I + C + ++ LL++M
Sbjct: 493 TYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEM 552
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
KP+ +Y L+ C+ +++ L M ++ D TY +L+ GL + G
Sbjct: 553 MTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 612
Query: 493 ELACSFFEEMISKGIVPYHSTYKML 517
A + E++ ++ + P TY +L
Sbjct: 613 HAALNLLEKLPNENVHPDIVTYNIL 637
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 155/327 (47%), Gaps = 4/327 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++ L K + ++ EM+E ++ T ST++ R G +DDA M
Sbjct: 354 YNILMHGLCKLGRCGSAVRMLDEMEE-KGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQM 412
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
G +++ + ++ L K ++ A ++ E K C P +N +I+ C +
Sbjct: 413 SAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKP-DICTYNTIIYHLCNNDQ 471
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A+ + ++G + ++Y I +++ EM GC V++Y
Sbjct: 472 MDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNG 531
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ AL K ++ ++ + E+M + P+ Y+ LI L KAG+V+DA E+ ++M QG
Sbjct: 532 LIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQG 591
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+++TYNT+I+ C AL LL+K+ + PD TY L+ C+ + + +
Sbjct: 592 LTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAS 651
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIE 488
LL + + T+ +V+ +
Sbjct: 652 MLLDKAVSGGIVPNERTWGMMVQNFVR 678
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 136/328 (41%), Gaps = 36/328 (10%)
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL---EFKDCIPLSSQIFNILIHGWCKTR 280
+++ V R+ + ++ TL + + HA + L +D +P ++ F + C+
Sbjct: 137 RRFAVTPSFRSYNAVLSTLARADC--HADALLLYRRMLRDRVPPTTFTFGVAARALCRLG 194
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ DA ++ M + G PD V Y I + + L EM GC V T+
Sbjct: 195 RARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFN 254
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA----------GRVKDA 390
V+ L + EA ++ ++M C P Y L+ L + GRV +
Sbjct: 255 DVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEV 314
Query: 391 N---------------------EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
N E++E M +G P+V TYN ++ C +A+++L
Sbjct: 315 NVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRML 374
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+MEE C P+ TY+ LL CR +L M SM++ Y ++ L +
Sbjct: 375 DEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKD 434
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKML 517
GKL+ A +EM S+G P TY +
Sbjct: 435 GKLDEAMRLVQEMKSQGCKPDICTYNTI 462
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 140/284 (49%), Gaps = 6/284 (2%)
Query: 177 FCL--MWELVKEM-DELNNGYVSLATM--STIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
FC MW+ + M D+++ S+ + + I+ L + G+ D+A+ + MK G + D
Sbjct: 396 FCRNGMWDDARAMLDQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPD 455
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
+ ++ L + ++ A +F ++ + + +N LIH + + + +
Sbjct: 456 ICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLAN 515
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
EM G DVVSY I+ C+E + + L+EM KG KP+ +Y ++++ L KA
Sbjct: 516 EMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAG 575
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++ +AL++ ++M + PD Y++LI L K G A + E + + V P+++TYN
Sbjct: 576 KVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYN 635
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+IS C ++A LL K P+ T+ +++ R+
Sbjct: 636 ILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMMVQNFVRQ 679
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 117/262 (44%), Gaps = 4/262 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ + YN ++ LGK K LV+EM + T +TI+ L + D+
Sbjct: 416 GFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKS-QGCKPDICTYNTIIYHLCNNDQMDE 474
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILI 273
A F + + GV + + L+ L+ + ++ E C PL +N LI
Sbjct: 475 AEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGC-PLDVVSYNGLI 533
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
CK VD + ++EM +G P+ SY I C+ R + KEM +G
Sbjct: 534 KALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLT 593
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P ++TY +++ L K + AL + EK+ +++ PD Y+ LI K + DA+ +
Sbjct: 594 PDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASML 653
Query: 394 FEDMKKQGVVPNVLTYNTMISS 415
+ G+VPN T+ M+ +
Sbjct: 654 LDKAVSGGIVPNERTWGMMVQN 675
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 96/239 (40%), Gaps = 40/239 (16%)
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
PS +Y V+ L +A +AL +Y +M D P T + L + GR +DA +
Sbjct: 143 PSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRARDALAL 202
Query: 394 FEDMKKQGVVPNVLTYNTMISS-----------------------------------ACA 418
M + G VP+ + Y T+I + C
Sbjct: 203 LRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCAADVNTFNDVVLGLCG 262
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
A +L+ +M C P TY LL+ CR ++ +L + + +V M
Sbjct: 263 LGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAMLGRVPEVNVVM---- 318
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
+++RG + GKL A +E M SKG P TY +L L K R G+A ++++
Sbjct: 319 LNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRCGSAVRMLDEM 377
>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
Length = 671
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 115/401 (28%), Positives = 186/401 (46%), Gaps = 43/401 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ L +K++ EL++EM N+ + + T +T +R + G D AVE M
Sbjct: 219 YNTVLKGLCCAKQWEQAEELMREMIR-NSCHPNEVTFATQIRAFCQNGLLDRAVELLEQM 277
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---------------------------- 255
KYG D S L++ + V+ A K+
Sbjct: 278 PKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEV 337
Query: 256 ------LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+ KDC P + F+ LI+ C+ R V+ A + +++M + G+ PDVVSY I
Sbjct: 338 GELIAEMVRKDCPP-NDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIIS 396
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
+ D + DD LK ++ CKP I++ V+ L KAK+ +A+++ KM DC
Sbjct: 397 CF---SDQARADDALKLLKSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRI 453
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ ++ LI L + G+VKDA E+FE M K +P+++TY+++I+ + +E A L
Sbjct: 454 NEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLF 513
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ M C+ D +Y LK C R L+ M D + T+ L+ L +
Sbjct: 514 RSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQK 570
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNA 529
G + A +E+M GI P TY L E+ RL +A
Sbjct: 571 GLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDA 611
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 160/319 (50%), Gaps = 15/319 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
++T+++ L +++ E++++M + GY+ + + +TI+ R DDA++ +
Sbjct: 356 FSTLINSLCQNRLVEYAVEVLEQMQKY--GYMPDVVSYNTIISCFSDQARADDALKLLKS 413
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M + DT + + ++ L K A ++ + KDC ++ FNILI C+
Sbjct: 414 ML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDC-RINEMTFNILIDSLCQNG 469
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+V DA + + M + PD+V+Y+ I + + D + M C+ + +Y
Sbjct: 470 QVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CRADIFSYN 526
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+ L A + ++A ++ M ++DCLP+ ++ LI L + G V A +++E M K
Sbjct: 527 ATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKY 586
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P++ TYN +I+ + ++ALK L M C+PD +Y +LK CR +R K
Sbjct: 587 GITPDIFTYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGLCRAERWKDA 643
Query: 461 NFLLTHMFKNDVSMDAGTY 479
L+T M + + + + T+
Sbjct: 644 EKLVTEMLRKNCTPNEVTF 662
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 164/393 (41%), Gaps = 82/393 (20%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG----NSVEHA 251
++ + + ++++L R DA +K G A +V +TLV G S+ A
Sbjct: 115 AVISCNILIKKLCARRRLADAERVLEALKASGA-----ADAVSHNTLVAGYCRDGSLGDA 169
Query: 252 YKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
+V + + + LI G+C++ ++ DA + + M +PD +Y ++
Sbjct: 170 ERVVEAARASGTANVVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTVLKGL 226
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C K + + ++ ++EM C P+ +T+ + A + ++ A+++ E+M C PD
Sbjct: 227 CCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDV 286
Query: 372 SFYSSLIFILSKAGRVKDA--------------------------------NEIFEDMKK 399
YS+L+ S+ GRV +A E+ +M +
Sbjct: 287 IIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVR 346
Query: 400 QGVVPNVLTYNTMISSACA-----------------------------------RSEEEN 424
+ PN T++T+I+S C ++ ++
Sbjct: 347 KDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADD 406
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
ALKLL+ M LCKPD ++ +LK C+ KR L+ M K D ++ T+ L+
Sbjct: 407 ALKLLKSM---LCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILID 463
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L ++G+++ A FE M +P TY L
Sbjct: 464 SLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSL 496
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 102/225 (45%), Gaps = 16/225 (7%)
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM-----HALGKAKQIN 353
P V+S I+ C + + L+ ++ G +V T+V +LG A+++
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAADAVSHNTLVAGYCRDGSLGDAERVV 173
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EA + + Y++LI ++GR+ DA + M V P+ TYNT++
Sbjct: 174 EAARASGTA-------NVVTYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVL 223
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C + E A +L+++M + C P+ T+A ++ C+ + LL M K +
Sbjct: 224 KGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCT 283
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISK-GIVPYHSTYKML 517
D Y++LV G E G+++ A M+ + V Y++ K L
Sbjct: 284 PDVIIYSTLVNGFSEHGRVDEALKLLNTMLCRPNTVCYNAALKGL 328
>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g79540-like [Vitis vinifera]
Length = 798
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/381 (27%), Positives = 172/381 (45%), Gaps = 3/381 (0%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
F FF W + + + +N ++D+L K F W++++E+ +N + T S +
Sbjct: 80 GFRFFIWTTRRRSF-RSWVTHNLVIDMLAKDDGFDTYWKILEELKN-SNIQIPPPTFSVL 137
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCI 262
+ + G + AVE+F MK +G + D + ++ +V+ A V+ + K
Sbjct: 138 IAAYAKSGMAEKAVESFGKMKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNY 197
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+ F IL++G CK K DDA K EM Q+G P+ + YT + C+ K V
Sbjct: 198 NPNRATFVILLNGLCKNGKTDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHR 257
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L M+ GC P IT ++ K QI+EA + + + + + YSSLI L
Sbjct: 258 LLNTMKVSGCCPDSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLF 317
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
+A R + E M K G+ P+V+ Y +I C + AL +L M + PD
Sbjct: 318 RAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTY 377
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
Y L+K C + L + KND + TY L+ G+ +G L+ A F +M
Sbjct: 378 CYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQM 437
Query: 503 ISKGIVPYHSTYKMLEEKLEK 523
+ G P T+ L + L K
Sbjct: 438 ENLGCSPSIMTFNALIDGLCK 458
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 158/352 (44%), Gaps = 15/352 (4%)
Query: 193 GYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
GYV + S+++ L R RYD+ E R M K G+E D ++L+ + V++A
Sbjct: 301 GYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLYTILIRGFCEVGMVDYA 360
Query: 252 YKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+ + + + + +N LI G+C +D A+ E+ + P +YT I
Sbjct: 361 LNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFPTSCTYTILICG 420
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM-------- 362
CR + +M+ GC PS++T+ ++ L KA ++ EA ++ KM
Sbjct: 421 MCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEIGKNPSL 480
Query: 363 -----KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ D + DT+ +++ L ++G + A ++ + GVVP+++TYN +I+ C
Sbjct: 481 FLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFC 540
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
A KL ++++ PD TY L+ R R + +L M KN + +
Sbjct: 541 KAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSA 600
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNA 529
Y L+ GKL +A S + + + T K+ EE EK L A
Sbjct: 601 VYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKA 652
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 148/333 (44%), Gaps = 14/333 (4%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE- 257
T + ++ + G+ D+A + +K G + S L+D L + + + +
Sbjct: 273 TCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKM 332
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
FK I ++ ILI G+C+ VD A + +M Q+G SPD Y I+ +C
Sbjct: 333 FKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLL 392
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
K E+ + C P+ TYTI++ + + ++EA +++ +M++ C P +++L
Sbjct: 393 DKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNAL 452
Query: 378 IFILSKAGRVKDANEIFEDMK-----------KQGV--VPNVLTYNTMISSACARSEEEN 424
I L KAG +++A +F M+ QG V + + TM+ C
Sbjct: 453 IDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILK 512
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A KLL ++ + PD TY L+ C+ K + L + S D+ TY +L+
Sbjct: 513 AYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLID 572
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
G + E A ++M+ G P + YK L
Sbjct: 573 GFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCL 605
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 98/445 (22%), Positives = 180/445 (40%), Gaps = 102/445 (22%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG----G 211
GY+ + Y++++D L ++K++ + E ++M G + TI L+RG G
Sbjct: 301 GYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKM--FKAGIEPDVVLYTI---LIRGFCEVG 355
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIF 269
D A+ M + G+ DT + L+ ++ A + LE DC P +S +
Sbjct: 356 MVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISKNDCFP-TSCTY 414
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR----------- 318
ILI G C+ +D+A++ +M G SP ++++ I+ C+ +
Sbjct: 415 TILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEEARHLFYKMEI 474
Query: 319 ---------------KVDDT----------------------LKEMQEKGCKPSVITYTI 341
+V DT L ++ + G P ++TY +
Sbjct: 475 GKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNV 534
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ KAK IN A K++ +++ PD+ Y +LI + R +DA + + M K G
Sbjct: 535 LINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAFRVLDQMVKNG 594
Query: 402 VVPNVLTYNTMISSACAR------------------SEEENALKL--------------- 428
P+ Y +++ +C + S+E+ LKL
Sbjct: 595 CTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVR 654
Query: 429 -LQKMEEDLCKPDCETYAPLLKMCCRKKR----MKVLNFLLTHMFKNDVSMDAGTYASLV 483
L +M L + Y L C+ +R +K+ FL+ + DV + + L+
Sbjct: 655 CLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKI--FLVLKECQMDV--NPPSCVMLI 710
Query: 484 RGLIESGKLELACSFFEEMISKGIV 508
GL + G LE+A F + KG +
Sbjct: 711 NGLCKDGNLEMAVDIFLYTLEKGFM 735
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/273 (24%), Positives = 121/273 (44%), Gaps = 41/273 (15%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
A++ T++ RL G A + + GV D +VL++ K ++ A+K+F
Sbjct: 495 ASLQTMVERLCESGLILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRE 554
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE- 314
L+ K P S + LI G+ + + +DA + + +M + G +P Y C + CR+
Sbjct: 555 LQLKGHSP-DSVTYGTLIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKG 613
Query: 315 ----------KDFRKV----DDTLK-------------------EMQEKGCKPSVITYTI 341
K R + D+TLK EM K + YTI
Sbjct: 614 KLSVAFSLWLKYLRSLPSQEDETLKLAEEHFEKGELEKAVRCLLEMNFKLNNFEIAPYTI 673
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI--LSKAGRVKDANEIFEDMKK 399
+ L +A++ EALK++ +K +C D + S ++ I L K G ++ A +IF +
Sbjct: 674 WLIGLCQARRSEEALKIFLVLK--ECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLE 731
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
+G + N ++ S + + ++AL LL +M
Sbjct: 732 KGFMLMPRICNQLLRSLILQDKMKHALDLLNRM 764
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 170/333 (51%), Gaps = 3/333 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T ++ L + G D A+ M+ +E D + ++D+L K V+ A +F
Sbjct: 186 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 245
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+E K P + ++ LI C + DA + + +M ++ +P++V++ I+ + +
Sbjct: 246 KEMETKGIRP-NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 304
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E F + + +M ++ P + TY +++ ++++A +++E M S DC PD
Sbjct: 305 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 364
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI K+ RV+D E+F +M +G+V + +TY T+I + +NA K+ ++M
Sbjct: 365 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 424
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
D PD TY+ LL C +++ + +M K+++ +D Y +++ G+ ++GK++
Sbjct: 425 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 484
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
F + KG+ P TY + L KRL
Sbjct: 485 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 517
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 164/312 (52%), Gaps = 9/312 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T + ++ V+ G++ +A + + M K ++ D + L++ + ++ A ++F
Sbjct: 291 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 350
Query: 256 LEF---KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
EF KDC P +N LI G+CK+++V+D + +EM +G D V+YT I+
Sbjct: 351 -EFMVSKDCFP-DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 408
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ D K+M G P ++TY+I++ L ++ +AL+V++ M+ + D
Sbjct: 409 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 468
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+++I + KAG+V D ++F + +GV PNV+TYNTMIS C++ + A LL+KM
Sbjct: 469 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 528
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ED P+ TY L++ R L+ M DA T LV ++ G+L
Sbjct: 529 KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRL 587
Query: 493 ELACSFFEEMIS 504
+ + F +M+S
Sbjct: 588 DKS---FLDMLS 596
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 170/365 (46%), Gaps = 2/365 (0%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++NT++D L K + L KEM E ++ T S+++ L GR+ DA +
Sbjct: 224 IFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 282
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M + + + + L+D VK A K++ + K I +N L++G+C +
Sbjct: 283 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 342
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A++ + M + PDVV+Y I+ +C+ K + +EM +G +TYT
Sbjct: 343 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 402
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L + A KV+++M SD PD YS L+ L G+++ A E+F+ M+K
Sbjct: 403 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 462
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ ++ Y TMI C + ++ L + KP+ TY ++ C K+ ++
Sbjct: 463 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 522
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL M ++ ++GTY +L+R + G + EM S V ST ++ L
Sbjct: 523 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 582
Query: 522 EKKRL 526
RL
Sbjct: 583 HDGRL 587
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 165/359 (45%), Gaps = 2/359 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ + K KKF ++ L ++M L + L T + ++ R + A+ M
Sbjct: 50 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVH-GLYTYNILINCFCRRSQISLALALLGKM 108
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
K G E LS L++ G + A + + + I F LIHG K
Sbjct: 109 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 168
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A + M Q+G P++V+Y + C+ D + L +M+ + V+ + +
Sbjct: 169 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 228
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ +L K + +++AL ++++M++ P+ YSSLI L GR DA+++ DM ++ +
Sbjct: 229 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 288
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN++T+N +I + + A KL M + PD TY L+ C R+
Sbjct: 289 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 348
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ M D D TY +L++G +S ++E F EM +G+V TY L + L
Sbjct: 349 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 407
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 122/263 (46%), Gaps = 1/263 (0%)
Query: 263 PLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
PL S + FN L+ K +K D ++M + + +Y I +CR
Sbjct: 43 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 102
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L +M + G +PS++T + +++ K+I++A+ + ++M PDT +++LI L
Sbjct: 103 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 162
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+ +A + + M ++G PN++TY +++ C R + + AL LL KME + D
Sbjct: 163 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 222
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
+ ++ C+ + + L M + + TY+SL+ L G+ A +
Sbjct: 223 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 282
Query: 502 MISKGIVPYHSTYKMLEEKLEKK 524
MI K I P T+ L + K+
Sbjct: 283 MIEKKINPNLVTFNALIDAFVKE 305
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+DDA M + P +V + + + K F V ++MQ + TY
Sbjct: 27 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + QI+ AL + KM P SSL+ R+ DA + + M +
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+ +T+ T+I ++ A+ L+ +M + C+P+ TY ++ C++ +
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + D + +++ L + ++ A + F+EM +KGI P TY L
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 263
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%)
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++++A+ ++ M LP ++ L+ ++K + + E M++ +V + TYN
Sbjct: 27 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I+ C RS+ AL LL KM + +P T + LL C KR+ L+ M +
Sbjct: 87 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
D T+ +L+ GL K A + + M+ +G P TY ++ L K+
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 200
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 176/369 (47%), Gaps = 14/369 (3%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR--- 221
N+++ L + F M EL+++M E++ ++ T ++ + + R DDA+E
Sbjct: 309 NSLLTGLAREGNFNRMNELMEKMVEMDI-QPNVVTFGILINHMCKFRRVDDALEVLEKMS 367
Query: 222 GMKKYG-----VEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQIFNILI 273
G K+ G VE D + L+D L K + + K C P + +N LI
Sbjct: 368 GGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAP-DTITYNCLI 426
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G+CK +++ ++ EM ++G +P+VV+ + CR + E Q +G K
Sbjct: 427 DGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMK 486
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+TYT +++A +A++++ +M C PD Y +LI S+AGR+ DA+ +
Sbjct: 487 GDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFV 546
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
++KK G+ P+ + YNT+I C ++ ++L++MEE KPD TY L+ +
Sbjct: 547 LAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASK 606
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+K ++ M K V TY +++ +G A F++M + VP ++
Sbjct: 607 NGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTV 666
Query: 514 -YKMLEEKL 521
Y +L L
Sbjct: 667 IYNILINSL 675
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 168/358 (46%), Gaps = 15/358 (4%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE---MDELNNGYVS--LA 198
G ++Q G YN ++D FC E+ K DE+N V+ +
Sbjct: 402 GLGLMERMRSQKGCAPDTITYNCLID------GFCKAGEIEKGKELFDEMNKEGVAPNVV 455
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T++T++ + R GR AV F ++ G++ D + L++ N+ E A ++F E
Sbjct: 456 TVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEM 515
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
C P + ++ LI G+ + ++ DA + E+ + G PD V Y I +CR
Sbjct: 516 LKSGCSP-DAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNK 574
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
F +V + LKEM+E G KP ITY ++ K + A KV KM +P + Y +
Sbjct: 575 FHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGA 634
Query: 377 LIFILSKAGRVKDANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I G +A EIF+DMK V PN + YN +I+S C ++ ++A+ L++ M+
Sbjct: 635 VINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIW 694
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
P+ TY + K +K ++ + + M ++ + D T L L G++E
Sbjct: 695 GVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIE 752
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/409 (23%), Positives = 170/409 (41%), Gaps = 73/409 (17%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTR----ALSVLMDTLVKGN------SVEHAYKVFL 256
L+R GR DA++ M + + + R +L L+K S + + L
Sbjct: 200 LLRSGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVL 259
Query: 257 EFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+F + + +SS LI C+ RK + EM + G + + + RE
Sbjct: 260 KFGEHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREG 319
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD---------- 365
+F ++++ +++M E +P+V+T+ I+++ + K +++++AL+V EKM
Sbjct: 320 NFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSV 379
Query: 366 ----------------------------------DCLPDTSFYSSLIFILSKAGRVKDAN 391
C PDT Y+ LI KAG ++
Sbjct: 380 EPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGK 439
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
E+F++M K+GV PNV+T NT++ C +A+ + + K D TY L+
Sbjct: 440 ELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAF 499
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP-- 509
C + L M K+ S DA Y +L+ G ++G++ A E+ GI P
Sbjct: 500 CNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDT 559
Query: 510 ---------------YHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
+H ++ML+E +E+ L N L+A+A +
Sbjct: 560 VCYNTLIGGFCRTNKFHRVFEMLKE-MEEAGLKPDTITYNTLIAYASKN 607
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/314 (22%), Positives = 132/314 (42%), Gaps = 8/314 (2%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
V N+LV R + ++ A FF A+ + G Y +++ F E
Sbjct: 454 VVTVNTLVGGMCR--TGRVSSAVNFFVEAQRR-GMKGDAVTYTALINAFCNVNNFEKAME 510
Query: 183 LVKEMDELNNGYVSLATMS-TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
L EM L +G A + T++ + GR DA +KK G+ DT + L+
Sbjct: 511 LFNEM--LKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGG 568
Query: 242 LVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
+ N +++ E ++ + + +N LI K + AQK M++M + G P
Sbjct: 569 FCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPT 628
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINEALKVY 359
V +Y I YC + + + K+M+ P+ + Y I++++L K ++ A+ +
Sbjct: 629 VATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLM 688
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
E MK P+T+ Y+++ L ++ E + M + P+ +T + A
Sbjct: 689 EDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAV 748
Query: 420 SEEENALKLLQKME 433
E E K + E
Sbjct: 749 GEIERLKKFVAGCE 762
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 130/330 (39%), Gaps = 25/330 (7%)
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
EA + ++ G E +T L+ L+ T + ++F + +P SSQ L +
Sbjct: 51 EALQLLQIPGNEWNTTQLNQLLFT--DSPPSSSSPRLFYQITRRLPSSSQALKFLNYLQN 108
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ D Q + FQ F +C + K +E +V
Sbjct: 109 NSPSSPDTQSLLSYTFQAIFEL----------AFCEPDSNANLSRLYKTSKELNIPLTVN 158
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA----NEI 393
+ ++ A G+++ + E+L ++ + D + +T + + IL ++GRVKDA +E+
Sbjct: 159 AASFLLRASGRSELVEESLILFNDL--DPSVKNTYLRNVWLSILLRSGRVKDALKVIDEM 216
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENAL------KLLQKMEEDLCKPDCETYAPL 447
FE PN T + + S R E L L+ K E L
Sbjct: 217 FESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRL 276
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ CR ++ L T M K +++ SL+ GL G E+M+ I
Sbjct: 277 ITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDI 336
Query: 508 VPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
P T+ +L + K +R+ +A E + K+
Sbjct: 337 QPNVVTFGILINHMCKFRRVDDALEVLEKM 366
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 105/390 (26%), Positives = 176/390 (45%), Gaps = 46/390 (11%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G T Y T+VD + K L+++M+E+++ ++ S I+ L + GR+
Sbjct: 212 EDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRH 271
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
DA F M++ G+ D +N +I
Sbjct: 272 SDAQNLFTEMQEKGIFPDLFT----------------------------------YNSMI 297
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G+C + + DA++ ++EM ++ SPDVV+Y I + +E F + + EM +G
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 357
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ ITY ++ K +++ A ++ M + C PD +++LI A R+ D E+
Sbjct: 358 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 417
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+M ++G+V N +TYNT+I C + AL L Q+M PD T LL C
Sbjct: 418 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 477
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAG-----------TYASLVRGLIESGKLELACSFFEEM 502
++K + M K+ + +DA TY L+ GLI GK A +EEM
Sbjct: 478 NGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 537
Query: 503 ISKGIVPYHSTY-KMLEEKLEKKRLGNAKE 531
+GIVP TY M++ ++ RL A +
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 178/387 (45%), Gaps = 16/387 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+M+ S ++ +L++EM E + T + ++ V+ G++ +A E + M
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLE-RKISPDVVTYNALINAFVKEGKFFEAAELYDEM 351
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G+ +T + ++D K + ++ A +F + K C P F LI G+C ++
Sbjct: 352 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP-DVFTFTTLIDGYCGAKR 410
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DD + + EM ++G + V+Y I +C D D ++M G P ++T
Sbjct: 411 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 470
Query: 342 VMHAL---GKAKQINEALKVYEKMKSD--------DCLPDTSFYSSLIFILSKAGRVKDA 390
++ L GK K E K +K K D PD Y+ LI L G+ +A
Sbjct: 471 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 530
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E++E+M +G+VP+ +TY++MI C +S + A ++ M P+ T+ L+
Sbjct: 531 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING 590
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ R+ L M + + DA Y +L+ G + G + A F+EMIS G+ P
Sbjct: 591 YCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPD 650
Query: 511 HSTYK-MLEEKLEKKRLGNAKERINKL 536
T + ML K+ L A + L
Sbjct: 651 TITIRNMLTGFWSKEELERAVAMLEDL 677
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 133/271 (49%), Gaps = 1/271 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FNILI +C K+ A ++ + G PDVV++T + C E + D +M
Sbjct: 117 FNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMF 176
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E C+P+V+T+T +M+ L + +I EA+ + ++M D P Y +++ + K G
Sbjct: 177 ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTV 236
Query: 389 DANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A + M++ ++PNV+ Y+ +I S C +A L +M+E PD TY +
Sbjct: 237 SALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSM 296
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C R LL M + +S D TY +L+ ++ GK A ++EM+ +GI
Sbjct: 297 IVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGI 356
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
+P TY + + K+ +A E + L+A
Sbjct: 357 IPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 387
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 157/338 (46%), Gaps = 3/338 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVF 255
+ T +T++ L R +A++ F M + + + LM+ L + G VE +
Sbjct: 149 VVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLD 208
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG-FSPDVVSYTCFIEHYCRE 314
+D + + + ++ G CK A +++M + P+VV Y+ I+ C++
Sbjct: 209 RMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKD 268
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ EMQEKG P + TY ++ + + ++A ++ ++M PD Y
Sbjct: 269 GRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTY 328
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI K G+ +A E++++M +G++PN +TYN+MI C + + A + M
Sbjct: 329 NALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMAT 388
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C PD T+ L+ C KR+ LL M + + + TY +L+ G G L
Sbjct: 389 KGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNA 448
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
A ++MIS G+ P T L + L + +L +A E
Sbjct: 449 ALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 486
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS------LATMSTIMRRLVR 209
G + YNT++ FCL+ +L +D L+ +S + T +T++ L
Sbjct: 425 GLVANTVTYNTLI------HGFCLVGDLNAALD-LSQQMISSGVCPDIVTCNTLLDGLCD 477
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF 269
G+ DA+E F+ M+K ++ D H + + + +
Sbjct: 478 NGKLKDALEMFKAMQKSKMDLDA----------------SHPF-------NGVEPDVLTY 514
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
NILI G K +A++ +EM +G PD ++Y+ I+ C++ + M
Sbjct: 515 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 574
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
K P+V+T+ +++ KA ++++ L+++ +M + D Y +LI+ K G +
Sbjct: 575 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 634
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
A +IF++M GV P+ +T M++ ++ E E A+ +L+ ++
Sbjct: 635 ALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 103/221 (46%), Gaps = 5/221 (2%)
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHA-LGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
R + DTL + + C+ ++ + + + K + +A+ ++ M LP +
Sbjct: 25 RSIRDTLAKASGESCEAGFGGESLKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCK 84
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ ++ + R +++ M+++ + ++ ++N +I C+ S+ AL K+ +
Sbjct: 85 LMGVVVRMERPDLVISLYQKMERKQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLG 144
Query: 437 CKPDCETYAPLLKMCCRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
PD T+ LL C + R+ + L+F MF+ + T+ +L+ GL G++ A
Sbjct: 145 LHPDVVTFTTLLHGLCVEDRVSEALDF-FHQMFETTCRPNVVTFTTLMNGLCREGRIVEA 203
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
+ + M+ G+ P TY + + + KK G+ +N L
Sbjct: 204 VALLDRMMEDGLQPTQITYGTIVDGMCKK--GDTVSALNLL 242
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 162/332 (48%), Gaps = 8/332 (2%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
++ + + Y + + M +G+ D L++++++ N V+ A V + +
Sbjct: 62 LLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKI---L 118
Query: 263 PLSSQ----IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
L Q F L+ G C K+ +A +M +GF P+VV+Y + C+++
Sbjct: 119 KLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLT 178
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + EM KG P + TY ++HAL + + +M +P+ + ++
Sbjct: 179 EALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVV 238
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L K G+V +A+++ + M + GV P+V+TY ++ C RSE + A+K+ M + C
Sbjct: 239 DALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCV 298
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
+ +Y L+ C+ +R+ +L M + ++ + TY++L+ GL G+L+ A +
Sbjct: 299 CNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIAL 358
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKK-RLGNA 529
F EM++ G +P TY +L + L K RL A
Sbjct: 359 FNEMVACGQIPNLVTYSILLDYLCKNHRLAEA 390
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 176/380 (46%), Gaps = 37/380 (9%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD-----------------TRALSVLMD 240
AT +T++R L G+ +A++ F M G + + T AL++ +
Sbjct: 127 ATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSE 186
Query: 241 TLVKG--------NSVEHAYKVFLEFKDCIPLSSQI-----------FNILIHGWCKTRK 281
+ KG NS+ HA E+K L +++ NI++ CK K
Sbjct: 187 MIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGK 246
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V +A + M Q G PDVV+Y ++ +C + + M GC +V++Y
Sbjct: 247 VTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNT 306
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ K ++I++A+ ++E+M + +P+T YS+LI L GR++DA +F +M G
Sbjct: 307 LINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACG 366
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+PN++TY+ ++ C A+ LL+ +E PD + Y + CR ++
Sbjct: 367 QIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAAR 426
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK- 520
L +++ + D T+ ++RGL + G L+ A F EM G + TY + +
Sbjct: 427 DLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGL 486
Query: 521 LEKKRLGNAKERINKLLAHA 540
L+ + A + + ++LA
Sbjct: 487 LQNNKTSRAIQLLEEMLARG 506
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 149/296 (50%), Gaps = 1/296 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ +++ ++ L + G+ +A + M + GVE D + LMD + ++ A KVF
Sbjct: 230 NVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVF 289
Query: 256 -LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ ++ + +N LI+G+CK +++D A +EM +Q P+ ++Y+ I C
Sbjct: 290 DMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHV 349
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ EM G P+++TY+I++ L K ++ EA+ + + ++ + PD Y
Sbjct: 350 GRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVY 409
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ I + +AG ++ A ++F ++ +G+ P+V T+N MI C R + A KL ++M+E
Sbjct: 410 NIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDE 469
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
+ C + TY + + + + LL M S D T A LV+ L + G
Sbjct: 470 NGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDG 525
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 171/380 (45%), Gaps = 4/380 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYD 214
G+ Y T+++ L K ++ L EM + G + T ++++ L +
Sbjct: 156 GFQPNVVTYGTLMNGLCKDRQLTEALNLFSEM--IAKGISPDIFTYNSLIHALCNLCEWK 213
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILI 273
M K + + +L++++D L K V A+ V + + + + L+
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALM 273
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G C ++D+A K M + G +VVSY I YC+ + K +EM +
Sbjct: 274 DGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELI 333
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ +TY+ ++H L ++ +A+ ++ +M + +P+ YS L+ L K R+ +A +
Sbjct: 334 PNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMAL 393
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+ ++ + P+V YN I C + E A L + +PD T+ +++ C+
Sbjct: 394 LKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCK 453
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+ + + L M +N + TY ++ +GL+++ K A EEM+++G ST
Sbjct: 454 RGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVST 513
Query: 514 YKMLEEKLEKKRLGNAKERI 533
+L + L L + ++I
Sbjct: 514 TALLVKMLSDDGLDQSVKQI 533
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 108/236 (45%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DDA + M P + + + + K + V K+M G P V T TI
Sbjct: 37 LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+++ +++ AL V K+ PDT+ +++L+ L G++ +A ++F+ M +G
Sbjct: 97 VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PNV+TY T+++ C + AL L +M PD TY L+ C K +
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M K+ + + + +V L + GK+ A + MI G+ P TY L
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAAL 272
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 124/285 (43%), Gaps = 36/285 (12%)
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
K+M G PDV + T I +C L ++ + G +P T+T ++ L
Sbjct: 80 KKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVV 139
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+I EAL V++KM + P+ Y +L+ L K ++ +A +F +M +G+ P++ TY
Sbjct: 140 GKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTY 199
Query: 410 NTMISSACARSEEENALKLLQKM---------------EEDLCK---------------- 438
N++I + C E ++ LL +M + LCK
Sbjct: 200 NSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQ 259
Query: 439 ----PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD TYA L+ C + M + M +N + +Y +L+ G + +++
Sbjct: 260 GGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDK 319
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLA 538
A FEEM + ++P TY L L RL +A N+++A
Sbjct: 320 AMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVA 364
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 57/139 (41%)
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ DA F M P + + +++S L L +KM+ PD T
Sbjct: 37 LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTI 96
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++ C R+ +L + K D T+ +LVRGL GK+ A F++M+ +G
Sbjct: 97 VINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156
Query: 507 IVPYHSTYKMLEEKLEKKR 525
P TY L L K R
Sbjct: 157 FQPNVVTYGTLMNGLCKDR 175
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 170/333 (51%), Gaps = 3/333 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T ++ L + G D A+ M+ +E D + ++D+L K V+ A +F
Sbjct: 224 NLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 283
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+E K P + ++ LI C + DA + + +M ++ +P++V++ I+ + +
Sbjct: 284 KEMETKGIRP-NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 342
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E F + + +M ++ P + TY +++ ++++A +++E M S DC PD
Sbjct: 343 EGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVT 402
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI K+ RV+D E+F +M +G+V + +TY T+I + +NA K+ ++M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
D PD TY+ LL C +++ + +M K+++ +D Y +++ G+ ++GK++
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 522
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
F + KG+ P TY + L KRL
Sbjct: 523 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 555
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 164/312 (52%), Gaps = 9/312 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T + ++ V+ G++ +A + + M K ++ D + L++ + ++ A ++F
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388
Query: 256 LEF---KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
EF KDC P +N LI G+CK+++V+D + +EM +G D V+YT I+
Sbjct: 389 -EFMVSKDCFP-DVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 446
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ D K+M G P ++TY+I++ L ++ +AL+V++ M+ + D
Sbjct: 447 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 506
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+++I + KAG+V D ++F + +GV PNV+TYNTMIS C++ + A LL+KM
Sbjct: 507 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 566
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ED P+ TY L++ R L+ M DA T LV ++ G+L
Sbjct: 567 KEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRL 625
Query: 493 ELACSFFEEMIS 504
+ + F +M+S
Sbjct: 626 DKS---FLDMLS 634
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 170/365 (46%), Gaps = 2/365 (0%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++NT++D L K + L KEM E ++ T S+++ L GR+ DA +
Sbjct: 262 IFNTIIDSLCKYRHVDDALNLFKEM-ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M + + + + L+D VK A K++ + K I +N L++G+C +
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDR 380
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A++ + M + PDVV+Y I+ +C+ K + +EM +G +TYT
Sbjct: 381 LDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTT 440
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L + A KV+++M SD PD YS L+ L G+++ A E+F+ M+K
Sbjct: 441 LIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 500
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ ++ Y TMI C + ++ L + KP+ TY ++ C K+ ++
Sbjct: 501 IKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAY 560
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
LL M ++ ++GTY +L+R + G + EM S V ST ++ L
Sbjct: 561 ALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVANML 620
Query: 522 EKKRL 526
RL
Sbjct: 621 HDGRL 625
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 165/359 (45%), Gaps = 2/359 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ + K KKF ++ L ++M L + L T + ++ R + A+ M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVH-GLYTYNILINCFCRRSQISLALALLGKM 146
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
K G E LS L++ G + A + + + I F LIHG K
Sbjct: 147 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 206
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A + M Q+G P++V+Y + C+ D + L +M+ + V+ + +
Sbjct: 207 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTI 266
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ +L K + +++AL ++++M++ P+ YSSLI L GR DA+++ DM ++ +
Sbjct: 267 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 326
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN++T+N +I + + A KL M + PD TY L+ C R+
Sbjct: 327 NPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQ 386
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ M D D TY +L++G +S ++E F EM +G+V TY L + L
Sbjct: 387 MFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 445
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 122/263 (46%), Gaps = 1/263 (0%)
Query: 263 PLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
PL S + FN L+ K +K D ++M + + +Y I +CR
Sbjct: 81 PLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLAL 140
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L +M + G +PS++T + +++ K+I++A+ + ++M PDT +++LI L
Sbjct: 141 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 200
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+ +A + + M ++G PN++TY +++ C R + + AL LL KME + D
Sbjct: 201 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADV 260
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
+ ++ C+ + + L M + + TY+SL+ L G+ A +
Sbjct: 261 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 320
Query: 502 MISKGIVPYHSTYKMLEEKLEKK 524
MI K I P T+ L + K+
Sbjct: 321 MIEKKINPNLVTFNALIDAFVKE 343
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 106/237 (44%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+DDA M + P +V + + + K F V ++MQ + TY
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + QI+ AL + KM P SSL+ R+ DA + + M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+ +T+ T+I ++ A+ L+ +M + C+P+ TY ++ C++ +
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + D + +++ L + ++ A + F+EM +KGI P TY L
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 82/174 (47%)
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++++A+ ++ M LP ++ L+ ++K + + E M++ +V + TYN
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I+ C RS+ AL LL KM + +P T + LL C KR+ L+ M +
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
D T+ +L+ GL K A + + M+ +G P TY ++ L K+
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 238
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 159/331 (48%), Gaps = 2/331 (0%)
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
+ R + +YD+++ + M G + D + L+ +E A +V +
Sbjct: 84 LNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHGK 143
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+N +I G+CK +VD A K + M ++GF PDVV+Y I ++C
Sbjct: 144 PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRV 203
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+ ++ + CKP+VITYTI++ A I+EA+K+ ++M S PD Y+ ++ + K
Sbjct: 204 MDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCK 263
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
G + A E + K G V V TYN ++ + E KL+ M C+P+ T
Sbjct: 264 EGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPIT 323
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y+ L+ CR ++ +L M + ++ D +Y L+ L GK++LA F ++MI
Sbjct: 324 YSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMI 383
Query: 504 SKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
S G +P +Y + L K GNA E +N
Sbjct: 384 SGGHLPDILSYNSILASLCKN--GNADEALN 412
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/339 (24%), Positives = 166/339 (48%), Gaps = 6/339 (1%)
Query: 184 VKEMDEL--NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
++ MD+L +N ++ T + ++ + G D+A++ M G+ D +V+++
Sbjct: 201 LRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNG 260
Query: 242 LVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
+ K ++ A++ + C+ S +NIL+ K + +K M +M +G P
Sbjct: 261 MCKEGMLDRAFEFLSRISKNGCVAGVST-YNILLRDLLNEGKWEYGEKLMSDMLVKGCEP 319
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+ ++Y+ I CR+ + + LK M+EK P +Y ++ AL + +++ A++
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFL 379
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+ M S LPD Y+S++ L K G +A IFE + + G PN +YNT+ + +
Sbjct: 380 DDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSS 439
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND-VSMDAGT 478
++ AL ++ +M + PD TY L+ CR + LL MF+++ +
Sbjct: 440 GDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVIS 499
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
Y +++ GL + ++ A M+++G +P +TY +L
Sbjct: 500 YNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLL 538
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 152/328 (46%), Gaps = 17/328 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRG 222
YN +V+ + K +E + + + NG V+ ++T + ++R L+ G+++ +
Sbjct: 254 YNVVVNGMCKEGMLDRAFEFLSRISK--NGCVAGVSTYNILLRDLLNEGKWEYGEKLMSD 311
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
M G E + S L+ L + ++ A V K+ + ++ LI C+ K
Sbjct: 312 MLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGK 371
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD A + + +M G PD++SY + C+ + + + +++ E GC P+ +Y
Sbjct: 372 VDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNT 431
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM-KKQ 400
+ AL + AL + +M S+ PD Y+SLI L + G V A E+ DM + +
Sbjct: 432 LFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESE 491
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC----RKKR 456
P V++YNT++ C +A+++L M + C P+ TY L++ R
Sbjct: 492 KCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDA 551
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVR 484
M++ N L V+MDA + S R
Sbjct: 552 MELANLL--------VNMDAISEDSFKR 571
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 114/240 (47%), Gaps = 11/240 (4%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDE---LNNGYVSLATMSTIMRRLVRGGRYDDA 216
P Y+T++ L + K ++K M E +GY + ++ L R G+ D A
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGY----SYDPLISALCREGKVDLA 375
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHG 275
+E M G D + + ++ +L K + + A +F + + P ++ +N L
Sbjct: 376 IEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGA 435
Query: 276 -WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE-KGCK 333
W K+ A + EM G PD ++Y I CR+ + + L +M E + C+
Sbjct: 436 LWSSGDKIR-ALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQ 494
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+VI+Y V+ L K ++I +A++V M ++ CLP+ + Y+ LI + AG DA E+
Sbjct: 495 PTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMEL 554
>gi|255579214|ref|XP_002530453.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529998|gb|EEF31923.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 391
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/378 (26%), Positives = 182/378 (48%), Gaps = 58/378 (15%)
Query: 132 QTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN 191
+TL +SND A FF W + + + HT + +N M+D+L +KF L
Sbjct: 54 ETLSCYSNDWKSALDFFNWVEKECNFNHTTDTFNRMIDIL---EKFNL------------ 98
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
KD + L+D L + V +
Sbjct: 99 --------------------------------------KDETSFCNLIDALCEHKHVIES 120
Query: 252 YKVFLEFKDCIPL--SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
++ + I + ++I+N+++ GW K ++ +EM Q+G D+ SY+ +++
Sbjct: 121 QELCFGNNNGIDIVNKTKIYNMILRGWFKMGWWSKCREFWEEMDQKGVHKDLHSYSIYMD 180
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
C+ K KEM+ KG K V++Y IV+ A+G ++ ++ A++VY +MK C+P
Sbjct: 181 IVCKGGKPWKAVKLYKEMKRKGMKLDVVSYNIVVRAVGLSEGVDFAMRVYREMKELGCMP 240
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ Y+++I +L + GRVK+A ++ +DM+K+G+V +V+TY+ C +E L L
Sbjct: 241 NVVTYNTIIKLLCETGRVKEAYKMLDDMRKKGIVADVITYHCFFR--CLEKPKE-ILWLF 297
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+M E +P +TY L++ R ++ + + M + S D Y +L+ L++
Sbjct: 298 DRMIESGVQPRMDTYVMLMRKFGRWGFLRPVLLVWKKMEEQGCSPDEFAYNALIDALVQK 357
Query: 490 GKLELACSFFEEMISKGI 507
G L +A + EEM++KG+
Sbjct: 358 GMLHMARRYEEEMLAKGL 375
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 84/188 (44%), Gaps = 39/188 (20%)
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y +++ K ++ + +E+M D YS + I+ K G+ A +++++MK
Sbjct: 140 YNMILRGWFKMGWWSKCREFWEEMDQKGVHKDLHSYSIYMDIVCKGGKPWKAVKLYKEMK 199
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++G+ +V++YN ++ + + A+++ ++M+E C P+ TY ++K+ C
Sbjct: 200 RKGMKLDVVSYNIVVRAVGLSEGVDFAMRVYREMKELGCMPNVVTYNTIIKLLC------ 253
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP----YHSTY 514
E+G+++ A ++M KGIV YH +
Sbjct: 254 -----------------------------ETGRVKEAYKMLDDMRKKGIVADVITYHCFF 284
Query: 515 KMLEEKLE 522
+ LE+ E
Sbjct: 285 RCLEKPKE 292
>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
Length = 691
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 169/362 (46%), Gaps = 4/362 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ + D L ++ M L + L NG + T S ++ L + G+ A E +
Sbjct: 308 YSILFDGLSRNGDSKAMLSLFGKY--LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 365
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
+ G+ + L++ + +E A+ F + K I +N LI+G CK +
Sbjct: 366 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 425
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +AQ + EM G +P V ++ I+ Y R K L EMQE G KP+V++Y
Sbjct: 426 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 485
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++A K +I EA+ + + M D LP+ Y+++I + G A + E MK G
Sbjct: 486 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 545
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+++TYN +I C +S+ A +++ + PD +Y L+ CC + +
Sbjct: 546 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 605
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M K + TY L+ GL +G+L +++M+ +VP ++ + ++ E
Sbjct: 606 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 665
Query: 522 EK 523
K
Sbjct: 666 SK 667
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 153/319 (47%), Gaps = 3/319 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ + R GR DAVE F M + V + + ++D +KG +E +++ +
Sbjct: 204 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV- 262
Query: 261 CIPL--SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
C L ++ +N+L+ G C+ ++ + + EM Q PD +Y+ + R D +
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 322
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + + G T +I+++ L K +++ A +V + + + +P Y++LI
Sbjct: 323 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 382
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ G ++ A F MK + + P+ +TYN +I+ C NA LL +M+++
Sbjct: 383 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 442
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P ET+ L+ R +++ +L+ M +N + + +Y S+V ++GK+ A +
Sbjct: 443 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 502
Query: 499 FEEMISKGIVPYHSTYKML 517
++M K ++P Y +
Sbjct: 503 LDDMFHKDVLPNAQVYNAI 521
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 106/472 (22%), Positives = 190/472 (40%), Gaps = 63/472 (13%)
Query: 94 ETDVDKISKILSKQYQSPDKVV--EALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWA 151
DV + IL+ PD +A++ C + LRR D P F++
Sbjct: 145 HADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYN 204
Query: 152 KTQTGYMHTP----------EM-----------YNTMVDVLGKSKKFCLMWELVKEMDEL 190
G EM YNTM+D K + L +M +
Sbjct: 205 VVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQM--V 262
Query: 191 NNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE 249
+G A T + ++ L R GR + M + D S+L D L + +
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 322
Query: 250 HAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
+F ++ K+ + + +IL++G CK KV A++ ++ + G P V Y I
Sbjct: 323 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 382
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
YC+ + T +M+ + KP ITY +++ L KA++I A + +M+ +
Sbjct: 383 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 442
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P +++LI + G+++ + +M++ G+ PNV++Y +++++ C + A+ +
Sbjct: 443 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 502
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
L MF DV +A Y +++ +E
Sbjct: 503 LDD-----------------------------------MFHKDVLPNAQVYNAIIDAYVE 527
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAH 539
G + A E+M S GI P TY +L + L + ++ A+E IN L H
Sbjct: 528 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNH 579
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 4/196 (2%)
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
R D R+ L G +P + + A A + EA+ + +M D P +
Sbjct: 144 RHADVRRAFGILAS---AGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNA 200
Query: 373 F-YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
F Y+ +I + +AGR DA E+F++M ++ V+PN +TYNTMI + E +L +
Sbjct: 201 FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQ 260
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M KP+ TY LL CR RM + LL M + D TY+ L GL +G
Sbjct: 261 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 320
Query: 492 LELACSFFEEMISKGI 507
+ S F + + G+
Sbjct: 321 SKAMLSLFGKYLKNGV 336
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 161/333 (48%), Gaps = 6/333 (1%)
Query: 190 LNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
L G+ V++ M+ +++ L R G +A+ R M + V D + + L++ L K +
Sbjct: 136 LKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKL 195
Query: 249 EHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
+ A + LE + C P +S L+ G CK ++D+A + ++ M ++GF DVV Y
Sbjct: 196 KEAVGLLLEMEAAGCFP-NSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGT 254
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I +C + + + EM KG +V+TY+ ++H L + Q EA V M
Sbjct: 255 LISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHG 314
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
PD Y+ LI L K GR A ++ M ++G P+ +TYN ++S C +A
Sbjct: 315 IHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAF 374
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG--TYASLVR 484
K+L+ M E K D TY L+K C K ++ L MF N+ ++ T+ L+
Sbjct: 375 KILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIG 434
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
GL + G+L A +M+ KG TY ML
Sbjct: 435 GLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNML 467
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 176/386 (45%), Gaps = 38/386 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ L K+KK L+ EM E + + T +T+M L + GR D+A+E M
Sbjct: 182 YNTLINGLCKAKKLKEAVGLLLEM-EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAM 240
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
KK G + D ++ LI G+C +D
Sbjct: 241 KKKGFDADV----------------------------------VLYGTLISGFCNNGNLD 266
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
++ EM +G S +VV+Y+C + CR +++ + L M E G P V+TYT ++
Sbjct: 267 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 326
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
L K + A+ + M P Y+ L+ L K G V DA +I M ++G
Sbjct: 327 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 386
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKM--EEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+V+TYNT++ C + + + ALKL M E+ +P+ T+ L+ C++ R+
Sbjct: 387 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 446
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ M K + TY L+ G +++GK++ A +++++ G VP TY +L +
Sbjct: 447 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506
Query: 522 EKKRLGN-AKERINKLLAHAKEQKTF 546
K R+ N AK ++ H F
Sbjct: 507 CKMRMLNIAKGLFCEMRTHGLNPALF 532
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 94/330 (28%), Positives = 151/330 (45%), Gaps = 5/330 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S AT + ++ L R Y A +R M V +LS L++ + + V
Sbjct: 73 SWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVV 132
Query: 256 -LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
L K ++ I NI++ G C+ V +A ++EM ++ SPD+VSY I C+
Sbjct: 133 GLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKA 192
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
K ++ L EM+ GC P+ +T T +M L K +++EA+++ E MK D Y
Sbjct: 193 KKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLY 252
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+LI G + E+F++M +G+ NV+TY+ ++ C + + A +L M E
Sbjct: 253 GTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAE 312
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD TY L+ C+ R LL M + TY L+ GL + G +
Sbjct: 313 HGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVID 372
Query: 495 ACSFFEEMISKG----IVPYHSTYKMLEEK 520
A MI KG +V Y++ K L +K
Sbjct: 373 AFKILRMMIEKGKKADVVTYNTLMKGLCDK 402
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 188/428 (43%), Gaps = 49/428 (11%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVR 209
A + G+ +Y T++ + EL EM L G ++ T S ++ L R
Sbjct: 239 AMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM--LGKGISANVVTYSCLVHGLCR 296
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQI 268
G++ +A M ++G+ D + L+D L K HA + L + S+
Sbjct: 297 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 356
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N+L+ G CK V DA K ++ M ++G DVV+Y ++ C D KVD+ LK
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLC---DKGKVDEALKLFN 413
Query: 329 -----EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
E +P+V T+ +++ L K ++ +A+K++ KM + Y+ L+ K
Sbjct: 414 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 473
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTY---------------------------------- 409
AG++K+A E+++ + G VPN TY
Sbjct: 474 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD 533
Query: 410 -NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
NT+++S C E A L Q+M C+PD ++ ++ + + + L M
Sbjct: 534 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 593
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGN 528
+ + DA T+++L+ L + G+L+ A S E M++ G P Y L + L K G+
Sbjct: 594 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSK--GD 651
Query: 529 AKERINKL 536
E IN L
Sbjct: 652 TTEIINLL 659
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 150/317 (47%), Gaps = 3/317 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIF 269
++ +AV F + + + L+D L + + A+ V+ + D +P S
Sbjct: 54 QFTEAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLP-SFGSL 112
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+ LI + +K + + ++GF+ +V ++ CR + ++EM
Sbjct: 113 SALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGR 172
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
K P +++Y +++ L KAK++ EA+ + +M++ C P++ ++L+ L K GR+ +
Sbjct: 173 KSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDE 232
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A E+ E MKK+G +V+ Y T+IS C + +L +M + TY+ L+
Sbjct: 233 AMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVH 292
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
CR + K N +L M ++ + D TY L+ GL + G+ A M+ KG P
Sbjct: 293 GLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEP 352
Query: 510 YHSTYKMLEEKLEKKRL 526
+ TY +L L K+ L
Sbjct: 353 SNVTYNVLLSGLCKEGL 369
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 162/348 (46%), Gaps = 4/348 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y ++D L K + +L+ M E S T + ++ L + G DA + R M
Sbjct: 322 YTGLIDGLCKDGRATHAMDLLNLMVE-KGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM 380
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKTR 280
+ G + D + LM L V+ A K+F + ++C+ + FN+LI G CK
Sbjct: 381 IEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 440
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ A K ++M ++G ++V+Y + + ++ + K++ + G P+ TY+
Sbjct: 441 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 500
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I++ K + +N A ++ +M++ P Y++L+ L K G ++ A +F++M
Sbjct: 501 ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 560
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
P+++++NTMI + + +L KM E +PD T++ L+ + +
Sbjct: 561 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 620
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
L M + + DA Y SL++GL G + +M +KG V
Sbjct: 621 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 668
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 162/346 (46%), Gaps = 12/346 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++ L K +++++ M E + T +T+M+ L G+ D+A++ F M
Sbjct: 357 YNVLLSGLCKEGLVIDAFKILRMMIE-KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 415
Query: 224 --KKYGVEKDTRALSVLMDTLVKGNSVEHAYKV---FLEFKDCIPLSSQIFNILIHGWCK 278
+ +E + ++L+ L K + A K+ ++ C L + +N+L+ G K
Sbjct: 416 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVT--YNMLLGGCLK 473
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
K+ +A + K++ GF P+ +Y+ I+ +C+ + EM+ G P++
Sbjct: 474 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD 533
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y +M +L K + +A ++++M + +C PD ++++I KAG + E+ M
Sbjct: 534 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 593
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ G+ P+ LT++T+I+ E + A L++M PD Y LLK K
Sbjct: 594 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 653
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK----LELACSFFE 500
+ LL M +D ++++ L S + +EL +FF+
Sbjct: 654 EIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQ 699
>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Brachypodium distachyon]
Length = 968
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/311 (30%), Positives = 148/311 (47%), Gaps = 6/311 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T +TI+ V+ GR+ A+ M+K GVE D ++++D L K HAY +
Sbjct: 258 NVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLL 317
Query: 256 LEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ D + +N LI G+ K+ A EM +QG P + +YT I+ YCR
Sbjct: 318 KRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRN 377
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ L EMQ G KPS +TY+ +++ ++EA VY+ M+ C PD Y
Sbjct: 378 GTIDEALRVLYEMQVAGVKPSEVTYSAMLNG-----SVHEAFSVYDNMEKYGCSPDVYTY 432
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+L+ L K G + A E + + T N ++ C + AL L +KM
Sbjct: 433 RNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVT 492
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD TY LL CRK ++ LL M + + D TY L++GLI+ G+++
Sbjct: 493 INFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKA 552
Query: 495 ACSFFEEMISK 505
A F+E+I K
Sbjct: 553 ASYLFQEIICK 563
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 168/426 (39%), Gaps = 78/426 (18%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAV----- 217
YNT++ K L + EM L G SLAT +T++ R G D+A+
Sbjct: 332 YNTLIKGFFDESKMMLAIHIFNEM--LRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYE 389
Query: 218 ----------------------EAFR---GMKKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
EAF M+KYG D L+ L KG + A
Sbjct: 390 MQVAGVKPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAK 449
Query: 253 KVFLEFKDCI-----PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
EF CI + + N L+ G C +D+A ++M F PD+ +YT
Sbjct: 450 ----EFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTIL 505
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK------ 361
+ +CR+ L+ M EKG P ++TYT ++ L K Q+ A ++++
Sbjct: 506 LSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEG 565
Query: 362 ------------------------------MKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
M + P+ + Y+ L+ K G + +
Sbjct: 566 MYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSI 625
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+++DM ++G+ P +TY +I E A+K L KM + PD ++ L+
Sbjct: 626 YLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAF 685
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
K RM L M +S + TY++++ GLI L+ +C +M+ G+ P H
Sbjct: 686 SEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKH 745
Query: 512 STYKML 517
+ Y L
Sbjct: 746 THYIAL 751
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 147/341 (43%), Gaps = 32/341 (9%)
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSS 266
V+ R DA A M G + A + +++ LV+ +H + E PL
Sbjct: 166 VKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEGLVRKFPLDV 225
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
NI+++ C + A+ + +M P+V++Y + Y ++ F+ L++
Sbjct: 226 TTCNIVLNSMCIEGNLKGAKHMIHKMKSCSL-PNVITYNTILHWYVKKGRFKAAMCVLED 284
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M++ G + V TY I++ L K K+ A + ++M+ D+ PD Y++LI +
Sbjct: 285 MEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESK 344
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL----------------- 429
+ A IF +M +QG+ P++ TY T+I C + AL++L
Sbjct: 345 MMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSA 404
Query: 430 -------------QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
ME+ C PD TY LL+ C+ + ++ + ++D
Sbjct: 405 MLNGSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQ 464
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
T +L+ G+ G L+ A E+M++ +P TY +L
Sbjct: 465 KTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTIL 505
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 176/375 (46%), Gaps = 10/375 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+M++ K+ K + + +M++ N Y + A+ + +M ++ G ++ ++ M
Sbjct: 573 YNSMMNGYLKAGKLHKVEMTIYDMNQ-NKVYPNPASYNILMHGHIKKGHLSRSIYLYKDM 631
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILIHGWCKTRK 281
+ G++ +L+ L K +E A K FL+ + I F++LI+ + + +
Sbjct: 632 VRKGIKPTNVTYRLLILGLSKHGMIEIAVK-FLDKMVLEGIYPDRLSFDVLINAFSEKSR 690
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ DA + M SP +Y+ I R+ + D L++M E G +P Y
Sbjct: 691 MSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIA 750
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++A + IN A ++ E+M + +P SS++ LSK G+V++ +F + + G
Sbjct: 751 LINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAG 810
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+VP + T+ T++ C ++ +AL L ME K D TY L+ C+ + +
Sbjct: 811 MVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDAL 870
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M + + TY +L + +G+ ++ +G+VP ++ ++
Sbjct: 871 ELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPSYT------DQC 924
Query: 522 EKKRLGNAKERINKL 536
+ R+ NA +R+N +
Sbjct: 925 PEWRMENAMDRLNMI 939
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 151/352 (42%), Gaps = 45/352 (12%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK----- 253
T ++R L +GG A E + D + L+ L+ + S++ A
Sbjct: 431 TYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKM 490
Query: 254 VFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC------- 306
V + F IP + IL+ G+C+ K+ A ++ M ++G PD+V+YTC
Sbjct: 491 VTINF---IP-DIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLLKGLIK 546
Query: 307 ----------FIEHYCREKDF-------------------RKVDDTLKEMQEKGCKPSVI 337
F E C+E + KV+ T+ +M + P+
Sbjct: 547 EGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPA 606
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
+Y I+MH K ++ ++ +Y+ M P Y LI LSK G ++ A + + M
Sbjct: 607 SYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKM 666
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+G+ P+ L+++ +I++ +S +AL+L M+ P +TY+ ++ RK +
Sbjct: 667 VLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWL 726
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ +L M ++ + Y +L+ G + A EEM + GIVP
Sbjct: 727 QHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVP 778
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 113/247 (45%), Gaps = 1/247 (0%)
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+F++L++ + K ++V DA A+ M GF + + + + V LKE
Sbjct: 157 VFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHACNAVLNALVEIGESKHVWFFLKEG 216
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+ V T IV++++ + A + KMKS LP+ Y++++ K GR
Sbjct: 217 LVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIHKMKSCS-LPNVITYNTILHWYVKKGRF 275
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
K A + EDM+K GV +V TYN MI C +A LL++M D PD TY L
Sbjct: 276 KAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTL 335
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+K + +M + + M + + TY +L+ G +G ++ A EM G+
Sbjct: 336 IKGFFDESKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGV 395
Query: 508 VPYHSTY 514
P TY
Sbjct: 396 KPSEVTY 402
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 153/307 (49%), Gaps = 26/307 (8%)
Query: 212 RYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
R D AV F + + + V +D + L+D L K A + + P +N
Sbjct: 142 RPDIAVRLFLSLHRSHRVVQDLPLFNSLLDALGKSRHASKAASLVRALERRFPPDVVTYN 201
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
L GWC+ + A +++M + G +P +Y ++ + R + + +M+++
Sbjct: 202 TLADGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKR 261
Query: 331 G-----CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
G CKP +++YT ++H LG A Q+++A K++++M + C P + Y++LI ++ K G
Sbjct: 262 GAKDESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKG 321
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
V+DA +F+DM ++ +PNV+TY +I C + + A+KL+++M+ + C+P +TY
Sbjct: 322 NVEDAVTVFDDMVRKDYMPNVVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYN 381
Query: 446 PLL----------KMCCRKKRMK----------VLNFLLTHMFKNDVSMDAGTYASLVRG 485
L+ K C +RM N +++ MF + D T A +V
Sbjct: 382 VLIRYSFEEGEIEKALCLFERMSKGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVME 441
Query: 486 LIESGKL 492
++E G L
Sbjct: 442 MVERGYL 448
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 127/257 (49%), Gaps = 9/257 (3%)
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+FN L+ K+R A ++ + ++ F PDVV+Y + +CR KD + D L++M
Sbjct: 165 LFNSLLDALGKSRHASKAASLVRAL-ERRFPPDVVTYNTLADGWCRAKDTSRALDLLRQM 223
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK-----SDDCLPDTSFYSSLIFILS 382
E G P+ TY I++ +A QI A + +MK + C PD Y+++I L
Sbjct: 224 AESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLG 283
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
AG++ A ++F++M K+G P+V TYN +I C + E+A+ + M P+
Sbjct: 284 VAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVV 343
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L++ C ++ L+ M TY L+R E G++E A FE M
Sbjct: 344 TYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERM 403
Query: 503 ISKG--IVPYHSTYKML 517
SKG +P TY ++
Sbjct: 404 -SKGEDCLPNQDTYNII 419
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 137/283 (48%), Gaps = 14/283 (4%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N+++D LGKS+ LV+ ++ + T +T+ R A++ R
Sbjct: 165 LFNSLLDALGKSRHASKAASLVRALER--RFPPDVVTYNTLADGWCRAKDTSRALDLLRQ 222
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-------DCIPLSSQIFNILIHG 275
M + GV ++++ + ++HA+ FL+ K C P + +IHG
Sbjct: 223 MAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKP-DIVSYTTIIHG 281
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
++D A+K EM ++G +P V +Y I+ C++ + +M K P+
Sbjct: 282 LGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPN 341
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+TYT+++ L +I+ A+K+ E+MK + C P Y+ LI + G ++ A +FE
Sbjct: 342 VVTYTVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFE 401
Query: 396 DMKK-QGVVPNVLTYNTMISSACARSEEEN---ALKLLQKMEE 434
M K + +PN TYN +IS+ R E+ A +++ +M E
Sbjct: 402 RMSKGEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVMEMVE 444
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 86/178 (48%), Gaps = 10/178 (5%)
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+S + D ++SL+ L K+ A + ++++ P+V+TYNT+ C +
Sbjct: 155 RSHRVVQDLPLFNSLLDALGKSRHASKAASLVRALERR-FPPDVVTYNTLADGWCRAKDT 213
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK-VLNFLLTHMFKNDVS-----MDA 476
AL LL++M E P TY +LK R +++ NF L M K D
Sbjct: 214 SRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFL-QMKKRGAKDESCKPDI 272
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
+Y +++ GL +G+L+ A F+EM +G P +TY L + + KK GN ++ +
Sbjct: 273 VSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKK--GNVEDAVT 328
>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 600
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 171/341 (50%), Gaps = 6/341 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-K 259
+T+MR L R AV R M+ GV D L+ L V+ A ++ E +
Sbjct: 98 TTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCE 157
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
I + +++ L+HG+CKT + + K +EM +G PDVV YT I+ CR +K
Sbjct: 158 SGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKK 217
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ M E+G +P+V+TY ++++++ K + EAL + + M PD Y++LI
Sbjct: 218 AARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLIT 277
Query: 380 ILSKAGRVKDANEIFEDMKKQG---VVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LS + +A + E+M QG V P+++T+N++I C AL++ M E+
Sbjct: 278 GLSSVLEMDEAMALLEEM-MQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENG 336
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C+ + + L+ R ++K L+ M + + D+ TY+ L+ G + ++E A
Sbjct: 337 CRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAE 396
Query: 497 SFFEEMISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKL 536
S+ EM +G+ P Y +L+ ++ +G A++ N++
Sbjct: 397 SYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM 437
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 178/410 (43%), Gaps = 40/410 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ L ++ L++ M + + T T++R L D AVE M
Sbjct: 97 YTTLMRALCADRRAAQAVGLLRSMQDCGV-RPDVVTYGTLIRGLCDAADVDTAVELLNEM 155
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKV 282
+ G+E + S L+ K E KVF E I ++ LI C+ KV
Sbjct: 156 CESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKV 215
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A + M M ++G P+VV+Y I C+E R+ D K M EKG +P V+TY +
Sbjct: 216 KKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTL 275
Query: 343 MHALGKAKQINEALKVYEKMKSDD--CLPDTSFYSSLIFILSKAG--------------- 385
+ L +++EA+ + E+M + PD ++S+I L K G
Sbjct: 276 ITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAEN 335
Query: 386 --------------------RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
+VK A E+ ++M G+ P+ TY+ +I+ C + E A
Sbjct: 336 GCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERA 395
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L +M +P+ Y PLLK C + M L M +N +DA Y++++ G
Sbjct: 396 ESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDRN-CKLDAAAYSTMIHG 454
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
+SG+ ++A F ++MI +G++P TY + K A ER+ K
Sbjct: 455 AFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLK 504
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/402 (23%), Positives = 178/402 (44%), Gaps = 50/402 (12%)
Query: 163 MYNTMVDVL---GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
MY ++D L GK KK + +++ E N + T + ++ + + G +A++
Sbjct: 201 MYTALIDSLCRHGKVKKAARVMDMMTERGLEPN----VVTYNVLINSMCKEGSVREALDL 256
Query: 220 FRGMKKYGVEKDT-------RALS---------VLMDTLVKG-----------NSVEHAY 252
+ M + GV+ D LS L++ +++G NSV H
Sbjct: 257 RKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGL 316
Query: 253 KVFLEFKDCIPLSSQI-----------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
+ + + + + FN+LI G + KV A + M EM G PD
Sbjct: 317 CKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDS 376
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
+Y+ I +C+ + + + L EM+ +G +P + Y ++ A+ + +A ++ +
Sbjct: 377 FTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNE 436
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M + C D + YS++I K+G K A E +DM +G++P+ +TY+ I+ +
Sbjct: 437 MDRN-CKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGD 495
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
A ++L++M PD + L++ K + + L M DV++D ++
Sbjct: 496 LAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVALDPKIIST 555
Query: 482 LVRGL---IESGKLELACSFFEEMISKG-IVPYHSTYKMLEE 519
+V L IE KL + F+ ISKG ++ H ML++
Sbjct: 556 IVTSLGASIEGQKLLQSLPGFDTEISKGDVISPHDVMNMLQK 597
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 118/238 (49%), Gaps = 3/238 (1%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQ---GFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+N ++ C+ +D A ++ M + P+ +SYT + C ++ + L+
Sbjct: 59 YNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLR 118
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
MQ+ G +P V+TY ++ L A ++ A+++ +M P+ YS L+ K G
Sbjct: 119 SMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTG 178
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
R + ++FE+M +G+ P+V+ Y +I S C + + A +++ M E +P+ TY
Sbjct: 179 RWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYN 238
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
L+ C++ ++ L +M + V D TY +L+ GL +++ A + EEM+
Sbjct: 239 VLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMM 296
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 99/221 (44%), Gaps = 3/221 (1%)
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEK---GCKPSVITYTIVMHALGKAKQINEAL 356
D VSY + CR+ L+ M + +P+ I+YT +M AL ++ +A+
Sbjct: 55 DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ M+ PD Y +LI L A V A E+ +M + G+ PNV+ Y+ ++
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
C E+ K+ ++M +PD Y L+ CR ++K ++ M + + +
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
TY L+ + + G + A + M KG+ P TY L
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTL 275
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 8/207 (3%)
Query: 334 PSV---ITYTIVMHALGKAKQINEALKVYEKMKSDDCL---PDTSFYSSLIFILSKAGRV 387
PSV ++Y V+ AL + ++ AL + M + L P+ Y++L+ L R
Sbjct: 51 PSVRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRA 110
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A + M+ GV P+V+TY T+I C ++ + A++LL +M E +P+ Y+ L
Sbjct: 111 AQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCL 170
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
L C+ R + + + M + D Y +L+ L GK++ A + M +G+
Sbjct: 171 LHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGL 230
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKERIN 534
P TY +L + K+ G+ +E ++
Sbjct: 231 EPNVVTYNVLINSMCKE--GSVREALD 255
>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
Length = 347
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 169/315 (53%), Gaps = 5/315 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T + ++ + + GR DDA+E + YG E +T + ++++ L E A K+
Sbjct: 16 IITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWEDAEKLME 75
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E K C P + FN+LI C+ V+ A + ++++ + G +P+ +SY + +C++
Sbjct: 76 EMAHKGCPP-NVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQ 134
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
K K ++ M +GC P +++Y ++ AL + +++ A+ + ++K C P Y
Sbjct: 135 KKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISY 194
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+++I L+KAG+ K+A E+ ++M +G+ P+++TY T+ S C + E A++ K+++
Sbjct: 195 NTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQD 254
Query: 435 DLCKPDCETY-APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+P Y A LL +C R++ ++ L ++M N + TY LV GL G ++
Sbjct: 255 MGIRPTVVLYNAILLGLCKRRETHNAID-LFSYMISNGCMPNESTYTILVEGLAYEGLVK 313
Query: 494 LACSFFEEMISKGIV 508
A ++ S+G+V
Sbjct: 314 EARDLLGQLCSRGVV 328
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 120/235 (51%)
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
K + EM +G +PD+++Y + C+E + L+ + G +P+ ++Y IV+ L
Sbjct: 2 KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
A++ +A K+ E+M C P+ ++ LI L + G V+ A E+ E + K G PN
Sbjct: 62 FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
L+YN ++ + C + + + A+ ++ M C PD +Y LL CR + V LL
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ S +Y +++ GL ++GK + A +EMISKG+ P TY + L
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGL 236
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 132/267 (49%), Gaps = 1/267 (0%)
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K C P +N++++G C+ +VDDA + ++ + G P+ VSY ++ + +
Sbjct: 10 KGCAP-DIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGLFTAERWE 68
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ ++EM KGC P+V+T+ +++ L + + A++V E++ C P++ Y+ L+
Sbjct: 69 DAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNSLSYNPLL 128
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
K ++ A E M +G P++++YNT++++ C E + A+ LL +++ C
Sbjct: 129 HAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKGKGCS 188
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P +Y ++ + + K LL M + D TY ++ GL K+E A
Sbjct: 189 PVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEEAIRT 248
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKR 525
F ++ GI P Y + L K+R
Sbjct: 249 FCKVQDMGIRPTVVLYNAILLGLCKRR 275
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 83/162 (51%)
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+K+ ++M+ C PD Y+ ++ + + GRV DA E E++ G PN ++YN ++
Sbjct: 1 MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
E+A KL+++M C P+ T+ L+ CR+ ++ +L + K + +
Sbjct: 61 LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ +Y L+ + K++ A +F E M+S+G P +Y L
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTL 162
>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
Length = 820
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/327 (25%), Positives = 163/327 (49%), Gaps = 3/327 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++++ R + D A + F M G +D + + L++ + V+ A ++F E
Sbjct: 166 TFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFREL 225
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
+ L+ G C R+ ++ +++M + G+ P +Y ++ +CRE+
Sbjct: 226 EQP---DMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAE 282
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + L EM + G P +T T V++A + +++ A++V+E MK C P+ Y++++
Sbjct: 283 EAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMV 342
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
G+V A + + M++ GV P+V+TYN +I C E+A +LL+ ME +
Sbjct: 343 QGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLA 402
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
D TY L+ C+ ++ L + + ++ T+ +++ GL + GK ++AC+F
Sbjct: 403 ADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTF 462
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKR 525
E+M+S G P TY E L K +
Sbjct: 463 LEKMVSAGCAPDTYTYSPFIENLCKTK 489
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/363 (27%), Positives = 171/363 (47%), Gaps = 32/363 (8%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM---DELNNGYV--SLATMSTIMRRLVRGGRYDDAVE 218
YN MV + FC + ++ K M D++ V + T + ++R G + A
Sbjct: 338 YNAMV------QGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFR 391
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGW 276
R M+ G+ D +VL+D L K V+ A +F LE++ P +S FN +I+G
Sbjct: 392 LLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRP-NSVTFNTVINGL 450
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK K D A +++M G +PD +Y+ FIE+ C+ K R+ + EM +K KPS
Sbjct: 451 CKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPST 510
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+ YTIV+ L K + A +++ +M S C PD Y++ + GR+ +A + +
Sbjct: 511 VNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVME 570
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY------------ 444
MKK G++ + + YNT+I + + ++A+ +L+ M P+ T+
Sbjct: 571 MKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRL 630
Query: 445 ---APLLKMCCRKKRMKVLNF--LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
P LK K +++ + L M KN V A Y +++ G E +L+ S
Sbjct: 631 AEDVP-LKTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLV 689
Query: 500 EEM 502
M
Sbjct: 690 SHM 692
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/360 (23%), Positives = 168/360 (46%), Gaps = 6/360 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ Y +++ ++ + EL +E+++ + + T + +++ L R ++
Sbjct: 194 GFSQDAVSYAALIEGFCETGRVDEALELFRELEQPD-----MYTHAALVKGLCDARRGEE 248
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIH 274
+ + MK+ G TRA + L+D + E A K+ E F + + + +++
Sbjct: 249 GLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVN 308
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
+C+ ++ A + + M +G P+V +Y ++ +C K L +M+E G +P
Sbjct: 309 AYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEP 368
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
V+TY +++ I A ++ M+ + D Y+ LI L K G+V +A +F
Sbjct: 369 DVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLF 428
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ ++ +G+ PN +T+NT+I+ C + + A L+KM C PD TY+P ++ C+
Sbjct: 429 DGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKT 488
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
K + + M + DV Y ++ L + LA + +M+S G P TY
Sbjct: 489 KGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTY 548
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 85/363 (23%), Positives = 157/363 (43%), Gaps = 4/363 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGR 212
+ G+ Y +VD+ + +K +++ EM +NG V A T + ++ R GR
Sbjct: 258 ELGWRPATRAYAALVDLWCREQKAEEAEKMLNEM--FDNGLVPCAVTCTAVVNAYCREGR 315
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNI 271
AV F MK G E + + ++ V A + + ++C + +N+
Sbjct: 316 MSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNL 375
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G C ++ A + ++ M G + D +Y I+ C+ + ++ +G
Sbjct: 376 LIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRG 435
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+P+ +T+ V++ L K + + A EKM S C PDT YS I L K ++
Sbjct: 436 IRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGL 495
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++M ++ V P+ + Y +I A ++ +M C PD TY ++
Sbjct: 496 SFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAY 555
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C + R+ ++ M K + +DA Y +L+ G GK + A + + M +P H
Sbjct: 556 CNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNH 615
Query: 512 STY 514
T+
Sbjct: 616 FTF 618
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 132/325 (40%), Gaps = 66/325 (20%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ +N LI C+ + AQ+ + M + G+ PD ++ I YCR + D
Sbjct: 128 TGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLF 187
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY------------------------- 359
+M +G ++Y ++ + +++EAL+++
Sbjct: 188 DKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELEQPDMYTHAALVKGLCDARRGE 247
Query: 360 ------EKMKSDDCLPDTSFYSSLIFILSKAGRVKDA----NEI---------------- 393
+KMK P T Y++L+ + + + ++A NE+
Sbjct: 248 EGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVV 307
Query: 394 ---------------FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
FE MK +G PNV TYN M+ C + A+ LL +M E +
Sbjct: 308 NAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVE 367
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PD TY L++ C ++ LL M N ++ D TY L+ L ++GK++ ACS
Sbjct: 368 PDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSL 427
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEK 523
F+ + +GI P T+ + L K
Sbjct: 428 FDGLEYRGIRPNSVTFNTVINGLCK 452
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 114/256 (44%), Gaps = 5/256 (1%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF-SPDVVSYTCFIEHYCREKDFRKVD 321
PL + F L+ + + + M+ G +P +Y I CR D R
Sbjct: 90 PLFDRTFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQ 149
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L M G +P T+ ++ + +Q++ A +++KM D Y++LI
Sbjct: 150 RYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGF 209
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+ GRV +A E+F ++++ P++ T+ ++ C E L +LQKM+E +P
Sbjct: 210 CETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPAT 265
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
YA L+ + CR+++ + +L MF N + A T ++V G++ A FE
Sbjct: 266 RAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFES 325
Query: 502 MISKGIVPYHSTYKML 517
M KG P TY +
Sbjct: 326 MKLKGCEPNVWTYNAM 341
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/303 (19%), Positives = 113/303 (37%), Gaps = 22/303 (7%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y ++D L K + + L + +M L + T +T +R GR +A M
Sbjct: 513 YTIVIDRLFKERNYGLATRIWGQMVSLGCS-PDVVTYTTSVRAYCNEGRLHEAENVVMEM 571
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG-------- 275
KK G+ D A + L+D +HA + + + F I
Sbjct: 572 KKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNH-FTFFILLRHLLQRRL 630
Query: 276 -----------WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
W KT ++ D + + M + +Y +E + E+ +V +
Sbjct: 631 AEDVPLKTTSVW-KTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLV 689
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
M+E + YT +++ K + +A + M LP+ Y L+ +
Sbjct: 690 SHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAE 749
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G+ A EIF ++ + + + + +I + + ++ +E+ CKP ETY
Sbjct: 750 GQADRAKEIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETY 809
Query: 445 APL 447
A L
Sbjct: 810 AML 812
>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
Length = 1269
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 200/427 (46%), Gaps = 17/427 (3%)
Query: 106 KQYQSPDKVVEALK--GCGVSVS--NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTP 161
+++ + KV+ ++ GCG++ N L+ R S + AFGF K Y P
Sbjct: 236 REFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR--SGAVEEAFGF---KKDMEDYGLVP 290
Query: 162 E--MYNTMVDVLGKSKKFCLMWELVKEMD--ELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
+ Y +++ L KS++ L+ EM EL V A + + +R G D+A
Sbjct: 291 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL---IDGFMREGNADEAF 347
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGW 276
+ + M GV+ + L+ L K ++ A + + +D + +N++I G
Sbjct: 348 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 407
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ DA + + EM G SP+V +Y+ I C+ + K D L+EM KG KP+
Sbjct: 408 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 467
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
Y ++ + ++ A ++++KM + LPD Y+SLIF LSK GRV+++ + F
Sbjct: 468 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 527
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M+++G++PN TY+ +I + E+A +L+Q+M + KP+ Y LL+ +
Sbjct: 528 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 587
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ ++ M V +D Y L+ L SG +E A + G VP Y
Sbjct: 588 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 647
Query: 517 LEEKLEK 523
L L K
Sbjct: 648 LISGLCK 654
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 137/299 (45%), Gaps = 1/299 (0%)
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
R G A E F M K V D + L+ L K VE + K F + ++ L ++
Sbjct: 479 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 538
Query: 269 -FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
++ LIHG+ K ++ A++ ++ M G P+ V Y +E Y + D KV T K M
Sbjct: 539 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 598
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++G Y I++H L + + A +V ++ + +PD YSSLI L K
Sbjct: 599 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 658
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+ A I ++M K+GV PN++ YN +I C + A + + P+C TY L
Sbjct: 659 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 718
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
+ C+ + +L M ++ DA Y+ L G +G LE A EEM +G
Sbjct: 719 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 777
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 100/381 (26%), Positives = 174/381 (45%), Gaps = 63/381 (16%)
Query: 198 ATMSTIMRRLVRG----GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+ ++++R V G GR+ A+EA+ ++++ DT A K
Sbjct: 206 GSQHSVLQRAVEGSAARGRHGSALEAYCKVREF-------------DT---------AKK 243
Query: 254 VFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD------------ 300
V +E ++ L++ +N+LI G C++ V++A K+M G PD
Sbjct: 244 VLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLC 303
Query: 301 -----------------------VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
VV Y I+ + RE + + +KEM G +P+ I
Sbjct: 304 KSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKI 363
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++ L K Q++ A + ++M D PDT Y+ +I + KDA + +M
Sbjct: 364 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM 423
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ G+ PNV TY+ MI C E E A LL++M KP+ YAPL+ CR+ +
Sbjct: 424 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 483
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-M 516
+ + M K +V D Y SL+ GL + G++E + +F +M +G++P TY +
Sbjct: 484 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 543
Query: 517 LEEKLEKKRLGNAKERINKLL 537
+ L+ L +A++ + ++L
Sbjct: 544 IHGYLKNGDLESAEQLVQRML 564
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 151/334 (45%), Gaps = 3/334 (0%)
Query: 187 MDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
+ E+ N +S + T S ++ L + G + A + M G++ + + L+ +
Sbjct: 420 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 479
Query: 245 GNSVEHAYKVFLEFKDCIPLSS-QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
+V A ++F + L +N LI G K +V+++ K +M ++G P+ +
Sbjct: 480 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 539
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y+ I Y + D + ++ M + G KP+ + Y ++ + K+ I + ++ M
Sbjct: 540 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 599
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
+ D Y LI LS +G ++ A + ++K G VP+V Y+++IS C ++ E
Sbjct: 600 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADRE 659
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A +L +M + P+ Y L+ C+ + + + + + TY SL+
Sbjct: 660 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 719
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
G + G + A + EM++ GI P Y +L
Sbjct: 720 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVL 753
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/349 (24%), Positives = 156/349 (44%), Gaps = 4/349 (1%)
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT 232
K ++F +++ EM E G ++ T + ++ L R G ++A + M+ YG+ D
Sbjct: 234 KVREFDTAKKVLVEMRERGCG-LNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDG 292
Query: 233 RALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMK 290
L++ L K A K L+ C L + + LI G+ + D+A K +K
Sbjct: 293 FTYGALINGLCKSRRSNEA-KALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIK 351
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
EM G P+ ++Y + C+ + LK+M +P ITY +++ +
Sbjct: 352 EMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHH 411
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
+A ++ +M++ P+ YS +I L ++G + A+++ E+M +G+ PN Y
Sbjct: 412 SKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYA 471
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+IS C A ++ KM + PD Y L+ + R++ M +
Sbjct: 472 PLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQER 531
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ + TY+ L+ G +++G LE A + M+ G+ P Y L E
Sbjct: 532 GLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLE 580
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 168/385 (43%), Gaps = 37/385 (9%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++R L + G+ D A + M + DT +++++ + +S + A+++ E
Sbjct: 364 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM 423
Query: 259 KDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
++ I + ++I+IHG C++ + + A ++EM +G P+ Y I YCRE +
Sbjct: 424 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 483
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ +M + P + Y ++ L K ++ E+ K + +M+ LP+ YS L
Sbjct: 484 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 543
Query: 378 IFILSKAGRVKDANEI-----------------------------------FEDMKKQGV 402
I K G ++ A ++ F+ M QGV
Sbjct: 544 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 603
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+ + Y +I + + E A ++L +E++ PD Y+ L+ C+ +
Sbjct: 604 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 663
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY-KMLEEKL 521
+L M K V + Y +L+ GL +SG + A + F +++KG+VP TY +++
Sbjct: 664 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 723
Query: 522 EKKRLGNAKERINKLLAHAKEQKTF 546
+ + NA N++LA F
Sbjct: 724 KVGDISNAFYLYNEMLATGITPDAF 748
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 145/308 (47%), Gaps = 2/308 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T S ++ ++ G + A + + M G++ + L+++ K + +E F
Sbjct: 539 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 598
Query: 259 KD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
D + L ++I+ ILIH + ++ A + + + + G PDV Y+ I C+ D
Sbjct: 599 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 658
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
K L EM +KG P+++ Y ++ L K+ I+ A V+ + + +P+ Y+SL
Sbjct: 659 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 718
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I K G + +A ++ +M G+ P+ Y+ + + + + E A+ L+++M
Sbjct: 719 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLR-G 777
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
++ L+ C++ +M+ LL + + +A T +++ GL E+GKL +
Sbjct: 778 HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHT 837
Query: 498 FFEEMISK 505
F E+ K
Sbjct: 838 IFVELQQK 845
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 126/277 (45%), Gaps = 4/277 (1%)
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWC 277
F+ M GV D R +L+ L ++E A++V +E +P +++ LI G C
Sbjct: 595 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP-DVHVYSSLISGLC 653
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
KT + A + EM ++G P++V Y I+ C+ D + + KG P+ +
Sbjct: 654 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 713
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYT ++ K I+ A +Y +M + PD YS L S AG ++ A + E+M
Sbjct: 714 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 773
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+G ++ ++N ++ C R + + LKLL + P+ T ++ ++
Sbjct: 774 FLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKL 832
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
++ + + + A ++SL +I GK+ L
Sbjct: 833 SEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPL 869
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/345 (18%), Positives = 128/345 (37%), Gaps = 56/345 (16%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G M +Y ++ L S + ++ +++ N + S+++ L + +
Sbjct: 602 GVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEK-NGSVPDVHVYSSLISGLCKTADREK 660
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILI 273
A M K GV+ + + L+D L K + +A VF + K +P + + LI
Sbjct: 661 AFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP-NCVTYTSLI 719
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPD--------------------------------- 300
G CK + +A EM G +PD
Sbjct: 720 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 779
Query: 301 -VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+ S+ ++ +C+ ++ L + +G P+ +T ++ L +A +++E ++
Sbjct: 780 SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIF 839
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+++ +SSL F DM QG +P + + MI C
Sbjct: 840 VELQQKTSESAARHFSSL----------------FMDMINQGKIP-LDVVDDMIRDHCKE 882
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-KVLNFL 463
+ AL L + C +Y ++ CRK ++ + LN L
Sbjct: 883 GNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLL 927
>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Glycine max]
Length = 825
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 199/431 (46%), Gaps = 45/431 (10%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
T E ++ ++ +S +L + E++N + + + ++ LV+ G+ D A++
Sbjct: 129 TREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQL 188
Query: 220 FRGMKKY----GVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILI 273
+ M + G D S+++ L +E ++ K C+P +N++I
Sbjct: 189 YDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVP-HVVFYNMII 247
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G+CK + A +A+ E+ +G P V +Y I +C+ +F VD L EM +G
Sbjct: 248 DGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLN 307
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+V + V+ A K + EA ++ +M C PD + Y+ +I K GR+++A+E+
Sbjct: 308 MNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADEL 367
Query: 394 FEDMKKQGVVPNVLTYNTMISSACAR---------------------------------- 419
E K++G++PN +Y ++ + C +
Sbjct: 368 LEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVV 427
Query: 420 -SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
E + AL + +KM E PD + Y L+ C+K R+ + LL+ M +V D
Sbjct: 428 AGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYV 487
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKL- 536
+A+L+ G I +G+L+ A F+ +I KG+ P Y M++ + ++ +A +N++
Sbjct: 488 FATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMN 547
Query: 537 -LAHAKEQKTF 546
+ HA ++ T+
Sbjct: 548 SVHHAPDEYTY 558
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 189/398 (47%), Gaps = 18/398 (4%)
Query: 139 NDLTPAFGFFTWAKTQT------GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
+D FF WA T+ G H+ +++ +L + F + ELV E + +
Sbjct: 72 HDAELGLKFFDWASTRPFSCSLDGVAHS-----SLLKLLASYRVFPEI-ELVLENMKAQH 125
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK-YGVEKDTRALSVLMDTLVKGNSVEHA 251
+ S ++ G D A++ F +++ + A ++L++ LVK V+ A
Sbjct: 126 LKPTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVA 185
Query: 252 YKVF---LEFKDCIP--LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
+++ L+ D + + +I++ G C K+++ ++ +K + + P VV Y
Sbjct: 186 LQLYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNM 245
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I+ YC++ D + L E++ KG P+V TY +++ KA + ++ +M +
Sbjct: 246 IIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARG 305
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+ ++++I K G V +A E+ M + G P++ TYN MI+ +C E A
Sbjct: 306 LNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEAD 365
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+LL+K +E P+ +Y PL+ C+K + +L + + D +Y + + G+
Sbjct: 366 ELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGV 425
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ +G++++A E+M+ KG+ P Y +L L KK
Sbjct: 426 VVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKK 463
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 163/361 (45%), Gaps = 2/361 (0%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
+++N ++D K E+++ M E+ G + T + ++ +GGR ++A E
Sbjct: 311 KVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCG-PDITTYNIMINFSCKGGRIEEADELLE 369
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTR 280
K+ G+ + + + LM K A + + S + + IHG
Sbjct: 370 KAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAG 429
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++D A ++M ++G PD Y + C++ + L EM ++ +P V +
Sbjct: 430 EIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFA 489
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ + +++EA+K+++ + P Y+++I K G++ DA +M
Sbjct: 490 TLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSV 549
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
P+ TY+T+I + + +ALK+ +M + KP+ TY L+ C+K M
Sbjct: 550 HHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRA 609
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+ + M D+ + TY +LV G ++GK E A S FE M+ G +P +T+ L
Sbjct: 610 EKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLING 669
Query: 521 L 521
L
Sbjct: 670 L 670
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 135/306 (44%), Gaps = 15/306 (4%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFK 259
+ +M L + GR M V+ D + L+D ++ ++ A K+F + +
Sbjct: 454 NILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIR 513
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ +N +I G+CK K+ DA + EM +PD +Y+ I+ Y ++ D
Sbjct: 514 KGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSS 573
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+M + KP+VITYT +++ K + A KV+ MKS D +P+ Y++L+
Sbjct: 574 ALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVG 633
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS------EEENA-------- 425
KAG+ + A IFE M G +PN T++ +I+ + EE+++
Sbjct: 634 GFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLI 693
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L M D Y ++ C+ + LLT M +D+ + +L+ G
Sbjct: 694 LDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHG 753
Query: 486 LIESGK 491
L GK
Sbjct: 754 LCHKGK 759
>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
Length = 428
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 84/280 (30%), Positives = 146/280 (52%), Gaps = 2/280 (0%)
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
D + L+ L K HA ++ + + S + LI G CK+ +D AQ +
Sbjct: 9 DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
++M G +P+VV+YT I+ C+ + T+K M GC+P ++TY ++H L A
Sbjct: 69 QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128
Query: 350 KQINEA-LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
++++A L + E M +PD Y++ I L KAG++ E+ E+M + G+ P+V+T
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
+ ++IS C + ++A ++ + M E C PD TY+ +L R R+ + +L HM
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
K+ + TYA L+ LI +G +E A +E+ + G V
Sbjct: 249 KSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCV 288
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 163/348 (46%), Gaps = 7/348 (2%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFR 221
+YNT++ L K++K EL+ M NGY S+ T +T++ L + G D A +
Sbjct: 12 IYNTLIAGLCKARKPRHALELLHVMAA--NGYDASVVTYTTLIDGLCKSGDLDAAQALLQ 69
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKT 279
M G + + L+D L K A + C P +N LIHG C
Sbjct: 70 KMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEP-DLVTYNSLIHGLCMA 128
Query: 280 RKVDDAQKAMKE-MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
++DDA ++E M + G PDVV+Y FI C+ K + L+EM G P V+T
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+ ++ L KA +I++A +V++ M C+PD+ YS ++ LS+A R+ E+ E M
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
K G TY +I + + E+A ++ E C + T+ + CR +
Sbjct: 249 KSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFP 308
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
+ +L M ++ + +Y ++ GL +SG ++ A +M+ G
Sbjct: 309 LAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSG 356
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 156/337 (46%), Gaps = 6/337 (1%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
A +T++ L + + A+E M G + + L+D L K ++ A + +
Sbjct: 11 AIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQK 70
Query: 258 FKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
D C P + + LI G CK R+ DA + +K M + G PD+V+Y I C
Sbjct: 71 MADAGCAP-NVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMAN 129
Query: 316 DFRKVDDTLKE-MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
L+E M E G P V+TY + L KA ++++ L++ E+M PD +
Sbjct: 130 RMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTF 189
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S+I L KA R+ DA ++F+ M ++G VP+ LTY+ M+ + + + ++L+ M +
Sbjct: 190 CSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVK 249
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
TYAPL+ R ++ ++ + M+ T+ + + L SGK L
Sbjct: 250 SGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPL 309
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
A + MI G +P +Y + + L K GN +
Sbjct: 310 AKNILLGMIESGSLPNLLSYNFVIDGLCKS--GNVDD 344
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 101/391 (25%), Positives = 171/391 (43%), Gaps = 40/391 (10%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
GY + Y T++D L KS L+++M + ++ T + ++ L + R
Sbjct: 39 NGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCA-PNVVTYTALIDGLCKARRPH 97
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA-------------------YKVF 255
DA++ + M + G E D + L+ L N ++ A Y F
Sbjct: 98 DAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTF 157
Query: 256 ----------------LEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
LE D +S + F +I G CK ++DDA + K M ++G
Sbjct: 158 ISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGC 217
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
PD ++Y+ +++ R V++ L+ M + G TY ++HAL +A I A
Sbjct: 218 VPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASW 277
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
YE+ C+ + +++ I L ++G+ A I M + G +PN+L+YN +I C
Sbjct: 278 AYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLC 337
Query: 418 ARSEEENALKLLQKM-EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM-FKNDVSMD 475
++A KL +KM + CKPD + L+ C+ R+ LL M KN D
Sbjct: 338 KSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPD 397
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKG 506
TY +++ G + G L+ A EEM + G
Sbjct: 398 VVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 123/249 (49%), Gaps = 4/249 (1%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M + F D Y I C+ + R + L M G SV+TYT ++ L K+
Sbjct: 1 MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++ A + +KM C P+ Y++LI L KA R DA + + M + G P+++TYN+
Sbjct: 61 LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120
Query: 412 MISSACARSEEENALKLLQK-MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I C + ++A +LQ+ M E PD TY + C+ ++ +L M +
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
+S D T+ S++ GL ++ +++ A F+ M+ +G VP TY ++ + L + N
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSR---ANRL 237
Query: 531 ERINKLLAH 539
+ + ++L H
Sbjct: 238 DTVEEVLEH 246
>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
Length = 796
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/409 (26%), Positives = 187/409 (45%), Gaps = 37/409 (9%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
+ D A FF WA Q Y H P + + + F GYV
Sbjct: 203 QLQTDERVALRFFYWADRQWRYRHDP---------IRRPEAF---------------GYV 238
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
M R G+ +A+ M+K G+E D + + LV GN ++ A + F
Sbjct: 239 --------MVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVR-F 289
Query: 256 LEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
LE + + + +N LI G+C +++DA + + EM +G SPD +SY + C+
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 349
Query: 314 EKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
EK ++V +++M ++ P +TY +H L K +EAL+ + + D
Sbjct: 350 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 409
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
YS+++ + GR+ A EI +M +G +P+V+TY ++I+ C + + A K+L++M
Sbjct: 410 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 469
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ CKP+ +Y LL C+ ++ ++ +A TY+ L+ G GK
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 529
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHA 540
AC EMI KG P +L + L +++++ AK + + L +
Sbjct: 530 SEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 578
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 192/386 (49%), Gaps = 17/386 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ +V + + E+V EM + G + + T ++++ L + + D A + R
Sbjct: 411 YSAIVHSFCREGRMDKAKEIVNEM--FSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQ 468
Query: 223 MKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRK 281
M K+G + +T + + L++ L K GNS+E + + +D ++ +++L+HG+ + K
Sbjct: 469 MYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGK 528
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE---KGCKPSVIT 338
+A ++EM ++GF P V I+ C+E+ KVD+ + M++ GC +V+
Sbjct: 529 SSEACDLVREMIKKGFFPTPVEINLLIQSLCQEE---KVDEAKRFMEQCLNNGCAVNVVN 585
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+T V+H + + AL + + M + PD Y+++I L K GR+++A ++ M
Sbjct: 586 FTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKML 645
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET-YAPLLKMCCRKKRM 457
+ G++P +TY T+I C E+ LKLL+KM L + +C T Y +++ C +
Sbjct: 646 RVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKM---LSRQECRTAYNQVIEKLCSFGNL 702
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ LL + + +DA T L+ + G ++ + M ++ ++P K+
Sbjct: 703 EQAYKLLGKVLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIP---DLKLC 759
Query: 518 EEKLEKKRLGNAKERINKLLAHAKEQ 543
E+ +K L E +KL+ E+
Sbjct: 760 EKVSKKLMLEGKSEEADKLILRFVER 785
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 160/344 (46%), Gaps = 3/344 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ L K K+ + L+++M + +N T +T + L + G D+A+E R
Sbjct: 340 YYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREA 399
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
++ D S ++ + + ++ A ++ E K CIP + +I+G C+ RK
Sbjct: 400 EERRFRVDKVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIP-DVVTYTSVINGLCQERK 458
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD A+K +++M++ G P+ VSYT + C+ + + + + +E P+ ITY++
Sbjct: 459 VDQAKKMLRQMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSV 518
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+MH + + +EA + +M P + LI L + +V +A E G
Sbjct: 519 LMHGFRREGKSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNG 578
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
NV+ + T+I C + + E AL LL M PD TY ++ +K R++
Sbjct: 579 CAVNVVNFTTVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEAT 638
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L M + + TY +++ G++E E+M+S+
Sbjct: 639 KLAMKMLRVGLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR 682
>gi|356518400|ref|XP_003527867.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Glycine max]
Length = 546
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 190/379 (50%), Gaps = 6/379 (1%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
D A F Q G+ H Y T++D L + F + ++ +M +
Sbjct: 105 DPQHALNIFNMVSEQNGFQHNNATYATILDKLARCNNFHAVDRVLHQMTYETCKFHE-GI 163
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT-RALSVLMDTLVKGNSVEHAYKVFLEF 258
+M+ + ++ + A+ ++ EK + +ALS ++ L+ N V+ A K+ L
Sbjct: 164 FVNLMKHFSKSSLHEKLLHAYFSIQPIVREKPSPKALSTCLNLLLDSNRVDLARKLLLHA 223
Query: 259 KDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFS-PDVVSYTCFIEHYCREK 315
K + + FNIL+ CK +D A + ++EM FS P++V+Y+ ++ CR
Sbjct: 224 KRDLTRKPNVCVFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNG 283
Query: 316 DFRKVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
++ D +EM + P +TY ++++ + + + A V + MKS+ C P+ Y
Sbjct: 284 RVKEAFDLFEEMVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYPNVYNY 343
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S+L+ L K G+++DA + ++K G+ P+ +TY ++I+ C + + A++LL++M+E
Sbjct: 344 SALVDGLCKVGKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKE 403
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+ C+ D T+ LL CR+ + + ++ + + V ++ G+Y ++ L + +L+
Sbjct: 404 NGCQADSVTFNVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKR 463
Query: 495 ACSFFEEMISKGIVPYHST 513
A M+ +G P+++T
Sbjct: 464 AKELLGLMLRRGFQPHYAT 482
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 146/298 (48%), Gaps = 4/298 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N +V K+ +E+V+EM Y +L T ST+M L R GR +A + F
Sbjct: 235 VFNILVKYHCKNGDLDSAFEIVEEMRNSEFSYPNLVTYSTLMDGLCRNGRVKEAFDLFEE 294
Query: 223 M-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDCIPLSSQIFNILIHGWCKT 279
M + + D +VL++ +G + A V F++ C P + ++ L+ G CK
Sbjct: 295 MVSRDHIVPDPLTYNVLINGFCRGGKPDRARNVIQFMKSNGCYP-NVYNYSALVDGLCKV 353
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
K++DA+ + E+ G PD V+YT I CR + + L+EM+E GC+ +T+
Sbjct: 354 GKLEDAKGVLAEIKGSGLKPDAVTYTSLINFLCRNGKSDEAIELLEEMKENGCQADSVTF 413
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+++ L + + EAL + EK+ + Y ++ L++ +K A E+ M +
Sbjct: 414 NVLLGGLCREGKFEEALDMVEKLPQQGVYLNKGSYRIVLNSLTQKCELKRAKELLGLMLR 473
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+G P+ T N ++ C ++A L + E +P ET+ L+ + CR++++
Sbjct: 474 RGFQPHYATSNELLVCLCKAGMVDDAAVALFDLVEMGFQPGLETWEVLIGLICRERKL 531
>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 543
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 160/321 (49%), Gaps = 13/321 (4%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
++++L GR DA R ++ G + +++ + +++ A ++ D +
Sbjct: 102 LIKKLCADGRVADAE---RVVEALGPSATIITYNTMVNGYCRAGNIDAARRMI----DSV 154
Query: 263 PLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P + F N LI C V DA +M +G SP VV+Y+ ++ C+E +++
Sbjct: 155 PFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQA 214
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
L EM+ KGC+P ++TY ++++A+ + EALKV + S C PD Y+ ++
Sbjct: 215 VVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKS 274
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L + R ++A+++ M P+ +T+N +I+S C + A K+L +M E C PD
Sbjct: 275 LCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPD 334
Query: 441 CETYAPLLKMCCRKKR----MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
TY+ ++ C+++R +K+L LL M + D T+ +++ L + G + A
Sbjct: 335 IITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAI 394
Query: 497 SFFEEMISKGIVPYHSTYKML 517
+EM G +P +TY +
Sbjct: 395 KVVDEMSEHGCIPDITTYNCI 415
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/382 (27%), Positives = 183/382 (47%), Gaps = 12/382 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ L + C++ L D L+ G S+ T S ++ + Y AV
Sbjct: 163 YNPLIRAL--CVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDE 220
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M+ G E D +VL++ + V A KV L C P + + ++ C +
Sbjct: 221 MRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKP-DAVTYTPVLKSLCSSE 279
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ ++A K + +MF +PD V++ I C++ + L +M E GC P +ITY+
Sbjct: 280 RWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYS 339
Query: 341 IVMHALGKAKQINEALKVYEK----MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+M L K ++++EA+K+ ++ M S +C+PD ++++I L + G A ++ ++
Sbjct: 340 SIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDE 399
Query: 397 MKKQGVVPNVLTYNTMISS-ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M + G +P++ TYN ++ C + E AL LL M + PD TY L R+
Sbjct: 400 MSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSRED 459
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
M+ + + +S D Y +++ GL + + +LA FF M+S G +P STY
Sbjct: 460 EMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYI 519
Query: 516 MLEEKLEKKR-LGNAKERINKL 536
+L E + + L AKE + L
Sbjct: 520 ILVEGIAYEGFLEEAKELLGNL 541
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 135/271 (49%), Gaps = 7/271 (2%)
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
NILI C +V DA++ ++ + G S +++Y + YCR + +D + +
Sbjct: 100 NILIKKLCADGRVADAERVVEAL---GPSATIITYNTMVNGYCRAGN---IDAARRMIDS 153
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
P TY ++ AL + +AL V++ M C P YS L+ K K
Sbjct: 154 VPFAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQ 213
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A + ++M+ +G P+++TYN +I++ C++ + ALK+L + CKPD TY P+LK
Sbjct: 214 AVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLK 273
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C +R + + LLT MF ND + D T+ +++ L + G + A +M G P
Sbjct: 274 SLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTP 333
Query: 510 YHSTYKMLEEKLEK-KRLGNAKERINKLLAH 539
TY + + L K +R+ A + + +LLA
Sbjct: 334 DIITYSSIMDGLCKERRVDEAIKLLKELLAE 364
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/405 (26%), Positives = 185/405 (45%), Gaps = 20/405 (4%)
Query: 144 AFGFFTWAKTQTGY--MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL--AT 199
A F W Q G H MY +L K++ + +++ + ++ G S+ A
Sbjct: 93 ALKFLKWVIKQPGLELKHLTHMYCLTAHILVKARMYDSAKSILRHLCQMGIGSKSIFGAL 152
Query: 200 MST-------------IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
M T ++R ++ G D AVE F + G + ++++ ++VK
Sbjct: 153 MDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDK 212
Query: 247 SVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
E + +F E D I + FNILI+G C + A +K+M + GF P +V+Y
Sbjct: 213 RTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYN 272
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
+ YC++ ++ + + M KG + V TY + + L + +A + +KM+ +
Sbjct: 273 TLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKE 332
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
P+ Y++LI K G++ A ++F +M K + PN +TYN +I C + E A
Sbjct: 333 MISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEA 392
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L+LL ME + + TY LL C+ ++ ++ LL M ND+ + Y L+ G
Sbjct: 393 LRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDG 452
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
L ++G L+ A M G+ P TY L R+GN K
Sbjct: 453 LCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGF--CRVGNIK 495
Score = 125 bits (313), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 162/335 (48%), Gaps = 4/335 (1%)
Query: 182 ELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
L+K+M+E NG+V ++ T +T++ + GRY A+E M G+E D +V +D
Sbjct: 254 NLLKQMEE--NGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFID 311
Query: 241 TLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L + AY + + K+ I + +N LI+G+ K K+ A + EM + SP
Sbjct: 312 NLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSP 371
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+ V+Y I +C DF + L M+ G + + +TY +++ L K ++ A ++
Sbjct: 372 NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLL 431
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
E+M+ +D + Y+ LI L K G + +A ++ +M K GV P+V+TY+++I+ C
Sbjct: 432 ERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRV 491
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
++A +++ +M + Y+ L+ C+ + + M N D T
Sbjct: 492 GNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTC 551
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
LV L GKL A F M G+VP TY
Sbjct: 552 NVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITY 586
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 167/367 (45%), Gaps = 12/367 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG----GRYDDAVEA 219
YNT+++ K K + ++ EM + + L+ L+ G G +++A+
Sbjct: 341 YNTLINGFVKEGKIGVAAQVFNEMSKFD-----LSPNCVTYNALIGGHCHVGDFEEALRL 395
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWC 277
M+ G+ + L++ L K E A ++ + D + + + +LI G C
Sbjct: 396 LDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMV-VGHIAYTVLIDGLC 454
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K +D+A + + M++ G +PDV++Y+ I +CR + + + + M G + I
Sbjct: 455 KNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKI 514
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y+ +++ + + EA+KVY M + D + L+ L + G++ +A + M
Sbjct: 515 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 574
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ G+VPN +TY+ +I+ + + NA M + P TY LLK C+ +
Sbjct: 575 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 634
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + ++D+ Y +L+ +SG L A + F++M+ ++P TY L
Sbjct: 635 VEAKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSL 694
Query: 518 EEKLEKK 524
L +K
Sbjct: 695 LTGLCRK 701
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/479 (21%), Positives = 183/479 (38%), Gaps = 109/479 (22%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+++ L K +KF L L++ M +N+ V + ++ L + G D+AV+ M
Sbjct: 411 YGTLLNGLCKHEKFELAKRLLERM-RVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNM 469
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIF------------- 269
K GV D S L++ + +++ A ++ ++ + L+ I+
Sbjct: 470 YKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNV 529
Query: 270 ----------------------NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
N+L+ C+ K+ +A+K + M + G P+ ++Y C
Sbjct: 530 TEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCI 589
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQI--------------- 352
I Y D +M + G PS TY ++ L K +
Sbjct: 590 INGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPG 649
Query: 353 --------------------NEALKVYEKMKSDDCLPDTSFYSSLIFIL----------- 381
+EA+ +++KM ++ LPD+ YSSL+ L
Sbjct: 650 AVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVC 709
Query: 382 -------------------------SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
SKAG K A FE+M K+G P+ + +N +I S
Sbjct: 710 LFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSC 769
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
R + A M P+ TY LL +K+ + L + M + + D
Sbjct: 770 SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDK 829
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERIN 534
T+ SL+ GL +SG +L +MI +G + T+ +L K E ++ A + +N
Sbjct: 830 LTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVN 888
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 131/317 (41%), Gaps = 4/317 (1%)
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
G V +T++ + G +AV F M + V D+ S L+ L + A
Sbjct: 649 GAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAV 708
Query: 253 KVF---LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+F + P + ++ L+ G K A +EM ++G PD V++ I+
Sbjct: 709 CLFGTAMGRGTLFP-NHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIID 767
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
R K +D M+ G P++ TY I++H K + + L +Y M + P
Sbjct: 768 SCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFP 827
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
D + SLI LSK+G ++ M +G + + T+N +I+ + A L+
Sbjct: 828 DKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLV 887
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
M PD +TY + +K + +L M +N V Y +L+ G+
Sbjct: 888 NFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRV 947
Query: 490 GKLELACSFFEEMISKG 506
G ++ A +EM + G
Sbjct: 948 GDIQGAFKLKDEMEALG 964
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 129/313 (41%), Gaps = 4/313 (1%)
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP--LSSQIFNIL 272
+A F M K G L+ L KG ++ A K FL IP + S ++N L
Sbjct: 601 NAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKK-FLNRLHYIPGAVDSVMYNTL 659
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE-KDFRKVDDTLKEMQEKG 331
+ CK+ + +A +M Q PD +Y+ + CR+ K V M
Sbjct: 660 LAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGT 719
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P+ + YT ++ L KA A +E+M PDT ++++I S+ G++ AN
Sbjct: 720 LFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKAN 779
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ F M+ GV PN+ TYN ++ + L L M + PD T+ L+
Sbjct: 780 DFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGL 839
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
+ + LL M D T+ L+ ESGK+ A M + G+ P
Sbjct: 840 SKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDR 899
Query: 512 STYKMLEEKLEKK 524
TY + L KK
Sbjct: 900 DTYNHIFNGLNKK 912
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 110/253 (43%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FNILI+ + ++ K+ A + M G PD +Y ++ FR+ L EM
Sbjct: 867 FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 926
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
E G P Y +++ + + I A K+ ++M++ S+++ L G+ +
Sbjct: 927 ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 986
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
DA + + M + ++P + T+ T++ C ++ ALKL ME K D Y L+
Sbjct: 987 DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1046
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C L M D+ + TYA LV + + L ++ +G++
Sbjct: 1047 MGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGLI 1106
Query: 509 PYHSTYKMLEEKL 521
+ + + L+++L
Sbjct: 1107 SWGGSTQHLDKEL 1119
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/326 (21%), Positives = 135/326 (41%), Gaps = 11/326 (3%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
N++++ RR + A FF+ T + P + + + G SKK L+ L
Sbjct: 763 NAIIDSCSRR--GQMMKANDFFS---TMRWWGVCPNLATYNILLHGFSKKQALLRYLSLY 817
Query: 187 MDELNNG-YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
+ G + T +++ L + G D V+ M G D ++L++ +
Sbjct: 818 STMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSES 877
Query: 246 NSVEHAYKV--FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
+ A+ + F+ P +N + +G K ++ + EM + G P
Sbjct: 878 GKMRKAFDLVNFMNTLGVFP-DRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQ 936
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y I CR D + EM+ G + + ++ L + +A+ V + M
Sbjct: 937 YITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHML 996
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
LP + +++L+ + ++ +A ++ M+ G+ +V+ YN +I CA +
Sbjct: 997 RMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSA 1056
Query: 424 NALKLLQKM-EEDLCKPDCETYAPLL 448
A +L ++M DLC P+ TYA L+
Sbjct: 1057 AAFELYEEMRHRDLC-PNITTYAVLV 1081
>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 671
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/339 (28%), Positives = 169/339 (49%), Gaps = 13/339 (3%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
ST++ GR DDA+E GM + +T + + L E ++ +E
Sbjct: 286 STLVNGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVR 342
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
KDC+P + F++L C+ VD A + +++M + G PD V Y I + +
Sbjct: 343 KDCLP-NEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQG--- 398
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+VDD LK + C P VI++ + L +A++ ++A ++ +M +DC ++ LI
Sbjct: 399 RVDDALKLLNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILI 458
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L + GRV +A E+FE M K G P+++TY+++I+ + E+A++L Q M CK
Sbjct: 459 DSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP---CK 515
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PD Y +LK CR R + L+++M + D + T+ L+ L + G ++ A
Sbjct: 516 PDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEV 575
Query: 499 FEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
FE+M G P TY L E+ RL +A+ ++ +
Sbjct: 576 FEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTM 614
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 154/332 (46%), Gaps = 10/332 (3%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T +T++ R GR DA+ M V DT + ++ L E A +
Sbjct: 179 NVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALM 235
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E ++ P + F I +C+ +D A + + M Q G +PDVV Y+ + + +
Sbjct: 236 AEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQ 295
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+VDD ++ + CKP+ I Y + L A++ + ++ +M DCLP+ + +
Sbjct: 296 G---RVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATF 352
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S L L + G V A E+ E M K G P+ + YNT+I S + ++ALKLL M
Sbjct: 353 SMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP- 411
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C PD ++ LK CR +R L+ M + D + T+ L+ L ++G++
Sbjct: 412 --CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNN 469
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
A FE+M G P TY L L ++ L
Sbjct: 470 AIEVFEQMPKYGCTPDIVTYSSLINGLSEQGL 501
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 174/357 (48%), Gaps = 19/357 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM---DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
YN + L ++++ + +L+ EM D L N AT S + L + G D A+E
Sbjct: 317 YNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNE----ATFSMLTSCLCQNGLVDCAMEVL 372
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCK 278
M KYG D +V+ +TL+ S + L+ + +P S + FN + G C+
Sbjct: 373 EQMHKYGCRPD----AVIYNTLIYSFSEQGRVDDALKLLNSMPCSPDVISFNAALKGLCR 428
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ DDA++ + +M ++ +++ I+ C+ + ++M + GC P ++T
Sbjct: 429 AERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVT 488
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y+ +++ L + + A+++++ M C PD Y++++ L +A R +DA E+ +M
Sbjct: 489 YSSLINGLSEQGLVESAIELFQSMP---CKPDIFGYNAVLKGLCRAARWEDAGELISNMA 545
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++ PN +T+N +I+S C + + A+++ ++M + PD TY L+ + R+
Sbjct: 546 RKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLD 605
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
LL+ M DA +Y S ++GL + + + A EM+ P T+K
Sbjct: 606 DARRLLSTM---SCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFK 659
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 139/292 (47%), Gaps = 12/292 (4%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+T++ GR DDA++ M D + + + L + + A ++ ++
Sbjct: 388 NTLIYSFSEQGRVDDALKLLNSMP---CSPDVISFNAALKGLCRAERWDDAEELIVQMLR 444
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
+DC PL FNILI C+ +V++A + ++M + G +PD+V+Y+ I +
Sbjct: 445 EDC-PLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQG--- 500
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
V+ ++ Q CKP + Y V+ L +A + +A ++ M DC P+ ++ LI
Sbjct: 501 LVESAIELFQSMPCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILI 560
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L + G V A E+FE M K G P++ TYN +I+ + ++A +LL M CK
Sbjct: 561 NSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMS---CK 617
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
PD +Y LK CR +R K ++ M + + T+ R + +G
Sbjct: 618 PDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFKYANRLFVPNG 669
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 140/304 (46%), Gaps = 8/304 (2%)
Query: 234 ALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
A ++L+ L + A +V K N L+ G+C+ ++ DA++ +
Sbjct: 114 ACNILIKKLCAQRRLADAERVLDALKAAGAADPVSHNTLVAGYCRDGRLADAERLLAAAG 173
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
G + +VV+YT I YCR ++ D L + P TY V+ L A+Q
Sbjct: 174 LSGAA-NVVTYTTLINGYCRSG---RLADALALIASMPVAPDTYTYNTVLMGLCGARQWE 229
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
+A + +M + C P+ +++ I + G + A ++ + M + G P+V+ Y+T++
Sbjct: 230 DAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLV 289
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ + ++A++LL M LCKP+ Y LK C +R + + L+ M + D
Sbjct: 290 NGFSEQGRVDDAIELLNGM---LCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCL 346
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKER 532
+ T++ L L ++G ++ A E+M G P Y L E+ R+ +A +
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406
Query: 533 INKL 536
+N +
Sbjct: 407 LNSM 410
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 124/270 (45%), Gaps = 10/270 (3%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ LI+G+C++ ++ DA + M +PD +Y + C + + + + EM
Sbjct: 183 YTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGARQWEDAEALMAEMV 239
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
C P+ +T+ + A + ++ A+++ ++M C PD YS+L+ S+ GRV
Sbjct: 240 RNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVD 299
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
DA E+ M + PN + YN + C E+ +L+ +M C P+ T++ L
Sbjct: 300 DAIELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSMLT 356
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM-ISKGI 507
C+ + +L M K DA Y +L+ E G+++ A M S +
Sbjct: 357 SCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMPCSPDV 416
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
+ +++ K L +R +A+E I ++L
Sbjct: 417 ISFNAALKGL---CRAERWDDAEELIVQML 443
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 114/253 (45%), Gaps = 41/253 (16%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N + L +++++ EL+ +M + + + T + ++ L + GR ++A+E F M
Sbjct: 419 FNAALKGLCRAERWDDAEELIVQMLREDCPLIEM-TFNILIDSLCQNGRVNNAIEVFEQM 477
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---------------------------- 255
KYG D S L++ L + VE A ++F
Sbjct: 478 PKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCKPDIFGYNAVLKGLCRAARWEDA 537
Query: 256 ------LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+ KDC P + FNILI+ C+ VD A + ++M + G +PD+ +Y I
Sbjct: 538 GELISNMARKDCPP-NEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALIN 596
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
+ + ++DD + + CKP ++Y + L +A++ EA +V +M C P
Sbjct: 597 GFSEQG---RLDDARRLLSTMSCKPDAVSYNSALKGLCRAERWKEAEEVVAEMLRMKCPP 653
Query: 370 D--TSFYSSLIFI 380
+ T Y++ +F+
Sbjct: 654 NEVTFKYANRLFV 666
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 156/313 (49%), Gaps = 8/313 (2%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGV-EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD- 260
+M + GR DAV F G + GV D + +V++ + K V+ A ++ +
Sbjct: 204 LMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMDEF 263
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS-PDVVSYTCFIEHYCREKDFR 318
C P + NIL++G C+ ++V ++ ++ + + G P+VV+YT I YC+
Sbjct: 264 GCSP-DTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRME 322
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+M G P+V+TY ++++ GKA + A+ VY++M CLPD +SSLI
Sbjct: 323 DAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLI 382
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK--MEEDL 436
+ G++ DA +I+ +M + + PN T+ +I + C ++ AL L+K M D+
Sbjct: 383 DGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDI 442
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
P Y P++ + C+ ++ N +L M + D TY L+ G G++ A
Sbjct: 443 -APQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAV 501
Query: 497 SFFEEMISKGIVP 509
+FF +M+ G P
Sbjct: 502 TFFHKMVETGCSP 514
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 151/297 (50%), Gaps = 4/297 (1%)
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKV 282
++G + A + LMD + V+ A +F + S + FN++I G CK V
Sbjct: 191 QFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDV 250
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-CKPSVITYTI 341
A + ++ M + G SPD V++ + CR K+ K + L+ +Q G C P+V+TYT
Sbjct: 251 QKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTS 310
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ KA ++ +A+ VY M + P+ Y+ LI KAG + A +++ M +
Sbjct: 311 VISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRR 370
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-KVL 460
+P+V+T++++I C + ++A+K+ +M + +P+ T+ ++ C++ R + L
Sbjct: 371 CLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEAL 430
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+FL + D++ A Y ++ L + GK++ A EM KG P TY +L
Sbjct: 431 HFLKKMNMRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTIL 487
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 143/305 (46%), Gaps = 21/305 (6%)
Query: 147 FFTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM 204
F W + G +++P++ +N ++ + K ELV+ MDE ++ T + ++
Sbjct: 221 FEGWIQ---GGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTV-THNILV 276
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGV-EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP 263
L R E R +++ GV + + ++ K +E A V+ D +
Sbjct: 277 NGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVY---NDMVA 333
Query: 264 LSSQ----IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ + +N+LI+G+ K + A ++M + PDVV+++ I+ YCR +
Sbjct: 334 VGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCR---CGQ 390
Query: 320 VDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK-SDDCLPDTSFYS 375
+DD +K EM + +P+ T+ I++H K + EAL +KM D P Y+
Sbjct: 391 LDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYN 450
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I +L K G+V +AN I +M+++G P+ TY +I C + A+ KM E
Sbjct: 451 PVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVET 510
Query: 436 LCKPD 440
C PD
Sbjct: 511 GCSPD 515
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 119/270 (44%), Gaps = 39/270 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N +V+ L ++K+ E+++ + ++ T ++++ + GR +DA+ + M
Sbjct: 272 HNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDM 331
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILIHGWCKTRK 281
G + +VL++ K ++ A V+ + + C+P F+ LI G+C+ +
Sbjct: 332 VAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLP-DVVTFSSLIDGYCRCGQ 390
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK------------DFR----------- 318
+DDA K EM Q P+ ++ I +C++ + R
Sbjct: 391 LDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQAFIYN 450
Query: 319 ----------KVDDT---LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
KVD+ L EM+EKGC+P TYTI++ +I EA+ + KM
Sbjct: 451 PVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEAVTFFHKMVET 510
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
C PD+ +S I L K+G + + I
Sbjct: 511 GCSPDSIVVNSFISCLLKSGMPGEVDHIMR 540
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 119/260 (45%), Gaps = 5/260 (1%)
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF-QQGFSPDVVSYTCFIEHYCREKDFRKV 320
+P S+ + +I C++ + DA + +M Q G+ P+ + F+ C
Sbjct: 123 MPPSAHSYRYVISLMCQSGRHTDALQLFDQMTDQSGYFPNA-RFLSFLSGSCAAAGLLDA 181
Query: 321 DDTL-KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK-MKSDDCLPDTSFYSSLI 378
L + + GC Y +M ++ +A+ ++E ++ PD ++ +I
Sbjct: 182 AAALLSKASQFGCSIEAYAYNKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVI 241
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED-LC 437
+ K G V+ A E+ E M + G P+ +T+N +++ C E ++L++++ D +C
Sbjct: 242 KGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVC 301
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P+ TY ++ C+ RM+ + M S + TY L+ G ++G + A +
Sbjct: 302 MPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVA 361
Query: 498 FFEEMISKGIVPYHSTYKML 517
+++MI + +P T+ L
Sbjct: 362 VYQQMILRRCLPDVVTFSSL 381
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 190/384 (49%), Gaps = 8/384 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ L S +L+ EM + N ++ T S+I++ LV+ + +++ + M
Sbjct: 84 YNTLISGLCSSGNTEGARKLLSEMRDKNIA-ANVFTYSSIIKSLVKEAKPEESYKVLEEM 142
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
G D A + +M + N++E A +V+ + + ++ILIHG K K+
Sbjct: 143 MAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKL 202
Query: 283 DDAQKAMKEMFQQ--GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
D++ K + EM + G+ P+V++++ I CR + K + M E GCKP+ TYT
Sbjct: 203 DESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYT 262
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK- 399
++ L +A+++ +A +++EKM PD Y+SLI K G + +A +++ +M
Sbjct: 263 TLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 322
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G+ P ++T+NT+I C + A +L+ +M D TY L+ R ++
Sbjct: 323 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDE 382
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ M + +D + S V GL ++G ++ A + FE G VP T+++L E
Sbjct: 383 ALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSE 442
Query: 520 KLEKKRLGNAKERINKLLAHAKEQ 543
L K LG E KL+ AK +
Sbjct: 443 SLIK--LGRV-EDAQKLMEPAKAR 463
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/350 (26%), Positives = 169/350 (48%), Gaps = 12/350 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ + +F +L + M T +T++ L G + A + M
Sbjct: 48 YNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEM 107
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ + + S ++ +LVK E +YKV E C P FN ++ G+ ++
Sbjct: 108 RDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNP-DVFAFNGVMQGFARSNN 166
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK-----EMQEKGCKPSV 336
++ A++ + M + G+ PD VSY I + K+D++LK M+ G P+V
Sbjct: 167 MEKAREVYQHMVESGYKPDNVSYHILIHGLAK---IGKLDESLKILSEMAMRAAGYVPNV 223
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
IT++ ++H L + ++ +AL+V+ M C P+ Y++LI L +A +V A E+FE
Sbjct: 224 ITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEK 283
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL-CKPDCETYAPLLKMCCRKK 455
M + + P+ + YN++I+ C R + A KL ++M +P T+ L+ C+
Sbjct: 284 MTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLG 343
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
++ N L+ M ++ D TY L+ GL + KL+ A +++M K
Sbjct: 344 KLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREK 393
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 141/281 (50%), Gaps = 3/281 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGG 211
++GY Y+ ++ L K K +++ EM GYV ++ T ST++ L R G
Sbjct: 178 VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTG 237
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFN 270
+ A+E F M + G + + + L+ L + V A ++F + + CIP + +N
Sbjct: 238 ELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYN 297
Query: 271 ILIHGWCKTRKVDDAQKAMKEM-FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
LI G+CK +D+A+K +EM G P +V++ I+ +C+ + ++ + EM
Sbjct: 298 SLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGT 357
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
KG TY I++ L +A +++EAL+VY++M+ L D S + L K G +
Sbjct: 358 KGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQ 417
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
A +FE +K G VPN T+ + S E+A KL++
Sbjct: 418 AYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 98/198 (49%), Gaps = 1/198 (0%)
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M + C Y V+ +L KA + +AL+V+E MKS+ C+P Y+ LI AG
Sbjct: 1 MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60
Query: 387 VKDANEIFEDMKKQGVV-PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
A ++F+ MK++ V P+ TYNT+IS C+ E A KLL +M + + TY+
Sbjct: 61 FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
++K ++ + + +L M + D + +++G S +E A ++ M+
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180
Query: 506 GIVPYHSTYKMLEEKLEK 523
G P + +Y +L L K
Sbjct: 181 GYKPDNVSYHILIHGLAK 198
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 110/218 (50%), Gaps = 3/218 (1%)
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+Y ++ + + + + M+ + C PS++TY +++++ A + +AL +++ M
Sbjct: 12 AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71
Query: 363 KSDDCL-PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
K + + PD Y++LI L +G + A ++ +M+ + + NV TY+++I S ++
Sbjct: 72 KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
E + K+L++M C PD + +++ R M+ + HM ++ D +Y
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191
Query: 482 LVRGLIESGKLELACSFFEEMI--SKGIVPYHSTYKML 517
L+ GL + GKL+ + EM + G VP T+ L
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTL 229
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 104/422 (24%), Positives = 183/422 (43%), Gaps = 49/422 (11%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM-- 187
V + L D AF FF W+ T+ G+ H+ E Y + +L ++ + ++KEM
Sbjct: 111 VPRVLVELKEDPKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANSVLKEMVL 170
Query: 188 --------DEL----NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRAL 235
D L N + L+ G ++A++ F MK++ V TR+
Sbjct: 171 SKADCDVFDVLWSTRNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSC 230
Query: 236 SVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
N L+H + K K DD ++ K+M
Sbjct: 231 ----------------------------------NGLLHRFAKLGKTDDVKRFFKDMIGA 256
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G P V +Y I+ C+E D +EM+ +G P +TY ++ GK ++++
Sbjct: 257 GARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDT 316
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+ +E+MK C PD Y++LI K G++ E + +MK G+ PNV++Y+T++ +
Sbjct: 317 VCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C + A+K M P+ TY L+ C+ + L M + V +
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 436
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERIN 534
TY +L+ GL ++ +++ A F +M + G++P ++Y L K K + A E +N
Sbjct: 437 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 496
Query: 535 KL 536
+L
Sbjct: 497 EL 498
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 98/400 (24%), Positives = 191/400 (47%), Gaps = 12/400 (3%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
D+ A G F K + G + YN+M+D GK + +EM ++ +
Sbjct: 276 GDVEAARGLFEEMKFR-GLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMC-CEPDVI 333
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++ + G+ +E +R MK G++ + + S L+D K ++ A K +++
Sbjct: 334 TYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDM 393
Query: 259 K--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ +P + + LI CK + DA + EM Q G +VV+YT I+ C +
Sbjct: 394 RRVGLVP-NEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAER 452
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
++ ++ +M G P++ +Y ++H KAK ++ AL++ ++K PD Y +
Sbjct: 453 MKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGT 512
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
I+ L +++ A + +MK+ G+ N L Y T++ + L LL +M+E
Sbjct: 513 FIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELD 572
Query: 437 CKPDCETYAPLLKMCCRKKRM-KVLNFLLTHMFKNDVSM--DAGTYASLVRGLIESGKLE 493
+ T+ L+ C+ K + K +++ + ND + +A + +++ GL + ++E
Sbjct: 573 IEVTVVTFCVLIDGLCKNKLVSKAVDYF--NRISNDFGLQANAAIFTAMIDGLCKDNQVE 630
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
A + FE+M+ KG+VP + Y L + K+ GN E +
Sbjct: 631 AATTLFEQMVQKGLVPDRTAYTSLMDGNFKQ--GNVLEAL 668
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 98/352 (27%), Positives = 161/352 (45%), Gaps = 11/352 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVK-EMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
Y+T+VD K +M + +K +D G V + T ++++ + G DA
Sbjct: 370 YSTLVDAFCKEG---MMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIP-LSSQIFNILIHGWCK 278
M + GVE + + L+D L ++ A ++F ++ IP L+S +N LIHG+ K
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLAS--YNALIHGFVK 484
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ +D A + + E+ +G PD++ Y FI C + + EM+E G K + +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLI 544
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT +M A K+ E L + ++MK D + LI L K V A + F +
Sbjct: 545 YTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRIS 604
Query: 399 KQ-GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
G+ N + MI C ++ E A L ++M + PD Y L+ ++ +
Sbjct: 605 NDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNV 664
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
L M + + +D Y SLV GL +L+ A SF EEMI +GI P
Sbjct: 665 LEALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHP 716
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 143/320 (44%), Gaps = 9/320 (2%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGR 212
Q G Y ++D L +++ EL +MD G + +LA+ + ++ V+
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMD--TAGVIPNLASYNALIHGFVKAKN 487
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNI 271
D A+E +K G++ D + L +E A V E K+C I +S I+
Sbjct: 488 MDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTT 547
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM-QEK 330
L+ + K+ + + EM + VV++ I+ C+ K K D + +
Sbjct: 548 LMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDF 607
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G + + +T ++ L K Q+ A ++E+M +PD + Y+SL+ K G V +A
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEA 667
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK- 449
+ + M + G+ ++L Y +++ ++ + A L++M + PD +LK
Sbjct: 668 LALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKK 727
Query: 450 ---MCCRKKRMKVLNFLLTH 466
+ C + +++ ++L+ H
Sbjct: 728 HYELGCIDEAVELQSYLMKH 747
>gi|15233259|ref|NP_188222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274469|sp|Q9LW84.1|PP236_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g16010
gi|9294448|dbj|BAB02667.1| unnamed protein product [Arabidopsis thaliana]
gi|332642241|gb|AEE75762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 642
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 143/556 (25%), Positives = 238/556 (42%), Gaps = 63/556 (11%)
Query: 35 TTAESPSSTES-PSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISS-----RV 88
+A S S+ S SLP + F Q+ +E + S+ ES + EK ++S R+
Sbjct: 4 VSARSGSAKRSISSLPHLSQRF-KQTENEIVQMFSVPNHEESEKPQEKWKLSRKDPSVRM 62
Query: 89 LSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFF 148
L E +I KI K +K +E LK + V + LV L ++ FF
Sbjct: 63 LDER----FIRIVKIF-KWGPDAEKALEVLK---LKVDHRLVRSILE-IDVEINVKIQFF 113
Query: 149 TWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL--ATMSTIMRR 206
WA + + H Y T++ L +++ + M+ ++E+ + N YVS+ A +S +++
Sbjct: 114 KWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEV--VRNTYVSVSPAVLSELVKA 171
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIP 263
L R A+ F K + + + ++ L++ E ++V+ E DC P
Sbjct: 172 LGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP 231
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ ++ LI + K + D A + EM P YT + Y + K D
Sbjct: 232 -DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+EM+ GC P+V TYT ++ LGKA +++EA Y+ M D PD F ++L+ IL K
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNT-------------------------------- 411
GRV++ +F +M P V++YNT
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 412 ----MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
+I C + E AL LL++M+E P Y L+ + KR + N L +
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKEL 470
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLG 527
+N ++ + YA +++ + GKL A F EM ++G P Y L + K +
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 528 NAKERINKLLAHAKEQ 543
N N LL +E
Sbjct: 531 N---EANSLLRKMEEN 543
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 163/351 (46%), Gaps = 5/351 (1%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
T ++Y T++ + K K +L +EM ++ T + +++ L + GR D+A
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCS-PTVYTYTELIKGLGKAGRVDEAYGF 325
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWC 277
++ M + G+ D L+ LM+ L K VE VF E C P +N +I
Sbjct: 326 YKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVS-YNTVIKALF 384
Query: 278 KTRK-VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+++ V + +M SP +Y+ I+ YC+ K L+EM EKG P
Sbjct: 385 ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
Y +++ALGKAK+ A ++++++K + + Y+ +I K G++ +A ++F +
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
MK QG P+V YN ++S A LL+KMEE+ C+ D ++ +L R
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + + + + D TY +L+ +G E A EM KG
Sbjct: 565 PRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 184/446 (41%), Gaps = 46/446 (10%)
Query: 114 VVEALKGCGVSVSNSLVEQTLRRFSND--LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL 171
+ E ++ VSVS +++ + ++ ++ A F AK + T YN+++ +L
Sbjct: 149 IQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKC-KPTSSTYNSVILML 207
Query: 172 GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
+ + + E+ EM + + T S ++ + GR D A+ F MK ++
Sbjct: 208 MQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPT 267
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ + L+ K VE A +F E K C P + + LI G K +VD+A
Sbjct: 268 EKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSP-TVYTYTELIKGLGKAGRVDEAYGFY 326
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
K+M + G +PDVV + + ++ + EM C P+V++Y V+ AL ++
Sbjct: 327 KDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFES 386
Query: 350 K-QINEALKVYEKMKSDDCLPDTSFYS--------------------------------- 375
K ++E ++KMK+D P YS
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 446
Query: 376 --SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS--SACARSEEENALKLLQK 431
SLI L KA R + ANE+F+++K+ + Y MI C + E A+ L +
Sbjct: 447 YCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE--AVDLFNE 504
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M+ PD Y L+ + + N LL M +N D ++ ++ G +G
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 492 LELACSFFEEMISKGIVPYHSTYKML 517
A FE + GI P TY L
Sbjct: 565 PRRAIEMFETIKHSGIKPDGVTYNTL 590
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 125/255 (49%), Gaps = 5/255 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA--TMSTIMRRLVRGGRYDDAVEAFR 221
YNT++ L +SK + E+ D++ VS + T S ++ + R + A+
Sbjct: 376 YNTVIKALFESKAH--VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP-LSSQIFNILIHGWCKTR 280
M + G A L++ L K E A ++F E K+ +SS+++ ++I + K
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCG 493
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+ +A EM QG PDV +Y + + + + L++M+E GC+ + ++
Sbjct: 494 KLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHN 553
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + A++++E +K PD Y++L+ + AG ++A + +MK +
Sbjct: 554 IILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Query: 401 GVVPNVLTYNTMISS 415
G + +TY++++ +
Sbjct: 614 GFEYDAITYSSILDA 628
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 97/236 (41%), Gaps = 35/236 (14%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ P Y ++++ LGK+K++ EL KE+ E N G VS + +++ + G+
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAANELFKELKE-NFGNVSSRVYAVMIKHFGKCGKL 495
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
+AV+ F MK G D A +N L+
Sbjct: 496 SEAVDLFNEMKNQGSGPDVYA----------------------------------YNALM 521
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G K +++A +++M + G D+ S+ + + R R+ + + ++ G K
Sbjct: 522 SGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIK 581
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
P +TY ++ A EA ++ +MK D YSS++ + KD
Sbjct: 582 PDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
>gi|326490553|dbj|BAJ84940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 856
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 94/315 (29%), Positives = 156/315 (49%), Gaps = 5/315 (1%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
+D A GFF W K Q G+ H Y TM+ +LG++K+F M +L+ EM +N ++
Sbjct: 341 HDHNIALGFFHWLKRQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNC-KPTVV 399
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + I+ R +AV+ F M+ G + D L+D K +E A ++
Sbjct: 400 TYNRIIHAYGRANYLREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRM 459
Query: 259 KDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
++ + LS F + +++ K ++ A K EM G +P++V+Y I + ++
Sbjct: 460 QE-VGLSPDTFTYSAMVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARN 518
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ V ++MQ G +P ITY+IVM LG ++EA V+ +M+ D PD Y
Sbjct: 519 YDNVVKLYRDMQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRR-DWAPDEPVYGL 577
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ + KAG V A + M + G+ PNV T N+++S+ + ++A +LQ M
Sbjct: 578 LVDLWGKAGNVDKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQG 637
Query: 437 CKPDCETYAPLLKMC 451
P +TY LL C
Sbjct: 638 LVPSLQTYTLLLSCC 652
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 112/224 (50%), Gaps = 1/224 (0%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q GF D +YT I + K F + L EM CKP+V+TY ++HA G+A +
Sbjct: 356 QPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYLR 415
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EA+KV+E+M+ PD Y +LI I +K+G ++ A +++ M++ G+ P+ TY+ M+
Sbjct: 416 EAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAMV 475
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ + A KL +M ++ C P+ TY ++ + + + + L M
Sbjct: 476 NCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAGFR 535
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
D TY+ ++ L G L+ A + F EM + P Y +L
Sbjct: 536 PDKITYSIVMEVLGHCGHLDEAEAVFLEM-RRDWAPDEPVYGLL 578
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 140/299 (46%), Gaps = 10/299 (3%)
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRK 281
++ G + D + ++ L + K+ E +C P + +N +IH + +
Sbjct: 355 RQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKP-TVVTYNRIIHAYGRANY 413
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A K +EM G+ PD V+Y I+ + + D MQE G P TY+
Sbjct: 414 LREAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSA 473
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ LGK Q+ A K++ +M + C P+ Y+ +I + +KA + +++ DM+ G
Sbjct: 474 MVNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAG 533
Query: 402 VVPNVLTYNTMIS--SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-K 458
P+ +TY+ ++ C +E A+ L +M D PD Y L+ + + + K
Sbjct: 534 FRPDKITYSIVMEVLGHCGHLDEAEAVFL--EMRRDWA-PDEPVYGLLVDLWGKAGNVDK 590
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + M ++ + + T SL+ ++ + + A + M+++G+VP TY +L
Sbjct: 591 ALGWYHA-MLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLL 648
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 36/276 (13%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ MV+ LGK + ++L EM ++NG +L T + I+ + YD+ V+ +R
Sbjct: 471 YSAMVNCLGKGGQLAAAYKLFCEM--IDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRD 528
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
M+ G D S++M+ L ++ A VFLE + ++ +L+ W K V
Sbjct: 529 MQIAGFRPDKITYSIVMEVLGHCGHLDEAEAVFLEMRRDWAPDEPVYGLLVDLWGKAGNV 588
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D A M Q G P+V + + + + F+ L+ M +G PS+ TYT++
Sbjct: 589 DKALGWYHAMLQDGLQPNVPTCNSLLSAFLKLNRFQDAYGVLQNMLAQGLVPSLQTYTLL 648
Query: 343 M------HA----------------------LGKAKQINEALKVYEK-----MKSDDCLP 369
+ HA L A+ E ++ + + M S+D
Sbjct: 649 LSCCTDAHAQMGLCCQLMAITGHPAHMFLLYLPDAEPGGENVRDHARYFLDMMHSEDRES 708
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
++I L K+G ++A I+E ++ V P+
Sbjct: 709 KRGIMDAVIDFLHKSGLKEEAGFIWEVAAQRNVYPD 744
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 91/194 (46%)
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++ G K TYT ++ LG+AKQ K+ ++M S +C P Y+ +I +A +
Sbjct: 355 RQPGFKHDGHTYTTMIGILGQAKQFGTMRKLLDEMSSVNCKPTVVTYNRIIHAYGRANYL 414
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
++A ++FE+M+ G P+ +TY T+I E A+ L +M+E PD TY+ +
Sbjct: 415 REAVKVFEEMEGAGYQPDRVTYCTLIDIHAKSGYLEVAMDLYGRMQEVGLSPDTFTYSAM 474
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + ++ L M N + + TY ++ ++ + + +M G
Sbjct: 475 VNCLGKGGQLAAAYKLFCEMIDNGCTPNLVTYNIIIALQAKARNYDNVVKLYRDMQIAGF 534
Query: 508 VPYHSTYKMLEEKL 521
P TY ++ E L
Sbjct: 535 RPDKITYSIVMEVL 548
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 155/293 (52%), Gaps = 2/293 (0%)
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
+E+ ++M E + + +L T + +M +L + GR DA + F M++ GV + + L+
Sbjct: 253 FEMYEKMQE-HGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311
Query: 241 TLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L + A KV + K + + I +N LI G+C K+ A +++ +G SP
Sbjct: 312 GLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSP 371
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+V+Y + +CR+ D +KEM+E+G KPS +TYTI++ ++ + A+++
Sbjct: 372 SLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLR 431
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
M+ +PD YS LI G++ +A+ +F+ M ++ + PN + YNTMI C
Sbjct: 432 SSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKE 491
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
AL+L + MEE P+ +Y+ L+++ C+++++K L+ M + +
Sbjct: 492 GSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGI 544
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 152/316 (48%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
I+ V+ D ++ F M G + + L+ +V +S + F E K
Sbjct: 99 VIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK 158
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ L F I+I G C+ +++ + + E+ + GFSP+VV YT I+ C++ + K
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D EM + G + TYT+++H L K + ++YEKM+ P+ Y+ ++ L
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQL 278
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K GR KDA ++F++M+++GV N++TYNT+I C + A K++ +M+ + P+
Sbjct: 279 CKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNL 338
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ C ++ L + +S TY LV G G A +E
Sbjct: 339 ITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKE 398
Query: 502 MISKGIVPYHSTYKML 517
M +GI P TY +L
Sbjct: 399 MEERGIKPSKVTYTIL 414
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 166/363 (45%), Gaps = 3/363 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G++ +N ++ + S F W E + + + +++ G +
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKI--KVVLDVYSFGIVIKGCCEAGEIEK 181
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIH 274
+ + ++++G + + L+D K +E A +F E K + + + +LIH
Sbjct: 182 SFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIH 241
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G K + ++M + G P++ +Y C + C++ + EM+E+G
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSC 301
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+++TY ++ L + + NEA KV ++MKS P+ Y++LI G++ A +
Sbjct: 302 NIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLC 361
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
D+K +G+ P+++TYN ++S C + + A K++++MEE KP TY L+ R
Sbjct: 362 RDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARS 421
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
M+ L + M + + D TY+ L+ G G++ A F+ M+ K + P Y
Sbjct: 422 DNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIY 481
Query: 515 KML 517
+
Sbjct: 482 NTM 484
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 80/345 (23%), Positives = 164/345 (47%), Gaps = 4/345 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ +T++ + G + A + F M K+G+ + +VL+ L K + ++++
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMY 256
Query: 256 LEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ ++ P + +N +++ CK + DA K EM ++G S ++V+Y I CR
Sbjct: 257 EKMQEHGVFP-NLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E + + + +M+ P++ITY ++ ++ +AL + +KS P
Sbjct: 316 EMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVT 375
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ L+ + G A ++ ++M+++G+ P+ +TY +I + E A++L ME
Sbjct: 376 YNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSME 435
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E PD TY+ L+ C K +M + L M + + + Y +++ G + G
Sbjct: 436 ELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSY 495
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKR-LGNAKERINKLL 537
A F +M K + P ++Y L L K+R L A++ + K++
Sbjct: 496 RALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMI 540
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 139/331 (41%), Gaps = 55/331 (16%)
Query: 242 LVKGNSVEHAYKVFLEF---------------------KDCIPLSSQIFNILIHGWCKTR 280
L+ GN HA + L+ + S+++ ++I+ + +++
Sbjct: 49 LLSGNLYSHAQSLLLQVISGKIQSQFFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQ 108
Query: 281 KVDDAQKAMKEMFQQGFSP----------------------------------DVVSYTC 306
+D + EM +GF P DV S+
Sbjct: 109 SLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGI 168
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I+ C + K D L E++E G P+V+ YT ++ K +I +A ++ +M
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+ + Y+ LI L K G K E++E M++ GV PN+ TYN +++ C ++A
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAF 288
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
K+ +M E + TY L+ CR+ + N ++ M ++ + TY +L+ G
Sbjct: 289 KVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGF 348
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKML 517
GKL A S ++ S+G+ P TY +L
Sbjct: 349 CSVGKLGKALSLCRDLKSRGLSPSLVTYNVL 379
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 113/245 (46%), Gaps = 6/245 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFR 221
YNT++ L + K E K MD++ + ++ L T +T++ G+ A+ R
Sbjct: 306 YNTLIGGLCREMK---ANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCR 362
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTR 280
+K G+ +VL+ + A K+ E ++ I S + ILI + ++
Sbjct: 363 DLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ A + M + G PDV +Y+ I +C + + K M EK +P+ + Y
Sbjct: 423 NMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYN 482
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K AL+++ M+ + P+ + YS LI +L K ++K+A ++ E M
Sbjct: 483 TMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDS 542
Query: 401 GVVPN 405
G+ P+
Sbjct: 543 GIDPS 547
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/185 (21%), Positives = 87/185 (47%), Gaps = 1/185 (0%)
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++++A +++ ++ ++ + +M +P ++ +++L+ + + F + K
Sbjct: 97 YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ VV +V ++ +I C E E + LL ++ E P+ Y L+ CC+K ++
Sbjct: 157 IK-VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
L M K + + TY L+ GL ++G + +E+M G+ P TY +
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275
Query: 519 EKLEK 523
+L K
Sbjct: 276 NQLCK 280
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 176/365 (48%), Gaps = 8/365 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
Y+ ++ LGK + ++ L+KEM++L N Y T + +R L R G+ D+A E F
Sbjct: 230 YSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVY----TFTICIRVLGRAGKIDEAYEIF 285
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI-LIHGWCKT 279
R M G D +VL+D L +E+A ++F++ K Q+ I L+ +
Sbjct: 286 RRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDF 345
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+D ++ +M G+ PDVV++T ++ C+ +DF + T M+++G P++ TY
Sbjct: 346 GDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTY 405
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ L +A +I +ALK+ M+S P Y+ I K+G A E FE MK
Sbjct: 406 NTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKA 465
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+VPN++ N + S A + + E+ PD TY ++K + ++
Sbjct: 466 KGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDE 525
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
LL+ M +N D SL+ L ++G+++ A F+ M + P TY L
Sbjct: 526 AVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLS 585
Query: 520 KLEKK 524
L K+
Sbjct: 586 GLGKE 590
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 181/376 (48%), Gaps = 8/376 (2%)
Query: 159 HTPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDD 215
H P+ +Y T++D E +M+ +GY+ + T + ++ L + +D+
Sbjct: 328 HKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEA--DGYMPDVVTFTILVDVLCKARDFDE 385
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIH 274
A F M+K G+ + + L+ L++ +E A K+ + + ++ +NI I
Sbjct: 386 AFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFID 445
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
+ K+ + A + ++M +G P++V+ + R+ ++E G P
Sbjct: 446 YFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAP 505
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+TY ++M K Q++EA+ + +M + C PD +SLI L KAGRV +A ++F
Sbjct: 506 DSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMF 565
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ MK + P V+TYNT++S + A++L + M E C P+ ++ LL C+
Sbjct: 566 DRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKN 625
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+++ + + M D D TY +++ GLI+ K+ A FF ++ K + P H T
Sbjct: 626 DEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTI 684
Query: 515 KMLEEKLEK-KRLGNA 529
L L K ++G+A
Sbjct: 685 CTLLPGLVKCGQIGDA 700
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 195/433 (45%), Gaps = 37/433 (8%)
Query: 109 QSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMV 168
Q+P++V+ + VS V L+ ++ + F++ ++ T +HT E N
Sbjct: 71 QNPEQVMVVKGKTEIRVSEDEVLGVLKSMTDPIRALSYFYSISEFPT-VLHTTETCN--- 126
Query: 169 DVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV 228
M E ++ D++ + +A + M++ + D + F+ + G
Sbjct: 127 ----------FMLEFLRVHDKVED----MAAVFEFMQKKIIRRDLDTYLTIFKALSIRG- 171
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
R ++ +++ + K V +AY +N LIH ++ +A +
Sbjct: 172 --GLRQMTTVLNKMRKAGFVLNAYS---------------YNGLIHLLIQSGFCGEALEV 214
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+ M +G P + +Y+ + +++D V LKEM++ G +P+V T+TI + LG+
Sbjct: 215 YRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGR 274
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
A +I+EA +++ +M + C PD Y+ LI L AG++++A E+F MK G P+ +
Sbjct: 275 AGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVI 334
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y T++ + + + +ME D PD T+ L+ + C+ + M
Sbjct: 335 YITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMR 394
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLG 527
K + + TY +L+ GL+ +G++E A M S G+ P TY + + K G
Sbjct: 395 KQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETG 454
Query: 528 NAKERINKLLAHA 540
A E K+ A
Sbjct: 455 KAVETFEKMKAKG 467
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 143/293 (48%), Gaps = 2/293 (0%)
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDD 284
G+ ++ L L+ L K +AY++F +F + +S + +N LI + +
Sbjct: 747 GICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEK 806
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A K+M G +PD ++ + + + ++ + KEM + CKP ITY IV+
Sbjct: 807 AWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVIS 866
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
+L K+ +++AL + + S D P Y LI L+K GR+++A +FE+M G P
Sbjct: 867 SLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKP 926
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
N +N +I+ + E A +L ++M + +PD ++Y L+ C R+ +
Sbjct: 927 NCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYF 986
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + D Y ++ GL +S ++E A + + EM ++GIVP TY L
Sbjct: 987 NELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSL 1039
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 156/364 (42%), Gaps = 25/364 (6%)
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
+V VL K K+ +++ + + +LA+ + ++ L+ + A + F+ MK
Sbjct: 758 LVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDD 284
G D ++L+ K + ++++ E + C P + +NI+I K+ +D
Sbjct: 818 GCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKP-DAITYNIVISSLAKSNNLDK 876
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A ++ F P +Y I+ + + +EM + GCKP+ + I+++
Sbjct: 877 ALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILIN 936
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
GK A +++++M ++ PD Y+ L+ L AGRV +A F ++K G+ P
Sbjct: 937 GYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDP 996
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+ + YN +I+ E AL L +M PD TY L+ LN L
Sbjct: 997 DFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLM-----------LNLGL 1045
Query: 465 THMFKNDVSM-----------DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
M + M D TY +L+RG S E A + ++ M+ G P T
Sbjct: 1046 AGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGT 1105
Query: 514 YKML 517
Y L
Sbjct: 1106 YAQL 1109
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 163/342 (47%), Gaps = 6/342 (1%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMST 202
A+ F + G T YN ++ L + W+L K+M N G A T +
Sbjct: 771 AYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMK--NVGCAPDAFTFNM 828
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KD 260
++ + G+ + E ++ M + D ++++ +L K N+++ A F + D
Sbjct: 829 LLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSD 888
Query: 261 CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
P + + + LI G K ++++A + +EM G P+ + I Y + D
Sbjct: 889 FRP-TPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETA 947
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
K M +G +P + +YTI++ L A +++EAL + ++KS PD Y+ +I
Sbjct: 948 CQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIING 1007
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K+ R+++A ++ +M+ +G+VP++ TYN+++ + E A ++ ++++ +PD
Sbjct: 1008 LGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPD 1067
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
TY L++ + + + +M + + + GTYA L
Sbjct: 1068 VFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/425 (20%), Positives = 177/425 (41%), Gaps = 73/425 (17%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
N+++D L K+ + W++ M ++ ++ T +T++ L + GR A+E F M
Sbjct: 546 NSLIDSLYKAGRVDEAWQMFDRMKDMKLS-PTVVTYNTLLSGLGKEGRVQKAIELFESMI 604
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIP----LSSQIFNI------- 271
+ +T + + L+D K + VE A K+F + DC P ++ I+ +
Sbjct: 605 EKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVN 664
Query: 272 ----------------------LIHGWCKTRKVDDAQKAMKE-MFQ------QGFSPDVV 302
L+ G K ++ DA ++ M+Q + F D++
Sbjct: 665 HAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLM 724
Query: 303 SYTCF---------------IEHYCREKDF-----RKVDDTLKEM----------QEKGC 332
T + CRE F R + +E+ ++ G
Sbjct: 725 GGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGI 784
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P++ +Y ++ L + +A +++ MK+ C PD ++ L+ + K+G++ + E
Sbjct: 785 SPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFE 844
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
++++M + P+ +TYN +ISS + + AL + +P TY PL+
Sbjct: 845 LYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLA 904
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ R++ L M + + L+ G + G E AC F+ M+++GI P
Sbjct: 905 KVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLK 964
Query: 513 TYKML 517
+Y +L
Sbjct: 965 SYTIL 969
>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
Length = 862
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 177/370 (47%), Gaps = 3/370 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++D L K++ +++ M + + + T + ++ + G + + V M
Sbjct: 307 YNTIIDGLCKAQAVDRADGVLQHMID-KDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEM 365
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL-EFKDCIPLSSQIFNILIHGWCKTRKV 282
G++ D S+L+D L K A K+F + I + I+ IL+HG+ +
Sbjct: 366 YARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAI 425
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D + M G SP+ + + Y ++ + M + G P V+TY I+
Sbjct: 426 ADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGIL 485
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ AL K ++++A+ + +M +D P++ ++SL++ L R + A E+F +M QGV
Sbjct: 486 IDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGV 545
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PNV+ +NT++ + C + A +L+ ME +P+ +Y L+ C R
Sbjct: 546 RPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQ 605
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKL 521
LL M + D +Y +L+RG ++G+++ A F EM+ KG+ P TY +L+
Sbjct: 606 LLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLF 665
Query: 522 EKKRLGNAKE 531
+R AKE
Sbjct: 666 HTRRFSEAKE 675
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/356 (26%), Positives = 164/356 (46%), Gaps = 3/356 (0%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFRG 222
NT++ L K+ EL+ M E G + + T +TI+ L + D A +
Sbjct: 165 NTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQH 224
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
M GV+ D S ++D L K +V+ A V D + +N +I G CK +
Sbjct: 225 MIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQA 284
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD A+ ++ M +G PDVV+Y I+ C+ + + D L+ M +K KP + TY
Sbjct: 285 VDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNC 344
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H + E ++ E+M + PD YS L+ L K G+ +A +IF M ++G
Sbjct: 345 LIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKG 404
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PNV Y ++ AR + LL M + P+ + +L +K +
Sbjct: 405 IKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAM 464
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + M ++ +S D TY L+ L + G+++ A F +MI+ G+ P + L
Sbjct: 465 HIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL 520
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 184/400 (46%), Gaps = 11/400 (2%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFC-LMWELVKEMDELNNGYVSLATMST 202
AFG +TG+ + N +++ L +K+ M L++ M E ++ + +T
Sbjct: 112 AFGLIL----KTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFG-CMPNVVSCNT 166
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYG---VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
+++ L R ++A+E M + G + + ++D L K +V+ A V
Sbjct: 167 LLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMI 226
Query: 260 D-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
D + L ++ +I G CK + VD A+ ++ M +G PDVV+Y I+ C+ +
Sbjct: 227 DKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVD 286
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + L+ M +KG KP V+TY ++ L KA+ ++ A V + M D PD Y+ LI
Sbjct: 287 RAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLI 346
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
G K+ E+M +G+ P+V+TY+ ++ C + A K+ M K
Sbjct: 347 HGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIK 406
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P+ Y LL + + L LL M N +S + + ++ + ++ A
Sbjct: 407 PNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHI 466
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLL 537
F M G+ P TY +L + L K R+ +A + N+++
Sbjct: 467 FSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMI 506
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 149/314 (47%), Gaps = 1/314 (0%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNIL 272
D+A+ F M ++G+ D +L+D L K V+ A F + D + +S +FN L
Sbjct: 461 DEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL 520
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
++G C + + A++ EM+ QG P+VV + + + C E + M+ G
Sbjct: 521 VYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGV 580
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+P+VI+Y ++ A + +EA ++ + M S PD Y +L+ K GR+ +A
Sbjct: 581 RPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYC 640
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+F +M ++GV P +TY+T++ A +L M + + D TY +L C
Sbjct: 641 LFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLC 700
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ + + + D+ + T+ ++ L + G+ + A F + S G+VP
Sbjct: 701 KTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVV 760
Query: 513 TYKMLEEKLEKKRL 526
TY ++ + + ++ L
Sbjct: 761 TYCIMMKNIIQEGL 774
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 73/315 (23%), Positives = 143/315 (45%), Gaps = 3/315 (0%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-- 268
G D + M G+ + ++++ K ++ A +F LS +
Sbjct: 423 GAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQ-HGLSPDVVT 481
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ ILI CK +VDDA +M G +P+ V + + C + K ++ EM
Sbjct: 482 YGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMW 541
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
++G +P+V+ + +M L Q+ A ++ + M+ P+ Y++LI AGR
Sbjct: 542 DQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTD 601
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A ++ + M G+ P++++Y+T++ C +NA L ++M P TY+ +L
Sbjct: 602 EAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTIL 661
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ +R L +M K+ D TY ++ GL ++ ++ A F+ + SK +
Sbjct: 662 QGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLR 721
Query: 509 PYHSTYKMLEEKLEK 523
P T+ ++ + L K
Sbjct: 722 PNIITFTIMIDVLFK 736
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/285 (23%), Positives = 138/285 (48%), Gaps = 3/285 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+TIM L G+ A M++ GV + + + L+ + A + L+
Sbjct: 553 NTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQ-LLDVMV 611
Query: 261 CIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
+ L + ++ L+ G+CKT ++D+A +EM ++G +P V+Y+ ++ + F
Sbjct: 612 SVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFS 671
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + M + G + + TY I+++ L K ++EA K+++ + S D P+ ++ +I
Sbjct: 672 EAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMI 731
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+L K GR KDA ++F + G+VPNV+TY M+ + + L ME+ C
Sbjct: 732 DVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCT 791
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
PD +++ + + L+ + + + S++A T + L+
Sbjct: 792 PDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLI 836
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 142/342 (41%), Gaps = 36/342 (10%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T ++ L + GR DDAV F M GV ++ + L+ L + E A ++F
Sbjct: 479 VVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFF 538
Query: 257 EFKDCIPLSSQIF------------------------------------NILIHGWCKTR 280
E D + +F N LI G C
Sbjct: 539 EMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAG 598
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ D+A + + M G PD++SY + YC+ +EM KG P +TY+
Sbjct: 599 RTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYS 658
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L ++ +EA ++Y M D Y+ ++ L K V +A +IF+ + +
Sbjct: 659 TILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSK 718
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ PN++T+ MI +++A+ L + P+ TY ++K ++ +
Sbjct: 719 DLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEF 778
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
+ L M K+ + D+ +++R L+ G++ A ++ ++
Sbjct: 779 DNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKI 820
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 113/268 (42%), Gaps = 51/268 (19%)
Query: 320 VDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQINE---ALKVYEKMK---SDDCLPD 370
+DD LK E+ SV + +++ + +A+ + A+ ++ +M S+ PD
Sbjct: 30 IDDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPD 89
Query: 371 TSFYSSLIFILSKAGRVKDA--------------NEI----------------------F 394
YS L + GR++ NE+
Sbjct: 90 LCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILL 149
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL---CKPDCETYAPLLKMC 451
M + G +PNV++ NT++ C E AL+LL M ED C P+ TY ++
Sbjct: 150 RRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGL 209
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C+ + + +L HM V +D TY++++ GL ++ ++ A + MI KG+ P
Sbjct: 210 CKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDV 269
Query: 512 STYKMLEEKLEKKRLGNAKERINKLLAH 539
TY + + L K + A +R +L H
Sbjct: 270 VTYNTIIDGLCKAQ---AVDRAEGVLQH 294
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/345 (27%), Positives = 165/345 (47%), Gaps = 6/345 (1%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+++ +TI+ L + DA E + M + D S L+ +E A+ +
Sbjct: 206 INVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGL 265
Query: 255 FLE--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
F E K+ P FNIL+ CK + A+ + M ++G P+VV+Y+ ++ YC
Sbjct: 266 FREMVLKNINP-DYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYC 324
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
K L + + G P+ +Y +++ K K ++EAL ++ M+ PD
Sbjct: 325 LVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKV 384
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+SLI L K+GR+ A E+ ++M G N+ TYN +I + C + A+ L++K+
Sbjct: 385 TYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
++ +PD T+ L+ C+ R+K + + S++A TY +V GL + G
Sbjct: 445 KDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLF 504
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
+ A + +M GI+P TY+ L + L K + E+ KLL
Sbjct: 505 DEAEALLSKMDDNGIIPDAVTYETLIQALFHK---DENEKAEKLL 546
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 154/346 (44%), Gaps = 37/346 (10%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
MYNT++D L K K +EL +M + T S ++ G+ ++A FR
Sbjct: 210 MYNTIIDSLCKHKLVIDAYELYSQMIA-KKISPDVVTFSALIYGFCIVGQLEEAFGLFRE 268
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL---------------EFKDCIPLSSQ 267
M + D ++L+D L K +++ A + + D L +Q
Sbjct: 269 MVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQ 328
Query: 268 I---------------------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
+ + +I+G+CK + VD+A +M +G +PD V+Y
Sbjct: 329 VNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNS 388
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I+ C+ + + EM + G ++ TY ++ AL K +++A+ + +K+K
Sbjct: 389 LIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQG 448
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
PD ++ LI+ L K GR+K+A ++F+D+ +G N TYN M++ C + A
Sbjct: 449 IQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAE 508
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
LL KM+++ PD TY L++ K + LL M DV
Sbjct: 509 ALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDV 554
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 164/355 (46%), Gaps = 4/355 (1%)
Query: 196 SLATMSTIMRRLVR--GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
S+ + I+ LV+ Y A+ R ++ +G+ D ++L++ + A+
Sbjct: 65 SIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFS 124
Query: 254 VFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ + K + FN LI G C KV +A + GF D SY I C
Sbjct: 125 MMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLC 184
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ + R L+++ K K +V+ Y ++ +L K K + +A ++Y +M + PD
Sbjct: 185 KIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVV 244
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
+S+LI+ G++++A +F +M + + P+ T+N ++ + C + A +L M
Sbjct: 245 TFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVM 304
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
++ P+ TY+ L+ C ++ +L + + + +A +Y +++ G + +
Sbjct: 305 MKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMV 364
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAKEQKTF 546
+ A S F +M KGI P TY L + L K R+ A E ++++ + + F
Sbjct: 365 DEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIF 419
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 94/188 (50%), Gaps = 2/188 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+++D L KS + WELV EM + N ++ T + ++ L + D A+ + +
Sbjct: 386 YNSLIDGLCKSGRISYAWELVDEMHD-NGQPANIFTYNCLIDALCKNHHVDQAIALVKKI 444
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
K G++ D ++L+ L K +++A VF + +++ +NI+++G CK
Sbjct: 445 KDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLF 504
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
D+A+ + +M G PD V+Y I+ + + K + L+EM + ++ +V
Sbjct: 505 DEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEMV 564
Query: 343 MHALGKAK 350
+H +AK
Sbjct: 565 LHLESEAK 572
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/488 (22%), Positives = 217/488 (44%), Gaps = 63/488 (12%)
Query: 71 GWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLV 130
G+ ++ R+++ R+ S ++S N + D+ +++ +K C + + +
Sbjct: 397 GYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINV----------LIKKCRLKEAKETL 446
Query: 131 EQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEM---------------------YNTMVD 169
+ F+N L P T+ GY + Y +++
Sbjct: 447 NEM---FANGLAP--NVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIY 501
Query: 170 VLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV 228
L + KK L+ +M E +G + T +T+++ + +D+A F M++ G+
Sbjct: 502 GLIQDKKLHKAMALITKMQE--DGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 559
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
D +A +VL D L K E AY + + + L+ + L+ G+ K D A
Sbjct: 560 TPDEQAYNVLTDALCKSGRAEEAYSFLV--RKGVVLTKVTYTSLVDGFSKAGNTDFAAVL 617
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+++M +G D+ +Y+ ++ C++K + L +M G K +++ YTI++ + K
Sbjct: 618 IEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIK 677
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
+ + A ++ +M S P + Y+ I K GR+++A + +M++ GV P+V+T
Sbjct: 678 EGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVT 737
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF------ 462
YN I+ + A L++M + C+P+C TY LLK +M ++N
Sbjct: 738 YNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLK---HFLKMSLINAHYVDTS 794
Query: 463 -------------LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
LL M K+ ++ TY+S++ G ++ +LE AC + M+ K I P
Sbjct: 795 GMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISP 854
Query: 510 YHSTYKML 517
Y ML
Sbjct: 855 NEEIYTML 862
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 158/331 (47%), Gaps = 5/331 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T + ++ + GR DA+ M++ G D + L+ L G E +
Sbjct: 318 SVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLN 377
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ F LI+G+CK ++DDA + M D+ +Y I ++
Sbjct: 378 GAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKC 437
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
++ +TL EM G P+V+TYT ++ K + AL+V++ M+ + C P+ Y
Sbjct: 438 RLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYG 497
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
SLI+ L + ++ A + M++ G+ P V+TY T+I C + E +NA +L + ME++
Sbjct: 498 SLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQN 557
Query: 436 LCKPDCETYAPLLKMCCRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD + Y L C+ R + +FL+ + V + TY SLV G ++G +
Sbjct: 558 GLTPDEQAYNVLTDALCKSGRAEEAYSFLV----RKGVVLTKVTYTSLVDGFSKAGNTDF 613
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
A E+M+++G TY +L + L K++
Sbjct: 614 AAVLIEKMVNEGCKADLYTYSVLLQALCKQK 644
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 211/471 (44%), Gaps = 27/471 (5%)
Query: 77 RLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRR 136
RL R ++ V S + V ++ ++LS + + A K SV+ + V R
Sbjct: 3 RLPPLPRPAAAVASTSTPDIVAELGRVLSTRRWNKG---SAYKRLSPSVTAAHVADLFRA 59
Query: 137 FSNDLTPA--FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY 194
+ L PA FF + G+ HT + ++ +L + + D+L
Sbjct: 60 PVSPLDPATALAFFECVARRPGFRHTAASHAALLQLLARRRA-------PANYDKLVLSM 112
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+S + + +R V DA++A R + + + ++ + +L++ + E+ K+
Sbjct: 113 ISCSGTAEDVREAV------DAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKL 166
Query: 255 FLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ ++ + + +N +I +CK + A + + + G D + + YCR
Sbjct: 167 YSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCR 226
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D RK L M GC+ + +YTI++ L +A+ + EAL + M D C +
Sbjct: 227 TSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHT 286
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ LI L K GR+ DA + ++M +GVVP+V TYN MI C ++AL + ME
Sbjct: 287 YTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALME 346
Query: 434 EDLCKPDCETYAPLLKMCCRKK---RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
++ C PD TY L+ C K ++LN + F V T+ +L+ G ++
Sbjct: 347 QNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVI----TFTNLINGYCKAE 402
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHA 540
+++ A MIS Y +L L KK RL AKE +N++ A+
Sbjct: 403 RIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANG 453
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 162/370 (43%), Gaps = 7/370 (1%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
+ Y +++VL K + E + EM NG ++ T ++I+ + G A+E F
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEM--FANGLAPNVVTYTSIIDGYCKVGMVGAALEVF 481
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKT 279
+ M+ G + L+ L++ + A + + + D I + LI G CK
Sbjct: 482 KLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKK 541
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+ D+A + + M Q G +PD +Y + C+ + ++ + KG + +TY
Sbjct: 542 HEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVLTKVTY 598
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ KA + A + EKM ++ C D YS L+ L K ++ +A I + M
Sbjct: 599 TSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTV 658
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
GV N++ Y +IS + ++A L +M KP TY + C+ R++
Sbjct: 659 SGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEE 718
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L+ M ++ V+ D TY + G G ++ A S + M+ P TY +L +
Sbjct: 719 AEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLK 778
Query: 520 KLEKKRLGNA 529
K L NA
Sbjct: 779 HFLKMSLINA 788
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 170/420 (40%), Gaps = 26/420 (6%)
Query: 122 GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
GV +L++ ++ D AF F + Q G + YN + D L KS + +
Sbjct: 527 GVITYTTLIQGQCKKHEFD--NAFRLFEMME-QNGLTPDEQAYNVLTDALCKSGRAEEAY 583
Query: 182 ELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
+ + G V + T ++++ + G D A M G + D SVL+
Sbjct: 584 SFL-----VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQ 638
Query: 241 TLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L K + A + + + + + I+I K K D A+ EM G P
Sbjct: 639 ALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+YT FI YC+ + + + EM+ G P V+TY I ++ G I+ A
Sbjct: 699 SATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTL 758
Query: 360 EKMKSDDCLPDTSFYSSLI--FI---LSKAGRVKDAN-----------EIFEDMKKQGVV 403
++M C P+ Y L+ F+ L A V + ++ E M K G+
Sbjct: 759 KRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLN 818
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P V+TY+++I+ C + E A LL M P+ E Y L+K CC K
Sbjct: 819 PTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSF 878
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+T M + +Y L+ GL + G + A S F +++ +K+L + L K
Sbjct: 879 VTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLK 938
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 164/386 (42%), Gaps = 20/386 (5%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G + T Y ++VD K+ L+++M +N G L T S +++ L + + +
Sbjct: 590 GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM--VNEGCKADLYTYSVLLQALCKQKKLN 647
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILI 273
+A+ M GV+ + A ++++ ++K +HA +F E S+ + + I
Sbjct: 648 EALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFI 707
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+CK ++++A+ + EM + G +PDVV+Y FI + TLK M + C+
Sbjct: 708 SSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCE 767
Query: 334 PSVITYTIVMHALGKAKQINE----------------ALKVYEKMKSDDCLPDTSFYSSL 377
P+ TY +++ K IN ++ E+M P YSS+
Sbjct: 768 PNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSI 827
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I KA R+++A + + M + + PN Y +I C A+ + M E
Sbjct: 828 IAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGF 887
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
+P E+Y L+ C + L + D + + + L GL+++G ++
Sbjct: 888 QPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQ 947
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
M ++ +Y ML + + +
Sbjct: 948 LLAAMDNRHCRIDSESYSMLTDSIRE 973
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 187/398 (46%), Gaps = 20/398 (5%)
Query: 147 FFTW--AKTQTGYMHTPEMYNTMVDVLGKSKKF----CLMWELVKEMDELNNGYVSLATM 200
FFTW + T + + HT + Y TM+ L + L+ +V + + V A +
Sbjct: 1 FFTWLSSPTNSTFRHTLQSYCTMIHFLCTHQMLPEAKTLIQIVVSRKGKGSASAVFAAIL 60
Query: 201 ST-------------IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS 247
T I+ + G DA+E +R K++ +++ L+K
Sbjct: 61 ETKGTQRSDIYVFSGIITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKY 120
Query: 248 VEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
+ + + E +C P S FNIL+H +CK ++ AQ + + G P VVS+
Sbjct: 121 FKLVWGFYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNT 180
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
+ Y + D + K MQ G +P V TY+++++ L K ++++ +++++M
Sbjct: 181 LMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXG 240
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+P+ +++LI K GRV A EI++ M Q + P+++TYNT+I C + + + A
Sbjct: 241 LVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQ 300
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
L+ +M KPD TY L+ C++ ++ M K ++ +D Y +L+ GL
Sbjct: 301 DLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGL 360
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ G+ A EM+S G+ P TY M+ + KK
Sbjct: 361 CQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKK 398
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 129/255 (50%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M ++ G ++ + M+ GV+ D SVL++ L K + ++ ++F
Sbjct: 174 SVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELF 233
Query: 256 LEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E D +P + F LI G CK +VD A + K+M Q SPD+V+Y I C+
Sbjct: 234 DEMLDXGLVP-NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCK 292
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ D + EM KG KP ITYT ++ K + A + +M ++ D
Sbjct: 293 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVA 352
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P + TY +I+ C + + KL+++M+
Sbjct: 353 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 412
Query: 434 EDLCKPDCETYAPLL 448
D P TY L+
Sbjct: 413 RDGYVPSVVTYNVLM 427
>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
Length = 687
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 173/366 (47%), Gaps = 12/366 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ + D L ++ M L + L NG + T S ++ L + G+ A E +
Sbjct: 304 YSILFDGLSRNGDSKAMLSLFGK--SLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 361
Query: 223 MKKYGVEKDTRALSVLMDTLVKG----NSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWC 277
+ G+ TR V+ +TL+ G +E A+ F + K I +N LI+G C
Sbjct: 362 LVNAGLVP-TR---VIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLC 417
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K ++ +AQ + EM G +P V ++ I+ Y R K L EMQE G KP+V+
Sbjct: 418 KAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVV 477
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
+Y +++A K +I EA+ + + M D LP+ Y+++I + G A + E M
Sbjct: 478 SYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKM 537
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
K G+ P+++TYN +I C +S+ A +++ + PD +Y L+ CC + +
Sbjct: 538 KSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNI 597
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M K + TY L+ GL +G+L +++M+ +VP ++ + ++
Sbjct: 598 DKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIM 657
Query: 518 EEKLEK 523
E K
Sbjct: 658 VEAYSK 663
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 152/319 (47%), Gaps = 3/319 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ + R GR DAVE F M + V + + ++D +KG +E + + +
Sbjct: 200 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV- 258
Query: 261 CIPL--SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
C L ++ +N+L+ G C+ ++ + + EM Q PD +Y+ + R D +
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + + G T +I+++ L K +++ A +V + + + +P Y++LI
Sbjct: 319 AMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 378
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ G ++ A F MK + + P+ +TYN +I+ C NA LL +M+++
Sbjct: 379 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 438
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P ET+ L+ R +++ +L+ M +N + + +Y S+V ++GK+ A +
Sbjct: 439 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 498
Query: 499 FEEMISKGIVPYHSTYKML 517
++M K ++P Y +
Sbjct: 499 LDDMFHKDVLPNAQVYNAI 517
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 139/341 (40%), Gaps = 37/341 (10%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQI- 268
GR+ D AF + G DT A + + V + A + +D P +
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N++I G + + DA + EM ++ P+ ++Y I+ + + D +M
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS------ 382
G KP+ ITY +++ L +A ++ E + ++M S +PD YS L LS
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318
Query: 383 -----------------------------KAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
K G+V A E+ + + G+VP + YNT+I
Sbjct: 319 AMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 378
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ C E E A +M+ KPD TY L+ C+ +R+ LL M N V+
Sbjct: 379 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 438
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
T+ +L+ +G+LE EM G+ P +Y
Sbjct: 439 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 479
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 119/248 (47%), Gaps = 8/248 (3%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G T E +NT++D G++ + + ++ EM E N ++ + +I+ + G+
Sbjct: 435 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE-NGLKPNVVSYGSIVNAFCKNGKIP 493
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILI 273
+AV M V + + + ++D V+ + A+ + + K + I S +N+LI
Sbjct: 494 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 553
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G C ++ +A++ + + PD VSY I C + K D + M + G K
Sbjct: 554 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 613
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+V TY ++ LG A ++ E +Y+KM ++ +P + ++ ++ SK G NEI
Sbjct: 614 STVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG-----NEI 668
Query: 394 -FEDMKKQ 400
ED++K+
Sbjct: 669 KAEDLRKE 676
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 119/494 (24%), Positives = 217/494 (43%), Gaps = 56/494 (11%)
Query: 70 AGWVESHRLNEKSRISSRVLSENHETDVDKISKIL-----SKQYQSPDKVV-EALKGC-- 121
AGW H E R+ VLS + E + ++ ++ S ++ D V+ E K C
Sbjct: 135 AGW--PHLAEEAYRL---VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVF 189
Query: 122 -GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLM 180
V N L++ R + D+ A + G +N+++ L K ++F
Sbjct: 190 PDVVTHNVLIDARFR--AGDVDAAIALVD-SMANKGLKPGIVTFNSVLKGLCKHRRFDKA 246
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
E+ + MD+ + + + + ++ R G ++A++ ++ M++ GV D + S L+
Sbjct: 247 KEVFRAMDQCSVA-PDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIG 305
Query: 241 TLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
++HA E K +P I+ ++I G+C+ + +A + EM G
Sbjct: 306 LFSTRGKMDHAAAYLREMKGLGLVP-DGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCL 364
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PDVV+Y + C++ ++ L EM+E+G P + T+T ++H + +AL++
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQL 424
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ------------------ 400
++ + PD Y+SLI + + G + ANE+++DM +
Sbjct: 425 FDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCE 484
Query: 401 -----------------GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
G +PN++TYN++I C + + LQKM +D PD T
Sbjct: 485 KGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLIT 544
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
+ L+ +++ M + M K V DA TY ++ G E G +E A F++M
Sbjct: 545 FNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMG 604
Query: 504 SKGIVPYHSTYKML 517
+ GI P TY L
Sbjct: 605 ASGIEPDRYTYMSL 618
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 163/354 (46%), Gaps = 6/354 (1%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST-IMRRLVRGGRYDDA 216
TP++ ++ ++ + K ++EM L G V + T ++ R G +A
Sbjct: 294 TPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGL--GLVPDGVIYTMVIGGFCRAGSMSEA 351
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHG 275
+ M G D + L++ L K + + A ++ E K+ + F LIHG
Sbjct: 352 LRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHG 411
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+C+ + A + + Q PDVV+Y I+ CR+ D K ++ +M + P+
Sbjct: 412 YCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPN 471
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+TY+I++ + + Q+ EA ++M S LP+ Y+S+I ++G VK + +
Sbjct: 472 HVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQ 531
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M + ++P+++T+NT+I A + ME+++ +PD TY ++ +
Sbjct: 532 KMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQG 591
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
M+ + M + + D TY SL+ G + +G + A +EM+ +G P
Sbjct: 592 NMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAP 645
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/336 (25%), Positives = 151/336 (44%), Gaps = 4/336 (1%)
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQ 267
R G A EA+R + E + L++++ + K + A V E K C+
Sbjct: 134 RAGWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVV 193
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
N+LI + VD A + M +G P +V++ ++ C+ + F K + + M
Sbjct: 194 THNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAM 253
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+ P V ++ I++ + ++ EA+K Y++M+ PD +S LI + S G++
Sbjct: 254 DQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKM 313
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A +MK G+VP+ + Y +I C AL++ +M C PD TY L
Sbjct: 314 DHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTL 373
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
L C++ R+ LL M + V+ D T+ +L+ G G E A F+ ++ + +
Sbjct: 374 LNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRL 433
Query: 508 VPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAKE 542
P Y L + + K L A E + + HA+E
Sbjct: 434 RPDVVAYNSLIDGMCRKGDLAKANELWDDM--HARE 467
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 138/279 (49%), Gaps = 4/279 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ L K + EL+ EM E L T +T++ R G ++ A++ F +
Sbjct: 370 YNTLLNGLCKQHRLLDAEELLNEMKE-RGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTL 428
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ D A + L+D + + + A +++ + ++ P + ++ILI C+ +
Sbjct: 429 LHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFP-NHVTYSILIDSHCEKGQ 487
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V++A + EM +G P++++Y I+ YCR + +K L++M + P +IT+
Sbjct: 488 VEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNT 547
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H K + ++ A V+ M+ + PD Y+ +I S+ G +++A +F+ M G
Sbjct: 548 LIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASG 607
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ P+ TY ++I+ + A +L +M PD
Sbjct: 608 IEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/306 (23%), Positives = 140/306 (45%), Gaps = 36/306 (11%)
Query: 267 QIFNILIHGWCKTRKVDDAQKAMK-------------------------------EMFQQ 295
Q+F++LI + ++RK +A +A + E ++
Sbjct: 88 QVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEAYRL 147
Query: 296 GFSPD--VVSYT--CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
S D V +YT + YC+ +F K D + EM+++ P V+T+ +++ A +A
Sbjct: 148 VLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGD 207
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++ A+ + + M + P ++S++ L K R A E+F M + V P+V ++N
Sbjct: 208 VDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNI 267
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I C E E A+K ++M++ PD +++ L+ + + +M L M
Sbjct: 268 LIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLG 327
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAK 530
+ D Y ++ G +G + A +EM+ G +P TY L L K+ RL +A+
Sbjct: 328 LVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAE 387
Query: 531 ERINKL 536
E +N++
Sbjct: 388 ELLNEM 393
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 46/105 (43%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FN LIHG+ K + A M ++ PD V+Y I + + + + K+M
Sbjct: 545 FNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMG 604
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
G +P TY +++ A EA +++++M PD F
Sbjct: 605 ASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDKF 649
>gi|147841262|emb|CAN75614.1| hypothetical protein VITISV_022293 [Vitis vinifera]
Length = 590
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 212/469 (45%), Gaps = 55/469 (11%)
Query: 122 GVSVSNSLVEQTLRRFSND-LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLM 180
G +++++++ Q L S D ++ FF W ++ + H+ + TM+ L K K+F
Sbjct: 35 GSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHXHSLQSSWTMIHTLAKHKQFKTA 94
Query: 181 WELVKEM---DELNNGYVSLATM---------STIMRRLV----RGGRYDDAVEAFRGMK 224
L++ + D L++ V A + S I+ LV DA++ F M+
Sbjct: 95 QNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMR 154
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVD 283
+G + A +VL+++L K +KV+ + + + + IFN+LIH CK+ V+
Sbjct: 155 VHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVE 214
Query: 284 DAQKAMKEMFQQ-----------------------------------GFSPDVVSYTCFI 308
A++ + EM + G SPD+V+Y I
Sbjct: 215 KAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLI 274
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+CRE R+ +E+ G P+ +TYT ++ + + EAL++ E M+ +
Sbjct: 275 YGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLH 332
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P Y+S++ L + G++KDAN + +M ++ V P+ +T NT+I++ C + +A+K+
Sbjct: 333 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+KM E KPD T+ L+ C+ + L M S TY+ LV +
Sbjct: 393 KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYD 452
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
E +E+ KG+ S Y+ L +L K + ERI L+
Sbjct: 453 QDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLM 501
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 151/350 (43%), Gaps = 2/350 (0%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ G + ++N ++ KS +L+ EM E + L T +T++ + G
Sbjct: 189 VRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEM-ESRFIFPDLFTYNTLISLYCKKGM 247
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNIL 272
+ +A+ M++ GV D + L+ + + A ++F E P + + L
Sbjct: 248 HYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATP-NHVTYTTL 306
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I G+C+ +++A + + M +G P VV+Y + C E + + L EM E+
Sbjct: 307 IDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKV 366
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+P +T +++A K + A+KV +KM PD + +LI K V A E
Sbjct: 367 EPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+M G P+ TY+ ++ S + +E ++L ++ D Y L++ C
Sbjct: 427 FLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLC 486
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
+ +++ + T M + D+ Y SL ++GK A +EM
Sbjct: 487 KIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 118/239 (49%), Gaps = 2/239 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N LI+G+C+ ++ +A + +E+ G +P+ V+YT I+ YCR D + + M+
Sbjct: 270 YNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLREVME 327
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+G P V+TY ++ L + +I +A ++ +M PD ++LI K G +
Sbjct: 328 VEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMG 387
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
A ++ + M + G+ P+ T+ +I C E ++A + L +M + P TY+ L+
Sbjct: 388 SAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 447
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + + L + + + +D Y +L+R L + K+E A F M KG+
Sbjct: 448 DSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGM 506
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 121/258 (46%), Gaps = 12/258 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWEL-----VKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
Y T++D +C + +L ++E+ E+ + + T ++I+R+L G+ DA
Sbjct: 303 YTTLID------GYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANR 356
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWC 277
M + VE D + L++ K + A KV + + Q F LIHG+C
Sbjct: 357 LLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFC 416
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K +VD A++ + EM GFSP +Y+ ++ Y + + V E+ KG +
Sbjct: 417 KLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDIS 476
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y ++ L K +I A +++ M+ D+ Y+SL + KAG+ A+++ ++M
Sbjct: 477 VYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536
Query: 398 KKQGVVPNVLTYNTMISS 415
K+ ++ + Y +S
Sbjct: 537 DKRRLMITLKIYRCFSAS 554
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 128/309 (41%), Gaps = 43/309 (13%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFR 221
YNT++ + K + +E + D + G VS + T ++++ R GR +A+ FR
Sbjct: 235 YNTLISLYCKKG---MHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFR 291
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHA------------------YKVFL------- 256
+ G + + L+D + N +E A Y L
Sbjct: 292 EIN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEG 349
Query: 257 EFKDCIPLSSQIF-----------NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
+ KD L +++ N LI+ +CK + A K K+M + G PD ++
Sbjct: 350 KIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFK 409
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I +C+ + + L EM + G PS TY+ ++ + +++ +++
Sbjct: 410 ALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRK 469
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
D S Y +LI L K +++ A IF M+ +G+ + + Y ++ + + A
Sbjct: 470 GLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAA 529
Query: 426 LKLLQKMEE 434
+L +M++
Sbjct: 530 SDMLDEMDK 538
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/407 (24%), Positives = 187/407 (45%), Gaps = 35/407 (8%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y +M+ +++ +E+ MDE + AT ST++ L GR ++A++ M
Sbjct: 266 YTSMILGYCRNRDLDSAFEIFNRMDE-EGCEPNAATYSTLINGLCNSGRVNEALDFISEM 324
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIP--------LSSQ------ 267
++GV + + L +E A+K+F++ K C P +S Q
Sbjct: 325 TRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMA 384
Query: 268 -----------------IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+N L++ + ++D A M + G P+ SY I
Sbjct: 385 IGLFHRMSRDGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRG 444
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
YC D K L M + P+++TY I++ + + A++V E MK++ C PD
Sbjct: 445 YCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPD 504
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y+ LI K +++ A+ +F +M +G+ PN +TY +IS C + + A ++L+
Sbjct: 505 EWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLE 564
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
+M+ C+P+ +TY L+ ++ L M + +S D TY++++ GL +G
Sbjct: 565 RMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNG 624
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
+ LA F +M+ G +P TY L + L ++ R+ A+E ++L
Sbjct: 625 AIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSEL 671
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 172/369 (46%), Gaps = 28/369 (7%)
Query: 175 KKFCLMWELVKEMDELNN-----GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
+ +C + + K M L N +L T + I++ G D A+ MK G +
Sbjct: 443 RGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQ 502
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKA 288
D + + L+ K + +E A +F E D +++ + LI G+CK K+D A +
Sbjct: 503 PDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARM 562
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
++ M + G P+V +Y I ++ +F ++ K M E+ P V+TY+ V++ L
Sbjct: 563 LERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCN 622
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
I AL+++ KM CLP+ YSSLI L + GRV++A E+F ++KKQG++P+ +T
Sbjct: 623 NGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVT 682
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK-----MCCRKK-------- 455
Y MI + + A L +M C+P +TY L+K M K
Sbjct: 683 YVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAAS 742
Query: 456 ---------RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
V++ L + + + D + Y +L+ L SG+ A + + M+S+
Sbjct: 743 TSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQS 802
Query: 507 IVPYHSTYK 515
P TYK
Sbjct: 803 QCPNQDTYK 811
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 122/250 (48%), Gaps = 3/250 (1%)
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
I+N +I+ CK V DA+ + ++F+ G PD +YT I YCR +D + M
Sbjct: 230 IYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRM 289
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
E+GC+P+ TY+ +++ L + ++NEAL +M LP +++ I L GR+
Sbjct: 290 DEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRI 349
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+DA +IF DMKK+G PNV TY ++IS + A+ L +M D P+ TY L
Sbjct: 350 EDAWKIFIDMKKKGCKPNVYTYTSLIS---GQRVSRMAIGLFHRMSRDGVVPNTVTYNAL 406
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + + + M K+ + +Y L+RG G E A S M+
Sbjct: 407 MNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRP 466
Query: 508 VPYHSTYKML 517
P TY ++
Sbjct: 467 TPTLVTYNII 476
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 159/327 (48%), Gaps = 1/327 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + +M L+ D A+ F M K+G +T + + L+ E A +
Sbjct: 402 TYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM 461
Query: 259 KDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
P + + +NI+I G+C + D A + ++ M G PD SYT I +C+
Sbjct: 462 LKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKM 521
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
EM ++G P+ +TYT ++ K ++++ A ++ E+MK C P+ Y+ L
Sbjct: 522 ELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVL 581
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L+K A E+ + M ++ + P+V+TY+T+I+ C AL++ KM + C
Sbjct: 582 IHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGC 641
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P+ TY+ L++ ++ R++ + + + K + D TY ++ + SGK++ A
Sbjct: 642 LPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFD 701
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKK 524
F EMI+ G P TY +L + L+ +
Sbjct: 702 FLGEMINAGCQPTLQTYDVLIKGLQNE 728
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 115/494 (23%), Positives = 219/494 (44%), Gaps = 64/494 (12%)
Query: 92 NHETDVDKISKILSKQYQSPDKV-------VEALKGCGVSVSNSLVEQTLRRFSNDLTPA 144
+H+ D +K+ + +S D+ + +K C + L FS P
Sbjct: 132 SHKYGPDTFAKVAMRLLESRDRPAAVGRARIHMIKSCSNKAEMTQALNYLDMFSQR-GPK 190
Query: 145 FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM 204
G FT+ T ++ M +T++D ++++E + N L ++++
Sbjct: 191 MGLFTYT-TLLIQLNKLNMTSTVMDRY---------HQILREGLQPN-----LLIYNSVI 235
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCI 262
L + G DA + K G++ DT + ++ + ++ A+++F ++ + C
Sbjct: 236 NALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCE 295
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P ++ ++ LI+G C + +V++A + EM + G P V ++T I C D +++D
Sbjct: 296 P-NAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALC---DMGRIED 351
Query: 323 TLK---EMQEKGCKPSVITYT--------------------------------IVMHALG 347
K +M++KGCKP+V TYT +M+ L
Sbjct: 352 AWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVTYNALMNVLM 411
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
+ +I+ AL V+ M CLP+TS Y+ LI G + A + +M K P ++
Sbjct: 412 ENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLV 471
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
TYN +I C + + A+++L+ M+ + C+PD +Y L+ C+ +M++ + + M
Sbjct: 472 TYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEM 531
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLG 527
+ + TY +L+ G + KL+ A E M G P TY +L L K+
Sbjct: 532 MDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNF 591
Query: 528 NAKERINKLLAHAK 541
+ E + K++ K
Sbjct: 592 SGAEELCKVMLEEK 605
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 71/332 (21%), Positives = 137/332 (41%), Gaps = 27/332 (8%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + ++ L + + A E + M + + D S +++ L ++ A ++F
Sbjct: 574 NVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMF 633
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ C+P + ++ LI + +V++A++ E+ +QG PD V+Y IE
Sbjct: 634 NKMVKHGCLP-NLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVM 692
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT-- 371
+ D L EM GC+P++ TY +++ L + + + L S D
Sbjct: 693 SGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL-QNEMVYHKLVALPNAASTSTFDDQII 751
Query: 372 ---------------------SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
Y +L+ LS++GR +AN ++ M Q PN TY
Sbjct: 752 NKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYK 811
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+ S + + A+ + + M + C+ Y L+ C+ R K F+ M
Sbjct: 812 HFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSR 871
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
++ D + L+ GL+ +G +L F M
Sbjct: 872 ALNADEIVWTILINGLLGAGYKDLCMEFLHIM 903
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/301 (21%), Positives = 130/301 (43%), Gaps = 28/301 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+T+++ L + L E+ +M + +G + +L T S++++ L + GR ++A E F
Sbjct: 613 YSTVINGLCNNGAIPLALEMFNKM--VKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSE 670
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKT- 279
+KK G+ D +++ V V+ A+ E + C P + Q +++LI G
Sbjct: 671 LKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQP-TLQTYDVLIKGLQNEM 729
Query: 280 ---RKVDDAQKAMKEMFQ-QGFSPDVVS-----------------YTCFIEHYCREKDFR 318
+ V A F Q + DV+S Y + R +
Sbjct: 730 VYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWF 789
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ ++ + M + P+ TY + +L +A +++ A+ V++ M C + Y LI
Sbjct: 790 EANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELI 849
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L + R K+A +FE M + + + + + +I+ ++ ++ L ME +
Sbjct: 850 CTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRRN 909
Query: 439 P 439
P
Sbjct: 910 P 910
>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
Length = 1013
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 115/427 (26%), Positives = 200/427 (46%), Gaps = 17/427 (3%)
Query: 106 KQYQSPDKVVEALK--GCGVSVS--NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTP 161
+++ + KV+ ++ GCG++ N L+ R S + AFGF K Y P
Sbjct: 258 REFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR--SGAVEEAFGF---KKDMEDYGLVP 312
Query: 162 E--MYNTMVDVLGKSKKFCLMWELVKEMD--ELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
+ Y +++ L KS++ L+ EM EL V A + + +R G D+A
Sbjct: 313 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL---IDGFMREGNADEAF 369
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGW 276
+ + M GV+ + L+ L K ++ A + + +D + +N++I G
Sbjct: 370 KMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGH 429
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ DA + + EM G SP+V +Y+ I C+ + K D L+EM KG KP+
Sbjct: 430 FRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNA 489
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
Y ++ + ++ A ++++KM + LPD Y+SLIF LSK GRV+++ + F
Sbjct: 490 FVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQ 549
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M+++G++PN TY+ +I + E+A +L+Q+M + KP+ Y LL+ +
Sbjct: 550 MQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDD 609
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ ++ M V +D Y L+ L SG +E A + G VP Y
Sbjct: 610 IEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSS 669
Query: 517 LEEKLEK 523
L L K
Sbjct: 670 LISGLCK 676
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 165/329 (50%), Gaps = 3/329 (0%)
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
++G+ S A + ++ + GR DA E M+ G+ R + L+ L++ +++
Sbjct: 168 DSGHRSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMAL 227
Query: 251 AYKVFLEFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
+KV EF +S ++ + LI +CK R+ D A+K + EM ++G + V+Y I
Sbjct: 228 LWKV-REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLI 286
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
CR + K+M++ G P TY +++ L K+++ NEA + ++M +
Sbjct: 287 AGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 346
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P+ Y++LI + G +A ++ ++M GV PN +TY+ ++ C + + A L
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 406
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
L++M D +PD TY +++ R K LL+ M +S + TY+ ++ GL +
Sbjct: 407 LKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 466
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKML 517
SG+ E A EEM +KG+ P Y L
Sbjct: 467 SGEPEKASDLLEEMTTKGLKPNAFVYAPL 495
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 118/480 (24%), Positives = 217/480 (45%), Gaps = 54/480 (11%)
Query: 104 LSKQYQSPDKVVE-ALKGCGVSV---SNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMH 159
L+ +PD A+ C S+ +N L+ + +R + +P + + + H
Sbjct: 115 LAPSAPAPDAFAHLAMSLCAGSLFNLANGLLIKMIRAYP---SPPVVLASIHRALSDSGH 171
Query: 160 -TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
+P + + +VD KS + E+V M + S+ + +++ L+R DA+
Sbjct: 172 RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMA-PSIRCCNALLKDLLRA----DAMA 226
Query: 219 AFRGMKKY----GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILI 273
++++ G+ D S L++ K + A KV +E ++ L++ +N+LI
Sbjct: 227 LLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLI 286
Query: 274 H-----------------------------------GWCKTRKVDDAQKAMKEMFQQGFS 298
G CK+R+ ++A+ + EM
Sbjct: 287 AGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELK 346
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P+VV Y I+ + RE + + +KEM G +P+ ITY ++ L K Q++ A +
Sbjct: 347 PNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLL 406
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
++M D PDT Y+ +I + KDA + +M+ G+ PNV TY+ MI C
Sbjct: 407 LKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQ 466
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
E E A LL++M KP+ YAPL+ CR+ + + + M K +V D
Sbjct: 467 SGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYC 526
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKLL 537
Y SL+ GL + G++E + +F +M +G++P TY ++ L+ L +A++ + ++L
Sbjct: 527 YNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRML 586
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 137/299 (45%), Gaps = 1/299 (0%)
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
R G A E F M K V D + L+ L K VE + K F + ++ L ++
Sbjct: 501 REGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEF 560
Query: 269 -FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
++ LIHG+ K ++ A++ ++ M G P+ V Y +E Y + D KV T K M
Sbjct: 561 TYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSM 620
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++G Y I++H L + + A +V ++ + +PD YSSLI L K
Sbjct: 621 LDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADR 680
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+ A I ++M K+GV PN++ YN +I C + A + + P+C TY L
Sbjct: 681 EKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSL 740
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
+ C+ + +L M ++ DA Y+ L G +G LE A EEM +G
Sbjct: 741 IDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG 799
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/423 (23%), Positives = 190/423 (44%), Gaps = 15/423 (3%)
Query: 105 SKQYQSPDKVVEALKGCGVSVS----NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHT 160
S + Q +VV ++ G++ S N+L++ LR + L + + G +
Sbjct: 187 SGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMAL-----LWKVREFMVGAGIS 241
Query: 161 PEMY--NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
P++Y +T+++ K ++F +++ EM E G ++ T + ++ L R G ++A
Sbjct: 242 PDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCG-LNTVTYNVLIAGLCRSGAVEEAFG 300
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGW 276
+ M+ YG+ D L++ L K A K L+ C L + + LI G+
Sbjct: 301 FKKDMEDYGLVPDGFTYGALINGLCKSRRSNEA-KALLDEMSCAELKPNVVVYANLIDGF 359
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ D+A K +KEM G P+ ++Y + C+ + LK+M +P
Sbjct: 360 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 419
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
ITY +++ + +A ++ +M++ P+ YS +I L ++G + A+++ E+
Sbjct: 420 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 479
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M +G+ PN Y +IS C A ++ KM + PD Y L+ + R
Sbjct: 480 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 539
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ M + + + TY+ L+ G +++G LE A + M+ G+ P Y
Sbjct: 540 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 599
Query: 517 LEE 519
L E
Sbjct: 600 LLE 602
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/334 (22%), Positives = 151/334 (45%), Gaps = 3/334 (0%)
Query: 187 MDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
+ E+ N +S + T S ++ L + G + A + M G++ + + L+ +
Sbjct: 442 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 501
Query: 245 GNSVEHAYKVFLEFKDCIPLSS-QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
+V A ++F + L +N LI G K +V+++ K +M ++G P+ +
Sbjct: 502 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 561
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y+ I Y + D + ++ M + G KP+ + Y ++ + K+ I + ++ M
Sbjct: 562 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 621
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
+ D Y LI LS +G ++ A + ++K G VP+V Y+++IS C ++ E
Sbjct: 622 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADRE 681
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A +L +M + P+ Y L+ C+ + + + + + TY SL+
Sbjct: 682 KAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLI 741
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
G + G + A + EM++ GI P Y +L
Sbjct: 742 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVL 775
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 86/385 (22%), Positives = 168/385 (43%), Gaps = 37/385 (9%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++R L + G+ D A + M + DT +++++ + +S + A+++ E
Sbjct: 386 TYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEM 445
Query: 259 KDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
++ I + ++I+IHG C++ + + A ++EM +G P+ Y I YCRE +
Sbjct: 446 ENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNV 505
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ +M + P + Y ++ L K ++ E+ K + +M+ LP+ YS L
Sbjct: 506 SLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGL 565
Query: 378 IFILSKAGRVKDANEI-----------------------------------FEDMKKQGV 402
I K G ++ A ++ F+ M QGV
Sbjct: 566 IHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGV 625
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+ + Y +I + + E A ++L +E++ PD Y+ L+ C+ +
Sbjct: 626 MLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFG 685
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY-KMLEEKL 521
+L M K V + Y +L+ GL +SG + A + F +++KG+VP TY +++
Sbjct: 686 ILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSC 745
Query: 522 EKKRLGNAKERINKLLAHAKEQKTF 546
+ + NA N++LA F
Sbjct: 746 KVGDISNAFYLYNEMLATGITPDAF 770
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 136/344 (39%), Gaps = 55/344 (15%)
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWC 277
F+ M GV D R +L+ L ++E A++V +E +P +++ LI G C
Sbjct: 617 FKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVP-DVHVYSSLISGLC 675
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
KT + A + EM ++G P++V Y I+ C+ D + + KG P+ +
Sbjct: 676 KTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNCV 735
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYT ++ K I+ A +Y +M + PD YS L S AG ++ A + E+M
Sbjct: 736 TYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEM 795
Query: 398 ----------------------------------KKQGVVPNVLTYNTMIS--SACARSE 421
+G+VPN LT +IS S +
Sbjct: 796 FLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLS 855
Query: 422 EENAL--KLLQKMEEDLC--------------KPDCETYAPLLKMCCRKKRMKVLNFLLT 465
E + + +L QK E K + +++ C++ + L
Sbjct: 856 EVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRD 915
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ M +Y ++V L GKL A + +EM +GI P
Sbjct: 916 VIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICP 959
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 72/384 (18%), Positives = 139/384 (36%), Gaps = 55/384 (14%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G M +Y ++ L S + ++ + E N + S+++ L + +
Sbjct: 624 GVMLDNRIYGILIHNLSSSGNMEAAFRVLSGI-EKNGSVPDVHVYSSLISGLCKTADREK 682
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILI 273
A M K GV+ + + L+D L K + +A VF + K +P + + LI
Sbjct: 683 AFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP-NCVTYTSLI 741
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPD--------------------------------- 300
G CK + +A EM G +PD
Sbjct: 742 DGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRGHA 801
Query: 301 -VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+ S+ ++ +C+ ++ L + +G P+ +T ++ L +A +++E ++
Sbjct: 802 SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIF 861
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+++ +SSL F DM QG +P + + MI C
Sbjct: 862 VELQQKTSESAARHFSSL----------------FMDMINQGKIP-LDVVDDMIRDHCKE 904
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ AL L + C +Y ++ CRK ++ LL M K +
Sbjct: 905 GNLDKALMLRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGICPSENQC 964
Query: 480 ASLVRGLIESGKLELACSFFEEMI 503
L+ L SG ++ + + M+
Sbjct: 965 LILLTNLHTSGYIQEHNTVLDNML 988
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 169/333 (50%), Gaps = 3/333 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T ++ L + G D A M+ +E D + ++D+L K V+ A +F
Sbjct: 149 NLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLF 208
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+E K P + ++ LI C + DA + + +M ++ +P++V++ I+ + +
Sbjct: 209 KEMETKGIRP-NVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 267
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E F + + +M ++ P + TY +++ ++++A +++E M S DC PD
Sbjct: 268 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI K+ RV+D E+F +M +G+V + +TY T+I + +NA K+ ++M
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
D PD TY+ LL C +++ + +M K+++ +D Y +++ G+ ++GK++
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVD 447
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
F + KG+ P TY + L KRL
Sbjct: 448 DGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 163/312 (52%), Gaps = 9/312 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+L T + ++ V+ G++ +A + M K ++ D + L++ + ++ A ++F
Sbjct: 254 NLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMF 313
Query: 256 LEF---KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
EF KDC P +N LI G+CK+++V+D + +EM +G D V+YT I+
Sbjct: 314 -EFMVSKDCFP-DLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ D K+M G P ++TY+I++ L ++ +AL+V++ M+ + D
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIY 431
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+++I + KAG+V D ++F + +GV PNV+TYNTMIS C++ + A LL+KM
Sbjct: 432 IYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKM 491
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ED PD TY L++ R L+ M DA T LV ++ G+L
Sbjct: 492 KEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVANMLHDGRL 550
Query: 493 ELACSFFEEMIS 504
+ + F +M+S
Sbjct: 551 DKS---FLDMLS 559
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 166/359 (46%), Gaps = 2/359 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ + K KKF L+ L ++M L + +L T + ++ R + A+ M
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISH-NLYTYNILINCFCRRSQISLALALLGKM 71
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
K G E LS L++ G + A + + + I F LIHG K
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A + M Q+G P++V+Y + C+ D + L +M+ + V+ + +
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ +L K + +++AL ++++M++ P+ YSSLI L GR DA+++ DM ++ +
Sbjct: 192 IDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKI 251
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN++T+N +I + + A KL M + PD TY L+ C R+
Sbjct: 252 NPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQ 311
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ M D D TY +L++G +S ++E F EM +G+V TY L + L
Sbjct: 312 MFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGL 370
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 123/263 (46%), Gaps = 1/263 (0%)
Query: 263 PLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
PL S FN L+ K +K D ++M + G S ++ +Y I +CR
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLAL 65
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L +M + G +PS++T + +++ K+I++A+ + ++M PDT +++LI L
Sbjct: 66 ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 125
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+ +A + + M ++G PN++TY +++ C R + + A LL KME + D
Sbjct: 126 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADV 185
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
+ ++ C+ + + L M + + TY+SL+ L G+ A +
Sbjct: 186 VIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSD 245
Query: 502 MISKGIVPYHSTYKMLEEKLEKK 524
MI K I P T+ L + K+
Sbjct: 246 MIEKKINPNLVTFNALIDAFVKE 268
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 61/163 (37%), Gaps = 35/163 (21%)
Query: 397 MKKQGVVPNVLTYNTMISSA-----------------------------------CARSE 421
M K +P++ +N ++S+ C RS+
Sbjct: 1 MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
AL LL KM + +P T + LL C KR+ L+ M + D T+ +
Sbjct: 61 ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
L+ GL K A + + M+ +G P TY ++ L K+
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKR 163
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 153/312 (49%), Gaps = 4/312 (1%)
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDA 285
V+ + + L+ TL + V A V + + C P +NIL+ CK R A
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAP-DVVTYNILLEATCKGRGYRQA 61
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ + M +G +P+ V+Y ++ C E D + L+ + GCKPS + Y V+
Sbjct: 62 MELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKG 121
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
L A++ +A ++ +M ++C P+ + ++ +I+ L + G ++ A ++ E M K G N
Sbjct: 122 LCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTAN 181
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
++TYN +I+ C + + A+ LL KM+ CKPD TY LLK C R L+
Sbjct: 182 IVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMD 241
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK- 524
+M +N D T+ +L+ L + G + A F++M KG P TY + L K
Sbjct: 242 NMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKAT 301
Query: 525 RLGNAKERINKL 536
+L A E N++
Sbjct: 302 KLDQALELFNEM 313
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 159/325 (48%), Gaps = 4/325 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FL 256
T + ++ L G+ DA+ M G D ++L++ KG A ++ +
Sbjct: 9 TYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLM 68
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ C P ++ +N+L+ G C VDDA + ++ + G P V+Y ++ C +
Sbjct: 69 RAEGCTP-NNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAER 127
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ D+ + EM + C P+ T+ +V+++L + + +A+++ EKM C + Y++
Sbjct: 128 WGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNA 187
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L + V A + MK G P+++TYNT++ C+ + +A +L+ M ++
Sbjct: 188 IINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNG 247
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C PD T+ L+ C+K M + M + ++ TY++++ GL ++ KL+ A
Sbjct: 248 CLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQAL 307
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKL 521
F EM KG P Y++L E L
Sbjct: 308 ELFNEMGHKGFNP-DKIYQLLAECL 331
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 94/375 (25%), Positives = 179/375 (47%), Gaps = 4/375 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ K + + EL+ M + T + +M + G DDA+E R +
Sbjct: 45 YNILLEATCKGRGYRQAMELIDLM-RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNL 103
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
+G + T + ++ L A ++ E ++ P + FN++I+ C+ +
Sbjct: 104 PSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLL 163
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A + +++M + G + ++V+Y I C +++ L +M+ GCKP ++TY +
Sbjct: 164 QQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTL 223
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L A + +A ++ + M + CLPD +++LI L + G + DA E+F+ M +G
Sbjct: 224 LKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGC 283
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN +TY+T+IS ++ + AL+L +M PD + Y L + ++
Sbjct: 284 TPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQ 342
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
+ + + +S Y +++ GL +GK E A M+S G +P TY +L E L
Sbjct: 343 TVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLA 402
Query: 523 -KKRLGNAKERINKL 536
+ L A+E + KL
Sbjct: 403 YEGYLNEARELLIKL 417
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/333 (25%), Positives = 155/333 (46%), Gaps = 14/333 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ L ++++ ELV EM N + AT + ++ L R G A++ M
Sbjct: 115 YNTVLKGLCSAERWGDADELVTEMLR-ENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKM 173
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
K+G + + +++ L + +V+ A + + K C P +N L+ G C +
Sbjct: 174 SKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKP-DIVTYNTLLKGLCSAAR 232
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
DA++ M M Q G PD V++ I C++ + K+M +KGC P+ ITY+
Sbjct: 233 WVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYST 292
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L KA ++++AL+++ +M PD Y L L+ +++A + ++ G
Sbjct: 293 IISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSG 351
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+ + YN ++ C + E A+ ++ M C PD TY L++ + +
Sbjct: 352 ISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEAR 411
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
LL + DV LV LI+S L L
Sbjct: 412 ELLIKLCSRDV---------LVNSLIKSEALLL 435
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/383 (26%), Positives = 189/383 (49%), Gaps = 10/383 (2%)
Query: 161 PEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD---AV 217
P +++ VL ++ L+ E K D+L N V+L+ S + + D +
Sbjct: 39 PHVFDVFFQVLVEAG---LLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVL 95
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL--EFKDCIPLSSQIFNILIHG 275
+ F + GV +T + ++LM++L + + A+ + + EFK CIP + +I G
Sbjct: 96 KVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIP-DVVSYTTIIDG 154
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+C ++ + +KEM +G P++ +Y+ I C+ + + L+EM ++G P
Sbjct: 155 YCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPD 214
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ YT ++ K A K++ +M++ + +PD+ +S+LI LS +G+V +A+++F
Sbjct: 215 HVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFN 274
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M K+G P+ +TY +I C E + A L +M + P+ TY L C+
Sbjct: 275 EMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSG 334
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ N LL M + + ++ TY ++V GL ++G + A EEM G+ P TY
Sbjct: 335 ELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYT 394
Query: 516 MLEEKLEKK-RLGNAKERINKLL 537
L + K + A+E + ++L
Sbjct: 395 TLMDAYYKTGEMVKARELLREML 417
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 108/399 (27%), Positives = 188/399 (47%), Gaps = 39/399 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++D + + +LVKEM +L +L T S+I+ L + G+ + + R M
Sbjct: 148 YTTIIDGYCHVGELQKVVQLVKEM-QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREM 206
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
K GV D + L+D K + + AYK+F +E ++ +P S F+ LI G + K
Sbjct: 207 MKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVP-DSIAFSALICGLSGSGK 265
Query: 282 VDDAQKAMKEMFQQGFSPD-----------------------------------VVSYTC 306
V +A K EM ++GF PD VV+YT
Sbjct: 266 VVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTA 325
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
+ C+ + ++ L EM KG + ++ TY +++ L KA I +A+K+ E+MK
Sbjct: 326 LADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAG 385
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
PDT Y++L+ K G + A E+ +M +G+ P V+T+N +++ C + E+
Sbjct: 386 LHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGE 445
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+LL+ M E P+ TY ++K C + M++ + M V D+ TY L++G
Sbjct: 446 RLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGH 505
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
++ ++ A +EM+ K S+Y L + K++
Sbjct: 506 CKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRK 544
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 102/338 (30%), Positives = 170/338 (50%), Gaps = 5/338 (1%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGNSVEHAYKVFLEFKDC-IPL 264
LV G ++A + F + YGV + ++ + L K + + KVF EF +
Sbjct: 49 LVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMVLKVFSEFPQLGVCW 108
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+++ +NIL++ + K+ +A + M +G PDVVSYT I+ YC + +KV +
Sbjct: 109 NTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLV 168
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
KEMQ KG KP++ TY+ ++ L K+ ++ E KV +M PD Y++LI K
Sbjct: 169 KEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKL 228
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G + A ++F +M+ + +VP+ + ++ +I + A KL +M + +PD TY
Sbjct: 229 GNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTY 288
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L+ C+ MK FL M + ++ + TY +L GL +SG+L+ A EM
Sbjct: 289 TALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCR 348
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKE 542
KG+ STY + L K GN + + KL+ KE
Sbjct: 349 KGLQLNISTYNTIVNGLCKA--GNILQAV-KLMEEMKE 383
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 70/296 (23%), Positives = 137/296 (46%), Gaps = 36/296 (12%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M + G+ + + L D L K ++ A ++ E + + L+ +N +++G CK
Sbjct: 311 MVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGN 370
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ A K M+EM + G PD ++YT ++ Y + + K + L+EM ++G +P+V+T+ +
Sbjct: 371 ILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNV 430
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+M+ L + ++ + ++ + M +P+ + Y+S++ ++ + EI+ M QG
Sbjct: 431 LMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQG 490
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
VVP+ TYN +I C+ + MK
Sbjct: 491 VVPDSNTYNILIKGH-----------------------------------CKARNMKEAW 515
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
FL M + ++ A +Y +L++G + KL A FEEM +G+V Y +
Sbjct: 516 FLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLF 571
>gi|255569207|ref|XP_002525572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535151|gb|EEF36831.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 687
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/324 (27%), Positives = 149/324 (45%), Gaps = 14/324 (4%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE------FKDCIPL 264
GR D A+ + + V + S M L K ++ A K F E + DC
Sbjct: 338 GRSDKAINL---LNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCF-- 392
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ I+I G+CK ++ A + + EM + G +P V +YT I C+ D + L
Sbjct: 393 ---CYTIIIGGYCKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLL 449
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+ M +G P V+T+ ++ GK + +A ++ + M+S PDT Y++LI L
Sbjct: 450 QRMMLEGLIPDVVTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIAR 509
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G +A +I ++ ++G+ P+V+T+ +I + E A + M E KPD T
Sbjct: 510 GYPNEAKDILHELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTC 569
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
+ LL CR +RM N L M + D Y +L+ G +G + AC+ MI
Sbjct: 570 SALLNGYCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMID 629
Query: 505 KGIVPYHSTYKMLEEKLEKKRLGN 528
G +P +T++ EKK + N
Sbjct: 630 DGFLPNITTHRAFALGFEKKWVKN 653
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 132/542 (24%), Positives = 221/542 (40%), Gaps = 66/542 (12%)
Query: 41 SSTESPSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSR--VLSENHETDVD 98
S ++ S +K ++ P F S E +K I S+ +LSE +D
Sbjct: 3 GSISRSNITSKLKLARNKKPSSRFFSSSTLSLREKEE--DKDIIYSKFDLLSEPKSKRID 60
Query: 99 KISKILSKQYQSPD-KVVEALKGCGVSVSNSLVEQTLRRFSNDL-----TPAFG--FFTW 150
L +YQ+P+ K V +L GC L + ++ NDL AF FF
Sbjct: 61 ----FLIPEYQNPEAKCVWSL-GCSTRFITDLSQVSVLGVLNDLFGESFNAAFALYFFRL 115
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
++ +G HT ++ +L K+ + +L+ + G V + ++ +LV
Sbjct: 116 SQCCSGLEHTIRSLCRLIHILVYGKRNYRVMDLILFLVRNIGGAVGEEELCDLLFKLV-- 173
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQI 268
YD +G + S+L+D V + V A + E K + P S +
Sbjct: 174 --YDTG---------FGTKDLETVYSMLVDCYVTESKVSLALNLIHEIKLLNIFP-SMGV 221
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
N L+ ++ ++D A ++ M G + + FIE YC E + + L EM+
Sbjct: 222 CNSLLKALLRSHQLDLAWDILEGMQSFGMHLNASILSLFIESYCAEGNIQSGWKILMEMK 281
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKM-----------------------KSD 365
G K VI YTIV+ AL K + A + KM +SD
Sbjct: 282 NYGIKADVIAYTIVIDALCKISCVKVATSLLFKMIHCGISVDSVSVSSVIDGYCKKGRSD 341
Query: 366 DCL---------PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ P+ YSS + L K G + +A++ F++M + G+ P+ Y +I
Sbjct: 342 KAINLLNFFNVRPNIFVYSSFMTKLCKDGNMLEASKTFQEMSEFGLYPDCFCYTIIIGGY 401
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
C + A + L +M + P TY L+ CC+ M + +LL M + D
Sbjct: 402 CKVGDINKAFQYLGEMLKFGITPSVTTYTLLINACCKSGDMAMAEYLLQRMMLEGLIPDV 461
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGN-AKERINK 535
T+ L+ G + G L+ A + M S G+ P TY L L + N AK+ +++
Sbjct: 462 VTFNCLIDGFGKKGYLQKAFELLDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILHE 521
Query: 536 LL 537
L+
Sbjct: 522 LI 523
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 87/196 (44%), Gaps = 18/196 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFR 221
+N ++D GK +EL +D + + +S T + ++ L+ G ++A +
Sbjct: 464 FNCLIDGFGKKGYLQKAFEL---LDIMRSAGMSPDTVTYNALIHSLIARGYPNEAKDILH 520
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSSQIFNILIHG 275
+ + G+ D + ++D K + E A+ V+ D + S+ L++G
Sbjct: 521 ELIRRGLSPDVMTFTDVIDGFSKKGNFEEAFLVWSYMSERHVKPDVVTCSA-----LLNG 575
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+C+ R++D+A +M G PD+V Y I +C + + + M + G P+
Sbjct: 576 YCRARRMDEANALFLKMLDAGLKPDLVLYNNLIHGFCSAGNMNAACNLVAMMIDDGFLPN 635
Query: 336 VITYTIVMHALGKAKQ 351
+ T+ ALG K+
Sbjct: 636 ITTHR--AFALGFEKK 649
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 166/342 (48%), Gaps = 5/342 (1%)
Query: 180 MWELVKEMDE-LNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
+WE + +E L G V L + S+I+ R G A+ F MK G+ DT ++
Sbjct: 345 VWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTI 404
Query: 238 LMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
L++ + + V A K+ E + C+ + +N L++G C+ + +DDA + KEM ++
Sbjct: 405 LINGYCRNDDVSGALKMRNEMVERGCV-MDVVTYNTLLNGLCRGKMLDDADELFKEMVER 463
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G PD + T I YC++ + K + M + KP V+TY +M K ++ +A
Sbjct: 464 GVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKA 523
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+++ M S + P +S LI G V +A ++++MK++G+ P ++T NT+I
Sbjct: 524 KELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKG 583
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
A L M + PDC TY L+ +++ FL+ +M + + +
Sbjct: 584 YLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPN 643
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
TY +++ G G+++ A +MI KGI P STY L
Sbjct: 644 LVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSL 685
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 110/476 (23%), Positives = 222/476 (46%), Gaps = 21/476 (4%)
Query: 48 LPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQ 107
LP+ I+ S SP+ + + V+S +L E + R++ ++ + V+ I ++S
Sbjct: 85 LPNLIQTIASTSPNPSIIATLIHFLVQSKKLPEAQSLLLRIIRKSGVSHVEVIDSLISTS 144
Query: 108 YQSPDKVVEALKGCGVSVSNSLVEQTLR-RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNT 166
+ + V V + L+ ++ R + + AF + G+ + N
Sbjct: 145 SSNLNSNQN------VVVFDLLIRTYVQARKLREGSEAFQLLR----KRGFCVSINACNA 194
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
++ + K L W++ ++ + N V++ T++ ++ L + G+ D+ M++
Sbjct: 195 LLGAIVKVGWVDLAWKVYEDFVKSGN-IVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEK 253
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP---LSSQIF--NILIHGWCKTRK 281
GV D + L++ + V A+ + DC+ L +F N LI+G CK
Sbjct: 254 GVYADLVTYNTLVNAYCRRGLVSEAFGLV----DCMAGKGLKPGLFTYNALINGLCKEGS 309
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ A++ + EM G P+ ++ + CR++D + + EM ++G P +I+++
Sbjct: 310 YERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSS 369
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ + ++ AL +EKMK +PDT Y+ LI + V A ++ +M ++G
Sbjct: 370 IVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERG 429
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
V +V+TYNT+++ C ++A +L ++M E PD T L+ C+ M
Sbjct: 430 CVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKAL 489
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M + D TY +L+ G + G++E A + +MIS+ I P + ++ +L
Sbjct: 490 SLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSIL 545
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 136/279 (48%), Gaps = 4/279 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ L + K EL KEM E + T++T++ + G A+ F M
Sbjct: 437 YNTLLNGLCRGKMLDDADELFKEMVE-RGVFPDFYTLTTLIHGYCKDGNMTKALSLFETM 495
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
++ D + LMD K +E A +++ + ++ P S F+ILI+G+C
Sbjct: 496 TLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFP-SYISFSILINGFCSLGL 554
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V +A + EM ++G P +V+ I+ Y R + K +D L M +G P ITY
Sbjct: 555 VSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNT 614
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++ K + + A + M+ LP+ Y++++ S+ GR+++A + M +G
Sbjct: 615 LINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKG 674
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ P+ TY ++I+ ++ + A ++ +M + PD
Sbjct: 675 INPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 95/214 (44%), Gaps = 8/214 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YNT++D K + EL +M E+ Y+S S ++ G +A +
Sbjct: 507 YNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISF---SILINGFCSLGLVSEAFRLWD 563
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILIHGWCKT 279
MK+ G++ + ++ ++ ++ A FL + +P +N LI+ + K
Sbjct: 564 EMKEKGIKPTLVTCNTIIKGYLRAGNLSKAND-FLNTMISEGVPPDCITYNTLINSFVKE 622
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
D A + M ++G P++V+Y + + R ++ + L +M +KG P TY
Sbjct: 623 ENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTY 682
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
T +++ + EA +V+++M +PD F
Sbjct: 683 TSLINGYVSKDNMKEAFRVHDEMLQRGFVPDDKF 716
>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
Length = 554
Score = 145 bits (367), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 169/362 (46%), Gaps = 4/362 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ + D L ++ M L + L NG + T S ++ L + G+ A E +
Sbjct: 171 YSILFDGLSRNGDSKAMLSLFGKY--LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 228
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
+ G+ + L++ + +E A+ F + K I +N LI+G CK +
Sbjct: 229 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 288
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +AQ + EM G +P V ++ I+ Y R K L EMQE G KP+V++Y
Sbjct: 289 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 348
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++A K +I EA+ + + M D LP+ Y+++I + G A + E MK G
Sbjct: 349 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 408
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+++TYN +I C +S+ A +++ + PD +Y L+ CC + +
Sbjct: 409 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 468
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M K + TY L+ GL +G+L +++M+ +VP ++ + ++ E
Sbjct: 469 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 528
Query: 522 EK 523
K
Sbjct: 529 SK 530
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 153/319 (47%), Gaps = 3/319 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ + R GR DAVE F M + V + + ++D +KG +E +++ +
Sbjct: 67 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV- 125
Query: 261 CIPL--SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
C L ++ +N+L+ G C+ ++ + + EM Q PD +Y+ + R D +
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + + G T +I+++ L K +++ A +V + + + +P Y++LI
Sbjct: 186 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 245
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ G ++ A F MK + + P+ +TYN +I+ C NA LL +M+++
Sbjct: 246 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 305
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P ET+ L+ R +++ +L+ M +N + + +Y S+V ++GK+ A +
Sbjct: 306 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 365
Query: 499 FEEMISKGIVPYHSTYKML 517
++M K ++P Y +
Sbjct: 366 LDDMFHKDVLPNAQVYNAI 384
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 193/478 (40%), Gaps = 63/478 (13%)
Query: 88 VLSENHETDVDKISKILSKQYQSPDKVV--EALKGCGVSVSNSLVEQTLRRFSNDLTPAF 145
+LS DV + IL+ PD +A++ C + LRR D P
Sbjct: 2 LLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPP 61
Query: 146 GFFTWAKTQTGYMHTP----------EM-----------YNTMVDVLGKSKKFCLMWELV 184
F++ G EM YNTM+D K + L
Sbjct: 62 NAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLR 121
Query: 185 KEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
+M + +G A T + ++ L R GR + M + D S+L D L
Sbjct: 122 DQM--VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 179
Query: 244 KGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
+ + +F ++ K+ + + +IL++G CK KV A++ ++ + G P V
Sbjct: 180 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 239
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
Y I YC+ + T +M+ + KP ITY +++ L KA++I A + +M
Sbjct: 240 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 299
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+ + P +++LI + G+++ + +M++ G+ PNV++Y +++++ C +
Sbjct: 300 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 359
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
A+ +L MF DV +A Y ++
Sbjct: 360 PEAVAILDD-----------------------------------MFHKDVLPNAQVYNAI 384
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAH 539
+ +E G + A E+M S GI P TY +L + L + ++ A+E IN L H
Sbjct: 385 IDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNH 442
>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 874
Score = 145 bits (367), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 95/351 (27%), Positives = 172/351 (49%), Gaps = 24/351 (6%)
Query: 191 NNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
N +++L + + + L+R G+ +A + M G+E D + +++MD L K +
Sbjct: 320 NANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSD 379
Query: 251 AYKVF-LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
A + L ++ I + ++ L+HG+C KV +A + EM SP+ + +
Sbjct: 380 ARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLH 439
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS----- 364
+E + ++ L++M EKG +T I+++AL Q+++A+++ M +
Sbjct: 440 SLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAA 499
Query: 365 ------------DD------CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
DD C PD YS++I L KAGR+ DA + F +M +G+ P+
Sbjct: 500 LGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDS 559
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
Y+T I S C + +A ++L+ ME+ C +TY L+ K ++ L L+
Sbjct: 560 AIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDE 619
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M + VS D TY ++ L E G++ A S +EM+ KGI P S++++L
Sbjct: 620 MREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRIL 670
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 99/363 (27%), Positives = 160/363 (44%), Gaps = 43/363 (11%)
Query: 160 TPEMY--NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
+P Y N ++ L K + L+++M+E G V T + I+ L G+ D A+
Sbjct: 428 SPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYG-VDTVTCNIIINALCNNGQLDKAI 486
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
E GM +G + AL L GNS + K C P ++ +I G C
Sbjct: 487 EIVNGMWTHG----SAALGNL------GNSFIGLVDDTISGKKCTP-DLVTYSTIISGLC 535
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K ++DDA+K EM +G PD Y FI +CRE LK+M+++GC ++
Sbjct: 536 KAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQ 595
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++ LG QI E + ++M+ PD Y+ ++ L + GR+ DA + ++M
Sbjct: 596 TYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEM 655
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
++G+ PN+ ++ +I + C + K E + L +C K+ +
Sbjct: 656 LQKGISPNISSFRILIKAFCKACD---------------FKASHEVFEIALNVCGHKEAL 700
Query: 458 KVLNF--LLT--------HMFKN--DVSMDAGT--YASLVRGLIESGKLELACSFFEEMI 503
L F LL +F+ D S D G Y L+ L + KLE A +I
Sbjct: 701 YTLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLI 760
Query: 504 SKG 506
KG
Sbjct: 761 DKG 763
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 132/266 (49%), Gaps = 4/266 (1%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
S ++N+L+ + +V+ K+M SP+ ++ I C +
Sbjct: 111 SIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELF 170
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+M +GC+P+ T+ I++ +A ++ L++ +M++ LP+ Y++LI K
Sbjct: 171 DKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCKE 230
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED----LCKPD 440
G+ DA ++ + M++ G+VP+V T+N+ IS+ C + A ++ + M+ D L P+
Sbjct: 231 GKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHPN 290
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY +L C++ ++ L+ M +N ++ +Y + GLI +GKL A +
Sbjct: 291 VITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLK 350
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRL 526
EM+ GI P +Y ++ + L K +
Sbjct: 351 EMLGIGIEPDIYSYNIVMDGLCKNGM 376
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 156/348 (44%), Gaps = 8/348 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +++ +R R + ++ M V + ++L+ L +E A ++F
Sbjct: 111 SIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDARELF 170
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ + C P + F IL+ G+C+ + + +M G P+ V Y I +C+
Sbjct: 171 DKMPARGCEP-NEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL----P 369
E + + +M+E G P V T+ + AL + +I EA +++ M+ D+ L P
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ Y ++ K G +++A + + MK+ N+ +YN + + A +L
Sbjct: 290 NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVL 349
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
++M +PD +Y ++ C+ + L+ M +N + D TY++L+ G
Sbjct: 350 KEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSK 409
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
GK+ A + EMIS P T +L L K+ R+ A+ + K+
Sbjct: 410 GKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKM 457
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/342 (23%), Positives = 152/342 (44%), Gaps = 28/342 (8%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+T++ + G+ DA + M++ G+ + + L + A ++F + +
Sbjct: 221 NTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQI 280
Query: 261 ----CIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+P + I + +++ G+CK +++A+ + M + ++ SY ++ R
Sbjct: 281 DEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNG 340
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ LKEM G +P + +Y IVM L K +++A + M + LPDT YS
Sbjct: 341 KLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYS 400
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+L+ G+V +AN + +M PN T N ++ S A LLQKM E
Sbjct: 401 TLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEK 460
Query: 436 LCKPDCETYAPLLKMCCRK----KRMKVLNFLLTH--------------MFKNDVSM--- 474
D T ++ C K ++++N + TH + + +S
Sbjct: 461 GYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKC 520
Query: 475 --DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
D TY++++ GL ++G+L+ A F EM+SKG+ P + Y
Sbjct: 521 TPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIY 562
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 116/254 (45%), Gaps = 4/254 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF- 255
L T STI+ L + GR DDA + F M G++ D+ + + + + A++V
Sbjct: 524 LVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLK 583
Query: 256 -LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+E + C + Q +N LI G ++ + + EM ++G SPDV +Y + C
Sbjct: 584 DMEKRGCNK-TLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEG 642
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
L EM +KG P++ ++ I++ A KA + +V+E + + C + Y
Sbjct: 643 GRINDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFE-IALNVCGHKEALY 701
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ + L G+V +A E+FE + Y +I C + E A +L ++ +
Sbjct: 702 TLMFNELLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLID 761
Query: 435 DLCKPDCETYAPLL 448
+ D ++ P++
Sbjct: 762 KGYQFDPASFMPVI 775
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 92/211 (43%), Gaps = 9/211 (4%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G T + YN+++ LG + ++ L+ EM E + T + ++ L GGR +D
Sbjct: 589 GCNKTLQTYNSLILGLGSKNQIFELYGLIDEMRE-KGVSPDVCTYNHMLNCLCEGGRIND 647
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCI---PLSSQIFNI 271
A M + G+ + + +L+ K + +++VF + C L + +FN
Sbjct: 648 APSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNVCGHKEALYTLMFNE 707
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+ G KV +A++ + + F Y I+ C+++ D L + +KG
Sbjct: 708 LLVG----GKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKG 763
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+ ++ V+ GK + A ++ E+M
Sbjct: 764 YQFDPASFMPVIDGFGKMGNKHVADELAERM 794
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 189/405 (46%), Gaps = 30/405 (7%)
Query: 145 FGFFTW--AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE-------LVKEMDELNNGYV 195
F FFTW + + + HT Y TM+ L + ++WE +V + + V
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQ---MLWEAKSLIQVVVSRKGKGSASAV 57
Query: 196 SLATMST-------------IMRRLVRGGRYDDAVEAFRGMK--KYGVEKDTRALSVLMD 240
A + T ++ + G DA+E +R + K+ V DT +++
Sbjct: 58 FAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDT--CRKVLE 115
Query: 241 TLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L+K + + + E +C P S FNIL+H +CK + AQ + + G P
Sbjct: 116 HLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRP 175
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
VVSY + Y R D + M G +P V TY+++++ L K ++++A +++
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
++M +P+ +++LI K GRV A EI++ M Q ++P+++TYNT+I C +
Sbjct: 236 DEMLVKGLVPNGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 295
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ + L+ +M KPD TY L+ CC++ + M + ++ +D Y
Sbjct: 296 GDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAY 355
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+L+ GL + G+ A EM++ G+ P TY M+ + KK
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKK 400
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 130/255 (50%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K + ++ A ++F
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K +P + IF LI G CK +VD A + K+M Q PD+++Y I C+
Sbjct: 236 DEMLVKGLVP-NGVIFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK 294
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++V + EM KG KP ITYT ++ K ++ A + ++M ++ D
Sbjct: 295 KGDLKQVHHLIDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVA 354
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P+ TY +I+ C + + KLL++M+
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 434 EDLCKPDCETYAPLL 448
D P TY L+
Sbjct: 415 RDGHVPSVVTYNVLM 429
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 151/348 (43%), Gaps = 37/348 (10%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W KE+ L GY SL + +M R + G A F + K+G+
Sbjct: 117 LMKLKYFKLVWGFYKEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLR 174
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ +N L++G+ + +D+ +
Sbjct: 175 PSVVS----------------------------------YNTLMNGYIRLGDLDEGFRLK 200
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
M G PDV +Y+ I C+E ++ EM KG P+ + +T ++ K
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVIFTTLIDGHCKN 260
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+++ A+++Y++M S LPD Y++LI+ L K G +K + + ++M +G+ P+ +TY
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKITY 320
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
T+I C + + A + ++M ++ + D Y L+ C++ R +L M
Sbjct: 321 TTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLN 380
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ DA TY ++ + G + +EM G VP TY +L
Sbjct: 381 VGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 173/365 (47%), Gaps = 4/365 (1%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
+G + + Y ++++ + K +EL+ EM + N +S T T+++ + G D
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYGTVVKGMCSSGDLD 434
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NIL 272
A + M G + + L+ T ++ + A +V E K+ ++ IF N L
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSL 493
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I G K +++D+A+ + EM + G P+ +Y FI Y +F D +KEM+E G
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P+ + T +++ K +++ EA Y M L D Y+ L+ L K +V DA E
Sbjct: 554 LPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
IF +M+ +G+ P+V +Y +I+ + A + +M E+ P+ Y LL C
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
R ++ LL M + +A TY +++ G +SG L A F+EM KG+VP
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 513 TYKML 517
Y L
Sbjct: 734 VYTTL 738
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 148/308 (48%), Gaps = 6/308 (1%)
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILI 273
+A A+R M G+ D + +VLM+ L K + V+ A ++F E + I + +LI
Sbjct: 575 EACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLI 634
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+G+ K + A EM ++G +P+V+ Y + +CR + K + L EM KG
Sbjct: 635 NGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLH 694
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ +TY ++ K+ + EA +++++MK +PD+ Y++L+ + V+ A I
Sbjct: 695 PNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED----LCKPDCETYAPLLK 449
F K+G + +N +I+ + E ++L ++ + KP+ TY ++
Sbjct: 755 F-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMID 813
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C++ ++ L M ++ TY SL+ G + G+ F+E I+ GI P
Sbjct: 814 YLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEP 873
Query: 510 YHSTYKML 517
H Y ++
Sbjct: 874 DHIMYSVI 881
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 150/335 (44%), Gaps = 2/335 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++ L + R +DA M GV D S+L+D L+KG + + A + E
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
I + +++ I K ++ A+ M G P +Y IE YCREK+
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
R+ + L EM+++ S TY V+ + + ++ A + ++M + C P+ Y++L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + R DA + ++MK+QG+ P++ YN++I + A L +M E+
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KP+ TY + + + M + V + L+ + K+ ACS
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACS 578
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKE 531
+ M+ +GI+ TY +L L K ++ +A+E
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 151/341 (44%), Gaps = 24/341 (7%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L+ ++ L+R R D + ++GM + V D + +L+ + +V+ V
Sbjct: 186 LSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLF 245
Query: 257 ----EF-------------------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
EF K +PL +++LI G CK ++++DA+ + EM
Sbjct: 246 KTEKEFRTATLNVDGALKLKESMICKGLVPLK-YTYDVLIDGLCKIKRLEDAKSLLVEMD 304
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
G S D +Y+ I+ + ++ + EM G Y + + K +
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
+A +++ M + +P Y+SLI + V+ E+ +MKK+ +V + TY T++
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C+ + + A ++++M C+P+ Y L+K + R +L M + ++
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
D Y SL+ GL ++ +++ A SF EM+ G+ P TY
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 142/344 (41%), Gaps = 35/344 (10%)
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVF-----LEFKDCIPLSSQIFNILIHGWCKTRK 281
G D +L D + +E A VF LE +P S+ +L+ + +
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLEL---VPRLSRC-KVLLDALLRWNR 201
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR--------------EKDFR----KVDDT 323
+D K M ++ DV +Y I +CR EK+FR VD
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGA 261
Query: 324 LK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
LK M KG P TY +++ L K K++ +A + +M S D YS LI
Sbjct: 262 LKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDG 321
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K A + +M G+ Y+ I E A L M P
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ 381
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
+ YA L++ CR+K ++ LL M K ++ + TY ++V+G+ SG L+ A + +
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 501 EMISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
EMI+ G P Y +++ L+ R G+A ++L KEQ
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAM----RVLKEMKEQ 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 12/311 (3%)
Query: 160 TPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP +YN ++ +S + EL+ EM + + + T TI+ + G +A
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
F MK G+ D+ + L+D + N VE A +F K S+ FN LI+
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVF 777
Query: 278 KTRKVDDAQKAMKEMFQQGFS----PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
K K + + + + F P+ V+Y I++ C+E + + +MQ
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+VITYT +++ K + E V+++ + PD YS +I K G A +
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Query: 394 FEDMKKQGVVPN-----VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+ M + V + + T ++S E E A K+++ M PD T L+
Sbjct: 898 VDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Query: 449 KMCCRKKRMKV 459
C +V
Sbjct: 958 NESCISSNQRV 968
>gi|11079485|gb|AAG29197.1|AC078898_7 hypothetical protein [Arabidopsis thaliana]
Length = 441
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 152/289 (52%), Gaps = 7/289 (2%)
Query: 238 LMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L+ +L + VE +++ E +D + FN L++G+CK V +A++ + + Q G
Sbjct: 126 LLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLIQAG 185
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
PD +YT FI +CR K+ KEM + GC + ++YT +++ L +AK+I+EAL
Sbjct: 186 CDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKIDEAL 245
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ KMK D+C P+ Y+ LI L +G+ +A +F+ M + G+ P+ Y +I S
Sbjct: 246 SLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLIQSF 305
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
C+ + A LL+ M E+ P+ TY L+K C+K K + LL+ M + ++ D
Sbjct: 306 CSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMG-LLSKMLEQNLVPDL 364
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
TY +L+ G SG S E++ + + Y+ K E EKKR
Sbjct: 365 ITYNTLIAGQCSSG-----ISLSEKICNGLLRCYYKLQKYEEAAKEKKR 408
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/298 (22%), Positives = 125/298 (41%), Gaps = 47/298 (15%)
Query: 241 TLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
T+ KG+S E YK L+ + +N L+ + V++ ++ EM + SPD
Sbjct: 105 TMRKGDSFEIKYK----------LTPKCYNNLLSSLARFGLVEEMKRLYTEMLEDLVSPD 154
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+ ++ + YC+ + + + + GC P TYT + + K++
Sbjct: 155 IYTFNTLVNGYCKLGYVVEAKQYVTWLIQAGCDPDYFTYTSFITGHCRRKEV-------- 206
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
D +F ++F++M + G N ++Y +I
Sbjct: 207 ---------DAAF------------------KVFKEMTQNGCHRNEVSYTQLIYGLFEAK 239
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLL-KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ + AL LL KM++D C P+ TY L+ +C ++ + +N L M ++ + D Y
Sbjct: 240 KIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMN-LFKQMSESGIKPDDCMY 298
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
L++ L+ A E M+ G++P TY L + KK + A ++K+L
Sbjct: 299 TVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCKKNVHKAMGLLSKML 356
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 93/205 (45%), Gaps = 3/205 (1%)
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ +L + + E ++Y +M D PD +++L+ K G V +A + +
Sbjct: 123 YNNLLSSLARFGLVEEMKRLYTEMLEDLVSPDIYTFNTLVNGYCKLGYVVEAKQYVTWLI 182
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ G P+ TY + I+ C R E + A K+ ++M ++ C + +Y L+ K++
Sbjct: 183 QAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQNGCHRNEVSYTQLIYGLFEAKKID 242
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
LL M ++ + TY L+ L SG+ A + F++M GI P Y +L
Sbjct: 243 EALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPDDCMYTVLI 302
Query: 519 EKLEKKRLGNAKERINKLLAHAKEQ 543
+ G+ + + LL H E
Sbjct: 303 QSFCS---GDTLDEASGLLEHMLEN 324
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 97/217 (44%), Gaps = 9/217 (4%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
+ TW Q G Y + + + K+ +++ KEM + N + + + + ++
Sbjct: 177 YVTWL-IQAGCDPDYFTYTSFITGHCRRKEVDAAFKVFKEMTQ-NGCHRNEVSYTQLIYG 234
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLS 265
L + D+A+ MK + R +VL+D L A +F + + I
Sbjct: 235 LFEAKKIDEALSLLVKMKDDNCCPNVRTYTVLIDALCGSGQKSEAMNLFKQMSESGIKPD 294
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
++ +LI +C +D+A ++ M + G P+V++Y I+ +C+ K+ K L
Sbjct: 295 DCMYTVLIQSFCSGDTLDEASGLLEHMLENGLMPNVITYNALIKGFCK-KNVHKAMGLLS 353
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+M E+ P +ITY ++ A Q + + + EK+
Sbjct: 354 KMLEQNLVPDLITYNTLI-----AGQCSSGISLSEKI 385
>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 506
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 169/362 (46%), Gaps = 4/362 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ + D L ++ M L + L NG + T S ++ L + G+ A E +
Sbjct: 123 YSILFDGLSRNGDSKAMLSLFGKY--LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQS 180
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
+ G+ + L++ + +E A+ F + K I +N LI+G CK +
Sbjct: 181 LVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAER 240
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +AQ + EM G +P V ++ I+ Y R K L EMQE G KP+V++Y
Sbjct: 241 ITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGS 300
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++A K +I EA+ + + M D LP+ Y+++I + G A + E MK G
Sbjct: 301 IVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNG 360
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P+++TYN +I C +S+ A +++ + PD +Y L+ CC + +
Sbjct: 361 ISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKAL 420
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M K + TY L+ GL +G+L +++M+ +VP ++ + ++ E
Sbjct: 421 DLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAY 480
Query: 522 EK 523
K
Sbjct: 481 SK 482
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 153/319 (47%), Gaps = 3/319 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ + R GR DAVE F M + V + + ++D +KG +E +++ +
Sbjct: 19 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV- 77
Query: 261 CIPL--SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
C L ++ +N+L+ G C+ ++ + + EM Q PD +Y+ + R D +
Sbjct: 78 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 137
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + + G T +I+++ L K +++ A +V + + + +P Y++LI
Sbjct: 138 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 197
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
+ G ++ A F MK + + P+ +TYN +I+ C NA LL +M+++
Sbjct: 198 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 257
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P ET+ L+ R +++ +L+ M +N + + +Y S+V ++GK+ A +
Sbjct: 258 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 317
Query: 499 FEEMISKGIVPYHSTYKML 517
++M K ++P Y +
Sbjct: 318 LDDMFHKDVLPNAQVYNAI 336
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 89/379 (23%), Positives = 165/379 (43%), Gaps = 40/379 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRG 222
YNTM+D K + L +M + +G A T + ++ L R GR +
Sbjct: 53 YNTMIDGHIKGGDLEAGFRLRDQM--VCHGLKPNAITYNVLLSGLCRAGRMGETSALLDE 110
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M + D S+L D L + + +F ++ K+ + + +IL++G CK K
Sbjct: 111 MASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGK 170
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V A++ ++ + G P V Y I YC+ + T +M+ + KP ITY
Sbjct: 171 VSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNA 230
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ L KA++I A + +M+ + P +++LI + G+++ + +M++ G
Sbjct: 231 LINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENG 290
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PNV++Y +++++ C + A+ +L
Sbjct: 291 LKPNVVSYGSIVNAFCKNGKIPEAVAILDD------------------------------ 320
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
MF DV +A Y +++ +E G + A E+M S GI P TY +L + L
Sbjct: 321 -----MFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 375
Query: 522 -EKKRLGNAKERINKLLAH 539
+ ++ A+E IN L H
Sbjct: 376 CNQSQISEAEEIINSLSNH 394
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 121/287 (42%), Gaps = 35/287 (12%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P ++ +N++I G + + DA + EM ++ P+ ++Y I+ + + D
Sbjct: 12 PPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFR 71
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+M G KP+ ITY +++ L +A ++ E + ++M S +PD YS L LS
Sbjct: 72 LRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 131
Query: 383 -----------------------------------KAGRVKDANEIFEDMKKQGVVPNVL 407
K G+V A E+ + + G+VP +
Sbjct: 132 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 191
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
YNT+I+ C E E A +M+ KPD TY L+ C+ +R+ LL M
Sbjct: 192 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 251
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
N V+ T+ +L+ +G+LE EM G+ P +Y
Sbjct: 252 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSY 298
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 120/248 (48%), Gaps = 8/248 (3%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G T E +NT++D G++ + + ++ EM E N ++ + +I+ + G+
Sbjct: 254 NGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQE-NGLKPNVVSYGSIVNAFCKNGKIP 312
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILI 273
+AV M V + + + ++D V+ + A+ + + K + I S +N+LI
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G C ++ +A++ + + PD VSY I C + K D + M + G K
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIK 432
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
+V TY ++ LG A ++NE +Y+KM ++ +P + ++ ++ SK G NEI
Sbjct: 433 STVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG-----NEI 487
Query: 394 -FEDMKKQ 400
ED++K+
Sbjct: 488 KAEDLRKE 495
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 1/148 (0%)
Query: 361 KMKSDDCLPDTSF-YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+M D P +F Y+ +I + +AGR DA E+F++M ++ V+PN +TYNTMI
Sbjct: 4 RMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKG 63
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ E +L +M KP+ TY LL CR RM + LL M + D TY
Sbjct: 64 GDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTY 123
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGI 507
+ L GL +G + S F + + G+
Sbjct: 124 SILFDGLSRNGDSKAMLSLFGKYLKNGV 151
>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
Length = 807
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 125/488 (25%), Positives = 221/488 (45%), Gaps = 49/488 (10%)
Query: 85 SSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPA 144
S+R L+ DV ++ +I+ +S ++ ++K G +S LV L N A
Sbjct: 20 SNRALTLEERRDVRQLLQIV----ESSSRLGFSMKWNG-QLSQRLVGVILHMVKNG-ESA 73
Query: 145 FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM--DEL------------ 190
FF WA T+ + HT YN + L ++ + + L KE EL
Sbjct: 74 MVFFGWAGTRQDFRHTVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIR 133
Query: 191 ---NNGYVSLA-----------------TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
N G + LA T ++ L + G + A+ F M
Sbjct: 134 GLCNFGKLKLACSLYEEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAA 193
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
++L+D L + V+ A F E K ++ + ++I+G K KV +A++ ++
Sbjct: 194 ---TWTILIDGLFRAIRVDEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQ 250
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
EM P + +YT I +C+ D K L++M+ KG + +TY ++H + +
Sbjct: 251 EM----PVPTLANYTSVIGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQ 306
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ-GVVPNVLTY 409
+I+ A ++ E+MKS+D +PD Y LI L +A R+ +A ++ ++ + PNV++Y
Sbjct: 307 EIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSY 366
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
NT+I + +A +L +M PD TY+ L++ C R + L M
Sbjct: 367 NTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVG 426
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGN 528
+ Y+S++ GL +G+L+ A + F+ M++ G P + Y L L K RL +
Sbjct: 427 KKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCD 486
Query: 529 AKERINKL 536
AK R+ ++
Sbjct: 487 AKLRVKEM 494
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 98/377 (25%), Positives = 163/377 (43%), Gaps = 37/377 (9%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ R D A E MK D +L+ L + + A +
Sbjct: 294 TYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARDLLGTL 353
Query: 259 K---DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ DC P + +N LI G+ K +V+DA + EM G PDVV+Y+ I C
Sbjct: 354 RNEDDCTP-NVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGLCNAG 412
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ L+EM K P V Y+ V+ L +A +++ A V++ M ++ C P+ + Y+
Sbjct: 413 RASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNLAVYN 472
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC--ARSEE----------- 422
SLI+ L K GR+ DA ++M ++G P+ +TY T+I C +R++E
Sbjct: 473 SLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQ 532
Query: 423 -------------------ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
E A ++L+ + P YA +++ C++ + L
Sbjct: 533 GIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAEARQL 592
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
L M + D T +LV + K +A +F EEM+ G P TY L L K
Sbjct: 593 LEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFK 652
Query: 524 K-RLGNAKERINKLLAH 539
+ A + +L++H
Sbjct: 653 AGKPSEAHVVLRRLISH 669
Score = 108 bits (271), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 166/367 (45%), Gaps = 14/367 (3%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP + YNT++D K+ + ++L EM + + T ST++R L GR +A
Sbjct: 360 TPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQ-HPDVVTYSTLIRGLCNAGRASEAH 418
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHG 275
M + S ++ L + ++ A VF + C P + ++N LI+G
Sbjct: 419 SYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQP-NLAVYNSLIYG 477
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
CKT ++ DA+ +KEM ++G SPD V+Y I CR + D E+G + S
Sbjct: 478 LCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVRSLEQGIEIS 537
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ +V+ +L +Q L+V + P FY+++I L K + +A ++ E
Sbjct: 538 ETSCNVVIASLRCLEQAQRVLRVVLATGNS---PTAFFYATVIESLCKENNLAEARQLLE 594
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
DM G+ P+ T + ++ + C + + A+ L++M KP TY+ LL +
Sbjct: 595 DMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLNALFKAG 654
Query: 456 RMKVLNFLLTHMFKNDVSM-DAGTYASLVRGLIESGKLELACSFFEEMISK----GIVPY 510
+ + +L + + D Y L+ ++E A + +E+ SK IV Y
Sbjct: 655 KPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGIQSIVAY 714
Query: 511 HSTYKML 517
++ K L
Sbjct: 715 NTLLKGL 721
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/330 (23%), Positives = 149/330 (45%), Gaps = 6/330 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+LA ++++ L + GR DA + M + G D L+ L + + + A ++
Sbjct: 467 NLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLY 526
Query: 256 LE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ + I +S N++I R ++ AQ+ ++ + G SP Y IE C+E
Sbjct: 527 VRSLEQGIEISETSCNVVI---ASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKE 583
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + L++M G KP T ++ A+ + + A+ E+M P Y
Sbjct: 584 NNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTY 643
Query: 375 SSLIFILSKAGRVKDANEIFEDM-KKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
S+L+ L KAG+ +A+ + + P+ L Y +I++ + + E A +LQ+++
Sbjct: 644 STLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELK 703
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
Y LLK R + ++++ LL M +N+ ++ T+ L++G G+ +
Sbjct: 704 SKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTD 763
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
A EM K + P + K L ++L +
Sbjct: 764 RAVRVLSEM-KKVLTPSAAIIKFLVDELAR 792
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 154/320 (48%), Gaps = 4/320 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
+T++ V GR DDA M YG+ D + L+ K V A +V + +
Sbjct: 351 NTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMR 410
Query: 260 D--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ C P + + IL+ G+CK K+D+A + EM G P+ V + C I +C+E
Sbjct: 411 NKGCKP-NVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + +EM KGCKP V T+ ++ L + +I AL + M S+ + +T Y++L
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + G +K+A ++ +M QG + + +TYN++I C E + A L +KM D
Sbjct: 530 INAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGL 589
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
P + L+ CR ++ M + D T+ SL+ GL +G++E +
Sbjct: 590 VPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLT 649
Query: 498 FFEEMISKGIVPYHSTYKML 517
F ++ ++GI P TY L
Sbjct: 650 MFRKLQAEGIPPDTVTYNTL 669
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 107/468 (22%), Positives = 196/468 (41%), Gaps = 71/468 (15%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD----------- 188
D++ + F+W +Q GY H+ ++Y ++ LG + +F + L+ +M
Sbjct: 84 DVSTSMELFSWTGSQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIVFKESLF 143
Query: 189 ---------------------ELNNGYV---SLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
E+ N Y + + + ++ LV G + A F M
Sbjct: 144 ISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDML 203
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRKV 282
+ V+M L N V+ A V + C+P +S I+ LIH K +V
Sbjct: 204 SRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVP-NSVIYQTLIHSLSKCNRV 262
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
++A + ++EMF G PD ++ I C+ + + M +G P ITY +
Sbjct: 263 NEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYL 322
Query: 343 MHALGKAKQINEALKVYEKM-------------------KSDDC-------------LPD 370
M+ L K +++ A ++ ++ + DD +PD
Sbjct: 323 MNGLCKIGRVDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPD 382
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y+SLI+ K G V A E+ DM+ +G PNV +Y ++ C + + A LL
Sbjct: 383 VCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLN 442
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
+M D KP+ + L+ C++ R+ + M + D T+ SL+ GL E
Sbjct: 443 EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVD 502
Query: 491 KLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKLL 537
+++ A +MIS+G+V TY ++ L + + A++ +N+++
Sbjct: 503 EIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 550
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 4/148 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN+++ L ++ + L ++M L +G V S + + ++ L R G ++AVE +
Sbjct: 561 YNSLIKGLCRAGEVDKARSLFEKM--LRDGLVPSSISCNILINGLCRSGMVEEAVEFQKE 618
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRK 281
M G D + L++ L + +E +F + + + IP + +N L+ CK
Sbjct: 619 MVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGF 678
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
V DA + E + GF P+ +++ ++
Sbjct: 679 VYDACLLLDEGIEDGFVPNDRTWSILLQ 706
>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1246
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 153/286 (53%), Gaps = 4/286 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++D GKSK+ +++L EM + T + I+ LV+ + A++ + +
Sbjct: 834 YNLLLDAHGKSKRINKLYDLYSEMRS-RGCEPNAITHNIIISALVKSNNLNKALDLYYEL 892
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
L+D L+K E A K+F E D C P +S I+NILI+G+ K+ +
Sbjct: 893 MSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGP-NSVIYNILINGFGKSGE 951
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A + K+M ++G PD+ SYT +E C + +E++ G P ++Y
Sbjct: 952 IDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNF 1011
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ LGK+++++EAL ++ +MK+ PD Y++LI L AG+V A +++E+++ G
Sbjct: 1012 IINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVG 1071
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+ P+V TYN +I ++ A + +KM C P+ ET+A L
Sbjct: 1072 LEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQL 1117
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 184/396 (46%), Gaps = 41/396 (10%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWEL 183
SVS V L+ S D AF +F T ++HT + N M+++L + ++ + ++
Sbjct: 95 SVSEEEVMTILKSIS-DPNSAFSYFKIVSQLTNFVHTTDACNYMLEILREQRR---IEDM 150
Query: 184 VKEMDELNNG--YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
V D + Y +L T TI + L G A A R M + G
Sbjct: 151 VFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVGF------------- 197
Query: 242 LVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
+ +AY + + ++L+ G+C ++A K K M +G P +
Sbjct: 198 ------ILNAYSY-----------NGLIHLLLPGFC-----NEALKVYKRMISEGMKPSM 235
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
+Y+ + R D RK+ + L+EM+ G +P++ TYTI + ALG+A++I++A ++++
Sbjct: 236 KTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKE 295
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M + C PD Y+ LI L AG++ A E++ M+ P+ +TY T++ +
Sbjct: 296 MDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGD 355
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
E + +ME D PD TY L++ C+ + +L M + + TY +
Sbjct: 356 LETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNT 415
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ GL+++ +L+ A E M S G+ P +Y +
Sbjct: 416 MICGLLKARRLDEALELLENMESLGVKPTAFSYVLF 451
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 173/411 (42%), Gaps = 74/411 (18%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y + LG++++ W + KEMD+ G + T + ++ L G+ D A E + M
Sbjct: 273 YTICIRALGRARRIDDAWGIFKEMDDEGCG-PDVITYTVLIDALCAAGKLDKAKELYVKM 331
Query: 224 KKY-----------------------------------GVEKDTRALSVLMDTLVKGNSV 248
+ G D ++L++ L K V
Sbjct: 332 RASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDV 391
Query: 249 EHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
+ A+ + + K P + +N +I G K R++D+A + ++ M G P SY
Sbjct: 392 DRAFDMLDVMTTKGIFP-NLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVL 450
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSV------------------------------ 336
FI++Y + D K DT + M+++G PS+
Sbjct: 451 FIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCG 510
Query: 337 -----ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+TY ++M KA QI++A ++ +M S C PD +SLI L KAGRV A
Sbjct: 511 LSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAW 570
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++F +K + P V+TYN +++ + AL+L M E C P+ T+ LL
Sbjct: 571 KMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCL 630
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
+ + + + M + + D TY +++ GLI G+++ A FF +M
Sbjct: 631 SKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM 681
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 146/292 (50%), Gaps = 2/292 (0%)
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDA 285
V +D + L+ L K A VF +F + + + +N L+ G + + A
Sbjct: 756 VCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKA 815
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ ++M G P+ +Y ++ + + K K+ D EM+ +GC+P+ IT+ I++ A
Sbjct: 816 LELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISA 875
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
L K+ +N+AL +Y ++ S D P Y LI L KAGR + A +IFE+M G PN
Sbjct: 876 LVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPN 935
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
+ YN +I+ E + A +L +KM ++ +PD ++Y L++ C R+
Sbjct: 936 SVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFE 995
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + D +Y ++ GL +S +L+ A S F EM ++GI P TY L
Sbjct: 996 ELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNAL 1047
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 95/367 (25%), Positives = 170/367 (46%), Gaps = 4/367 (1%)
Query: 161 PEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
P M Y+ ++ LG+ + L++EM + ++ T + +R L R R DDA
Sbjct: 233 PSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGL-RPNIYTYTICIRALGRARRIDDAWG 291
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI-LIHGWC 277
F+ M G D +VL+D L ++ A +++++ + ++ I L+ +
Sbjct: 292 IFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFG 351
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K ++ ++ EM G++PDVV+YT IE C+ D + D L M KG P++
Sbjct: 352 KVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLH 411
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++ L KA++++EAL++ E M+S P Y I K+G A + FE M
Sbjct: 412 TYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETM 471
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
KK+G++P++ N + + A + + + PD TY L+K + ++
Sbjct: 472 KKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQI 531
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL+ M D SL+ L ++G+++ A F + + + P TY +L
Sbjct: 532 DKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNIL 591
Query: 518 EEKLEKK 524
L K+
Sbjct: 592 LTGLGKE 598
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 222/477 (46%), Gaps = 21/477 (4%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEAL 118
SPD + + ++ ++++ +++ S ++S+ E DV I+ +++ Y++ +V A
Sbjct: 512 SPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKA-GRVDAAW 570
Query: 119 KGCGVSVSNSLVEQTLRRFSNDLTP---------AFGFFTWAKTQTGYMHTPEMYNTMVD 169
K G + N + T+ ++ LT A F + T++G +N+++D
Sbjct: 571 KMFG-RLKNLKLAPTVVTYNILLTGLGKEGKILKALELFG-SMTESGCPPNTITFNSLLD 628
Query: 170 VLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K+ L ++ M +N + T +TI+ L+R GR D A F MKK+ +
Sbjct: 629 CLSKNDAVDLALKMFCRMTMMNCN-PDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LS 686
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
D L L+ +V+ VE A KV +EF + C+ +SQ + L+ ++++A
Sbjct: 687 PDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAIS 746
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREK---DFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
+ + D I+ C+ K D + V D K + G P++ +Y +M
Sbjct: 747 FAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFD--KFTKNLGIHPTLESYNCLMD 804
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
L + +AL+++E MKS P+ Y+ L+ K+ R+ +++ +M+ +G P
Sbjct: 805 GLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEP 864
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
N +T+N +IS+ + AL L ++ P TY PL+ + R + +
Sbjct: 865 NAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIF 924
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
M ++ Y L+ G +SG+++ AC F++M+ +GI P +Y +L E L
Sbjct: 925 EEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECL 981
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 153/321 (47%), Gaps = 2/321 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAF-RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
M +++ L + + DA F + K G+ + + LMD L+ N E A ++F +
Sbjct: 762 VMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFED 821
Query: 258 FKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K + +N+L+ K+++++ EM +G P+ +++ I + +
Sbjct: 822 MKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNN 881
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
K D E+ P+ TY ++ L KA + +A+K++E+M C P++ Y+
Sbjct: 882 LNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNI 941
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI K+G + A E+F+ M K+G+ P++ +Y ++ C + A++ ++++
Sbjct: 942 LINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTG 1001
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PD +Y ++ + +R+ L + M +S D TY +L+ L +GK+++A
Sbjct: 1002 LDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAV 1061
Query: 497 SFFEEMISKGIVPYHSTYKML 517
+EE+ G+ P TY L
Sbjct: 1062 KMYEELQLVGLEPSVFTYNAL 1082
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 126/260 (48%), Gaps = 10/260 (3%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIE----HYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ A A+++M + GF + SY I +C E KV K M +G KPS+
Sbjct: 182 IGRAPFALRKMTEVGFILNAYSYNGLIHLLLPGFCNEA--LKV---YKRMISEGMKPSMK 236
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY+ +M ALG+ + + + E+MKS P+ Y+ I L +A R+ DA IF++M
Sbjct: 237 TYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEM 296
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+G P+V+TY +I + CA + + A +L KM PD TY L+ + +
Sbjct: 297 DDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDL 356
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-M 516
+ + M + + D TY L+ L +SG ++ A + M +KGI P TY M
Sbjct: 357 ETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTM 416
Query: 517 LEEKLEKKRLGNAKERINKL 536
+ L+ +RL A E + +
Sbjct: 417 ICGLLKARRLDEALELLENM 436
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/376 (23%), Positives = 169/376 (44%), Gaps = 45/376 (11%)
Query: 156 GYMHTPEMYNTMVD-VLGK--SKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
G T E YN ++D +LG ++K ++E +K N + T + ++ + R
Sbjct: 791 GIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNF----TYNLLLDAHGKSKR 846
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFN 270
+ + + M+ G E + ++++ LVK N++ A ++ E D P + +
Sbjct: 847 INKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSP-TPCTYG 905
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI G K + + A K +EM G P+ V Y I + + + + K+M ++
Sbjct: 906 PLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKE 965
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G +P + +YTI++ L +I+EA++ +E++K PDT Y+ +I L K+ R+ +A
Sbjct: 966 GIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEA 1025
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+F +MK +G+ P++ TYN +I + + A+K+ ++++ +P
Sbjct: 1026 LSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEP----------- 1074
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
TY +L+RG SG + A S F++M+ G P
Sbjct: 1075 ------------------------SVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPN 1110
Query: 511 HSTYKMLEEKLEKKRL 526
T+ L K + L
Sbjct: 1111 TETFAQLPNKYPRAGL 1126
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/276 (25%), Positives = 135/276 (48%), Gaps = 11/276 (3%)
Query: 119 KGCGV-SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKF 177
+GC +++++++ L + SN+L A + + + TP Y ++D L K+ +
Sbjct: 860 RGCEPNAITHNIIISALVK-SNNLNKALDLY-YELMSGDFSPTPCTYGPLIDGLLKAGRS 917
Query: 178 CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSV 237
++ +EM + G S+ + ++ + G D A E F+ M K G+ D ++ ++
Sbjct: 918 EQAMKIFEEMLDYGCGPNSV-IYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTI 976
Query: 238 LMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG 296
L++ L ++ A + F E K + + +N +I+G K+R++D+A EM +G
Sbjct: 977 LVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRG 1036
Query: 297 FSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQIN 353
SPD+ +Y I H KVD +K E+Q G +PSV TY ++ + +
Sbjct: 1037 ISPDLYTYNALILHLGIAG---KVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKD 1093
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+A V++KM C P+T ++ L +AG V +
Sbjct: 1094 QAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHN 1129
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 90/322 (27%), Positives = 160/322 (49%), Gaps = 1/322 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L S +M + G DA++ FR KK+ + +++ L+K + +
Sbjct: 66 LYVFSGLMLAYLESGFVRDAIQCFRLTKKHKIWVPFDTCRKVLEHLMKLRYFRLVWGFYK 125
Query: 257 EFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E +C P S FNIL+H +CK ++ AQ + + P VVS+ + Y R
Sbjct: 126 EILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLG 185
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
D + M G +P V TY+++++ L K +++EA ++ +M + +P+ ++
Sbjct: 186 DLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGVTFT 245
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI K G+V A EI++ M QG +P+++TYNT+I C R + A L+++M
Sbjct: 246 TLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMK 305
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
KPD TY L+ C++ +++ L M + ++ +D TY +L+ GL G+ A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDA 365
Query: 496 CSFFEEMISKGIVPYHSTYKML 517
EM++ G+ P + TY M+
Sbjct: 366 EKMLREMLTVGLKPDNGTYTMI 387
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 3/250 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K + ++ A ++
Sbjct: 170 SVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEML 229
Query: 256 LEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E D +P + F LI G CK KVD A + K+M QGF PD+++Y I CR
Sbjct: 230 NEMLDNGLVP-NGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCR 288
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D + D ++EM KG KP ITYT ++ K + ++ ++M ++ D
Sbjct: 289 RGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVT 348
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P+ TY +++ C + + A KLL++M+
Sbjct: 349 YTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTASKLLREMQ 408
Query: 434 EDLCKPDCET 443
+ P T
Sbjct: 409 RNGPVPGVVT 418
>gi|224125420|ref|XP_002329801.1| predicted protein [Populus trichocarpa]
gi|222870863|gb|EEF07994.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 116/436 (26%), Positives = 194/436 (44%), Gaps = 48/436 (11%)
Query: 125 VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQ--TGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
++ S VEQ LR DL A F A + G+ H + M+ L + +F E
Sbjct: 13 ITPSKVEQLLRA-ERDLRKAKIIFDSASAEYSNGFRHDHTTFGVMISKLVSANEFRPAEE 71
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
++ M E ++ +I R R DA+ F M +G + ++ + L
Sbjct: 72 MLNRMKE-EKCRITEEIFLSICRGYGRVHMPLDAIRVFHKMNDFGCKPTDKSYISVFAIL 130
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCK-TRKVDDAQKAMKEMFQQGFSPD 300
V+ N ++ A + ++ S + N+LI CK + +D A + +EM ++G PD
Sbjct: 131 VEENQLKVAMSFYKYMREMGVRQSVVSLNVLIKALCKNSGTIDAAFEIFREMPKRGCDPD 190
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+Y I C+ + + KEM KGC PSV+TY+ +MH L +A ++EA+ +++
Sbjct: 191 SYTYGTLINGLCKLGKTFEAKELFKEMDTKGCSPSVVTYSCLMHGLCQAGNVDEAMGLFD 250
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
KMK P+ YSSL+ L K G +A E+ E M ++ PN++TY+T+I+ C
Sbjct: 251 KMKKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEG 310
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK---------------------- 458
+ A++ L +M+ KPD Y ++ C ++ +
Sbjct: 311 KLAEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWS 370
Query: 459 --------VLNFLLTH------------MFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
V+ L T+ M +S+DAGT+ SLV+ + G L A
Sbjct: 371 LHVKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARI 430
Query: 499 FEEMISKGIVPYHSTY 514
F+EM+ G VP H +
Sbjct: 431 FDEMVLDGCVPDHGIW 446
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 123/272 (45%), Gaps = 9/272 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+++ L K K EL KEMD S+ T S +M L + G D+A+ F M
Sbjct: 194 YGTLINGLCKLGKTFEAKELFKEMDT-KGCSPSVVTYSCLMHGLCQAGNVDEAMGLFDKM 252
Query: 224 KKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
KK +E + S LMD L K G S+E + + + + ++ LI+G CK K+
Sbjct: 253 KKKAIEPNVFTYSSLMDGLCKNGGSLEAMELLEMMVRKRHKPNMVTYSTLINGLCKEGKL 312
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI- 341
+A + + M QG PD Y I +C + F++ L EM P+ +T+++
Sbjct: 313 AEAVETLDRMKLQGLKPDAGLYGKIINGFCNIRKFQEAATYLDEMVLGQISPNRVTWSLH 372
Query: 342 ------VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+ L +N + ++Y M++ D + SL+ K G + A IF+
Sbjct: 373 VKLNNMVVQGLCTNGNLNRSFQLYIGMRTRGISIDAGTFDSLVKCFCKKGDLHKAARIFD 432
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALK 427
+M G VP+ ++ ++ R + A +
Sbjct: 433 EMVLDGCVPDHGIWSAVVGGFWDRRKVREAFE 464
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 182/381 (47%), Gaps = 13/381 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++D KS EL+K D + G+V T +++ L G + A+E F
Sbjct: 318 YNTIIDGYCKSGMLQEATELLK--DAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNE 375
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
+ ++ D + L+ L + + HA +V E + C P +NI+I+G CK
Sbjct: 376 AQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHP-DIWTYNIIINGLCKMG 434
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ DA M + +G+ PDV ++ I+ YC+ ++ M G P VITY
Sbjct: 435 NISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYN 494
Query: 341 IVMHAL---GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
V++ L GKAK++NE +E+M C P+ Y+ LI K ++++A+ + M
Sbjct: 495 SVLNGLCKAGKAKEVNE---TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRM 551
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ G+VP+ +++NT+I C + + A L QK++E +T+ L+ K M
Sbjct: 552 CQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNM 611
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY-KM 516
++ + M D TY LV GL ++ ++ A + EMISKG VP +T+ +M
Sbjct: 612 QMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRM 671
Query: 517 LEEKLEKKRLGNAKERINKLL 537
L R+ A I+ ++
Sbjct: 672 LNLLAMNHRVSEAVAIIHIMV 692
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 176/382 (46%), Gaps = 12/382 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++ L K K + + M +N G + T +TI+ + G +A E +
Sbjct: 283 YNTLMRGLCKDSKVQEAAQYLGRM--MNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKD 340
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
G D L++ L +E A ++F E KD P ++N L+ G C+
Sbjct: 341 AVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKP-DLVVYNSLVKGLCRQG 399
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ A + M EM ++G PD+ +Y I C+ + + + KG P V T+
Sbjct: 400 LILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFN 459
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K +++ AL++ E+M + PD Y+S++ L KAG+ K+ NE FE+M +
Sbjct: 460 TLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILK 519
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G PN +TYN +I + C ++ E A ++ +M +D PD ++ L+ CR +
Sbjct: 520 GCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGA 579
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L + + S A T+ L+ +++A F EMISKG P TY++L +
Sbjct: 580 YLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDG 639
Query: 521 LEKKRLGNAKERINKLLAHAKE 542
L K +++ AH E
Sbjct: 640 LCK------AANVDRAYAHLAE 655
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 150/315 (47%), Gaps = 3/315 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L +++++ L R G A++ M + G D +++++ L K ++ A V
Sbjct: 385 LVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMN 444
Query: 257 E--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ K +P FN LI G+CK K+D A + ++ M+ G +PDV++Y + C+
Sbjct: 445 DAIVKGYLP-DVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKA 503
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
++V++T +EM KGC+P+ ITY I++ K Q+ EA V +M D +PD +
Sbjct: 504 GKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSF 563
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI + G + A +F+ + ++G T+N +I + ++ + A K+ +M
Sbjct: 564 NTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMIS 623
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
KPD TY L+ C+ + L M T+ ++ L + ++
Sbjct: 624 KGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSE 683
Query: 495 ACSFFEEMISKGIVP 509
A + M+ G+VP
Sbjct: 684 AVAIIHIMVRMGVVP 698
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 146/311 (46%), Gaps = 8/311 (2%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQI 268
GR A+ R + + G + A ++ L +A +F E +D P
Sbjct: 155 GRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFP-DVAT 213
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FN ++H C+ V ++ + ++ ++G S + + +I C + ++++ + ++
Sbjct: 214 FNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDG---RLEEAVALVE 270
Query: 329 EKGC--KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
G P V+TY +M L K ++ EA + +M + C+PD Y+++I K+G
Sbjct: 271 RMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGM 330
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+++A E+ +D +G VP+ +TY ++I+ CA + E AL+L + + KPD Y
Sbjct: 331 LQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNS 390
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+K CR+ + ++ M + D TY ++ GL + G + A + I KG
Sbjct: 391 LVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKG 450
Query: 507 IVPYHSTYKML 517
+P T+ L
Sbjct: 451 YLPDVFTFNTL 461
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 125/261 (47%), Gaps = 4/261 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY+ +NT++D K K +LV+ M + T ++++ L + G+ +
Sbjct: 450 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIA-PDVITYNSVLNGLCKAGKAKE 508
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIH 274
E F M G + ++L++ K N +E A V + +D + + FN LIH
Sbjct: 509 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIH 568
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C+ +D A +++ ++G+S ++ I Y + + + + EM KG KP
Sbjct: 569 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 628
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ TY I++ L KA ++ A +M S +P + + ++ +L+ RV +A I
Sbjct: 629 DLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAII 688
Query: 395 EDMKKQGVVPNVLTYNTMISS 415
M + GVVP V+ +T++S+
Sbjct: 689 HIMVRMGVVPEVV--DTILST 707
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 104/254 (40%), Gaps = 6/254 (2%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS--YTCFIEHYCREKDFRKVDDTLKE 326
+ LI ++DD A+ + +PD + Y I+ Y R R D +
Sbjct: 38 YRALIRELVSAGRLDDVDAALASA-RSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFER 96
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M C P+ Y +M AL A ++A KVY +M + PD ++ + GR
Sbjct: 97 MDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGR 156
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
A + + ++G Y T++ A NA L +M PD T+
Sbjct: 157 PHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNN 216
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM---I 503
+L C+K + LL + K +S + T +RGL E G+LE A + E M +
Sbjct: 217 VLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMGAYV 276
Query: 504 SKGIVPYHSTYKML 517
+ +V Y++ + L
Sbjct: 277 APDVVTYNTLMRGL 290
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 74/178 (41%), Gaps = 2/178 (1%)
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
G+ ++ AL + D L Y + I ++AGR++ A + FE M P
Sbjct: 49 GRLDDVDAALASARSHLAPDSL--QPLYVASIQAYARAGRLRAAVDAFERMDLFACPPAA 106
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
YN ++ + + + A K+ +M PD T+ LK C R V LL
Sbjct: 107 PAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRS 166
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ + Y ++VRGL G A F+EM+ + + P +T+ + L +K
Sbjct: 167 LSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQK 224
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 160/342 (46%), Gaps = 4/342 (1%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
AT ++ R G +DA GM + A + L+ L + V A V
Sbjct: 129 ATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDG 188
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ + C P +NIL+ CK R A + + M +G P+ V+Y I+ CRE
Sbjct: 189 MLCRGCAP-DVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREG 247
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
D + + L + +GCKP+ + Y V+ ++ +A ++ ++M ++C P+ + +
Sbjct: 248 DVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLN 307
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+I L + G ++ E M K G NV+TYN +IS C + ++AL+LL M+
Sbjct: 308 VIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSF 367
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
CKPD TY +LK C R + L+ M +ND D T+ +++ + G + A
Sbjct: 368 GCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQA 427
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
F++M KG P +TY + L K ++ A E +N++
Sbjct: 428 FEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEM 469
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/434 (23%), Positives = 194/434 (44%), Gaps = 21/434 (4%)
Query: 93 HETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAK 152
H D+D +++ + PD V ++N LV RR PA
Sbjct: 76 HRGDLDAALRLVGSSPRPPD----------VPLANRLVRDLCRRGR----PADA--ARVV 119
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
G T Y +VD ++ +V M + A + ++ L GR
Sbjct: 120 EACGPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYA-HNPLIHALCERGR 178
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEFKDCIPLSSQIFN 270
DA+ GM G D ++L+ KG A ++ F+ + C P ++ +N
Sbjct: 179 VADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEP-NNVTYN 237
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
++I C+ VD A++ + + +G P+ V+Y ++ +C + + D+ L EM +
Sbjct: 238 VIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRE 297
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
C P+ T ++++ L + + + EKM C + Y+++I + + G V A
Sbjct: 298 NCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSA 357
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+ +M+ G P+++TYNT++ C+ E+A +L+ KM ++ PD T+ ++
Sbjct: 358 LELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISF 417
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+K + + M + + ++ TY++++ GL ++GK+E A EM +KG
Sbjct: 418 WCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGF-NT 476
Query: 511 HSTYKMLEEKLEKK 524
Y++L E L K+
Sbjct: 477 DKMYRVLTESLNKE 490
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 168/361 (46%), Gaps = 37/361 (10%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF- 255
+ T + +++ +G Y A+E M+ G E + +V++D + + V+ A ++
Sbjct: 198 VVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLN 257
Query: 256 -LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
L + C P ++ +N ++ G+C + DA + + EM ++ P+ + I CR+
Sbjct: 258 SLPSRGCKP-NTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRK 316
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+KV L++M + GC +V+TY V+ + + ++ AL++ M+S C PD Y
Sbjct: 317 GLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTY 376
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++++ L A R +DA E+ M + +P+ T+NT+IS C + A ++ ++M E
Sbjct: 377 NTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPE 436
Query: 435 DLCKPDCETYAPLLKMCCRKKRMK----VLNFLLTHMFKND------------------- 471
C P+ TY+ ++ + +M+ +LN + F D
Sbjct: 437 KGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEV 496
Query: 472 -----------VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+S Y +++ GL +GK + A +M+S G +P STY +L E
Sbjct: 497 VQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEG 556
Query: 521 L 521
L
Sbjct: 557 L 557
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/388 (23%), Positives = 161/388 (41%), Gaps = 52/388 (13%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMD----ELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
YN ++ K + + EL+ M E NN T + I+ + R G D A E
Sbjct: 201 YNILLQAACKGRGYRQALELIDFMRAEGCEPNN-----VTYNVIIDAMCREGDVDQAREL 255
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKG-NSVEH---AYKVFLEF-KDCIPLSSQIFNILIH 274
+ G + +T V +T++KG S+E A ++ E ++ P + N++I+
Sbjct: 256 LNSLPSRGCKPNT----VNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIIN 311
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
C+ + +++M + G + +VV+Y I C + + + L MQ GCKP
Sbjct: 312 TLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKP 371
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
++TY V+ L A + +A ++ KM +D LPD S ++++I + G + A E+F
Sbjct: 372 DIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVF 431
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLL------------------------- 429
+ M ++G PN TY+T+I + E AL+LL
Sbjct: 432 KQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKED 491
Query: 430 ---------QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
K+++ P Y +L CR + +L M D TY
Sbjct: 492 KIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYI 551
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIV 508
L+ GL G + A + S+ ++
Sbjct: 552 ILIEGLFYEGYSKEARELLSRLCSRDVL 579
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 4/216 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T +T+++ L R++DA E M + D + ++ + + A++VF
Sbjct: 373 IVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFK 432
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ K C P +S ++ +I G K K++ A + + EM +GF+ D + Y E +E
Sbjct: 433 QMPEKGCNP-NSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKE 490
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+V + ++Q+ G P + Y V+ L + + + A+ V M S C+PD S Y
Sbjct: 491 DKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTY 550
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
LI L G K+A E+ + + V+ N L N
Sbjct: 551 IILIEGLFYEGYSKEARELLSRLCSRDVLSNSLIKN 586
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 105/243 (43%), Gaps = 3/243 (1%)
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
D A++ + PDV + CR + D + ++ G + + TY ++
Sbjct: 79 DLDAALRLVGSSPRPPDVPLANRLVRDLCRRG---RPADAARVVEACGPEATAATYGALV 135
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+A + +A +V M + ++ LI L + GRV DA + + M +G
Sbjct: 136 DGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCA 195
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P+V+TYN ++ +AC AL+L+ M + C+P+ TY ++ CR+ + L
Sbjct: 196 PDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQAREL 255
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
L + + Y ++++G + A +EM+ + P +T ++ L +
Sbjct: 256 LNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCR 315
Query: 524 KRL 526
K L
Sbjct: 316 KGL 318
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 93/208 (44%), Gaps = 1/208 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ L + ++ EL+ +M + N+ +T +TI+ + G A E F+ M
Sbjct: 376 YNTVLKGLCSADRWEDAEELMIKMSQ-NDRLPDNSTFNTIISFWCQKGLILQAFEVFKQM 434
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
+ G ++ S ++ L K +E A ++ E + + +++ +L K K++
Sbjct: 435 PEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIE 494
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+ + + ++ G SP V Y + CR D L +M GC P TY I++
Sbjct: 495 EVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILI 554
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDT 371
L EA ++ ++ S D L ++
Sbjct: 555 EGLFYEGYSKEARELLSRLCSRDVLSNS 582
>gi|42573413|ref|NP_974803.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214363|sp|Q3E9F0.1|PP392_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g18475
gi|110737103|dbj|BAF00503.1| hypothetical protein [Arabidopsis thaliana]
gi|332005185|gb|AED92568.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 506
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 194/394 (49%), Gaps = 6/394 (1%)
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
+L + D F A Q G+ H Y+ ++D L + KKF + ++ +M +
Sbjct: 61 SLMKRERDPQGVLDIFNKASQQKGFNHNNATYSVLLDNLVRHKKFLAVDAILHQM-KYET 119
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG-VEKDTRALSVLMDTLVKGNSVEHA 251
+ +MR R +D +E F ++ V+ A+S ++ L+ V +
Sbjct: 120 CRFQESLFLNLMRHFSRSDLHDKVMEMFNLIQVIARVKPSLNAISTCLNLLIDSGEVNLS 179
Query: 252 YKVFLEFKDCIPL--SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS-PDVVSYTCFI 308
K+ L K + L ++ IFNIL+ CK ++ A ++EM + G S P+ ++Y+ +
Sbjct: 180 RKLLLYAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLM 239
Query: 309 EHYCREKDFRKVDDTLKEMQEK-GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
+ ++ + ++M K G P +T+ ++++ +A ++ A K+ + MK + C
Sbjct: 240 DCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMINGFCRAGEVERAKKILDFMKKNGC 299
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P+ YS+L+ K G++++A + F+++KK G+ + + Y T+++ C E + A+K
Sbjct: 300 NPNVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMK 359
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
LL +M+ C+ D TY +L+ + R + +L V ++ G+Y ++ L
Sbjct: 360 LLGEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALC 419
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+G+LE A F M +GI P+H+T+ L +L
Sbjct: 420 CNGELEKAVKFLSVMSERGIWPHHATWNELVVRL 453
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 158/356 (44%), Gaps = 35/356 (9%)
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
+AK G ++N +V K+ + +V+EM Y + T ST+M L
Sbjct: 185 YAKHNLGLQPNTCIFNILVKHHCKNGDINFAFLVVEEMKRSGISYPNSITYSTLMDCLFA 244
Query: 210 GGRYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI 268
R +AVE F M K G+ D P++
Sbjct: 245 HSRSKEAVELFEDMISKEGISPD-------------------------------PVT--- 270
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FN++I+G+C+ +V+ A+K + M + G +P+V +Y+ + +C+ ++ T E++
Sbjct: 271 FNVMINGFCRAGEVERAKKILDFMKKNGCNPNVYNYSALMNGFCKVGKIQEAKQTFDEVK 330
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+ G K + YT +M+ + + +EA+K+ +MK+ C DT Y+ ++ LS GR +
Sbjct: 331 KTGLKLDTVGYTTLMNCFCRNGETDEAMKLLGEMKASRCRADTLTYNVILRGLSSEGRSE 390
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A ++ + +GV N +Y ++++ C E E A+K L M E P T+ L+
Sbjct: 391 EALQMLDQWGSEGVHLNKGSYRIILNALCCNGELEKAVKFLSVMSERGIWPHHATWNELV 450
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
C ++ +L + + ++ ++V + + KL + ++S
Sbjct: 451 VRLCESGYTEIGVRVLIGFLRIGLIPGPKSWGAVVESICKERKLVHVFELLDSLVS 506
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/323 (19%), Positives = 126/323 (39%), Gaps = 40/323 (12%)
Query: 114 VVEALKGCGVSVSNSLVEQTLRR--FSNDLT-PAFGFFTWAKTQTGYMHTPEMYNTMVDV 170
VVE +K G+S NS+ TL F++ + A F ++ G P +N M++
Sbjct: 218 VVEEMKRSGISYPNSITYSTLMDCLFAHSRSKEAVELFEDMISKEGISPDPVTFNVMIN- 276
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
FC R G + A + MKK G
Sbjct: 277 -----GFC------------------------------RAGEVERAKKILDFMKKNGCNP 301
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ S LM+ K ++ A + F E K + L + + L++ +C+ + D+A K +
Sbjct: 302 NVYNYSALMNGFCKVGKIQEAKQTFDEVKKTGLKLDTVGYTTLMNCFCRNGETDEAMKLL 361
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
EM D ++Y + E + L + +G + +Y I+++AL
Sbjct: 362 GEMKASRCRADTLTYNVILRGLSSEGRSEEALQMLDQWGSEGVHLNKGSYRIILNALCCN 421
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
++ +A+K M P + ++ L+ L ++G + + + G++P ++
Sbjct: 422 GELEKAVKFLSVMSERGIWPHHATWNELVVRLCESGYTEIGVRVLIGFLRIGLIPGPKSW 481
Query: 410 NTMISSACARSEEENALKLLQKM 432
++ S C + + +LL +
Sbjct: 482 GAVVESICKERKLVHVFELLDSL 504
>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
Length = 764
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 174/363 (47%), Gaps = 10/363 (2%)
Query: 164 YNTMVDVLGKSKKF---CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
+ +++D LGK + ++E + + D++ N + ++++R + R +D + +
Sbjct: 343 FCSLIDGLGKQGRVDDAYRIYERMLDADQIPN----VVVYTSLIRNFFKCDRKEDGHKMY 398
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCK 278
+ M + G D L+ MD + K E +F E K +P ++ ++ILIH K
Sbjct: 399 KEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLP-DTRSYSILIHSLVK 457
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ + M QG D +Y I+ +C+ K L+EM+ G P+V+T
Sbjct: 458 AGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVT 517
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y V+ L K +++EA ++E+ KS+ + YSSLI K GRV +A + E+M
Sbjct: 518 YGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMM 577
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++G+ PNV T+N ++ E AL Q M++ C P+ TY L+ C+ ++
Sbjct: 578 QKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFN 637
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
M K + + TY +++ GL +SG + A S FE + G +P ++Y +
Sbjct: 638 KAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMI 697
Query: 519 EKL 521
E L
Sbjct: 698 EGL 700
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/441 (24%), Positives = 190/441 (43%), Gaps = 43/441 (9%)
Query: 122 GVSVSNSLVEQTLRRFSND--LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCL 179
G V+ L+ +R FS + + A K+ T + +YN +D GK K +
Sbjct: 91 GYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNT-FDADIVLYNVCIDCFGKVGKVDM 149
Query: 180 MWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKK------------- 225
W+ EM NG V T +++M L + R D+AVE F M++
Sbjct: 150 AWKFFHEMKA--NGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAYNTM 207
Query: 226 ---YG-----------VEKD--------TRALSVLMDTLVKGNSVEHAYKVFLEFK-DCI 262
YG +E+ A + ++ L K + A ++F E K D +
Sbjct: 208 IMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKRDAM 267
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P + +NI+I CK V+ A K M + G P+V + I+ C+ + +
Sbjct: 268 P-NLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLDEACS 326
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+ M K C P T+ ++ LGK ++++A ++YE+M D +P+ Y+SLI
Sbjct: 327 IFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLIRNFF 386
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K R +D ++++++M + G P+++ NT + E E L ++++ PD
Sbjct: 387 KCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFLPDTR 446
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
+Y+ L+ + + L M +D Y +++ G +SGK+ A EEM
Sbjct: 447 SYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEM 506
Query: 503 ISKGIVPYHSTYKMLEEKLEK 523
+ G P TY + + L K
Sbjct: 507 KTMGHHPTVVTYGSVVDGLAK 527
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 155/350 (44%), Gaps = 37/350 (10%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ + +T++ L G D + F M++ G E + L+ L+ + V+ A +
Sbjct: 60 AFSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLL 119
Query: 256 LEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E K + ++N+ I + K KVD A K EM G PD V+YT + C+
Sbjct: 120 DEMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKA 179
Query: 315 KDFRKVDDTLKEMQE-----------------------------------KGCKPSVITY 339
+ + ++M++ KGC PSV+ Y
Sbjct: 180 NRLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAY 239
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ LGK + ++AL+++E+MK D +P+ Y+ +I +L KAG V+ A ++ + MK+
Sbjct: 240 NCILTCLGKKGKTDKALRIFEEMKR-DAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKE 298
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G+ PNV T N MI C + + A + + M+ +C PD T+ L+ ++ R+
Sbjct: 299 AGLFPNVRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDD 358
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ M D + Y SL+R + + E ++EM+ G P
Sbjct: 359 AYRIYERMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSP 408
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 131/249 (52%), Gaps = 1/249 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK- 259
+T++ + G+ + A + MK G ++D L K + ++ AY +F E K
Sbjct: 484 NTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKS 543
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ I L+ I++ LI G+ K +VD+A M+EM Q+G +P+V ++ C ++ + ++ +
Sbjct: 544 NGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINE 603
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ M++ C P+ ITY I+++ L K ++ N+A +++M+ P+T Y+++I
Sbjct: 604 ALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMIS 663
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L+K+G V A+ +FE + G +P+ +YN MI + +A +L ++ C
Sbjct: 664 GLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKGCSI 723
Query: 440 DCETYAPLL 448
+T LL
Sbjct: 724 HTKTCVALL 732
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 117/494 (23%), Positives = 220/494 (44%), Gaps = 27/494 (5%)
Query: 50 SWIKFF-----DSQSPDEDFVIPSLAGWV-ESHRLNEKSRISSRVLSENHETDVDKISKI 103
+W KFF + PD D S+ G + +++RL+E I + + +N +
Sbjct: 150 AW-KFFHEMKANGLVPD-DVTYTSMMGVLCKANRLDEAVEIFEQ-MEQNRQVPCAYAYNT 206
Query: 104 LSKQYQSPDKVVEAL--------KGC--GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
+ Y S K EA KGC V N ++ ++ D A F K
Sbjct: 207 MIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTD--KALRIFEEMKR 264
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
M YN ++ +L K+ +++ M E + ++ T++ ++ RL + +
Sbjct: 265 DA--MPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGL-FPNVRTINIMIDRLCKAQKL 321
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNI 271
D+A F GM D L+D L K V+ AY+++ D IP + ++
Sbjct: 322 DEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIP-NVVVYTS 380
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI + K + +D K KEM + G SPD++ +++ + + K +E++ +G
Sbjct: 381 LIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARG 440
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P +Y+I++H+L KA E ++Y MK C+ DT Y+++I K+G+V A
Sbjct: 441 FLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAY 500
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++ E+MK G P V+TY +++ + A L ++ + + + + Y+ L+
Sbjct: 501 QLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGF 560
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
+ R+ ++ M + ++ + T+ L+ GL+++ ++ A F+ M P
Sbjct: 561 GKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCTPNQ 620
Query: 512 STYKMLEEKLEKKR 525
TY +L L K R
Sbjct: 621 ITYCILINGLCKVR 634
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 114/257 (44%), Gaps = 1/257 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ LI + + D +M + G+ +V T I + RE L EM+
Sbjct: 64 YTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMK 123
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
++ Y + + GK +++ A K + +MK++ +PD Y+S++ +L KA R+
Sbjct: 124 SNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLD 183
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A EIFE M++ VP YNTMI + + + A LL++ C P Y +L
Sbjct: 184 EAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCIL 243
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C KK + K D + TY ++ L ++G +E A + M G+
Sbjct: 244 T-CLGKKGKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLF 302
Query: 509 PYHSTYKMLEEKLEKKR 525
P T ++ ++L K +
Sbjct: 303 PNVRTINIMIDRLCKAQ 319
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/249 (23%), Positives = 112/249 (44%), Gaps = 4/249 (1%)
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTC--FIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+TR D ++ + EM GF P +YTC + + + + D L+ M+ +P+
Sbjct: 3 RTRNFDYLEQILGEMSIAGFGP--TNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPA 60
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
YT ++ AL + + + L ++ +M+ + ++LI + S+ GRV A + +
Sbjct: 61 FSAYTTLIGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLD 120
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+MK +++ YN I + + A K +M+ + PD TY ++ + C+
Sbjct: 121 EMKSNTFDADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKAN 180
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
R+ + M +N A Y +++ G +GK + A S E +KG +P Y
Sbjct: 181 RLDEAVEIFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYN 240
Query: 516 MLEEKLEKK 524
+ L KK
Sbjct: 241 CILTCLGKK 249
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 117/267 (43%), Gaps = 42/267 (15%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
S + A+ KT G+ T Y ++VD L K + + L +E N ++
Sbjct: 493 SGKVNKAYQLLEEMKTM-GHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKS-NGIELNQ 550
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
S+++ + GR D+A M + G+ + + L+D LVK + A F
Sbjct: 551 VIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQS 610
Query: 258 FKD--CIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
KD C P +QI + ILI+G CK RK + A +EM +QG P+ ++YT I
Sbjct: 611 MKDLKCTP--NQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMIS----- 663
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
L K+ + +A ++E+ ++ +PD++ Y
Sbjct: 664 ------------------------------GLAKSGNVAQASSLFERFRASGGIPDSASY 693
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQG 401
+++I LS A R DA ++FE+ + +G
Sbjct: 694 NAMIEGLSIANRALDAYQLFEETRLKG 720
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 199/468 (42%), Gaps = 68/468 (14%)
Query: 136 RFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV 195
R D+ A +F + HT Y M++ LG+ + L+++M +L
Sbjct: 54 RTETDIVLASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQM-KLEGISC 112
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S ++ R G + A++ F ++++G + + + L+D ++ N + ++
Sbjct: 113 SEDLFINVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIY 172
Query: 256 LEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT--------- 305
K D + +NIL+ CK +VD A K + EM +G PDVVSYT
Sbjct: 173 SNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKL 232
Query: 306 ---------------------CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
I +CRE ++V L +M EKG P+VITY+ V+
Sbjct: 233 GKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVIS 292
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
+L + AL V+ KM C P+ ++SL+ GRV +A I+ M ++G P
Sbjct: 293 SLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEP 352
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL---------------- 448
NV+ YNT+I C+ + A+ + KME + C P+ TY L+
Sbjct: 353 NVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIW 412
Query: 449 -------------------KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ CR L+ M ++ + T+ + ++GL S
Sbjct: 413 NKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCS 472
Query: 490 GKLELACSFFEEMISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKL 536
G++E A + F +M G P TY ++L+ L++ R+ A E + ++
Sbjct: 473 GRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEM 520
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 110/481 (22%), Positives = 212/481 (44%), Gaps = 66/481 (13%)
Query: 80 EKSRISSRVLSE--NHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNS-----LVEQ 132
+ ++++ +++ E E DVD + +L + E L ++V N+ L EQ
Sbjct: 76 QHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLF---INVINTYRRVGLAEQ 132
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
L+ F + + G T ++YN ++D + +F ++ + M +
Sbjct: 133 ALKMF------------YRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKR-DG 179
Query: 193 GYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
++ T + +++ L + R D A + M G E D + + ++ ++ K VE A
Sbjct: 180 KEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAR 239
Query: 253 KVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
++ + F+ + ++N LI+G+C+ KV + + +M ++G P+V++Y+ I
Sbjct: 240 ELSIRFQPNV----SVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLS 295
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVM----------------------------- 343
+ +M +GC P+V T+T +M
Sbjct: 296 GIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVV 355
Query: 344 ------HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
H L ++ EA+ V KM+ + C P+ S Y +LI +KAG + A+EI+ M
Sbjct: 356 AYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKM 415
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
G +PNV+ Y +M++ C S A L++KM D C P+ T+ +K C R+
Sbjct: 416 MTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRV 475
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG----IVPYHST 513
+ L M + S + TY ++ GL++ +++ A EM KG +V Y++
Sbjct: 476 ECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTI 535
Query: 514 Y 514
+
Sbjct: 536 F 536
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 152/322 (47%), Gaps = 4/322 (1%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M + G++ + S ++ +L +VE A V+ + + C P + F L+ G+
Sbjct: 275 MVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSP-NVYTFTSLMKGYFMRG 333
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+V +A M ++GF P+VV+Y I C + +M+ GC P+V TY
Sbjct: 334 RVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYG 393
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ KA + A +++ KM ++ C+P+ Y+S++ +L ++ A + E M
Sbjct: 394 ALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTD 453
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
PN +T+NT I C E A+ L +ME+ C P+ +TY +L ++ R+K
Sbjct: 454 NCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEA 513
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L+T M + + ++ TY ++ G GK E A +M+ G+ P TY L
Sbjct: 514 LELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYA 573
Query: 521 L-EKKRLGNAKERINKLLAHAK 541
+ ++ A + ++KL A K
Sbjct: 574 YCMQGKVKTAIQLLDKLSAGGK 595
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 169/361 (46%), Gaps = 11/361 (3%)
Query: 163 MYNTMVDVLGKSKK----FCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
+YN +++ + K F L+ ++V++ + N + T ST++ L G + A+
Sbjct: 251 VYNALINGFCREYKVKEVFLLLGQMVEKGIDPN-----VITYSTVISSLSGIGNVELALA 305
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWC 277
+ M G + + LM V A ++ ++ + +N LIHG C
Sbjct: 306 VWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLC 365
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K+ +A +M + G SP+V +Y I+ + + D + +M GC P+V+
Sbjct: 366 SHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVV 425
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
YT +++ L ++ ++A + EKM +D+C P+T +++ I L +GRV+ A +F M
Sbjct: 426 VYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQM 485
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
++ G PN+ TYN ++ + + AL+L+ +MEE + + TY + C +
Sbjct: 486 EQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKF 545
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG-IVPYHSTYKM 516
+ LL M V DA TY +L GK++ A +++ + G VP + Y
Sbjct: 546 EEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTS 605
Query: 517 L 517
L
Sbjct: 606 L 606
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 155/326 (47%), Gaps = 4/326 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T +++M+ GR +A+ + M + G E + A + L+ L + A V +
Sbjct: 321 TFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKM 380
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
E C P S + LI G+ K + A + +M G P+VV YT + CR
Sbjct: 381 ERNGCSPNVST-YGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSM 439
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
F + +++M C P+ +T+ + L + ++ A+ ++ +M+ C P+ Y+
Sbjct: 440 FSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNE 499
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
++ L K R+K+A E+ +M+++G+ N++TYNT+ C + E ALKLL KM
Sbjct: 500 VLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGG 559
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM-DAGTYASLVRGLIESGKLELA 495
KPD TY L C + ++K LL + + + Y SL+ G+ +E A
Sbjct: 560 VKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEA 619
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKL 521
+ ++M+++GI +T+ L L
Sbjct: 620 VLYLDKMLNEGICLNAATWNALVRGL 645
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 164/380 (43%), Gaps = 53/380 (13%)
Query: 47 SLPSWIKFFDSQSPDEDFVIPSLA-GWVESHRLNEKSRISSRVLSENHETDVDKISKILS 105
+L W K F + SL G+ R+ E I +R+ E E +V + ++
Sbjct: 303 ALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLI- 361
Query: 106 KQYQSPDKVVEAL--------KGCGVSVS--NSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
S K+ EA+ GC +VS +L++ + + DL A W K T
Sbjct: 362 HGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAK--AGDLVGASEI--WNKMMT 417
Query: 156 -GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G + +Y +MV+VL +S F W L+++M +N + T +T ++ L GR +
Sbjct: 418 NGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMST-DNCPPNTVTFNTFIKGLCCSGRVE 476
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
A+ F M++YG + + + ++D L+K N
Sbjct: 477 CAINLFCQMEQYGCSPNIKTYNEVLDGLLKEN---------------------------- 508
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
++ +A + + EM ++G ++V+Y +C F + L +M G KP
Sbjct: 509 ------RIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKP 562
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDD-CLPDTSFYSSLIFILSKAGRVKDANEI 393
ITY + +A ++ A+++ +K+ + +P+ + Y+SL++ + V++A
Sbjct: 563 DAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLY 622
Query: 394 FEDMKKQGVVPNVLTYNTMI 413
+ M +G+ N T+N ++
Sbjct: 623 LDKMLNEGICLNAATWNALV 642
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 186/379 (49%), Gaps = 10/379 (2%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ P + T++ L + +F ++EM L N + ++T++ L + G++ D
Sbjct: 483 GFSINPGAFTTIIHWLCMNSRFESALRFLREM-LLRNMRPNDGLLTTLVGGLCKEGKHSD 541
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIH 274
AVE + + + G + + L+ L K +++ A ++ + + L +N LI
Sbjct: 542 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 601
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G CK KV++ K EM +QG PD +Y I CR + + E + + P
Sbjct: 602 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 661
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V TY +++ KA +I E K++ ++ + + ++ Y++LI + G +A ++
Sbjct: 662 NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLH 721
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+DM+ +G+ P TY+++I C E+A L+ +M ++ P+ Y L+ C+
Sbjct: 722 DDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKL 781
Query: 455 KRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+M KV+N +L M D+ + TY ++ G +SG ++ A EM+ KGIVP T
Sbjct: 782 GQMDKVVN-VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVT 840
Query: 514 YKML------EEKLEKKRL 526
Y +L E K+E+ +L
Sbjct: 841 YNVLTNGFCKEGKIEEGKL 859
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 173/361 (47%), Gaps = 4/361 (1%)
Query: 160 TPEMY--NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
+P++Y +T ++ K K +L +M++L ++ T + ++ L + G D+A
Sbjct: 310 SPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVS-PNVVTYNNLIHGLCKHGNLDEAF 368
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGW 276
M K GV SVL++ L+K A V E + + ++N LI G+
Sbjct: 369 RFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGY 428
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK + DA + +M +G +P+ V+ I+ +C+ + + L+EM +G +
Sbjct: 429 CKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINP 488
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+T ++H L + AL+ +M + P+ ++L+ L K G+ DA E++
Sbjct: 489 GAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFR 548
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
+ ++G N++T N +I C + A++LL+KM E D TY L+ CC++ +
Sbjct: 549 LLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 608
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ L M K + D TY L+ G+ GKL+ A + + E S+ +VP TY +
Sbjct: 609 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 668
Query: 517 L 517
+
Sbjct: 669 M 669
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 167/356 (46%), Gaps = 5/356 (1%)
Query: 184 VKEMDELNNGYVSLATMSTIMRRL---VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
+ +++E+ V++A + ++ R + +A+ FR + GV + + L+
Sbjct: 228 MADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLS 287
Query: 241 TLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
+LVK N +E +Y VF + + +F+ I+ +CK KV+DA + +M + G SP+
Sbjct: 288 SLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPN 347
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
VV+Y I C+ + + ++M + G ++ITY+++++ L K ++ NEA V +
Sbjct: 348 VVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLK 407
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+ P+ Y++LI K G + DA I DM +G+ PN +T N++I C
Sbjct: 408 ETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIG 467
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+ E A +L++M + + ++ C R + L M ++ + G
Sbjct: 468 QMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLT 527
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
+LV GL + GK A + ++ KG T L L K GN +E + L
Sbjct: 528 TLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKT--GNMQEAVRLL 581
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 136/283 (48%), Gaps = 11/283 (3%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKK----FCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
+ G++ YNT++ K K F L E+VK+ E + T + ++ + R
Sbjct: 586 ERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDT-----FTYNLLIHGMCR 640
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQI 268
G+ D+AV + K + + V++D K + +E K+F E + L+S +
Sbjct: 641 IGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVV 700
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N LI +C+ +A K +M +G P +Y+ I C + EM+
Sbjct: 701 YNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMR 760
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
++G P+V+ YT ++ K Q+++ + V ++M S D P+ Y+ +I SK+G +K
Sbjct: 761 KEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMK 820
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
A ++ +M +G+VP+ +TYN + + C + E KLL +
Sbjct: 821 TAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG-KLLAE 862
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 167/377 (44%), Gaps = 45/377 (11%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ +T++ V GR DDA M YG+ D + L+ K V A +V
Sbjct: 353 IVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVL 412
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ K C P + + IL+ G+CK K+D+A + EM G P+ V + C I +C+
Sbjct: 413 HDMRNKGCKP-NVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCK 471
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E + + +EM KGCKP V T+ ++ L + +I AL + M S+ + +T
Sbjct: 472 EHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVT 531
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI + G +K+A ++ +M QG + +TYN++I C E + A L +KM
Sbjct: 532 YNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKML 591
Query: 434 ED---------------LCK--------------------PDCETYAPLLKMCCRKKRMK 458
D LC+ PD T+ L+ CR R++
Sbjct: 592 RDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 651
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML- 517
+ + + D T+ +L+ L + G + AC +E I G VP H T+ +L
Sbjct: 652 DGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711
Query: 518 -----EEKLEKKRLGNA 529
+E L+++R NA
Sbjct: 712 QSIIPQETLDRRRFYNA 728
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 111/469 (23%), Positives = 196/469 (41%), Gaps = 73/469 (15%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
+++ + F+W +Q GY H+ ++Y ++ LG + +F + L+ +M + G V +
Sbjct: 90 NVSTSMELFSWTGSQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKD--EGIVFKES 147
Query: 200 M-STIMRRLVRGGRYDDAVEAFRGMKK-YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
+ +IMR + G M+ Y E ++ +V+++ LV GN + A VF +
Sbjct: 148 LFISIMRDYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYD 207
Query: 258 -FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
IP + F +++ +C ++D A +++M + G P+ V Y I +
Sbjct: 208 MLSRKIPPTLFTFGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNR 267
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ L+EM GC P T+ V+ L K +INEA K+ +M PD Y
Sbjct: 268 VNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGY 327
Query: 377 LIFILSKAGRVKDANEIFEDMKKQ--------------------------------GVVP 404
L+ L K GRV A ++F + K G+VP
Sbjct: 328 LMNGLCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVP 387
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM----KVL 460
+V TYN++I AL++L M CKP+ +Y L+ C+ ++ VL
Sbjct: 388 DVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVL 447
Query: 461 N--------------------FLLTHMFKNDVSM-----------DAGTYASLVRGLIES 489
N F H V + D T+ SL+ GL E
Sbjct: 448 NEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEV 507
Query: 490 GKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKLL 537
+++ A +MIS+G+V TY ++ L + + A++ +N+++
Sbjct: 508 DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 1/87 (1%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
N +++ L +S E KEM L + T ++++ L R GR +D + FR ++
Sbjct: 603 NILINGLCRSGMVEEAVEFQKEM-VLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQ 661
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHA 251
G+ DT + LM L KG V A
Sbjct: 662 AEGIPPDTVTFNTLMSWLCKGGFVYDA 688
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 182/400 (45%), Gaps = 20/400 (5%)
Query: 145 FGFFTW--AKTQTGYMHTPEMYNTMVD-----------------VLGKSKKFCLMWELVK 185
F FFTW + + + HT Y TM+ V+ + K
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVFAA 60
Query: 186 EMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
++ N + S ++ + G DA+E +R +++ + +++ L+K
Sbjct: 61 VLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 246 NSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+ + + E +C P S FNIL+H +CK + AQ + + G P VVSY
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ Y R D + M G +P V TY+++++ L K +++ A +++++M
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLV 240
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
+P+ +++LI K GRV A EI++ M Q ++P+++TYNT+I C + + +
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A L+ +M KPD TY L+ CC++ + M + ++ +D Y +L+
Sbjct: 301 AHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
GL + G+ A EM+S G+ P TY M+ + KK
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKK 400
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 127/255 (49%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K + ++ A ++F
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANELF 235
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K +P + F LI G CK +VD A + K+M Q PD+++Y I C+
Sbjct: 236 DEMLVKGLVP-NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK 294
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ D + EM KG KP TYT ++ K ++ A + ++M ++ D
Sbjct: 295 KGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 354
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P+ TY +I+ C + + KLL++M
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMH 414
Query: 434 EDLCKPDCETYAPLL 448
D P TY L+
Sbjct: 415 RDGHAPSVVTYNVLM 429
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 147/317 (46%), Gaps = 4/317 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W +E+ L GY SL + +M R + G A F + K+G+
Sbjct: 117 LMKLKYFKLVWGFYEEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLR 174
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKV-FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
+ + LM+ ++ ++ +++ + +++LI+G CK K+D A +
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANEL 234
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
EM +G P+ V++T I+ +C+ + K+M + P +ITY +++ L K
Sbjct: 235 FDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK 294
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
+ +A + ++M PD Y++LI K G + A E + M ++ + + +
Sbjct: 295 KGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 354
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y +IS C +A K+L++M KPD TY ++ C+K + + LL M
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMH 414
Query: 469 KNDVSMDAGTYASLVRG 485
++ + TY L+ G
Sbjct: 415 RDGHAPSVVTYNVLMNG 431
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 196/422 (46%), Gaps = 10/422 (2%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
S+S + +L + L PA F +A + + +N M+ L + K E
Sbjct: 78 SLSLPIPTASLHPLLSSLPPAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALE 137
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK-KYGVEKDTRALSVLMDT 241
L+++M N T +T++ GR +E R M+ + G+ D + ++
Sbjct: 138 LLRQMPSPNA-----VTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISG 192
Query: 242 LVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
K VE A KVF E + + ++ ++N LI G+C ++ A + EM +G S
Sbjct: 193 WCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSM 252
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
V +Y F+ E + ++EM EKG P TY I+++ K + +A+K++
Sbjct: 253 TVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMF 312
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
E M Y+SLI LS G V++ + +F D ++G+ P++ YN +I+S C
Sbjct: 313 EVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTG 372
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ + A +++ +ME+ PD TY L++ C R+ L+ M K + D +Y
Sbjct: 373 GDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSY 432
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLA 538
+L+ G G ++ A +EM+ KG P TY + + L + G+A++ + +++
Sbjct: 433 NTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVG 492
Query: 539 HA 540
+
Sbjct: 493 NG 494
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 132/270 (48%), Gaps = 4/270 (1%)
Query: 220 FRG-MKKYGVEKDTRALSVLMDTL-VKGNSVE-HAYKVFLEFKDCIPLSSQIFNILIHGW 276
+RG M GV ++ + TL ++G + E HA + K P + +NILI+G+
Sbjct: 241 YRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAP-DAFTYNILINGY 299
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK K A K + M +G VV+YT I + ++ D + +G +P +
Sbjct: 300 CKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDL 359
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
Y ++++ ++ A ++ +M+ PD Y++L+ L GR+ +A + E+
Sbjct: 360 FMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEE 419
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M K+G+ P++++YNT+IS + + ++A+K+ +M P TY ++K C +
Sbjct: 420 MTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQ 479
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
L+ M N ++ D TY SL+ GL
Sbjct: 480 GGDAEDLVKEMVGNGITPDDSTYISLIEGL 509
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/268 (23%), Positives = 116/268 (43%), Gaps = 4/268 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYD 214
G T YN V L + LV+EM E G A T + ++ + G+
Sbjct: 249 GVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGE--KGLAPDAFTYNILINGYCKEGKEK 306
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILI 273
A++ F M G+ + L+ L V+ ++F + + I ++N LI
Sbjct: 307 KAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALI 366
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+ C +D A + M EM ++ +PD V+Y + C + ++EM ++G +
Sbjct: 367 NSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQ 426
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P +++Y ++ I +A+KV ++M P Y+++I L G+ DA ++
Sbjct: 427 PDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDL 486
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSE 421
++M G+ P+ TY ++I E
Sbjct: 487 VKEMVGNGITPDDSTYISLIEGLTTEDE 514
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 73/174 (41%), Gaps = 22/174 (12%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
MYN +++ +E++ EM++ T +T+MR L GR D+A
Sbjct: 361 MYNALINSHCTGGDMDRAFEIMGEMEK-KRITPDDVTYNTLMRGLCLLGRLDEARGLIEE 419
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-----------FNI 271
M K G++ D LV N++ Y + + KD + + ++ +N
Sbjct: 420 MTKRGIQPD----------LVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNA 469
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+I G C + DA+ +KEM G +PD +Y IE E + D +K
Sbjct: 470 MIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDERLAAGDDVK 523
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 9/155 (5%)
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
+L +Y ++KS T+ L+ L A A +F D+ + + + T+N M+
Sbjct: 69 SLSLYSRLKSLSLPIPTASLHPLLSSLPPA----PAFVLFADIFRLRLPLSTTTFNIMLR 124
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF-KNDVS 473
C + AL+LL++M P+ TY ++ C + R++ ++ M + ++
Sbjct: 125 HLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIA 180
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
D TYA+++ G + GK+E A F+EM+++G V
Sbjct: 181 PDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKV 215
>gi|225451899|ref|XP_002279045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g38730-like [Vitis vinifera]
Length = 590
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 118/469 (25%), Positives = 212/469 (45%), Gaps = 55/469 (11%)
Query: 122 GVSVSNSLVEQTLRRFSND-LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLM 180
G +++++++ Q L S D ++ FF W ++ + H+ + TM+ L K K+F
Sbjct: 35 GSNLTSTILNQVLLNLSLDGCCVSWAFFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKTA 94
Query: 181 WELVKEM---DELNNGYVSLATM---------STIMRRLV----RGGRYDDAVEAFRGMK 224
L++ + D L++ V A + S I+ LV DA++ F M+
Sbjct: 95 QNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHMR 154
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVD 283
+G + A +VL+++L K +KV+ + + + + IFN+LIH CK+ V+
Sbjct: 155 VHGFKPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCKSGDVE 214
Query: 284 DAQKAMKEMFQQ-----------------------------------GFSPDVVSYTCFI 308
A++ + EM + G SPD+V+Y I
Sbjct: 215 KAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVTYNSLI 274
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+CRE R+ +E+ G P+ +TYT ++ + + EAL++ E M+ +
Sbjct: 275 YGFCREGRMREALRLFREIN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLH 332
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P Y+S++ L + G++KDAN + +M ++ V P+ +T NT+I++ C + +A+K+
Sbjct: 333 PGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKV 392
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+KM E KPD T+ L+ C+ + L M S TY+ LV +
Sbjct: 393 KKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYD 452
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
E +E+ KG+ S Y+ L +L K + ERI L+
Sbjct: 453 QDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLM 501
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/350 (22%), Positives = 151/350 (43%), Gaps = 2/350 (0%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ G + ++N ++ KS +L+ EM E + L T +T++ + G
Sbjct: 189 VRVGVVPNIHIFNVLIHACCKSGDVEKAEQLLNEM-ESRFIFPDLFTYNTLISLYCKKGM 247
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNIL 272
+ +A+ M++ GV D + L+ + + A ++F E P + + L
Sbjct: 248 HYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFREINGATP-NHVTYTTL 306
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I G+C+ +++A + + M +G P VV+Y + C E + + L EM E+
Sbjct: 307 IDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKV 366
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+P +T +++A K + A+KV +KM PD + +LI K V A E
Sbjct: 367 EPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKE 426
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+M G P+ TY+ ++ S + +E ++L ++ D Y L++ C
Sbjct: 427 FLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLC 486
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
+ +++ + T M + D+ Y SL ++GK A +EM
Sbjct: 487 KIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 118/239 (49%), Gaps = 2/239 (0%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N LI+G+C+ ++ +A + +E+ G +P+ V+YT I+ YCR D + + M+
Sbjct: 270 YNSLIYGFCREGRMREALRLFREI--NGATPNHVTYTTLIDGYCRVNDLEEALRLREVME 327
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+G P V+TY ++ L + +I +A ++ +M PD ++LI K G +
Sbjct: 328 VEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMG 387
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
A ++ + M + G+ P+ T+ +I C E ++A + L +M + P TY+ L+
Sbjct: 388 SAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLV 447
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + + L + + + +D Y +L+R L + K+E A F M KG+
Sbjct: 448 DSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGM 506
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 121/258 (46%), Gaps = 12/258 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWEL-----VKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
Y T++D +C + +L ++E+ E+ + + T ++I+R+L G+ DA
Sbjct: 303 YTTLID------GYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANR 356
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWC 277
M + VE D + L++ K + A KV + + Q F LIHG+C
Sbjct: 357 LLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFC 416
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K +VD A++ + EM GFSP +Y+ ++ Y + + V E+ KG +
Sbjct: 417 KLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDIS 476
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
Y ++ L K +I A +++ M+ D+ Y+SL + KAG+ A+++ ++M
Sbjct: 477 VYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEM 536
Query: 398 KKQGVVPNVLTYNTMISS 415
K+ ++ + Y +S
Sbjct: 537 DKRRLMITLKIYRCFSAS 554
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 128/309 (41%), Gaps = 43/309 (13%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFR 221
YNT++ + K + +E + D + G VS + T ++++ R GR +A+ FR
Sbjct: 235 YNTLISLYCKKG---MHYEALGIQDRMERGGVSPDIVTYNSLIYGFCREGRMREALRLFR 291
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHA------------------YKVFL------- 256
+ G + + L+D + N +E A Y L
Sbjct: 292 EIN--GATPNHVTYTTLIDGYCRVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEG 349
Query: 257 EFKDCIPLSSQIF-----------NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
+ KD L +++ N LI+ +CK + A K K+M + G PD ++
Sbjct: 350 KIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFK 409
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
I +C+ + + L EM + G PS TY+ ++ + +++ +++
Sbjct: 410 ALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRK 469
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
D S Y +LI L K +++ A IF M+ +G+ + + Y ++ + + A
Sbjct: 470 GLFVDISVYRALIRRLCKIDKIESAERIFTLMQGKGMKGDSVVYTSLAYAYFKAGKAIAA 529
Query: 426 LKLLQKMEE 434
+L +M++
Sbjct: 530 SDMLDEMDK 538
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 154/294 (52%), Gaps = 2/294 (0%)
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
+E+ ++M E + + +L T + +M +L + GR DA + F M++ GV + + L+
Sbjct: 253 FEMYEKMQE-HGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIG 311
Query: 241 TLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L + A +V + K D I + +N LI G+C RK+ A +++ +G SP
Sbjct: 312 GLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSP 371
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+V+Y + +C++ D +KEM+E+G KPS +TYTI++ ++ + +A+++
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLR 431
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
M+ PD YS LI GR+ +A+ +F+ M ++ PN + YNTM+ C
Sbjct: 432 SSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKE 491
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
AL+L ++MEE P+ +Y ++++ C++++ K L+ M + +
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIG 545
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 154/316 (48%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
I+ V+ D ++ F M G + + L+ +V +S + F E K
Sbjct: 99 VIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIK 158
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ L F I+I G C+ +++ + + E+ + GFSP+VV YT I+ C++ + K
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D EM + G + TYT+++H L K + ++YEKM+ P+ Y+ ++ L
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQL 278
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K GR KDA ++F++M+++GV N++TYNT+I C + A +++ +M+ D P+
Sbjct: 279 CKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNL 338
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ C +++ L + +S TY LV G + G A +E
Sbjct: 339 ITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398
Query: 502 MISKGIVPYHSTYKML 517
M +GI P TY +L
Sbjct: 399 MEERGIKPSKVTYTIL 414
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 160/332 (48%), Gaps = 3/332 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ +T++ + G + A + F M K+G+ + +VL+ L K + ++++
Sbjct: 197 NVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMY 256
Query: 256 LEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ ++ P + +N +++ CK + DA K EM ++G S ++V+Y I CR
Sbjct: 257 EKMQEHGVFP-NLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCR 315
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E + ++ + +M+ G P++ITY ++ +++ +AL + +KS P
Sbjct: 316 EMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVT 375
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ L+ K G A ++ ++M+++G+ P+ +TY +I + E A++L ME
Sbjct: 376 YNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSME 435
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E PD TY+ L+ C K RM + L M + + Y ++V G + G
Sbjct: 436 ELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSY 495
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
A F EM K + P ++Y+ + E L K+R
Sbjct: 496 RALRLFREMEEKELPPNVASYRYMIEVLCKER 527
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 111/223 (49%), Gaps = 8/223 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++D +K L +++ SL T + ++ + G A + + M
Sbjct: 341 YNTLIDGFCGVRKLGKALSLCRDLKSRGLS-PSLVTYNILVSGFCKKGDTSGAGKVVKEM 399
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRK 281
++ G++ ++L+DT + +++E A ++ ++ + L+ + +++LIHG+C +
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEE-LGLTPDVHTYSVLIHGFCIKGR 458
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+++A + K M ++ F P+ V Y + YC+E + +EM+EK P+V +Y
Sbjct: 459 MNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
++ L K ++ EA + EKM P S++ ++S+A
Sbjct: 519 MIEVLCKERKSKEAEGLVEKMIDSGIGPS----DSILNLISRA 557
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 6/245 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YNT++ L + K E++ +M D +N +L T +T++ + A+ R
Sbjct: 306 YNTLIGGLCREMKANEANEVMDQMKSDGINP---NLITYNTLIDGFCGVRKLGKALSLCR 362
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTR 280
+K G+ ++L+ K A KV E ++ I S + ILI + ++
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSD 422
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ A + M + G +PDV +Y+ I +C + + K M EK +P+ + Y
Sbjct: 423 NMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYN 482
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K AL+++ +M+ + P+ + Y +I +L K + K+A + E M
Sbjct: 483 TMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDS 542
Query: 401 GVVPN 405
G+ P+
Sbjct: 543 GIGPS 547
>gi|297829236|ref|XP_002882500.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328340|gb|EFH58759.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 871
Score = 145 bits (366), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 180/366 (49%), Gaps = 6/366 (1%)
Query: 160 TPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP+ + +++D LGK + +++ ++M + + S+ +++++ GR +D
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSI-VYTSLIKNFFNHGRKEDGH 502
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHG 275
+ ++ M D + L+ MD + K E +F E K +P ++ ++ILIHG
Sbjct: 503 KIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVP-DARSYSILIHG 561
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
K ++ + M +QG D +Y I+ +C+ K L+EM+ KG +P+
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+TY V+ L K +++EA ++E+ KS + YSSLI K GR+ +A I E
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
++ ++G+ PNV T+N+++ + E AL Q M+E C P+ TY L+ C+ +
Sbjct: 682 ELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ M K + +Y +++ GL ++G + A + F+ + G VP + Y
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Query: 516 MLEEKL 521
+ E L
Sbjct: 802 AMIEGL 807
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 132/544 (24%), Positives = 234/544 (43%), Gaps = 59/544 (10%)
Query: 30 CNPLCTTAESPSSTESPSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRVL 89
CN L T A PS+ + S ++ P +FVI L + +R E R R
Sbjct: 40 CNVLETGAWGPSAENALSALNF-------KPQPEFVIGVLRRLKDVNRAIEYFRWYERRT 92
Query: 90 SENH-ETDVDKISKILSK--QYQSPDKVVE--ALKGCGVSVSNSLVEQTLRRF-SNDLTP 143
H + + ++++ + + D+++ ++ G G SV N+ +E L +N L
Sbjct: 93 ELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSV-NTCIEMVLSCVKANKLRE 151
Query: 144 AFGFFTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATM 200
F + + P Y T++ +M L ++M EL GY ++
Sbjct: 152 GFDV---VQNMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQEL--GYEPTVHLF 206
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK- 259
+T++R + GR D A+ MK ++ D +V +D+ K V+ A+K F E +
Sbjct: 207 TTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAWKFFHEIEA 266
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ + + +I CK ++D+A + + + + P +Y I Y F +
Sbjct: 267 NGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDE 326
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
L+ + KG PSVI Y ++ L K +++EAL+V+E+MK D P+ S Y+ LI
Sbjct: 327 AYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALRVFEEMKKD-AAPNLSTYNILID 385
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+L +AG++ A E+ + M+K G+ PNV T N M+ C + + A + ++M+ +C P
Sbjct: 386 MLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAIFEQMDYKVCTP 445
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE------ 493
D T+ L+ + R+ + M +D ++ Y SL++ G+ E
Sbjct: 446 DEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIY 505
Query: 494 ------------------LACSF-----------FEEMISKGIVPYHSTYKMLEEKLEKK 524
+ C F FEE+ S+ VP +Y +L L K
Sbjct: 506 KDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKA 565
Query: 525 RLGN 528
N
Sbjct: 566 GFAN 569
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 101/396 (25%), Positives = 170/396 (42%), Gaps = 36/396 (9%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YN +D GK K + W+ E+ E N T ++++ L + R D+AVE F
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEI-EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 223 MKK----------------YG-VEKDTRALSVLMDTLVKGN------------------S 247
++K YG K A S+L KG+
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 248 VEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
V+ A +VF E K + +NILI C+ K+D A + M + G P+V +
Sbjct: 359 VDEALRVFEEMKKDAAPNLSTYNILIDMLCRAGKLDCAFELRDSMQKAGLFPNVRTVNIM 418
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
++ C+ + + ++M K C P IT+ ++ LGK ++++A K+YEKM DC
Sbjct: 419 VDRLCKSQKLDEACAIFEQMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDC 478
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
++ Y+SLI GR +D ++I++DM Q P++ NT + E E
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+ ++++ PD +Y+ L+ + L M + +D Y ++ G
Sbjct: 539 MFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ GK+ A EEM +KG P TY + + L K
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 155/329 (47%), Gaps = 3/329 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L ++T M + + G + F +K D R+ S+L+ L+K Y++F
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 257 EFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
K+ C+ L ++ +NI+I G+CK KV+ A + ++EM +GF P VV+Y I+ +
Sbjct: 577 SMKEQGCV-LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ +E + K + +V+ Y+ ++ GK +I+EA + E++ P+ +
Sbjct: 636 DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNVYTW 695
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+SL+ L KA + +A F+ MK+ PN +TY +I+ C + A Q+M++
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
KP +Y ++ + + L N D+ Y +++ GL +
Sbjct: 756 QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMD 815
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
A S FEE +G+ ++ T +L + L K
Sbjct: 816 AFSLFEETRRRGLHIHNKTCVVLLDTLHK 844
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 170/368 (46%), Gaps = 12/368 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++D+L ++ K +EL M + + ++ T++ ++ RL + + D+A F M
Sbjct: 380 YNILIDMLCRAGKLDCAFELRDSMQKAGL-FPNVRTVNIMVDRLCKSQKLDEACAIFEQM 438
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDC----IPLSSQIFNILIHGWC 277
D L+D L K V+ AYK++ + DC I +S I N HG
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKIYEKMLDSDCRTNSIVYTSLIKNFFNHG-- 496
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ +D K K+M Q SPD+ +++ + + K +E++ + P
Sbjct: 497 ---RKEDGHKIYKDMVNQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKSRRFVPDAR 553
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
+Y+I++H L KA NE +++ MK C+ DT Y+ +I K G+V A ++ E+M
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
K +G P V+TY ++I + A L ++ + + + Y+ L+ + R+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+L + + ++ + T+ SL+ L+++ ++ A F+ M P TY +L
Sbjct: 674 DEAYLILEELMQKGLTPNVYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 518 EEKLEKKR 525
L K R
Sbjct: 734 INGLCKVR 741
>gi|255577256|ref|XP_002529510.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531026|gb|EEF32879.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 804
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 136/572 (23%), Positives = 244/572 (42%), Gaps = 88/572 (15%)
Query: 29 SCNPLCTTAESPSSTESPSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSRV 88
S NP+ ES SPS+ ++I ++P + W R R+ S V
Sbjct: 42 SVNPIEPALESKVPFLSPSIVTYI----IKNPPNSLLGFRFFIWASKFR-----RLRSWV 92
Query: 89 LSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFS--NDLTPAFG 146
+H +D + K ++ +V++ +K CG S+S ++ ++ + + A
Sbjct: 93 ---SHNMIIDMLIK--DNGFELYWQVLKEIKRCGFSISADAFTVLIQAYAKMDMIEKAVE 147
Query: 147 FFTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIM 204
F K + P++ YNT++ V+ + + L + M +LN ++AT S ++
Sbjct: 148 SFEMMKD---FDCKPDVFTYNTVLHVMVRKEVVLLALGIYNRMLKLN-CLPNIATFSILI 203
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CI 262
+ + G+ +A++ F M + + + ++++ L + + AY++F+ KD CI
Sbjct: 204 DGMCKSGKTQNALQMFDEMTQRRILPNKITYTIIISGLCQAQKADVAYRLFIAMKDHGCI 263
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P S +N L+HG+CK +VD+A +K + + D Y+C I+ R + F
Sbjct: 264 P-DSVTYNALLHGFCKLGRVDEALGLLKYFEKDRYVLDKQGYSCLIDGLFRARRFEDAQV 322
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL----- 377
++M E KP VI YTI+M L KA + +AL++ +M +PDT Y++L
Sbjct: 323 WYRKMTEHNIKPDVILYTIMMKGLSKAGKFKDALRLLNEMTERGLVPDTHCYNALIKGYC 382
Query: 378 ----------------------------IFI--LSKAGRVKDANEIFEDMKKQGVVPNVL 407
I I + ++G V DA +IF +M+K G P+V+
Sbjct: 383 DLGLLDEAKSLHLEISKNDCFSSACTYTILICGMCRSGLVGDAQQIFNEMEKHGCYPSVV 442
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKP-------------DCETYAPLLKMCCRK 454
T+N +I C E A L KME D + +++ C
Sbjct: 443 TFNALIDGFCKAGNIEKAQLLFYKMEIGRNPSLFLRLSQGANRVLDTASLQTMVEQLCDS 502
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ +L + + + + TY L+ G ++G + A F+E+ KG+ P TY
Sbjct: 503 GLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGAFKLFKELQLKGLSPDSVTY 562
Query: 515 KMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
L IN LL+ +E+ F
Sbjct: 563 GTL---------------INGLLSANREEDAF 579
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 170/394 (43%), Gaps = 55/394 (13%)
Query: 157 YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
Y+ + Y+ ++D L ++++F ++M E +N + + +M+ L + G++ DA
Sbjct: 297 YVLDKQGYSCLIDGLFRARRFEDAQVWYRKMTE-HNIKPDVILYTIMMKGLSKAGKFKDA 355
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIH 274
+ M + G+ DT + L+ ++ A + LE DC S+ + ILI
Sbjct: 356 LRLLNEMTERGLVPDTHCYNALIKGYCDLGLLDEAKSLHLEISKNDCFS-SACTYTILIC 414
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK--------------- 319
G C++ V DAQ+ EM + G P VV++ I+ +C+ + K
Sbjct: 415 GMCRSGLVGDAQQIFNEMEKHGCYPSVVTFNALIDGFCKAGNIEKAQLLFYKMEIGRNPS 474
Query: 320 -----------VDDT----------------------LKEMQEKGCKPSVITYTIVMHAL 346
V DT L ++ + G P++ITY I++H
Sbjct: 475 LFLRLSQGANRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGF 534
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
KA IN A K++++++ PD+ Y +LI L A R +DA + + + K G P
Sbjct: 535 CKAGNINGAFKLFKELQLKGLSPDSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPIT 594
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
Y + ++ +C R++ A L K + D E + + + + + + LL
Sbjct: 595 EVYKSFMTWSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEM 654
Query: 467 MFK-NDVSMDAGTYASLVRGLIESGKLELACSFF 499
FK ND + Y + GL ++G+LE A F
Sbjct: 655 DFKLNDFQL--APYTIWLIGLCQAGRLEEALKIF 686
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 60/279 (21%), Positives = 114/279 (40%), Gaps = 38/279 (13%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
N + A++ T++ +L G A + G + ++L+ K ++ A
Sbjct: 484 NRVLDTASLQTMVEQLCDSGLILKAYNILMQLTDSGFAPNIITYNILIHGFCKAGNINGA 543
Query: 252 YKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
+K+F L+ K P S + LI+G + +DA + ++ + G +P Y F+
Sbjct: 544 FKLFKELQLKGLSP-DSVTYGTLINGLLSANREEDAFTVLDQILKNGCTPITEVYKSFMT 602
Query: 310 HYCR-----------------------------EKDFRK--VDDTLKEMQEKGCKPS--- 335
CR E++F K V++ ++ + E K +
Sbjct: 603 WSCRRNKITLAFSLWLKYLRSIPGRDSEVLKSVEENFEKGEVEEAVRGLLEMDFKLNDFQ 662
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ YTI + L +A ++ EALK++ ++ + L LI+ L K G + A EIF
Sbjct: 663 LAPYTIWLIGLCQAGRLEEALKIFFTLEEHNVLVTPPSCVKLIYRLLKVGNLDLAAEIFL 722
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEEN-ALKLLQKME 433
+G + N ++ S ++ N A LL +M+
Sbjct: 723 YTIDKGYMLMPRICNRLLKSLLRSEDKRNRAFDLLSRMK 761
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 181/400 (45%), Gaps = 20/400 (5%)
Query: 145 FGFFTW--AKTQTGYMHTPEMYNTMVD-----------------VLGKSKKFCLMWELVK 185
F FFTW + + + HT Y TM+ V+ + K
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVFAA 60
Query: 186 EMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
++ N + S ++ + G DA+E +R +++ + +++ L+K
Sbjct: 61 VLETKGNQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 246 NSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+ + + E +C P S FNIL+H +CK + AQ + + G P VVSY
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ Y R D + M G +P V TY+++++ L K +++ A ++++M
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLV 240
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
+P+ +++LI K GRV A EI++ M Q ++P+++TYNT+I C + + +
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A L+ +M KPD TY L+ CC++ + M + ++ +D Y +L+
Sbjct: 301 AHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
GL + G+ A EM+S G+ P TY M+ + KK
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKK 400
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 127/255 (49%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K + ++ A +F
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLF 235
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K +P + F LI G CK +VD A + K+M Q PD+++Y I C+
Sbjct: 236 DEMLVKGLVP-NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK 294
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ D + EM KG KP TYT ++ K ++ A + ++M ++ D
Sbjct: 295 KGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 354
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P+ TY +++ C + + KLL++M+
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQ 414
Query: 434 EDLCKPDCETYAPLL 448
D P TY L+
Sbjct: 415 RDGHAPSVVTYNVLM 429
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 146/317 (46%), Gaps = 4/317 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W +E+ L GY SL + +M R + G A F + K+G+
Sbjct: 117 LMKLKYFKLVWGFYEEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLR 174
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKV-FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
+ + LM+ ++ ++ +++ + +++LI+G CK K+D A
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGL 234
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
EM +G P+ V++T I+ +C+ + K+M + P +ITY +++ L K
Sbjct: 235 FDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK 294
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
+ +A + ++M PD Y++LI K G + A E + M ++ + + +
Sbjct: 295 KGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 354
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y +IS C +A K+L++M KPD TY ++ C+K + + LL M
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQ 414
Query: 469 KNDVSMDAGTYASLVRG 485
++ + TY L+ G
Sbjct: 415 RDGHAPSVVTYNVLMNG 431
>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 538
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 191/399 (47%), Gaps = 24/399 (6%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE 189
V+ L + D +F FF WAKT+ H+ E + ++ L K++KF +++ D
Sbjct: 84 VKNVLLKIQKDYLLSFEFFNWAKTRNPASHSLETHAIVLHTLTKNRKFKSAESILR--DV 141
Query: 190 LNNGYVSLAT-------------------MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
L NG V L ++ + ++ +A + F MK YG
Sbjct: 142 LVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLP 201
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ + M +L+ V+ A + + E + C I ++ N+++ G+C++ K+D + +
Sbjct: 202 TVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNTYTLNMVMSGYCRSGKLDKGIELL 261
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GCKPSVITYTIVMHALGK 348
++M + GF VSY I +C EK LK M K G +P+V+T+ ++H +
Sbjct: 262 QDMERLGFRATHVSYNTLIAGHC-EKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCR 320
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
A ++ EA KV+ +MK+ + P+T Y++LI S+ G + A +EDM G+ ++LT
Sbjct: 321 AVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YNT+I C +++ A + +++++++ P+ T++ L+ C ++ L M
Sbjct: 381 YNTLILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRRNADRGFELYKSMI 440
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
++ + T+ L+ ++ + A EM+ + I
Sbjct: 441 RSGCHPNEQTFNILISAFCKNEDFDGAAQVLREMVRRSI 479
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 100/247 (40%), Gaps = 17/247 (6%)
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
I++H K RK A+ ++++ G D+ + + D L +E
Sbjct: 120 IVLHTLTKNRKFKSAESILRDVLVNG-GVDLPA--------------KVFDALLYSYREC 164
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
P V + + K+ A + +MK LP ++ + L GRV A
Sbjct: 165 DSTPRV--FDSLFKTFAHLKKFRNATDTFMQMKDYGFLPTVESCNAYMSSLLGQGRVDIA 222
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ +M++ + PN T N ++S C + + ++LLQ ME + +Y L+
Sbjct: 223 LRFYREMRRCKISPNTYTLNMVMSGYCRSGKLDKGIELLQDMERLGFRATHVSYNTLIAG 282
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C K + L M KN + + T+ +L+ G + KL+ A F EM + + P
Sbjct: 283 HCEKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPN 342
Query: 511 HSTYKML 517
TY L
Sbjct: 343 TVTYNTL 349
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 155/322 (48%), Gaps = 5/322 (1%)
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
M+ +++ L R G +A+ R M + V D + + L++ L K ++ A + LE +
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 260 --DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C P +S L+ G CK ++D+A + ++ M ++GF DVV Y I +C +
Sbjct: 61 AAGCFP-NSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNL 119
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + EM KG +V+TY+ ++H L + Q EA V M PD Y+ L
Sbjct: 120 DRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 179
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L K GR A ++ M ++G P+ +TYN ++S C +A K+L+ M E
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 239
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG--TYASLVRGLIESGKLELA 495
K D TY L+K C K ++ L MF N+ ++ T+ L+ GL + G+L A
Sbjct: 240 KADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKA 299
Query: 496 CSFFEEMISKGIVPYHSTYKML 517
+M+ KG TY ML
Sbjct: 300 VKIHRKMVKKGSCGNLVTYNML 321
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 176/386 (45%), Gaps = 38/386 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ L K+KK L+ EM E + + T +T+M L + GR D+A+E M
Sbjct: 36 YNTLINGLCKAKKLKEAVGLLLEM-EAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAM 94
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVD 283
KK G + D ++ LI G+C +D
Sbjct: 95 KKKGFDADV----------------------------------VLYGTLISGFCNNGNLD 120
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
++ EM +G S +VV+Y+C + CR +++ + L M E G P V+TYT ++
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
L K + A+ + M P Y+ L+ L K G V DA +I M ++G
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKM--EEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+V+TYNT++ C + + + ALKL M E+ +P+ T+ L+ C++ R+
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ M K + TY L+ G +++GK++ A +++++ G VP TY +L +
Sbjct: 301 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360
Query: 522 EKKRLGN-AKERINKLLAHAKEQKTF 546
K R+ N AK ++ H F
Sbjct: 361 CKMRMLNIAKGLFCEMRTHGLNPALF 386
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 188/428 (43%), Gaps = 49/428 (11%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVR 209
A + G+ +Y T++ + EL EM L G ++ T S ++ L R
Sbjct: 93 AMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM--LGKGISANVVTYSCLVHGLCR 150
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQI 268
G++ +A M ++G+ D + L+D L K HA + L + S+
Sbjct: 151 LGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVT 210
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N+L+ G CK V DA K ++ M ++G DVV+Y ++ C D KVD+ LK
Sbjct: 211 YNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLC---DKGKVDEALKLFN 267
Query: 329 -----EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
E +P+V T+ +++ L K ++ +A+K++ KM + Y+ L+ K
Sbjct: 268 SMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLK 327
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTY---------------------------------- 409
AG++K+A E+++ + G VPN TY
Sbjct: 328 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD 387
Query: 410 -NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
NT+++S C E A L Q+M C+PD ++ ++ + + + L M
Sbjct: 388 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 447
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGN 528
+ + DA T+++L+ L + G+L+ A S E M++ G P Y L + L K G+
Sbjct: 448 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSK--GD 505
Query: 529 AKERINKL 536
E IN L
Sbjct: 506 TTEIINLL 513
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 123/256 (48%), Gaps = 4/256 (1%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
NI++ G C+ V +A ++EM ++ SPD+VSY I C+ K ++ L EM+
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
GC P+ +T T +M L K +++EA+++ E MK D Y +LI G +
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
E+F++M +G+ NV+TY+ ++ C + + A +L M E PD TY L+
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG-- 506
C+ R LL M + TY L+ GL + G + A MI KG
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240
Query: 507 --IVPYHSTYKMLEEK 520
+V Y++ K L +K
Sbjct: 241 ADVVTYNTLMKGLCDK 256
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 162/348 (46%), Gaps = 4/348 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y ++D L K + +L+ M E S T + ++ L + G DA + R M
Sbjct: 176 YTGLIDGLCKDGRATHAMDLLNLMVE-KGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMM 234
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKTR 280
+ G + D + LM L V+ A K+F + ++C+ + FN+LI G CK
Sbjct: 235 IEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEG 294
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ A K ++M ++G ++V+Y + + ++ + K++ + G P+ TY+
Sbjct: 295 RLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYS 354
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I++ K + +N A ++ +M++ P Y++L+ L K G ++ A +F++M
Sbjct: 355 ILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNA 414
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
P+++++NTMI + + +L KM E +PD T++ L+ + +
Sbjct: 415 NCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEA 474
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
L M + + DA Y SL++GL G + +M +KG V
Sbjct: 475 KSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTV 522
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%)
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
++ CR + ++EM K P +++Y +++ L KAK++ EA+ + +M++ C
Sbjct: 5 LKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGC 64
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P++ ++L+ L K GR+ +A E+ E MKK+G +V+ Y T+IS C + +
Sbjct: 65 FPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKE 124
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L +M + TY+ L+ CR + K N +L M ++ + D TY L+ GL
Sbjct: 125 LFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLC 184
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
+ G+ A M+ KG P + TY +L L K+ L
Sbjct: 185 KDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGL 223
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 162/346 (46%), Gaps = 12/346 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++ L K +++++ M E + T +T+M+ L G+ D+A++ F M
Sbjct: 211 YNVLLSGLCKEGLVIDAFKILRMMIE-KGKKADVVTYNTLMKGLCDKGKVDEALKLFNSM 269
Query: 224 --KKYGVEKDTRALSVLMDTLVKGNSVEHAYKV---FLEFKDCIPLSSQIFNILIHGWCK 278
+ +E + ++L+ L K + A K+ ++ C L + +N+L+ G K
Sbjct: 270 FDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVT--YNMLLGGCLK 327
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
K+ +A + K++ GF P+ +Y+ I+ +C+ + EM+ G P++
Sbjct: 328 AGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFD 387
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y +M +L K + +A ++++M + +C PD ++++I KAG + E+ M
Sbjct: 388 YNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMV 447
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ G+ P+ LT++T+I+ E + A L++M PD Y LLK K
Sbjct: 448 EMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTT 507
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK----LELACSFFE 500
+ LL M +D ++++ L S + +EL +FF+
Sbjct: 508 EIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELLPTFFQ 553
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 93/203 (45%), Gaps = 1/203 (0%)
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
IV+ L + + EA+ + +M PD Y++LI L KA ++K+A + +M+
Sbjct: 3 IVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAA 62
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G PN +T T++ C + A++LL+ M++ D Y L+ C +
Sbjct: 63 GCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRG 122
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L M +S + TY+ LV GL G+ + A + M GI P TY L +
Sbjct: 123 KELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDG 182
Query: 521 LEK-KRLGNAKERINKLLAHAKE 542
L K R +A + +N ++ +E
Sbjct: 183 LCKDGRATHAMDLLNLMVEKGEE 205
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 159/319 (49%), Gaps = 1/319 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L T ++++ R +DA+ F + G + + L+ L K + HA ++F
Sbjct: 152 LVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFN 211
Query: 257 EFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ D I + +N L+ G C+ + DA +++M ++G P+V+++T I+ + +
Sbjct: 212 QMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVG 271
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ + K M + P V TYT +++ L +++EA +++ M+S+ P+ Y+
Sbjct: 272 KIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYT 331
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI K+ RV+D +IF +M ++G+V N +TY +I C + A ++ +M
Sbjct: 332 TLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSR 391
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
PD TY LL C ++ + +M K ++ ++ TY +++G+ + GK+E A
Sbjct: 392 RAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDA 451
Query: 496 CSFFEEMISKGIVPYHSTY 514
F + SKG+ P TY
Sbjct: 452 FDLFCSLFSKGMKPNVITY 470
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 153/328 (46%), Gaps = 3/328 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + ++ + + R+D + F M+ G+ +++M+ + + + A F
Sbjct: 81 SIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRA-SCF 139
Query: 256 LE--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
L K F L+HG+C +++DA ++ GF P+VV+YT I C+
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + +M + G +P+V+TY ++ L + + ++A + M P+
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+++LI K G++ +A E+++ M + V P+V TY +I+ C + A ++ ME
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLME 319
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+ P+ TY L+ C+ KR++ + M + + + TY L++G G+ +
Sbjct: 320 SNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPD 379
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKL 521
+A F +M S+ P TY +L + L
Sbjct: 380 VAQEVFNQMGSRRAPPDIRTYNVLLDGL 407
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 142/302 (47%), Gaps = 6/302 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ Y T++ L K++ E+ +M + N ++ T ++++ L GR+ D
Sbjct: 182 GFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGD-NGIRPNVVTYNSLVSGLCEIGRWSD 240
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA---YKVFLEFKDCIPLSSQIFNIL 272
A R M K G++ + + L+D VK + A YKV ++ + + L
Sbjct: 241 AAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMS--VYPDVFTYTAL 298
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I+G C ++D+A++ M G+ P+ V+YT I +C+ K EM +KG
Sbjct: 299 INGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGL 358
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+ ITYT+++ + + A +V+ +M S PD Y+ L+ L G V+ A
Sbjct: 359 VANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALM 418
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
IF+ M+K+ + N++TY +I C + E+A L + KP+ TY ++ C
Sbjct: 419 IFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 478
Query: 453 RK 454
R+
Sbjct: 479 RR 480
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 142/319 (44%), Gaps = 1/319 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKV 254
++ T +T++ L + + AVE F M G+ + + L+ L + G + A+ +
Sbjct: 186 NVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLL 245
Query: 255 FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
K I + F LI + K K+ +A++ K M Q PDV +YT I C
Sbjct: 246 RDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTY 305
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ M+ G P+ +TYT ++H K+K++ + K++ +M + +T Y
Sbjct: 306 GRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITY 365
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ LI GR A E+F M + P++ TYN ++ C E AL + + M +
Sbjct: 366 TVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRK 425
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+ TY +++ C+ +++ L +F + + TY +++ G G +
Sbjct: 426 REMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHE 485
Query: 495 ACSFFEEMISKGIVPYHST 513
A + F++M G +P S
Sbjct: 486 ADALFKKMKEDGFLPNESV 504
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 107/234 (45%), Gaps = 1/234 (0%)
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P +V +T + + K F V ++MQ G P + T IVM+ + ++ Q A
Sbjct: 80 PSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCF 139
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
KM PD ++SL+ R++DA +F+ + G PNV+TY T+I C
Sbjct: 140 LGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCK 199
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+A+++ +M ++ +P+ TY L+ C R +LL M K + + T
Sbjct: 200 NRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVIT 259
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
+ +L+ ++ GK+ A ++ MI + P TY L L RL A++
Sbjct: 260 FTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQ 313
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 99/216 (45%), Gaps = 1/216 (0%)
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
F + D M PS++ +T ++ + K K+ + + ++E+M+ P +
Sbjct: 63 FNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNI 122
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
++ + ++ + A+ M K G P+++T+ +++ C + E+AL L ++
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG 182
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+P+ TY L+ C+ + + + M N + + TY SLV GL E G+ A
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAA 242
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKE 531
+M+ +GI P T+ L + K ++ AKE
Sbjct: 243 WLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKE 278
>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
Length = 974
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 172/365 (47%), Gaps = 4/365 (1%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
+G + + Y ++++ + K +EL+ EM + N +S T T+++ + G D
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYGTVVKGMCSSGDLD 434
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NIL 272
A + M G + + L+ T ++ + A +V E K+ ++ IF N L
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSL 493
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I G K +++D+A+ + EM + G P+ +Y FI Y +F D +KEM+E G
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P+ + T +++ K ++ EA Y M L D Y+ L+ L K +V DA E
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
IF +M+ +G+ P+V +Y +I+ + A + +M E+ P+ Y LL C
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
R ++ LL M + +A TY +++ G +SG L A F+EM KG+VP
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 513 TYKML 517
Y L
Sbjct: 734 VYTTL 738
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 176/385 (45%), Gaps = 25/385 (6%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
N L P FT+ +GY+ E + K+ VKEM E G +
Sbjct: 516 NGLKP--NAFTYGAFISGYIEASE--------FASADKY------VKEMREC--GVLPNK 557
Query: 199 TMST-IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
+ T ++ + G+ +A A+R M G+ D + +VLM+ L K + V+ A ++F E
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 258 FKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ I + +LI+G+ K + A EM ++G +P+V+ Y + +CR +
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
K + L EM KG P+ +TY ++ K+ + EA +++++MK +PD+ Y++
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED- 435
L+ + V+ A IF K+G + +N +I+ + E ++L ++ +
Sbjct: 738 LVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 436 ---LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
KP+ TY ++ C++ ++ L M ++ TY SL+ G + G+
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 493 ELACSFFEEMISKGIVPYHSTYKML 517
F+E I+ GI P H Y ++
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVI 881
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/335 (25%), Positives = 151/335 (45%), Gaps = 2/335 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++ L + R +DA M GV D S+L+D L+KG + + A + E
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
I + +++ I K ++ A+ M G P +Y IE YCREK+
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
R+ + L EM+++ S TY V+ + + ++ A + ++M + C P+ Y++L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + R DA + ++MK+QG+ P++ YN++I + A L +M E+
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KP+ TY + + + M + V + L+ + GK+ ACS
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKE 531
+ M+ +GI+ TY +L L K ++ +A+E
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 151/341 (44%), Gaps = 24/341 (7%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L+ ++ L+R R D + ++GM + V D + +L+ + +V+ V
Sbjct: 186 LSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLF 245
Query: 257 ----EF-------------------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
EF K +PL +++LI G CK ++++DA+ + EM
Sbjct: 246 KTEKEFRTATLNVDGALKLKESMICKGLVPLK-YTYDVLIDGLCKIKRLEDAKSLLVEMD 304
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
G S D +Y+ I+ + ++ + EM G Y + + K +
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
+A +++ M + +P Y+SLI + V+ E+ +MKK+ +V + TY T++
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C+ + + A ++++M C+P+ Y L+K + R +L M + ++
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
D Y SL+ GL ++ +++ A SF EM+ G+ P TY
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 142/344 (41%), Gaps = 35/344 (10%)
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVF-----LEFKDCIPLSSQIFNILIHGWCKTRK 281
G D +L D + +E A VF LE +P S+ +L+ + +
Sbjct: 146 GKSDDGVLFGILFDGYIAKEYIEEAVFVFSSSMGLEL---VPRLSRC-KVLLDALLRWNR 201
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR--------------EKDFR----KVDDT 323
+D K M ++ DV +Y I +CR EK+FR VD
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGA 261
Query: 324 LK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
LK M KG P TY +++ L K K++ +A + +M S D YS LI
Sbjct: 262 LKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDG 321
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K A + +M G+ Y+ I E A L M P
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ 381
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
+ YA L++ CR+K ++ LL M K ++ + TY ++V+G+ SG L+ A + +
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 501 EMISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
EMI+ G P Y +++ L+ R G+A ++L KEQ
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAM----RVLKEMKEQ 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 12/311 (3%)
Query: 160 TPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP +YN ++ +S + EL+ EM + + + T TI+ + G +A
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
F MK G+ D+ + L+D + N VE A +F K S+ FN LI+
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVF 777
Query: 278 KTRKVDDAQKAMKEMFQQGFS----PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
K K + + + + F P+ V+Y I++ C+E + + +MQ
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+VITYT +++ K + E V+++ + PD YS +I K G A +
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Query: 394 FEDMKKQGVVPN-----VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+ M + V + + T ++S E E A K+++ M PD T L+
Sbjct: 898 VDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Query: 449 KMCCRKKRMKV 459
C +V
Sbjct: 958 NESCISSNQRV 968
>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
Length = 545
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 185/401 (46%), Gaps = 45/401 (11%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +D L K+++ ++L+K+MDE + T + ++ L++ GR D+A+ M
Sbjct: 45 YNVFIDGLCKAERVDDAFQLLKKMDE-KKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQM 103
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ G + +V++D L K VE A ++F++ C P + ++ LI G CK+ K
Sbjct: 104 VEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRP-DAFVYTALIKGLCKSGK 162
Query: 282 VDDAQKAMK----------------------------------------EMFQQGFSPDV 301
++A K E ++GF PD
Sbjct: 163 PEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDA 222
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
V+YT I+ C+ + + EM+ +G +P +TY ++ KAK I +A +VY +
Sbjct: 223 VTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQ 282
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M + T Y+ ++ L KAGRV +A F M+++G V V+TY+ ++ C+
Sbjct: 283 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGN 342
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
A++L ++M + C+P+ +Y +++ CR ++ F + + + D T+ +
Sbjct: 343 VSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNA 402
Query: 482 LVRGLIES-GKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ GL + + FE M+S+G P +Y +L + +
Sbjct: 403 FLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGI 443
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 137/275 (49%), Gaps = 11/275 (4%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT---LK 325
F ++I+G C+ +++D+A ++ + G PD V+Y FI+ C+ + +VDD LK
Sbjct: 10 FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAE---RVDDAFQLLK 66
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
+M EK C P+ +TYT ++ L KA +++EA+ V E+M P Y+ +I LSKAG
Sbjct: 67 KMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAG 126
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ----KMEEDLCKPDC 441
RV++A IF DM G P+ Y +I C + E A L + + PD
Sbjct: 127 RVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDV 186
Query: 442 ETYAPLLKMCCRKKR-MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ C+ R ++ + DA TY S++ GL + G++E C F
Sbjct: 187 VTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFH 246
Query: 501 EMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
EM ++G P TY L + K ++ R+ +
Sbjct: 247 EMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYR 281
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 165/342 (48%), Gaps = 40/342 (11%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRG 222
Y +++D L K+ + L V + + + G++ A T ++I+ L + GR ++ E F
Sbjct: 189 YTSLIDGLCKAGRI-LEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHE 247
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M+ G E D + L+D +K + A++V+ + + +S+ +NI++ G CK +
Sbjct: 248 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 307
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V +A M ++G VV+Y+ ++ +C E + + + M ++GC+P++++Y I
Sbjct: 308 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 367
Query: 342 VMHALGKAKQ------------------------------------INEALKVYEKMKSD 365
++ L +A + +++ ++++E M S
Sbjct: 368 IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ 427
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
P+ YS L+ + +AG ++ A EIF +M +GV P+V+ +NT+I C + A
Sbjct: 428 GTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 487
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
L++ +++E PD +Y LL R +RM+ L HM
Sbjct: 488 LEVFRELERR-SAPDAWSYWSLLDGLSRCERMEEARLLSFHM 528
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 123/239 (51%), Gaps = 7/239 (2%)
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
SPD+V++T I CREK + L+ GC+P +TY + + L KA+++++A +
Sbjct: 4 SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ +KM CLP T Y++L+ L KAGR+ +A + E M ++G P + TY +I
Sbjct: 64 LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL--THMFKNDVSM- 474
E A ++ M + C+PD Y L+K C+ + + L + K+ +
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183
Query: 475 -DAGTYASLVRGLIESGK-LELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
D TY SL+ GL ++G+ LE F +E + +G +P TY + + L K LG +E
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCK--LGRVEE 240
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 85/375 (22%), Positives = 174/375 (46%), Gaps = 11/375 (2%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL---ATMSTIMRRLVRGGRYDDAVEA 219
+Y ++ L KS K + L KE + + ++ T ++++ L + GR +A +
Sbjct: 149 VYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQV 208
Query: 220 FRG-MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWC 277
F + G D + ++D L K VE + F E ++ + + LI G+
Sbjct: 209 FDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFM 268
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K + + A + ++M Q G V+Y ++ C+ + T M+E+GC +V+
Sbjct: 269 KAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVV 328
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY+ +M ++ A++++ +M C P+ Y+ +I L +AG++ A FE +
Sbjct: 329 TYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKL 388
Query: 398 KKQGVVPNVLTYNTMISSACARSEE-ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
++ + P+V T+N + C R + + ++L + M P+ +Y+ L+ CR
Sbjct: 389 LQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGG 448
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++V + M V+ D + +L+R L +G+++ A F E+ + S + +
Sbjct: 449 LEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRSAPDAWSYWSL 508
Query: 517 LE-----EKLEKKRL 526
L+ E++E+ RL
Sbjct: 509 LDGLSRCERMEEARL 523
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 98/196 (50%), Gaps = 4/196 (2%)
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C P ++ +T+V++ L + K+++EA V E+ C PD Y+ I L KA RV DA
Sbjct: 3 CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
++ + M ++ +P +TY ++ + A+ +L++M E P +TY ++
Sbjct: 63 QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK----GI 507
+ R++ + M N DA Y +L++GL +SGK E A + ++E ++
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182
Query: 508 VPYHSTYKMLEEKLEK 523
VP TY L + L K
Sbjct: 183 VPDVVTYTSLIDGLCK 198
>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 587
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 112/461 (24%), Positives = 204/461 (44%), Gaps = 29/461 (6%)
Query: 79 NEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFS 138
E R+SS V H ++D +++ PD V+++N LV RR
Sbjct: 58 GEDRRLSSLV----HRGELDAALRVVESSLCPPD----------VALANRLVRDLCRRGR 103
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
PA G T Y+ + D + + +V M L + Y
Sbjct: 104 ----PADA--ARVVEACGSAATAVTYSALADGYCRVGRLDEARRVVDGMPVLPSAY---- 153
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FL 256
+ +M L G+ DA+ M G D ++L++ KG A ++ +
Sbjct: 154 AYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLM 213
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ C P ++ +N+++ G C+ VD A++ + + G +P+ V+Y ++
Sbjct: 214 RVEGCTP-TNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGR 272
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ V++ + EM + C PS T ++V+ +L + A+++ EKM DC + Y++
Sbjct: 273 WEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNA 332
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
++ L + G V A + +M+ G PN+ TYN ++ C E+A L+ KM +
Sbjct: 333 VVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTD 392
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C PD T+ ++ C+K + M + ++ TY+S++ GL ++GK+E +
Sbjct: 393 CLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSL 452
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKL 536
EM SKG P Y +L E L E+ +L A + ++KL
Sbjct: 453 ELLNEMGSKGFNP-EINYHLLAECLNEEDKLVEAIQMVHKL 492
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 91/360 (25%), Positives = 166/360 (46%), Gaps = 5/360 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ K + + EL+ M + + T + IM + R G D A E +
Sbjct: 190 YNILLEAACKGRGYRQAMELIDLM-RVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSL 248
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKV 282
YG +T + ++ L E ++ E F + P S +++I C+
Sbjct: 249 PSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLF 308
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A + +++M + + ++V+Y + C + L MQ GCKP++ TY I+
Sbjct: 309 QRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNIL 368
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L A++ +A + KM DCLPD ++++I L + G A E+F+ M ++G
Sbjct: 369 VKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGC 428
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN +TY+++I + E +L+LL +M P+ + LL C ++ V
Sbjct: 429 CPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYH--LLAECLNEEDKLVEAI 486
Query: 463 LLTHMFKN-DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ H ++ +S A Y +++ GL +GK + A M+S G +P STY +L + L
Sbjct: 487 QMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGL 546
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/323 (25%), Positives = 159/323 (49%), Gaps = 7/323 (2%)
Query: 157 YMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
Y TP YNT++ L + ++ + EL+ EM N S AT+S ++ L + G +
Sbjct: 251 YGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFS-ENCPPSEATLSVVISSLCQEGLFQ 309
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
A+ M K+ + + ++ L + V+ A + ++ C P + +NIL
Sbjct: 310 RAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKP-NIFTYNIL 368
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+ G C + +DA+ M +M Q PD++++ I C++ + + K+M EKGC
Sbjct: 369 VKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGC 428
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P+ +TY+ V+ L K ++ ++L++ +M S P+ + Y L L++ ++ +A +
Sbjct: 429 CPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEIN-YHLLAECLNEEDKLVEAIQ 487
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ ++ G+ P + YNT++ C + + A+ +L M D C PD TY+ L++
Sbjct: 488 MVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLA 547
Query: 453 RKKRMKVLNFLLTHMFKNDVSMD 475
+ MK LL+ + DV +D
Sbjct: 548 HEGYMKEARELLSTLSSRDVIVD 570
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 149/312 (47%), Gaps = 8/312 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEF 258
+T+++ L GR++D E M LSV++ +L + + A ++ +
Sbjct: 261 NTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSK 320
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
DC + +N ++ G C+ VD A + M G P++ +Y ++ C + +
Sbjct: 321 HDCTA-NIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWE 379
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+D + +M + C P ++T+ ++ L + +A++V+++M C P++ YSS+I
Sbjct: 380 DAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVI 439
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE--NALKLLQKMEEDL 436
L+K G+++ + E+ +M +G P + N + + C E++ A++++ K+++
Sbjct: 440 EGLAKTGKMEQSLELLNEMGSKGFNPEI---NYHLLAECLNEEDKLVEAIQMVHKLQDTG 496
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
P Y +L CR + +L++M + D TY+ L++GL G ++ A
Sbjct: 497 ISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEAR 556
Query: 497 SFFEEMISKGIV 508
+ S+ ++
Sbjct: 557 ELLSTLSSRDVI 568
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 104/214 (48%), Gaps = 4/214 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + +++ L R++DA + M + D + ++ L + A +VF +
Sbjct: 364 TYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQM 423
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K C P +S ++ +I G KT K++ + + + EM +GF+P++ +Y E E
Sbjct: 424 PEKGCCP-NSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEI-NYHLLAECLNEEDK 481
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ + ++Q+ G P + Y ++ L + + ++A+ + M SD C+PD S YS
Sbjct: 482 LVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSI 541
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
LI L+ G +K+A E+ + + V+ + L N
Sbjct: 542 LIQGLAHEGYMKEARELLSTLSSRDVIVDNLIKN 575
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 107/401 (26%), Positives = 187/401 (46%), Gaps = 43/401 (10%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVRGGR 212
G+ + + Y++++ LGK + + L+KEM+ L N Y T + +R L R G+
Sbjct: 220 GFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVY----TFTICIRVLGRAGK 275
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI- 271
++A E + M G D +VL+D L ++ A +VF + K ++ I
Sbjct: 276 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYIT 335
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF-------------- 317
L+ + R +D + EM + G PDVV++T ++ C+ +F
Sbjct: 336 LLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQG 395
Query: 318 ------------------RKVDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
++DD L+ M+ G KP+ TY + + GK+ AL
Sbjct: 396 ILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 455
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+ +EKMK+ P+ ++ ++ L+KAGR ++A +IF +K G+VP+ +TYN M+
Sbjct: 456 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 515
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
E + A+KLL +M E+ C+PD L+ + R+ + M + +
Sbjct: 516 SKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 575
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
TY +L+ GL ++GK++ A FE M+ KG P T+ L
Sbjct: 576 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 616
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 153/301 (50%), Gaps = 12/301 (3%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
TG + YN ++D GKS K ++E+ KEM + + T + ++ LV+ G
Sbjct: 815 NTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSA-HECEPNTITHNIVISGLVKAGNV 873
Query: 214 DDAVEAFRG-MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFN 270
DDA++ + M L+D L K + A ++F D C P + I+N
Sbjct: 874 DDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRP-NCAIYN 932
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEM 327
ILI+G+ K + D A K M ++G PD+ +Y+ ++ C +VD+ L +E+
Sbjct: 933 ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCM---VGRVDEGLHYFREL 989
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM-KSDDCLPDTSFYSSLIFILSKAGR 386
+E G P V+ Y ++++ LGK ++ EAL ++ +M KS PD Y+SLI L AG
Sbjct: 990 KESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGM 1049
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
V++A +I+ ++++ G+ PNV T+N +I + E+A + Q M P+ TY
Sbjct: 1050 VEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQ 1109
Query: 447 L 447
L
Sbjct: 1110 L 1110
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/391 (26%), Positives = 182/391 (46%), Gaps = 13/391 (3%)
Query: 125 VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL---GKSKKFCLMW 181
+S+S V + L F D +F +F + +HT E N M++ L GK ++ ++
Sbjct: 85 LSSSEVARVLMSFP-DTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVF 143
Query: 182 ELVKE--MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
+L+++ + N Y+ TI + L G A A R M+++G + + + L+
Sbjct: 144 DLMQKRIIKRDTNTYL------TIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLI 197
Query: 240 DTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
L+K A +V+ D S Q ++ L+ G K R ++ +KEM G
Sbjct: 198 HLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLK 257
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
P+V ++T I R + + LK M ++GC P V+TYT+++ AL A++++ A +V
Sbjct: 258 PNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEV 317
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+ KMK+ PD Y +L+ S + N+ + +M+K G VP+V+T+ ++ + C
Sbjct: 318 FAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCK 377
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
A L M + P+ TY L+ R R+ + +M V A T
Sbjct: 378 AGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYT 437
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVP 509
Y + +SG A FE+M +KGI P
Sbjct: 438 YIVFIDYYGKSGDSVSALETFEKMKTKGIAP 468
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 166/375 (44%), Gaps = 37/375 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y ++D L ++K E+ +M + T T++ R D + + M
Sbjct: 298 YTVLIDALCTARKLDCAKEVFAKM-KTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEM 356
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKV 282
+K G D ++L+D L K + A+ +D I + +N LI G + ++
Sbjct: 357 EKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRL 416
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI----- 337
DDA + M G P +Y FI++Y + D +T ++M+ KG P+++
Sbjct: 417 DDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNAS 476
Query: 338 ------------------------------TYTIVMHALGKAKQINEALKVYEKMKSDDC 367
TY ++M K +I+EA+K+ +M + C
Sbjct: 477 LYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCC 536
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
PD +SLI L KA RV +A ++F MK+ + P V+TYNT+++ + + A++
Sbjct: 537 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 596
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L + M + C P+ T+ L C+ + + +L M D TY +++ GL+
Sbjct: 597 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 656
Query: 488 ESGKLELACSFFEEM 502
++G+++ A FF +M
Sbjct: 657 KNGQVKEAMCFFHQM 671
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 152/328 (46%), Gaps = 5/328 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L T + ++ L+ + A + F +K G D + L+D K ++ ++++
Sbjct: 787 LPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYK 846
Query: 257 EFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKE-MFQQGFSPDVVSYTCFIEHYCR 313
E +C P ++ NI+I G K VDDA + M + FSP +Y I+ +
Sbjct: 847 EMSAHECEP-NTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSK 905
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + M + GC+P+ Y I+++ GKA + + A ++++M + PD
Sbjct: 906 SGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKT 965
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
YS L+ L GRV + F ++K+ G+ P+V+ YN +I+ E AL L +M+
Sbjct: 966 YSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMK 1025
Query: 434 EDL-CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ PD TY L+ ++ + + + + + T+ +L+RG SGK
Sbjct: 1026 KSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKP 1085
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEK 520
E A + ++ M++ G P TY+ L +
Sbjct: 1086 EHAYAVYQTMVTGGFSPNTGTYEQLPNR 1113
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 175/402 (43%), Gaps = 46/402 (11%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
+NT+ D L K+ + L +++ +M ++ G V + T +TI+ LV+ G+ +A+ F
Sbjct: 613 FNTLFDCLCKNDEVTLALKMLFKM--MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQ 670
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIF------------ 269
MKK V D L L+ +VK +E AYK+ F C + +F
Sbjct: 671 MKKL-VYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEA 729
Query: 270 ----------NILIHGWCK------------TRKVDDAQKAMKEMFQQ-----GFSPDVV 302
++ +G C+ + K ++A A + +F++ G P +
Sbjct: 730 GIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGA-RMLFEKFTKDLGVQPKLP 788
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+Y I D +++ GC P V TY ++ A GK+ +I+E ++Y++M
Sbjct: 789 TYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEM 848
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED-MKKQGVVPNVLTYNTMISSACARSE 421
+ +C P+T ++ +I L KAG V DA +++ D M + P TY +I
Sbjct: 849 SAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGR 908
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
A +L + M + C+P+C Y L+ + L M K V D TY+
Sbjct: 909 LYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSV 968
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
LV L G+++ +F E+ G+ P Y ++ L K
Sbjct: 969 LVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGK 1010
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 101/430 (23%), Positives = 179/430 (41%), Gaps = 40/430 (9%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G T Y +D GKS E ++M + ++ + + L + GR +
Sbjct: 430 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKM-KTKGIAPNIVACNASLYSLAKAGRDRE 488
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIH 274
A + F G+K G+ D+ +++M K ++ A K+ E ++C + N LI+
Sbjct: 489 AKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLIN 548
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
K +VD+A K M + P VV+Y + + ++ + + M +KGC P
Sbjct: 549 TLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPP 608
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ IT+ + L K ++ ALK+ KM C+PD Y+++IF L K G+VK+A F
Sbjct: 609 NTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFF 668
Query: 395 EDMKK-------------QGVV----------------------PNVLTYNTMISSACAR 419
MKK GVV P L + ++ S A
Sbjct: 669 HQMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAE 728
Query: 420 SEEENALKLLQKM-EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN-DVSMDAG 477
+ +NA+ +++ +C+ P+++ + L K+ V
Sbjct: 729 AGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLP 788
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
TY L+ GL+E+ +E+A F ++ + G +P +TY L + K ++ E ++
Sbjct: 789 TYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEM 848
Query: 537 LAHAKEQKTF 546
AH E T
Sbjct: 849 SAHECEPNTI 858
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 124/253 (49%), Gaps = 1/253 (0%)
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A A+++M + GF + SY I + + + + + M G +PS+ TY+ +M
Sbjct: 174 APFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMV 233
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
LGK + I + + ++M++ P+ ++ I +L +AG++ +A EI + M +G P
Sbjct: 234 GLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGP 293
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
+V+TY +I + C + + A ++ KM+ KPD TY LL + + +N
Sbjct: 294 DVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFW 353
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK- 523
+ M K+ D T+ LV L ++G A + + M +GI+P TY L L +
Sbjct: 354 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRV 413
Query: 524 KRLGNAKERINKL 536
RL +A E + +
Sbjct: 414 HRLDDALEIFDNM 426
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 109/237 (45%), Gaps = 2/237 (0%)
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D +Y + + R+ L++M+E G + +Y ++H L K++ EA++VY
Sbjct: 154 DTNTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVY 213
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+M D P YSSL+ L K ++ + ++M+ G+ PNV T+ I
Sbjct: 214 RRMILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRA 273
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ A ++L++M+++ C PD TY L+ C +++ + M D TY
Sbjct: 274 GKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTY 333
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
+L+ ++ L+ F+ EM G VP T+ +L + L K GN E KL
Sbjct: 334 ITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKA--GNFGEAFAKL 388
>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g61990, mitochondrial; Flags: Precursor
gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 974
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 172/365 (47%), Gaps = 4/365 (1%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
+G + + Y ++++ + K +EL+ EM + N +S T T+++ + G D
Sbjct: 376 SGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKK-RNIVISPYTYGTVVKGMCSSGDLD 434
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NIL 272
A + M G + + L+ T ++ + A +V E K+ ++ IF N L
Sbjct: 435 GAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQ-GIAPDIFCYNSL 493
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I G K +++D+A+ + EM + G P+ +Y FI Y +F D +KEM+E G
Sbjct: 494 IIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGV 553
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P+ + T +++ K ++ EA Y M L D Y+ L+ L K +V DA E
Sbjct: 554 LPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEE 613
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
IF +M+ +G+ P+V +Y +I+ + A + +M E+ P+ Y LL C
Sbjct: 614 IFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFC 673
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
R ++ LL M + +A TY +++ G +SG L A F+EM KG+VP
Sbjct: 674 RSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 513 TYKML 517
Y L
Sbjct: 734 VYTTL 738
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 176/385 (45%), Gaps = 25/385 (6%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
N L P FT+ +GY+ E + K+ VKEM E G +
Sbjct: 516 NGLKP--NAFTYGAFISGYIEASE--------FASADKY------VKEMREC--GVLPNK 557
Query: 199 TMST-IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
+ T ++ + G+ +A A+R M G+ D + +VLM+ L K + V+ A ++F E
Sbjct: 558 VLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFRE 617
Query: 258 FKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ I + +LI+G+ K + A EM ++G +P+V+ Y + +CR +
Sbjct: 618 MRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGE 677
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
K + L EM KG P+ +TY ++ K+ + EA +++++MK +PD+ Y++
Sbjct: 678 IEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTT 737
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED- 435
L+ + V+ A IF K+G + +N +I+ + E ++L ++ +
Sbjct: 738 LVDGCCRLNDVERAITIF-GTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGS 796
Query: 436 ---LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
KP+ TY ++ C++ ++ L M ++ TY SL+ G + G+
Sbjct: 797 FDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRR 856
Query: 493 ELACSFFEEMISKGIVPYHSTYKML 517
F+E I+ GI P H Y ++
Sbjct: 857 AEMFPVFDEAIAAGIEPDHIMYSVI 881
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 145/326 (44%), Gaps = 1/326 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++ L + R +DA M GV D S+L+D L+KG + + A + E
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEM 338
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
I + +++ I K ++ A+ M G P +Y IE YCREK+
Sbjct: 339 VSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNV 398
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
R+ + L EM+++ S TY V+ + + ++ A + ++M + C P+ Y++L
Sbjct: 399 RQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTL 458
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + R DA + ++MK+QG+ P++ YN++I + A L +M E+
Sbjct: 459 IKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGL 518
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KP+ TY + + + M + V + L+ + GK+ ACS
Sbjct: 519 KPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACS 578
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
+ M+ +GI+ TY +L L K
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFK 604
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 151/341 (44%), Gaps = 24/341 (7%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L+ ++ L+R R D + ++GM + V D + +L+ + +V+ V
Sbjct: 186 LSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLF 245
Query: 257 ----EF-------------------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
EF K +PL +++LI G CK ++++DA+ + EM
Sbjct: 246 KTEKEFRTATLNVDGALKLKESMICKGLVPLK-YTYDVLIDGLCKIKRLEDAKSLLVEMD 304
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
G S D +Y+ I+ + ++ + EM G Y + + K +
Sbjct: 305 SLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVME 364
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
+A +++ M + +P Y+SLI + V+ E+ +MKK+ +V + TY T++
Sbjct: 365 KAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVV 424
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C+ + + A ++++M C+P+ Y L+K + R +L M + ++
Sbjct: 425 KGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIA 484
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
D Y SL+ GL ++ +++ A SF EM+ G+ P TY
Sbjct: 485 PDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTY 525
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 142/344 (41%), Gaps = 35/344 (10%)
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVF-----LEFKDCIPLSSQIFNILIHGWCKTRK 281
G D +L D + +E A VF LE +P S+ +L+ + +
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLEL---VPRLSRC-KVLLDALLRWNR 201
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR--------------EKDFR----KVDDT 323
+D K M ++ DV +Y I +CR EK+FR VD
Sbjct: 202 LDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGA 261
Query: 324 LK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
LK M KG P TY +++ L K K++ +A + +M S D YS LI
Sbjct: 262 LKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDG 321
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K A + +M G+ Y+ I E A L M P
Sbjct: 322 LLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQ 381
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
+ YA L++ CR+K ++ LL M K ++ + TY ++V+G+ SG L+ A + +
Sbjct: 382 AQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVK 441
Query: 501 EMISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
EMI+ G P Y +++ L+ R G+A ++L KEQ
Sbjct: 442 EMIASGCRPNVVIYTTLIKTFLQNSRFGDAM----RVLKEMKEQ 481
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 129/311 (41%), Gaps = 12/311 (3%)
Query: 160 TPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP +YN ++ +S + EL+ EM + + + T TI+ + G +A
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAF 717
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
F MK G+ D+ + L+D + N VE A +F K S+ FN LI+
Sbjct: 718 RLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVF 777
Query: 278 KTRKVDDAQKAMKEMFQQGFS----PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
K K + + + + F P+ V+Y I++ C+E + + +MQ
Sbjct: 778 KFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLM 837
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+VITYT +++ K + E V+++ + PD YS +I K G A +
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897
Query: 394 FEDMKKQGVVPN-----VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+ M + V + + T ++S E E A K+++ M PD T L+
Sbjct: 898 VDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Query: 449 KMCCRKKRMKV 459
C +V
Sbjct: 958 NESCISSNQRV 968
>gi|148906806|gb|ABR16549.1| unknown [Picea sitchensis]
Length = 524
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/415 (26%), Positives = 184/415 (44%), Gaps = 41/415 (9%)
Query: 100 ISKILSKQYQSPDK--VVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGY 157
I I+S + P + V AL G+ VS VE L+ A FF W+ +
Sbjct: 75 IEMIVSNILKKPPRMGVENALNELGLEVSIQFVEDVLKLSYGAGMEAMKFFRWSGLKLSR 134
Query: 158 MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
H+P +N +VD+LGK K F MW+ +K M N G VS+ TMS++ V+ G+ +A
Sbjct: 135 KHSPLAWNLLVDLLGKEKLFDAMWDCIKVMK--NQGIVSMETMSSVFGNYVQAGKVAEAR 192
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
F +++YG +D AL+ + + + A + F + K+ I + + +L+ G
Sbjct: 193 MTFDVIEQYGCPQDVVALNCFLSAFCRYKQSKEALEFFDKVKEKIAPDADTYALLLEGLE 252
Query: 278 KTRKVDDAQKAMKEM-FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
V A+ EM + G+ P+ S
Sbjct: 253 IEGNVSKARTTFGEMIIRHGWLPNNTS--------------------------------- 279
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
Y + L Q+ EALK MK+ CLPD F+ + + IL + K+A ++E
Sbjct: 280 -AYNAFLSTLVNGSQVEEALKFLAVMKTRKCLPDLGFFRNTLQILYQRKDTKNAYGLWEL 338
Query: 397 MKKQGVVPNVLTYNTMISSACARS--EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
MK+ G++ ++ +YNTMI C+ + + + A +LL +M PD +TY + +
Sbjct: 339 MKQSGILLDLPSYNTMIGVFCSANPIQVDFAYRLLDEMVFTGIFPDFKTYNTIFEALITA 398
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
++++ + + M KND Y ++ E+ E+A ++ MI K I P
Sbjct: 399 RKVEEASSIFREMTKNDFCPLYANYVMAIKMYFEADDPEMAVMMWKHMIQKAIFP 453
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 145 bits (365), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/401 (26%), Positives = 189/401 (47%), Gaps = 31/401 (7%)
Query: 110 SPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT----GYMHTPEMYN 165
SPD K C +S+ N LV + RRF + W Q G + +Y
Sbjct: 161 SPDS-----KAC-LSILNGLVRR--RRFDS---------VWVDYQLMISRGLVPDVHIYF 203
Query: 166 TMVDVLGKSKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+ K + +L+ EM L N Y+ + + L R + ++A + F
Sbjct: 204 VLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYI----YTIYILDLCRDNKMEEAEKMFEL 259
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
MKK+GV + S ++D K +V AY ++ E + +P + +F L+ G+CK R
Sbjct: 260 MKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLP-NVVVFGTLVDGFCKAR 318
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ A+ M + G P++ Y C I +C+ + + L EM+ P V TYT
Sbjct: 319 ELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYT 378
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ L Q+ EA ++++KMK++ P ++ Y+SLI K ++ A ++ +M
Sbjct: 379 ILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTAS 438
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
GV PN++T++T+I C + + A+ L +M PD TY L+ ++ MK
Sbjct: 439 GVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEA 498
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
L + M + + + T+A LV G + G+L +A F++E
Sbjct: 499 LRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQE 539
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 144/315 (45%), Gaps = 1/315 (0%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIF 269
G Y + M G++ + ++ + L + N +E A K+F L K + + +
Sbjct: 213 GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTY 272
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+ +I G+CKT V A KE+ P+VV + ++ +C+ ++ M +
Sbjct: 273 SAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK 332
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
G P++ Y ++H K+ + EA+ + +M+S + PD Y+ LI L +V +
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
AN +F+ MK + + P+ TYN++I C E AL L +M +P+ T++ L+
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C + +K L M + D TY +L+ + ++ A + +M+ GI P
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512
Query: 510 YHSTYKMLEEKLEKK 524
T+ L + K+
Sbjct: 513 NDHTFACLVDGFWKE 527
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 153/338 (45%), Gaps = 8/338 (2%)
Query: 183 LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
L ++++ + S+ S ++ + G +++A+ R MK D++A +++ L
Sbjct: 118 LFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSILNGL 174
Query: 243 VKG---NSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
V+ +SV Y++ + + +P I+ +L K +K + EM G P
Sbjct: 175 VRRRRFDSVWVDYQLMIS-RGLVP-DVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKP 232
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+V YT +I CR+ + + + M++ G P++ TY+ ++ K + +A +Y
Sbjct: 233 NVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLY 292
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+++ + LP+ + +L+ KA + A +F M K GV PN+ YN +I C
Sbjct: 293 KEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKS 352
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
A+ LL +ME PD TY L+ C + ++ N L M + + TY
Sbjct: 353 GNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATY 412
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
SL+ G + +E A EM + G+ P T+ L
Sbjct: 413 NSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 148/339 (43%), Gaps = 10/339 (2%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVRGGRYDDAVEA 219
++ T+VD K+++ L M + N YV + ++ + G +AV
Sbjct: 306 VFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYV----YNCLIHGHCKSGNMLEAVGL 361
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWC 277
M+ + D ++L++ L + V A ++F + K+ P SS +N LIHG+C
Sbjct: 362 LSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFP-SSATYNSLIHGYC 420
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K ++ A EM G P++++++ I+ YC +D + EM KG P V+
Sbjct: 421 KEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVV 480
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYT ++ A K + EAL++Y M P+ ++ L+ K GR+ A + +++
Sbjct: 481 TYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQEN 540
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+Q N + + +I C A + M PD +Y +LK ++KR+
Sbjct: 541 NQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRI 600
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
L M K + + L R +G ++ AC
Sbjct: 601 TDTMMLQCDMIKTGILPNLLVNQLLARFYQANGYVKSAC 639
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 145 bits (365), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 159/315 (50%), Gaps = 15/315 (4%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV----- 195
++ A+G F+ + G YNT++ FC++ +L + + LN +
Sbjct: 215 VSEAYGLFSEMAVK-GISADVVTYNTLI------YGFCIVGKLKEAIGLLNEMVLKTINP 267
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + ++ L + G+ +A M K V+ D S LMD V+ A VF
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ P + ILI+G+CK + VD+A KEM Q+ P +V+Y+ I+ C+
Sbjct: 328 NAMSLMGVTP-DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
V D + EM+++G VITY+ ++ L K ++ A+ ++ KMK + P+
Sbjct: 387 SGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
++ L+ L K GR+KDA E+F+D+ +G NV TYN MI+ C + E AL +L KME
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506
Query: 434 EDLCKPDCETYAPLL 448
++ C P+ T+ ++
Sbjct: 507 DNGCIPNAFTFETII 521
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 124/547 (22%), Positives = 236/547 (43%), Gaps = 72/547 (13%)
Query: 47 SLPSWIKFFDSQSPDEDFVIPSLAGWVE----SHRLNEKSRISS---------RVLSENH 93
SLP+ ++F S S IP+ + +++ SH ++ I + R+L H
Sbjct: 2 SLPTRLRFSVSLS------IPNFSSFLQNSSHSHFHSQPPSIQNVDDAVSQFNRMLCMRH 55
Query: 94 ETDVDKISKILS-----KQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFF 148
+ + +KIL K Y + + L+ G+ + + F + FGF
Sbjct: 56 TPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFS 115
Query: 149 TWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD----ELNNGY-VSLATMST 202
AK + GY NT++ K CL ++ K + L G+ ++ + +T
Sbjct: 116 VLAKILKRGYPPDTVTLNTLI------KGLCLKGQVKKALHFHDKLLAQGFQLNQVSYAT 169
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE----- 257
++ + + G A++ R + + D + ++D + K V AY +F E
Sbjct: 170 LINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKG 229
Query: 258 --------------------FKDCIPLSSQI-----------FNILIHGWCKTRKVDDAQ 286
K+ I L +++ +NIL+ CK KV +A+
Sbjct: 230 ISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAK 289
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
+ M + PDV++Y+ ++ Y + +K M G P V TYTI+++
Sbjct: 290 SVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349
Query: 347 GKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNV 406
K K ++EAL ++++M + +P YSSLI L K+GR+ ++ ++M+ +G +V
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADV 409
Query: 407 LTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTH 466
+TY+++I C + A+ L KM++ +P+ T+ LL C+ R+K +
Sbjct: 410 ITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQD 469
Query: 467 MFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
+ ++ TY ++ G + G LE A + +M G +P T++ + L KK
Sbjct: 470 LLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDE 529
Query: 527 GNAKERI 533
+ E++
Sbjct: 530 NDKAEKL 536
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 157/343 (45%), Gaps = 2/343 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T++T+++ L G+ A+ + G + + + + L++ + K A K +
Sbjct: 130 VTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRK 189
Query: 258 FKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ + +N +I CK + V +A EM +G S DVV+Y I +C
Sbjct: 190 IDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGK 249
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
++ L EM K P+V TY I++ AL K ++ EA V M PD YS+
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ VK A +F M GV P+V TY +I+ C + AL L ++M +
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
P TY+ L+ C+ R+ + L+ M D TY+SL+ GL ++G L+ A
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI 429
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLA 538
+ F +M + I P T+ +L + L K RL +A+E LL
Sbjct: 430 ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLT 472
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 5/210 (2%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++ + D+A+ F+ M + + S L+D L K + + + + E
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400
Query: 259 KD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+D P ++ LI G CK +D A +M Q P++ ++T ++ C+
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + +++ KG +V TY ++++ K + EAL + KM+ + C+P+ + ++
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETI 520
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
I L K KD N+ E + +Q + +L
Sbjct: 521 IIALFK----KDENDKAEKLLRQMIARGLL 546
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 187/400 (46%), Gaps = 20/400 (5%)
Query: 145 FGFFTW--AKTQTGYMHTPEMYNTMVDVLGKSKKFC----LMWELVKEMDELNNGYVSLA 198
F FFTW + + + + HT Y TM+ L + F L+ +V + + V A
Sbjct: 1 FSFFTWLSSPSNSTFRHTLHSYCTMIHFLCTHQMFSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 199 TMST-------------IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
+ T ++ + G DA+E +R +++ + +++ L+K
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 246 NSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+ + + E +C P S FNIL+H +CK + AQ + + G P VVSY
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ Y R D + M G +P TY+++++ L K ++++A +++++M
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLV 240
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
+P+ +++LI K GRV A EI++ M Q ++P+++TYNT+I C + + +
Sbjct: 241 KGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A L+ +M KPD TY L+ CC++ + M + ++ +D Y +L+
Sbjct: 301 ANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
GL + G+ A EM+S G+ P TY M+ + KK
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKK 400
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 129/255 (50%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K + ++ A ++F
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELF 235
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K +P + F LI G CK +VD A + K M Q PD+++Y I C+
Sbjct: 236 DEMLVKGLVP-NGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCK 294
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ +D + EM KG KP ITYT ++ K ++ A + ++M ++ D
Sbjct: 295 KGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 354
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P+ TY +I+ C + + +LL++M+
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQ 414
Query: 434 EDLCKPDCETYAPLL 448
+ P TY L+
Sbjct: 415 RNGHVPSVVTYNVLM 429
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/317 (25%), Positives = 147/317 (46%), Gaps = 4/317 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W +E+ L GY SL + +M R + G A F + K+G+
Sbjct: 117 LMKLKYFKLVWGFYEEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLR 174
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKV-FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
+ + LM+ ++ ++ +++ + +++LI+G CK K+DDA +
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANEL 234
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
EM +G P+ V++T I+ +C++ + K M + P +ITY +++ L K
Sbjct: 235 FDEMLVKGLVPNGVTFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCK 294
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
+ +A + ++M PD Y++LI K G + A E + M ++ + + +
Sbjct: 295 KGDLKQANDLIDEMVMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 354
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y +IS C +A K+L++M KPD TY ++ C+K + + LL M
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQ 414
Query: 469 KNDVSMDAGTYASLVRG 485
+N TY L+ G
Sbjct: 415 RNGHVPSVVTYNVLMNG 431
>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 174/387 (44%), Gaps = 45/387 (11%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-------SLATMSTIMRRLVRGGRYDDA 216
Y T++ L ++ + +L +EM LN+ + + + S I+ L + R D+A
Sbjct: 204 YGTLMKGLCRTGNISIALKLHQEM--LNDSSLYGINFKPVVISYSIIIDALCKDRREDEA 261
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHG 275
+ F MK G+ + + L+ G E A ++F E + + + FN+LI
Sbjct: 262 RDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDV 321
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
CK KV +A+ ++ M Q+G P++++Y IE +C D + M KGC+P
Sbjct: 322 LCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPD 381
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
VI YT++++ K ++ EA+K+Y M PD Y +L+ L + G+V DA ++F
Sbjct: 382 VICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFG 441
Query: 396 DMKKQGVVPNVLTY-----------------------------------NTMISSACARS 420
MK G+ ++ Y N +I C
Sbjct: 442 VMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAG 501
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+ E A +L +K+ ++ +PD TY ++ CR ++ N L M KN + D TYA
Sbjct: 502 KLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNGCTPDKITYA 561
Query: 481 SLVRGLIESGKLELACSFFEEMISKGI 507
+L+RG ES KLE M+ + +
Sbjct: 562 TLIRGFFESKKLEKVVELLHMMVQRDV 588
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 147/317 (46%), Gaps = 20/317 (6%)
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK---------DCIPLSS 266
A +AF+ T LS L ++H +VF + DC L
Sbjct: 77 ATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTL-- 134
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
NIL++ C +V + M + ++G+ PD+V+YT I+ C E K
Sbjct: 135 ---NILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTR 191
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF------YSSLIFI 380
MQ+ GC P+ ITY +M L + I+ ALK++++M +D L +F YS +I
Sbjct: 192 MQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDA 251
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K R +A ++FE+MK QG+ P V++Y ++I C + E A +L +M +P+
Sbjct: 252 LCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPN 311
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
T+ L+ + C++ ++ LL M + + + TY SL+ G G L A F
Sbjct: 312 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 371
Query: 501 EMISKGIVPYHSTYKML 517
M SKG P Y +L
Sbjct: 372 SMPSKGCEPDVICYTVL 388
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 117/445 (26%), Positives = 189/445 (42%), Gaps = 63/445 (14%)
Query: 134 LRRFSNDLTPAFGFFTWAKTQTG----YMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE 189
L +SN TP FT + Y +YN M + G S C + L+ +
Sbjct: 86 LMMYSNP-TPPLSSFTHLLSGLAKIKHYSQVFYLYNQM-RLSGISPDCCTLNILLNCLCN 143
Query: 190 LNNGYVSLATMSTIMRR-----------LVRG----GRYDDAVEAFRGMKKYGVEKDTRA 234
+N LA M+ I+RR L++G R A F M+K G +
Sbjct: 144 VNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAIT 203
Query: 235 LSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF-------NILIHGWCKTRKVDDAQK 287
LM L + ++ A K+ E + L F +I+I CK R+ D+A+
Sbjct: 204 YGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARD 263
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+EM QG +P V+SYT I +C + + EM +G +P+V+T+ +++ L
Sbjct: 264 LFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLC 323
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
K ++ EA + E M +P+ Y+SLI G + A E+F M +G P+V+
Sbjct: 324 KEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVI 383
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL-------KMCCRKKRMKVL 460
Y +I+ C S+ E A+KL M + +PD +TY LL K+ KK V+
Sbjct: 384 CYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVM 443
Query: 461 ------------NFLLTHMFKN----------------DVSMDAGTYASLVRGLIESGKL 492
L + KN ++ +D + L+ GL ++GKL
Sbjct: 444 KVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKL 503
Query: 493 ELACSFFEEMISKGIVPYHSTYKML 517
E A FE++ + + P TY ++
Sbjct: 504 ETAWELFEKLPQEELQPDVVTYNIM 528
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 166/351 (47%), Gaps = 41/351 (11%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++D L K ++ +L +EM ++ ++ + ++++ GG++++A F M
Sbjct: 245 YSIIIDALCKDRREDEARDLFEEM-KVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEM 303
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQIFNILIHGWCKTR 280
GV+ + +VL+D L K V A K LE + +P + +N LI G+C
Sbjct: 304 VNQGVQPNVVTFNVLIDVLCKEGKVIEA-KDLLEVMIQRGIVP-NLLTYNSLIEGFCLVG 361
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ A++ M +G PDV+ YT I YC+ + M + G +P V TY
Sbjct: 362 DLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYG 421
Query: 341 IVMHAL------GKAKQINEALKVY-----------------------------EKMKSD 365
++ L G AK++ +KVY K+KS
Sbjct: 422 ALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSY 481
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
+ D ++ LI L KAG+++ A E+FE + ++ + P+V+TYN MI C + A
Sbjct: 482 NIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKA 541
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
L QKME++ C PD TYA L++ K+++ + LL M + DVS+D
Sbjct: 542 NILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 121/271 (44%), Gaps = 10/271 (3%)
Query: 263 PLS-SQIFNILIHGWCKTRKVDDAQ--KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
P+S Q ++ +H CKT + Q + M +P + S+T + + K + +
Sbjct: 56 PISFQQQLSMFLHN-CKTGNITATQAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQ 114
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
V +M+ G P T I+++ L ++ E L V + +PD Y++LI
Sbjct: 115 VFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIK 174
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC-- 437
L R+ A +F M+K G PN +TY T++ C ALKL Q+M D
Sbjct: 175 GLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLY 234
Query: 438 ----KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
KP +Y+ ++ C+ +R L M ++ +Y SL+ G GK E
Sbjct: 235 GINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWE 294
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
A F EM+++G+ P T+ +L + L K+
Sbjct: 295 EAKRLFNEMVNQGVQPNVVTFNVLIDVLCKE 325
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 187/402 (46%), Gaps = 22/402 (5%)
Query: 145 FGFFTWAKTQTGYMHTPEMYNTMVDVLGK----SKKFCLMWELVKEMDELNNGYV----- 195
F FF + ++ + HT Y+TM L S+ L ++ +M ++ +
Sbjct: 83 FSFFNYLASRPPFRHTLHNYSTMAHFLSSHNLLSQTHSLFLFIISKMGHHSSTSLISSLI 142
Query: 196 -----------SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
S+ ++ +DA++ R +KK L+ ++K
Sbjct: 143 QTVPTHHRHNHSVLVFDALIIAYTDSEFIEDAIQCLRLVKKNNFSIPVCGCDYLLRRVMK 202
Query: 245 GNSVE-HAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
N H ++ +LE D P + +FNIL+HG+CK V +A+ E+ ++G P VV
Sbjct: 203 LNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVV 262
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
S+ I YCR K+ + M+ + P V TY+ +++ L K ++ EA ++++M
Sbjct: 263 SFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEM 322
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+P+ +++LI K G++ A FE MK +G+ P+++TYN +I+ C +
Sbjct: 323 CEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGDL 382
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+ A KLL +M + KPD T+ L+ CC+ M + M + + +D + +L
Sbjct: 383 KEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFTAL 442
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ GL G++ A ++M+S G P TY M+ + KK
Sbjct: 443 ISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKK 484
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 165/350 (47%), Gaps = 3/350 (0%)
Query: 191 NNGYVSLATMSTIMRRLVR-GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE 249
NN + + ++RR+++ + E + + YG + ++LM K V
Sbjct: 184 NNFSIPVCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVM 243
Query: 250 HAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
+A VF E + + S FN LI G+C+++ V++ M + SPDV +Y+ I
Sbjct: 244 NARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALI 303
Query: 309 EHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
C+E + + EM E G P+ +T+T ++ K +I+ AL+ +E MK
Sbjct: 304 NGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIR 363
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
PD Y++LI L + G +K+A ++ +M G P+ +T+ T++ C + ++AL++
Sbjct: 364 PDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEI 423
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+M E+ + D + L+ CR R++ +L M D TY ++ +
Sbjct: 424 KDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCK 483
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLL 537
G +++ +EM G VP TY L K+ ++ NAK ++ +L
Sbjct: 484 KGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAML 533
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 154/323 (47%), Gaps = 4/323 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T++ R ++ M+ + D S L++ L K + VE A +F
Sbjct: 260 SVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLF 319
Query: 256 LEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E + + + + F LI G CK K+D A + + M +G PD+++Y I CR+
Sbjct: 320 DEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRD 379
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
D ++ L EM G KP IT+T +M K ++ AL++ ++M + D +
Sbjct: 380 GDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAF 439
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI L + GRV+DA + +DM G P+ TY +I C + + + KLL++M+
Sbjct: 440 TALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQR 499
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
D P TY L+ C++ +MK LL M +V + T+ L+ G + G
Sbjct: 500 DGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDITFNILLDGHCKHGS--- 556
Query: 495 ACSFFEEMISKGIVPYHSTYKML 517
+ F KG+V +++Y L
Sbjct: 557 SVDFKIFNGEKGLVSDYASYTAL 579
>gi|449435890|ref|XP_004135727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g16830-like [Cucumis sativus]
Length = 665
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 112/444 (25%), Positives = 191/444 (43%), Gaps = 67/444 (15%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGK-SKKFCLMW 181
V ++N LV TL S+DL A FF W Q + H P ++ MV V+ + K++ +
Sbjct: 58 VILTNDLVYTTLLNCSSDLI-ALSFFMWCAKQPNFFHNPAAFDYMVGVVSRLMKQYETVN 116
Query: 182 ELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDT 241
++ ++ + N T ++R RGG YD EAF M +YG +T A +V+MD
Sbjct: 117 GILGGLESVGN-VTKAQTFLLLLRIYWRGGMYDLVFEAFDHMDRYGFTPNTFARNVIMDV 175
Query: 242 LVKGNSVEHAYKVF--------LEF----------KDCIPLSSQI--------------F 269
L K + A KVF L F KD I + F
Sbjct: 176 LFKVGRADVALKVFKETLLPNFLTFNIVLCNLSKTKDLIGIGDTFRCMLRMGYCPNPGTF 235
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
++++G CK ++ +A + M G S V +T I+ +CR + + +K+M++
Sbjct: 236 EVVLNGLCKLGRLAEAYQVWGIMTTFGISMSVNIWTIMIDGFCRLRRTEEASSLVKKMKK 295
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
GC P+++TYT ++ A++I++A V ++S+ PD Y+ LI L+K R D
Sbjct: 296 SGCSPNIVTYTTLIKGYIYAQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYND 355
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSE---------------------------- 421
A IF + K+ ++P+ T+++++++ C
Sbjct: 356 ALSIFLSLHKRNILPDCYTFSSLLNTICLSKRLFLLPKLVDGFLVEVDLVACNSLLSYLG 415
Query: 422 ----EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
AL+L M PD + +L C +R+ L + N +DA
Sbjct: 416 KAGFAALALELYNNMVNGGLMPDKYSVLGVLTGLCESRRIGEAVRLYNGILLNYTGVDAH 475
Query: 478 TYASLVRGLIESGKLELACSFFEE 501
+ ++ GLI++GK A F
Sbjct: 476 IHTVIIDGLIKAGKFHSAIRIFRR 499
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/365 (19%), Positives = 146/365 (40%), Gaps = 9/365 (2%)
Query: 149 TWAKTQT-GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRL 207
W T G + ++ M+D + ++ LVK+M + + ++ T +T+++
Sbjct: 254 VWGIMTTFGISMSVNIWTIMIDGFCRLRRTEEASSLVKKMKK-SGCSPNIVTYTTLIKGY 312
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLS 265
+ R DA + ++ G D +VL+D+L K A +FL ++ +P
Sbjct: 313 IYAQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAKNERYNDALSIFLSLHKRNILP-D 371
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
F+ L++ C ++++ K + + D+V+ + + + +
Sbjct: 372 CYTFSSLLNTICLSKRLFLLPKLVDGFLVE---VDLVACNSLLSYLGKAGFAALALELYN 428
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
M G P + V+ L ++++I EA+++Y + + D ++ +I L KAG
Sbjct: 429 NMVNGGLMPDKYSVLGVLTGLCESRRIGEAVRLYNGILLNYTGVDAHIHTVIIDGLIKAG 488
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ A IF + +V++Y+ I A L M+E P+
Sbjct: 489 KFHSAIRIFRRNLLEENSLDVVSYSVAIRGLLLVGRNTEASNLYNYMKEAGINPNGHVCN 548
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK-LELACSFFEEMIS 504
+L C++K+ ++ +L M + M + L + S L EM
Sbjct: 549 VMLSTFCKEKKFALVKQMLQEMIDLGIKMSRNNFFRLYNAICRSSNGSHLVIYLLIEMKV 608
Query: 505 KGIVP 509
G++P
Sbjct: 609 LGLLP 613
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 98/236 (41%), Gaps = 10/236 (4%)
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
++ + Y R + V + M G P+ ++M L K + + ALKV++
Sbjct: 133 TFLLLLRIYWRGGMYDLVFEAFDHMDRYGFTPNTFARNVIMDVLFKVGRADVALKVFK-- 190
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+ LP+ ++ ++ LSK + + F M + G PN T+ +++ C
Sbjct: 191 --ETLLPNFLTFNIVLCNLSKTKDLIGIGDTFRCMLRMGYCPNPGTFEVVLNGLCKLGRL 248
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
A ++ M + ++ CR +R + + L+ M K+ S + TY +L
Sbjct: 249 AEAYQVWGIMTTFGISMSVNIWTIMIDGFCRLRRTEEASSLVKKMKKSGCSPNIVTYTTL 308
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
++G I + ++ A + S+G P Y +L + L K ER N L+
Sbjct: 309 IKGYIYAQRISDAFDVLSIIESEGPSPDLILYNVLIDSLAK------NERYNDALS 358
>gi|224072823|ref|XP_002303899.1| predicted protein [Populus trichocarpa]
gi|222841331|gb|EEE78878.1| predicted protein [Populus trichocarpa]
Length = 427
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 154/292 (52%), Gaps = 9/292 (3%)
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIH 274
AVE F M ++ + +++L+ L++ LV A ++F + ++ L+S FN++I
Sbjct: 117 AVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVAFNVMIK 176
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
GW + + + A K EM ++ P VV+Y I + CR + K L++M +KG +P
Sbjct: 177 GWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRP 236
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ IT+ ++M + NEA K+ M+ C P + L+ L K G++ +A +
Sbjct: 237 NAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVL 296
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR- 453
+MKK+ + P+V+TYN +I+ C +A ++L +M+ C+ + TY L+ CR
Sbjct: 297 HEMKKRHMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFCRV 356
Query: 454 ---KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
+ +KVLN +LT V T+ SLV GL++SG L+ AC EEM
Sbjct: 357 GDFEGGLKVLNAMLTSGHFPRVE----TFRSLVVGLVKSGNLDGACFVLEEM 404
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%)
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+A E Q+GF PD SY + R +DF V++ L+ +++K + +
Sbjct: 46 EALTLFHEYLQRGFKPDYPSYAALLYKLARCQDFGAVEEVLRYVEDKNVHCQETIFIALF 105
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
GKA+ +++A++++ +M +C+ + +SL+ +L G +ANE+F+ + G
Sbjct: 106 QHYGKAQLVHKAVELFNRMTRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFR 165
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
N + +N MI + E E A K+ +M E +P TY L+ CR + L
Sbjct: 166 LNSVAFNVMIKGWLEKGEWEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKAKGL 225
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
L M K +A T+A L+ G G+ A +M +G P + +L L K
Sbjct: 226 LEDMIKKGKRPNAITFALLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGK 285
Query: 524 K 524
+
Sbjct: 286 R 286
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 105/224 (46%), Gaps = 3/224 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD-TLVKGNSVEHAYKV 254
S+ T ++++ L R G D A M K G + ++LM+ + + G E +
Sbjct: 202 SVVTYNSLIGYLCRNGELDKAKGLLEDMIKKGKRPNAITFALLMEGSCLIGEHNEAKKMM 261
Query: 255 F-LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
F +E++ C P F +L+ K K+D+A+ + EM ++ PDVV+Y I + C+
Sbjct: 262 FDMEYRGCKPTVVN-FGVLMSDLGKRGKIDEAKSVLHEMKKRHMKPDVVTYNILINYLCK 320
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E + L EMQ GC+ + TY +++ + LKV M + P
Sbjct: 321 EGRAADAYEVLFEMQVGGCEANAATYRMLVDGFCRVGDFEGGLKVLNAMLTSGHFPRVET 380
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ SL+ L K+G + A + E+M+K+ ++ + ++ +C
Sbjct: 381 FRSLVVGLVKSGNLDGACFVLEEMEKRQMMFCADDWEALVMESC 424
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 138/306 (45%), Gaps = 10/306 (3%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
T+ + T + N++++VL + F EL + E+ S+A + +++ + G
Sbjct: 125 TRFNCVRTSQSLNSLLNVLVDNGWFLEANELFDKGYEMGFRLNSVA-FNVMIKGWLEKGE 183
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFN 270
++ A + F M + VE + L+ L + ++ A K LE K ++ F
Sbjct: 184 WEQASKVFDEMLERKVEPSVVTYNSLIGYLCRNGELDKA-KGLLEDMIKKGKRPNAITFA 242
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
+L+ G C + ++A+K M +M +G P VV++ + + + L EM+++
Sbjct: 243 LLMEGSCLIGEHNEAKKMMFDMEYRGCKPTVVNFGVLMSDLGKRGKIDEAKSVLHEMKKR 302
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
KP V+TY I+++ L K + +A +V +M+ C + + Y L+ + G +
Sbjct: 303 HMKPDVVTYNILINYLCKEGRAADAYEVLFEMQVGGCEANAATYRMLVDGFCRVGDFEGG 362
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED---LCKPDCETYAPL 447
++ M G P V T+ +++ + A +L++ME+ C D E L
Sbjct: 363 LKVLNAMLTSGHFPRVETFRSLVVGLVKSGNLDGACFVLEEMEKRQMMFCADDWEA---L 419
Query: 448 LKMCCR 453
+ CR
Sbjct: 420 VMESCR 425
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 164/321 (51%), Gaps = 3/321 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEF 258
+ ++ + + G DA F ++K G+ T + + L++ L K +++ +++ +E
Sbjct: 227 NILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEE 286
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
P +++LIHG CK ++D A++ EM Q+G P+ +++T I+ CR +
Sbjct: 287 NRIYP-DVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRID 345
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+T +M G KP ++ Y +++ L K +N+A K+ ++M+ PD Y++LI
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLI 405
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
K G ++ A EI + M ++GVV + + + +IS C +A + L++M E K
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PD TY ++ C+K +K+ LL M N TY L+ GL + G+++ A
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525
Query: 499 FEEMISKGIVPYHSTYKMLEE 519
E M++ G+ P TY +L E
Sbjct: 526 LEAMLNLGVTPDDITYNILLE 546
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 158/315 (50%), Gaps = 2/315 (0%)
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVD 283
+YG + ++L++ K S+ A +F E K + ++ FN LI+G CK+R +D
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+ + K M + PDV +Y+ I C+E + EMQ++G +P+ IT+T ++
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
++++I+ A+ Y +M + PD Y++L+ L K G V A ++ ++M+ G+
Sbjct: 336 DGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMK 395
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P+ +TY T+I C + E+A+++ + M E+ D + L+ CR R++
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
L M + + D TY ++ G + G +++ +EM G P TY +L L K
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCK 515
Query: 524 K-RLGNAKERINKLL 537
+ ++ NA + +L
Sbjct: 516 QGQMKNANMLLEAML 530
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/368 (26%), Positives = 163/368 (44%), Gaps = 38/368 (10%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G T +NT+++ L KS+ + L K M+E N Y + T S ++ L + GR D
Sbjct: 253 GLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEE-NRIYPDVFTYSVLIHGLCKEGRLDV 311
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
A + F M++ G+ + + L+D G
Sbjct: 312 AEQLFDEMQQRGLRPNGITFTALID----------------------------------G 337
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
C++R++D A +M G PD+V Y + C+ D K + EM+ G KP
Sbjct: 338 QCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPD 397
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
ITYT ++ K + A+++ + M + + D +++LI + GRV+DA
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLR 457
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M + G+ P+ TY +I C + + KLL++M+ + KP TY L+ C++
Sbjct: 458 EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQG 517
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+MK N LL M V+ D TY L+ G ++GK E E KG++ ++ Y
Sbjct: 518 QMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYT 574
Query: 516 MLEEKLEK 523
L + K
Sbjct: 575 SLVSEYNK 582
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 110/218 (50%)
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
E+ + GF P V Y I +C+E R E++++G +P+ +++ +++ L K++
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
++E ++ + M+ + PD YS LI L K GR+ A ++F++M+++G+ PN +T+
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+I C ++A+ +M KPD Y LL C+ + L+ M
Sbjct: 333 ALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMV 392
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ D TY +L+ G + G LE A + M +G+V
Sbjct: 393 GMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVV 430
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 89/192 (46%)
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
E+ E G P V Y I+++ K I +A ++ +++ P T +++LI L K+
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ + + + M++ + P+V TY+ +I C + A +L +M++ +P+ T+
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ CR +R+ M V D Y +L+ GL + G + A +EM
Sbjct: 333 ALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMV 392
Query: 506 GIVPYHSTYKML 517
G+ P TY L
Sbjct: 393 GMKPDKITYTTL 404
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/436 (23%), Positives = 198/436 (45%), Gaps = 51/436 (11%)
Query: 141 LTPAFGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA- 198
L P F F AK + GY NT + K FCL ++ + ++ ++ V+L
Sbjct: 120 LIP-FAFSVLAKILKMGYEPDTITLNTFI------KGFCLKGQIHQALN-FHDKLVALGF 171
Query: 199 -----TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+ T++ L + G A+E R + V+ D S ++D++ K +V A+
Sbjct: 172 HLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFD 231
Query: 254 VFLE-------------------------FKDCIPLSSQI-----------FNILIHGWC 277
++ E KD I L +++ FNIL+ +C
Sbjct: 232 LYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFC 291
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K +V +A+ + M +QG PD+V+Y ++ YC + L M +G +V
Sbjct: 292 KEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVR 351
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
+Y IV++ K K +++A+K++++M P+ Y+SLI L K+GR+ A E+ + M
Sbjct: 352 SYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLM 411
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+G P+++TY++++ + C + A+ LL K+++ +P+ TY L+ C+ R+
Sbjct: 412 HDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRL 471
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + + ++ TY +++G G + A S +M +P TY+++
Sbjct: 472 EDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEII 531
Query: 518 EEKLEKKRLGNAKERI 533
L K + E++
Sbjct: 532 ICSLFDKDENDKAEKL 547
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 155/349 (44%), Gaps = 14/349 (4%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---- 258
I+ LV+ Y + F+ M+ G++ + ++L++ + + A+ V +
Sbjct: 76 ILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMG 135
Query: 259 --KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
D I L N I G+C ++ A ++ GF D VSY I C+ +
Sbjct: 136 YEPDTITL-----NTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGE 190
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
R + L+ + K + V+ Y+ ++ ++ K K +N+A +Y +M S + YS+
Sbjct: 191 TRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSA 250
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI G++KDA +F M + + P+V T+N ++ + C + A L M +
Sbjct: 251 LISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG 310
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
KPD TY L+ C + + +L M V+ +Y ++ G + ++ A
Sbjct: 311 IKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAM 370
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAKEQK 544
F+EM K I P TY L + L K R+ A E I+ L H + Q+
Sbjct: 371 KLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELID--LMHDRGQQ 417
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 118/261 (45%), Gaps = 2/261 (0%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V DA + +Q +P + + + + K + V ++M+ +G KP+ + + I
Sbjct: 51 VVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNI 110
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ + I A V K+ PDT ++ I G++ A + + G
Sbjct: 111 LINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALG 170
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ ++Y T+I+ C E AL+LL++++ L + D Y+ ++ C+ K +
Sbjct: 171 FHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAF 230
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + M +S + TY++L+ G GKL+ A F +M S+ I P T+ +L +
Sbjct: 231 DLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAF 290
Query: 522 EKKRLGNAKERINKLLAHAKE 542
K+ G KE N L K+
Sbjct: 291 CKE--GRVKEAKNGLAMMMKQ 309
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 145/347 (41%), Gaps = 64/347 (18%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M GV R+ +++++ K V+ A K+F E K P + +N LI G CK+
Sbjct: 341 MSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFP-NVITYNSLIDGLCKSG 399
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ A + + M +G PD+++Y+ ++ C+ K L +++++G +P++ TYT
Sbjct: 400 RISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYT 459
Query: 341 IVMHALGKAKQI-----------------------------------NEALKVYEKMKSD 365
I++ L K ++ +EAL + KMK +
Sbjct: 460 ILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDN 519
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT-----MISSA---- 416
C+PD Y +I L A ++ +M +G++ + L Y + M + A
Sbjct: 520 SCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLN 579
Query: 417 -----CARSEEE-NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK---VLNFLLTHM 467
C S+E N KLL +E C DC L K R K ++ V+ +
Sbjct: 580 NDSLQCTSSQESGNWAKLL--LERIYC--DC----VLTKSNMRDKDVECPSVIIYSTCDW 631
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
K +D TY +++G G + + + +M G +P TY
Sbjct: 632 SKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNGCIPDAVTY 678
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 157/320 (49%), Gaps = 1/320 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
S ++ + G DA+E FR +K+ +++ L+K + + + E
Sbjct: 68 VFSGLITAYLESGFLRDAIECFRLTRKHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYKEI 127
Query: 259 KDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+C P S FNIL+H +CK ++ AQ + + G P VVS+ I Y R D
Sbjct: 128 LECGYPTSLYFFNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDL 187
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
K M G P V T T++++ L K +++EA +++ +M +P+ +++L
Sbjct: 188 DKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTL 247
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I K+GRV A EI++ M +QG P+++TYNT+I C + + + A L+ +M
Sbjct: 248 IDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGL 307
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KPD TY L+ C++ ++ L M + + +D Y +L+ GL + G+ A
Sbjct: 308 KPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEK 367
Query: 498 FFEEMISKGIVPYHSTYKML 517
EM+S G+ P + TY M+
Sbjct: 368 MLREMLSVGLKPENGTYTMI 387
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 135/276 (48%), Gaps = 1/276 (0%)
Query: 235 LSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMF 293
++LM K + A VF C S + FN LI+G+ + +D + M
Sbjct: 139 FNILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMH 198
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
G PDV + T I C+E + ++ EM +KG P+ +T+T ++ K+ +++
Sbjct: 199 ASGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVD 258
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
AL++Y++M PD Y++LI+ L + G +K A ++ +M +G+ P+ +TY T+I
Sbjct: 259 LALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLI 318
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+C + E A +L ++M E+ + D Y L+ C++ R +L M +
Sbjct: 319 DGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLK 378
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ GTY ++ G + G ++ A +EM G VP
Sbjct: 379 PENGTYTMIINGFCKQGDVKTASKLLKEMQRDGHVP 414
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 112/250 (44%), Gaps = 38/250 (15%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T++ +R G D M GV D +VL++ L K + ++ A ++F
Sbjct: 170 SVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKESKMDEANELF 229
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD------------- 300
E K +P + F LI G CK+ +VD A + K+M +QG+SPD
Sbjct: 230 NEMLDKGLVP-NGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCR 288
Query: 301 ----------------------VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
++YT I+ C+E D + K M E+ + +
Sbjct: 289 KGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVA 348
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YT ++ L + + +A K+ +M S P+ Y+ +I K G VK A+++ ++M+
Sbjct: 349 YTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVKTASKLLKEMQ 408
Query: 399 KQGVVPNVLT 408
+ G VP V+T
Sbjct: 409 RDGHVPCVVT 418
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 173/371 (46%), Gaps = 13/371 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y ++D L K+ K L +++ L++G S ++++ L +DDA E F
Sbjct: 326 YGILIDGLAKAGKLNDARNLFQKL--LHSGVTPSTVAYTSLIHGLCMANSFDDARELFAD 383
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M + G +V++D K +E A + + +D +N ++ G CK+ +
Sbjct: 384 MNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSR 443
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF------RKVDDT---LKEMQEKGC 332
V++A EM + G +P+ S+ I C++ K+D+ LK M + G
Sbjct: 444 VEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGH 503
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P V+TY+ ++ L ++++A + E M C P ++LI L KAGR+K+A E
Sbjct: 504 VPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEARE 563
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ + M G P+V+TYNT++ C + E A +LL M P+ TY L+ C
Sbjct: 564 VLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLC 623
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ R+ + M + + + TY +L+ G +G+++ F EM+ GI P H
Sbjct: 624 KANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHV 683
Query: 513 TYKMLEEKLEK 523
Y L +L K
Sbjct: 684 VYGTLAAELCK 694
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 177/398 (44%), Gaps = 71/398 (17%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGG 211
+ G +P YN M+D K +L+K+M E +G+V + T +T+M L +
Sbjct: 385 NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIE--DGHVPDVVTYNTVMDGLCKSS 442
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI 271
R ++A+ F M++ G + R+ + ++ L + + ++ A
Sbjct: 443 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQA-------------------- 482
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT---LKEMQ 328
C+ K+D+A + +K M G PDVV+Y+ I C +VDD L++M
Sbjct: 483 -----CQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLC---SIARVDDARHLLEDMV 534
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
++ CKP+V+T ++H L KA +I EA +V + M S PD Y++L+ +AG+ +
Sbjct: 535 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE 594
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
A E+ DM +G+ PNV+TY ++S C + A + +M+ C P+ TY L+
Sbjct: 595 RARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 654
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL-------------------------- 482
C ++ L M +S D Y +L
Sbjct: 655 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 714
Query: 483 -----------VRGLIESGKLELACSFFEEMISKGIVP 509
V GL+E+GK+E+A F +M+ G +P
Sbjct: 715 EAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLP 752
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/361 (25%), Positives = 164/361 (45%), Gaps = 52/361 (14%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS 266
L + R DDA+E R M + + +L ++ L+ ++ A +V+ E + L +
Sbjct: 155 LCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVT 214
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR----EKDFR---- 318
N+L+ G+C +VD A++ ++ M + +PD VSY ++ C+ E+ R
Sbjct: 215 --LNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGD 272
Query: 319 ------------------------------KVDDTLK---EMQEKGCKPSVITYTIVMHA 345
++D+ ++ +M E+ P +Y I++
Sbjct: 273 RELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDG 332
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
L KA ++N+A +++K+ P T Y+SLI L A DA E+F DM ++G P+
Sbjct: 333 LAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPS 392
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
+TYN MI ++C R E A L++KM ED PD TY ++ C+ R++ L
Sbjct: 393 PVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFN 452
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACS---------FFEEMISKGIVPYHSTYKM 516
M + + + ++ +++ GL + K++ AC + M G VP TY
Sbjct: 453 EMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYST 512
Query: 517 L 517
L
Sbjct: 513 L 513
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/434 (22%), Positives = 180/434 (41%), Gaps = 85/434 (19%)
Query: 161 PEMYNTMVDVLGKSKKFCLMWELVKEMDEL---NNGYVSLATMSTIMRRLVRGGRYDDAV 217
P++YN ++D L K ++ E VK+M ++ + T +TI+ L + G+ D+A
Sbjct: 44 PDVYNVLIDSLSKRQE----TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAE 99
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS-SQIFNILIHGW 276
M+ + S L L S+E A+++ + +P++ S +NI++
Sbjct: 100 LVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLL----EIMPVANSSAYNIVVVAL 155
Query: 277 CKTRKVDDAQKAMKEMFQQGF--------------------------------SPDVVSY 304
CK +VDDA + + M ++ P +V+
Sbjct: 156 CKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTL 215
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK-------------- 350
+E +C K + L+ M ++ C P ++Y V+ L KA
Sbjct: 216 NVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDREL 275
Query: 351 ---------------------------QINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+I+EA++++EKM + PD+ Y LI L+K
Sbjct: 276 PSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAK 335
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
AG++ DA +F+ + GV P+ + Y ++I C + ++A +L M C P T
Sbjct: 336 AGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVT 395
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
Y ++ C++ ++ L+ M ++ D TY +++ GL +S ++E A F EM
Sbjct: 396 YNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEME 455
Query: 504 SKGIVPYHSTYKML 517
G P ++ +
Sbjct: 456 RLGCTPNRRSHNTI 469
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/311 (24%), Positives = 143/311 (45%), Gaps = 17/311 (5%)
Query: 236 SVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
+VL+D+L K E K+ D C P S F ++ G CK K+D+A+ M EM
Sbjct: 48 NVLIDSLSKRQETEAVKKMVQVMVDRGCFP-DSFTFTTILCGLCKAGKMDEAELVMDEMR 106
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
+ P + + C + L+ M Y IV+ AL KA +++
Sbjct: 107 SRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSS----AYNIVVVALCKAARVD 162
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
+AL++ M S++ L +GR+ +A +++ + +++ P ++T N ++
Sbjct: 163 DALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENRRE---PCLVTLNVLL 219
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK--VLNF----LLTHM 467
C+R + + A +LL+ M ++ C PD +Y +L C+ R++ V F L +
Sbjct: 220 EGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSS 279
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RL 526
+ Y ++ GL ++ +++ A FE+M + + P +Y +L + L K +L
Sbjct: 280 SSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKL 339
Query: 527 GNAKERINKLL 537
+A+ KLL
Sbjct: 340 NDARNLFQKLL 350
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/340 (20%), Positives = 141/340 (41%), Gaps = 75/340 (22%)
Query: 250 HAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
A K+F ++C ++N+LI K ++ + +K ++ M +G PD ++T +
Sbjct: 28 EAVKIFSLMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILC 87
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVIT------------------------------- 338
C+ + + + EM+ + P T
Sbjct: 88 GLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSA 147
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y IV+ AL KA ++++AL++ M S++ L +GR+ +A +++ + +
Sbjct: 148 YNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRIDEALQVYRENR 207
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR-- 456
++ P ++T N ++ C+R + + A +LL+ M ++ C PD +Y +L C+ R
Sbjct: 208 RE---PCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVE 264
Query: 457 -----------------------MKVLNFLLTHMFKND----------------VSMDAG 477
++ N ++ + +ND VS D+
Sbjct: 265 EAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSW 324
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+Y L+ GL ++GKL A + F++++ G+ P Y L
Sbjct: 325 SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSL 364
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 102/211 (48%), Gaps = 7/211 (3%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCR-EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
MFQQG P + +T I+ +C + F V + + E+ P Y +++ +L K +
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAV--KIFSLMEECHSPYPDVYNVLIDSLSKRQ 58
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
+ K+ + M C PD+ +++++ L KAG++ +A + ++M+ + + P T +
Sbjct: 59 ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
+ C R E A +LL+ M + Y ++ C+ R+ L M +
Sbjct: 119 FLAHELCLRGSMERAFQLLEIMP----VANSSAYNIVVVALCKAARVDDALELARTMSEK 174
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEE 501
+ + AG+ S++ GL++SG+++ A + E
Sbjct: 175 RIPLAAGSLDSVLVGLMDSGRIDEALQVYRE 205
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC-KPDCETYAPLLKMCCRKK 455
M +QG+ P L + ++I C A+K+ MEE C P + Y L+ +++
Sbjct: 1 MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEE--CHSPYPDVYNVLIDSLSKRQ 58
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ + ++ M D+ T+ +++ GL ++GK++ A +EM S+ I PY +T
Sbjct: 59 ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118
Query: 516 MLEEKL 521
L +L
Sbjct: 119 FLAHEL 124
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 3/136 (2%)
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKK-QGVVPNVLTYNTMISSACARSEEENAL 426
P ++S+I GR +A +IF M++ P+V YN +I S R E E
Sbjct: 7 FPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQETEAVK 64
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
K++Q M + C PD T+ +L C+ +M ++ M + T + L L
Sbjct: 65 KMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHEL 124
Query: 487 IESGKLELACSFFEEM 502
G +E A E M
Sbjct: 125 CLRGSMERAFQLLEIM 140
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 182/399 (45%), Gaps = 41/399 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ + + G + C+ LV + L +G +L T + ++R L + GR DA
Sbjct: 254 YSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDE 313
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAY--KVFLEFKDCIP----------------- 263
M + GV + ++D K ++ A K +E C P
Sbjct: 314 MPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKP 373
Query: 264 ------LSSQI----------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
L+ I F +I+G+CK K+DDA + M D+ +Y
Sbjct: 374 DEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVL 433
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I ++ ++ DTL E+ G P+V+ YT ++ A K ++ AL+V++ + + C
Sbjct: 434 ISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGC 493
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P+ YSSLI+ L + ++ A + M++ G+ P V+TY T+I C + E +NA +
Sbjct: 494 RPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFR 553
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
L + ME++ PD + Y L C+ R + +FL+ K V + TY SLV G
Sbjct: 554 LFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLV----KKGVVLTKVTYTSLVDGF 609
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
++G E A + E+M+++G TY +L + L K++
Sbjct: 610 SKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQK 648
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 186/406 (45%), Gaps = 22/406 (5%)
Query: 140 DLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLAT 199
D A FF W + G+ HT + ++ +L + + D+L +S +
Sbjct: 69 DPATALAFFEWVARRPGFRHTAASHAALLQLLARRRA-------PANYDKLVVSMISCSG 121
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF- 258
+ MR V DA++A R + + ++ + +L++ + EH K++ +
Sbjct: 122 TAEDMREAV------DAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLV 175
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
++ + + +N +I +CK + A + + + + G D + + YCR D R
Sbjct: 176 QEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLR 235
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
K L M GC+ + +YTI++ L + + + EAL + M D C P+ Y+ LI
Sbjct: 236 KACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLI 295
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L K GR+ DA + ++M ++GVVP+V TYN MI C ++AL + ME + C
Sbjct: 296 RGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCN 355
Query: 439 PDCETYAPLLKMCCRKK---RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
PD TY L+ C K ++LN + F V T+ +++ G ++ K++ A
Sbjct: 356 PDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTVI----TFTNIINGYCKAEKIDDA 411
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHA 540
MIS Y +L L KK RL AK+ +N++ A+
Sbjct: 412 LRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANG 457
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 164/374 (43%), Gaps = 15/374 (4%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-----LATMSTIMRRLVRGGRYDDA 216
+ Y ++ VL K + L + D LN + + + ++I+ + G+ A
Sbjct: 428 QAYGVLISVLIKKHR------LKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAA 481
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHG 275
+E F+ + G + S L+ L++ + A + + + D I + LI G
Sbjct: 482 LEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQG 541
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
CK + D+A + + M Q G +PD +Y + C+ + ++ + +KG +
Sbjct: 542 QCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVKKGVVLT 598
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+TYT ++ KA A + EKM ++ C D+ YS L+ L K ++ +A I +
Sbjct: 599 KVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILD 658
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M +GV N++ Y +IS + ++A + +M KP TY + C+
Sbjct: 659 QMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIG 718
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
R++ L+ M +N V+ D TY + G G ++ A S + MI P + TY
Sbjct: 719 RIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYW 778
Query: 516 MLEEKLEKKRLGNA 529
+L + K L NA
Sbjct: 779 LLLKHFLKMSLANA 792
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 173/420 (41%), Gaps = 26/420 (6%)
Query: 122 GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
GV +L++ ++ D AF F + Q G + YN + D L KS + +
Sbjct: 531 GVITYTTLIQGQCKKHEFD--NAFRLFEMME-QNGLTPDEQAYNVLTDALCKSGRAEEAY 587
Query: 182 E-LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
LVK+ L T ++++ + G + A M G + D+ SVL+
Sbjct: 588 SFLVKKGVVLTK-----VTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQ 642
Query: 241 TLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L K + A + + + + + I+I K K D A+ EM G P
Sbjct: 643 ALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKP 702
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
++YT FI YC+ + + EM+ G P V+TY + ++ G ++ A
Sbjct: 703 SAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTL 762
Query: 360 EKMKSDDCLPDTSFYSSLI--FI---LSKAGRVKDAN-----------EIFEDMKKQGVV 403
++M C P+ Y L+ F+ L+ A V + ++ E M K G+
Sbjct: 763 KRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLN 822
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P +TY+++I+ C + E A LL M P+ E Y L+K CC K +
Sbjct: 823 PTAVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASF 882
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+T+M + +Y L+ GL + G + A + F +++ +K+L + L K
Sbjct: 883 VTNMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLK 942
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 167/386 (43%), Gaps = 20/386 (5%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGGRYD 214
G + T Y ++VD K+ L+++M +N G + + T S +++ L + + +
Sbjct: 594 GVVLTKVTYTSLVDGFSKAGNTEFAAALIEKM--VNEGCKADSHTYSVLLQALCKQKKLN 651
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILI 273
+A+ M GV+ + A ++++ ++K +HA +F E S I + + I
Sbjct: 652 EALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFI 711
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+CK ++++A + EM + G +PDVV+Y FI TLK M + C+
Sbjct: 712 SSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCE 771
Query: 334 PSVITYTIVMH-----ALGKAK-----------QINEALKVYEKMKSDDCLPDTSFYSSL 377
P+ TY +++ +L A +++ ++ E+M P YSS+
Sbjct: 772 PNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSI 831
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I KA R+++A + + M + + PN Y +I C E A + M E
Sbjct: 832 IAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGF 891
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
+P E+Y L+ C + L + + D + + + L GL+++G +++
Sbjct: 892 QPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQ 951
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
M ++ TY M+ + +
Sbjct: 952 LLSAMENRHCRIDSETYSMVTNNIHE 977
>gi|242038151|ref|XP_002466470.1| hypothetical protein SORBIDRAFT_01g008320 [Sorghum bicolor]
gi|241920324|gb|EER93468.1| hypothetical protein SORBIDRAFT_01g008320 [Sorghum bicolor]
Length = 181
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 67/145 (46%), Positives = 97/145 (66%)
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M + G+ PN+ T+NT+IS+AC S+ ENALKLL +MEE CKPD +TY PLLK+CCR++
Sbjct: 1 MHRTGISPNLTTFNTLISAACDHSQAENALKLLVRMEEQSCKPDIKTYTPLLKLCCRRQW 60
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+K L FL+ HMF+ D++ D TY LV L +G+L +C F EEM+ KG P T+ +
Sbjct: 61 VKTLLFLICHMFRKDITPDFSTYTLLVSWLCRNGRLTQSCLFLEEMVLKGFAPQQETFDL 120
Query: 517 LEEKLEKKRLGNAKERINKLLAHAK 541
+ +KL+K + +A +I L H +
Sbjct: 121 VLDKLKKMNMLSAVRKIQLLRMHTE 145
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 56/122 (45%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M + G SP++ ++ I C L M+E+ CKP + TYT ++ + +
Sbjct: 1 MHRTGISPNLTTFNTLISAACDHSQAENALKLLVRMEEQSCKPDIKTYTPLLKLCCRRQW 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+ L + M D PD S Y+ L+ L + GR+ + E+M +G P T++
Sbjct: 61 VKTLLFLICHMFRKDITPDFSTYTLLVSWLCRNGRLTQSCLFLEEMVLKGFAPQQETFDL 120
Query: 412 MI 413
++
Sbjct: 121 VL 122
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 51/118 (43%)
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M G P++ T+ ++ A Q ALK+ +M+ C PD Y+ L+ + +
Sbjct: 1 MHRTGISPNLTTFNTLISAACDHSQAENALKLLVRMEEQSCKPDIKTYTPLLKLCCRRQW 60
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
VK + M ++ + P+ TY ++S C + L++M P ET+
Sbjct: 61 VKTLLFLICHMFRKDITPDFSTYTLLVSWLCRNGRLTQSCLFLEEMVLKGFAPQQETF 118
Score = 43.5 bits (101), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 46/94 (48%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FN LI C + ++A K + M +Q PD+ +YT ++ CR + + + + M
Sbjct: 13 FNTLISAACDHSQAENALKLLVRMEEQSCKPDIKTYTPLLKLCCRRQWVKTLLFLICHMF 72
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
K P TYT+++ L + ++ ++ E+M
Sbjct: 73 RKDITPDFSTYTLLVSWLCRNGRLTQSCLFLEEM 106
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/447 (25%), Positives = 201/447 (44%), Gaps = 60/447 (13%)
Query: 145 FGFFTWAK-TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
F T+ K T+ G+ T +NT++ L + +L +M + N + T +T+
Sbjct: 33 FALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPN-----VVTFTTL 87
Query: 204 MRRLVRGGRYDDAVEAFR-------------------GMKKYG----------------- 227
M L R GR +AV GM K G
Sbjct: 88 MNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSH 147
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQ 286
++ D S ++D L K A +F+E +D I ++ +I+G+C + K +AQ
Sbjct: 148 IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQ 207
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
+ ++EM + SPDVV+++ I +E D D L+EM G P+V+T ++ L
Sbjct: 208 RLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGL 267
Query: 347 GKAKQINEALKVYEKMKS-----------DDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ ++ +AL++++ M+ + PD Y+ LI L G+ +A E++E
Sbjct: 268 CDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYE 327
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M +G+VP+ +TY++MI+ C +S + A ++ M P+ T+ L+ C+
Sbjct: 328 EMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAG 387
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ L M + + +A TY +L+RG + G + + F+EMIS G+ P T +
Sbjct: 388 MVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIR 447
Query: 516 MLEEKLEKKRLGNAKERINKLLAHAKE 542
+ L +KE + K LA +E
Sbjct: 448 NMLTGLW------SKEELKKALAMLEE 468
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 132/293 (45%), Gaps = 48/293 (16%)
Query: 246 NSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
N+++H + IP FNILI +C K+ A ++ + GF P +V++
Sbjct: 3 NNIKHGLQ--------IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFN 54
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
+ C E + D +M CKP+V+T+T +M+ L + ++ EA+ + ++M D
Sbjct: 55 TLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVED 110
Query: 366 DCL------------------------------------PDTSFYSSLIFILSKAGRVKD 389
PD YS++I L K GR D
Sbjct: 111 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTD 170
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A +F +M+ +G+ P+++TY+ MI+ C+ + A +LLQ+M PD T++ L+
Sbjct: 171 AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLIN 230
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
++ + LL M + V + T +L+ GL +SGKL+ A F+ M
Sbjct: 231 ALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM 283
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D+ S+ I+ +C T ++ + G P+++T+ ++H L +++EAL ++
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+M C P+ +++L+ L + GRV +A + + M + G+ PN +TY T++ C
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 420 SEEENALKLLQKMEE-DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ +AL LL+KMEE KPD Y+ ++ + R L M + D T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR-LGNAKERINKLL 537
Y+ ++ G SGK A +EM+ + I P T+ L L K+ L +A++ + +++
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249
Query: 538 AHA 540
+
Sbjct: 250 SSG 252
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 131/282 (46%), Gaps = 13/282 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ M++ S K+ L++EM + + T S ++ LV+ G + A + + M
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEM-LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------------DCIPLSSQIFNI 271
GV + + L+D L ++ A ++F + + + Q +NI
Sbjct: 249 ISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNI 308
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G K +A++ +EM +G PD V+Y+ I C++ + M K
Sbjct: 309 LISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKS 368
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P+++T+ ++ KA +++ L+++ +M + + Y +LI K G + +
Sbjct: 369 FSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSL 428
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+IF++M GV P+ +T M++ ++ E + AL +L++++
Sbjct: 429 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAMLEELQ 470
>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g07290, mitochondrial; Flags: Precursor
gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 880
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 98/323 (30%), Positives = 159/323 (49%), Gaps = 6/323 (1%)
Query: 189 ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG-MKKYGVEKDTRALSVLMDTLVKGNS 247
E + V + TI+ L + G Y +A E F + K G D+ + L+ +G +
Sbjct: 187 EADGFVVGMIDYRTIVNALCKNG-YTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245
Query: 248 VEHAYKVFLEFK---DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+ A KVF C P +S ++ILIHG C+ ++++A +M ++G P +Y
Sbjct: 246 LRDALKVFDVMSKEVTCAP-NSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTY 304
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
T I+ C K + EM +GCKP+V TYT+++ L + +I EA V KM
Sbjct: 305 TVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVK 364
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
D P Y++LI K GRV A E+ M+K+ PNV T+N ++ C +
Sbjct: 365 DRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYK 424
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A+ LL++M ++ PD +Y L+ CR+ M LL+ M D+ D T+ +++
Sbjct: 425 AVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIIN 484
Query: 485 GLIESGKLELACSFFEEMISKGI 507
+ GK ++A +F M+ KGI
Sbjct: 485 AFCKQGKADVASAFLGLMLRKGI 507
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 179/406 (44%), Gaps = 27/406 (6%)
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKF----CLMWELVKE-- 186
+L+R ND+ FF W + Y P N ++ ++ S + ++ L+KE
Sbjct: 77 SLQRSDNDI--CVRFFMWVCKHSSYCFDPTQKNQLLKLIVSSGLYRVAHAVIVALIKECS 134
Query: 187 ------------MDELNNGY---VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
DEL + ++ S+++ L + A +R M+ G
Sbjct: 135 RCEKEMLKLMYCFDELREVFGFRLNYPCYSSLLMSLAKLDLGFLAYVTYRRMEADGFVVG 194
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+++ L K N A ++F+ K L S I L+ G+C+ + DA K
Sbjct: 195 MIDYRTIVNALCK-NGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDALKVF 253
Query: 290 KEMFQQ-GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
M ++ +P+ VSY+ I C + +M EKGC+PS TYT+++ AL
Sbjct: 254 DVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCD 313
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
I++A ++++M C P+ Y+ LI L + G++++AN + M K + P+V+T
Sbjct: 314 RGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVIT 373
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YN +I+ C A +LL ME+ CKP+ T+ L++ CR + LL M
Sbjct: 374 YNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRML 433
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
N +S D +Y L+ GL G + A M I P T+
Sbjct: 434 DNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTF 479
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 155/326 (47%), Gaps = 4/326 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF- 258
++++ RG DA++ F M K+ ++ + S+L+ L + +E A+ + +
Sbjct: 234 TSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMG 293
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K C P S++ + +LI C +D A EM +G P+V +YT I+ CR+
Sbjct: 294 EKGCQP-STRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKI 352
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + ++M + PSVITY +++ K ++ A ++ M+ C P+ ++ L
Sbjct: 353 EEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNEL 412
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ L + G+ A + + M G+ P++++YN +I C A KLL M
Sbjct: 413 MEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDI 472
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
+PDC T+ ++ C++ + V + L M + +S+D T +L+ G+ + GK A
Sbjct: 473 EPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALF 532
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
E ++ I+ + ++ + L K
Sbjct: 533 ILETLVKMRILTTPHSLNVILDMLSK 558
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 161/372 (43%), Gaps = 40/372 (10%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T + ++ L R G+ ++A R M K + + L++ K V A+++ +
Sbjct: 338 TYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVM 397
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
E + C P + + FN L+ G C+ K A +K M G SPD+VSY I+ CRE
Sbjct: 398 EKRACKP-NVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHAL---GKAK----------------------- 350
L M +P +T+T +++A GKA
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516
Query: 351 ---------QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+ +AL + E + L + ++ +LSK +VK+ + + K G
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+VP+V+TY T++ + + ++L+ M+ C P+ Y ++ C+ R++
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK- 520
LL+ M + VS + TY +V+G + +GKL+ A M+ +G Y L +
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696
Query: 521 -LEKKRLGNAKE 531
L +K + N++E
Sbjct: 697 VLSQKGIDNSEE 708
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 78/402 (19%), Positives = 174/402 (43%), Gaps = 71/402 (17%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
+GK++ + E + +M L + +++ I+ L +G + + + + K G+
Sbjct: 524 VGKTRDALFILETLVKMRILTTPH----SLNVILDMLSKGCKVKEELAMLGKINKLGLVP 579
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
+ L+D L++ + ++++ ++ C+P + + I+I+G C+ +V++A+K
Sbjct: 580 SVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLP-NVYPYTIIINGLCQFGRVEEAEKL 638
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
+ M G SP+ V+YT ++ Y + +T++ M E+G + + Y+ ++
Sbjct: 639 LSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVL 698
Query: 349 AKQ----------------------INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
+++ INE + V E++ C+ + L+ L K GR
Sbjct: 699 SQKGIDNSEESTVSDIALRETDPECINELISVVEQLGG--CISGLCIF--LVTRLCKEGR 754
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
++N++ +++ ++GV E A+ ++ E+Y
Sbjct: 755 TDESNDLVQNVLERGVFL------------------EKAMDIIM-----------ESY-- 783
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI-SK 505
C +KK K + L+T + K+ ++ +++GL + G E A E++ S
Sbjct: 784 ----CSKKKHTKCME-LITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSN 838
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINKL-LAHAKEQKTF 546
G+V +E +E G+ E I+ + H +E+ TF
Sbjct: 839 GVVEKSGVLTYVECLMEGDETGDCSEVIDLVDQLHCRERPTF 880
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 185/400 (46%), Gaps = 20/400 (5%)
Query: 145 FGFFTW--AKTQTGYMHTPEMYNTMVDVLGK----SKKFCLMWELVKEMDELNNGYVSLA 198
F FFTW + + + HT Y TM+ L S+ L+ +V + + V A
Sbjct: 1 FSFFTWLSSPANSNFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 199 TMST-------------IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
+ T ++ + G DA+E +R +++ +++ L+K
Sbjct: 61 ILETRGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPIDTCRKVLEHLMKL 120
Query: 246 NSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+ + + E +C P S FNIL+H +CK + AQ + + G P VVSY
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLRPSVVSY 180
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ Y R D + M G +P V TY+++++ L K ++++A +++++M
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLV 240
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
+P+ +++LI K GRV A EI++ M Q + P+++TYNT+I C + + +
Sbjct: 241 KGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQ 300
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A L+ +M KPD TY L+ CC++ + M + ++ +D Y +L+
Sbjct: 301 AHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALIS 360
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
GL + G+ A EM+S G+ P TY M+ + KK
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKK 400
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 129/255 (50%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K + ++ A ++F
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K +P + F LI G CK +VD A + K+M Q SPD+++Y I C+
Sbjct: 236 DEMLVKGLVP-NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 294
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ + EM KG KP ITYT ++ K ++ A + ++M ++ D
Sbjct: 295 KGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVA 354
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P+ TY +I+ C + + KLL++M+
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 434 EDLCKPDCETYAPLL 448
D P TY L+
Sbjct: 415 RDGHVPSVVTYNVLM 429
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 147/317 (46%), Gaps = 4/317 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W +E+ L GY SL + +M R + G A F + K+G+
Sbjct: 117 LMKLKYFKLVWGFYEEI--LECGYPASLYFFNILMHRFCKDGDIRLAQSVFDAITKWGLR 174
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKV-FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
+ + LM+ ++ ++ +++ + +++LI+G CK K+DDA +
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANEL 234
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
EM +G P+ V++T I+ +C+ + K+M + P +ITY +++ L K
Sbjct: 235 FDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 294
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
+ +A + ++M PD Y++LI K G + A E + M ++ + + +
Sbjct: 295 KGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVA 354
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y +IS C +A K+L++M KPD TY ++ C+K + + LL M
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 469 KNDVSMDAGTYASLVRG 485
++ TY L+ G
Sbjct: 415 RDGHVPSVVTYNVLMNG 431
>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
Length = 647
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 91/385 (23%), Positives = 177/385 (45%), Gaps = 10/385 (2%)
Query: 161 PEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVE 218
P +YN ++D L + ++ +V D + V ++ T + ++R L + R A +
Sbjct: 128 PRLYNHLIDALLREN---MVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARK 184
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCK 278
M + G D + ++ L K + ++ A +V +P + +N ++ C+
Sbjct: 185 MLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAA----MPPVAASYNAIVLALCR 240
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
++ + + +M +G P+V++YT ++ +C+ + R L M GC P+V+T
Sbjct: 241 EFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVT 300
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+T ++ L ++++AL ++ M ++ P T Y+ LI L G +K A+ I M+
Sbjct: 301 FTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSME 360
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ G PNV TY+T+I + A+ + M CKP+ Y ++ + C+K
Sbjct: 361 QHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFN 420
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
L+ M + + T+ +L+R L + ++ A F EM G VP TY L
Sbjct: 421 QAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELI 480
Query: 519 EKL-EKKRLGNAKERINKLLAHAKE 542
L + G+A + ++ +H E
Sbjct: 481 HGLFREGNCGDALHMVTEMQSHGIE 505
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 83/356 (23%), Positives = 174/356 (48%), Gaps = 4/356 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+VD K+ + + ++ M + ++ T + ++R L GR DA++ +R M
Sbjct: 266 YTTIVDAFCKAGELRMACAILARM-VITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 324
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G T + ++L+ L ++ A + +E C P + + ++ LI G+ K
Sbjct: 325 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFP-NVRTYSTLIDGFSKAGD 383
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ A +M + G P+VV YT ++ +C++ F + + +M + C P+ +T+
Sbjct: 384 LGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNT 443
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ +L +++ AL V+ +M+ C+P+ Y+ LI L + G DA + +M+ G
Sbjct: 444 LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHG 503
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ +++TYNT++S C A+ + KM +P+ T++ ++ C++ +++
Sbjct: 504 IELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAA 563
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++L M + + Y L+ L KL A ++ +M+ +GI P T+ +L
Sbjct: 564 WMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVL 619
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 150/356 (42%), Gaps = 9/356 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+V VL K + E++ M + Y + I+ L R R + M
Sbjct: 201 YATIVSVLCKLDRLDEATEVLAAMPPVAASY------NAIVLALCREFRMQEVFSVVSDM 254
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G++ + + ++D K + A + + C P + F L+ G +
Sbjct: 255 VGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTP-NVVTFTALVRGLFDDGR 313
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V DA + M +G++P VSY I C D + L M++ GC P+V TY+
Sbjct: 314 VHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYST 373
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ KA + A+ ++ M C P+ Y++++ + K A + + M +
Sbjct: 374 LIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLEN 433
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
PN +T+NT+I S C AL + +M C P+ TY L+ R+
Sbjct: 434 CPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDAL 493
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++T M + + + TY ++V GL ++ A F +MI +GI P T+ +
Sbjct: 494 HMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAI 549
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 136/331 (41%), Gaps = 10/331 (3%)
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL----EFK 259
+RRL G D A + M+ GV AL + + + + A K F +
Sbjct: 62 VRRLAAAGDVDGVQLALQEMRLRGVPCTEGALVAAVGAFARAGAPDRALKTFYRAVHDLG 121
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
P +++N LI + V M + G P+V +Y + C+
Sbjct: 122 CARPTEPRLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGA 181
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
L EM KGC P +TY ++ L K +++EA +V M P + Y++++
Sbjct: 182 ARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVL 236
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L + R+++ + DM +G+ PNV+TY T++ + C E A +L +M C P
Sbjct: 237 ALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTP 296
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
+ T+ L++ R+ + M + +Y L+RGL G L+ A S
Sbjct: 297 NVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSIL 356
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKKR-LGNA 529
M G P TY L + K LG A
Sbjct: 357 NSMEQHGCFPNVRTYSTLIDGFSKAGDLGGA 387
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 154/314 (49%), Gaps = 5/314 (1%)
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCK 278
R M+ +G+ D ++++ + + A +V E C L + +N L++G CK
Sbjct: 4 LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R++ DA+ + EM ++G PD+ ++T I YC E K M + +P ++T
Sbjct: 64 ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ + + +++A +++ M S + P+ YS LI + G+V+DA ++M
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+G++PN++TYN++I C K LQKM + PD TY L+ ++ +M
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY-KML 517
LL M K V D TY L+ G G ++ A FE+M +KGI P TY M+
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303
Query: 518 EEKLEKKRLGNAKE 531
+ GN+KE
Sbjct: 304 NGHVTA---GNSKE 314
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 144/310 (46%), Gaps = 1/310 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
+ ++ R G DA+ M G D + L++ L K + A + E ++
Sbjct: 20 TMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRE 79
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+P F LIHG+C K+D A + M Q PD+V+Y I+ CR+ D K
Sbjct: 80 RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDK 139
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+D +M + P+ +TY+I++ + + Q+ +A ++M + LP+ Y+S+I
Sbjct: 140 ANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIK 199
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
++G V + + M V P+++TYNT+I + +A KLL ME++ +P
Sbjct: 200 GYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQP 259
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY L+ ++ ++ M + D TY S++ G + +G + A
Sbjct: 260 DVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLH 319
Query: 500 EEMISKGIVP 509
+EM+ +G P
Sbjct: 320 DEMLQRGFAP 329
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 4/279 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT+++ L K ++ L+ EM E L T +T++ G+ D A++ F M
Sbjct: 54 YNTLLNGLCKERRLLDAEGLLNEMRE-RGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTM 112
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ D + L+D + + ++ A ++ + ++ P + ++ILI C+ +
Sbjct: 113 LNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFP-NHVTYSILIDSHCEKGQ 171
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V+DA + EM +G P++++Y I+ YCR + K L++M P +ITY
Sbjct: 172 VEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNT 231
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H K ++++A K+ M+ + PD Y+ LI S G V++A IFE M +G
Sbjct: 232 LIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKG 291
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
+ P+ TY +MI+ + A +L +M + PD
Sbjct: 292 IEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 93/215 (43%), Gaps = 10/215 (4%)
Query: 164 YNTMVDVL---GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
YNT++D + G K +W+ + + N T S ++ G+ +DA
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH----VTYSILIDSHCEKGQVEDAFGFL 179
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCK 278
M G+ + + ++ + +V K FL+ +S + +N LIHG+ K
Sbjct: 180 DEMINKGILPNIMTYNSIIKGYCRSGNVSKGQK-FLQKMMVNKVSPDLITYNTLIHGYIK 238
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
K+ DA K + M ++ PDVV+Y I + + ++ ++M KG +P T
Sbjct: 239 EDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYT 298
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
Y +++ A EA +++++M PD F
Sbjct: 299 YMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDDKF 333
>gi|28393724|gb|AAO42273.1| unknown protein [Arabidopsis thaliana]
Length = 642
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 142/556 (25%), Positives = 238/556 (42%), Gaps = 63/556 (11%)
Query: 35 TTAESPSSTES-PSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISS-----RV 88
+A S S+ S SLP + F Q+ +E + S+ ES + EK ++S R+
Sbjct: 4 VSARSGSAKRSISSLPHLSQRF-KQTENEIVQMFSVPNHEESEKPQEKWKLSRKDPSVRM 62
Query: 89 LSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFF 148
L E +I KI K +K +E LK + V + LV L ++ FF
Sbjct: 63 LDER----FIRIVKIF-KWGPDAEKALEVLK---LKVDHRLVRSILE-IDVEINVKIQFF 113
Query: 149 TWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL--ATMSTIMRR 206
WA + + H Y T++ L +++ + M+ ++E+ + N YVS+ A +S +++
Sbjct: 114 KWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEV--VRNTYVSVSPAVLSELVKA 171
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIP 263
L R A+ F K + + + ++ L++ E ++V+ E DC P
Sbjct: 172 LGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP 231
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+ ++ LI + K + D A + EM P YT + Y + K D
Sbjct: 232 -DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDL 290
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
+EM+ GC P+V TYT ++ LGKA +++EA Y+ M D PD F ++L+ IL K
Sbjct: 291 FEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNT-------------------------------- 411
GRV++ +F +M P V++YNT
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEF 410
Query: 412 ----MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
+I C + E AL LL++M+E P Y L+ + KR + + L +
Sbjct: 411 TYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKEL 470
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLG 527
+N ++ + YA +++ + GKL A F EM ++G P Y L + K +
Sbjct: 471 KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMI 530
Query: 528 NAKERINKLLAHAKEQ 543
N N LL +E
Sbjct: 531 N---EANSLLRKMEEN 543
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 93/351 (26%), Positives = 163/351 (46%), Gaps = 5/351 (1%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
T ++Y T++ + K K +L +EM ++ T + +++ L + GR D+A
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCS-PTVYTYTELIKGLGKAGRVDEAYGF 325
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWC 277
++ M + G+ D L+ LM+ L K VE VF E C P +N +I
Sbjct: 326 YKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVS-YNTVIKALF 384
Query: 278 KTRK-VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+++ V + +M SP +Y+ I+ YC+ K L+EM EKG P
Sbjct: 385 ESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
Y +++ALGKAK+ A ++++++K + + Y+ +I K G++ +A ++F +
Sbjct: 445 AAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
MK QG P+V YN ++S A LL+KMEE+ C+ D ++ +L R
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + + + + D TY +L+ +G E A EM KG
Sbjct: 565 PRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGF 615
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 184/446 (41%), Gaps = 46/446 (10%)
Query: 114 VVEALKGCGVSVSNSLVEQTLRRFSND--LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL 171
+ E ++ VSVS +++ + ++ ++ A F AK + T YN+++ +L
Sbjct: 149 IQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKC-KPTSSTYNSVILML 207
Query: 172 GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
+ + + E+ EM + + T S ++ + GR D A+ F MK ++
Sbjct: 208 MQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPT 267
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ + L+ K VE A +F E K C P + + LI G K +VD+A
Sbjct: 268 EKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSP-TVYTYTELIKGLGKAGRVDEAYGFY 326
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
K+M + G +PDVV + + ++ + EM C P+V++Y V+ AL ++
Sbjct: 327 KDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFES 386
Query: 350 K-QINEALKVYEKMKSDDCLPDTSFYS--------------------------------- 375
K ++E ++KMK+D P YS
Sbjct: 387 KAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAA 446
Query: 376 --SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS--SACARSEEENALKLLQK 431
SLI L KA R + A+E+F+++K+ + Y MI C + E A+ L +
Sbjct: 447 YCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCGKLSE--AVDLFNE 504
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M+ PD Y L+ + + N LL M +N D ++ ++ G +G
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGV 564
Query: 492 LELACSFFEEMISKGIVPYHSTYKML 517
A FE + GI P TY L
Sbjct: 565 PRRAIEMFETIKHSGIKPDGVTYNTL 590
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 125/255 (49%), Gaps = 5/255 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA--TMSTIMRRLVRGGRYDDAVEAFR 221
YNT++ L +SK + E+ D++ VS + T S ++ + R + A+
Sbjct: 376 YNTVIKALFESKAH--VSEVSSWFDKMKADSVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP-LSSQIFNILIHGWCKTR 280
M + G A L++ L K E A ++F E K+ +SS+++ ++I + K
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAADELFKELKENFGNVSSRVYAVMIKHFGKCG 493
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+ +A EM QG PDV +Y + + + + L++M+E GC+ + ++
Sbjct: 494 KLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHN 553
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + A++++E +K PD Y++L+ + AG ++A + +MK +
Sbjct: 554 IILNGFARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDK 613
Query: 401 GVVPNVLTYNTMISS 415
G + +TY++++ +
Sbjct: 614 GFEYDAITYSSILDA 628
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/236 (22%), Positives = 97/236 (41%), Gaps = 35/236 (14%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ P Y ++++ LGK+K++ EL KE+ E N G VS + +++ + G+
Sbjct: 437 EKGFPPCPAAYCSLINALGKAKRYEAADELFKELKE-NFGNVSSRVYAVMIKHFGKCGKL 495
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILI 273
+AV+ F MK G D A +N L+
Sbjct: 496 SEAVDLFNEMKNQGSGPDVYA----------------------------------YNALM 521
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
G K +++A +++M + G D+ S+ + + R R+ + + ++ G K
Sbjct: 522 SGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMFETIKHSGIK 581
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
P +TY ++ A EA ++ +MK D YSS++ + KD
Sbjct: 582 PDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGNVDHEKD 637
>gi|302781572|ref|XP_002972560.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
gi|300160027|gb|EFJ26646.1| hypothetical protein SELMODRAFT_32515 [Selaginella moellendorffii]
Length = 341
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 167/333 (50%), Gaps = 10/333 (3%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T STI+R G A+ MK V + + ++++ L K + A + +
Sbjct: 6 TYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLLHSM 65
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP-DVVSYTCFIEHYCREK 315
C P +NILI+ CK +++DAQ + EM Q P D+V+Y I CR+
Sbjct: 66 ATTSCAP-DIYTYNILINALCKVGRLEDAQ-GLVEMMQARDCPTDIVTYNTLIHGLCRKG 123
Query: 316 DFR-KVDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
+ R +V+ + EM +KG P+ +TYT+V+ AL + K +A KV + M + C D
Sbjct: 124 NGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDL 183
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y+ LI +KAG + A ++F +M +G +P+V+TYN+++ C + E A KL +
Sbjct: 184 VTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAE 243
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M+ P+ TY + C + RM+ + L M K + +DA +Y +L+ + + GK
Sbjct: 244 MKARGIFPNGRTYTSITDACLKAGRMQDAHAYLVEMRKEGL-VDAISYVALISTICKLGK 302
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+L EM+ KG P T+ ++ E L K+
Sbjct: 303 GKLGFQLLREMLEKGFKPNLVTFNVVFEALSKE 335
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/272 (22%), Positives = 129/272 (47%), Gaps = 6/272 (2%)
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+P +++++NI++ CK K +A + M +PD+ +Y I C+
Sbjct: 35 VPANAKLYNIILTHLCKHGKEKEALDLLHSMATTSCAPDIYTYNILINALCKVGRLEDAQ 94
Query: 322 DTLKEMQEKGCKPSVITYTIVMHAL---GKAK-QINEALKVYEKMKSDDCLPDTSFYSSL 377
++ MQ + C ++TY ++H L G + ++ A +++E+M P + Y+ +
Sbjct: 95 GLVEMMQARDCPTDIVTYNTLIHGLCRKGNGRFRVERAFRLFEEMVDKGHTPTSVTYTVV 154
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L + + A ++ + M + G +++TYN +I+ + A+ L +M C
Sbjct: 155 IDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFAKAGMMDKAMDLFVEMPTRGC 214
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD TY ++ C+ +++ N L M + + TY S+ +++G+++ A +
Sbjct: 215 IPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDACLKAGRMQDAHA 274
Query: 498 FFEEMISKGIVPYHSTYKMLEE--KLEKKRLG 527
+ EM +G+V S ++ KL K +LG
Sbjct: 275 YLVEMRKEGLVDAISYVALISTICKLGKGKLG 306
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 114/251 (45%), Gaps = 7/251 (2%)
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+ +Y+ + YC + + R+ L+ M+ + Y I++ L K + EAL +
Sbjct: 3 NAFTYSTIVRGYCEDGETRQALALLEHMKNAEVPANAKLYNIILTHLCKHGKEKEALDLL 62
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC-- 417
M + C PD Y+ LI L K GR++DA + E M+ + +++TYNT+I C
Sbjct: 63 HSMATTSCAPDIYTYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRK 122
Query: 418 --ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
R E A +L ++M + P TY ++ R K + +L M +N + D
Sbjct: 123 GNGRFRVERAFRLFEEMVDKGHTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFD 182
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
TY L+ ++G ++ A F EM ++G +P TY + + K E NK
Sbjct: 183 LVTYNMLINRFAKAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCK---AGKVEEANK 239
Query: 536 LLAHAKEQKTF 546
L A K + F
Sbjct: 240 LFAEMKARGIF 250
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 119/267 (44%), Gaps = 41/267 (15%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGNS---VEHAYKV 254
T + ++ L + GR +DA M+ D + L+ L KGN VE A+++
Sbjct: 76 TYNILINALCKVGRLEDAQGLVEMMQARDCPTDIVTYNTLIHGLCRKGNGRFRVERAFRL 135
Query: 255 FLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
F E D P +S + ++I + + + AQK + M + G + D+V+Y I +
Sbjct: 136 FEEMVDKGHTP-TSVTYTVVIDALLRVKMDEQAQKVLDLMHENGCAFDLVTYNMLINRFA 194
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ K D EM +GC P V+TY V+ KA ++ EA K++ +MK+ P+
Sbjct: 195 KAGMMDKAMDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGR 254
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVV----------------------------- 403
Y+S+ KAGR++DA+ +M+K+G+V
Sbjct: 255 TYTSITDACLKAGRMQDAHAYLVEMRKEGLVDAISYVALISTICKLGKGKLGFQLLREML 314
Query: 404 -----PNVLTYNTMISSACARSEEENA 425
PN++T+N + + S ++A
Sbjct: 315 EKGFKPNLVTFNVVFEALSKESNTDDA 341
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 91/200 (45%), Gaps = 5/200 (2%)
Query: 159 HTPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
HTP Y ++D L + K +++ M E N L T + ++ R + G D A
Sbjct: 144 HTPTSVTYTVVIDALLRVKMDEQAQKVLDLMHE-NGCAFDLVTYNMLINRFAKAGMMDKA 202
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHG 275
++ F M G D + ++D K VE A K+F E K I + + + +
Sbjct: 203 MDLFVEMPTRGCIPDVVTYNSVVDGFCKAGKVEEANKLFAEMKARGIFPNGRTYTSITDA 262
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
K ++ DA + EM ++G D +SY I C+ + L+EM EKG KP+
Sbjct: 263 CLKAGRMQDAHAYLVEMRKEGLV-DAISYVALISTICKLGKGKLGFQLLREMLEKGFKPN 321
Query: 336 VITYTIVMHALGKAKQINEA 355
++T+ +V AL K ++A
Sbjct: 322 LVTFNVVFEALSKESNTDDA 341
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 187/400 (46%), Gaps = 20/400 (5%)
Query: 145 FGFFTW--AKTQTGYMHTPEMYNTMVDVLGK----SKKFCLMWELVKEMDELNNGYVSLA 198
F FFTW + + + HT Y TM+ L S+ L+ +V + + V A
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 199 TMST---------IMRRLVRG----GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
+ T + L+ G G DA+E +R ++ + +++ L+K
Sbjct: 61 ILETKGTQRSDIYVFSGLITGYLESGFLRDAIECYRLTRENKLCVPFDTCRKVLEHLMKL 120
Query: 246 NSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+ + + E +C P S FNIL+H +CK + AQ + + G P VVSY
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ Y R D + M G +P V TY+++++ L K ++++A K++++M
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLV 240
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
+P+ +++LI K GRV A EI++ M Q ++P+++TYNT+I C + + +
Sbjct: 241 KALVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQ 300
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A L+ +M +PD TY L+ CC++ + M + ++ +D Y +L+
Sbjct: 301 ANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
GL + G+ A EM+S G+ P TY M+ + KK
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKK 400
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 130/255 (50%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K N ++ A K+F
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLF 235
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K +P + F LI G CK +VD A + K+M Q PD+++Y I C+
Sbjct: 236 DEMLVKALVP-NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK 294
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ +D + EM KG +P ITYT ++ K ++ A + ++M ++ D
Sbjct: 295 KGDLKQANDLIDEMSMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 354
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P+ TY +I+ C + + KLL++M+
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 434 EDLCKPDCETYAPLL 448
D P TY L+
Sbjct: 415 RDGHVPSVVTYNVLM 429
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 152/348 (43%), Gaps = 37/348 (10%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W +E+ L GY SL + +M R + G A F + K+G+
Sbjct: 117 LMKLKYFKLVWGFYEEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLR 174
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ +N L++G+ + +D+ +
Sbjct: 175 PSVVS----------------------------------YNTLMNGYIRLGDLDEGFRLK 200
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
M G PDV +Y+ I C+E + EM K P+ +T+T ++ K
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKN 260
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+++ A+++Y++M S LPD Y++LI+ L K G +K AN++ ++M +G+ P+ +TY
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITY 320
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
T+I C + + A + ++M ++ + D Y L+ C++ R +L M
Sbjct: 321 TTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 380
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ DA TY ++ + G + +EM G VP TY +L
Sbjct: 381 VGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/331 (28%), Positives = 161/331 (48%), Gaps = 5/331 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMK--KYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+ S ++ + G DAVE +R + K+ V DT +++ LVK +
Sbjct: 66 IYVFSGLITAYLESGFLRDAVECYRLTREHKFWVPFDT--CKKMLEHLVKLKYFNLVWAF 123
Query: 255 FLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ E +C P S FNIL+H +CK + AQ + + G P VVSY + Y R
Sbjct: 124 YEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIR 183
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D + M G +P V TY+++++ L K ++++A +++E+M +P+
Sbjct: 184 LGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVT 243
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+++LI K GRV A E+++ M Q ++P+++TYNT+I C + A L+ +M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMS 303
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
KPD TY L+ CC++ + M + ++ +D Y +L+ GL + G+
Sbjct: 304 MKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSV 363
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
A EM+S G+ P TY M+ + KK
Sbjct: 364 DAEKMMREMLSFGLKPDTGTYTMIINEFCKK 394
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 152/344 (44%), Gaps = 37/344 (10%)
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKK 225
M++ L K K F L+W +E+ L GY SL + +M R + G A F + K
Sbjct: 107 MLEHLVKLKYFNLVWAFYEEI--LECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITK 164
Query: 226 YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDA 285
+G+ + +N L++G+ + +++
Sbjct: 165 WGLRPSVVS----------------------------------YNTLMNGYIRLGDLNEG 190
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
K M G PDV +Y+ I C+E ++ +EM KG P+ +T+T ++
Sbjct: 191 FKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGVTFTTLIDG 250
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K +++ A++VY++M S LPD Y++LI+ L K G + A+++ ++M +G+ P+
Sbjct: 251 HCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPD 310
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
+TY T+I C + + A + ++M ++ + D Y L+ C++ R ++
Sbjct: 311 KITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMR 370
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
M + D GTY ++ + G + +EM G P
Sbjct: 371 EMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAP 414
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 125/250 (50%), Gaps = 3/250 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G ++ + M GV+ D SVL++ L K + ++ A ++F
Sbjct: 170 SVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 229
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K +P + F LI G CK +VD A + K+M Q PD+++Y I C+
Sbjct: 230 EEMLVKGLVP-NGVTFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCK 288
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + D + EM KG KP ITYT ++ K ++ A + ++M ++ D
Sbjct: 289 KGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 348
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P+ TY +I+ C + + KLL++M+
Sbjct: 349 YTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 408
Query: 434 EDLCKPDCET 443
D P T
Sbjct: 409 RDGHAPSVVT 418
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 167/366 (45%), Gaps = 10/366 (2%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF---- 220
N ++ LG+ + M EL+ EM++ S+ T ++ L + R D+A++ F
Sbjct: 285 NALLTWLGRGRDIKRMNELLAEMEK-RKIRPSVVTFGILVNHLCKARRIDEALQVFDRLR 343
Query: 221 --RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGW 276
G GVE D + L+D L K E + E K + ++ +N LI G+
Sbjct: 344 GKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGF 403
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
K D A + ++M ++G P+V++ ++ C+ + + EM+ KG K +
Sbjct: 404 FKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNA 463
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TYT ++ A IN A++ +E+M S C PD Y SLI L AGR+ DA+ +
Sbjct: 464 ATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSK 523
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
+K G + YN +IS C + + E +LL +MEE KPD TY L+ +
Sbjct: 524 LKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGD 583
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST-YK 515
+ ++ M K + TY +++ ++ F EM S VP ++ Y
Sbjct: 584 FATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYN 643
Query: 516 MLEEKL 521
+L + L
Sbjct: 644 ILIDAL 649
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 165/360 (45%), Gaps = 7/360 (1%)
Query: 146 GFFTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
G + + G ++ P YN ++D K+ F EL ++M+E ++ T++T+
Sbjct: 376 GLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFDRAHELFRQMNE-EGVQPNVITLNTL 434
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDC 261
+ L + GR AVE F MK G++ + + L+ N++ A + F E C
Sbjct: 435 VDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGC 494
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
P + ++ LI G C +++DA + ++ GFS D Y I +C++K +V
Sbjct: 495 SP-DAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVY 553
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ L EM+E G KP ITY ++ LGK A KV EKM + P Y ++I
Sbjct: 554 ELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAY 613
Query: 382 SKAGRVKDANEIFEDM-KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
V + +IF +M V PN + YN +I + C ++ + A+ L++ M+ +P+
Sbjct: 614 CSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPN 673
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY +LK KK + L+ M + D T L L G++E F E
Sbjct: 674 TTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWLSAVGEIEKLKHFVE 733
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 171/410 (41%), Gaps = 48/410 (11%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR------- 212
+P++ + ++ VL KS + ++ EM + N+G+ T + LVR GR
Sbjct: 173 SPQLCHGLLRVLLKSGRAGDALHVLDEMPQANSGFS--VTGEIVFGELVRSGRSFPDGEV 230
Query: 213 ------------YDD-------------------AVEAFRGMKKYGVEKDTRALSVLMDT 241
+ D A E + + G D + + L+
Sbjct: 231 VGLVAKLGERGVFPDGFKLTQLVGKLCGDQKNGVAWEVLHCVMRLGGAVDAASCNALLTW 290
Query: 242 LVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS-- 298
L +G ++ ++ E K I S F IL++ CK R++D+A + + +G S
Sbjct: 291 LGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVFDRLRGKGGSNW 350
Query: 299 ----PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC-KPSVITYTIVMHALGKAKQIN 353
PDVV + I+ C+ L+EM+ +P+ +TY ++ KA +
Sbjct: 351 VGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDGFFKAGNFD 410
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
A +++ +M + P+ ++L+ L K GRV A E F +MK +G+ N TY +I
Sbjct: 411 RAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGNAATYTALI 470
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
S+ C + A++ ++M C PD Y L+ C RM + +++ + S
Sbjct: 471 SAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVSKLKLAGFS 530
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+D Y L+ G + KLE EM G+ P TY L L K
Sbjct: 531 LDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGK 580
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 95/211 (45%), Gaps = 4/211 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++ K KK ++EL+ EM+E ++ T +T++ L + G + A + M
Sbjct: 536 YNVLISGFCKKKKLERVYELLTEMEETGVKPDTI-TYNTLISYLGKTGDFATASKVMEKM 594
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRK 281
K G+ ++ +V+ K+F E +P ++ I+NILI C+
Sbjct: 595 IKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNND 654
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
VD A M++M + P+ +Y ++ +K K + + M E+ C+P IT +
Sbjct: 655 VDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEV 714
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ L +I E LK + + D P +S
Sbjct: 715 LTEWLSAVGEI-EKLKHFVEGYQDSSYPASS 744
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 189/383 (49%), Gaps = 3/383 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY+ Y T+++ L K+ + L++EM++ ++ +L S ++ L + G D
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEK-SSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIH 274
A+ + + G+ D + L+D + ++ + ++ + FNILI
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
CK ++ +AQ + M ++G PD+V+Y +E YC ++ + + M ++G +P
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP 333
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
V+ Y +++ K K ++EA+ +++++ + + +P + Y+SLI L +GR+ ++
Sbjct: 334 DVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLL 393
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M P+V+TYN +I + C AL +L M + KP+ TY ++ C +
Sbjct: 394 DEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR 453
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ V + M K+ + D Y L+ G ++ ++ A F+EM K ++P ++Y
Sbjct: 454 NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASY 513
Query: 515 KMLEEKL-EKKRLGNAKERINKL 536
L + L R+ + +E ++++
Sbjct: 514 NSLIDGLCNLGRIPHVQELLDEM 536
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 159/344 (46%), Gaps = 3/344 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++ L + GR +A M K G + D + LM+ +V A ++F
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K + +N+LI G+CKT+ VD+A KE+ + P + SY I+ C
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
V L EM P V+TY I++ AL K +I EAL V M P+ Y+++
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ V A +IF M K G+ P++L YN +I+ C + A+ L ++M
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD +Y L+ C R+ + LL M + S D TY L+ ++ + A S
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566
Query: 498 FFEEMISKGIVP-YHSTYKMLEEKLEKKRLGNAKERINKLLAHA 540
F +++ +GI P +++ + +++ + ++L A++ + LL H
Sbjct: 567 LFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 180/406 (44%), Gaps = 38/406 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++D L K + L + V M + T + +M +A E F M
Sbjct: 268 FNILIDALCKEGRI-LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPL----------------- 264
K G+E D +VL+D K V+ A +F E K+ +P
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386
Query: 265 ------------SSQ-----IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
S+Q +NILI CK ++ +A + M ++G P++V+Y
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
++ YC + D M + G +P ++ Y ++++ K + ++EA+ ++++M+ +
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
+PD + Y+SLI L GR+ E+ ++M G P+V+TYN ++ + C + A+
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L +++ E + PD T ++ C+ +++K+ L H+ + S + TY L+ L
Sbjct: 567 LFRQIVEGIW-PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ G A +M P T++++ L ++ + E++
Sbjct: 626 KDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL 671
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 138/314 (43%), Gaps = 1/314 (0%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNIL 272
DDAV F M + T L+ +V+ A +F + + I S F IL
Sbjct: 37 DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTIL 96
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I+ + A + + + G+ P++V++ I +C K D + + +G
Sbjct: 97 INCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGY 156
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
TY +++ L K QI AL + ++M+ P+ YS+LI L K G V DA
Sbjct: 157 LFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALG 216
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ + ++G++ + +TYN++I C+ + +LL KM + PD T+ L+ C
Sbjct: 217 LCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALC 276
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
++ R+ +L M K D TY +L+ G + A F M+ +G+ P
Sbjct: 277 KEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVL 336
Query: 513 TYKMLEEKLEKKRL 526
Y +L + K ++
Sbjct: 337 NYNVLIDGYCKTKM 350
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 154/341 (45%), Gaps = 2/341 (0%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDC 261
++ +VR G Y A+ F ++ G+ ++L++ + A+ + K
Sbjct: 61 LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSG 120
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ FN +I+G+C + A + + QG+ D +Y I + +
Sbjct: 121 YQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAAL 180
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L+EM++ +P+++ Y+ ++ L K +++AL + ++ L D Y+SLI
Sbjct: 181 HLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGC 240
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
GR ++ ++ M ++ V P+ T+N +I + C A +L M + KPD
Sbjct: 241 CSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDI 300
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L++ C ++ + L M K + D Y L+ G ++ ++ A F+E
Sbjct: 301 VTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKE 360
Query: 502 MISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAK 541
+ +K +VP ++Y L + L R+ + K+ ++++ A+
Sbjct: 361 LCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 42/287 (14%)
Query: 156 GYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGR 212
G P++ YN ++D L K + ++ M + G ++ T + +M
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMM--MKKGVKPNIVTYNAMMDGYCLRNN 455
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFN 270
+ A + F M K G+E D +VL++ K V+ A +F E K+ IP + +N
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS-YN 514
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV---------- 320
LI G C ++ Q+ + EM G SPDV++Y ++ +C+ + F K
Sbjct: 515 SLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEG 574
Query: 321 ------------------------DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
+D LK + GC P+V TYTI+++AL K EA+
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ KM+ +D PD + +I +L + A ++ E+M +G+V
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
H + + +++A+ + +M P TS + L+ + + G A +F ++ +G+
Sbjct: 28 HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK-MCCRKKRMKVLNF 462
P++ T+ +I+ +S A LL + + +P+ T+ ++ C K L+F
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
++ D TY +L+ GL ++G+++ A +EM + P Y L + L
Sbjct: 148 -CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC 206
Query: 523 K 523
K
Sbjct: 207 K 207
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 152/312 (48%), Gaps = 1/312 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + I L R R ++A F M+K G++ D A S L+D ++ ++ ++
Sbjct: 12 TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM 71
Query: 259 KDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C IP++ +N+LIHG CK K++ A + +K M G P+ ++ IE YCRE +
Sbjct: 72 VSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNM 131
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + L EM+++ PS ++Y +++ L K ++ A K+ EKM P+ YS+L
Sbjct: 132 GRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTL 191
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I + GR+++A + + M GV P++ YN +IS + E A L +++
Sbjct: 192 IMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGL 251
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KPD T+ + + +M M + + + Y L+ G ++G L A S
Sbjct: 252 KPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALS 311
Query: 498 FFEEMISKGIVP 509
F + + G++P
Sbjct: 312 IFRHLHALGVLP 323
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 170/376 (45%), Gaps = 2/376 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y M++ L K L +L+++M + ++ ST++ GR ++A GM
Sbjct: 153 YGAMINGLCHCKDLSLANKLLEKM-TFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 211
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKV 282
GV D + ++ L K +E A LE + + + F I G+ KT K+
Sbjct: 212 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 271
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A K EM G P+ YT I + + + + + + G P V T +
Sbjct: 272 TEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAF 331
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+H L K ++ EALKV+ ++K +PD YSSLI K G V+ A E+ ++M +G+
Sbjct: 332 IHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGI 391
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN+ YN ++ C + + A KL M E +PD TY+ ++ C+ + +
Sbjct: 392 APNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFS 451
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L M V + Y +LV G + G +E A + F EM+ KG S +++ +
Sbjct: 452 LFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCK 511
Query: 523 KKRLGNAKERINKLLA 538
++ A + +++A
Sbjct: 512 SCKIQEASQLFQEMIA 527
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 167/352 (47%), Gaps = 25/352 (7%)
Query: 170 VLGKSKKFCLMWELVKEMDE-LNNGYVSLATMSTIM-RRLVRGGRYDDAVEAFRGMKKYG 227
+LG SK M E K DE L++G + + T++ + G +A+ FR + G
Sbjct: 262 ILGYSKT-GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 320
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI--LIHGWCKTRKVDDA 285
V D + S + L+K V+ A KVF E K+ L +F LI G+CK +V+ A
Sbjct: 321 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE-KGLVPDVFTYSSLISGFCKQGEVEKA 379
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ EM +G +P++ Y ++ C+ D ++ M EKG +P +TY+ ++
Sbjct: 380 FELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDG 439
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
K++ + EA ++ +M S P + Y++L+ K G ++ A +F +M ++G
Sbjct: 440 YCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-T 498
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
L++NT+I C + + A +L Q+M PD TY ++ C+ +M+ N L
Sbjct: 499 TLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFK 558
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M + ++ +D + FE+M++KG+ P TY ++
Sbjct: 559 EMQERNLIVDT------------------VFALFEKMVAKGVKPDEVTYGLV 592
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 156/331 (47%), Gaps = 3/331 (0%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
++L T + ++ L + G+ + A E +GM G + ++R +L++ + +++ A ++
Sbjct: 78 INLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALEL 137
Query: 255 F--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+E ++ +P S+ + +I+G C + + A K +++M G P+VV Y+ I Y
Sbjct: 138 LDEMEKRNLVP-SAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYA 196
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
E + L M G P + Y ++ L KA ++ EA +++ PD
Sbjct: 197 SEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 256
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
+ + I SK G++ +A + F++M G++PN Y +I+ AL + + +
Sbjct: 257 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 316
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
PD +T + + + R++ + + + + + D TY+SL+ G + G++
Sbjct: 317 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEV 376
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
E A +EM KGI P Y L + L K
Sbjct: 377 EKAFELHDEMCLKGIAPNIFIYNALVDGLCK 407
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 167/369 (45%), Gaps = 56/369 (15%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE- 257
T S + L++ GR +A++ F +K+ G+ D S L+ K VE A+++ E
Sbjct: 327 TCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEM 386
Query: 258 -FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K P + I+N L+ G CK+ + A+K M ++G PD V+Y+ I+ YC+ ++
Sbjct: 387 CLKGIAP-NIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSEN 445
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ EM KG +P Y ++H K + +A+ ++ +M SF ++
Sbjct: 446 VAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSF-NT 504
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC--ARSEEENAL-------- 426
LI K+ ++++A+++F++M + ++P+ +TY T+I C + EE N L
Sbjct: 505 LIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERN 564
Query: 427 -------KLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-------------------KVL 460
L +KM KPD TY ++ C++ + +
Sbjct: 565 LIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIH 624
Query: 461 NFLLTHMFKNDVSMDA----------------GTYASLVRGLIESGKLELACSFFEEMIS 504
+ L+T + K + +A ++LVR E+GK++ A FE + S
Sbjct: 625 DLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKS 684
Query: 505 KGIVPYHST 513
G+VP +T
Sbjct: 685 LGLVPDTTT 693
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 102/205 (49%), Gaps = 6/205 (2%)
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M EKG P+ TYTI+ L +AK++NEA +E+M+ PD + S+LI + G
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ + I + M G+ N++TYN +I C + E A ++L+ M CKP+ T+
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L++ CR+ M LL M K ++ A +Y +++ GL L LA E+M G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Query: 507 IVPYHSTYKML------EEKLEKKR 525
+ P Y L E ++E+ R
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEAR 205
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 138/303 (45%), Gaps = 18/303 (5%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YN +VD L KS +L M E S+ T ST++ + +A F
Sbjct: 397 IYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSV-TYSTMIDGYCKSENVAEAFSLFHE 455
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
M GV+ + + L+ K +E A +F E ++ FN LI G+CK+ K+
Sbjct: 456 MPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKI 515
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE------------- 329
+A + +EM + PD V+YT I+ +C+ + + KEMQE
Sbjct: 516 QEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFE 575
Query: 330 ----KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
KG KP +TY +V++A K + EA K+ +++ L + + LI L K
Sbjct: 576 KMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRE 635
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ +A+++ ++M + G+ P++ +T++ S + + A ++ + ++ PD T
Sbjct: 636 DLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLI 695
Query: 446 PLL 448
L+
Sbjct: 696 DLV 698
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 100/218 (45%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M ++G P+ +YT CR K + T +EMQ+ G KP + ++ +
Sbjct: 1 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
I+E L++ + M S + Y+ LI L K G+++ A EI + M G PN T+
Sbjct: 61 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I C AL+LL +ME+ P +Y ++ C K + + N LL M +
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ + Y++L+ G G++E A + M G+ P
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAP 218
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 148/288 (51%), Gaps = 9/288 (3%)
Query: 238 LMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQ 295
L+ L K N + ++ E + LS +F +IL + C +V +A AM + ++
Sbjct: 97 LLGGLAKINHYSQLFSLYNEMR-LAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILRR 155
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G+ P+VV+YT I+ C E + MQ+ GC P+ +TY ++ L + +N A
Sbjct: 156 GYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIA 215
Query: 356 LKVYEKMKSD------DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
LK++++M +D +C P YS +I L K GR +A E+FE+MK QG++P+V++Y
Sbjct: 216 LKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISY 275
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
+T+I C + + + L +M + +PD T++ L+ C++ ++ LL M +
Sbjct: 276 STLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQ 335
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + TY SL+ G G L A F M SKG+ P +Y L
Sbjct: 336 RGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTL 383
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/357 (28%), Positives = 169/357 (47%), Gaps = 39/357 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ ++D L K + EL +EM G + + + ST++ G++D + F
Sbjct: 240 YSIIIDGLCKVGREDEAKELFEEMKA--QGMIPDVISYSTLIHGFCCAGKWDQSKHLFDE 297
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRK 281
M GV+ D SVL+DTL K V A K+ + + I + +N LI G+C
Sbjct: 298 MVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGD 357
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++ A++ M +G PD +SYT I YC+ ++ + EM + G P+V TY
Sbjct: 358 LNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGT 417
Query: 342 VMHALGKAKQINEALKVYEKMKS-------------------DDCL-------------- 368
++ L + ++ +A K++ MK+ +DCL
Sbjct: 418 LLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYN 477
Query: 369 --PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+ YS LI L KAG+++ A E+FE + ++G+ P+V+TYN MI C + +NA
Sbjct: 478 FKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNAN 537
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
L +KMEE+ C PD Y LL C +++ + LL M + DVS +A + +V
Sbjct: 538 ILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVV 594
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 178/389 (45%), Gaps = 14/389 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELN-------NGYVSLATMSTIMRRLVRGGRYDDA 216
Y T++ L ++ + +L KEM LN N + T S I+ L + GR D+A
Sbjct: 199 YGTLIKGLCQTGNVNIALKLHKEM--LNDASQYGVNCKPGVITYSIIIDGLCKVGREDEA 256
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHG 275
E F MK G+ D + S L+ + + +F E D + F++LI
Sbjct: 257 KELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDT 316
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
CK KV +A+K ++ M Q+G P++++Y I+ +C D + M KG +P
Sbjct: 317 LCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPD 376
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
I+YT +++ K ++ EA+ +Y +M P+ + Y +L+ L + G+V DA ++F
Sbjct: 377 EISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFG 436
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
MK GV N Y + C A++L +++ K + E Y+ L+ C+
Sbjct: 437 VMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAG 496
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+++ L + + + D TY ++ G + G+++ A FE+M G P Y
Sbjct: 497 KLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYN 556
Query: 516 MLEEKLEKKRLGNAKERINKLLAHAKEQK 544
L + GN E + KLL H QK
Sbjct: 557 TLLCGFCE---GNKLEEVIKLL-HKMVQK 581
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/373 (26%), Positives = 178/373 (47%), Gaps = 16/373 (4%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY+ Y T++ L + L M +L + T T+++ L + G +
Sbjct: 156 GYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLG-CTPNAVTYGTLIKGLCQTGNVNI 214
Query: 216 AVEAFRGM----KKYGV--EKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI- 268
A++ + M +YGV + S+++D L K + A ++F E K + I
Sbjct: 215 ALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVIS 274
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
++ LIHG+C K D ++ EM QG PD+V+++ I+ C+E + L+ M
Sbjct: 275 YSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMI 334
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
++G P++ITY ++ +N A +++ M S PD Y++LI K +VK
Sbjct: 335 QRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVK 394
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A ++ +M + G PNV TY T++ + + +A KL M+ + + Y L
Sbjct: 395 EAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454
Query: 449 KMCCRK----KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
C+ + M++ N L ++ FK ++ Y+ L+ GL ++GKLE A FE++
Sbjct: 455 DGLCKNDCLFEAMELFNELKSYNFKLNIE----NYSCLIDGLCKAGKLETAWELFEKLSQ 510
Query: 505 KGIVPYHSTYKML 517
+G+ P TY ++
Sbjct: 511 EGLQPDVVTYNIM 523
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 148/303 (48%), Gaps = 8/303 (2%)
Query: 161 PEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAV 217
P+M ++ ++D L K K +L++ M + G V +L T ++++ G + A
Sbjct: 305 PDMVTFSVLIDTLCKEGKVTEAKKLLEVM--IQRGIVPNLITYNSLIDGFCMVGDLNSAR 362
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHG 275
E F M G+E D + + L++ K V+ A ++ E + S + + L+ G
Sbjct: 363 ELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQ-VGKSPNVTTYGTLLKG 421
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
+ KV DA+K M G S + Y F++ C+ + + E++ K +
Sbjct: 422 LFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLN 481
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ Y+ ++ L KA ++ A +++EK+ + PD Y+ +I K G+V +AN +FE
Sbjct: 482 IENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFE 541
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M++ G P+++ YNT++ C ++ E +KLL KM + P+ + ++ M C+ +
Sbjct: 542 KMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDE 601
Query: 456 RMK 458
+ K
Sbjct: 602 KYK 604
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 115/256 (44%), Gaps = 8/256 (3%)
Query: 277 CKTRKVDDAQKA--MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
CKT + Q M + P + S+ + + + ++ EM+ G P
Sbjct: 65 CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ T +I+ + L +++EAL + +P+ Y++LI L R+ +A +F
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL------CKPDCETYAPLL 448
M+K G PN +TY T+I C ALKL ++M D CKP TY+ ++
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIII 244
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+ R L M + D +Y++L+ G +GK + + F+EM+ +G+
Sbjct: 245 DGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQ 304
Query: 509 PYHSTYKMLEEKLEKK 524
P T+ +L + L K+
Sbjct: 305 PDMVTFSVLIDTLCKE 320
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 122/274 (44%), Gaps = 47/274 (17%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV------SLATMSTIMRRLVRGGRYDDAV 217
Y T+++ +C W+ VKE L N + ++ T T+++ L + G+ DA
Sbjct: 380 YTTLIN------GYCKTWK-VKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAK 432
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWC 277
+ F MK YGV + SQI+ I + G C
Sbjct: 433 KLFGVMKTYGVSAN----------------------------------SQIYGIFLDGLC 458
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K + +A + E+ F ++ +Y+C I+ C+ + +++ ++G +P V+
Sbjct: 459 KNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVV 518
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY I++H K Q++ A ++EKM+ + C PD Y++L+ + ++++ ++ M
Sbjct: 519 TYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKM 578
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
++ V PN + ++ C + + + LL K
Sbjct: 579 VQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPK 612
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/357 (27%), Positives = 172/357 (48%), Gaps = 6/357 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y T+V L K ++F E++ EM E G+V S A +S ++ L + G A +
Sbjct: 288 YCTLVLGLCKVEEFEAGEEMMNEMIEF--GFVPSEAAVSNLVDGLRKKGNIGSAFDLVNK 345
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
+KK+GV + L++++ K ++ A +F + K P + ++ILI +CK
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFP-NDVTYSILIDSFCKRG 404
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+D A + +M + G V Y+ I +C+ R EM G KP+V+ YT
Sbjct: 405 KLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYT 464
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K +++ A ++Y +M P+T +++LI L A R+ +AN++F +M +
Sbjct: 465 SLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEW 524
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
V+PN +TYN +I C A +LL +M E PD TY PL+ C R+
Sbjct: 525 NVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEA 584
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + ++ +++L+ G + G+L+ A EM+ +G+ Y +L
Sbjct: 585 REFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVL 641
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 152/337 (45%), Gaps = 35/337 (10%)
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIH 274
A E M + G+ DT L+ L V A + + + + L+ F+ L+H
Sbjct: 549 AFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLH 608
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+CK ++DDA A +EM +G + D+V Y+ I R++D R + D LK+M ++G +P
Sbjct: 609 GYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRP 668
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI- 393
+ YT ++ A KA + A +++ M S+ CLP+ Y++LI L K G + A +
Sbjct: 669 DNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLC 728
Query: 394 ---------------------------------FEDMKKQGVVPNVLTYNTMISSACARS 420
D+ +G + N +TYN +I C
Sbjct: 729 REMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLG 788
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+ A ++L M + PDC +Y+ ++ CR+ +K L M V+ D Y
Sbjct: 789 RIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYN 848
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L+ G +G+L A ++M+ +G+ P +TY L
Sbjct: 849 FLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSL 885
Score = 132 bits (331), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 160/349 (45%), Gaps = 8/349 (2%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF- 255
+ T+S ++ L+R ++ A+ F + G+ D + ++ +L + A +V
Sbjct: 180 IRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIG 239
Query: 256 -LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+E C LS +N+ I G CK ++V +A + + +G DV +Y + C+
Sbjct: 240 RMESSGC-DLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKV 298
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
++F ++ + EM E G PS + ++ L K I A + K+K P Y
Sbjct: 299 EEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVY 358
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI + K G++ +A +F +M +G+ PN +TY+ +I S C R + + AL L KM E
Sbjct: 359 NALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE 418
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
K Y+ L+ C+ +++ L M N + + Y SL+ G + G+L
Sbjct: 419 VGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN 478
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAKE 542
A + EM KGI P T+ L L R+ A NKL E
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA----NKLFGEMVE 523
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 170/376 (45%), Gaps = 4/376 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G++ + + +VD L K ++LV ++ + SL + ++ + + G+ D+
Sbjct: 315 GFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVA-PSLFVYNALINSMCKDGKLDE 373
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIH 274
A F M G+ + S+L+D+ K ++ A + + I + ++ LI
Sbjct: 374 AESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLIS 433
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G CK K+ A+ EM G P+VV YT I YC+E + EM KG P
Sbjct: 434 GHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISP 493
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ T+T ++ L A ++ EA K++ +M + +P+ Y+ LI K G A E+
Sbjct: 494 NTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELL 553
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M ++G+VP+ TY +IS C+ A + + ++ + K + ++ LL C++
Sbjct: 554 DEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKE 613
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
R+ M V+MD Y+ L+ G++ ++M +G+ P + Y
Sbjct: 614 GRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLY 673
Query: 515 KMLEEKLEKKRLGNAK 530
+ + + GN K
Sbjct: 674 TTMIDA--NAKAGNLK 687
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 159/382 (41%), Gaps = 41/382 (10%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEF 258
+ ++R L + A E M+ G + +V + L K V A ++ L +
Sbjct: 219 TAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSY 278
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP------------------- 299
K + + L+ G CK + + ++ M EM + GF P
Sbjct: 279 KG-LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIG 337
Query: 300 ---DVVS-------------YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
D+V+ Y I C++ + + M KG P+ +TY+I++
Sbjct: 338 SAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILI 397
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ K +++ AL KM YSSLI K G+++ A +F++M G+
Sbjct: 398 DSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLK 457
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
PNV+ Y ++IS C E NA +L +M P+ T+ L+ C RM N L
Sbjct: 458 PNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKL 517
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-E 522
M + +V + TY L+ G + G A +EM+ KG+VP TY+ L L
Sbjct: 518 FGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCS 577
Query: 523 KKRLGNAKERINKLLAHAKEQK 544
R+ A+E +N L ++QK
Sbjct: 578 TGRVSEAREFMNDL--QGEQQK 597
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/371 (22%), Positives = 169/371 (45%), Gaps = 4/371 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++D K K + + +M E+ ++ S+++ + G+ A F M
Sbjct: 393 YSILIDSFCKRGKLDVALHFLGKMTEVGIK-ATVYPYSSLISGHCKLGKLRAAKSLFDEM 451
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKV 282
G++ + + L+ K + +A++++ E I ++ F LI G C ++
Sbjct: 452 IANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRM 511
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A K EM + P+ V+Y IE +C+E + + + L EM EKG P TY +
Sbjct: 512 AEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L +++EA + ++ + + +S+L+ K GR+ DA + +M +GV
Sbjct: 572 ISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGV 631
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+++ Y+ +I + + + + LL++M + +PD Y ++ + +K+
Sbjct: 632 AMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFG 691
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L M + TY +L+ GL + G ++ A EM++ +P +TY + L
Sbjct: 692 LWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLT 751
Query: 523 KKRLGNAKERI 533
+ GN ++ I
Sbjct: 752 SE--GNIEKAI 760
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 122/260 (46%), Gaps = 4/260 (1%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+ L S ++ ++R ++ + M G+ D + ++D K +++ A+ +
Sbjct: 633 MDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGL 692
Query: 255 F--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ + + C+P + + LI+G CK +D A+ +EM P+ +Y CF+++
Sbjct: 693 WDIMVSEGCLP-NVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLT 751
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
E + K L ++ +G + +TY I++ K +I EA +V M PD
Sbjct: 752 SEGNIEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCI 810
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
YS++I+ + G +K+A +++E M +GV P+ + YN +I C E A +L M
Sbjct: 811 SYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDM 870
Query: 433 EEDLCKPDCETYAPLLKMCC 452
KP+ TY L+ C
Sbjct: 871 MRRGVKPNRATYNSLIHGTC 890
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 145/333 (43%), Gaps = 22/333 (6%)
Query: 214 DDAVEAFRGMKKYGVEKD----TRALSVLMDTLVKGN-----------------SVEHAY 252
DD+ A R G+ K+ T + +L+ LV+ N + E +
Sbjct: 71 DDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLF 130
Query: 253 KVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
+ FL+ ++ C ++ F++LI + + R+ D ++ M G P + + + +
Sbjct: 131 ESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGL 190
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
R + FR E+ G +P V YT V+ +L + K A +V +M+S C
Sbjct: 191 IRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSV 250
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
+ Y+ I L K RV +A EI + +G+ +V TY T++ C E E +++ +
Sbjct: 251 ATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNE 310
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M E P + L+ +K + L+ + K V+ Y +L+ + + GK
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
L+ A S F M KG+ P TY +L + K+
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKR 403
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/219 (22%), Positives = 99/219 (45%), Gaps = 7/219 (3%)
Query: 163 MYNTMVDVLGKSKKFCL---MWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
+Y TM+D K+ + +W+++ L N + T + ++ L + G D A
Sbjct: 672 LYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPN----VVTYTALINGLCKIGLMDKAELL 727
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKT 279
R M + + +D L ++E A ++ + ++ +NILI G+CK
Sbjct: 728 CREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKL 787
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++ +A + + M G SPD +SY+ I YCR D ++ + M +G P + Y
Sbjct: 788 GRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAY 847
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+++ ++ +A ++ + M P+ + Y+SLI
Sbjct: 848 NFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLI 886
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/384 (25%), Positives = 177/384 (46%), Gaps = 11/384 (2%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N ++ L K+K++ + L K+ E N L T+S ++ A F
Sbjct: 63 LFNNILSSLVKNKRYPTVISLFKQF-EPNGITPDLCTLSILINCFCHLTHITFAFSVFAN 121
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI-----PLSSQIFNILIHGWC 277
+ K G + ++ ++TL+KG K L F D + L + LI+G C
Sbjct: 122 ILKRGYHPN----AITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLC 177
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K + + ++++ PD+V YT I C+ K D EM KG P+V
Sbjct: 178 KAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVF 237
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYT ++H + EA + +MK + PD ++ LI L+K G++ +A +FE+M
Sbjct: 238 TYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
K + + PN++TY ++I C E A+ L +KM+E +P+ +Y LL C+ R+
Sbjct: 298 KHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRL 357
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-M 516
+ H+ ++ TY ++ GL ++G +M KG +P T+K +
Sbjct: 358 ENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTI 417
Query: 517 LEEKLEKKRLGNAKERINKLLAHA 540
+ LEK A++ + +++A
Sbjct: 418 ICALLEKDENDKAEKFLREMIARG 441
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 118/281 (41%), Gaps = 3/281 (1%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P + +FN ++ K ++ K+ G +PD+ + + I +C
Sbjct: 58 PPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFS 117
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+ ++G P+ IT ++ L +I AL ++K+ + D Y +LI L
Sbjct: 118 VFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLC 177
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
KAG K + ++ V P+++ Y T+I C +A L +M P+
Sbjct: 178 KAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVF 237
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ C +K LL M +++ D T+ L+ L + GK++ A S FEEM
Sbjct: 238 TYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEM 297
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
K + P TY L + L K + ER L KEQ
Sbjct: 298 KHKNMFPNIVTYTSLIDGLCKN---HHLERAIALCKKMKEQ 335
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 101/241 (41%)
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
DA + M P + + + K + V K+ + G P + T +I++
Sbjct: 44 DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ I A V+ + P+ ++LI L G +K A + + QG
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQ 163
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
+ ++Y T+I+ C E + +LL+K+E KPD Y ++ C+ K + L
Sbjct: 164 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDL 223
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ M +S + TY +L+ G G L+ A S EM K I P T+ +L + L K
Sbjct: 224 YSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283
Query: 524 K 524
+
Sbjct: 284 E 284
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 110/243 (45%), Gaps = 4/243 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
MY T++ L K+K +L EM + ++ T +T++ G +A
Sbjct: 203 MYTTIIHCLCKNKLLGDACDLYSEMI-VKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNE 261
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
MK + D ++L+D L K ++ A +F ++ K+ P + + LI G CK
Sbjct: 262 MKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFP-NIVTYTSLIDGLCKNH 320
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ A K+M +QG P+V SYT ++ C+ + + KG +V TY
Sbjct: 321 HLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYN 380
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++++ L KA + + + KM+ C+P+ + ++I L + A + +M +
Sbjct: 381 VMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIAR 440
Query: 401 GVV 403
G++
Sbjct: 441 GLL 443
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/410 (26%), Positives = 188/410 (45%), Gaps = 9/410 (2%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWA-KTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVK 185
N LV R+ + DL A F +A K + H + Y+ ++ L +++ F + L+
Sbjct: 53 NRLVAMIRRQQNLDL--ALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRARAFEPVESLLL 110
Query: 186 EMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
E+ + + S T++R R A++ F ++ +GV + R+L+ L++ LV+
Sbjct: 111 ELQD-SGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRSLNTLLNALVQN 169
Query: 246 NSVEHAYKVFLEFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
N + +F K + +F NILI CK V+ A+K EM G P+VV+
Sbjct: 170 NRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEMPSMGIVPNVVT 229
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
YT + Y D E+ + G P TYTI+M K + +A+KV ++M+
Sbjct: 230 YTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTILMDGYVKQGRFTDAVKVMDEME 289
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
+ P+ Y +I K + +A + DM ++ +PN +I C +
Sbjct: 290 ENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCKVIDVLCGEGRVK 349
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A K+ +K+ + C PD + L+ C++ + L + +S TY +L+
Sbjct: 350 EACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTIS-SLLTYNTLI 408
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
G+ E G+L A +++M+ KG VP TY ML + K +G AKE I
Sbjct: 409 AGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLK--VGKAKEVI 456
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/411 (25%), Positives = 194/411 (47%), Gaps = 5/411 (1%)
Query: 105 SKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT-GYMHTPEM 163
++ ++ + ++ L+ G++ S L +R + P T+ + QT G +
Sbjct: 99 ARAFEPVESLLLELQDSGINCSEDLFITVIRSYGLASRPKMALKTFLRIQTFGVRRSVRS 158
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
NT+++ L ++ +F + L K ++ T + +++ L + + A + F M
Sbjct: 159 LNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDVEGARKVFDEM 218
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
G+ + + ++ V + A +VF E D +P + + IL+ G+ K +
Sbjct: 219 PSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLP-DATTYTILMDGYVKQGR 277
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
DA K M EM + G P+ ++Y I YC+E+ + + L +M EK P+
Sbjct: 278 FTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKYIPNSALCCK 337
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V+ L ++ EA K++EK+ +C PD + S+LI L K G + +A ++F + ++ G
Sbjct: 338 VIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFER-G 396
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ ++LTYNT+I+ C E A +L M E C P+ TY L+K + + K +
Sbjct: 397 TISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVI 456
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
++ M ++ TY LV GL++ GK E + +IS G V + +
Sbjct: 457 KVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGAVDFKA 507
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 3/187 (1%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
GR +A + + + K D S L+ L K ++ A K+F EF+ S +N
Sbjct: 346 GRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARKLFNEFERGTISSLLTYN 405
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI G C+ ++ +A + +M ++G P+ +Y I+ + + ++V ++EM +K
Sbjct: 406 TLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLKVGKAKEVIKVVEEMLDK 465
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
GC + TY I++ L K + E L + + S + F + +F+ V +
Sbjct: 466 GCLLNESTYLILVEGLLKLGKREELLNILSMIISSGAV---DFKAWNLFVPHFVSNVNEQ 522
Query: 391 NEIFEDM 397
I E +
Sbjct: 523 ANILEKI 529
>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1016
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 179/351 (50%), Gaps = 4/351 (1%)
Query: 192 NGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEH 250
NG++ + T S+I+ L + GR +A E R MKK GV+ + A + L+D+L K S
Sbjct: 267 NGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWE 326
Query: 251 AYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
A+ + + L + L+ G K+ K +A+ + + + P+ ++YT I+
Sbjct: 327 AFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALID 386
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
YC+ D +V+ L+EM+EK P+VITY+ +++ K ++EA+ V +KM + +P
Sbjct: 387 GYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIP 446
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ Y+ LI KAG+ + A +++ +MK G+ N + ++ ++++ + A +LL
Sbjct: 447 NAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELL 506
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
+ + D Y L+ + + ++ M + + D TY L+ GL+E
Sbjct: 507 KDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEH 566
Query: 490 GKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKLLAH 539
GK E A S + MI G+ P +TY M++ ++ L NA E N++ +H
Sbjct: 567 GKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSH 616
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/372 (24%), Positives = 180/372 (48%), Gaps = 21/372 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAFRG 222
+NT++D K+ + L +LV+ M + G +S + + +T++ + G YD A
Sbjct: 150 FNTLIDGYCKAGEMSLALDLVERMRK--EGLLSDIVSYNTLINGFCKRGEYDKAKSLLHE 207
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTR 280
+ + KD+ ++ D +K + D + L + + + +I +CK
Sbjct: 208 ISESRGVKDSVFFNI--DDRIKKD-------------DNLNLEADLITYTTIISTYCKQH 252
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+++A+ +EM GF PDVV+Y+ + C++ + + L+EM++ G P+ + YT
Sbjct: 253 GLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYT 312
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ +L KA EA ++ D ++L+ L K+ + K+A ++F + K
Sbjct: 313 TLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKL 372
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
++PN +TY +I C + E LLQ+MEE P+ TY+ ++ +K +
Sbjct: 373 NLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEA 432
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
++ M ++ +A YA L+ G ++GK E+A + EM G+ + + +L
Sbjct: 433 INVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNN 492
Query: 521 LEK-KRLGNAKE 531
L++ KR+ A+E
Sbjct: 493 LKRGKRMDEAEE 504
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 187/388 (48%), Gaps = 40/388 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDE--LNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
Y ++D K + L++EM+E +N + T S+I+ + G D+A+ +
Sbjct: 381 YTALIDGYCKVGDMERVESLLQEMEEKHINPNVI---TYSSIINGYTKKGILDEAINVMK 437
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTR 280
M + + ++L+D K E A ++ E K + +++ +F++L++ + +
Sbjct: 438 KMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGK 497
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK---------- 330
++D+A++ +K++ +G D V+YT ++ + + + ++EM EK
Sbjct: 498 RMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYN 557
Query: 331 ------------------------GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
G P+ TY I++ A K +++ AL+++ +MKS
Sbjct: 558 VLINGLLEHGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHK 617
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+P + ++L+ LS+AG ++ A + +M G+ PN++ + +++++ + L
Sbjct: 618 IMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVL 677
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
++ +++ + K + E Y L+ + CR + K +L +M ++ D TY +L+RG
Sbjct: 678 QMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGY 737
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTY 514
ES ++ A + + +M+++G+ P TY
Sbjct: 738 CESSHVKKALATYTQMLNEGVSPNIVTY 765
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 179/411 (43%), Gaps = 39/411 (9%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+Y ++D K+ K + +L EM +L+ V+ ++ L RG R D+A E +
Sbjct: 450 VYAILIDGYCKAGKQEIATDLYNEM-KLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKD 508
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRK 281
+ G+ D + LMD K A + E + IP +N+LI+G + K
Sbjct: 509 VTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGK 568
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF------------------------ 317
+ A+ M + G +P+ +Y I+ YC++ +
Sbjct: 569 YE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNT 627
Query: 318 -----------RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
K + L EM G P+++ + ++++A K+ + N L+++E++
Sbjct: 628 LVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMG 687
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+ Y++LI + + K A + + M + G V + +TYN +I C S + AL
Sbjct: 688 LKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKAL 747
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+M + P+ TY LL M + L M +N ++ DA TY +L+ G
Sbjct: 748 ATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGY 807
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
+ G + + + EM+++G VP STY +L K ++ A+E +N++
Sbjct: 808 GKIGNKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEM 858
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 165/391 (42%), Gaps = 26/391 (6%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G YN M+ K + EL EM + S T +T++ L G
Sbjct: 580 EMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKS-HKIMPSSITCNTLVVGLSEAGEI 638
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNIL 272
+ A+ M G+ + VL++ K ++ + D + ++ + +N L
Sbjct: 639 EKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNL 698
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I +C+ R A +K M + GF D V+Y I YC +K T +M +G
Sbjct: 699 IVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGV 758
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P+++TY +++ L A + E ++++KMK + PD S Y +LI K G K++
Sbjct: 759 SPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIR 818
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
++ +M QG VP TYN +IS + + A +LL +M+ P TY L+ C
Sbjct: 819 LYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILICGWC 878
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+ L+ L +++ D A + EM KG VP S
Sbjct: 879 NLSKHPDLDRTLKKIYRTD-----------------------AKNLITEMNDKGFVPCKS 915
Query: 513 TYKMLEEKLEK-KRLGNAKERINKLLAHAKE 542
T + + ++ +A++ + ++ +HA +
Sbjct: 916 TIACISSTFARPGKMLDAEKLLKEIFSHANK 946
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 171/369 (46%), Gaps = 7/369 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDEL--NNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
Y T++D L K+ WE +L + L +T++ L + + +A + FR
Sbjct: 311 YTTLIDSLFKAGS---AWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFR 367
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTR 280
+ K + ++ + L+D K +E + E ++ I + ++ +I+G+ K
Sbjct: 368 ALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKG 427
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+D+A MK+M Q P+ Y I+ YC+ D EM+ G K + + +
Sbjct: 428 ILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFD 487
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++++ L + K+++EA ++ + + S L D Y+SL+ KAG+ A + E+M ++
Sbjct: 488 VLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEK 547
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ +V+TYN +I+ + E A + M E P+ TY ++K C++ +
Sbjct: 548 SIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNA 606
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
L M + + + T +LV GL E+G++E A + EM GI P +++L
Sbjct: 607 LELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNA 666
Query: 521 LEKKRLGNA 529
K NA
Sbjct: 667 SSKSGKANA 675
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 120/283 (42%), Gaps = 24/283 (8%)
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+P + N+L+H WCK + A ++ + D V+Y I +C+ +
Sbjct: 41 VPPNVYTHNVLVHAWCKMGNLILALDLLRNV---DVEVDTVTYNTVIWGFCQHGLVNQAF 97
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L M +K IT I++ + ++ + + S D +++LI
Sbjct: 98 GFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGY 157
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL----- 436
KAG + A ++ E M+K+G++ ++++YNT+I+ C R E + A LL ++ E
Sbjct: 158 CKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDS 217
Query: 437 ----------------CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
+ D TY ++ C++ ++ L M N D TY+
Sbjct: 218 VFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYS 277
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
S+V GL + G+L A EM G+ P H Y L + L K
Sbjct: 278 SIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFK 320
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 117/302 (38%), Gaps = 60/302 (19%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M + P ++ + I H+ +V D EM P+V T+ +++HA K
Sbjct: 1 MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIF-------------------------------I 380
+ AL + +++ D DT Y+++I+ I
Sbjct: 61 LILALDL---LRNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117
Query: 381 LSKA----GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L K G K I +++ G +V+ +NT+I C E AL L+++M ++
Sbjct: 118 LVKGFCRIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEG 177
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHM----------FKN-----------DVSMD 475
D +Y L+ C++ LL + F N ++ D
Sbjct: 178 LLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEAD 237
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERIN 534
TY +++ + LE A + +EEMI G +P TY + L K RL A+E +
Sbjct: 238 LITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLR 297
Query: 535 KL 536
++
Sbjct: 298 EM 299
>gi|224063295|ref|XP_002301082.1| predicted protein [Populus trichocarpa]
gi|222842808|gb|EEE80355.1| predicted protein [Populus trichocarpa]
Length = 509
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/387 (26%), Positives = 193/387 (49%), Gaps = 8/387 (2%)
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM-DELN 191
L + D A F Q G+ H Y+T++D L ++KKF + L+++M E
Sbjct: 55 NLIKHERDPQHALEIFNLVVEQKGFNHNHATYSTIIDKLARAKKFQAVDALLRQMMYETC 114
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT-RALSVLMDTLVKGNSVEH 250
+ SL +M+ + ++ VE F ++ EK + +A+S ++ LV+ V+
Sbjct: 115 KFHESL--FLNLMKYFAKSSEFERVVEMFNKIQPIVREKPSLKAISTCLNLLVESKQVDL 172
Query: 251 AYKVFLEF-KD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS-PDVVSYTCF 307
L+ KD + ++ IFNI I CK+ ++ A +KEM + S P++++Y+
Sbjct: 173 LRGFLLDLNKDHMLKPNTCIFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTL 232
Query: 308 IEHYCREKDFRKVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
++ C ++ + +EM K P +TY ++++ +++ A K+ E MKS+
Sbjct: 233 MDGLCESGRLKEAIELFEEMVSKDQILPDALTYNVLINGFSCWGKVDRAKKIMEFMKSNG 292
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C P+ YS+L+ K GR+++A + FE+MK G+ + + Y +I+ C + A+
Sbjct: 293 CSPNVFNYSALMSGFCKEGRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCRFGRIDEAM 352
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
LL++M+E CK D T LL+ C + R + +L + + ++ +Y ++ L
Sbjct: 353 ALLEEMKETKCKADIVTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSL 412
Query: 487 IESGKLELACSFFEEMISKGIVPYHST 513
+ G L+ A +S+G VP+H+T
Sbjct: 413 CQKGDLDKALELLGLTLSRGFVPHHAT 439
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 155/315 (49%), Gaps = 10/315 (3%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
++N + KS + +VKEM + + Y +L T ST+M L GR +A+E F
Sbjct: 192 IFNIFIKYHCKSGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEE 251
Query: 223 M-KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN--ILIHGWCKT 279
M K + D +VL++ V+ A K+ +EF S +FN L+ G+CK
Sbjct: 252 MVSKDQILPDALTYNVLINGFSCWGKVDRAKKI-MEFMKSNGCSPNVFNYSALMSGFCKE 310
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT---LKEMQEKGCKPSV 336
++++A A +EM G D V YT I ++CR F ++D+ L+EM+E CK +
Sbjct: 311 GRLEEAMDAFEEMKIFGLKQDTVGYTILINYFCR---FGRIDEAMALLEEMKETKCKADI 367
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+T +++ + EAL + ++ S+ + + Y ++ L + G + A E+
Sbjct: 368 VTVNVLLRGFCGEGRTEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKALELLGL 427
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
+G VP+ T N ++ C ++A+ L + E KP+ +++A L++ CR+++
Sbjct: 428 TLSRGFVPHHATSNELLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVEFVCRERK 487
Query: 457 MKVLNFLLTHMFKND 471
+ + LL + N+
Sbjct: 488 LLLAFELLDELTANE 502
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/310 (22%), Positives = 131/310 (42%), Gaps = 5/310 (1%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
S DL AF K + Y+T++D L +S + EL +EM +
Sbjct: 203 SGDLESAFAVVKEMKKSSISYPNLITYSTLMDGLCESGRLKEAIELFEEMVSKDQILPDA 262
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T + ++ G+ D A + MK G + S LM K +E A F E
Sbjct: 263 LTYNVLINGFSCWGKVDRAKKIMEFMKSNGCSPNVFNYSALMSGFCKEGRLEEAMDAFEE 322
Query: 258 FKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
K + + + ILI+ +C+ ++D+A ++EM + D+V+ + +C E
Sbjct: 323 MKIFGLKQDTVGYTILINYFCRFGRIDEAMALLEEMKETKCKADIVTVNVLLRGFCGEGR 382
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ L + +G + +Y IV+++L + +++AL++ S +P + +
Sbjct: 383 TEEALGMLNRLSSEGIYLNKASYRIVLNSLCQKGDLDKALELLGLTLSRGFVPHHATSNE 442
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ L KAG DA + + G P ++ ++ C E L L ++ ++L
Sbjct: 443 LLVGLCKAGMADDAVVALYGLAEMGFKPEQDSWALLVEFVC----RERKLLLAFELLDEL 498
Query: 437 CKPDCETYAP 446
+CE + P
Sbjct: 499 TANECEDFVP 508
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/402 (26%), Positives = 185/402 (46%), Gaps = 24/402 (5%)
Query: 145 FGFFTW--AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM-DELNNGYVS----- 196
F FFTW + + + HT Y TM+ L + L++ + G S
Sbjct: 1 FSFFTWLSSPANSTFRHTLHXYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 197 -----------LATMSTIMRRLVRGGRYDDAVEAFRGMK--KYGVEKDTRALSVLMDTLV 243
J S ++ + G DA+E +R + K+ V DT +++ L+
Sbjct: 61 IXETXGTQRSDJYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDT--CRKVLEHLM 118
Query: 244 KGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K + + + E +C P S FNIL+H +CK + AQ + + G P VV
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVV 178
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
SY + Y R D + M G +P V TY+++++ L K ++++A +++++M
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEM 238
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+P+ +++LI K GRV A EI++ M Q + P+++TYNT+I C + +
Sbjct: 239 LVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 298
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+ A L+ +M KPD TY L+ CC++ + M + ++ +D Y +L
Sbjct: 299 KQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTAL 358
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ GL + G+ A EM+S G+ P TY M+ + KK
Sbjct: 359 ISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKK 400
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 129/255 (50%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K + ++ A ++F
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K +P + F LI G CK +VD A + K+M Q SPD+++Y I C+
Sbjct: 236 DEMLVKGLVP-NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 294
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ + EM KG KP ITYT ++ K ++ A + ++M ++ D
Sbjct: 295 KGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVA 354
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P+ TY +I+ C + + KLL++M+
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQ 414
Query: 434 EDLCKPDCETYAPLL 448
D P TY L+
Sbjct: 415 RDGHVPSVVTYNVLM 429
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 153/348 (43%), Gaps = 37/348 (10%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W +E+ L GY SL + +M R + G A F + K+G+
Sbjct: 117 LMKLKYFKLVWGFYEEI--LECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLR 174
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ +N L++G+ + +D+ +
Sbjct: 175 PSVVS----------------------------------YNTLMNGYIRLGDLDEGFRLK 200
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
M G PDV +Y+ I C+E ++ EM KG P+ +T+T ++ K
Sbjct: 201 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 260
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+++ A+++Y++M S PD Y++LI+ L K G +K A+ + ++M +G+ P+ +TY
Sbjct: 261 GRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITY 320
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
T+I C + ++A + ++M ++ + D Y L+ C++ R +L M
Sbjct: 321 TTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREMLS 380
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ DA TY ++ + G + +EM G VP TY +L
Sbjct: 381 VGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVL 428
>gi|356512664|ref|XP_003525037.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g74750-like [Glycine max]
Length = 873
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 189/401 (47%), Gaps = 9/401 (2%)
Query: 65 VIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVS 124
V+P++ H + K +S+R N V+ +S IL + P +AL S
Sbjct: 286 VVPTIKESFNKHPRDLK--MSARTAPMNRRI-VEVVSDILRQLRWGP-TAEKALYNLNFS 341
Query: 125 VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV 184
+ Q L++ D + A GFF W + Q G+ H Y TMV +LG++++F + +L+
Sbjct: 342 MDAYQANQILKQL-QDPSVALGFFDWLRRQPGFRHDGHTYTTMVGILGRARRFDSISKLL 400
Query: 185 KEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
++M + + ++ T + ++ +A+ F M++ G E D L+D K
Sbjct: 401 EQMVK-DGCQPNVVTYNRLIHCYGCANYLKEALNVFNEMQEVGCEPDRVTYCTLIDIHAK 459
Query: 245 GNSVEHAYKVFLEFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
++ A ++ ++ LS F +++I+ K + A EM + G P++V
Sbjct: 460 AGFIDVAMSMYKRMQEA-GLSPDTFTYSVIINCLGKAGNLAAAHWLFCEMVEHGCVPNLV 518
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+Y I + +++ +MQ G +P +TY+IVM ALG + EA V+ +M
Sbjct: 519 TYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYLEEAESVFVEM 578
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+ + +PD Y L+ + KAG V+ A+E ++ M G++PNV T N+++S+
Sbjct: 579 QQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSLLSAFLRLHRL 638
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
+A L+Q M +P +TY LL C + + F
Sbjct: 639 PDAYNLVQSMVALGLRPSLQTYTLLLSCCTEAQPAHDMGFF 679
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 132/262 (50%), Gaps = 1/262 (0%)
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ R+ D K +++M + G P+VV+Y I Y ++ + EMQE GC+P +
Sbjct: 389 RARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNEMQEVGCEPDRV 448
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY ++ KA I+ A+ +Y++M+ PDT YS +I L KAG + A+ +F +M
Sbjct: 449 TYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNLAAAHWLFCEM 508
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+ G VPN++TYN MI+ E ALKL M+ +PD TY+ +++ +
Sbjct: 509 VEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIVMEALGHCGYL 568
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST-YKM 516
+ + M + + D Y LV ++G +E A +++ M++ G++P T +
Sbjct: 569 EEAESVFVEMQQKNWVPDEPVYGLLVDLWGKAGNVEKASEWYQAMLNAGLLPNVPTCNSL 628
Query: 517 LEEKLEKKRLGNAKERINKLLA 538
L L RL +A + ++A
Sbjct: 629 LSAFLRLHRLPDAYNLVQSMVA 650
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q GF D +YT + R + F + L++M + GC+P+V+TY ++H G A +
Sbjct: 370 QPGFRHDGHTYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLK 429
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
EAL V+ +M+ C PD Y +LI I +KAG + A +++ M++ G+ P+ TY+ +I
Sbjct: 430 EALNVFNEMQEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVII 489
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ A L +M E C P+ TY ++ + + + ++ L M
Sbjct: 490 NCLGKAGNLAAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQ 549
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
D TY+ ++ L G LE A S F EM K VP Y +L
Sbjct: 550 PDKVTYSIVMEALGHCGYLEEAESVFVEMQQKNWVPDEPVYGLL 593
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 91/184 (49%)
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYT ++ LG+A++ + K+ E+M D C P+ Y+ LI A +K+A +F +M
Sbjct: 379 TYTTMVGILGRARRFDSISKLLEQMVKDGCQPNVVTYNRLIHCYGCANYLKEALNVFNEM 438
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
++ G P+ +TY T+I + A+ + ++M+E PD TY+ ++ + +
Sbjct: 439 QEVGCEPDRVTYCTLIDIHAKAGFIDVAMSMYKRMQEAGLSPDTFTYSVIINCLGKAGNL 498
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++L M ++ + TY ++ ++ E+A + +M + G P TY ++
Sbjct: 499 AAAHWLFCEMVEHGCVPNLVTYNIMIALQAKARNYEMALKLYHDMQNAGFQPDKVTYSIV 558
Query: 518 EEKL 521
E L
Sbjct: 559 MEAL 562
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/402 (26%), Positives = 183/402 (45%), Gaps = 24/402 (5%)
Query: 145 FGFFTW--AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEM-DELNNGYVS----- 196
F FFTW + + + HT Y TM+ L + L++ + G S
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAA 60
Query: 197 -----------LATMSTIMRRLVRGGRYDDAVEAFRGMK--KYGVEKDTRALSVLMDTLV 243
L S ++ + G DA+E +R + K+ V DT +++ L+
Sbjct: 61 IFETKGTQRSDLYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDT--CRKVLEHLM 118
Query: 244 KGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
K + + + E +C P S FNIL+H +CK + AQ + + G P VV
Sbjct: 119 KLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVV 178
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
SY + Y R D + M G +P V TY+++++ L K +I++A +++++M
Sbjct: 179 SYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEM 238
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+P++ +++LI K GRV A EI++ M Q + P+++TYNT+I C + +
Sbjct: 239 LVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDL 298
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+ A L+ +M KPD TY L+ CC+ + M + + +D Y +L
Sbjct: 299 KQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTAL 358
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ GL G+ A EM+S G+ P TY M+ + KK
Sbjct: 359 ISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKK 400
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 130/255 (50%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K + ++ A ++F
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELF 235
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K +P +S F LI G CK +VD A + K+M Q SPD+++Y I C+
Sbjct: 236 DEMLVKGLVP-NSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 294
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ + EM KG KP ITYT ++ K ++ A + ++M ++ D
Sbjct: 295 KGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVV 354
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + G+ DA ++ +M G+ P+ TY +I+ C + + KLL++M+
Sbjct: 355 YTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 434 EDLCKPDCETYAPLL 448
D P TY L+
Sbjct: 415 RDGHVPSVVTYNVLM 429
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 147/317 (46%), Gaps = 4/317 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W +E+ L GY SL + +M R + G A F + K+G+
Sbjct: 117 LMKLKYFKLVWGFYEEI--LECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLR 174
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKV-FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
+ + LM+ ++ ++ +++ + +++LI+G CK K+DDA +
Sbjct: 175 PSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANEL 234
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
EM +G P+ V++T I+ +C+ + K+M + P +ITY +++ L K
Sbjct: 235 FDEMLVKGLVPNSVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 294
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
+ +A + ++M PD Y++LI K G + A E + M ++ + +
Sbjct: 295 KGDLKQAHHLIDEMSMKGLKPDKITYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVV 354
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y +IS C + +A K+L++M KPD TY ++ C+K + + LL M
Sbjct: 355 YTALISGLCREGQSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 469 KNDVSMDAGTYASLVRG 485
++ TY L+ G
Sbjct: 415 RDGHVPSVVTYNVLMNG 431
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/409 (26%), Positives = 180/409 (44%), Gaps = 47/409 (11%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELN-------NGYVSLATMSTIMRRLVRG 210
TP++ Y T++ L + + +L +EM LN N ++ T + I+ L +
Sbjct: 171 TPDVVTYGTLIKGLCGTGNINIALKLHQEM--LNDISRYEINCKPNVITYNIIVDGLCKV 228
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIF 269
GR D+A + F MK G+ + + L+ E + ++ E D + F
Sbjct: 229 GREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTF 288
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N+LI CK KV +A+K + M + G PD+V+Y IE +C D + M
Sbjct: 289 NVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPS 348
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
KGC+P VI+Y ++++ K ++ EA+K+Y +M P+ Y SL+ + AG+V D
Sbjct: 349 KGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDD 408
Query: 390 ANEIFEDMKKQGVVPNVLTY-----------------------------------NTMIS 414
A ++F MK G+ N TY N +I
Sbjct: 409 AKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLID 468
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
C + E A +L +K+ + +P+ TY ++ CR+ ++ N L+ M N +
Sbjct: 469 GLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTP 528
Query: 475 DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
D TY +L+RG ES KLE M K + P T ++ + L K
Sbjct: 529 DIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSK 577
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 168/359 (46%), Gaps = 8/359 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
SL++ + ++ L + Y + M+ G+ D L++L++ L N + + F
Sbjct: 68 SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAF 127
Query: 256 LE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ + +N LI G C ++ +A + M + G +PDVV+Y I+ C
Sbjct: 128 AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGT 187
Query: 315 KDFRKVDDTLKEM------QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+ +EM E CKP+VITY I++ L K + +EA +++E+MK+ +
Sbjct: 188 GNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMI 247
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P Y+SLI AG+ +++ + ++M QG+ P+++T+N +I + C + A KL
Sbjct: 248 PSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 307
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
L M E PD TY L++ C + L M D +Y L+ G +
Sbjct: 308 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSK 367
Query: 489 SGKLELACSFFEEMISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
+ K+E A + EM+ G P TY +L+ ++ +AK+ + + AH + ++
Sbjct: 368 TLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSY 426
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 142/300 (47%), Gaps = 6/300 (2%)
Query: 161 PEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAV 217
P+M +N ++D L K K +L+ M E +G V L T ++++ G + A
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIE--SGIVPDLVTYNSLIEGFCMVGDLNSAR 340
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGW 276
E F M G E D + +VL++ K VE A K++ E + I ++ L+ G
Sbjct: 341 ELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGI 400
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
KVDDA+K M G + + +Y F++ C+ + E++ K +
Sbjct: 401 FLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEI 460
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
++ L KA ++ A +++EK+ ++ P+ Y+ +I + G+V AN + +
Sbjct: 461 ENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQK 520
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M+ G P+++TYNT++ ++ E ++LL +M + PD T + ++ M + ++
Sbjct: 521 MEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEK 580
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/256 (25%), Positives = 111/256 (43%), Gaps = 8/256 (3%)
Query: 277 CKTRKVD--DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
CKT V A M + +P + S+ + + K + +V +M+ G
Sbjct: 43 CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
T I+++ L ++ E + + P+ Y++LI L R+ +A +F
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL------CKPDCETYAPLL 448
M+K G P+V+TY T+I C ALKL Q+M D+ CKP+ TY ++
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+ R L M + +Y SL+ G +GK E + +EM+ +G+
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282
Query: 509 PYHSTYKMLEEKLEKK 524
P T+ +L + L K+
Sbjct: 283 PDMVTFNVLIDTLCKE 298
>gi|297836334|ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331889|gb|EFH62308.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 755
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 190/462 (41%), Gaps = 63/462 (13%)
Query: 114 VVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGK 173
V E L+ G+ ++ VE L R + F GY
Sbjct: 310 VEEILRAHGLELAREFVEHMLSRGRHLNAALLSLFIRKYCSDGYFDKG------------ 357
Query: 174 SKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTR 233
WEL+ M + + + + +L + G +A +K +G+ +D+
Sbjct: 358 -------WELLMGMKDYGI-RPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQDSV 409
Query: 234 ALSVLMDTLVKGNSVEHAYKVFLEFK---DCIPLSSQIFNILIHGWCKTRKVDDAQKAMK 290
++S ++D K E A K+ F+ + SS + NI C T + A +
Sbjct: 410 SVSSVIDGFCKVGKPEEAIKLIHSFRLRPNIFVYSSFLSNI-----CSTGDMLRASTIFQ 464
Query: 291 EMFQQGFSPDVVSYTCFIEHYCR----EKDFRKVDDTLKE-------------------- 326
E+F+ G PD YT I+ YC +K F+ LK
Sbjct: 465 EIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFG 524
Query: 327 -----------MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
M+ +G P V+TY +M+ GK Q+N+ ++ ++M+S PD + Y+
Sbjct: 525 SISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYN 584
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
LI + G V +ANEI ++ ++G VP+ L + +I R + + A L M +
Sbjct: 585 ILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADL 644
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
KPD T + LL CR +RM+ L + + D Y +L+ G G +E A
Sbjct: 645 RVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKA 704
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
C M+ +G++P ST+ L LE KR N++E + LL
Sbjct: 705 CELIGLMVQRGMLPNESTHHALVVGLEGKRFMNSEEHASMLL 746
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 91/440 (20%), Positives = 188/440 (42%), Gaps = 37/440 (8%)
Query: 123 VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL----------- 171
+ + + L E+TL D + A FF W++ G H+ + M+ +L
Sbjct: 180 IRILDDLFEETL-----DASIALYFFRWSELWIGVAHSSRSISRMIHILVSGNMNYRAVD 234
Query: 172 ----------GKSKKFCLMWELVKEMDELNNGYVSLATM-STIMRRLVRGGRYDDAVEAF 220
GK + CL ++K++ E L T+ ++ ++ + D A++
Sbjct: 235 MLLCLVKKCSGKERSLCL---VIKDLFETRIDRRVLETVFCMLIDCCIKERKVDMALKLT 291
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILIHGWCK 278
+ ++G+ L++ +++ + +E A + F+E L++ + ++ I +C
Sbjct: 292 YKIDQFGIFPSRGVCISLVEEILRAHGLELA-REFVEHMLSRGRHLNAALLSLFIRKYCS 350
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
D + + M G PD+V++T FI+ C+ R+ L +++ G ++
Sbjct: 351 DGYFDKGWELLMGMKDYGIRPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQDSVS 410
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+ V+ K + EA+K+ + P+ YSS + + G + A+ IF+++
Sbjct: 411 VSSVIDGFCKVGKPEEAIKLIHSFRLR---PNIFVYSSFLSNICSTGDMLRASTIFQEIF 467
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ G++P+ Y TMI C + A + + + P TY L+ C + +
Sbjct: 468 ELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSIS 527
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML- 517
+ M + D TY +L+ G ++ +L +EM S GI P +TY +L
Sbjct: 528 DAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILI 587
Query: 518 EEKLEKKRLGNAKERINKLL 537
+ + + A E I++L+
Sbjct: 588 HSMVVRGYVDEANEIISELI 607
>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
Length = 479
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 112/442 (25%), Positives = 199/442 (45%), Gaps = 55/442 (12%)
Query: 145 FGFFTWAK-TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
F T+ K T+ G+ T +NT++ L + +L +M + N + T +T+
Sbjct: 33 FALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCKPN-----VVTFTTL 87
Query: 204 MRRLVRGGRYDDAVEAFR-------------------GMKKYG----------------- 227
M L R GR +AV GM K G
Sbjct: 88 MNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSH 147
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQ 286
++ D S ++D L K A +F+E +D I ++ +I+G+C + K +AQ
Sbjct: 148 IKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQ 207
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHAL 346
+ ++EM + SPDVV+++ I +E D D L+EM G P+V+T ++ L
Sbjct: 208 RLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGL 267
Query: 347 GKAKQINEALKVYEKMKS-----------DDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ ++ +AL++++ M+ + PD Y+ LI L G+ +A E++E
Sbjct: 268 CDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYE 327
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M +G+VP+ +TY++MI+ C +S + A ++ M P+ T+ L+ C+
Sbjct: 328 EMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAG 387
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ L M + + +A TY +L+RG + G + + F+EMIS G+ P T +
Sbjct: 388 MVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIR 447
Query: 516 -MLEEKLEKKRLGNAKERINKL 536
ML K+ L A + +L
Sbjct: 448 NMLTGLWSKEELKRALAMLEEL 469
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/323 (25%), Positives = 140/323 (43%), Gaps = 59/323 (18%)
Query: 246 NSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
N+++H + IP FNILI +C K+ A ++ + GF P +V++
Sbjct: 3 NNIKHGLQ--------IPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFN 54
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
+ C E + D +M CKP+V+T+T +M+ L + ++ EA+ + ++M D
Sbjct: 55 TLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVED 110
Query: 366 DCL------------------------------------PDTSFYSSLIFILSKAGRVKD 389
PD YS++I L K GR D
Sbjct: 111 GLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTD 170
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A +F +M+ +G+ P+++TY+ MI+ C+ + A +LLQ+M PD T++ L+
Sbjct: 171 AQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLIN 230
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM------- 502
++ + LL M + V + T +L+ GL +SGKL+ A F+ M
Sbjct: 231 ALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDI 290
Query: 503 ----ISKGIVPYHSTYKMLEEKL 521
G+ P TY +L L
Sbjct: 291 DATHAFNGVEPDVQTYNILISGL 313
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 120/243 (49%), Gaps = 6/243 (2%)
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D+ S+ I+ +C T ++ + G P+++T+ ++H L +++EAL ++
Sbjct: 14 DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+M C P+ +++L+ L + GRV +A + + M + G+ PN +TY T++ C
Sbjct: 74 HQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129
Query: 420 SEEENALKLLQKMEE-DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ +AL LL+KMEE KPD Y+ ++ + R L M + D T
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVT 189
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR-LGNAKERINKLL 537
Y+ ++ G SGK A +EM+ + I P T+ L L K+ L +A++ + +++
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249
Query: 538 AHA 540
+
Sbjct: 250 SSG 252
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 131/282 (46%), Gaps = 13/282 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ M++ S K+ L++EM + + T S ++ LV+ G + A + + M
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEM-LVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------------DCIPLSSQIFNI 271
GV + + L+D L ++ A ++F + + + Q +NI
Sbjct: 249 ISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNI 308
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G K +A++ +EM +G PD V+Y+ I C++ + M K
Sbjct: 309 LISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKS 368
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P+++T+ ++ KA +++ L+++ +M + + Y +LI K G + +
Sbjct: 369 FSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSL 428
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+IF++M GV P+ +T M++ ++ E + AL +L++++
Sbjct: 429 DIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQ 470
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 174/347 (50%), Gaps = 6/347 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y T+V + ++F +L+ EM EL G+ + A +S ++ L + G+ DDA E
Sbjct: 298 YCTLVLGFCRLQQFEAGIQLMDEMVEL--GFSPTEAAVSGLVDGLRKQGKIDDAYELVVK 355
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
+ ++G + + L+++L KG ++ A ++ + + P + ++ILI +C++
Sbjct: 356 VGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRP-NGITYSILIDSFCRSG 414
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++D A M Q G V +Y I C+ D + EM KG +P+ T+T
Sbjct: 415 RLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFT 474
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K Q+ +A K+Y KM + P+ +++LI L ++ +A+E+F+++ ++
Sbjct: 475 SLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVER 534
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ P +TYN +I C + + A +LL+ M + PD TY PL+ C R+
Sbjct: 535 KIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKA 594
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + K +V ++ Y++L+ G + G+L A S EMI +GI
Sbjct: 595 KDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGI 641
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/446 (24%), Positives = 199/446 (44%), Gaps = 14/446 (3%)
Query: 102 KILSKQYQSPDKVVEALKGCGVSVSNSLVEQ--TLRRFSNDLTPAFGFFT-WA----KTQ 154
+L + Y ++ +A+ + +N+L+ + TL N L F T W
Sbjct: 159 NLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVN 218
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRY 213
G P + +V + + K F E ++ M+ NG+ +S+ T + ++ L +G R
Sbjct: 219 AGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEA--NGFDLSIVTYNVLIHGLCKGDRV 276
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC--IPLSSQIFNI 271
+AVE R + G+ D L+ + E ++ E + P + +
Sbjct: 277 SEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSG- 335
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+ G K K+DDA + + ++ + GF P++ Y I C+ D K + M
Sbjct: 336 LVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMN 395
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+P+ ITY+I++ + ++ +++ A+ +++M D Y+SLI K G + A
Sbjct: 396 LRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAE 455
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+F +M +GV P T+ ++IS C + + A KL KM ++ P+ T+ L+
Sbjct: 456 SLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGL 515
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C +M + L + + + TY L+ G GK++ A E+M KG+VP
Sbjct: 516 CSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDT 575
Query: 512 STYKMLEEKL-EKKRLGNAKERINKL 536
TY+ L L R+ AK+ I+ L
Sbjct: 576 YTYRPLISGLCSTGRVSKAKDFIDDL 601
Score = 130 bits (326), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 160/349 (45%), Gaps = 39/349 (11%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T + ++ R G+ D A E M + G+ DT L+ L V A K F++
Sbjct: 541 VTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKA-KDFID 599
Query: 258 --FKDCIPLSSQIFNILIHGWCKTRKVDDAQKA--------------------------- 288
K + L+ ++ L+HG+C+ ++ +A A
Sbjct: 600 DLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQP 659
Query: 289 --------MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+K+M QG PD V YT I+ Y +E F+K + M + C P+V+TYT
Sbjct: 660 DRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYT 719
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+M+ L KA +++ A ++++M++ + P++ Y + L+K G +K+A + M K
Sbjct: 720 ALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK- 778
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G++ N +T+N +I C A K+L +M E+ PDC TY+ L+ CR +
Sbjct: 779 GLLANTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGAS 838
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
L M + D Y L+ G +G+L+ A ++M+ +GI+P
Sbjct: 839 VKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIP 887
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 184/429 (42%), Gaps = 57/429 (13%)
Query: 156 GYMHTPEMYNTMVDVL---GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
G++ +YN +++ L G K L++ + M+ NG T S ++ R GR
Sbjct: 360 GFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNG----ITYSILIDSFCRSGR 415
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNI 271
D A+ F M + G+ + A + L++ K + A +F+E + + ++ F
Sbjct: 416 LDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTS 475
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G+CK +V A K +M G +P+V ++T I C + + E+ E+
Sbjct: 476 LISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK 535
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
KP+ +TY +++ + +I++A ++ E M +PDT Y LI L GRV A
Sbjct: 536 IKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAK 595
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK------------------------ 427
+ +D+ KQ V N + Y+ ++ C AL
Sbjct: 596 DFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGA 655
Query: 428 -----------LLQKMEEDLCKPDCETYAPLLKMCCR----KKRMKVLNFLLT-HMFKND 471
LL+ M + +PD Y ++ + KK + + ++T F N
Sbjct: 656 LKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNV 715
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
V TY +L+ GL ++G+++ A F+ M + + P TY + L K+ GN KE
Sbjct: 716 V-----TYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKE--GNMKE 768
Query: 532 RINKLLAHA 540
I L HA
Sbjct: 769 AIG--LHHA 775
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 170/374 (45%), Gaps = 4/374 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGG 211
+ G+ T + +VD L K K +ELV ++ G+V +L + ++ L +GG
Sbjct: 322 VELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRF--GFVPNLFVYNALINSLCKGG 379
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFN 270
D A + M + + S+L+D+ + ++ A F +D I + +N
Sbjct: 380 DLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYN 439
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI+G CK + A+ EM +G P ++T I YC++ +K +M +
Sbjct: 440 SLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDN 499
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G P+V T+T ++ L ++ EA ++++++ P Y+ LI + G++ A
Sbjct: 500 GITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKA 559
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E+ EDM ++G+VP+ TY +IS C+ A + + + K + Y+ LL
Sbjct: 560 FELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHG 619
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C++ R+ M + ++MD +A L+ G ++ + ++M +G+ P
Sbjct: 620 YCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPD 679
Query: 511 HSTYKMLEEKLEKK 524
+ Y + + K+
Sbjct: 680 NVIYTSMIDTYSKE 693
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 110/471 (23%), Positives = 192/471 (40%), Gaps = 57/471 (12%)
Query: 124 SVSNSL----VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKF-- 177
S+S++L VEQ L +D A FF + H+ Y MV L S+ F
Sbjct: 62 SISSTLRPHHVEQVLMNTLDDAKLALRFFNFLGLHKNMNHSTTSYAIMVHALVHSRLFWP 121
Query: 178 ---CLMWELVKE----------MDELNN-GYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
L L++E +D + S + +++ V R DAV + M
Sbjct: 122 ANSLLHTLLLRESHPKCVFSHFLDSYKRCKFSSTLGFNLLVQNYVLSSRIFDAVVIVKLM 181
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF----------------------LEFKDC 261
+ + R LS L++ L+K +++F E KD
Sbjct: 182 FANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDF 241
Query: 262 I--------------PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
+ LS +N+LIHG CK +V +A + + + +G + DVV+Y
Sbjct: 242 LRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTL 301
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
+ +CR + F + EM E G P+ + ++ L K +I++A ++ K+
Sbjct: 302 VLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGF 361
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
+P+ Y++LI L K G + A ++ +M + PN +TY+ +I S C + A+
Sbjct: 362 VPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAIS 421
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+M +D Y L+ C+ + L M V A T+ SL+ G
Sbjct: 422 YFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYC 481
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLL 537
+ +++ A + +MI GI P T+ L L ++ A E ++L+
Sbjct: 482 KDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELV 532
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 98/224 (43%), Gaps = 37/224 (16%)
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHG 275
+ + M G+ D + ++DT K S + A++ + + ++C P + + L++G
Sbjct: 666 DLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFP-NVVTYTALMNG 724
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH------------------------- 310
CK ++D A K M P+ ++Y CF+++
Sbjct: 725 LCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLKGLLANT 784
Query: 311 ---------YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
+C+ F + L EM E G P +TY+ +++ ++ + ++K+++
Sbjct: 785 VTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDT 844
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
M + PD Y+ LI+ G + A E+ +DM ++G++P+
Sbjct: 845 MLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRRGIIPD 888
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 184/402 (45%), Gaps = 24/402 (5%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVL--------------------GKSKKFCLMWELVKE 186
FF ++ + HT Y TM+ L G + L +++
Sbjct: 105 FFNHLASRPPFRHTLHSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSILRT 164
Query: 187 MDELNNGYVSLA-TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
M ++ + S+ ++ V G DAV+ FR + K R L+ +V+
Sbjct: 165 MPRHHHHHHSVGLVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCENLLRRVVRL 224
Query: 246 NSVE--HAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
VE ++ ++LE D P FN+L+HG+CK V +A+ E+ ++G P VV
Sbjct: 225 RPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVV 284
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
S+ I C+ D + M+ +G P V T++ +++ L K +++E ++++M
Sbjct: 285 SFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEM 344
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+P+ +++LI K G+V A + F+ M QGV P+++TYN +I+ C +
Sbjct: 345 CGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDL 404
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+ A +L+ +M KPD T+ L+ CC+ M+ + M + + +D + +L
Sbjct: 405 KEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDVAFTAL 464
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+ GL G++ A +M+S G P TY M+ + KK
Sbjct: 465 ISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKK 506
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 149/305 (48%), Gaps = 2/305 (0%)
Query: 235 LSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
+VLM K V +A VF E K + + FN LI G CK+ V++ + M
Sbjct: 251 FNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVME 310
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
+G PDV +++ I C+E + EM +G P+ +T+T ++ K +++
Sbjct: 311 SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVD 370
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
ALK ++ M + PD Y++LI L K G +K+A + +M G+ P+ +T+ T+I
Sbjct: 371 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLI 430
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C + E+AL++ ++M E+ + D + L+ CR+ R+ +LT M
Sbjct: 431 DGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFK 490
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKER 532
D TY ++ + G +++ +EM S G VP TY L L K+ ++ NAK
Sbjct: 491 PDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKML 550
Query: 533 INKLL 537
++ +L
Sbjct: 551 LDAML 555
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 151/327 (46%), Gaps = 12/327 (3%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFR---GMKKYGVEKDTRALSVLMDTLVKGNSVEHAY 252
++ + +T++ + G D E FR M+ GV D S L++ L K ++
Sbjct: 282 TVVSFNTLISGCCKSG---DVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGS 338
Query: 253 KVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
+F E + +P + F LI G CK KVD A K + M QG PD+V+Y I
Sbjct: 339 LLFDEMCGRGLVP-NGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALING 397
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
C+ D ++ + EM G KP IT+T ++ K + AL++ +M + D
Sbjct: 398 LCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELD 457
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
+++LI L + GRV DA + DM G P+ TY +I C + + + KLL+
Sbjct: 458 DVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMGFKLLK 517
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
+M+ D P TY L+ C++ +MK LL M V+ + TY L+ G + G
Sbjct: 518 EMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDGHSKHG 577
Query: 491 KLELACSFFEEMISKGIVPYHSTYKML 517
F E KG+V +++Y L
Sbjct: 578 SSVDVDIFNSE---KGLVTDYASYTAL 601
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 159/329 (48%), Gaps = 1/329 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ S ++ + G DA+E FR KK+ +++ L+K + + +
Sbjct: 66 IYVFSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYFKLVWGFYK 125
Query: 257 EFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E +C P S FNIL+H +CK ++ AQ + + G P VVS+ + Y +
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
D + M+ G +P V TY+++++ L K +++EA ++ +M + +P+ ++
Sbjct: 186 DLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFT 245
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI K GR+ A +I+ M QG P+V+TYNT+I C + + + A LL +M
Sbjct: 246 TLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRK 305
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
KPD TY L+ C++ ++ L M K + +D Y +L+ GL + G+ A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDA 365
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
EM+ G+ P TY M+ + KK
Sbjct: 366 EKMLREMLRVGLKPDDETYTMIMNEFCKK 394
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 149/340 (43%), Gaps = 37/340 (10%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W KE+ L GY SL + +M R + G A F + K+G+
Sbjct: 111 LMKXKYFKLVWGFYKEI--LECGYPASLYFFNILMHRFCKEGEMRLAQSVFDAITKWGLR 168
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ FN L++G+ K +D+ +
Sbjct: 169 PSVVS----------------------------------FNTLMNGYIKLGDLDEGFRLK 194
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
M G PDV +Y+ I C+E + + EM + G P+ +T+T ++ K
Sbjct: 195 NAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKN 254
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+++ A+ +Y +M + PD Y++LI+ L K G +K A + ++M ++G+ P+ +TY
Sbjct: 255 GRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITY 314
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
T+I +C + E A +L ++M ++ + D Y L+ C++ R +L M +
Sbjct: 315 TTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREMLR 374
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ D TY ++ + G ++ A EM G VP
Sbjct: 375 VGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVP 414
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 115/253 (45%), Gaps = 44/253 (17%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M ++ G D+ M+ GV+ D SVL++ L K + ++ A +F
Sbjct: 170 SVVSFNTLMNGYIKLGDLDEGFRLKNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLF 229
Query: 256 LEFKD--CIP-------------------LSSQIF---------------NILIHGWCKT 279
E D +P L+ I+ N LI+G CK
Sbjct: 230 GEMLDNGLVPNGVTFTTLIDGHCKNGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKK 289
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV--- 336
+ A+ + EM ++G PD ++YT I+ C+E D +T E++E+ K S+
Sbjct: 290 GDLKQARYLLDEMSRKGLKPDKITYTTLIDGSCKEGDL----ETAFELRERMIKESIRLD 345
Query: 337 -ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ YT ++ L + + +A K+ +M PD Y+ ++ K G VK A+E+
Sbjct: 346 DVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASELLR 405
Query: 396 DMKKQGVVPNVLT 408
+M++ G VP V+T
Sbjct: 406 EMQRNGRVPCVVT 418
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/488 (23%), Positives = 212/488 (43%), Gaps = 53/488 (10%)
Query: 93 HETDVDKISKILS-----KQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGF 147
H + + +KIL KQY + + + ++ G+ + + + F + AF F
Sbjct: 6 HTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSF 65
Query: 148 FTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD----ELNNGY-VSLATMS 201
K + GY NT++ K CL E+ K + + G+ + +
Sbjct: 66 SVLGKILKLGYQPDTITLNTLM------KGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYG 119
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE---- 257
T++ L + G AV+ R ++ + + ++D L K V AY ++ E
Sbjct: 120 TLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR 179
Query: 258 --FKDCIPLSS------------------------------QIFNILIHGWCKTRKVDDA 285
F D I ++ I+NILI+ CK V +A
Sbjct: 180 GIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEA 239
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ + M ++G P VV+Y+ ++ YC + + M + G P+V +Y I+++
Sbjct: 240 KNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMING 299
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
L K K+++EA+ + +M + +PDT Y+SLI L K+GR+ A + +M +G +
Sbjct: 300 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPAD 359
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
V+TY +++ + C + A L KM+E +P TY L+ C+ R+K L
Sbjct: 360 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 419
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
H+ +D TY ++ GL + G + A + +M G +P T++++ L +K
Sbjct: 420 HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKD 479
Query: 526 LGNAKERI 533
+ E++
Sbjct: 480 ENDKAEKL 487
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 157/347 (45%), Gaps = 2/347 (0%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
MYNT++D L K K ++L EMD + T +T++ G+ A
Sbjct: 152 MYNTIIDGLCKDKLVNEAYDLYSEMDA-RGIFPDAITYTTLIYGFCLLGQLMGAFSLLDE 210
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRK 281
M + ++L++ L K +V+ A + + K+ I ++ L+ G+C +
Sbjct: 211 MILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGE 270
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V +A++ M Q G +P+V SY I C+ K + + L+EM K P +TY
Sbjct: 271 VQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNS 330
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K+ +I AL + +M D Y+SL+ L K + A +F MK++G
Sbjct: 331 LIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERG 390
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P + TY +I C +NA +L Q + C D TY ++ C++
Sbjct: 391 IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEAL 450
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
+ + M N +A T+ ++R L E + + A EMI+KG++
Sbjct: 451 AIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 497
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 122/270 (45%), Gaps = 34/270 (12%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
+ T ST+M G +A + F M + GV + + +++++ L K V+ A +
Sbjct: 254 GVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLL 313
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K+ +P + +N LI G CK+ ++ A M EM +G DVV+YT ++ C+
Sbjct: 314 REMLHKNMVP-DTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK 372
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
++ K +M+E+G +P++ TYT ++ L K ++ A ++++ + C D
Sbjct: 373 NQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWT 432
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS------------------ 415
Y+ +I L K G +A I M+ G +PN +T+ +I S
Sbjct: 433 YTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMI 492
Query: 416 -------------ACARSEEENALKLLQKM 432
++E + A KLL +M
Sbjct: 493 AKGLLVLDFKVADVFVQNENDKAEKLLHEM 522
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 112/245 (45%), Gaps = 2/245 (0%)
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+P ++ + + + K + K+M+ KG + + +T I+++ Q+ +
Sbjct: 7 TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
V K+ PDT ++L+ L G VK + + + QG + ++Y T+++ C
Sbjct: 67 VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E A+KLL+ +E+ +P+ Y ++ C+ K + L + M + DA
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
TY +L+ G G+L A S +EMI K I P Y +L L K+ GN KE N L
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKE--GNVKEAKNLLA 244
Query: 538 AHAKE 542
KE
Sbjct: 245 VMTKE 249
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 102/213 (47%), Gaps = 2/213 (0%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A Q G YN M++ L K K+ L++EM N T ++++ L +
Sbjct: 280 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH-KNMVPDTVTYNSLIDGLCKS 338
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIF 269
GR A+ M G D + L+D L K +++ A +F++ K+ I + +
Sbjct: 339 GRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTY 398
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
LI G CK ++ +AQ+ + + +G DV +YT I C+E F + +M++
Sbjct: 399 TALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMED 458
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
GC P+ +T+ I++ +L + + ++A K+ +M
Sbjct: 459 NGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEM 491
>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 766
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 180/375 (48%), Gaps = 14/375 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ LG++ M LV +MDE+ + T+ ++ L + R D+A++ F M
Sbjct: 297 FNALLSCLGRNMNIGRMNALVLKMDEMKI-RPDVVTLGILINTLCKSRRVDEALQVFEQM 355
Query: 224 ------KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK---DCIPLSSQIFNILIH 274
++ D+ + L+D L K ++ A ++ + K C+P ++ +N LI
Sbjct: 356 CGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKMEERCVP-NTVTYNCLID 414
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C+ K++ A++ + M + G PDVV+ + CR +M+++G K
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDMEKEGVKG 474
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V+TY ++HA I +A+ ++KM C PD Y +LI L + R DA +
Sbjct: 475 NVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
E +++ G ++L YN +I C ++ E ++L ME++ KPD TY L+ +
Sbjct: 535 EKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKH 594
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM-ISKGIVPYHST 513
K + + ++ M ++++ TY +++ G+L A F++M + + P
Sbjct: 595 KDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVI 654
Query: 514 YKMLEEKLEKKRLGN 528
Y +L K LGN
Sbjct: 655 YNILINAFSK--LGN 667
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/320 (26%), Positives = 162/320 (50%), Gaps = 10/320 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++D ++ K E+V M E + + T++TI+ + R + AV F M
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKE-DGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDM 467
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRK 281
+K GV+ + L+ +++E A F + + C P ++I+ LI G C+ R+
Sbjct: 468 EKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSP-DAKIYYALISGLCQVRR 526
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
DA + ++++ + GFS D+++Y I +C + + KV + L +M+++G KP ITY
Sbjct: 527 DHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNT 586
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK-KQ 400
++ GK K ++ E+M+ D+ P + Y ++I G + +A ++F+DM +
Sbjct: 587 LISFFGKHKDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRS 646
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
V PN + YN +I++ AL L ++M+ + +P+ ETY L K K + + L
Sbjct: 647 KVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLKEKNQAETL 706
Query: 461 NFLLTHMFK-----NDVSMD 475
L+ M + N ++M+
Sbjct: 707 LKLMDEMVEQSCEPNQITME 726
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 176/389 (45%), Gaps = 53/389 (13%)
Query: 176 KFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRAL 235
K ++E+ KE N +++ ++R R G + +V + + K+++
Sbjct: 135 KLLRLYEIAKE----KNIPLTVVATKLLIRWFGRMGMANQSVLVYERLDSN--MKNSQVR 188
Query: 236 SVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQ--KAMK 290
+V++D L++ V+ A+KV L+ + P + +I++H K R + + + +
Sbjct: 189 NVVIDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIGLIS 248
Query: 291 EMFQQGFSPDVVSYTCFIEHYC-----------------------------------REK 315
G SP+ V T FI C R
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARTNAAWDILSDLMKNKAPLEAPPFNALLSCLGRNM 308
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM---KSDD---CLP 369
+ +++ + +M E +P V+T I+++ L K+++++EAL+V+E+M ++DD
Sbjct: 309 NIGRMNALVLKMDEMKIRPDVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKA 368
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMK-KQGVVPNVLTYNTMISSACARSEEENALKL 428
D+ +++LI L K GR+K+A E+ MK ++ VPN +TYN +I C + E A ++
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKMEERCVPNTVTYNCLIDGYCRAGKLETAKEV 428
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+ +M+ED KPD T ++ CR + + M K V + TY +L+
Sbjct: 429 VSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKML 517
+E A +F++M+ G P Y L
Sbjct: 489 LSNIEKAMHWFDKMLEAGCSPDAKIYYAL 517
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 99/221 (44%), Gaps = 2/221 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFN 270
R DA+ +++ G D A ++L+ N+ E Y++ + K+ + S +N
Sbjct: 526 RDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYN 585
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI + K + + ++ M++M + P V +Y IE YC + + K+M +
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLR 645
Query: 331 G-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
P+ + Y I+++A K +AL + E+MK P+ Y++L L + + +
Sbjct: 646 SKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLKEKNQAET 705
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
++ ++M +Q PN +T ++ E K +Q
Sbjct: 706 LLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Glycine max]
Length = 852
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/406 (27%), Positives = 177/406 (43%), Gaps = 34/406 (8%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWEL-----V 184
V + L + D A FF A + G+ H E Y + +L FC M+ L +
Sbjct: 97 VSKALVKLKGDPKSALKFFKEAGARAGFRHAAESYCVLAHIL-----FCGMFYLDARSVI 151
Query: 185 KEMDELNNGYVS-----------------LATMSTIMRRLVRGGRYDDAVEAFRGMKKYG 227
KE L + T+ LV G ++A + F M K+
Sbjct: 152 KEWILLGREFPGCDFFDMLWSTRNVCRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFR 211
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI--PLSSQIF--NILIHGWCKTRKVD 283
V R+ + L+ L K + A F KD + LS +F N++I + ++
Sbjct: 212 VLPKVRSCNELLHRLSKSSKGGLALSFF---KDMVVAGLSPSVFTYNMVIGCLAREGDLE 268
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A+ +EM +G PD+V+Y I+ Y + +EM++ GC+P VITY ++
Sbjct: 269 AARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLI 328
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ K ++I +A + MK P+ YS+LI KAG + +AN+ F DM + G+
Sbjct: 329 NCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQ 388
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
PN TY ++I + C + A KL +M++ + TY LL C RM+ L
Sbjct: 389 PNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEEL 448
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ K +++ Y SL G I++ +E A EEM K + P
Sbjct: 449 FGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKP 494
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/384 (24%), Positives = 175/384 (45%), Gaps = 9/384 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN+++D GK + +EM + + T ++++ + R A E GM
Sbjct: 289 YNSLIDGYGKVGMLTGAVSVFEEMKD-AGCEPDVITYNSLINCFCKFERIPQAFEYLHGM 347
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ----IFNILIHGWCKT 279
K+ G++ + S L+D K + A K F+ D I + Q + LI CK
Sbjct: 348 KQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFV---DMIRVGLQPNEFTYTSLIDANCKI 404
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+++A K EM Q G + ++V+YT ++ C + R+ ++ + + G + Y
Sbjct: 405 GDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIY 464
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T + H KAK + +A+ + E+M + PD Y + I+ L + ++D+ + +M
Sbjct: 465 TSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMD 524
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G+ N Y T+I + + A+ LLQ+M++ K TY L+ C+ ++
Sbjct: 525 CGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQ 584
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY-KMLE 518
HM +N + + Y +L+ GL ++ LE A + F EM+ KGI P Y +++
Sbjct: 585 AVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLID 644
Query: 519 EKLEKKRLGNAKERINKLLAHAKE 542
++ G A N+++ E
Sbjct: 645 GNMKHGNPGEALSLRNRMVEIGME 668
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/364 (26%), Positives = 168/364 (46%), Gaps = 4/364 (1%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
N ++ L KS K L K+M + S+ T + ++ L R G + A F MK
Sbjct: 220 NELLHRLSKSSKGGLALSFFKDM-VVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMK 278
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKV 282
G+ D + L+D K + A VF E KD C P +N LI+ +CK ++
Sbjct: 279 AKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEP-DVITYNSLINCFCKFERI 337
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
A + + M Q+G P+VV+Y+ I+ +C+ + + +M G +P+ TYT +
Sbjct: 338 PQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSL 397
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ A K +NEA K+ +M+ + Y++L+ L + GR+++A E+F + K G
Sbjct: 398 IDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGW 457
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
N Y ++ E A+ +L++M + KPD Y + CR+ ++
Sbjct: 458 TLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMA 517
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
++ M ++ ++ Y +L+ + GK A + +EM GI TY +L + L
Sbjct: 518 VIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLC 577
Query: 523 KKRL 526
K L
Sbjct: 578 KIGL 581
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 138/302 (45%), Gaps = 4/302 (1%)
Query: 212 RYDDAVEAFR---GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQ 267
+ D EAF+ M++ GV + + L+D L + + A ++F K L+ Q
Sbjct: 403 KIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQ 462
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
I+ L HG+ K + ++ A ++EM ++ PD++ Y I CR+ + ++EM
Sbjct: 463 IYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREM 522
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+ G + YT ++ A K + EA+ + ++M+ Y LI L K G V
Sbjct: 523 MDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLV 582
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+ A F+ M + G+ PN++ Y +I C E A L +M + PD Y L
Sbjct: 583 QQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSL 642
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + L M + + +D Y SL+ G G+++LA S +EM+ KGI
Sbjct: 643 IDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGI 702
Query: 508 VP 509
+P
Sbjct: 703 IP 704
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/346 (22%), Positives = 159/346 (45%), Gaps = 2/346 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y +++D K ++L EM + +++ T + ++ L GR +A E F +
Sbjct: 394 YTSLIDANCKIGDLNEAFKLESEMQQAGVN-LNIVTYTALLDGLCEDGRMREAEELFGAL 452
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
K G + + + L +K +E A + E K + ++ I G C+ ++
Sbjct: 453 LKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEI 512
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+D+ ++EM G + + YT I+ Y + + + L+EMQ+ G K +V+TY ++
Sbjct: 513 EDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVL 572
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L K + +A++ ++ M + P+ Y++LI L K +++A +F +M +G+
Sbjct: 573 IDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGI 632
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P+ L Y ++I AL L +M E + D Y L+ R ++++
Sbjct: 633 SPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAKS 692
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
LL M + + D L+R E G + A + ++M +G++
Sbjct: 693 LLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLI 738
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 94/184 (51%)
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P V + ++H L K+ + AL ++ M P Y+ +I L++ G ++ A +
Sbjct: 214 PKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSL 273
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
FE+MK +G+ P+++TYN++I A+ + ++M++ C+PD TY L+ C+
Sbjct: 274 FEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCK 333
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+R+ L M + + + TY++L+ ++G L A FF +MI G+ P T
Sbjct: 334 FERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFT 393
Query: 514 YKML 517
Y L
Sbjct: 394 YTSL 397
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 125/312 (40%), Gaps = 45/312 (14%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A + G+ ++Y ++ K+K ++++EM++ N L T + L R
Sbjct: 451 ALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNK-KNLKPDLLLYGTKIWGLCRQ 509
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIF 269
+D++ R M G+ ++ + L+D K A + E +D I ++ +
Sbjct: 510 NEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDLGIKITVVTY 569
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
+LI G CK V A + M + G P+++ YT I+ C+ + + EM +
Sbjct: 570 GVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLD 629
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK- 388
KG P + YT ++ K EAL + +M D Y+SLI+ S+ G+V+
Sbjct: 630 KGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQL 689
Query: 389 -------------------------------DANE---IFEDMKKQGV--------VPNV 406
D NE + +DM ++G+ VP+
Sbjct: 690 AKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSC 749
Query: 407 LTYNTMISSACA 418
LT T + CA
Sbjct: 750 LTAVTKLHKLCA 761
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 70/186 (37%), Gaps = 35/186 (18%)
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C+P + + + L + EA + + KM LP + L+ LSK+ + A
Sbjct: 177 CRPGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLAL 236
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
F+DM G+ P+V TYN +I + E A L ++M+ +PD TY
Sbjct: 237 SFFKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYN------ 290
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
SL+ G + G L A S FEEM G P
Sbjct: 291 -----------------------------SLIDGYGKVGMLTGAVSVFEEMKDAGCEPDV 321
Query: 512 STYKML 517
TY L
Sbjct: 322 ITYNSL 327
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 167/339 (49%), Gaps = 1/339 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T+ +++ +G R+ +AV M +G + + +++ L K + +A +VF
Sbjct: 673 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 732
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
K I + +N LI G + + DA + +++M ++ P+V+ +T I+ + +E
Sbjct: 733 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 792
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + + KEM + P+V TY +++ + +A +++ M S C PD Y
Sbjct: 793 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 852
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI K+ RV+D ++F +M QG+V + TYNT+I C + A K+ +M +
Sbjct: 853 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 912
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD TY LL C +++ ++ + K+++ +D TY +++GL + KL+
Sbjct: 913 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 972
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
A F + KG+ P Y + L +K L +++
Sbjct: 973 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 1011
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 5/320 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK-VF 255
L + + ++ R R A+ M K G E L+ N + A+ V
Sbjct: 106 LYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVI 165
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
L K + ++N LI G CK +++ A + + EM ++G DVV+Y + C
Sbjct: 166 LMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSG 225
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ L++M ++ P V+T+T ++ K ++EA ++Y++M P+ Y+
Sbjct: 226 RWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
S+I L GR+ DA + F+ M +G PNV+TYNT+IS C + +KL Q+M +
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
D TY L+ C+ +++V + M V+ D T+ L+ GL +G++E A
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405
Query: 496 CSFFEEMISK----GIVPYH 511
F++M GIV Y+
Sbjct: 406 LVKFDDMRESEKYIGIVAYN 425
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 169/371 (45%), Gaps = 16/371 (4%)
Query: 152 KTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGG 211
K +TG++H+ + F L +E+V + S+ + ++
Sbjct: 41 KLRTGFLHSIRFEDA----------FALFFEMVH-----SQPLPSIVDFTRLLTATANLR 85
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFN 270
RY+ + + M+ YG+ D + ++L+ + + + A V + K S F
Sbjct: 86 RYETVIYFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFG 145
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
L+HG+C ++ DA + M + G+ P+VV Y I+ C+ + + L EM++K
Sbjct: 146 SLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKK 205
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G V+TY ++ L + + ++A ++ M PD +++LI + K G + +A
Sbjct: 206 GLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEA 265
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E++++M + V PN +TYN++I+ C +A K M C P+ TY L+
Sbjct: 266 QELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISG 325
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+ + + L M + D TY +L+ G + GKL +A F M+S+ + P
Sbjct: 326 FCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPD 385
Query: 511 HSTYKMLEEKL 521
T+ +L L
Sbjct: 386 IITHCILLHGL 396
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 154/331 (46%), Gaps = 9/331 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + ++ + + ++D + + M+ G+ D + ++L+ + + + A +
Sbjct: 603 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 662
Query: 256 -----LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
L F+ I + N G+C+ + +A + M GF P+VV Y I
Sbjct: 663 GKMMKLGFRPSIVTLGSLLN----GFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVING 718
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
C+ +D + M++KG + +TY ++ L + + +A ++ M P+
Sbjct: 719 LCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 778
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
F+++LI K G + +A ++++M ++ VVPNV TYN++I+ C +A +
Sbjct: 779 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 838
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
M C PD TY L+ C+ KR++ L M + DA TY +L+ G ++G
Sbjct: 839 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 898
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
KL +A F M+ G+ P TY +L + L
Sbjct: 899 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 929
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 154/357 (43%), Gaps = 37/357 (10%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
++GY +YNT++D L K+ + + EL+ EM++ G + T +T++ L GR
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLG-ADVVTYNTLLTGLCYSGR 226
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDCIPLSSQIFNI 271
+ DA R M K + D + L+D VK GN
Sbjct: 227 WSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGN------------------------- 261
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+D+AQ+ KEM Q P+ V+Y I C T M KG
Sbjct: 262 ----------LDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKG 311
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C P+V+TY ++ K + ++E +K++++M + D Y++LI + G+++ A
Sbjct: 312 CFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVAL 371
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+IF M + V P+++T+ ++ C E E+AL M E Y ++
Sbjct: 372 DIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGL 431
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+ +++ L + V DA TY ++ GL ++G A M +GI+
Sbjct: 432 CKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGII 488
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 148/304 (48%), Gaps = 10/304 (3%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G++ +YNT+++ L K++ E+ M++ T +T++ L GR+ D
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK-KGIRADAVTYNTLISGLSNSGRWTD 762
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILI 273
A R M K ++ + + L+DT VK ++ A ++ E + +P + +N LI
Sbjct: 763 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP-NVFTYNSLI 821
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEK 330
+G+C + DA+ M +G PDVV+Y I +C+ K +V+D +K EM +
Sbjct: 822 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK---RVEDGMKLFCEMTYQ 878
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G TY ++H +A ++N A KV+ +M PD Y+ L+ L G+++ A
Sbjct: 879 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 938
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ ED++K + +++TYN +I C + + A L + + KPD Y ++
Sbjct: 939 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 998
Query: 451 CCRK 454
CRK
Sbjct: 999 LCRK 1002
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/413 (22%), Positives = 182/413 (44%), Gaps = 12/413 (2%)
Query: 133 TLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNN 192
LRR+ + +F+ G H + ++ + + ++ +M +L
Sbjct: 83 NLRRYETVI-----YFSQKMELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKL-- 135
Query: 193 GY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
GY S+ T +++ R DA M K G E + + L+D L K + A
Sbjct: 136 GYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIA 195
Query: 252 YKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
++ E K + +N L+ G C + + DA + +++M ++ +PDVV++T I+
Sbjct: 196 LELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDV 255
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
+ ++ + + + KEM + P+ +TY +++ L ++ +A K ++ M S C P+
Sbjct: 256 FVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPN 315
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
Y++LI K V + ++F+ M +G ++ TYNT+I C + AL +
Sbjct: 316 VVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFC 375
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
M PD T+ LL C ++ M +++ + Y ++ GL ++
Sbjct: 376 WMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKAD 435
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
K+E A F + +G+ P TY ++ L K + ++L+ KE+
Sbjct: 436 KVEKAWELFCRLPVEGVKPDARTYTIMILGLCKN---GPRREADELIRRMKEE 485
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA EM Q P +V +T + + F V +M+ G + ++T
Sbjct: 584 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I++H + +++ AL + KM P SL+ + R ++A + + M
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G VPNV+ YNT+I+ C + NAL++ ME+ + D TY L+ R
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M K + + + +L+ ++ G L A + ++EMI + +VP TY L
Sbjct: 764 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 820
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 85/379 (22%), Positives = 157/379 (41%), Gaps = 47/379 (12%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ + G+ A++ F M V D +L+ L +E A F +
Sbjct: 353 TYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDM 412
Query: 259 KDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
++ + +NI+IHG CK KV+ A + + +G PD +YT I C+
Sbjct: 413 RESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPR 472
Query: 318 RKVDDTLKEMQEKG--CKPSVITYTIVMHALGKAKQINEALK-VYEKMKSDDC----LPD 370
R+ D+ ++ M+E+G C+ + + H+ K+I+ +L+ ++E+ KS+ L
Sbjct: 473 READELIRRMKEEGIICQMNAEDDHLEEHS-SSNKEISLSLREIWERSKSNPFWMQRLIP 531
Query: 371 TSFYSSLI------FILSKAG-------------------------------RVKDANEI 393
+F SS+ ++L + G + DA +
Sbjct: 532 IAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIKFDDAFSL 591
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
F +M + +P+++ + +++ ++ + + L KME D ++ L+ CR
Sbjct: 592 FCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCR 651
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
R+ + LL M K T SL+ G + + + A S + M G VP
Sbjct: 652 CSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVI 711
Query: 514 YKMLEEKLEKKR-LGNAKE 531
Y + L K R L NA E
Sbjct: 712 YNTVINGLCKNRDLNNALE 730
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 90/206 (43%), Gaps = 2/206 (0%)
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM PS++ +T ++ A ++ + +KM+ D ++ LI +
Sbjct: 61 EMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRCS 120
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
R+ A + M K G P+++T+ +++ C + +A L+ M + +P+ Y
Sbjct: 121 RLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVYN 180
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ C+ + + LL M K + D TY +L+ GL SG+ A +M+ +
Sbjct: 181 TLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMKR 240
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKE 531
I P T+ L + K+ GN E
Sbjct: 241 SINPDVVTFTALIDVFVKQ--GNLDE 264
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 1/152 (0%)
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
R +DA +F +M +P+++ + ++++ E + QKME D ++
Sbjct: 51 RFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFT 110
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ CR R+ +L M K T+ SL+ G ++ A S M+
Sbjct: 111 ILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKS 170
Query: 506 GIVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
G P Y L + L K L A E +N++
Sbjct: 171 GYEPNVVVYNTLIDGLCKNGELNIALELLNEM 202
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 189/405 (46%), Gaps = 30/405 (7%)
Query: 145 FGFFTW--AKTQTGYMHTPEMYNTMVDVLGKSKKFC----LMWELVKEMDELNNGYVSLA 198
F FFTW + + + HT Y TM+ L + F L+ +V + + V A
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMFSEAKSLLQVVVSRKGKGSASAVFAA 60
Query: 199 TMST-------------IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
+ T ++ + G DA+E +R +++ + +++ L+K
Sbjct: 61 ILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEYLMKL 120
Query: 246 NSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+ + + E +C P S FNIL+H +CK + AQ + + G P VSY
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSY 180
Query: 305 TCFIEHYCR----EKDFRKVDDTLKE-MQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+ Y R ++ FR LK M G +P V TY+++++ L K ++++A +++
Sbjct: 181 NTLMNGYIRLGVLDEGFR-----LKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELF 235
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
++M +P+ +++LI K GRV A EI++ M Q ++P+++TYNT+I C +
Sbjct: 236 DEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKK 295
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ + A L+ M KPD TY L+ CC++ + M + ++ +D Y
Sbjct: 296 GDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVY 355
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+L+ GL + G+ A EM+S G+ P TY M+ + KK
Sbjct: 356 TALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKK 400
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 128/255 (50%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S + +T+M +R G D+ M GV+ D SVL++ L K + ++ A ++F
Sbjct: 176 SAVSYNTLMNGYIRLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELF 235
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K +P + F LI G CK +VD A + K+M Q PD+++Y I C+
Sbjct: 236 DEMLVKGLVP-NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCK 294
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ D + +M KG KP ITYT ++ K ++ A + ++M ++ D
Sbjct: 295 KGDLKQAHDLIDDMSRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVV 354
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P+ TY +I+ C + + KLL++M+
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 434 EDLCKPDCETYAPLL 448
D P TY L+
Sbjct: 415 RDGHVPSVVTYNVLM 429
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 95/364 (26%), Positives = 179/364 (49%), Gaps = 4/364 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ P + T++ L + +F ++EM L N + ++T++ L + G++ D
Sbjct: 416 GFSINPGAFTTIIHWLCMNSRFESALRFLREM-LLRNMRPNDGLLTTLVGGLCKEGKHSD 474
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIH 274
AVE + + + G + + L+ L K +++ A ++ + + L +N LI
Sbjct: 475 AVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLIS 534
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G CK KV++ K EM +QG PD +Y I CR + + E + + P
Sbjct: 535 GCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP 594
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V TY +++ KA +I E K++ ++ + + ++ Y++LI + G +A ++
Sbjct: 595 NVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLH 654
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+DM+ +G+ P TY+++I C E+A L+ +M ++ P+ Y L+ C+
Sbjct: 655 DDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKL 714
Query: 455 KRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
+M KV+N +L M D+ + TY ++ G +SG ++ A EM+ KGIVP T
Sbjct: 715 GQMDKVVN-VLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVT 773
Query: 514 YKML 517
Y +L
Sbjct: 774 YNVL 777
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 162/356 (45%), Gaps = 2/356 (0%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+ T+V L K K EL + E G +L T + ++ L + G +AV +
Sbjct: 458 LLTTLVGGLCKEGKHSDAVELWFRLLEKGFG-ANLVTTNALIHGLCKTGNMQEAVRLLKK 516
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M + G D + L+ K VE +K+ E K I + +N+LIHG C+ K
Sbjct: 517 MLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGK 576
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A E + P+V +Y I+ YC+ + + E+ + + + + Y
Sbjct: 577 LDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNT 636
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ A + EA K+++ M+S P T+ YSSLI + GR++DA + ++M+K+G
Sbjct: 637 LIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEG 696
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
++PNV+ Y +I C + + + +LQ+M P+ TY ++ + MK
Sbjct: 697 LLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAA 756
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + D TY L G + GK+E + M +G+ TY L
Sbjct: 757 KLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTL 812
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 173/361 (47%), Gaps = 4/361 (1%)
Query: 160 TPEMY--NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
+P++Y +T ++ K K +L +M++L ++ T + ++ L + G D+A
Sbjct: 243 SPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVS-PNVVTYNNLIHGLCKHGNLDEAF 301
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGW 276
M K GV SVL++ L+K A V E + + ++N LI G+
Sbjct: 302 RFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGY 361
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
CK + DA + +M +G +P+ V+ I+ +C+ + + L+EM +G +
Sbjct: 362 CKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINP 421
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+T ++H L + AL+ +M + P+ ++L+ L K G+ DA E++
Sbjct: 422 GAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFR 481
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
+ ++G N++T N +I C + A++LL+KM E D TY L+ CC++ +
Sbjct: 482 LLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGK 541
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ L M K + D TY L+ G+ GKL+ A + + E S+ +VP TY +
Sbjct: 542 VEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 601
Query: 517 L 517
+
Sbjct: 602 M 602
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 166/354 (46%), Gaps = 5/354 (1%)
Query: 186 EMDELNNGYVSLATMSTIMRRL---VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTL 242
+++E+ V++A + ++ R + +A+ FR + GV + + L+ +L
Sbjct: 163 DLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSL 222
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
VK N +E +Y VF + + +F+ I+ +CK KV+DA + +M + G SP+VV
Sbjct: 223 VKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVV 282
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+Y I C+ + + ++M + G ++ITY+++++ L K ++ NEA V ++
Sbjct: 283 TYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKET 342
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
P+ Y++LI K G + DA I DM +G+ PN +T N++I C +
Sbjct: 343 LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM 402
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
E A +L++M + + ++ C R + L M ++ + G +L
Sbjct: 403 EQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTL 462
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKL 536
V GL + GK A + ++ KG T L L K GN +E + L
Sbjct: 463 VGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKT--GNMQEAVRLL 514
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 156/324 (48%), Gaps = 6/324 (1%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGM 223
N ++ L K+ L+K+M L G+V T +T++ + G+ ++ + M
Sbjct: 495 NALIHGLCKTGNMQEAVRLLKKM--LERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 552
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRK 281
K G+E DT ++L+ + + ++ A ++ E K D +P + + ++I G+CK K
Sbjct: 553 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVP-NVYTYGVMIDGYCKADK 611
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+++ +K E+ Q + V Y I YCR + + +M+ KG P+ TY+
Sbjct: 612 IEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSS 671
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H + ++ +A + ++M+ + LP+ Y++LI K G++ + ++M
Sbjct: 672 LIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYD 731
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ PN +TY MI + + A KLL +M PD TY L C++ +++
Sbjct: 732 IHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGF 791
Query: 462 FLLTHMFKNDVSMDAGTYASLVRG 485
+ +M + + +D TY +LV G
Sbjct: 792 KICDYMSQEGLPLDEITYTTLVHG 815
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 169/335 (50%), Gaps = 3/335 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ + +TI+ L + R + AV+ M+ E ++ +LMD L K VE A ++
Sbjct: 10 IVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLG 69
Query: 257 EFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E K + + +++ LI G+C +D + EM ++G SP+VV Y+C I +C++
Sbjct: 70 EMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKG 129
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+R+ L M E+G +P V TYT ++ L K + +AL +++ M P T Y+
Sbjct: 130 LWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYN 189
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
LI L K G + DA +IFE M ++G V++YNT+I C + + A+KL + ED
Sbjct: 190 VLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLED 249
Query: 436 --LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+PD T+ +++ C++ R+ + M + + T L+ I+SG ++
Sbjct: 250 GNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIID 309
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGN 528
A ++ + G+VP +TY ++ + K + N
Sbjct: 310 KAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLN 344
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 164/324 (50%), Gaps = 7/324 (2%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--- 255
T + ++ L + GR A++ F M + G E T +VL++ L K + A+K+F
Sbjct: 152 TYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETM 211
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQG--FSPDVVSYTCFIEHYCR 313
LE + + S +N LI G C K+D+A K + + G PDV+++ I+ C+
Sbjct: 212 LEKGKRLEVVS--YNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCK 269
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E K + M E+G ++ T I++ K+ I++A+++++++ +P ++
Sbjct: 270 EGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTT 329
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
YS +I K + A +F MK G+ P + YNT+++S C S E A +L Q+M+
Sbjct: 330 YSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMK 389
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E C+PD ++ ++ + + LL M + ++ DA TY+S + L + G++E
Sbjct: 390 ESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQME 449
Query: 494 LACSFFEEMISKGIVPYHSTYKML 517
A F+ MI+ GI P + Y L
Sbjct: 450 EAKGAFDSMIASGITPDNHVYDSL 473
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 4/218 (1%)
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PD+VSY I C+EK K D L EM+ C+P+ TY I+M L K ++ EA+++
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
+MK D YS+LI G + +F++M ++G+ PNV+ Y+ +I+ C
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ A +L M E +PD TY ++ C+ R + L M + T
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 479 YASLVRGLIESGKLELACSFFEEMISKG----IVPYHS 512
Y L+ GL + G + A FE M+ KG +V Y++
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNT 225
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 138/293 (47%), Gaps = 6/293 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFR 221
YNT++ L + K +L + E N YV + T +T+++ L + GR D AVE +
Sbjct: 223 YNTLIMGLCNNGKLDEAMKLFSSLLEDGN-YVEPDVITFNTVIQGLCKEGRLDKAVEIYD 281
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKT 279
M + G + +L+ +K ++ A +++ +P SS ++++I G+CK
Sbjct: 282 TMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVP-SSTTYSVMIDGFCKM 340
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++ A+ M G SP + Y + C+E + +EM+E C+P I++
Sbjct: 341 HMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISF 400
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
I++ KA I+ A ++ M+ PD YSS I LSK G++++A F+ M
Sbjct: 401 NIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIA 460
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
G+ P+ Y+++I E E + LL++M + D E +L C
Sbjct: 461 SGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVILDLEITNSILTFLC 513
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 161/362 (44%), Gaps = 10/362 (2%)
Query: 153 TQTGYMHTPEMYNTMVDVL---GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
T+ G Y M+ L G+++K +++L+ E E S T + ++ L +
Sbjct: 142 TERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGE----EPSTVTYNVLINGLCK 197
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSS 266
G DA + F M + G + + + L+ L ++ A K+F LE + +
Sbjct: 198 EGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDV 257
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
FN +I G CK ++D A + M ++G ++ + I Y + K + K
Sbjct: 258 ITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKR 317
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
+ + G PS TY++++ K +N A ++ +MK P Y++L+ L K
Sbjct: 318 VHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKESS 377
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
++ A +F++MK+ P+ +++N MI + +A +LL M++ PD TY+
Sbjct: 378 LEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSS 437
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
+ + +M+ M + ++ D Y SL++G + ++E + +M G
Sbjct: 438 FINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMG 497
Query: 507 IV 508
++
Sbjct: 498 VI 499
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 4/268 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++ L K + E+ M E + +L T ++ ++ G D A+E ++ +
Sbjct: 260 FNTVIQGLCKEGRLDKAVEIYDTMIE-RGSFGNLFTCHILIGEYIKSGIIDKAMELWKRV 318
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF--NILIHGWCKTRK 281
K G+ + SV++D K + + A +F K LS +F N L+ CK
Sbjct: 319 HKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMK-ISGLSPTLFDYNTLMASLCKESS 377
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++ A++ +EM + PD +S+ I+ + D + L +MQ+ G P TY+
Sbjct: 378 LEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSS 437
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L K Q+ EA ++ M + PD Y SLI +++ + M G
Sbjct: 438 FINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMG 497
Query: 402 VVPNVLTYNTMISSACARSEEENALKLL 429
V+ ++ N++++ C +E + ++LL
Sbjct: 498 VILDLEITNSILTFLCNSAEHLHVMELL 525
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 107/209 (51%), Gaps = 1/209 (0%)
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P +++Y +++ L K K++ +A+ + +M+ C P++ Y L+ L K GRV++A +
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCR 453
+MK++G+ +V+ Y+T+IS C++ + L +M E P+ Y+ L+ C+
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 454 KKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHST 513
K + +L M + + D TY ++ GL + G+ A F+ M KG P T
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 514 YKMLEEKLEKKR-LGNAKERINKLLAHAK 541
Y +L L K+ +G+A + +L K
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGK 216
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%)
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
MK+ ++P++++YNT+I+ C E A+ LL +ME C+P+ TY L+ C++ R
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ LL M + + +D Y++L+ G G L+ + F+EM+ KGI P Y
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 517 LEEKLEKKRL 526
L KK L
Sbjct: 121 LINGFCKKGL 130
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%)
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
MK + LPD Y+++I L K R++ A ++ +M+ PN TY ++ C
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
E A++LL +M+ + D Y+ L+ C K + L M + +S + Y+
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
L+ G + G A + M +GI P TY
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTY 153
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 164/329 (49%), Gaps = 5/329 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMK--KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
S ++ + G DA+E FR + K+ V DT +++ +K + + +
Sbjct: 68 VFSGLITAYLESGFLHDALECFRLTREHKFWVPFDT--CRKVLEHFMKLKYFKLVWGFYK 125
Query: 257 EFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E +C P S FNIL+H +CK ++ AQ E+ + G P VVS+ + Y R
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLG 185
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
D + M G +P V TY+++++ L K ++N+A +++ +M + +P+ ++
Sbjct: 186 DLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFT 245
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI K G + A E +++M +QG P+++TYNT+I C + + + A L+ +M
Sbjct: 246 TLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMK 305
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
KPD TY L+ C++ ++ + M K ++ +D Y +L+ GL G+ A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDA 365
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
EM+S G+ P + TY M+ + KK
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKK 394
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 126/242 (52%), Gaps = 3/242 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K + + A ++F
Sbjct: 170 SVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMNDANELF 229
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E +P + F LI G CKT +D A + KEM +QGFSPD+++Y I C+
Sbjct: 230 GEMIGNGLVP-NGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLIYGLCK 288
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ D + EM KG KP ITYT ++ K + AL ++M ++ D
Sbjct: 289 KGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIRLDDVA 348
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + G+ DA ++ +M G+ P+ TY +I+ C + + + KLL++M+
Sbjct: 349 YTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQ 408
Query: 434 ED 435
D
Sbjct: 409 RD 410
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 145/338 (42%), Gaps = 37/338 (10%)
Query: 173 KSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
K K F L+W KE+ L GY SL + +M R + G A F + K+G+
Sbjct: 113 KLKYFKLVWGFYKEI--LECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPS 170
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKE 291
+ FN L++G+ + +D+ +
Sbjct: 171 VVS----------------------------------FNTLMNGYIRLGDLDEGFRLKSA 196
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M G PDV +Y+ I C+E ++ EM G P+ +T+T ++ K
Sbjct: 197 MHASGVQPDVYTYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGS 256
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
I+ A++ Y++M PD Y++LI+ L K G +K A ++ ++M +G+ P+ +TY T
Sbjct: 257 IDLAMETYKEMLRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT 316
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I +C + E AL ++M ++ + D Y L+ CR+ + +L M
Sbjct: 317 LIDGSCKEGDLETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVG 376
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ D GTY ++ + G ++ +EM G VP
Sbjct: 377 LKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVP 414
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 101/211 (47%), Gaps = 1/211 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE- 257
T S ++ L + + +DA E F M G+ + + L+D K S++ A + + E
Sbjct: 208 TYSVLINGLCKESKMNDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEM 267
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ +N LI+G CK + AQ + EM +G PD ++YT I+ C+E D
Sbjct: 268 LRQGFSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDL 327
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
K M ++ + + YT ++ L + Q +A K+ +M S PD Y+ +
Sbjct: 328 ETALYYRKRMIKENIRLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMI 387
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
I K G VK +++ ++M++ G VP V+T
Sbjct: 388 INEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 106/386 (27%), Positives = 181/386 (46%), Gaps = 26/386 (6%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y T+V L K ++F E++ EM E G+V S A +S ++ L + G A +
Sbjct: 288 YCTLVLGLCKVEEFEAGEEMMNEMIEF--GFVPSEAAVSNLVDGLRKKGNIGSAFDLVNK 345
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
+KK+GV + L++++ K ++ A +F + K P + ++ILI +CK
Sbjct: 346 VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFP-NDVTYSILIDSFCKRG 404
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+D A + +M + G V Y+ I +C+ R EM G KP+V+ YT
Sbjct: 405 KLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYT 464
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K +++ A ++Y +M P+T +++LI L A R+ +AN++F +M +
Sbjct: 465 SLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEW 524
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
V+PN +TYN +I C A +LL +M E PD TY PL+ C R+
Sbjct: 525 NVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSE- 583
Query: 461 NFLLTHMFKNDVSM-------------DAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
F ND+ + TY +L+ GL + G ++ A EM++
Sbjct: 584 ----AREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNS 639
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKERI 533
+P +TY + L + GN ++ I
Sbjct: 640 LPNQNTYACFLDYLTSE--GNIEKAI 663
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 160/349 (45%), Gaps = 8/349 (2%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF- 255
+ T+S ++ L+R ++ A+ F + G+ D + ++ +L + A +V
Sbjct: 180 IRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIG 239
Query: 256 -LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+E C LS +N+ I G CK ++V +A + + +G DV +Y + C+
Sbjct: 240 RMESSGC-DLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKV 298
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
++F ++ + EM E G PS + ++ L K I A + K+K P Y
Sbjct: 299 EEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVY 358
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI + K G++ +A +F +M +G+ PN +TY+ +I S C R + + AL L KM E
Sbjct: 359 NALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTE 418
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
K Y+ L+ C+ +++ L M N + + Y SL+ G + G+L
Sbjct: 419 VGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHN 478
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAKE 542
A + EM KGI P T+ L L R+ A NKL E
Sbjct: 479 AFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEA----NKLFGEMVE 523
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 179/380 (47%), Gaps = 13/380 (3%)
Query: 148 FTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRR 206
F T+ G T Y++++ K K L EM + NG ++ ++++
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEM--IANGLKPNVVIYTSLISG 469
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS 266
+ G +A + M G+ +T + L+ L N + A K+F E + + +
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529
Query: 267 QI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC---REKDFRKVDD 322
++ +N+LI G CK A + + EM ++G PD +Y I C R + R+ +
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMN 589
Query: 323 TLKEMQEK-----GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
L+ Q+K GC P+V+TYT +++ L K +++A + +M + + LP+ + Y+
Sbjct: 590 DLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACF 649
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ L+ G ++ A ++ D+ +G + N +TYN +I C + A ++L M +
Sbjct: 650 LDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGI 708
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PDC +Y+ ++ CR+ +K L M V+ D Y L+ G +G+L A
Sbjct: 709 SPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFE 768
Query: 498 FFEEMISKGIVPYHSTYKML 517
++M+ +G+ P +TY L
Sbjct: 769 LRDDMMRRGVKPNRATYNSL 788
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 95/196 (48%), Gaps = 2/196 (1%)
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
E + C+P + + LI+G CK +D A+ +EM P+ +Y CF+++ E +
Sbjct: 600 EIEGCLP-NVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGN 658
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
K L ++ +G + +TY I++ K +I EA +V M PD YS+
Sbjct: 659 IEKAIQ-LHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 717
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I+ + G +K+A +++E M +GV P+ + YN +I C E A +L M
Sbjct: 718 IIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 777
Query: 437 CKPDCETYAPLLKMCC 452
KP+ TY L+ C
Sbjct: 778 VKPNRATYNSLIHGTC 793
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 145/333 (43%), Gaps = 22/333 (6%)
Query: 214 DDAVEAFRGMKKYGVEKD----TRALSVLMDTLVKGN-----------------SVEHAY 252
DD+ A R G+ K+ T + +L+ LV+ N + E +
Sbjct: 71 DDSRLALRFFNFLGLHKNFDHSTTSFCILIHALVQSNLYWPASSLLQTLLLRGLNPEGLF 130
Query: 253 KVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
+ FL+ ++ C ++ F++LI + + R+ D ++ M G P + + + +
Sbjct: 131 ESFLDSYRKCNFSTTLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGL 190
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
R + FR E+ G +P V YT V+ +L + K A +V +M+S C
Sbjct: 191 IRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSV 250
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
+ Y+ I L K RV +A EI + +G+ +V TY T++ C E E +++ +
Sbjct: 251 ATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNE 310
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M E P + L+ +K + L+ + K V+ Y +L+ + + GK
Sbjct: 311 MIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGK 370
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
L+ A S F M KG+ P TY +L + K+
Sbjct: 371 LDEAESLFNNMGHKGLFPNDVTYSILIDSFCKR 403
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 90/194 (46%)
Query: 185 KEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
++++E+ ++ T + ++ L + G D A R M + + +D L
Sbjct: 596 QKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTS 655
Query: 245 GNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
++E A ++ + ++ +NILI G+CK ++ +A + + M G SPD +SY
Sbjct: 656 EGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISY 715
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ I YCR D ++ + M +G P + Y +++ ++ +A ++ + M
Sbjct: 716 STIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMR 775
Query: 365 DDCLPDTSFYSSLI 378
P+ + Y+SLI
Sbjct: 776 RGVKPNRATYNSLI 789
>gi|297830178|ref|XP_002882971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328811|gb|EFH59230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 642
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 136/543 (25%), Positives = 232/543 (42%), Gaps = 62/543 (11%)
Query: 47 SLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISS-----RVLSENHETDVDKIS 101
+LP + F Q+ +E + S+ ES + EK ++S R+L E +I
Sbjct: 17 TLPYLSQRF-KQTENEIVQMFSIPNHEESEKPQEKWKLSRKDPSVRMLDER----FIRIV 71
Query: 102 KILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTP 161
KI K +K +E LK + V + LV L ++ FF WA + + H
Sbjct: 72 KIF-KWGPDAEKALEVLK---LKVDHRLVRSILE-IDVEINVKIQFFKWAGKRRNFQHDC 126
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA--TMSTIMRRLVRGGRYDDAVEA 219
Y ++ L +++ + M+ ++E+ + N YVS+ +S +++ L R A+
Sbjct: 127 STYMALIRCLEEARLYGEMYRTIQEV--VRNTYVSVGPVVLSELVKALGRAKMVSKALSV 184
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQIFNILIHGW 276
F K + + + ++ L++ E ++V+ E DC P + ++ LI +
Sbjct: 185 FYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP-DTITYSALISSY 243
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
K + D A + EM P YT + Y + K D +EM+ GC P+V
Sbjct: 244 EKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSPTV 303
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
TYT ++ LGKA ++ EA +Y+ M +D PD F ++L+ IL K GR+++ +F +
Sbjct: 304 YTYTELIKGLGKAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNE 363
Query: 397 ------------------------------------MKKQGVVPNVLTYNTMISSACARS 420
MK GV P+ TY+ +I C +
Sbjct: 364 MGTWRCTPTVVSYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTN 423
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
E AL LL++M+E P Y L+ + KR + N L + +N ++ + YA
Sbjct: 424 RVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYA 483
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHA 540
+++ + GKL A F EM ++G P Y L + K + N N LL
Sbjct: 484 VMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVN---EANSLLRKM 540
Query: 541 KEQ 543
+E
Sbjct: 541 EEN 543
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 93/350 (26%), Positives = 162/350 (46%), Gaps = 5/350 (1%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
T ++Y T++ + K K +L +EM ++ T + +++ L + GR ++A +
Sbjct: 267 TEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCS-PTVYTYTELIKGLGKAGRVEEAYDL 325
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWC 277
++ M G+ D L+ LM+ L K +E VF E C P +N +I
Sbjct: 326 YKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVVS-YNTVIKALF 384
Query: 278 KTRK-VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+++ V + +M G SP +Y+ I+ YC+ K L+EM EKG P
Sbjct: 385 ESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCP 444
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
Y +++ALGKAK+ A ++++++K + + Y+ +I K G++ +A ++F +
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
MK QG P+V YN ++S A LL+KMEE+ C D ++ +L R
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHNIILNGFARTGV 564
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
+ + M + D TY +L+ +G E A EM KG
Sbjct: 565 PRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDKG 614
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 99/398 (24%), Positives = 162/398 (40%), Gaps = 43/398 (10%)
Query: 160 TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
T YN+++ +L + + + E+ EM + + T S ++ + GR D A+
Sbjct: 196 TSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALISSYEKLGRNDSAIRL 255
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWC 277
F MK ++ + + L+ K VE A +F E K C P + + LI G
Sbjct: 256 FDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSP-TVYTYTELIKGLG 314
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K +V++A K M G +PDVV + + ++ + EM C P+V+
Sbjct: 315 KAGRVEEAYDLYKNMLTDGLTPDVVFLNNLMNILGKVGRLEELTNVFNEMGTWRCTPTVV 374
Query: 338 TYTIVMHALGKAKQ-INEALKVYEKMKSDDCLPDTSFYS--------------------- 375
+Y V+ AL ++K ++E ++KMK+D P YS
Sbjct: 375 SYNTVIKALFESKAPVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLEE 434
Query: 376 --------------SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS--SACAR 419
SLI L KA R + ANE+F+++K+ + Y MI C +
Sbjct: 435 MDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGK 494
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
E A+ L +M+ PD Y L+ + + N LL M +N + D ++
Sbjct: 495 LSE--AVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSH 552
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ G +G A FE M GI P TY L
Sbjct: 553 NIILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTL 590
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 127/264 (48%), Gaps = 5/264 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA--TMSTIMRRLVRGGRYDDAVEAFR 221
YNT++ L +SK + E+ D++ VS + T S ++ + R + A+
Sbjct: 376 YNTVIKALFESK--APVSEVSSWFDKMKADGVSPSEFTYSILIDGYCKTNRVEKALLLLE 433
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP-LSSQIFNILIHGWCKTR 280
M + G A L++ L K E A ++F E K+ +SS+++ ++I + K
Sbjct: 434 EMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCG 493
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K+ +A EM QG PDV +Y + + + + L++M+E GC + ++
Sbjct: 494 KLSEAVDLFNEMKNQGSGPDVYAYNALMSGMVKAGMVNEANSLLRKMEENGCTADINSHN 553
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + A++++E MK PD Y++L+ + AG ++A + +MK +
Sbjct: 554 IILNGFARTGVPRRAIEMFETMKHCGIKPDGVTYNTLLGCFAHAGMFEEAARLMREMKDK 613
Query: 401 GVVPNVLTYNTMISSACARSEEEN 424
G + +TY++++ + E++
Sbjct: 614 GFEYDAITYSSILDAVGNMDHEKD 637
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 181/349 (51%), Gaps = 12/349 (3%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S A + T + V+ G+ A + F+ MK+ + + + L+++LV+ S
Sbjct: 134 SKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSR 193
Query: 256 LEFKDCIPL----SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
F D I L + FNI+I+G+C K DA + + M + SPD V+Y ++
Sbjct: 194 EAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTL 253
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C++ D L +M+ +G P+ TY I+++ K + EA V E M ++ LPD
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y+ LI L GR+++A ++ ++M+ ++P+V++YNT+I+ S+ A KLL++
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEE 373
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M E KP+ T+ ++K C++ +M + +T M ++ S D TY +L+ G ++G
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433
Query: 492 LELACSFFEEMISKGI----VPYHSTYKML--EEKLEK--KRLGNAKER 532
+ A +EM K + V ++ + L E+KLE+ K L +A++R
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR 482
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 147/305 (48%), Gaps = 3/305 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIF 269
++ DAVE M KY D + ++DTL K + A + ++ K +P + +
Sbjct: 223 KFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLP-NRNTY 281
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
NIL++G+CK + +A ++ M Q PDV +Y I C E + EM+
Sbjct: 282 NILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMEN 341
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
P V++Y +++ + +I+EA K+ E+M P+ ++ ++ K G++ D
Sbjct: 342 LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDD 401
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A+ M++ G P+ +TYNT+I+ C A + + +M K D T +L+
Sbjct: 402 ASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILR 461
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
CR+K+++ LL+ K +D +Y +L+ G + G ++ A ++EM K I+P
Sbjct: 462 TLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP 521
Query: 510 YHSTY 514
TY
Sbjct: 522 STVTY 526
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 166/348 (47%), Gaps = 2/348 (0%)
Query: 184 VKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
V E+ NN + T + ++ L GR ++A + M+ + D + + L++ +
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCL 359
Query: 244 KGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
+ + + A+K+ E + + ++ NI++ +CK K+DDA + +M + GFSPD V
Sbjct: 360 EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+Y I YC+ + + T+ EM K K +T ++ L + K++ EA K+
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+ D Y +LI K G V A +++++MK++ ++P+ +TYN +I C +
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
E A+ L ++ E PD TY +L CR+ ++ M +N D T L
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNIL 599
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNA 529
+RGL G LE A F +SKG TY L L K+ RL +A
Sbjct: 600 LRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 176/382 (46%), Gaps = 20/382 (5%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN--NGYVSLATMSTIMRRLVRGG 211
++G+ YNT+++ K+ M E + MDE+ N + T++TI+R L R
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGN---MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIF 269
+ ++A + +K G D + L+ K +V+ A K++ E K+ IP S+ +
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP-STVTY 526
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N +I G C+ K + A + E+ + G PD +Y + YCRE D K +M E
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
KP V T I++ L + +ALK++ S DT Y++LI L K GR+ D
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDD 646
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A + +M+++ + P+ TYN +I++ A + + KM E PD +L+
Sbjct: 647 AFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPD-----QVLQ 701
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ K V + + V+ Y+ ++ L GK + A F E KGI
Sbjct: 702 L--DKNETVVTSETSEESDSSSVA-----YSEWIKELCTEGKYKDAMRIFGESKQKGITV 754
Query: 510 YHSTYKMLEEKLEKKRLGNAKE 531
STY L + L K+R +KE
Sbjct: 755 DKSTYINLMDGLIKRRKSISKE 776
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 185/393 (47%), Gaps = 15/393 (3%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
TQ + YN +++ L + ++L EM+ L + + +T++ + +
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLK-LLPDVVSYNTLINGCLEWSK 363
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSS 266
+A + M + GV+ + ++++ K ++ A + + DC+
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV---- 419
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+N LI+G+CK + +A + M EM ++ D V+ + CREK + L
Sbjct: 420 -TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
+++G ++Y ++ K ++ ALK++++MK + +P T Y+ +I L + G+
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ A ++ + G++P+ TYNT++ C + E A + KM E+ KPD T
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNI 598
Query: 447 LLKMCCRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
LL+ C + + K L T + K ++D TY +L+ L + G+L+ A + EM K
Sbjct: 599 LLRGLCMEGVLEKALKLFNTWVSKGK-AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK 657
Query: 506 GIVPYHSTYKMLEEKL-EKKRLGNAKERINKLL 537
+ P H TY + L + R+ A+E ++K+L
Sbjct: 658 ELGPDHYTYNAIITALTDSGRIREAEEFMSKML 690
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P + + I ++G+ A +IF+ MK+ + PN+LT NT+++S R +++
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNS-LVRYPSSHSVSF 191
Query: 429 LQKMEEDLCK----PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
++ D K P+ T+ ++ C + + K L M K + S D TY +++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + G+L A +M S+G++P +TY +L
Sbjct: 252 TLCKKGRLGDARDLLMDMKSRGLLPNRNTYNIL 284
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 143 bits (360), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 89/383 (23%), Positives = 189/383 (49%), Gaps = 3/383 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
GY+ Y T+++ L K+ + L++EM++ ++ +L S ++ L + G D
Sbjct: 155 GYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEK-SSVQPNLVMYSALIDGLCKDGFVSD 213
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIH 274
A+ + + G+ D + L+D + ++ + ++ + FNILI
Sbjct: 214 ALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILID 273
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
CK ++ +AQ + M ++G PD+V+Y +E YC ++ + + M ++G +P
Sbjct: 274 ALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEP 333
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
V+ Y +++ K K ++EA+ +++++ + + +P + Y+SLI L +GR+ ++
Sbjct: 334 DVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLL 393
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
++M P+V+TYN +I + C AL +L M + KP+ TY ++ C +
Sbjct: 394 DEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLR 453
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ V + M K+ + D Y L+ G ++ ++ A F+EM K ++P ++Y
Sbjct: 454 NNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASY 513
Query: 515 KMLEEKL-EKKRLGNAKERINKL 536
L + L R+ + +E ++++
Sbjct: 514 NSLIDGLCNLGRIPHVQELLDEM 536
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 159/344 (46%), Gaps = 3/344 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++ L + GR +A M K G + D + LM+ +V A ++F
Sbjct: 267 TFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326
Query: 259 -KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K + +N+LI G+CKT+ VD+A KE+ + P + SY I+ C
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
V L EM P V+TY I++ AL K +I EAL V M P+ Y+++
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ V A +IF M K G+ P++L YN +I+ C + A+ L ++M
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD +Y L+ C R+ + LL M + S D TY L+ ++ + A S
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566
Query: 498 FFEEMISKGIVP-YHSTYKMLEEKLEKKRLGNAKERINKLLAHA 540
F +++ +GI P +++ + +++ + ++L A++ + LL H
Sbjct: 567 LFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHG 609
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/406 (22%), Positives = 180/406 (44%), Gaps = 38/406 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++D L K + L + V M + T + +M +A E F M
Sbjct: 268 FNILIDALCKEGRI-LEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRM 326
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPL-------------SSQI 268
K G+E D +VL+D K V+ A +F E K+ +P S +I
Sbjct: 327 VKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRI 386
Query: 269 ---------------------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
+NILI CK ++ +A + M ++G P++V+Y
Sbjct: 387 SHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAM 446
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
++ YC + D M + G +P ++ Y ++++ K + ++EA+ ++++M+ +
Sbjct: 447 MDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNL 506
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
+PD + Y+SLI L GR+ E+ ++M G P+V+TYN ++ + C + A+
Sbjct: 507 IPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAIS 566
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L +++ E + PD T ++ C+ +++K+ L H+ + S + TY L+ L
Sbjct: 567 LFRQIVEGIW-PDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC 625
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ G A +M P T++++ L ++ + E++
Sbjct: 626 KDGSFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKL 671
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 78/314 (24%), Positives = 138/314 (43%), Gaps = 1/314 (0%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNIL 272
DDAV F M + T L+ +V+ A +F + + I S F IL
Sbjct: 37 DDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTIL 96
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I+ + A + + + G+ P++V++ I +C K D + + +G
Sbjct: 97 INCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGY 156
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
TY +++ L K QI AL + ++M+ P+ YS+LI L K G V DA
Sbjct: 157 LFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALG 216
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ + ++G++ + +TYN++I C+ + +LL KM + PD T+ L+ C
Sbjct: 217 LCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALC 276
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
++ R+ +L M K D TY +L+ G + A F M+ +G+ P
Sbjct: 277 KEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVL 336
Query: 513 TYKMLEEKLEKKRL 526
Y +L + K ++
Sbjct: 337 NYNVLIDGYCKTKM 350
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 154/341 (45%), Gaps = 2/341 (0%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDC 261
++ +VR G Y A+ F ++ G+ ++L++ + A+ + K
Sbjct: 61 LLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKSG 120
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ FN +I+G+C + A + + QG+ D +Y I + +
Sbjct: 121 YQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAAL 180
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
L+EM++ +P+++ Y+ ++ L K +++AL + ++ L D Y+SLI
Sbjct: 181 HLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGC 240
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
GR ++ ++ M ++ V P+ T+N +I + C A +L M + KPD
Sbjct: 241 CSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDI 300
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L++ C ++ + L M K + D Y L+ G ++ ++ A F+E
Sbjct: 301 VTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKE 360
Query: 502 MISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAK 541
+ +K +VP ++Y L + L R+ + K+ ++++ A+
Sbjct: 361 LCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQ 401
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 126/287 (43%), Gaps = 42/287 (14%)
Query: 156 GYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGR 212
G P++ YN ++D L K + ++ M + G ++ T + +M
Sbjct: 398 GSAQPPDVVTYNILIDALCKEGRILEALGVLVMM--MKKGVKPNIVTYNAMMDGYCLRNN 455
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFN 270
+ A + F M K G+E D +VL++ K V+ A +F E K+ IP + +N
Sbjct: 456 VNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIAS-YN 514
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV---------- 320
LI G C ++ Q+ + EM G SPDV++Y ++ +C+ + F K
Sbjct: 515 SLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEG 574
Query: 321 ------------------------DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEAL 356
+D LK + GC P+V TYTI+++AL K EA+
Sbjct: 575 IWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAM 634
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
+ KM+ +D PD + +I +L + A ++ E+M +G+V
Sbjct: 635 LLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 82/181 (45%), Gaps = 2/181 (1%)
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
H + + +++A+ + +M P TS + L+ + + G A +F ++ +G+
Sbjct: 28 HKNCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGIS 87
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK-MCCRKKRMKVLNF 462
P++ T+ +I+ +S A LL + + +P+ T+ ++ C K L+F
Sbjct: 88 PSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDF 147
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
++ D TY +L+ GL ++G+++ A +EM + P Y L + L
Sbjct: 148 -CQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLC 206
Query: 523 K 523
K
Sbjct: 207 K 207
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 173/363 (47%), Gaps = 4/363 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y ++D L K ++ EM + G + + S++M L R GR +A+E F+
Sbjct: 1088 YGMIIDALCKDGMTTEALDMFSEM--IGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKE 1145
Query: 223 MKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRK 281
M+ G+ D + L+ L + G E + + L + F ILI G CK K
Sbjct: 1146 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 1205
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V +AQ+ ++ M +G PD+++Y + C + + ++G K +V +Y I
Sbjct: 1206 VGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 1265
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ K ++I+EA + +E+M+ P T Y++LI L ++GRV+ A ++F +M+ G
Sbjct: 1266 LINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 1325
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ TY ++ C E A+ L Q +++ KP+ E ++ LL CR +++
Sbjct: 1326 QFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 1385
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ KN + D Y L+ GL G L A +M KG +P T+ ++ + L
Sbjct: 1386 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 1445
Query: 522 EKK 524
K+
Sbjct: 1446 LKE 1448
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 162/324 (50%), Gaps = 8/324 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDEL--NNGYVSLA-TMSTIMRRLVRGGRYDDAVEAF 220
YN+++ L ++ +W+ V L + G+ A T + ++ L + G+ +A +
Sbjct: 1158 YNSLIHGLSRAG----LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 1213
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKT 279
M+ G E D + LM+ L +E A K+F D I L+ +NILI+G+CK
Sbjct: 1214 ELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKD 1273
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+K+D+A + +EM +G P V+Y I C+ R EMQ G + TY
Sbjct: 1274 QKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTY 1333
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+++ L K + EA+ +++ +K + P+ +S L+ + +AG++++A + F+++ K
Sbjct: 1334 CVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISK 1393
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G+ P+ + YN +I+ C + A+KLL +MEE C PD T+ +++ ++ +
Sbjct: 1394 NGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHE 1453
Query: 460 LNFLLTHMFKNDVSMDAGTYASLV 483
LL M + S D + L+
Sbjct: 1454 AIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 170/365 (46%), Gaps = 4/365 (1%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G + +Y++++D L + + E KEM E + T ++++ L R G +
Sbjct: 1114 AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM-EGRGISADVYTYNSLIHGLSRAGLWK 1172
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
+ M G D ++L+D L K V A ++ + K P +N L
Sbjct: 1173 EVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEP-DILTYNTL 1231
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
++G C +++DA K + + +G +V SY I YC+++ + +EM+ KG
Sbjct: 1232 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGL 1291
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
KPS +TY ++ AL ++ ++ A K++ +M++ S Y L+ L K G +++A +
Sbjct: 1292 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMD 1351
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+F+ +KK PN+ ++ ++ C + E A K ++ ++ +PD Y L+ C
Sbjct: 1352 LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLC 1411
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
K + LL M + D+ T+ +++ L++ ++ A EEM ++ P +
Sbjct: 1412 NKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEA 1471
Query: 513 TYKML 517
ML
Sbjct: 1472 VTSML 1476
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 140/298 (46%), Gaps = 10/298 (3%)
Query: 225 KYGVEKDTRALSVLMDTLVKG----NSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKT 279
K G E D +V + TLVKG N + A ++F E K + ++ + ILI+G CK
Sbjct: 1009 KRGFEPD----AVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKA 1064
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
RK A K + E + DV +Y I+ C++ + D EM G P V+ Y
Sbjct: 1065 RKTGLAIK-LHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVY 1123
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+ +M L + ++ EAL+ +++M+ D Y+SLI LS+AG K+ M
Sbjct: 1124 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 1183
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G P+ T+ +I C + A ++L+ M +PD TY L+ C +++
Sbjct: 1184 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLED 1243
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + + ++ +Y L+ G + K++ A FFEEM KG+ P TY L
Sbjct: 1244 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTL 1301
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 111/221 (50%), Gaps = 4/221 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ K +K + +EM S T +T++ L + GR A + F M
Sbjct: 1263 YNILINGYCKDQKIDEAFRFFEEMRP-KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM 1321
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRK 281
+ G VL+D L K +E A +F K + P + ++F+IL+ G C+ K
Sbjct: 1322 QTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKP-NIEVFSILLDGMCRAGK 1380
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+++A K E+ + G PD ++Y I C + + L +M+EKGC P IT+ +
Sbjct: 1381 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 1440
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
++ L K +I+EA+++ E+M++ + PD + S L+ + S
Sbjct: 1441 IIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLAS 1481
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 103/244 (42%), Gaps = 1/244 (0%)
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G PD+ + I C + ++G +P +T T ++ + I +A
Sbjct: 976 GIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDA 1035
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
++++++M L D Y LI L KA + A ++ E MK +V TY +I +
Sbjct: 1036 VQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKGN-CKGDVFTYGMIIDA 1094
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C AL + +M PD Y+ L+ CR R+K M +S D
Sbjct: 1095 LCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISAD 1154
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINK 535
TY SL+ GL +G + F M+ +G P T+ +L + L K+ ++I +
Sbjct: 1155 VYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILE 1214
Query: 536 LLAH 539
L+ H
Sbjct: 1215 LMRH 1218
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 91/231 (39%), Gaps = 9/231 (3%)
Query: 309 EHYCREK---DFRKVDDTLKEMQEKGCK---PSVITYTIVMHALGKAKQINEALKVYEKM 362
E Y R++ K++D +K C P T+ ++ ++ K + +Y K+
Sbjct: 913 ERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKI 972
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
PD + LI V +F K+G P+ +T T++ +
Sbjct: 973 NDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGI 1032
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+A++L +M + D +TY L+ C K R L L K + D TY +
Sbjct: 1033 PDAVQLFDEMTKKGLLGDAKTYGILINGLC-KARKTGLAIKLHEKMKGNCKGDVFTYGMI 1091
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+ L + G A F EMI GI+P Y L + L R G KE +
Sbjct: 1092 IDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL--CRFGRLKEAL 1140
>gi|15231338|ref|NP_187348.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75186627|sp|Q9M907.1|PP217_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g06920
gi|6728999|gb|AAF26996.1|AC016827_7 hypothetical protein [Arabidopsis thaliana]
gi|332640955|gb|AEE74476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 871
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 202/414 (48%), Gaps = 11/414 (2%)
Query: 129 LVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD 188
V LRR D+ A +F W + +T H PE YN+++ V+ + + F + +++ EM
Sbjct: 67 FVIGVLRRLK-DVNRAIEYFRWYERRTELPHCPESYNSLLLVMARCRNFDALDQILGEMS 125
Query: 189 ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
G S+ T ++ V+ + + + + M+K+ A + L+ N
Sbjct: 126 VAGFG-PSVNTCIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHS 184
Query: 249 EHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
+ +F + ++ + +F LI G+ K +VD A + EM D+V Y
Sbjct: 185 DMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVC 244
Query: 308 IEHYCREKDFRKVDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
I+ + + KVD K E++ G KP +TYT ++ L KA +++EA++++E ++
Sbjct: 245 IDSFGK---VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEK 301
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
+ +P T Y+++I AG+ +A + E + +G +P+V+ YN +++ + +
Sbjct: 302 NRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDE 361
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
ALK+ ++M++D P+ TY L+ M CR ++ L M K + + T +V
Sbjct: 362 ALKVFEEMKKD-AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVD 420
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLL 537
L +S KL+ AC+ FEEM K P T+ L + L K R+ +A + K+L
Sbjct: 421 RLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKML 474
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 97/366 (26%), Positives = 178/366 (48%), Gaps = 6/366 (1%)
Query: 160 TPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP+ + +++D LGK + +++ ++M + + S+ S I + GR +D
Sbjct: 444 TPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI-KNFFNHGRKEDGH 502
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHG 275
+ ++ M D + L+ MD + K E +F E K +P ++ ++ILIHG
Sbjct: 503 KIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVP-DARSYSILIHG 561
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
K ++ + M +QG D +Y I+ +C+ K L+EM+ KG +P+
Sbjct: 562 LIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPT 621
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+TY V+ L K +++EA ++E+ KS + YSSLI K GR+ +A I E
Sbjct: 622 VVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILE 681
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
++ ++G+ PN+ T+N+++ + E AL Q M+E C P+ TY L+ C+ +
Sbjct: 682 ELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVR 741
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+ M K + +Y +++ GL ++G + A + F+ + G VP + Y
Sbjct: 742 KFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYN 801
Query: 516 MLEEKL 521
+ E L
Sbjct: 802 AMIEGL 807
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 136/560 (24%), Positives = 230/560 (41%), Gaps = 91/560 (16%)
Query: 30 CNPLCTTAESPSSTESPSLPSWIKFFDSQSPDEDFVIPSLAGWVESHRLNEKSRISSR-- 87
CN L T PS+ + S S+ P +FVI L + +R E R R
Sbjct: 40 CNVLETGPWGPSAENTLSALSF-------KPQPEFVIGVLRRLKDVNRAIEYFRWYERRT 92
Query: 88 ------------VLSENHETDVDKISKILSKQY-----QSPDKVVEALKGCGVSVSNSLV 130
+L + D + +IL + S + +E + GC +N L
Sbjct: 93 ELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNTCIEMVLGC--VKANKLR 150
Query: 131 E-----QTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVK 185
E Q +R+F PAF Y T++ +M L +
Sbjct: 151 EGYDVVQMMRKFK--FRPAF----------------SAYTTLIGAFSAVNHSDMMLTLFQ 192
Query: 186 EMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
+M EL GY ++ +T++R + GR D A+ MK ++ D +V +D+ K
Sbjct: 193 QMQEL--GYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGK 250
Query: 245 GNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
V+ A+K F E + + + + +I CK ++D+A + + + + P +
Sbjct: 251 VGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYA 310
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y I Y F + L+ + KG PSVI Y ++ L K +++EALKV+E+MK
Sbjct: 311 YNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEALKVFEEMK 370
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
D P+ S Y+ LI +L +AG++ A E+ + M+K G+ PNV T N M+ C + +
Sbjct: 371 KD-AAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLD 429
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A + ++M+ +C PD T+ L+ + R+ + M +D ++ Y SL+
Sbjct: 430 EACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLI 489
Query: 484 RGLIESGKLE------------------------LACSF-----------FEEMISKGIV 508
+ G+ E + C F FEE+ ++ V
Sbjct: 490 KNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFV 549
Query: 509 PYHSTYKMLEEKLEKKRLGN 528
P +Y +L L K N
Sbjct: 550 PDARSYSILIHGLIKAGFAN 569
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 104/396 (26%), Positives = 170/396 (42%), Gaps = 36/396 (9%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+YN +D GK K + W+ E+ E N T ++++ L + R D+AVE F
Sbjct: 240 LYNVCIDSFGKVGKVDMAWKFFHEI-EANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEH 298
Query: 223 MKK----------------YG-VEKDTRALSVLMDTLVKGN------------------S 247
++K YG K A S+L KG+
Sbjct: 299 LEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGK 358
Query: 248 VEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
V+ A KVF E K + +NILI C+ K+D A + M + G P+V +
Sbjct: 359 VDEALKVFEEMKKDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIM 418
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
++ C+ + + +EM K C P IT+ ++ LGK ++++A KVYEKM DC
Sbjct: 419 VDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDC 478
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
++ Y+SLI GR +D ++I++DM Q P++ NT + E E
Sbjct: 479 RTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRA 538
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+ ++++ PD +Y+ L+ + L M + +D Y ++ G
Sbjct: 539 MFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFC 598
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ GK+ A EEM +KG P TY + + L K
Sbjct: 599 KCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAK 634
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 155/329 (47%), Gaps = 3/329 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
L ++T M + + G + F +K D R+ S+L+ L+K Y++F
Sbjct: 517 LQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFY 576
Query: 257 EFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
K+ C+ L ++ +NI+I G+CK KV+ A + ++EM +GF P VV+Y I+ +
Sbjct: 577 SMKEQGCV-LDTRAYNIVIDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKI 635
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ +E + K + +V+ Y+ ++ GK +I+EA + E++ P+ +
Sbjct: 636 DRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTW 695
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+SL+ L KA + +A F+ MK+ PN +TY +I+ C + A Q+M++
Sbjct: 696 NSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQK 755
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
KP +Y ++ + + L N D+ Y +++ GL +
Sbjct: 756 QGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMD 815
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
A S FEE +G+ ++ T +L + L K
Sbjct: 816 AFSLFEETRRRGLPIHNKTCVVLLDTLHK 844
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/368 (25%), Positives = 170/368 (46%), Gaps = 12/368 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++D+L ++ K +EL M + + ++ T++ ++ RL + + D+A F M
Sbjct: 380 YNILIDMLCRAGKLDTAFELRDSMQKAGL-FPNVRTVNIMVDRLCKSQKLDEACAMFEEM 438
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDC----IPLSSQIFNILIHGWC 277
D L+D L K V+ AYKV+ + DC I +S I N HG
Sbjct: 439 DYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVYTSLIKNFFNHG-- 496
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ +D K K+M Q SPD+ +++ + + K +E++ + P
Sbjct: 497 ---RKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKARRFVPDAR 553
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
+Y+I++H L KA NE +++ MK C+ DT Y+ +I K G+V A ++ E+M
Sbjct: 554 SYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLEEM 613
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
K +G P V+TY ++I + A L ++ + + + Y+ L+ + R+
Sbjct: 614 KTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRI 673
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+L + + ++ + T+ SL+ L+++ ++ A F+ M P TY +L
Sbjct: 674 DEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGIL 733
Query: 518 EEKLEKKR 525
L K R
Sbjct: 734 INGLCKVR 741
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/349 (28%), Positives = 181/349 (51%), Gaps = 12/349 (3%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S A + T + V+ G+ A + F+ MK+ + + + L+++LV+ S
Sbjct: 134 SKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSR 193
Query: 256 LEFKDCIPL----SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
F D I L + FNI+I+G+C K DA + + M + SPD V+Y ++
Sbjct: 194 EAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDAL 253
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
C++ D L +M+ +G P+ TY I+++ K + EA V E M ++ LPD
Sbjct: 254 CKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDV 313
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y+ LI L GR+++A ++ ++M+ ++P+V++YNT+I+ S+ A KLL++
Sbjct: 314 WTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEE 373
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M E KP+ T+ ++K C++ +M + +T M ++ S D TY +L+ G ++G
Sbjct: 374 MSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGN 433
Query: 492 LELACSFFEEMISKGI----VPYHSTYKML--EEKLEK--KRLGNAKER 532
+ A +EM K + V ++ + L E+KLE+ K L +A++R
Sbjct: 434 MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKR 482
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 166/348 (47%), Gaps = 2/348 (0%)
Query: 184 VKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
V E+ NN + T + ++ L GR ++A + M+ + D + + L++ +
Sbjct: 300 VIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCL 359
Query: 244 KGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
+ + + A+K+ E + + ++ NI++ +CK K+DDA + +M + GFSPD V
Sbjct: 360 EWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+Y I YC+ + + T+ EM K K +T ++ L + K++ EA K+
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479
Query: 363 KSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEE 422
+ D Y +LI K G V A +++++MK++ ++P+ +TYN +I C +
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
E A+ L ++ E PD TY +L CR+ ++ M +N D T L
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNIL 599
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNA 529
+RGL G LE A F +SKG TY L L K+ RL +A
Sbjct: 600 LRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDA 647
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 146/305 (47%), Gaps = 3/305 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIF 269
++ DAVE M KY D + ++D L K + A + ++ K +P + +
Sbjct: 223 KFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLP-NRNTY 281
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
NIL++G+CK + +A ++ M Q PDV +Y I C E + EM+
Sbjct: 282 NILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMEN 341
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
P V++Y +++ + +I+EA K+ E+M P+ ++ ++ K G++ D
Sbjct: 342 LKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDD 401
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A+ M++ G P+ +TYNT+I+ C A + + +M K D T +L+
Sbjct: 402 ASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILR 461
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
CR+K+++ LL+ K +D +Y +L+ G + G ++ A ++EM K I+P
Sbjct: 462 TLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP 521
Query: 510 YHSTY 514
TY
Sbjct: 522 STVTY 526
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/393 (23%), Positives = 185/393 (47%), Gaps = 15/393 (3%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
TQ + YN +++ L + ++L EM+ L + + +T++ + +
Sbjct: 305 TQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLK-LLPDVVSYNTLINGCLEWSK 363
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLSS 266
+A + M + GV+ + ++++ K ++ A + + DC+
Sbjct: 364 ISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV---- 419
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
+N LI+G+CK + +A + M EM ++ D V+ + CREK + L
Sbjct: 420 -TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSS 478
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
+++G ++Y ++ K ++ ALK++++MK + +P T Y+ +I L + G+
Sbjct: 479 ARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGK 538
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
+ A ++ + G++P+ TYNT++ C + E A + KM E+ KPD T
Sbjct: 539 TEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNI 598
Query: 447 LLKMCCRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
LL+ C + + K L T + K ++D TY +L+ L + G+L+ A + EM K
Sbjct: 599 LLRGLCMEGMLEKALKLFNTWVSKGK-AIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEK 657
Query: 506 GIVPYHSTYKMLEEKL-EKKRLGNAKERINKLL 537
+ P H TY + L + R+ A+E ++K+L
Sbjct: 658 ELGPDHYTYNAIITALTDSGRIREAEEFMSKML 690
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 103/382 (26%), Positives = 175/382 (45%), Gaps = 20/382 (5%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN--NGYVSLATMSTIMRRLVRGG 211
++G+ YNT+++ K+ M E + MDE+ N + T++TI+R L R
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGN---MGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREK 467
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIF 269
+ ++A + +K G D + L+ K +V+ A K++ E K+ IP S+ +
Sbjct: 468 KLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP-STVTY 526
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N +I G C+ K + A + E+ + G PD +Y + YCRE D K +M E
Sbjct: 527 NCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVE 586
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
KP V T I++ L + +ALK++ S DT Y++LI L K GR+ D
Sbjct: 587 NSFKPDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDD 646
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A + +M+++ + P+ TYN +I++ A + + KM E P +L+
Sbjct: 647 AFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLP-----XQVLQ 701
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ + ++T + + Y+ ++ L GK + A F E KGI
Sbjct: 702 LDXNET-------VVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITV 754
Query: 510 YHSTYKMLEEKLEKKRLGNAKE 531
STY L + L K+R +KE
Sbjct: 755 DKSTYINLMDGLIKRRKSISKE 776
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 5/153 (3%)
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P + + I ++G+ A +IF+ MK+ + PN+LT NT+++S R +++
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNS-LVRYPSSHSVSF 191
Query: 429 LQKMEEDLCK----PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
++ D K P+ T+ ++ C + + K L M K + S D TY +++
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILD 251
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + G+L A +M S+G++P +TY +L
Sbjct: 252 ALCKKGRLGDARDLLMDMKSRGLLPNRNTYNIL 284
>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
Length = 820
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 163/327 (49%), Gaps = 3/327 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++++ R + + A + F M G +D + + L++ + ++ A ++F E
Sbjct: 166 TFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREM 225
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
L+ G C + ++ +++M + G+ P +Y ++ +CRE+
Sbjct: 226 TQ---PDMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAE 282
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + L EM + G P V+T TIV++A + +++ A++V+E M+ C P+ Y++++
Sbjct: 283 EAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIV 342
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
AG+V A + + M++ GV P+V+TYN +I C +A +LL+ ME +
Sbjct: 343 QGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLA 402
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
D TY L+ C+ ++ L + + ++ T+ +++ GL ++GK ++AC+F
Sbjct: 403 ADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTF 462
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKR 525
E MIS G P TY E L K +
Sbjct: 463 LENMISAGYAPDTYTYSPFIENLCKTK 489
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/360 (23%), Positives = 167/360 (46%), Gaps = 6/360 (1%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G+ Y +++ ++ + EL +EM + + + T + +++ L GR ++
Sbjct: 194 GFSQDAVSYAALIEGFCEAGRIDEALELFREMTQPD-----MYTHAALVKGLCDAGRGEE 248
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF-NILIH 274
+ + MK+ G TRA + L+D + E A K+ E D + + I+++
Sbjct: 249 GLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVN 308
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
+C+ ++ A + + M +G P+V +Y ++ +C K L +M+E G +P
Sbjct: 309 AYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEP 368
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
V+TY +++ I A ++ M+ + D Y+ LI L K G+V +A +F
Sbjct: 369 DVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLF 428
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ ++ +G+ PN +T+NT+I+ C + + A L+ M PD TY+P ++ C+
Sbjct: 429 DGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKT 488
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
K + F + M + DV Y ++ L LA + +M+S+G P TY
Sbjct: 489 KGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTY 548
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 103/397 (25%), Positives = 176/397 (44%), Gaps = 23/397 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +V + K L+ +M E + T + ++R G A R M
Sbjct: 338 YNAIVQGFCNAGKVYKAMALLDQMRECGVE-PDVVTYNLLIRGQCIDGHIGSAFRLLRLM 396
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ G+ D +VL+D L K V+ A +F LE++ P +S FN +I+G CK K
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRP-NSVTFNTVINGLCKAGK 455
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
D A ++ M G++PD +Y+ FIE+ C+ K ++ + EM +K KPS + YTI
Sbjct: 456 FDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTI 515
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V++ L + A +++ +M S C PD Y++ + GR+ +A + +MKK
Sbjct: 516 VINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCR 575
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY---------------AP 446
+ + + YNT+I + + + A+ +L+ M P+ T+ P
Sbjct: 576 TIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVP 635
Query: 447 LLKMCCRKKRMKVLNF--LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
LK K +++ + L M KN V A TY S++ G E +L+ S M
Sbjct: 636 -LKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKE 694
Query: 505 KGIVPYHSTYKMLEEKLEKKRL-GNAKERINKLLAHA 540
+ + Y L K R+ +A + ++ H
Sbjct: 695 ENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHG 731
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 116/253 (45%), Gaps = 4/253 (1%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ +N LI C+ + AQ+ + M + G+ PD ++ I YCR + D
Sbjct: 128 TGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLF 187
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+M +G ++Y ++ +A +I+EAL+++ +M PD +++L+ L A
Sbjct: 188 CKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDA 243
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
GR ++ + + MK+ G P Y ++ C + E A K+L +M + P T
Sbjct: 244 GRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTC 303
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
++ CR+ RM + M + TY ++V+G +GK+ A + ++M
Sbjct: 304 TIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRE 363
Query: 505 KGIVPYHSTYKML 517
G+ P TY +L
Sbjct: 364 CGVEPDVVTYNLL 376
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 4/220 (1%)
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+P +Y I CR D R L M G +P T+ ++ + +Q+ A
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHD 185
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
++ KM D Y++LI +AGR+ +A E+F +M + P++ T+ ++ C
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLC 241
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E L +LQKM+E +P YA L+ + CR+++ + +L MF + +
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
T +V G++ A FE M KG P TY +
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAI 341
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 72/165 (43%), Gaps = 4/165 (2%)
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
P + Y++LI L + ++ A M + G P+ T+N++I C + E A L
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
KM D +YA L++ C R+ +F+ D T+A+LV+GL +
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEA----LELFREMTQPDMYTHAALVKGLCD 242
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
+G+ E ++M G P Y L + +++ E+I
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKI 287
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/270 (19%), Positives = 100/270 (37%), Gaps = 21/270 (7%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T +T +R GR D+A MKK D A + L+D + A +
Sbjct: 545 VVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILK 604
Query: 257 EFKDCIPLSSQIFNILIHG-------------------WCKTRKVDDAQKAMKEMFQQGF 297
+ + F I W KT ++ D + + M +
Sbjct: 605 HMTGVASMPNH-FTFFILLRHLLQRRLAEHVPLKATSVW-KTIELADVFELFELMKKNSV 662
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
+Y +E + E+ +V + M+E+ + Y +++ K + ++A
Sbjct: 663 PSSARTYLSILEGFSEERRLDEVTSLVSLMKEENLPLNEDIYNALVNCFCKLRMYSDAWA 722
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ M LP+ FY L+ L+ G+ A EIF + + + + + +I
Sbjct: 723 LLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAKEIFRSSRWKEYNTDEIVWKVIIDGFI 782
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+ + ++ +E+ CKP ETYA L
Sbjct: 783 RKGHADMCHDMISMLEQMKCKPSDETYAML 812
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/363 (26%), Positives = 174/363 (47%), Gaps = 4/363 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y ++D L K ++ EM + G + + S++M L R GR +A+E F+
Sbjct: 149 YGMIIDSLCKDGMTTEALDMFSEM--IGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKE 206
Query: 223 MKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRK 281
M+ G+ D + L+ L + G E + + L + F ILI G CK K
Sbjct: 207 MEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGK 266
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V +AQ+ ++ M +G PD+++Y + C + + ++G K +V +Y I
Sbjct: 267 VGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 326
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+++ K ++I+EA +++E+M+ P T Y++LI L ++GRV+ A ++F +M+ G
Sbjct: 327 LINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 386
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ TY ++ C E A+ L Q +++ KP+ E ++ LL CR +++
Sbjct: 387 QFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 446
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ KN + D Y L+ GL G L A +M KG +P T+ ++ + L
Sbjct: 447 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 506
Query: 522 EKK 524
K+
Sbjct: 507 LKE 509
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/324 (26%), Positives = 161/324 (49%), Gaps = 8/324 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDEL--NNGYVSLA-TMSTIMRRLVRGGRYDDAVEAF 220
YN+++ L ++ +W+ V L + G+ A T + ++ L + G+ +A +
Sbjct: 219 YNSLIHGLSRAG----LWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQIL 274
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKT 279
M G E D + LM+ L +E A K+F D I L+ +NILI+G+CK
Sbjct: 275 ELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKD 334
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+K+D+A + +EM +G P V+Y I C+ R EMQ G + TY
Sbjct: 335 QKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTY 394
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+++ L K + EA+ +++ +K + P+ +S L+ + +AG++++A + F+++ K
Sbjct: 395 CVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISK 454
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G+ P+ + YN +I+ C + A+KLL +MEE C PD T+ +++ ++ +
Sbjct: 455 NGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHE 514
Query: 460 LNFLLTHMFKNDVSMDAGTYASLV 483
LL M + S D + L+
Sbjct: 515 AIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 170/365 (46%), Gaps = 4/365 (1%)
Query: 155 TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYD 214
G + +Y++++D L + + E KEM E + T ++++ L R G +
Sbjct: 175 AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEM-EGRGISADVYTYNSLIHGLSRAGLWK 233
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNIL 272
+ M G D ++L+D L K V A ++ + K P +N L
Sbjct: 234 EVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEP-DILTYNTL 292
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
++G C +++DA K + + +G +V SY I YC+++ + +EM+ KG
Sbjct: 293 MNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGL 352
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
KPS +TY ++ AL ++ ++ A K++ +M++ S Y L+ L K G +++A +
Sbjct: 353 KPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAID 412
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+F+ +KK PN+ ++ ++ C + E A K ++ ++ +PD Y L+ C
Sbjct: 413 LFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLC 472
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
K + LL M + D+ T+ +++ L++ ++ A EEM ++ P +
Sbjct: 473 NKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEA 532
Query: 513 TYKML 517
ML
Sbjct: 533 VTSML 537
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 139/298 (46%), Gaps = 10/298 (3%)
Query: 225 KYGVEKDTRALSVLMDTLVKG----NSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKT 279
K G E D +V + TLVKG N + A ++F E + + ++ + ILI+G CK
Sbjct: 70 KRGFEPD----AVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKA 125
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
RK A K + E + DV +Y I+ C++ + D EM G P V+ Y
Sbjct: 126 RKTGLAIK-LHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVY 184
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+ +M L + ++ EAL+ +++M+ D Y+SLI LS+AG K+ M
Sbjct: 185 SSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVD 244
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G P+ T+ +I C + A ++L+ M +PD TY L+ C +++
Sbjct: 245 RGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLED 304
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + + ++ +Y L+ G + K++ A FEEM KG+ P TY L
Sbjct: 305 ATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTL 362
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 112/221 (50%), Gaps = 4/221 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +++ K +K + L +EM S T +T++ L + GR A + F M
Sbjct: 324 YNILINGYCKDQKIDEAFRLFEEMRP-KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEM 382
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWCKTRK 281
+ G VL+D L K +E A +F K + P + ++F+IL+ G C+ K
Sbjct: 383 QTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKP-NIEVFSILLDGMCRAGK 441
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+++A K E+ + G PD ++Y I C + + L +M+EKGC P IT+ +
Sbjct: 442 LEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNV 501
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
++ L K +I+EA+++ E+M++ + PD + S L+ + S
Sbjct: 502 IIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLLCLAS 542
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/247 (25%), Positives = 98/247 (39%), Gaps = 36/247 (14%)
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQI 352
++GF PD V+ T ++ E EM EKG TY I+++ L KA++
Sbjct: 69 LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128
Query: 353 NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
A+K++EKMK + C D V TY +
Sbjct: 129 GLAIKLHEKMKGN-CKGD-----------------------------------VFTYGMI 152
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
I S C AL + +M PD Y+ L+ CR R+K M +
Sbjct: 153 IDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGI 212
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKER 532
S D TY SL+ GL +G + F M+ +G P T+ +L + L K+ ++
Sbjct: 213 SADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQ 272
Query: 533 INKLLAH 539
I +L+ H
Sbjct: 273 ILELMHH 279
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 167/339 (49%), Gaps = 1/339 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T+ +++ +G R+ +AV M +G + + +++ L K + +A +VF
Sbjct: 148 SIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVF 207
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
K I + +N LI G + + DA + +++M ++ P+V+ +T I+ + +E
Sbjct: 208 YCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKE 267
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + + KEM + P+V TY +++ + +A +++ M S C PD Y
Sbjct: 268 GNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTY 327
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI K+ RV+D ++F +M QG+V + TYNT+I C + A K+ +M +
Sbjct: 328 NTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVD 387
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD TY LL C +++ ++ + K+++ +D TY +++GL + KL+
Sbjct: 388 CGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKE 447
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
A F + KG+ P Y + L +K L +++
Sbjct: 448 AWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKL 486
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 154/331 (46%), Gaps = 9/331 (2%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + ++ + + ++D + + M+ G+ D + ++L+ + + + A +
Sbjct: 78 SIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALL 137
Query: 256 -----LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
L F+ I + N G+C+ + +A + M GF P+VV Y I
Sbjct: 138 GKMMKLGFRPSIVTLGSLLN----GFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVING 193
Query: 311 YCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPD 370
C+ +D + M++KG + +TY ++ L + + +A ++ M P+
Sbjct: 194 LCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPN 253
Query: 371 TSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
F+++LI K G + +A ++++M ++ VVPNV TYN++I+ C +A +
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFD 313
Query: 431 KMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESG 490
M C PD TY L+ C+ KR++ L M + DA TY +L+ G ++G
Sbjct: 314 LMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAG 373
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
KL +A F M+ G+ P TY +L + L
Sbjct: 374 KLNVAQKVFNRMVDCGVSPDIVTYNILLDCL 404
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 148/304 (48%), Gaps = 10/304 (3%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G++ +YNT+++ L K++ E+ M++ T +T++ L GR+ D
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEK-KGIRADAVTYNTLISGLSNSGRWTD 237
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILI 273
A R M K ++ + + L+DT VK ++ A ++ E + +P + +N LI
Sbjct: 238 AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVP-NVFTYNSLI 296
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK---EMQEK 330
+G+C + DA+ M +G PDVV+Y I +C+ K +V+D +K EM +
Sbjct: 297 NGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSK---RVEDGMKLFCEMTYQ 353
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
G TY ++H +A ++N A KV+ +M PD Y+ L+ L G+++ A
Sbjct: 354 GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKA 413
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ ED++K + +++TYN +I C + + A L + + KPD Y ++
Sbjct: 414 LVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISG 473
Query: 451 CCRK 454
CRK
Sbjct: 474 LCRK 477
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 106/237 (44%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA EM Q P +V +T + + F V +M+ G + ++T
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I++H + +++ AL + KM P SL+ + R ++A + + M
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G VPNV+ YNT+I+ C + NAL++ ME+ + D TY L+ R
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M K + + + +L+ ++ G L A + ++EMI + +VP TY L
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 295
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
DA +F +M + +P+++ + +++ ++ + + L KME D ++ L+
Sbjct: 62 DAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILI 121
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
CR R+ + LL M K T SL+ G + + + A S + M G V
Sbjct: 122 HCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFV 181
Query: 509 PYHSTYKMLEEKLEKKR-LGNAKE 531
P Y + L K R L NA E
Sbjct: 182 PNVVIYNTVINGLCKNRDLNNALE 205
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 155/319 (48%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCI 262
++ R R G+Y++++ M G D + L+ ++ A +V +
Sbjct: 75 LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+N LI G+ K ++++A + + M +GF PDVV+Y I +C +
Sbjct: 135 KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALE 194
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+E+ + C+P+VITYTI++ A I+ A+K+ ++M S PDT Y+++I +
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K V A E+ + +G P+++TYN ++ + +R + KL+ +M CKP+
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVV 314
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
T++ L+ CR +++ LL M + + DA Y L+ G G+L+LA F E M
Sbjct: 315 THSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYM 374
Query: 503 ISKGIVPYHSTYKMLEEKL 521
IS G +P Y + L
Sbjct: 375 ISDGCLPDIVNYNTIMAGL 393
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/422 (25%), Positives = 194/422 (45%), Gaps = 10/422 (2%)
Query: 105 SKQYQSPDKVVEALKGCG---VSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTP 161
S+ +V+E L+ G V N+L+ ++ +N L A K++ G++
Sbjct: 117 SRNIGKATRVMEILERYGKPDVFAYNALISGFIK--ANQLENANRVLDRMKSR-GFLPDV 173
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YN M+ K L E+ +E+ + +N ++ T + ++ + G D A++
Sbjct: 174 VTYNIMIGSFCSRGKLDLALEIFEELLK-DNCEPTVITYTILIEATILDGGIDVAMKLLD 232
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKT 279
M G+E DT + ++ + K V+ A+++ L + C P +NIL+
Sbjct: 233 EMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKP-DIITYNILLRTLLSR 291
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
K + +K + EM G P+VV+++ I CR+ + + L+ M+EKG KP Y
Sbjct: 292 GKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCY 351
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++ + +++ A + E M SD CLPD Y++++ L + G+ A E+FE + +
Sbjct: 352 DPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDE 411
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G PNV +YNT+ S+ + + AL+++ K+ PD TY L+ CR +
Sbjct: 412 VGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDE 471
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
LL M + +Y ++ GL + + A M KG P +TY +L E
Sbjct: 472 AIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIE 531
Query: 520 KL 521
+
Sbjct: 532 GI 533
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 81/178 (45%), Gaps = 1/178 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ +TIM L R G+ D A+E F + + G + + + L L A ++ L
Sbjct: 383 IVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMIL 442
Query: 257 EF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+ I +N LI C+ VD+A + + +M + P+VVSY + C+
Sbjct: 443 KLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVN 502
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ L M EKGC+P+ TY +++ +G + EA+++ + + + + SF
Sbjct: 503 RANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSLHGMNAISEDSF 560
>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
lyrata]
Length = 977
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/418 (26%), Positives = 185/418 (44%), Gaps = 20/418 (4%)
Query: 118 LKGCGVSVSNSLVEQTLRR-FSNDLTPAFGFFTWAKTQTGYMH--------------TP- 161
LKG +N LV + + FS D + +F ++ G M TP
Sbjct: 326 LKGRNADAANGLVHEMVSHGFSID-PMMYDYFICVMSKEGAMEKAKALFDGMITFGVTPG 384
Query: 162 -EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
Y ++++ + K +EL+ E+ + N +S T T ++ + G D A
Sbjct: 385 ARAYASLIEGFFREKNVRKGYELLVEIKK-RNIVISPYTYGTAVKGMCSSGDLDGAYNIV 443
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKT 279
+ M G + + L+ T ++ + A +V E ++ I + +N LI G K
Sbjct: 444 KEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKA 503
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+K+D+A+ + EM + GF PD +Y FI Y +F D +KEM E G P+ +
Sbjct: 504 KKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLC 563
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T +++ K ++ EA + M L D Y+ L+ L K G+V DA EIF +M+
Sbjct: 564 TGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRG 623
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+ P+V +Y T+I + A + +M + + Y LL CR ++
Sbjct: 624 KGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEK 683
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M +A TY +++ G +SG L A F+EM KG+VP Y L
Sbjct: 684 AKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTL 741
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 167/367 (45%), Gaps = 13/367 (3%)
Query: 146 GFFTWAKTQTGY-----------MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY 194
GFF + GY + +P Y T V + S + +VKEM +
Sbjct: 394 GFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGA-SGCR 452
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
++ +T+++ ++ R+ DAV + M++ G+ DT + L+ L K ++ A
Sbjct: 453 PNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSF 512
Query: 255 FLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
LE ++ + + I G+ + + A K +KEM + G P+ V T I YC+
Sbjct: 513 LLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCK 572
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + + M E+G TYT++M+ L K ++N+A +++ +M+ PD
Sbjct: 573 KGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFS 632
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y +LI SK G ++ A+ IF++M + G+ NV+ YN ++ C E E A +LL +M
Sbjct: 633 YGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMS 692
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
P+ TY ++ C+ + L M + D+ Y +LV G +E
Sbjct: 693 GKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVE 752
Query: 494 LACSFFE 500
A + FE
Sbjct: 753 RAITIFE 759
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 94/376 (25%), Positives = 173/376 (46%), Gaps = 9/376 (2%)
Query: 148 FTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST-IMRR 206
F + G+ Y + ++ +F + VKEM L G + + T ++
Sbjct: 512 FLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM--LECGVIPNKVLCTGLINE 569
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLS 265
+ G+ +A AFR M + G+ D + +VLM+ LVK V A ++F E + I
Sbjct: 570 YCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPD 629
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+ LI G+ K + A EM Q G + +V+ Y + +CR + K + L
Sbjct: 630 VFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLD 689
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
EM KG P+ +TY ++ K+ + EA +++++MK +PD+ Y++L+ +
Sbjct: 690 EMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLN 749
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED----LCKPDC 441
V+ A IFE +K G + +N +I+ + E ++ ++ + KP+
Sbjct: 750 DVERAITIFETNEK-GCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPND 808
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY ++ C++ ++ L HM K ++ TY SL+ G + G+ S F+E
Sbjct: 809 VTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDE 868
Query: 502 MISKGIVPYHSTYKML 517
+I+ GI P + Y ++
Sbjct: 869 VIAAGIEPDNIMYSVI 884
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 173/379 (45%), Gaps = 8/379 (2%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G + + + YN ++D L K K+ L+ EM+ + + S ++ L++G D
Sbjct: 275 GLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGL-FADNVAYSILIDGLLKGRNADA 333
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNIL 272
A M +G D + + K ++E A +F + F + ++ + L
Sbjct: 334 ANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFG--VTPGARAYASL 391
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I G+ + + V + + E+ ++ +Y ++ C D + +KEM GC
Sbjct: 392 IEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGC 451
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+P+V+ YT ++ + + +A++V ++M+ PDT Y+SLI LSKA ++ +A
Sbjct: 452 RPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARS 511
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+M + G P+ TY IS E +A K +++M E P+ L+ C
Sbjct: 512 FLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYC 571
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
+K ++ M + + DA TY L+ GL+++GK+ A F EM KGI P
Sbjct: 572 KKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVF 631
Query: 513 TYKMLEEKLEKKRLGNAKE 531
+Y L + K LGN ++
Sbjct: 632 SYGTLIDGFSK--LGNMQK 648
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 148/320 (46%), Gaps = 16/320 (5%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + +M LV+ G+ +DA E F M+ G+ D + L+D K +++ A +F E
Sbjct: 597 TYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEM 656
Query: 259 KDCIPLSSQ--IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
L+S I+N+L+ G+C++ +++ A++ + EM +GF P+ V+Y I+ YC+ D
Sbjct: 657 VQA-GLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGD 715
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+ EM+ KG P YT ++ + + A+ ++E C ++ +++
Sbjct: 716 LAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFET-NEKGCASSSAPFNA 774
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGV----VPNVLTYNTMISSACARSEEENALKLLQKM 432
LI + K G+ + ++ + PN +TYN MI C E A +L M
Sbjct: 775 LINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHM 834
Query: 433 EEDLCKPDCETYAPLL----KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
++ P TY LL KM R + V + ++ + D M Y+ ++ ++
Sbjct: 835 QKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIM----YSVIINAFLK 890
Query: 489 SGKLELACSFFEEMISKGIV 508
G A ++M +K V
Sbjct: 891 EGMTTKALVLLDQMFAKNAV 910
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 142/323 (43%), Gaps = 1/323 (0%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFN 270
R +DA M G+ D A S+L+D L+KG + + A + E + +++
Sbjct: 295 RLEDAKSLLVEMNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYD 354
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
I K ++ A+ M G +P +Y IE + REK+ RK + L E++++
Sbjct: 355 YFICVMSKEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKR 414
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
S TY + + + ++ A + ++M + C P+ Y++LI + R DA
Sbjct: 415 NIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDA 474
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+ ++M++QG+ P+ YN++I + + A L +M E+ KPD TY +
Sbjct: 475 VRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISG 534
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
+ + M + V + L+ + GK+ ACS F M+ +GI+
Sbjct: 535 YIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGD 594
Query: 511 HSTYKMLEEKLEKKRLGNAKERI 533
TY +L L K N E I
Sbjct: 595 AKTYTVLMNGLVKNGKVNDAEEI 617
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 166/366 (45%), Gaps = 25/366 (6%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
SLA + ++ L++ R D + ++GM + V D ++ +L+ + +V+ A V
Sbjct: 188 SLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVL 247
Query: 256 LEF-----------------------KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
L+ K +P S Q +N+LI G CK ++++DA+ + EM
Sbjct: 248 LKTEEELGTATLNVDEALELKKSMSCKGLVP-SRQSYNLLIDGLCKQKRLEDAKSLLVEM 306
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQI 352
G D V+Y+ I+ + ++ + + EM G + Y + + K +
Sbjct: 307 NSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAM 366
Query: 353 NEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
+A +++ M + P Y+SLI + V+ E+ ++KK+ +V + TY T
Sbjct: 367 EKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTA 426
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
+ C+ + + A ++++M C+P+ Y L+K +K R +L M + +
Sbjct: 427 VKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGI 486
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY-KMLEEKLEKKRLGNAKE 531
+ D Y SL+ GL ++ K++ A SF EM+ G P TY + +E +A +
Sbjct: 487 APDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADK 546
Query: 532 RINKLL 537
+ ++L
Sbjct: 547 YVKEML 552
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 147/354 (41%), Gaps = 29/354 (8%)
Query: 221 RGMKKYGVEKDTRAL--SVLMDTLVKGNSVEHAYKVFLEFKDC----IPLSSQIFNILIH 274
R ++++ + D R L +L+D ++ ++ A VF KD +P ++ N L+
Sbjct: 139 RCLREFVGKSDDRVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARC-NHLLD 197
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---------- 324
K ++D K M ++ DV SY I +CR+ + + D L
Sbjct: 198 ALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLKTEEELGTA 257
Query: 325 -----------KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
K M KG PS +Y +++ L K K++ +A + +M S D
Sbjct: 258 TLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVA 317
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
YS LI L K AN + +M G + + Y+ I E A L M
Sbjct: 318 YSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMI 377
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
P YA L++ R+K ++ LL + K ++ + TY + V+G+ SG L+
Sbjct: 378 TFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLD 437
Query: 494 LACSFFEEMISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
A + +EM + G P Y +++ L+K R G+A + ++ TF
Sbjct: 438 GAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTF 491
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 130/310 (41%), Gaps = 12/310 (3%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA-TMSTIMRRLVRGG 211
Q G +YN ++ +S + EL+ EM G+ A T TI+ + G
Sbjct: 657 VQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMS--GKGFPPNAVTYCTIIDGYCKSG 714
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI 271
+A + F MK G+ D+ + L+D + N VE A +F + SS FN
Sbjct: 715 DLAEAFQLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNA 774
Query: 272 LIHGWCKTRKV----DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
LI+ K K D + M F + P+ V+Y I++ C+E + + M
Sbjct: 775 LINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHM 834
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
Q+ P+VITYT +++ K + +E V++++ + PD YS +I K G
Sbjct: 835 QKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMT 894
Query: 388 KDANEIFEDMKKQGVVPN-----VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
A + + M + V + + T ++S E E A K+++ M PD
Sbjct: 895 TKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSS 954
Query: 443 TYAPLLKMCC 452
T L+ C
Sbjct: 955 TVIELINESC 964
>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
Length = 793
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 178/377 (47%), Gaps = 3/377 (0%)
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
+V LG+ + ++ +L+ EM + + +T++ L R GRY+ A++ F +++
Sbjct: 150 VVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQ 209
Query: 227 GVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDD 284
GV +V++D + G S + E + + + +I + +D
Sbjct: 210 GVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQ 269
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A +++ +G P VV+Y ++ + + ++ + LKEM++ GC+P +TY +
Sbjct: 270 AVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAG 329
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
+A EA K + M S LP+T Y++++ + GRV +A +F+ MKK G VP
Sbjct: 330 TYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVP 389
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
NV TYN + +S L++L++M C P+ T+ +L +C ++ + +L
Sbjct: 390 NVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVL 449
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M V + TY +L+ G A ++EMIS G P +TY L L ++
Sbjct: 450 NGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQ 509
Query: 525 R-LGNAKERINKLLAHA 540
A+ ++K+L +
Sbjct: 510 GDWSTAQSIVSKMLKNG 526
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 187/391 (47%), Gaps = 15/391 (3%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ GY+ YN + +LGK +F M E+++EM + + T +T++ + G
Sbjct: 384 KNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSR-SGCTPNRVTWNTMLAVCGKRGME 442
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-----FKDCIPLSSQI 268
D GMK GVE + L+ + S +A+K++ E F C+ + +
Sbjct: 443 DYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNAL 502
Query: 269 FNILIHGWCKTRKVD--DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
N+L +R+ D AQ + +M + GF P+ SY+ ++ Y + + ++ KE
Sbjct: 503 LNVL------SRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKE 556
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
+ PS + ++ A K +++ K ++++K+ PD ++S++ + +K G
Sbjct: 557 VYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGL 616
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
A E+F+ +K+ G+ P+++TYN+++ +E A K+L++++ KPD +Y
Sbjct: 617 YSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNT 676
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++ C++ +K +L+ M + ++ TY +LV G A MI
Sbjct: 677 VINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHN 736
Query: 507 IVPYHSTY-KMLEEKLEKKRLGNAKERINKL 536
+ P TY ++++ + KR A+E ++++
Sbjct: 737 LKPMELTYRRVVDSYCKAKRYDEAREFLSEI 767
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 147/316 (46%), Gaps = 4/316 (1%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAF 220
+ YNT++ G+ +++ EM +++G+ L T + ++ L R G + A
Sbjct: 462 DTYNTLISAYGRCGSRTYAFKMYDEM--ISSGFTPCLTTYNALLNVLSRQGDWSTAQSIV 519
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKT 279
M K G + + ++ S+L+ KG + + E + I S I L+ K
Sbjct: 520 SKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKC 579
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
R+++ +KA +E+ QG+ PD+V + + Y + + K + +++ G P +ITY
Sbjct: 580 RRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITY 639
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+M K+ + EA K+ +++KS PD Y+++I K G +K+A I +M
Sbjct: 640 NSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIA 699
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G+ P V+TY+T++ + A +++ M KP TY ++ C+ KR
Sbjct: 700 DGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDE 759
Query: 460 LNFLLTHMFKNDVSMD 475
L+ + D + D
Sbjct: 760 AREFLSEISDTDQNFD 775
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/358 (27%), Positives = 173/358 (48%), Gaps = 6/358 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++D K++ ++EM+EL + A S+I++ + G A++ F M
Sbjct: 101 YNIIIDGYCKARNIEKALAFLREMEELGHPPTPHA-YSSIVQSFCKTGNVSKAMDVFAEM 159
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G E D +VL+ L + + A ++F + + C P +N +I G CK +K
Sbjct: 160 PAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKP-DVVTYNTMIAGLCKWKK 218
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT- 340
+D+A ++ M Q+ SP V+YT I+H C+ ++ + ++M E C + Y+
Sbjct: 219 LDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSV 278
Query: 341 -IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
I+++ L KA++ EA +++++M+ P Y++L+ L +++DA E+ M
Sbjct: 279 LILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLD 338
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
Q PN+ TY +ISS C + E A KLL M + P + + LL R R+
Sbjct: 339 QVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDD 398
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L M + + G+ L+ G++ G ++ A F ++M GIVP TY L
Sbjct: 399 AFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKL 456
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 156/324 (48%), Gaps = 4/324 (1%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDC 261
++R + G + M + G+ + + L+ L K + A + C
Sbjct: 35 LIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQHC 94
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
P + +NI+I G+CK R ++ A ++EM + G P +Y+ ++ +C+ + K
Sbjct: 95 AP-NVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAM 153
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D EM KGC+P ++ + +++ L +A++I+EA +++ M S C PD Y+++I L
Sbjct: 154 DVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGL 213
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K ++ +A + E MK++ V P +TY T+I C + + A ++ +KM E C
Sbjct: 214 CKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTE 273
Query: 442 ETYAPLLKM--CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
Y+ L+ + C+ +R + M +S TY +L+ GL+ + KL+ A
Sbjct: 274 PAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELT 333
Query: 500 EEMISKGIVPYHSTYKMLEEKLEK 523
M+ + P TY++L L K
Sbjct: 334 YFMLDQVPAPNMFTYEILISSLCK 357
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 130/293 (44%), Gaps = 39/293 (13%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG---------- 331
V A+ ++EM GFSPDV S+ I + + F++ L M E G
Sbjct: 10 VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69
Query: 332 ------------------------CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
C P+V++Y I++ KA+ I +AL +M+
Sbjct: 70 LISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGH 129
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P YSS++ K G V A ++F +M +G P+++ +N ++S + A +
Sbjct: 130 PPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARE 189
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L + M CKPD TY ++ C+ K++ FLL M + DVS TY +L+ L
Sbjct: 190 LFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLC 249
Query: 488 ESGKLELACSFFEEMISKGIV----PYHSTYKMLEEKLEKKRLGNAKERINKL 536
+ +L+ A FE+M ++G P +S ++ + +R G AKE ++
Sbjct: 250 KFARLQQAYEVFEKM-AEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEM 301
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 143/310 (46%), Gaps = 39/310 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ L +++K EL + M+ + T +T++ L + + D+AV M
Sbjct: 171 FNVLLSGLWRARKIHEARELFRSMNS-RGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERM 229
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFN--ILIHGWCKTR 280
K+ V + L+D L K ++ AY+VF + + P + ++ ILI+G CK R
Sbjct: 230 KQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKAR 289
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+ +A++ +EM +G SP VV+Y +E + + M ++ P++ TY
Sbjct: 290 RPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYE 349
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK- 399
I++ +L K Q+ EA K+ M+ +P + L+ L++AGR+ DA E++++M +
Sbjct: 350 ILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRI 409
Query: 400 ----------------------------------QGVVPNVLTYNTMISSACARSEEENA 425
G+VP+ TY+ ++ C + + + A
Sbjct: 410 NCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQA 469
Query: 426 LKLLQKMEED 435
KL++++ D
Sbjct: 470 RKLVEELVRD 479
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 80/183 (43%), Gaps = 1/183 (0%)
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L +A + +A + E+MK PD + LI K+G + + M + G+
Sbjct: 1 IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PN + YN +IS C A L++M + C P+ +Y ++ C+ + ++
Sbjct: 61 FPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALA 119
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
L M + Y+S+V+ ++G + A F EM +KG P + +L L
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179
Query: 523 KKR 525
+ R
Sbjct: 180 RAR 182
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 108/404 (26%), Positives = 184/404 (45%), Gaps = 15/404 (3%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
D ++ +L Q+ + +E V + +LV++ L+ N A FF
Sbjct: 39 DATIVNLVLKTDSQTLTRTLEKYP---VEWTPNLVDRVLKLLWNHGPKALQFFKSLDYHP 95
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
Y H ++ +D+ G+ + + +W LV M G + T + I R V G+ D
Sbjct: 96 TYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLG-PNPKTFAIITERYVSAGKPDR 154
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA-YKVFLEFKDCIPLSSQIFNILIH 274
A++ F M ++G +D + + ++D L K VE A K+F F+ F IL+
Sbjct: 155 AIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVFRGR-------FRILLK 207
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+ + ++ +A + +M ++ DVV+YT + + + RK EM +G P
Sbjct: 208 GFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLP 267
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
SV TY + L K + A+ V+E+M +P+++ Y+ +I L GR++ A E
Sbjct: 268 SVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFM 327
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK-MCCR 453
MK PNV YN +I C E E L + +KM + C P+ +TY L+ M R
Sbjct: 328 ARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFVR 387
Query: 454 KKRMKVLNF--LLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
KK +L LL M + T+ ++ GL+ +G + A
Sbjct: 388 KKSDYLLTAGKLLIEMVERGFLPRKFTFNRVLDGLLLTGNQDFA 431
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 115/253 (45%), Gaps = 7/253 (2%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ + F I+ + K D A K M + G D+ S+ ++ C+ K D+ L
Sbjct: 135 NPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKL 194
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
++ + I++ +A Q+ EA + + +MK C D Y++++ A
Sbjct: 195 FKVFRG-------RFRILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVA 247
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G V+ A +F +M +GV+P+V TYN I C + ENA+ + ++M P+ TY
Sbjct: 248 GEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTY 307
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
+++ C RM+ + M ++ + Y ++R ++ ++E + FE+M
Sbjct: 308 NVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGD 367
Query: 505 KGIVPYHSTYKML 517
+P TY +L
Sbjct: 368 ADCLPNLDTYNIL 380
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 32/204 (15%)
Query: 353 NEALKVYEKMKSDDCLPDTSFYSS-LIFILSKAGRVKDANEIF---EDMKKQGVVPNVLT 408
N K + KS D P + SS + AGR++D ++ + M+ + + PN T
Sbjct: 79 NHGPKALQFFKSLDYHPTYAHVSSSFDHAIDIAGRLRDYKTLWTLVDRMRTRRLGPNPKT 138
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV--------- 459
+ + + + + A+K+ M E C D ++ +L + C+ KR+++
Sbjct: 139 FAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFNTILDVLCKSKRVEMADNKLFKVF 198
Query: 460 ---LNFLLTHMF----------------KNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
LL F K +D TY ++V G +G++ A F
Sbjct: 199 RGRFRILLKGFFRAGQLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFN 258
Query: 501 EMISKGIVPYHSTYKMLEEKLEKK 524
EMI +G++P +TY + L KK
Sbjct: 259 EMIGEGVLPSVATYNAFIQVLCKK 282
>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
Length = 563
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 154/322 (47%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
I+ VR + A+ F M G+ + + L+ L+K N E A++VF E K
Sbjct: 100 AIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFNETKGN 159
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ L F I+I G C+ +D + + +M + G SP+VV YT I+ C+ D +
Sbjct: 160 VKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGK 219
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+M E + TYT++++ K + +++YEKMK +P+ Y+S+I
Sbjct: 220 QLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRC 279
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
G++ +A E+F++M+++GV NV+TYNT+I C A +L+ +M+ D P+
Sbjct: 280 CNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNL 339
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
+Y L+ C + + L M + S TY L+ G E+ E
Sbjct: 340 ISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVRE 399
Query: 502 MISKGIVPYHSTYKMLEEKLEK 523
M ++G+ P TY +L + L +
Sbjct: 400 MEARGLSPSKVTYTILMDALVR 421
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 137/272 (50%), Gaps = 1/272 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++++ R G+ ++A E F M++ GV + + L+ L + V A ++
Sbjct: 271 TYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRM 330
Query: 259 K-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K D + + +N LI G+C +D A +M G SP + +Y I + K+
Sbjct: 331 KRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNS 390
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
V D ++EM+ +G PS +TYTI+M AL ++ I +A ++Y M+ + D Y L
Sbjct: 391 AGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVL 450
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L G +K+A+++F+ + + + PN + YNTMI C AL+LL++M E+
Sbjct: 451 IHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGM 510
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
P+ +Y +++ C+ ++ LL M +
Sbjct: 511 VPNVASYNSTIQILCKDEKWTEAEVLLKDMIE 542
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/363 (21%), Positives = 156/363 (42%), Gaps = 3/363 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G + +N ++ +L KS F W + E N + + + +++ G D
Sbjct: 125 GLVPGSNTFNNLLILLIKSNFFEKAWRVFNETK--GNVKLDVYSFGIMIKGCCEVGYLDK 182
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQ-IFNILIH 274
E M++ G+ + + L+D K +E ++F + + +++Q + +LI+
Sbjct: 183 GFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLIN 242
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+ K D + ++M G P+V +Y I C + + EM+E+G
Sbjct: 243 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVAC 302
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V+TY ++ L + +++ EA ++ +MK D P+ Y++LI G + A+ +F
Sbjct: 303 NVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLF 362
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
MK G P++ TYN +I+ ++++ME P TY L+ R
Sbjct: 363 NQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRS 422
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ + + M K + D Y L+ GL G ++ A F+ + + P Y
Sbjct: 423 DNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIY 482
Query: 515 KML 517
+
Sbjct: 483 NTM 485
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 3/208 (1%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
+L A F K+ +G + YN ++ ++K + ++V+EM E S
Sbjct: 353 GNLDKASSLFNQMKS-SGQSPSLATYNILIAGFSEAKNSAGVTDMVREM-EARGLSPSKV 410
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + +M LVR + A + + M+K G+ D VL+ L ++ A K+F
Sbjct: 411 TYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL 470
Query: 259 KDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ + + I+N +I+G+CK A + +KEM + G P+V SY I+ C+++ +
Sbjct: 471 DEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKW 530
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ + LK+M E G KPS+ + ++ A
Sbjct: 531 TEAEVLLKDMIELGLKPSISIWNMISKA 558
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/325 (21%), Positives = 128/325 (39%), Gaps = 27/325 (8%)
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
A+ F G + +++S ++ L+ N H+ + L+ +S QI
Sbjct: 22 ALSLFTSSALQGFQHTHQSISFILHLLISSNLFSHSQSLLLKL-----ISGQI------- 69
Query: 276 WCKTRKVDDAQKAMKEMFQ---QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+ E+ Q F V+ + I + R + + +M +G
Sbjct: 70 ---SSSSFTPSSLFHELTQPHLDSFPTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGL 126
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P T+ ++ L K+ +A +V+ + K + L D + +I + G + E
Sbjct: 127 VPGSNTFNNLLILLIKSNFFEKAWRVFNETKGNVKL-DVYSFGIMIKGCCEVGYLDKGFE 185
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL---- 448
+ M++ G+ PNV+ Y T+I C + E +L KM E + TY L+
Sbjct: 186 VLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFF 245
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
KM +K ++ L M + + TY S++ GKL A F+EM +G+
Sbjct: 246 KMGLKKDGIE----LYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVA 301
Query: 509 PYHSTYKMLEEKLEKKRLGNAKERI 533
TY L L ++R ER+
Sbjct: 302 CNVVTYNTLIGGLCQERRVLEAERL 326
>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
[Oryza sativa Japonica Group]
gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 793
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 178/377 (47%), Gaps = 3/377 (0%)
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
+V LG+ + ++ +L+ EM + + +T++ L R GRY+ A++ F +++
Sbjct: 150 VVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQ 209
Query: 227 GVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDD 284
GV +V++D + G S + E + + + +I + +D
Sbjct: 210 GVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQ 269
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A +++ +G P VV+Y ++ + + ++ + LKEM++ GC+P +TY +
Sbjct: 270 AVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAG 329
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
+A EA K + M S LP+T Y++++ + GRV +A +F+ MKK G VP
Sbjct: 330 TYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVP 389
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
NV TYN + +S L++L++M C P+ T+ +L +C ++ + +L
Sbjct: 390 NVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVL 449
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M V + TY +L+ G A ++EMIS G P +TY L L ++
Sbjct: 450 NGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQ 509
Query: 525 R-LGNAKERINKLLAHA 540
A+ ++K+L +
Sbjct: 510 GDWSTAQSIVSKMLKNG 526
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 187/391 (47%), Gaps = 15/391 (3%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ GY+ YN + +LGK +F M E+++EM + + T +T++ + G
Sbjct: 384 KNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSR-SGCTPNRVTWNTMLAVCGKRGME 442
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-----FKDCIPLSSQI 268
D GMK GVE + L+ + S +A+K++ E F C+ + +
Sbjct: 443 DYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNAL 502
Query: 269 FNILIHGWCKTRKVD--DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
N+L +R+ D AQ + +M + GF P+ SY+ ++ Y + + ++ KE
Sbjct: 503 LNVL------SRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKE 556
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
+ PS + ++ A K +++ K ++++K+ PD ++S++ + +K G
Sbjct: 557 VYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGL 616
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
A E+F+ +K+ G+ P+++TYN+++ +E A K+L++++ KPD +Y
Sbjct: 617 YSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNT 676
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++ C++ +K +L+ M + ++ TY +LV G A MI
Sbjct: 677 VINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHN 736
Query: 507 IVPYHSTY-KMLEEKLEKKRLGNAKERINKL 536
+ P TY ++++ + KR A+E ++++
Sbjct: 737 LKPMELTYRRVVDSYCKAKRYDEAREFLSEI 767
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 147/316 (46%), Gaps = 4/316 (1%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAF 220
+ YNT++ G+ +++ EM +++G+ L T + ++ L R G + A
Sbjct: 462 DTYNTLISAYGRCGSRTYAFKMYDEM--ISSGFTPCLTTYNALLNVLSRQGDWSTAQSIV 519
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKT 279
M K G + + ++ S+L+ KG + + E + I S I L+ K
Sbjct: 520 SKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKC 579
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
R+++ +KA +E+ QG+ PD+V + + Y + + K + +++ G P +ITY
Sbjct: 580 RRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITY 639
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+M K+ + EA K+ +++KS PD Y+++I K G +K+A I +M
Sbjct: 640 NSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIA 699
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G+ P V+TY+T++ + A +++ M KP TY ++ C+ KR
Sbjct: 700 DGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDE 759
Query: 460 LNFLLTHMFKNDVSMD 475
L+ + D + D
Sbjct: 760 AREFLSEISDTDQNFD 775
>gi|359474755|ref|XP_002269803.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
gi|296085476|emb|CBI29208.3| unnamed protein product [Vitis vinifera]
Length = 464
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 199/438 (45%), Gaps = 13/438 (2%)
Query: 96 DVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQT 155
D + +I+S +P +V AL + + +V+ LR ++ + A FF WA
Sbjct: 16 DAKTLLQIISAT--APHALVAALSATSIPPTPDVVQDVLRLSYSNSSAAVEFFRWAGLTR 73
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
H+ +N +VD+LGK+ KF MW+ ++ M N G +SL+ ++ GR ++
Sbjct: 74 K--HSAHSWNLIVDLLGKNSKFEPMWDAIRSMR--NEGALSLSAFISVFGSYCSVGRVNE 129
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTL-VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIH 274
A+ +F M +YG+ D A++ L+ + +G S A + F + K I F IL+
Sbjct: 130 AIMSFEVMDRYGIPPDVAAMNALLSAICCEGGSTTLALEFFEKIKVKITPDGDTFMILLE 189
Query: 275 GWCKTRKVDDAQKAMKEMFQQ-GFSP-DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
GW + V A+ EM + G+SP ++V+Y + R + + L M+ KGC
Sbjct: 190 GWEREGNVTKAKSTFGEMVVRLGWSPQNMVAYNSVLMTLVRGMEVEEAIKFLLVMKGKGC 249
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P + ++ + L K A+ +++ M +P+ Y+++I IL AG +A
Sbjct: 250 LPGLKFFSNALDVLLKQNDSTHAIALWDIMLDGGFMPNLMMYNTIIGILCNAGDADNAFR 309
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
++M GV + TYN + + A K +M ++ C P A + MC
Sbjct: 310 FLDEMVFYGVFADSFTYNMIFQCLVKHKKVHEAGKFFIEMIKNECPPMPSNCAAAIAMCF 369
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
++ + ++M +N +S + +L+ GL + F E+M+ I + S
Sbjct: 370 DGDDPEMAIEIWSYMIENSLSPVDESANALLIGLCNLRRFSDYRRFAEDMLDMKIKIHES 429
Query: 513 TYKMLEEKLEKKRLGNAK 530
T EKL+ R + +
Sbjct: 430 TM----EKLKNARYKDGR 443
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 206/448 (45%), Gaps = 29/448 (6%)
Query: 100 ISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMH 159
IS +++K DK +++L ++ L + + SN++ FF W Q+ Y +
Sbjct: 45 ISNLINKPNWEHDKTLKSLAS---HMTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCY 101
Query: 160 T----PEMYNTMV--DVLGKSKKFCLMWELVKEMDELNNGYVSL---------------- 197
++ +V D+ G ++K ++ L++E ++ NG V L
Sbjct: 102 DLDGRIQLLGVLVSRDLFGVAQKAVVL--LIQECEDSENGVVKLMGALDGMTELGFRLSY 159
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
ST++ L + A +R M G +++ L K V+ A +
Sbjct: 160 PCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCK 219
Query: 258 -FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF-QQGFSPDVVSYTCFIEHYCREK 315
+ L + + L+ C+ + +A + ++M ++ P+ V+Y+ I C
Sbjct: 220 VLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAG 279
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ +EM EKGC+PS TYT+++ A ++A+K+ ++M + C+P+ Y+
Sbjct: 280 RLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYT 339
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
LI L + G++++AN +F M K G+ P ++T+N +I+ C +A +LL ME+
Sbjct: 340 ILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 399
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
CKP+ TY L++ CR + LL + N + D TY LV G + G+L +A
Sbjct: 400 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA 459
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ F M S G+ P T+ L + L K
Sbjct: 460 FNIFNSMNSAGLEPDGFTFTALIDGLCK 487
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 157/336 (46%), Gaps = 8/336 (2%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTR----ALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLS 265
R DD EAFR +K E++ R S+L+ L + +E A+++ E K C P S
Sbjct: 241 RRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP-S 299
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
++ + +LI C D A K + EM + P+V +YT I+ CRE + + +
Sbjct: 300 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFR 359
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
+M + G P +IT+ +++ K + A ++ M+ +C P+ Y+ L+ L +
Sbjct: 360 KMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVS 419
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ A + + G++P+ +TYN ++ C + A + M +PD T+
Sbjct: 420 KSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFT 479
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ C+ R++ N +L M K +S+D T+ +L+ G + GK + C FE M+
Sbjct: 480 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 539
Query: 506 GIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHA 540
+ T+ + L K +L A + K++ +
Sbjct: 540 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 575
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 186/384 (48%), Gaps = 11/384 (2%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGG 211
T+ G+ + Y+T++ L K + + + + M +N G+V T++ L + G
Sbjct: 151 TELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRM--VNEGFVLGGIDYRTVVNALCKNG 208
Query: 212 RYDDAVEAFR-GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQ 267
+ A E F + + G DT + L+ + + + A++VF + ++C P +S
Sbjct: 209 -FVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRP-NSV 266
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
++ILIHG C+ ++++A + +EM ++G P +YT I+ C K L EM
Sbjct: 267 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 326
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
K C P+V TYTI++ L + +I EA V+ KM P +++LI K G V
Sbjct: 327 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 386
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A ++ M+K PN+ TYN ++ C S+ A LL+++ ++ PD TY L
Sbjct: 387 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 446
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C++ ++ + + M + D T+ +L+ GL + G+LE A M+ KGI
Sbjct: 447 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 506
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKE 531
T+ L + ++G AK+
Sbjct: 507 SLDEVTFTALIDG--HCKIGKAKD 528
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 158/355 (44%), Gaps = 36/355 (10%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD----------------TL 242
T + ++ RL R G+ ++A FR M K+G+ + L++ +
Sbjct: 337 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 396
Query: 243 VKGNS----------------VEHAYKVFLEFKDCIP---LSSQI-FNILIHGWCKTRKV 282
KGN V +YK FL + + L ++ +NIL+ G+CK ++
Sbjct: 397 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 456
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ A M G PD ++T I+ C+ + + L M +KG +T+T +
Sbjct: 457 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 516
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ K + + ++E M + CL ++ + L K ++ +AN + M K G+
Sbjct: 517 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 576
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
VP+V+T+ +I C E +LK+L++M++ C P+ TY ++ C R++
Sbjct: 577 VPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAET 636
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+L M VS + TYA LV+ +++G+L+ A M+ G P Y L
Sbjct: 637 ILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSAL 691
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 148/324 (45%), Gaps = 3/324 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T S ++ L GR ++A + + M + G + TR +VL+ + A K+ E
Sbjct: 266 VTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDE 325
Query: 258 F--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
K C+P + + ILI C+ K+++A ++M + G P ++++ I YC+E
Sbjct: 326 MATKACVP-NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEG 384
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
L M++ CKP++ TY +M L + + +A + ++ + LPD Y+
Sbjct: 385 WVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYN 444
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
L+ K G++ A IF M G+ P+ T+ +I C E A +L M +
Sbjct: 445 ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 504
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
D T+ L+ C+ + K + FL +M +N A T+ + L + KL A
Sbjct: 505 GISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEA 564
Query: 496 CSFFEEMISKGIVPYHSTYKMLEE 519
+ +M+ G+VP T+ +L E
Sbjct: 565 NAMLGKMMKYGLVPSVVTHTILIE 588
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/375 (20%), Positives = 140/375 (37%), Gaps = 99/375 (26%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
YN +VD K + + + + M+ +G+ T + ++ L + GR + A
Sbjct: 443 YNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGF----TFTALIDGLCKLGRLEQANGIL 498
Query: 221 RGMKKYGVEKDTRALSVLMDTLVK-----------GNSVE-------HAYKVFLE----- 257
M K G+ D + L+D K N VE H + FL+
Sbjct: 499 GSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKD 558
Query: 258 -------------FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
K + S ILI G C+ + + K ++ M Q G SP+V +Y
Sbjct: 559 YKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTY 618
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
T I C + + L M G P+ TY +++ A KA +++ A ++ M
Sbjct: 619 TIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK 678
Query: 365 DDCLPDTSFYSSLI--FILS---------------------------------------- 382
+ C P++ YS+L+ F+LS
Sbjct: 679 NGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVP 738
Query: 383 -------------KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
K GR+ +A+++ +DM K G+ P+ +++I C + +N L+ +
Sbjct: 739 TEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFM 797
Query: 430 QKMEEDLCKPDCETY 444
+ + ++ P +Y
Sbjct: 798 KLVLDNKFVPSFASY 812
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL-- 256
T + +++ V+ GR D A + M K G + ++ S L+ V N+ A +
Sbjct: 652 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTG 711
Query: 257 -------------------EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
E K C + ++N L+ G CK ++ +A + ++M + G
Sbjct: 712 DLDARSLSSEENDNNCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGL 771
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
PD + + IEHYC+ + + +K + + PS +Y V+H L ++ EA K
Sbjct: 772 FPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQK 830
Query: 358 V 358
+
Sbjct: 831 L 831
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 196/470 (41%), Gaps = 71/470 (15%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVL-------------------------------- 171
A+ FF W++ Q Y H E Y ++VDVL
Sbjct: 135 AWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALI 194
Query: 172 ------GKSKKFCLMWELVKE---------MDELNNGYVS-------------------- 196
G ++ +W +KE + L NG VS
Sbjct: 195 KSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIK 254
Query: 197 --LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+ T +T+++ + G+ A+E R M+ G E D ++ + +
Sbjct: 255 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 314
Query: 255 FLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ E + I + F+++I G CK K+++ + M ++G P+V YT I+ Y +
Sbjct: 315 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 374
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
L M ++G KP V+TY++V++ L K ++ EAL + + D ++ F
Sbjct: 375 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 434
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM- 432
YSSLI L KAGRV +A +FE+M ++G + YN +I + + + A+ L ++M
Sbjct: 435 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 494
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
EE+ C TY LL ++ R + L M ++ A + +L GL SGK+
Sbjct: 495 EEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKV 554
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKE 542
AC +E+ G++ + M+ + R+ A + + + +E
Sbjct: 555 ARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGRE 604
>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
Length = 509
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 180/370 (48%), Gaps = 14/370 (3%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SL 197
N L A +F Q+G + Y +V L K+ K+ ++ +EM L+ G+ L
Sbjct: 136 NKLDLAASYFERM-VQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEM--LSKGHSPEL 192
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-- 255
T +T++ + GR D A+ R +K G S L+D L K + + A ++F
Sbjct: 193 VTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEM 252
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ +D I ++ I G CK K+D+A+ +M + G +PD VSY I C+
Sbjct: 253 AAGDVQDVI-----VYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCK 307
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM-KSDDCLPDTS 372
+ + + + + E+ C P V T+++ L K++++ EA + E+M ++ D P
Sbjct: 308 DNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVV 367
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
YS++I L KA R+ DA + + M++ G VP+V+TY +I + C + A +L Q+M
Sbjct: 368 TYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRM 427
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
E C D Y L++ CR ++ ++ M + + + +++V GL + ++
Sbjct: 428 HERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRV 487
Query: 493 ELACSFFEEM 502
E A E+M
Sbjct: 488 EEARLLMEKM 497
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/398 (27%), Positives = 177/398 (44%), Gaps = 16/398 (4%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL-----ATMS 201
FF WAK + G+ H N++++V + + K DEL V+L T
Sbjct: 3 FFQWAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFK--DEL----VTLFRPDDFTYG 56
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
T++R + + AV MK G+ L+ L + N + A ++F + D
Sbjct: 57 TLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDM 116
Query: 262 -IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV 320
+ + ++ ++I CK K+D A + M Q G PD V+YT + + + +
Sbjct: 117 KVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQG 176
Query: 321 DDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFI 380
+EM KG P ++TY V++ KA +I++AL + ++K P S YS+LI
Sbjct: 177 HQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDG 236
Query: 381 LSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
L K R +A E+FE G V +V+ Y + IS C + + A + KM E C PD
Sbjct: 237 LCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPD 294
Query: 441 CETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
+Y ++ C+ R+ L+ + LV GL +S ++E AC E
Sbjct: 295 PVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILE 354
Query: 501 EMISKG-IVPYHSTYKMLEEKLEKK-RLGNAKERINKL 536
M+ G P TY + + L K RL +A + K+
Sbjct: 355 RMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKM 392
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 147/320 (45%), Gaps = 8/320 (2%)
Query: 227 GVEKDTRALSVLMDTLVKGNSVEHAYKVFL-EFKDCIPLSSQIFNILIHGWCKTRKVDDA 285
G + +T + L++ V AY+VF E + LI G+CK ++ A
Sbjct: 12 GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71
Query: 286 QKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
+ EM G +P +V++ I C K +M + KP YT+V+
Sbjct: 72 VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
L K +++ A +E+M CLPD Y+ L+ L KA + + ++IFE+M +G P
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
++TY T+++ C + AL L+++++ P Y+ L+ C+ R L
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELF- 250
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-K 524
M DV D Y S + GL ++GKL+ A + +MI G P +Y ++ L K
Sbjct: 251 EMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDN 309
Query: 525 RLGNAKERINKLLAHAKEQK 544
R+ AKE L+ A E+K
Sbjct: 310 RVSEAKE----LMDQAMERK 325
>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
Length = 987
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 110/487 (22%), Positives = 217/487 (44%), Gaps = 61/487 (12%)
Query: 71 GWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLV 130
G+ ++ R+++ R+ S ++S N + D+ +++ +K C + + +
Sbjct: 397 GYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINV----------LIKKCRLKEAKETL 446
Query: 131 EQTLRRFSNDLTPAFGFFT-----WAKT--------------QTGYMHTPEMYNTMVDVL 171
+ F+N L P +T + K G Y +++ L
Sbjct: 447 NEM---FANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGL 503
Query: 172 GKSKKFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
+ KK L+ +M D + G ++ +T+++ + +D+A F M+K G+
Sbjct: 504 IQDKKLHKAMALITKMQEDGITPGVIAY---TTLIQGQCKKHEFDNAFRLFEMMEKNGLT 560
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
D +A +VL D L K E AY + + + L+ + L+ G+ K D A +
Sbjct: 561 PDEQAYNVLTDALCKSGRAEEAYSFLV--RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLI 618
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
++M +G D+ +Y+ ++ C++K + L +M G K +++ YTI++ + K
Sbjct: 619 EKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKE 678
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+ + A ++ +M S P + Y+ I K G++++A + +M++ GV P+V+TY
Sbjct: 679 GKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTY 738
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF------- 462
+ I+ + A L++M + C+P+C TY LLK +M ++N
Sbjct: 739 HIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLK---HFLKMSLINAHYIDTSG 795
Query: 463 ------------LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
LL M K+ ++ TY+S++ G ++ +LE AC + M+ K I P
Sbjct: 796 MWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPN 855
Query: 511 HSTYKML 517
Y ML
Sbjct: 856 EEIYTML 862
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 122/472 (25%), Positives = 213/472 (45%), Gaps = 29/472 (6%)
Query: 77 RLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRR 136
RL R ++ V S + V ++ ++LS + + A K SV+ + V R
Sbjct: 3 RLPTLPRPAAAVASTSTPDIVAELGRVLSTRRWNKG---SAYKRLSPSVTAAHVADLFRA 59
Query: 137 FSNDLTPA--FGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY 194
+ L PA FF W + G+ HT + ++ +L + + D+L
Sbjct: 60 PVSPLDPATALAFFEWVARRPGFRHTAASHAALLQLLARRRA-------PANYDKLVLSM 112
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+S + + +R V DA++A R + + + ++ + +L++ + E+ K+
Sbjct: 113 ISCSGTAEDVREAV------DAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKL 166
Query: 255 F--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+ L + +P + +N +I +CK + A + + + G D + + YC
Sbjct: 167 YSHLVQEGLLP-DTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYC 225
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
R D RK L M GC+ + +YTI++ L +A+ + EAL + M D C +
Sbjct: 226 RTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLH 285
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y+ LI L K GR+ DA + ++M +GVVP+V TYN MI C ++AL + M
Sbjct: 286 MYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 345
Query: 433 EEDLCKPDCETYAPLLKMCCRKK---RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
E++ C PD TY L+ C K ++LN + F V T+ +L+ G ++
Sbjct: 346 EQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVI----TFTNLINGYCKA 401
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHA 540
+++ A MIS Y +L L KK RL AKE +N++ A+
Sbjct: 402 ERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANG 453
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 170/374 (45%), Gaps = 6/374 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
Q G MY ++ L K + L+ EM L S+ T + ++ + GR
Sbjct: 276 VQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEM-PLRGVVPSVWTYNAMIDGYCKSGR 334
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNIL 272
DA+ M++ G D + L+ L G E + + F L
Sbjct: 335 MKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVITFTNL 394
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I+G+CK ++DDA + M D+ +Y I ++ ++ +TL EM G
Sbjct: 395 INGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGL 454
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
P+V+ YT ++ K + AL+V++ M+ + C P+ Y SLI+ L + ++ A
Sbjct: 455 APNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMA 514
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ M++ G+ P V+ Y T+I C + E +NA +L + ME++ PD + Y L C
Sbjct: 515 LITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALC 574
Query: 453 RKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
+ R + +FL+ + V + TY SLV G ++G + A E+M+++G
Sbjct: 575 KSGRAEEAYSFLV----RKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADL 630
Query: 512 STYKMLEEKLEKKR 525
TY +L + L K++
Sbjct: 631 YTYSVLLQALCKQK 644
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 100/420 (23%), Positives = 170/420 (40%), Gaps = 26/420 (6%)
Query: 122 GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMW 181
GV +L++ ++ D AF F + + G + YN + D L KS + +
Sbjct: 527 GVIAYTTLIQGQCKKHEFD--NAFRLFEMME-KNGLTPDEQAYNVLTDALCKSGRAEEAY 583
Query: 182 ELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
+ + G V + T ++++ + G D A M G + D SVL+
Sbjct: 584 SFL-----VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQ 638
Query: 241 TLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L K + A + + + + + I+I K K D A+ EM G P
Sbjct: 639 ALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKP 698
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+YT FI YC+ + + + EM+ G P V+TY I ++ G ++ A
Sbjct: 699 SATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTL 758
Query: 360 EKMKSDDCLPDTSFYSSLI--FI---LSKAGRVKDAN-----------EIFEDMKKQGVV 403
++M C P+ Y L+ F+ L A + + ++ E M K G+
Sbjct: 759 KRMVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLN 818
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P V+TY+++I+ C + E A LL M P+ E Y L+K CC K
Sbjct: 819 PTVVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSF 878
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+T M + +Y L+ GL + G + A S F +++ +K+L + L K
Sbjct: 879 VTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLK 938
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 161/370 (43%), Gaps = 7/370 (1%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
+ Y +++VL K + E + EM NG ++ ++I+ + G A+E F
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEM--FANGLAPNVVIYTSIIDGYCKVGMVGAALEVF 481
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKT 279
+ M+ G + L+ L++ + A + + + D I + LI G CK
Sbjct: 482 KLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKK 541
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+ D+A + + M + G +PD +Y + C+ + ++ + KG + +TY
Sbjct: 542 HEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVLTKVTY 598
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ KA + A + EKM ++ C D YS L+ L K ++ +A I + M
Sbjct: 599 TSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTV 658
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
GV N++ Y +IS + ++A L +M KP TY + C+ +++
Sbjct: 659 SGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEE 718
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L+ M ++ V+ D TY + G G ++ A S + M+ P TY +L +
Sbjct: 719 AEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLK 778
Query: 520 KLEKKRLGNA 529
K L NA
Sbjct: 779 HFLKMSLINA 788
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 164/386 (42%), Gaps = 20/386 (5%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYD 214
G + T Y ++VD K+ L+++M +N G L T S +++ L + + +
Sbjct: 590 GVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM--VNEGCKADLYTYSVLLQALCKQKKLN 647
Query: 215 DAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILI 273
+A+ M GV+ + A ++++ ++K +HA +F E S+ + + I
Sbjct: 648 EALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFI 707
Query: 274 HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCK 333
+CK ++++A+ + EM + G +PDVV+Y FI + TLK M + C+
Sbjct: 708 SSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCE 767
Query: 334 PSVITYTIVMHALGKAK----------------QINEALKVYEKMKSDDCLPDTSFYSSL 377
P+ TY +++ K ++N ++ E+M P YSS+
Sbjct: 768 PNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSI 827
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I KA R+++A + + M + + PN Y +I C + + M E
Sbjct: 828 IAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGF 887
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
+P E+Y L+ C + L + D + + + L GL+++G ++
Sbjct: 888 QPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQ 947
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
M ++ +Y ML + + +
Sbjct: 948 LLAAMDNRHCRIDSESYSMLTDSIRE 973
>gi|255547147|ref|XP_002514631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546235|gb|EEF47737.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 569
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/367 (26%), Positives = 172/367 (46%), Gaps = 16/367 (4%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWEL 183
S++ S++ QTL + GF W + +T E + +D G+ K F EL
Sbjct: 156 SITPSIILQTLNLSPDAGRTVLGFHQWLVKVANFKNTDETISFFIDYFGRRKDFQSTHEL 215
Query: 184 VKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK-YGVEKDTRALSVLMDTL 242
+ + ++ + +++ RLVR GR + F M++ YG ++D L +++ L
Sbjct: 216 LCDSKDV----IGYKCFESMVNRLVRAGRATKVMGFFDRMERDYGFKRDRENLRLVVKML 271
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
+A K+ + I I ++LI GWC K+D+A++ EM++ GF V
Sbjct: 272 CDNGYASYAEKMVKNLANEIFPDENICDLLIKGWCVDGKLDEAKRLAGEMYRGGFEIGTV 331
Query: 303 SYTCFIE---HYCREKDFRK----VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
+Y ++ CREKD K V+ L EM +G +V T+ +++ L K ++ +A
Sbjct: 332 AYNAILDCVCKLCREKDPFKIESEVEKVLVEMDTRGVPRNVETFNVLITNLCKMRKTQDA 391
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL---TYNTM 412
L ++ +M+ C PD + + LI L +A RV + +E+ + MK G N L Y
Sbjct: 392 LNLFNRMREWGCDPDDTTFLVLIRSLYQAARVGEGDEMIDRMKSSG-YGNKLDKKAYYGF 450
Query: 413 ISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
+ C E+A+ + + M+ D CKP +TY L+ C + R+ N L +N V
Sbjct: 451 LKILCGIERLEHAVSVFEMMKADGCKPGIKTYDLLIGKWCTRNRVDKGNALFNEALRNGV 510
Query: 473 SMDAGTY 479
+ Y
Sbjct: 511 PVAPKEY 517
>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
Length = 709
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 109/416 (26%), Positives = 188/416 (45%), Gaps = 22/416 (5%)
Query: 130 VEQTLRRFSNDLTPA-----------------FGFFTWAKTQTGYMHTPEMYNTMVDVLG 172
+E LR F LTP+ F FF WA Q Y H PE+++ M+ +L
Sbjct: 80 LEAQLRHFLRALTPSQVRAVLRAQAQRDARAAFEFFRWADRQWKYRHAPEVFDEMLALLS 139
Query: 173 KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDT 232
+++ +V+ M + +M R G+ A+ + M+K G D
Sbjct: 140 RTRLHDPARRVVRLMIRRGI-RRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDI 198
Query: 233 RALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMK 290
+V ++ LV V+ A + F E + + + +N LI G C R++ +A + +
Sbjct: 199 CICNVAVNVLVVAGRVDKALE-FAERMRRVGVDPDVVTYNCLIKGLCGARRIVEALEMIG 257
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ-EKGCKPSVITYTIVMHALGKA 349
M Q G PD +SY + C+EK +V + L+ M+ + G P ITY +++H L K
Sbjct: 258 SMLQNGCPPDKISYFTVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKH 317
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+EAL + + D YS+++ GR+ +A EI +M +G P+V+TY
Sbjct: 318 GHADEALTFLRESEGKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTY 377
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
+ ++ C E + A K+++ M ++ CKP+ T+ LL C+ + LL +
Sbjct: 378 SAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEE 437
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
+ TY+ ++ G GKL +C +M+ KG P +L L K++
Sbjct: 438 EWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQ 493
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 173/383 (45%), Gaps = 6/383 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T++ L K K+ +W L++ M + T + ++ L + G D+A+ R
Sbjct: 271 YFTVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRES 330
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ D S ++ + + A ++ E K C P ++ ++ G+C+ +
Sbjct: 331 EGKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKGCRP-DVVTYSAVVDGFCRIGE 389
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A+K MK M++ G P+ V++T + C+ + + L + +E+ PS ITY++
Sbjct: 390 LDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSV 449
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+MH + ++ E+ V +M P + LI L K + A + E + +G
Sbjct: 450 IMHGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKG 509
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
NV+ + T+I + + E+AL LL M PD TY ++ RK +MK
Sbjct: 510 CFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEAT 569
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L+ M + TY +++ E G +E + ++M++K + S Y + EKL
Sbjct: 570 ALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLTKQ--GFSSAYNQVIEKL 627
Query: 522 -EKKRLGNAKERINKLLAHAKEQ 543
+L A ++K+L A ++
Sbjct: 628 CAFGKLSEAYNLLSKVLRSASKR 650
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 77/355 (21%), Positives = 168/355 (47%), Gaps = 5/355 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ L +++ E++ M L NG + T+M L + R +
Sbjct: 236 YNCLIKGLCGARRIVEALEMIGSM--LQNGCPPDKISYFTVMSFLCKEKRVAEVWNLLER 293
Query: 223 MKK-YGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTR 280
M+ G+ D ++L+ L K + A E + Q+ ++ ++H +C
Sbjct: 294 MRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSFCLNG 353
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ +A++ + EM +G PDVV+Y+ ++ +CR + + +K M + GCKP+ +T+T
Sbjct: 354 RMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHT 413
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
+++ L K + +EA ++ K + + P YS ++ + G++ ++ ++ M ++
Sbjct: 414 ALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQK 473
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P + N +I + C + A +++ + C + + ++ R+ ++
Sbjct: 474 GFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESA 533
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
LL M+ + D TY +V L GK++ A + E+M+++G++P TY+
Sbjct: 534 LSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTYR 588
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 4/203 (1%)
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
+ +M + +A ++ A++V + M+ D C PD + + +L AGRV A E E M+
Sbjct: 166 FAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERMR 225
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+ GV P+V+TYN +I C AL+++ M ++ C PD +Y ++ C++KR+
Sbjct: 226 RVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVA 285
Query: 459 VLNFLLTHMFKNDVSM--DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ LL M +ND + D TY L+ GL + G + A +F E K Y
Sbjct: 286 EVWNLLERM-RNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSA 344
Query: 517 LEEKL-EKKRLGNAKERINKLLA 538
+ R+ AKE I ++++
Sbjct: 345 IVHSFCLNGRMSEAKEIIGEMIS 367
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 138/319 (43%), Gaps = 44/319 (13%)
Query: 168 VDVLGKSK---KFCLMWELVKEMDELNNGYVS------LATMSTIMRRLVRGGRYDDAVE 218
VD +G S FCL + E E+ +S + T S ++ R G D A +
Sbjct: 337 VDQVGYSAIVHSFCLNGRM-SEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARK 395
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWC 277
+ M K G + +T + L++ L K A+++ + ++ S I +++++HG+
Sbjct: 396 MMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFR 455
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ K+ ++ + +M Q+GF P V I C+E+ + D +++ Q KGC +V+
Sbjct: 456 REGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVV 515
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
+T V+H + + AL + + M + PD Y+ ++ L + G++K+A + E M
Sbjct: 516 NFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKM 575
Query: 398 KKQGVVPNVLTY---------------------------------NTMISSACARSEEEN 424
+G++P +TY N +I CA +
Sbjct: 576 LNRGLLPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLTKQGFSSAYNQVIEKLCAFGKLSE 635
Query: 425 ALKLLQKMEEDLCKPDCET 443
A LL K+ K D +T
Sbjct: 636 AYNLLSKVLRSASKRDAQT 654
>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 892
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 165/365 (45%), Gaps = 12/365 (3%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEM----DELNNGYVSLATMSTIMRRLVRGGRY 213
TP + Y T + L K F + W L++ + LNN + ++ L +GG
Sbjct: 242 TPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNN-----HCFNAVIYGLCQGGIL 296
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNIL 272
D+A E F+ MK G+ D + S+L+D + V+ A +VF E ++ L + ++IL
Sbjct: 297 DEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSIL 356
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I G+CK +VD A + +EM G PDV SY+ I+ +CR+ D +EM
Sbjct: 357 IDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNF 416
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
PS Y ++ K+KQ ALK + M+ PDT + ++ I + A
Sbjct: 417 SPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALA 476
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ E ++ GV N +YN I C S E AL+LL M + PD Y+ L+
Sbjct: 477 LSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFA 536
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
++ + L M K ++ + TY L+ I K+++A F+ M + P
Sbjct: 537 KRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQI 596
Query: 513 TYKML 517
Y L
Sbjct: 597 AYTSL 601
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/451 (25%), Positives = 195/451 (43%), Gaps = 31/451 (6%)
Query: 95 TDVDKISKILSKQYQS---PDKVVEA--LKG-CGVS---VSNSLVEQTLRRFSNDLTPAF 145
D+ + S+IL K Y S P+ V +KG C V V+ L++ R+ F
Sbjct: 224 VDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCF 283
Query: 146 GFFTWAKTQTGYMH--------------TPEMYN--TMVDVLGKSKKFCLMWELVKEMDE 189
+ Q G + P++Y+ ++D + + E+ KEM
Sbjct: 284 NAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMR- 342
Query: 190 LNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
N+G + ++ + S ++ + GR D A+E F MK G+ D + S+L+D + +
Sbjct: 343 -NSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDM 401
Query: 249 EHAYKVFLEFKDCIPLSSQIFNI--LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
+ A K F E S FN LI G+ K+++ +A K + M + G PD ++
Sbjct: 402 DSAIK-FWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNH 460
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
+ YCR+ DF K ++ QE G + +Y +H + + +AL++ M +
Sbjct: 461 ILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRN 520
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
LPD YS+LI +K + A +F M K G+ NV TY +I+ + + + A
Sbjct: 521 VLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAY 580
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+L + M+E PD Y L+ C M L M + S + TY +
Sbjct: 581 RLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEY 640
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ K A +E+M +G+ P Y ML
Sbjct: 641 LKLNKNNQAHKLYEKMKERGVYPDQILYTML 671
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 148/308 (48%), Gaps = 6/308 (1%)
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQ 286
VEK +L+ + +EHA VF+ KD I L+ N L+ + +VD +
Sbjct: 132 VEKSNVVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVR 191
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCR----EKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ + + G P++ +YT + +CR D R+ + L ++ G P+V+TY
Sbjct: 192 LLFEVLIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTY 251
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L K A ++ + + + + ++++I+ L + G + +A+E+F++MK G+
Sbjct: 252 IKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGI 311
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+P+V +Y+ +I C + + A ++ ++M P+ +Y+ L+ C++ R+
Sbjct: 312 LPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALE 371
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY-KMLEEKL 521
+ M + + D +Y+ L+ G G ++ A F+EEM S P Y +++
Sbjct: 372 VFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYY 431
Query: 522 EKKRLGNA 529
+ K+ NA
Sbjct: 432 KSKQFANA 439
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 164/351 (46%), Gaps = 5/351 (1%)
Query: 161 PEMYNTMVDVLGKSKKFCLMWELVKEMDEL--NNGYVSLATMSTIMRRLVRGGRYDDAVE 218
P++Y+ + + G +K M +K +E+ NN S ++++ + ++ +A++
Sbjct: 383 PDVYSYSILIDGFCRK-GDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALK 441
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWC 277
FR M+K G+ DT A + ++ + A + +F+ + + + +N IH C
Sbjct: 442 EFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRIC 501
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ + A + + M ++ PDVV+Y+ I + + + K +M + G +V
Sbjct: 502 RGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVK 561
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TYTI+++ +++ A ++++ MK PD Y+SL+ G + A +F++M
Sbjct: 562 TYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEM 621
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
++G PNV+TY I+ ++ A KL +KM+E PD Y L+ C M
Sbjct: 622 SREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEM 681
Query: 458 KVLNFLLTHMFKND-VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
L M + + + Y L+ I+ K + A +EEM +KG+
Sbjct: 682 NRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGL 732
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 122/242 (50%), Gaps = 2/242 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ ST++ + + AV F M K G+ + + ++L++ + ++ AY++F
Sbjct: 525 VVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFK 584
Query: 257 EFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
K+ QI + L+ G+C T ++ A+ EM ++G SP+VV+YTCFI Y +
Sbjct: 585 GMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLN 644
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD-CLPDTSFY 374
+ ++M+E+G P I YT+++ A ++N A ++++MK + C P+ Y
Sbjct: 645 KNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMY 704
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ LI K + A +++E+M+ +G+ + ++ S C R + KL + ++
Sbjct: 705 TCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWCCRHQVLKTGKLGGRAKQ 764
Query: 435 DL 436
L
Sbjct: 765 GL 766
>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Brachypodium distachyon]
Length = 787
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 190/423 (44%), Gaps = 11/423 (2%)
Query: 135 RRFSNDLTPAFGFFTWAKTQTGYMHT-------PEM--YNTMVDVLGKSKKFCLMWELVK 185
R N L A+ W K T + P++ YN + L ++ K + L
Sbjct: 274 RPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKD 333
Query: 186 EMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
EM+ L + T +T+ + DA+ M++ GV+ ++++ L K
Sbjct: 334 EMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKD 393
Query: 246 NSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+E A + D + +N LIH CK + A M EM ++G D +
Sbjct: 394 GELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTL 453
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ + C+EK + + L+ ++G P ++Y VM A K AL+++++M
Sbjct: 454 NTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIE 513
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
P S Y++LI LS+ GR+K+A + ++ ++G+VP+ TYN +I + C + EN
Sbjct: 514 KKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLEN 573
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A + KM E+ KPD T L+ C ++ L + +D TY +L++
Sbjct: 574 AFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQ 633
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLAHAKEQ 543
+ + G ++ A FF +M ++G+ P TY ++ L E R A+ ++KL
Sbjct: 634 TMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLS 693
Query: 544 KTF 546
++F
Sbjct: 694 QSF 696
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 172/379 (45%), Gaps = 24/379 (6%)
Query: 164 YNTMVDVLGKS----KKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
YNT++ K+ K + LM E+V+ +L+ T++T++ L + RY++A
Sbjct: 418 YNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDT-----FTLNTVLYNLCKEKRYEEAQGL 472
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWC 277
+ + G D + +M K + E A +++ E K P S +N LI G
Sbjct: 473 LQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTP-SISTYNTLIKGLS 531
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ ++ +A + E+ ++G PD +Y I YC+E D +M E KP V+
Sbjct: 532 RMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVV 591
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
T +M+ L ++++ALK++E D Y++LI + K G V A F DM
Sbjct: 592 TCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADM 651
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC----- 452
+ +G+ P+ TYN ++S+ E A +L K+ E + +PLLK
Sbjct: 652 EARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFS-SPLLKPSSVDEAE 710
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
K K +N + Y LV GL SG+ + A + +EM+ KG+ S
Sbjct: 711 SGKDAKTEE----ETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSS 766
Query: 513 TYKMLEEKLEK--KRLGNA 529
TY L E L K KRL +A
Sbjct: 767 TYITLMEGLVKRQKRLTHA 785
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 126/241 (52%), Gaps = 3/241 (1%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FN+L+H C + DA + M G SPD V+Y + +CR+ + L M+
Sbjct: 207 FNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMK 266
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+ G P+ TY ++ A + I +A KV E M ++ PD Y+ L L +AG+V
Sbjct: 267 KDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVD 326
Query: 389 DANEIFEDMKKQG-VVPNVLTYNTMISSACARSE-EENALKLLQKMEEDLCKPDCETYAP 446
+A + ++M++ G ++P+V+TYNT ++ AC + +AL+LL++M E K T+
Sbjct: 327 EAFRLKDEMERLGTLLPDVVTYNT-LADACFKCRCSSDALRLLEEMREKGVKATLVTHNI 385
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++K C+ ++ L M + ++ D TY +L+ ++G + A + +EM+ +G
Sbjct: 386 VIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRG 445
Query: 507 I 507
+
Sbjct: 446 L 446
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 149/344 (43%), Gaps = 37/344 (10%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIF 269
G DA+ M+ +G+ D + L++ + + A + K D + + +
Sbjct: 218 GTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTY 277
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR----EKDFRKVDDT-- 323
N L+ + + + A K ++ M GF PD+ +Y C+ ++ FR D+
Sbjct: 278 NTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMER 337
Query: 324 ------------------------------LKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
L+EM+EKG K +++T+ IV+ L K ++
Sbjct: 338 LGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELE 397
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
AL KM D PD Y++LI KAG + A + ++M ++G+ + T NT++
Sbjct: 398 GALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVL 457
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ C E A LLQ + PD +Y ++ ++ + L M + ++
Sbjct: 458 YNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLT 517
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
TY +L++GL G+L+ A E++ KG+VP +TY ++
Sbjct: 518 PSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNII 561
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 9/235 (3%)
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
A + + P+ ++ + +C + TL MQ G P +TY +++A
Sbjct: 191 AFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHC 250
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
+ + EA + +MK D P Y++L+ ++ G +K A ++ E M G P++
Sbjct: 251 RKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLW 310
Query: 408 TYNTMISSACARSEEENALKLLQKMEE-DLCKPDCETYAPLLKMC----CRKKRMKVLNF 462
TYN + + C + + A +L +ME PD TY L C C ++
Sbjct: 311 TYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALR---- 366
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + V T+ +++GL + G+LE A +M G+ P TY L
Sbjct: 367 LLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTL 421
>gi|22327132|ref|NP_680234.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174514|sp|Q9LKU8.1|PP401_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g28460
gi|9502149|gb|AAF88002.1| contains similarity to Pfam family PF01535 (Domain of unknown
function), score=340.5, E=1.9e-98, N=2 [Arabidopsis
thaliana]
gi|15529206|gb|AAK97697.1| AT5g28460/F21B23_120 [Arabidopsis thaliana]
gi|27363272|gb|AAO11555.1| At5g28460/F21B23_120 [Arabidopsis thaliana]
gi|332006418|gb|AED93801.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 142 bits (359), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 181/375 (48%), Gaps = 14/375 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ LG++ M +LV +MDE+ + T+ ++ L + R D+A+E F M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVK-IRPDVVTLGILINTLCKSRRVDEALEVFEQM 355
Query: 224 KKYG------VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK---DCIPLSSQIFNILIH 274
+ ++ D+ + L+D L K ++ A ++ + K C+P ++ +N LI
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVP-NAVTYNCLID 414
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C+ K++ A++ + M + P+VV+ + CR +M+++G K
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V+TY ++HA + +A+ YEKM C PD Y +LI L + R DA +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
E +K+ G ++L YN +I C ++ E ++L ME++ KPD TY L+ +
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM-ISKGIVPYHST 513
K + + ++ M ++ + TY +++ G+L+ A F++M + + P
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 514 YKMLEEKLEKKRLGN 528
Y +L K LGN
Sbjct: 655 YNILINAFSK--LGN 667
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 165/335 (49%), Gaps = 11/335 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YN ++D ++ K E+V M DE+ V T++TI+ + R + AV F
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV---TVNTIVGGMCRHHGLNMAVVFFM 465
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHA---YKVFLEFKDCIPLSSQIFNILIHGWCK 278
M+K GV+ + L+ ++VE A Y+ LE C P ++I+ LI G C+
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE-AGCSP-DAKIYYALISGLCQ 523
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R+ DA + ++++ + GFS D+++Y I +C + + KV + L +M+++G KP IT
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ GK K ++ E+M+ D P + Y ++I G + +A ++F+DM
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 399 KQGVV-PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
V PN + YN +I++ AL L ++M+ + +P+ ETY L K K +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
+ L L+ M + + T L+ L S +L
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITMEILMERLSGSDEL 738
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 177/389 (45%), Gaps = 53/389 (13%)
Query: 176 KFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRAL 235
K ++E+ KE N +++ ++R R G + +V + + K+++
Sbjct: 135 KLLRLYEIAKE----KNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVR 188
Query: 236 SVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQ--KAMK 290
+V++D L++ V+ A+KV L+ + P + +I++H K R + + + +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALIS 248
Query: 291 EMFQQGFSPDVVSYTCFIEHYC-----------------------------------REK 315
G SP+ V T FI C R
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM---KSDD---CLP 369
D +++D + +M E +P V+T I+++ L K+++++EAL+V+E+M ++DD
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMK-KQGVVPNVLTYNTMISSACARSEEENALKL 428
D+ +++LI L K GR+K+A E+ MK ++ VPN +TYN +I C + E A ++
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+ +M+ED KP+ T ++ CR + + M K V + TY +L+
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKML 517
+E A ++E+M+ G P Y L
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 8/224 (3%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFN 270
R DA+ +K+ G D A ++L+ N+ E Y++ + K+ S +N
Sbjct: 526 RDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI + K + + ++ M++M + G P V +Y I+ YC ++D+ LK ++
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC---SVGELDEALKLFKDM 642
Query: 331 G----CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
G P+ + Y I+++A K +AL + E+MK P+ Y++L L++ +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
+ ++ ++M +Q PN +T ++ E K +Q
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 712
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 119/471 (25%), Positives = 208/471 (44%), Gaps = 64/471 (13%)
Query: 125 VSNSLVEQTLRRFSNDLTPAFG--FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWE 182
+S + V QTLR PA G FF W + G+ H + + M++ LG+++
Sbjct: 69 LSRTTVLQTLRLIK---VPADGLRFFDWVYNK-GFSHKEQSFFLMLEFLGRARNLNAARN 124
Query: 183 LVKEMDELNNGYVSLAT--MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
+ +++ +NG V L ++++R G + ++V F+ MKK G+ + L+
Sbjct: 125 FLFSIEKRSNGCVKLQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLS 184
Query: 241 TLVKGNSVEHAYKVFLEFKDCIPLS--SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
L+K A+ +F E + ++ S FN LI G+CK VD A KEM +
Sbjct: 185 ILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCN 244
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK--GCKPSVITYTIVMHALGKAKQINEAL 356
PDVV+Y I+ CR + + L M +K P++++YT ++ ++I+EAL
Sbjct: 245 PDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEAL 304
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSK--------------------------------- 383
V+ +M + P+ Y++LI LS+
Sbjct: 305 LVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKA 364
Query: 384 ---AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE------ 434
AG + A ++F++M + P+ +Y+ +I + C R+E + A L ++ E
Sbjct: 365 HCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLG 424
Query: 435 -DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+ CKP Y + + C + K + + K + D +Y +L+ GL GK +
Sbjct: 425 KNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRG-AQDPSSYRTLITGLCREGKFK 483
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQK 544
A M+ + VP TY++L + L K +G A LLAH Q+
Sbjct: 484 AAYELLVLMLRREFVPDPETYEVLIDGLLK--IGEA------LLAHDTLQR 526
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 102/367 (27%), Positives = 155/367 (42%), Gaps = 27/367 (7%)
Query: 148 FTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEM-DELNNGYVSLATMSTIM 204
FT K Y P++ YNT++D L ++ K + L+ M + + ++ + +T++
Sbjct: 232 FTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLL 291
Query: 205 RRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY---KVFLEFKDC 261
R D+A+ F M G++ + +V +TL+KG S H Y K FL D
Sbjct: 292 RGYCMKQEIDEALLVFHEMLTRGLKPN----AVTYNTLIKGLSEAHRYDEIKGFLIGGDA 347
Query: 262 IPLSSQ---IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
S FNILI C +D A K +EM PD SY+ I C +F
Sbjct: 348 FTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFD 407
Query: 319 KVDDTLKEMQEKG-------CKPSVITYTIVMHAL---GKAKQINEALKVYEKMKSDDCL 368
K + E+ EK CKP Y ++ L GKAKQ A KV+ ++
Sbjct: 408 KAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQ---AEKVFRQLMKRGA- 463
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
D S Y +LI L + G+ K A E+ M ++ VP+ TY +I E A
Sbjct: 464 QDPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDT 523
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
LQ+M P T+ +L ++K LLT M + + + VR +
Sbjct: 524 LQRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFS 583
Query: 489 SGKLELA 495
S + E A
Sbjct: 584 SAQKEKA 590
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 158/325 (48%), Gaps = 1/325 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
S ++ + G DA+E FR +++ + +++ L+K + + + E +
Sbjct: 70 SGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFYKEILE 129
Query: 261 C-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
C P S FNIL+H +CK ++ AQ + + G P VVS+ + Y R D +
Sbjct: 130 CGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQ 189
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
M G +P V TY+++++ L K ++NEA ++ +M +P+ +++LI
Sbjct: 190 GFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLID 249
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
K G+V A E ++ M Q +P+++TYNT+I C + + + A LL +M KP
Sbjct: 250 GHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKP 309
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY L+ C++ + L M K + +D Y +L+ GL + G+ A
Sbjct: 310 DKITYTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKML 369
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKK 524
EM+S G+ P + TY M+ + KK
Sbjct: 370 REMLSVGLKPDNGTYTMIINEFCKK 394
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 153/340 (45%), Gaps = 37/340 (10%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W KE+ L GY SL + +M R + G A F + K+G+
Sbjct: 111 LMKLKYFKLVWGFYKEI--LECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLR 168
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ FN L++G+ + +D K
Sbjct: 169 PSVVS----------------------------------FNTLMNGYIRLGDLDQGFKLK 194
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
M G PDV +Y+ I C+E + +D EM +KG P+ +T+T ++ K
Sbjct: 195 NAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKN 254
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+++ A++ Y++M S LPD Y++LI+ L K G +K A ++ ++M+ +G+ P+ +TY
Sbjct: 255 GKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITY 314
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
T+I C + ++A +L + M ++ + D Y L+ C++ R +L M
Sbjct: 315 TTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLS 374
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ D GTY ++ + ++ A +EM +G VP
Sbjct: 375 VGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVP 414
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 104/215 (48%), Gaps = 9/215 (4%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE- 257
T S ++ L + + ++A + F M G+ + + L+D K V+ A + + +
Sbjct: 208 TYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDSAMETYKQM 267
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C +N LI+G CK + AQ + EM +G PD ++YT I+ C+E D
Sbjct: 268 LSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLIDGNCKEGDL 327
Query: 318 RKVDDTLKEMQEKGCKPSV----ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D+ E++E K S+ + YT ++ L + + +A K+ +M S PD
Sbjct: 328 ----DSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKPDNGT 383
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
Y+ +I K VK A ++ ++M++QG VP V+T
Sbjct: 384 YTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 100/225 (44%)
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
D+ ++ I Y R + + +E + T V+ L K K Y
Sbjct: 65 DIYVFSGLINAYLESGFVRDAIECFRLTREHKLRVPFDTCRKVLEHLMKLKYFKLVWGFY 124
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+++ F++ L+ K G + A +F+ + K G+ P+V+++NT+++
Sbjct: 125 KEILECGYPASLYFFNILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRL 184
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ + KL M +PD TY+ L+ C++ +M N L M + + T+
Sbjct: 185 GDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTF 244
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
+L+ G ++GK++ A +++M+S+ +P TY L L KK
Sbjct: 245 TTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKK 289
>gi|15222997|ref|NP_172253.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180186|sp|Q9LQQ1.1|PPR20_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g07740, mitochondrial; Flags: Precursor
gi|8439893|gb|AAF75079.1|AC007583_15 It contains PPR repeats PF|01535 [Arabidopsis thaliana]
gi|14596021|gb|AAK68738.1| Unknown protein [Arabidopsis thaliana]
gi|31376389|gb|AAP49521.1| At1g07730 [Arabidopsis thaliana]
gi|51970836|dbj|BAD44110.1| hypothetical protein [Arabidopsis thaliana]
gi|332190050|gb|AEE28171.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 459
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 168/355 (47%), Gaps = 2/355 (0%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ H Y++++ L KS+ F + ++++ + N + +++ + G
Sbjct: 74 EMGFRHDYPSYSSLIYKLAKSRNFDAVDQILR-LVRYRNVRCRESLFMGLIQHYGKAGSV 132
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNIL 272
D A++ F + + + ++L+ L++ LV +E A F KD + +S FNIL
Sbjct: 133 DKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNIL 192
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I G+ + A K EM + P VV+Y I CR D K L++M +K
Sbjct: 193 IKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRI 252
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+P+ +T+ ++M L + NEA K+ M+ C P Y L+ L K GR+ +A
Sbjct: 253 RPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDLGKRGRIDEAKL 312
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ +MKK+ + P+V+ YN +++ C A ++L +M+ CKP+ TY ++ C
Sbjct: 313 LLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFC 372
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
R + +L M + T+ +V GLI+ G L+ AC E M K +
Sbjct: 373 RIEDFDSGLNVLNAMLASRHCPTPATFVCMVAGLIKGGNLDHACFVLEVMGKKNL 427
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 122/256 (47%), Gaps = 6/256 (2%)
Query: 280 RKVDDAQKAMKEMFQQ----GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
++++D ++A+ +F Q GF D SY+ I + ++F VD L+ ++ + +
Sbjct: 57 KEIEDPEEAL-SLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCR 115
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ ++ GKA +++A+ V+ K+ S DC+ ++LI +L G ++ A F+
Sbjct: 116 ESLFMGLIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFD 175
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
K + PN +++N +I + + E A K+ +M E +P TY L+ CR
Sbjct: 176 GAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRND 235
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
M LL M K + +A T+ L++GL G+ A +M +G P Y
Sbjct: 236 DMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYG 295
Query: 516 MLEEKLEKK-RLGNAK 530
+L L K+ R+ AK
Sbjct: 296 ILMSDLGKRGRIDEAK 311
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/306 (22%), Positives = 126/306 (41%), Gaps = 3/306 (0%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNI 271
++A+ F ++ G D + S L+ L K + + ++ + +++ + +F
Sbjct: 63 EEALSLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRN-VRCRESLFMG 121
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI + K VD A ++ + S I + K ++
Sbjct: 122 LIQHYGKAGSVDKAIDVFHKITSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMR 181
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+P+ +++ I++ A KV+++M + P Y+SLI L + + A
Sbjct: 182 LRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNDDMGKAK 241
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ EDM K+ + PN +T+ ++ C + E A KL+ ME CKP Y L+
Sbjct: 242 SLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLMFDMEYRGCKPGLVNYGILMSDL 301
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
++ R+ LL M K + D Y LV L ++ A EM KG P
Sbjct: 302 GKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCTECRVPEAYRVLTEMQMKGCKPNA 361
Query: 512 STYKML 517
+TY+M+
Sbjct: 362 ATYRMM 367
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 3/226 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T ++++ L R A M K + + +LM L A K+
Sbjct: 220 SVVTYNSLIGFLCRNDDMGKAKSLLEDMIKKRIRPNAVTFGLLMKGLCCKGEYNEAKKLM 279
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+E++ C P + IL+ K ++D+A+ + EM ++ PDVV Y + H C
Sbjct: 280 FDMEYRGCKPGLVN-YGILMSDLGKRGRIDEAKLLLGEMKKRRIKPDVVIYNILVNHLCT 338
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E + L EMQ KGCKP+ TY +++ + + + L V M + P +
Sbjct: 339 ECRVPEAYRVLTEMQMKGCKPNAATYRMMIDGFCRIEDFDSGLNVLNAMLASRHCPTPAT 398
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+ ++ L K G + A + E M K+ + + ++S C +
Sbjct: 399 FVCMVAGLIKGGNLDHACFVLEVMGKKNLSFGSGAWQNLLSDLCIK 444
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/470 (23%), Positives = 196/470 (41%), Gaps = 71/470 (15%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVL-------------------------------- 171
A+ FF W++ Q Y H E Y ++VDVL
Sbjct: 117 AWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFPMTVSAANALI 176
Query: 172 ------GKSKKFCLMWELVKE---------MDELNNGYVS-------------------- 196
G ++ +W +KE + L NG VS
Sbjct: 177 KSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMESGRIK 236
Query: 197 --LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+ T +T+++ + G+ A+E R M+ G E D ++ + +
Sbjct: 237 PDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGSCVAL 296
Query: 255 FLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ E + I + F+++I G CK K+++ + M ++G P+V YT I+ Y +
Sbjct: 297 YQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAK 356
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
L M ++G KP V+TY++V++ L K ++ EAL + + D ++ F
Sbjct: 357 SGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMF 416
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM- 432
YSSLI L KAGRV +A +FE+M ++G + YN +I + + + A+ L ++M
Sbjct: 417 YSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRME 476
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
EE+ C TY LL ++ R + L M ++ A + +L GL SGK+
Sbjct: 477 EEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKV 536
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKE 542
AC +E+ G++ + M+ + R+ A + + + +E
Sbjct: 537 ARACKILDELAPMGVILDAACEDMINTLCKAGRIKEACKLADGITERGRE 586
>gi|15241779|ref|NP_198189.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|9502152|gb|AAF88005.1| similar to a large family of Arabidopsis thaliana salt inducible
protein-like proteins; contains similarity to Pfam
family PF01535 (Domain of unknown function),
score=340.5, E=1.9e-98, N=2 [Arabidopsis thaliana]
gi|332006410|gb|AED93793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 181/375 (48%), Gaps = 14/375 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ LG++ M +LV +MDE+ + T+ ++ L + R D+A+E F M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVK-IRPDVVTLGILINTLCKSRRVDEALEVFEQM 355
Query: 224 KKYG------VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK---DCIPLSSQIFNILIH 274
+ ++ D+ + L+D L K ++ A ++ + K C+P ++ +N LI
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVP-NAVTYNCLID 414
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C+ K++ A++ + M + P+VV+ + CR +M+++G K
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V+TY ++HA + +A+ YEKM C PD Y +LI L + R DA +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
E +K+ G ++L YN +I C ++ E ++L ME++ KPD TY L+ +
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM-ISKGIVPYHST 513
K + + ++ M ++ + TY +++ G+L+ A F++M + + P
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 514 YKMLEEKLEKKRLGN 528
Y +L K LGN
Sbjct: 655 YNILINAFSK--LGN 667
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 160/316 (50%), Gaps = 11/316 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YN ++D ++ K E+V M DE+ V T++TI+ + R + AV F
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV---TVNTIVGGMCRHHGLNMAVVFFM 465
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHA---YKVFLEFKDCIPLSSQIFNILIHGWCK 278
M+K GV+ + L+ ++VE A Y+ LE C P ++I+ LI G C+
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE-AGCSP-DAKIYYALISGLCQ 523
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R+ DA + ++++ + GFS D+++Y I +C + + KV + L +M+++G KP IT
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ GK K ++ E+M+ D P + Y ++I G + +A ++F+DM
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 399 KQGVV-PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
V PN + YN +I++ AL L ++M+ + +P+ ETY L K K +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 458 KVLNFLLTHMFKNDVS 473
+ L L+ M ++ V+
Sbjct: 704 ETLLKLMDEMVEHLVN 719
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 177/389 (45%), Gaps = 53/389 (13%)
Query: 176 KFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRAL 235
K ++E+ KE N +++ ++R R G + +V + + K+++
Sbjct: 135 KLLRLYEIAKE----KNIPLTIVATKLLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVR 188
Query: 236 SVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQ--KAMK 290
+V++D L++ V+ A+KV L+ + P + +I++H K R + + + +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKERLLTEEKIIALIS 248
Query: 291 EMFQQGFSPDVVSYTCFIEHYC-----------------------------------REK 315
G SP+ V T FI C R
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANTAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM---KSDD---CLP 369
D +++D + +M E +P V+T I+++ L K+++++EAL+V+E+M ++DD
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMK-KQGVVPNVLTYNTMISSACARSEEENALKL 428
D+ +++LI L K GR+K+A E+ MK ++ VPN +TYN +I C + E A ++
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+ +M+ED KP+ T ++ CR + + M K V + TY +L+
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKML 517
+E A ++E+M+ G P Y L
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 117/463 (25%), Positives = 213/463 (46%), Gaps = 32/463 (6%)
Query: 100 ISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMH 159
IS +++K DK +++L ++ L + + SN++ FF W Q+ Y +
Sbjct: 22 ISNLINKPNWEHDKTLKSLAS---HMTPHLAGKIIGLQSNNVELGVRFFKWVCRQSSYCY 78
Query: 160 T----PEMYNTMV--DVLGKSKKFCLMWELVKEMDELNNGYVSLATM------------- 200
++ +V D+ G ++K ++ L++E ++ NG V L
Sbjct: 79 DLDGRIQLLGVLVSRDLFGVAQKAVVL--LIQECEDSENGVVKLMGALDGMTELGFRLSY 136
Query: 201 ---STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
ST++ L + A +R M G +++ L K V+ A +
Sbjct: 137 PCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCK 196
Query: 258 -FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF-QQGFSPDVVSYTCFIEHYCREK 315
+ L + + L+ C+ + +A + ++M ++ P+ V+Y+ I C
Sbjct: 197 VLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAG 256
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ +EM EKGC+PS TYT+++ A ++A+K+ ++M + C+P+ Y+
Sbjct: 257 RLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYT 316
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
LI L + G++++AN +F M K G+ P ++T+N +I+ C +A +LL ME+
Sbjct: 317 ILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKG 376
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
CKP+ TY L++ CR + LL + N + D TY LV G + G+L +A
Sbjct: 377 NCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMA 436
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
+ F M S G+ P T+ L + L K LG E+ N +L
Sbjct: 437 FNIFNSMNSAGLEPDGFTFTALIDGLCK--LGRL-EQANGILG 476
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 157/336 (46%), Gaps = 8/336 (2%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTR----ALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLS 265
R DD EAFR +K E++ R S+L+ L + +E A+++ E K C P S
Sbjct: 218 RRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP-S 276
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
++ + +LI C D A K + EM + P+V +YT I+ CRE + + +
Sbjct: 277 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFR 336
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
+M + G P +IT+ +++ K + A ++ M+ +C P+ Y+ L+ L +
Sbjct: 337 KMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVS 396
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ A + + G++P+ +TYN ++ C + A + M +PD T+
Sbjct: 397 KSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFT 456
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ C+ R++ N +L M K +S+D T+ +L+ G + GK + C FE M+
Sbjct: 457 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 516
Query: 506 GIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHA 540
+ T+ + L K +L A + K++ +
Sbjct: 517 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYG 552
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 186/384 (48%), Gaps = 11/384 (2%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGG 211
T+ G+ + Y+T++ L K + + + + M +N G+V T++ L + G
Sbjct: 128 TELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRM--VNEGFVLGGIDYRTVVNALCKNG 185
Query: 212 RYDDAVEAFR-GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF---KDCIPLSSQ 267
+ A E F + + G DT + L+ + + + A++VF + ++C P +S
Sbjct: 186 -FVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRP-NSV 243
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
++ILIHG C+ ++++A + +EM ++G P +YT I+ C K L EM
Sbjct: 244 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 303
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
K C P+V TYTI++ L + +I EA V+ KM P +++LI K G V
Sbjct: 304 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 363
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A ++ M+K PN+ TYN ++ C S+ A LL+++ ++ PD TY L
Sbjct: 364 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 423
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C++ ++ + + M + D T+ +L+ GL + G+LE A M+ KGI
Sbjct: 424 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 483
Query: 508 VPYHSTYKMLEEKLEKKRLGNAKE 531
T+ L + ++G AK+
Sbjct: 484 SLDEVTFTALIDG--HCKIGKAKD 505
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 158/355 (44%), Gaps = 36/355 (10%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD----------------TL 242
T + ++ RL R G+ ++A FR M K+G+ + L++ +
Sbjct: 314 TYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVM 373
Query: 243 VKGNS----------------VEHAYKVFLEFKDCIP---LSSQI-FNILIHGWCKTRKV 282
KGN V +YK FL + + L ++ +NIL+ G+CK ++
Sbjct: 374 EKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQL 433
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ A M G PD ++T I+ C+ + + L M +KG +T+T +
Sbjct: 434 NMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 493
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ K + + ++E M + CL ++ + L K ++ +AN + M K G+
Sbjct: 494 IDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGL 553
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
VP+V+T+ +I C E +LK+L++M++ C P+ TY ++ C R++
Sbjct: 554 VPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAET 613
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+L M VS + TYA LV+ +++G+L+ A M+ G P Y L
Sbjct: 614 ILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSAL 668
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 148/324 (45%), Gaps = 3/324 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T S ++ L GR ++A + + M + G + TR +VL+ + A K+ E
Sbjct: 243 VTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDE 302
Query: 258 F--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
K C+P + + ILI C+ K+++A ++M + G P ++++ I YC+E
Sbjct: 303 MATKACVP-NVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEG 361
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
L M++ CKP++ TY +M L + + +A + ++ + LPD Y+
Sbjct: 362 WVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYN 421
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
L+ K G++ A IF M G+ P+ T+ +I C E A +L M +
Sbjct: 422 ILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKK 481
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
D T+ L+ C+ + K + FL +M +N A T+ + L + KL A
Sbjct: 482 GISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEA 541
Query: 496 CSFFEEMISKGIVPYHSTYKMLEE 519
+ +M+ G+VP T+ +L E
Sbjct: 542 NAMLGKMMKYGLVPSVVTHTILIE 565
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/313 (19%), Positives = 134/313 (42%), Gaps = 46/313 (14%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
+GK+K C ++E + E N + T + + L + + ++A M KYG+
Sbjct: 500 IGKAKDVCFLFENMVE----NRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVP 555
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKA 288
++L++ + + K+ K C P + + I+I+G C +V++A+
Sbjct: 556 SVVTHTILIEGHCRAGETALSLKMLERMKQAGCSP-NVYTYTIIINGLCNNGRVEEAETI 614
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH---- 344
+ M G SP+ +Y ++ + + + + M + GC+P+ Y+ ++
Sbjct: 615 LFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVL 674
Query: 345 ---ALG------------------------------KAKQINEALKVYEKMKSDDCLPDT 371
A+G + ++ ALK+ +++K +P
Sbjct: 675 SNTAIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCG-VPTE 733
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y+ L+ L K GR+ +A+++ +DM K G+ P+ +++I C + +N L+ ++
Sbjct: 734 DLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDK-AISSIIEHYCKTCKYDNCLEFMKL 792
Query: 432 MEEDLCKPDCETY 444
+ ++ P +Y
Sbjct: 793 VLDNKFVPSFASY 805
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 82/197 (41%), Gaps = 38/197 (19%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNS----------- 247
T + +++ V+ GR D A + M K G + ++ S L+ V N+
Sbjct: 629 TYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTG 688
Query: 248 --------------------------VEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRK 281
V+HA K+ E K C + ++N L+ G CK +
Sbjct: 689 DLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGR 748
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A + ++M + G PD + + IEHYC+ + + +K + + PS +Y
Sbjct: 749 IIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCW 807
Query: 342 VMHALGKAKQINEALKV 358
V+H L ++ EA K+
Sbjct: 808 VIHGLRNEGRVQEAQKL 824
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 100/344 (29%), Positives = 167/344 (48%), Gaps = 20/344 (5%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDDAVEAFR 221
MY+T++D L K K + L EM + G + ++ T S ++ L + + A+
Sbjct: 149 MYSTIIDSLCKGKFVTDAYRLYSEM--IAKGIFPNVYTFSILVDALCKDRKGKQAMNLLA 206
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTR 280
M K GV+ + +MD N V A +F + ++ + + +NI+I+G CK +
Sbjct: 207 MMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKK 266
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+VD+A KEM + +PDVV+Y I+ C+ + + EM+ G +ITY
Sbjct: 267 RVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYN 326
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++HAL K +++A+ + +++K P+ Y++LI L K GR++DA IF+++ +
Sbjct: 327 SLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTE 386
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G V TYN MI+ C + + AL LL +ME++ C PD +Y ++ K
Sbjct: 387 GYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKT 446
Query: 461 NFLLTHM--------FKNDVSMDA--------GTYASLVRGLIE 488
N LL M K V+M YASL G+I
Sbjct: 447 NKLLCAMIVRGLSKRLKKKVNMTTIADLNDKWAAYASLEDGMIH 490
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 166/339 (48%), Gaps = 9/339 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+ +M L + G A++ R K V D S ++D+L KG V AY+++ E
Sbjct: 119 AILMNGLCKMGETRAAMQMLR---KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIA 175
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K P + F+IL+ CK RK A + M ++G P+VV+Y ++ YC
Sbjct: 176 KGIFP-NVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVN 234
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
K + M ++G +P+V Y I+++ L K K+++EA+ ++++M PD Y+ LI
Sbjct: 235 KALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILI 294
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L K G++ + E+ ++M+ G +++TYN+++ + C + A+ L++++++ +
Sbjct: 295 DGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQ 354
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
P+ TY L+ C+ R++ + + + TY ++ GL + G + A +
Sbjct: 355 PNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALAL 414
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
M +P +Y+ + L +K + NKLL
Sbjct: 415 LSRMEDNACIPDAVSYETIIYALSEK---GETVKTNKLL 450
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 166/331 (50%), Gaps = 8/331 (2%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T+++ + G+ +A+ + +G + D + ++LM+ L K A ++
Sbjct: 82 TFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQMLR-- 139
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K + +++ +I CK + V DA + EM +G P+V +++ ++ C+++ +
Sbjct: 140 KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGK 199
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + L M +KG KP+V+TY +M Q+N+AL ++ M + P+ Y+ +I
Sbjct: 200 QAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIII 259
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
L K RV +A +F++M + + P+V+TYN +I C + +L+L+ +M
Sbjct: 260 NGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKT 319
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
D TY LL C+ + L+ + + + TY +L+ GL + G+LE A
Sbjct: 320 VDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVI 379
Query: 499 FEEMISKGIVPYHS---TYKMLEEKLEKKRL 526
F+E++++G YH TY ++ L KK L
Sbjct: 380 FQEILTEG---YHITVWTYNVMINGLCKKGL 407
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 151/334 (45%), Gaps = 3/334 (0%)
Query: 177 FCLMWELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRA 234
C M E M L +V+ + STI+ L +G DA + M G+ +
Sbjct: 125 LCKMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184
Query: 235 LSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
S+L+D L K + A + + K + + + ++ G+C +V+ A M
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMV 244
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q+G P+V Y I C++K + + KEM K P V+TY I++ L K +I+
Sbjct: 245 QEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIS 304
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
+L++ ++M+S D Y+SL+ L K + A + +++K QG+ PNV TY T+I
Sbjct: 305 TSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLI 364
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
C E+A + Q++ + TY ++ C+K LL+ M N
Sbjct: 365 DGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACI 424
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
DA +Y +++ L E G+ MI +G+
Sbjct: 425 PDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 8/315 (2%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDC 261
I+ LV+ Y A+ FR ++ G++ L++LM+ + + + + K
Sbjct: 16 ILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKMG 75
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+S F LI G C + +A + GF D VSY + C+ + R
Sbjct: 76 YEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRA-- 133
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
++ +++ V+ Y+ ++ +L K K + +A ++Y +M + P+ +S L+ L
Sbjct: 134 -AMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDAL 192
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K + K A + M K+GV PNV+TY ++ C ++ AL + M ++ +P+
Sbjct: 193 CKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNV 252
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
Y ++ C+KKR+ L M ++ D TY L+ GL + GK+ + +E
Sbjct: 253 WCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDE 312
Query: 502 MISKG----IVPYHS 512
M S G I+ Y+S
Sbjct: 313 MRSIGKTVDIITYNS 327
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 40/291 (13%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
FN ++ K A +++ G P +V+ T + YC + L ++
Sbjct: 13 FNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKIL 72
Query: 329 EKGCKPSVITYT-----------------------------------IVMHALGKAKQIN 353
+ G +P+ IT+T I+M+ L K +
Sbjct: 73 KMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETR 132
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
A+++ K + D YS++I L K V DA ++ +M +G+ PNV T++ ++
Sbjct: 133 AAMQMLRKTWVN---ADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILV 189
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM-KVLNFLLTHMFKNDV 472
+ C + + A+ LL M + KP+ TY ++ C ++ K LN + M + V
Sbjct: 190 DALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALN-IFNVMVQEGV 248
Query: 473 SMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ Y ++ GL + +++ A + F+EM K I P TY +L + L K
Sbjct: 249 EPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCK 299
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 57/120 (47%)
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P +L +N +++S + A+ L +++E + KP T L+ C + L +
Sbjct: 8 PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
LT + K ++ T+ +L++G+ +G+ A F + +++ G +Y +L L K
Sbjct: 68 LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127
>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
[Arabidopsis thaliana]
gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 606
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 165/362 (45%), Gaps = 39/362 (10%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++ L + G+ + A + MK YG + + + L+D K YK
Sbjct: 225 TFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVL 284
Query: 259 KDCIP--LSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
K+ + +S + FNILI G+ K + + K KEM Q P+V+SY I C
Sbjct: 285 KEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNG 344
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ +M G +P++ITY +++ K + EAL ++ +K +P T Y
Sbjct: 345 GKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMY 404
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA---------------- 418
+ LI K G++ D + E+M+++G+VP+V TYN +I+ C
Sbjct: 405 NMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTS 464
Query: 419 ------------------RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
+ E A LL++M + KP TY ++K C++ +K
Sbjct: 465 KGLPDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAA 524
Query: 461 NFLLTHMFK-NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ T M K + M+ +Y L++G + GKLE A EM+ KG+VP TY++++E
Sbjct: 525 TNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKE 584
Query: 520 KL 521
++
Sbjct: 585 EM 586
>gi|21537126|gb|AAM61467.1| unknown [Arabidopsis thaliana]
Length = 766
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 181/375 (48%), Gaps = 14/375 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ LG++ M +LV +MDE+ + T+ ++ L + R D+A+E F M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKI-RPDVVTLGILINTLSKSRRVDEALEVFEQM 355
Query: 224 KKYG------VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK---DCIPLSSQIFNILIH 274
+ ++ D+ + L+D L K ++ A ++ + K C+P ++ +N LI
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVP-NAVTYNCLID 414
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C+ K++ A++ + M + P+VV+ + CR +M+++G K
Sbjct: 415 GYCRAVKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V+TY ++HA + +A+ YEKM C PD Y +LI L + R DA +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
E +K+ G ++L YN +I C ++ E ++L ME++ KPD TY L+ +
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM-ISKGIVPYHST 513
K + + ++ M ++ + TY +++ G+L+ A F++M + + P
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 514 YKMLEEKLEKKRLGN 528
Y +L K LGN
Sbjct: 655 YNILINAFSK--LGN 667
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 162/323 (50%), Gaps = 16/323 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YN ++D ++ K E+V M DE+ V T++TI+ + R + AV F
Sbjct: 409 YNCLIDGYCRAVKLETAKEVVSRMKEDEIKPNVV---TVNTIVGGMCRHHGLNMAVVFFM 465
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHA---YKVFLEFKDCIPLSSQIFNILIHGWCK 278
M+K GV+ + L+ ++VE A Y+ LE C P ++I+ LI G C+
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE-AGCSP-DAKIYYALISGLCQ 523
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R+ DA + ++++ + GFS D+++Y I +C + + KV + L +M+++G KP IT
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSIT 583
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ GK K ++ E+M+ D P + Y ++I G + +A ++F+DM
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 399 KQGVV-PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
V PN + YN +I++ AL L ++M+ + +P+ ETY L K K +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 458 KVLNFLLTHMFK-----NDVSMD 475
+ L L+ M + N ++M+
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITME 726
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 177/389 (45%), Gaps = 53/389 (13%)
Query: 176 KFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRAL 235
K ++E+ KE N +++ ++R R G + +V + + K+++
Sbjct: 135 KLLRLYEIAKE----KNIPLTVVATKLLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVR 188
Query: 236 SVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQ--KAMK 290
+V++D L++ V+ A+KV L+ + P + +I++H K R + + + +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALIS 248
Query: 291 EMFQQGFSPDVVSYTCFIEHYC-----------------------------------REK 315
G SP+ V T FI C R
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM---KSDD---CLP 369
D +++D + +M E +P V+T I+++ L K+++++EAL+V+E+M ++DD
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLSKSRRVDEALEVFEQMRGKRTDDGNVIKA 368
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMK-KQGVVPNVLTYNTMISSACARSEEENALKL 428
D+ +++LI L K GR+K+A E+ MK ++ VPN +TYN +I C + E A ++
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCVPNAVTYNCLIDGYCRAVKLETAKEV 428
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+ +M+ED KP+ T ++ CR + + M K V + TY +L+
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKML 517
+E A ++E+M+ G P Y L
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 8/224 (3%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFN 270
R DA+ +K+ G D A ++L+ N+ E Y++ + K+ S +N
Sbjct: 526 RDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGKKPDSITYN 585
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI + K + + ++ M++M + G P V +Y I+ YC ++D+ LK ++
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC---SVGELDEALKLFKDM 642
Query: 331 G----CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
G P+ + Y I+++A K +AL + E+MK P+ Y++L L++ +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
+ ++ ++M +Q PN +T ++ E K +Q
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 89/202 (44%), Gaps = 6/202 (2%)
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+EK +V+ +++ G+ +N+++ VYE++ S+ + ++ + ++ +L + G V
Sbjct: 144 KEKNIPLTVVATKLLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVRNVVVDVLLRNGLV 201
Query: 388 KDANEIFEDMKKQGVV--PNVLTYNTMISSACARS--EEENALKLLQKMEEDLCKPDCET 443
DA ++ ++M ++ V PN +T + ++ EE + L+ + P+
Sbjct: 202 DDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALISRFSSHGVSPNSVW 261
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
+ C+ R +L+ + KN ++A + +L+ L + + +M
Sbjct: 262 LTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNMDISRMNDLVLKMD 321
Query: 504 SKGIVPYHSTYKMLEEKLEKKR 525
I P T +L L K R
Sbjct: 322 EVKIRPDVVTLGILINTLSKSR 343
>gi|242050034|ref|XP_002462761.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
gi|241926138|gb|EER99282.1| hypothetical protein SORBIDRAFT_02g031520 [Sorghum bicolor]
Length = 535
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 169/366 (46%), Gaps = 4/366 (1%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
L A FF P++Y +M+D+L K F L L+ EM E +S +
Sbjct: 115 LPEAAAFFRHIAASLPADSLPDLYASMIDLLAKHHHFSLARHLLDEMRE-RAVPISSRLI 173
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGV-EKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
++RR VR +A + FR M++YG + L+ L+ L K A +F +
Sbjct: 174 FALIRRYVRAEMPSEAADLFRRMEEYGSGAPEPATLASLLAALSKKRLASEAQALFDSCR 233
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
++ ++H WC+ ++D+A++ EM Q G P+V +YT I+ R +
Sbjct: 234 TVFTPDVVLYTAVVHAWCRAGQLDEAERVFAEMQQSGIMPNVYTYTAVIDAMYRAGQVPR 293
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI- 378
+ L +M + GC P+ T+ +M A KA + + L+V+ +M C PD Y+ LI
Sbjct: 294 AQELLCQMIDSGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMHQLRCEPDIITYNFLIE 353
Query: 379 -FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
G + A ++ + M + VP+ T+N M A KL +KM E C
Sbjct: 354 THCGKGQGNLDAALKVLDKMIAKKCVPDCHTFNPMFRLLVVLGNIGAAHKLYEKMRELQC 413
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KP+ TY LLK+ ++K M ++ + +M + + TYA+L+ G + A +
Sbjct: 414 KPNVVTYNCLLKLFNKEKSMDMVLRMKKNMDVEGIEPNMHTYAALIEAFCGRGNWKRAHA 473
Query: 498 FFEEMI 503
+EMI
Sbjct: 474 TLKEMI 479
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 110/250 (44%), Gaps = 44/250 (17%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGR 212
Q+G M Y ++D + ++ + EL+ +M +++G + AT + IMR V+ GR
Sbjct: 268 QSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQM--IDSGCPPNTATFNAIMRAHVKAGR 325
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDT------------------------------- 241
+ ++ M + E D + L++T
Sbjct: 326 SEQVLQVHNQMHQLRCEPDIITYNFLIETHCGKGQGNLDAALKVLDKMIAKKCVPDCHTF 385
Query: 242 ------LVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
LV ++ A+K++ + ++ C P + +N L+ + K + +D + K M
Sbjct: 386 NPMFRLLVVLGNIGAAHKLYEKMRELQCKP-NVVTYNCLLKLFNKEKSMDMVLRMKKNMD 444
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQI 352
+G P++ +Y IE +C ++++ TLKEM +EK KPS +V+ L KA Q+
Sbjct: 445 VEGIEPNMHTYAALIEAFCGRGNWKRAHATLKEMIEEKSFKPSKQVRDMVLVLLRKAGQL 504
Query: 353 NEALKVYEKM 362
+ ++ E M
Sbjct: 505 KKHEELVELM 514
>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
Length = 702
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/377 (24%), Positives = 178/377 (47%), Gaps = 3/377 (0%)
Query: 167 MVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKY 226
+V LG+ + ++ +L+ EM + + +T++ L R GRY+ A++ F +++
Sbjct: 59 VVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQLFAELRRQ 118
Query: 227 GVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDD 284
GV +V++D + G S + E + + + +I + +D
Sbjct: 119 GVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQ 178
Query: 285 AQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
A +++ +G P VV+Y ++ + + ++ + LKEM++ GC+P +TY +
Sbjct: 179 AVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAG 238
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
+A EA K + M S LP+T Y++++ + GRV +A +F+ MKK G VP
Sbjct: 239 TYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVP 298
Query: 405 NVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLL 464
NV TYN + +S L++L++M C P+ T+ +L +C ++ + +L
Sbjct: 299 NVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVL 358
Query: 465 THMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
M V + TY +L+ G A ++EMIS G P +TY L L ++
Sbjct: 359 NGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQ 418
Query: 525 R-LGNAKERINKLLAHA 540
A+ ++K+L +
Sbjct: 419 GDWSTAQSIVSKMLKNG 435
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 187/391 (47%), Gaps = 15/391 (3%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ GY+ YN + +LGK +F M E+++EM + + T +T++ + G
Sbjct: 293 KNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSR-SGCTPNRVTWNTMLAVCGKRGME 351
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-----FKDCIPLSSQI 268
D GMK GVE + L+ + S +A+K++ E F C+ + +
Sbjct: 352 DYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNAL 411
Query: 269 FNILIHGWCKTRKVD--DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
N+L +R+ D AQ + +M + GF P+ SY+ ++ Y + + ++ KE
Sbjct: 412 LNVL------SRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKE 465
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
+ PS + ++ A K +++ K ++++K+ PD ++S++ + +K G
Sbjct: 466 VYVGTIFPSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGL 525
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
A E+F+ +K+ G+ P+++TYN+++ +E A K+L++++ KPD +Y
Sbjct: 526 YSKATEMFDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNT 585
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++ C++ +K +L+ M + ++ TY +LV G A MI
Sbjct: 586 VINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHN 645
Query: 507 IVPYHSTY-KMLEEKLEKKRLGNAKERINKL 536
+ P TY ++++ + KR A+E ++++
Sbjct: 646 LKPMELTYRRVVDSYCKAKRYDEAREFLSEI 676
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 147/316 (46%), Gaps = 4/316 (1%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAF 220
+ YNT++ G+ +++ EM +++G+ L T + ++ L R G + A
Sbjct: 371 DTYNTLISAYGRCGSRTYAFKMYDEM--ISSGFTPCLTTYNALLNVLSRQGDWSTAQSIV 428
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKT 279
M K G + + ++ S+L+ KG + + E + I S I L+ K
Sbjct: 429 SKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKC 488
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
R+++ +KA +E+ QG+ PD+V + + Y + + K + +++ G P +ITY
Sbjct: 489 RRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITY 548
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+M K+ + EA K+ +++KS PD Y+++I K G +K+A I +M
Sbjct: 549 NSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIA 608
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G+ P V+TY+T++ + A +++ M KP TY ++ C+ KR
Sbjct: 609 DGMAPCVVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDE 668
Query: 460 LNFLLTHMFKNDVSMD 475
L+ + D + D
Sbjct: 669 AREFLSEISDTDQNFD 684
>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
Length = 653
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 102/391 (26%), Positives = 192/391 (49%), Gaps = 15/391 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM-STIMRRLVRGGRYDDAVEAFRG 222
+NT++ L ++ F + +++ +M +++G M +T++ + + G + A E
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQM--VDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDR 320
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M YG++ + + ++ L E A ++ E DC PL FNIL+ +C+
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDC-PLDDVTFNILVDFFCQNG 379
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V + +++M + G PDV++YT I +C+E + LK M GC+P+ I+YT
Sbjct: 380 LVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYT 439
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
IV+ L A++ +A + +M C P+ ++++I L K G V+ A E+ + M
Sbjct: 440 IVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLN 499
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P++++Y+T+I + + AL+LL M P+ Y+ + ++ R+
Sbjct: 500 GCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRIN-- 557
Query: 461 NFLLTHMFKN--DVSM--DAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ MF N DV++ DA Y +++ L + G + A F M+S G +P STY +
Sbjct: 558 --RVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTI 615
Query: 517 LEEKLEKKR-LGNAKERINKLLAHAKEQKTF 546
L L + + A+E + +L + +K F
Sbjct: 616 LIRGLASEGFVKEAQEMLTELCSKGALRKHF 646
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 178/382 (46%), Gaps = 13/382 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN MV ++ + L + N Y T ++R L GR DA+ M
Sbjct: 86 YNAMVSGYCRAGQLASARRLAASVPVPPNAY----TYFPVVRALCARGRIADALSVLDEM 141
Query: 224 KKYGVEKDTRALSVLMDTLVK---GNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWC- 277
++ G V+++ G A +V L + C L N++++ C
Sbjct: 142 RRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGC-ALDVGNCNLVLNAVCD 200
Query: 278 KTRKVDDAQKAMKEMFQQ-GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
+ VD+A + ++++ G PDVVSY ++ C K + +V D ++EM GC P+V
Sbjct: 201 QGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNV 260
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+T+ ++ L + +V +M C PD Y++++ + K G ++ A+EI +
Sbjct: 261 VTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDR 320
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M G+ PNV+ YNT++ C+ E A +LL +M ++ C D T+ L+ C+
Sbjct: 321 MPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGL 380
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+ + LL M ++ D TY +++ G + G ++ A + M + G P +Y +
Sbjct: 381 VYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTI 440
Query: 517 LEEKL-EKKRLGNAKERINKLL 537
+ + L +R +A++ +++++
Sbjct: 441 VLKGLCSAERWVDAEDLMSQMI 462
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/398 (22%), Positives = 165/398 (41%), Gaps = 79/398 (19%)
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGNSVEHAYKVFLEFKDCIPLSSQI--F 269
+ AV + + G D +++++ + +G SV+ A ++ + + +
Sbjct: 169 FRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSY 228
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
N ++ G C ++ Q M+EM + G P+VV++ I + CR F +V L +M +
Sbjct: 229 NAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVD 288
Query: 330 KGC-----------------------------------KPSVITYTIVMHALGKAKQINE 354
GC KP+V+ Y V+ L A++ +
Sbjct: 289 HGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQ 348
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A ++ +M +DC D ++ L+ + G V E+ E M + G VP+V+TY T+I+
Sbjct: 349 AEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVIN 408
Query: 415 SACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM----------------- 457
C + A+ LL+ M C+P+ +Y +LK C +R
Sbjct: 409 GFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSP 468
Query: 458 ------KVLNF------------LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
V+NF LL M N S D +Y++++ GL ++GK + A
Sbjct: 469 NPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELL 528
Query: 500 EEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
M++KG+ P Y + L K + RIN+++
Sbjct: 529 NVMVNKGMSPNTIIYSSIASALSK------EGRINRVI 560
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 156/329 (47%), Gaps = 37/329 (11%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
EMY+T++D L K + + L EM + + T ST++ G+ +A+
Sbjct: 448 EMYSTIIDALCKYQLVSEAYGLFSEM-TVKGISADVVTYSTLIYGFCIVGKLKEAIGLLN 506
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPL---------------- 264
M + D R ++L+D L K V+ A V + K C+
Sbjct: 507 EMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVY 566
Query: 265 ----SSQIFN---------------ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
+ +FN ILI+G+CK++ VD+A KEM Q+ PD V+Y+
Sbjct: 567 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYS 626
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
++ C+ V D + EM+++G VITY ++ L K +++A+ ++ KMK
Sbjct: 627 SLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQ 686
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
P+T ++ L+ L K GR+KDA E+F+D+ +G +V YN MI C + E A
Sbjct: 687 GIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEA 746
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
L +L KMEE+ C P+ T+ ++ +K
Sbjct: 747 LTMLSKMEENGCIPNAVTFDIIINALFKK 775
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 191/431 (44%), Gaps = 48/431 (11%)
Query: 145 FGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD----ELNNGY-VSLA 198
FGF AK + GY + NT++ K CL ++ K + L G+ ++
Sbjct: 360 FGFSVLAKILKRGYPPSTVTLNTLI------KGLCLKGQVKKALHFHDKLLAQGFQLNQV 413
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
+ +T++ + + G A++ R + + + S ++D L K V AY +F E
Sbjct: 414 SYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEM 473
Query: 259 K-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK-- 315
I ++ LI+G+C K+ +A + EM + +PDV +YT ++ +E
Sbjct: 474 TVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKV 533
Query: 316 ---------------------------------DFRKVDDTLKEMQEKGCKPSVITYTIV 342
+ +K M G P V TYTI+
Sbjct: 534 KEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTIL 593
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K+K ++EAL ++++M + +PDT YSSL+ L K+GR+ ++ ++M+ +G
Sbjct: 594 INGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQ 653
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+V+TYN++I C + A+ L KM++ +P+ T+ LL C+ R+K
Sbjct: 654 PADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQE 713
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLE 522
+ + +D Y ++ G + G LE A + +M G +P T+ ++ L
Sbjct: 714 VFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALF 773
Query: 523 KKRLGNAKERI 533
KK + E++
Sbjct: 774 KKDENDKAEKL 784
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 102/351 (29%), Positives = 167/351 (47%), Gaps = 3/351 (0%)
Query: 190 LNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
L GY S T++T+++ L G+ A+ + G + + + + L++ + K
Sbjct: 369 LKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT 428
Query: 249 EHAYKVFLEFKDCIPLSS-QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
A K+ + + + ++++ +I CK + V +A EM +G S DVV+Y+
Sbjct: 429 RGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 488
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I +C ++ L EM K P V TYTI++ ALGK ++ EA V M
Sbjct: 489 IYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACV 548
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
PD Y++L+ VK A +F M GV P+V TY +I+ C + AL
Sbjct: 549 KPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALN 608
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L ++M + PD TY+ L+ C+ R+ + L+ M D TY SL+ GL
Sbjct: 609 LFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLC 668
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLL 537
++G L+ A + F +M +GI P T+ +L + L K RL +A+E LL
Sbjct: 669 KNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLL 719
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 106/405 (26%), Positives = 176/405 (43%), Gaps = 38/405 (9%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
EMYNT++D L K + + L EM + ++ T ST++ G+ +A+
Sbjct: 134 EMYNTIIDALCKYQLVSEAYGLFSEM-TVKGISANVVTYSTLIYGFCIVGKLKEALGLLN 192
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTR 280
M + + ++L+D L K V+ A V + K C+ + ++ L+ G+
Sbjct: 193 VMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVY 252
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK---------------------DFRK 319
+V AQ M G +PDV SY I +C+ K F K
Sbjct: 253 EVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNK 312
Query: 320 VDDTLKEMQE-------------KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
+ D+ +M+ KG +P + T I+++ QI V K+
Sbjct: 313 ILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRG 372
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
P T ++LI L G+VK A + + QG N ++Y T+I+ C + A+
Sbjct: 373 YPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAI 432
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
KLL+K++ L KP+ E Y+ ++ C+ + + L + M +S D TY++L+ G
Sbjct: 433 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 492
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
GKL+ A EM+ K I P TY +L + L K+ G KE
Sbjct: 493 CIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKE--GKVKE 535
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 152/370 (41%), Gaps = 40/370 (10%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
TP++ YN M++ K K+ L KEM + + + + + I+ + Y AV
Sbjct: 270 TPDVHSYNIMINGFCKIKRVDKALNLFKEM--ILSRFPPIIQFNKILDSFAKMKHYSTAV 327
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGW 276
++ G++ D L++L++ + + V + K P S+ N LI G
Sbjct: 328 SLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGL 387
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
C +V A ++ QGF + VSY I C+ D R
Sbjct: 388 CLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG----------------- 430
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
A+K+ K+ P+ YS++I L K V +A +F +
Sbjct: 431 ------------------AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSE 472
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M +G+ +V+TY+T+I C + + A+ LL +M PD TY L+ ++ +
Sbjct: 473 MTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGK 532
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
+K +L M K V D TY +L+ G + +++ A F M G+ P TY +
Sbjct: 533 VKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTI 592
Query: 517 LEEKLEKKRL 526
L K ++
Sbjct: 593 LINGFCKSKM 602
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 121/267 (45%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P + N LI G C +V +A ++ QGF + VSY I CR D R
Sbjct: 60 PPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIK 119
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L+++ + KP+V Y ++ AL K + ++EA ++ +M + YS+LI+
Sbjct: 120 FLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFC 179
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
G++K+A + M + + PNV TYN ++ + C + + A +L M + K +
Sbjct: 180 IVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVI 239
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY+ L+ +K + M V+ D +Y ++ G + +++ A + F+EM
Sbjct: 240 TYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEM 299
Query: 503 ISKGIVPYHSTYKMLEEKLEKKRLGNA 529
I P K+L+ + K A
Sbjct: 300 ILSRFPPIIQFNKILDSFAKMKHYSTA 326
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 120/253 (47%), Gaps = 3/253 (1%)
Query: 280 RKVDDAQK--AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ VDDA + ++ ++G+ PD V+ I+ C + ++ ++ +G + + +
Sbjct: 40 QNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQV 99
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
+Y +++ + + A+K K+ P+ Y+++I L K V +A +F +M
Sbjct: 100 SYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEM 159
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+G+ NV+TY+T+I C + + AL LL M P+ TY L+ C++ ++
Sbjct: 160 TVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKV 219
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP-YHSTYKM 516
K +L M K V + TY++L+ G +++ A F M G+ P HS M
Sbjct: 220 KEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIM 279
Query: 517 LEEKLEKKRLGNA 529
+ + KR+ A
Sbjct: 280 INGFCKIKRVDKA 292
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 163/329 (49%), Gaps = 1/329 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ S ++ + G DA+E +R K++ +++ L+K + + +
Sbjct: 66 IYVFSGLITAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYE 125
Query: 257 EFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E +C P S FNIL+H +CK ++ AQ + + G P VVS+ + Y +
Sbjct: 126 ESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLG 185
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
D + MQ G +P V TY+++++ L K ++++A +++++M + +P++ ++
Sbjct: 186 DLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFT 245
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI K GRV A EI++ M Q + P+++TYNT+I C + + A L+ +M
Sbjct: 246 TLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMK 305
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
KPD TY L+ C++ ++ M K ++ +D Y +L+ GL + G+ A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDA 365
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
EM+S G+ P TY M+ + KK
Sbjct: 366 EKMLREMLSVGLKPEIGTYTMIINEFCKK 394
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 127/250 (50%), Gaps = 3/250 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M ++ G ++ M+ GV+ D SVL++ L K + ++ A ++F
Sbjct: 170 SVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELF 229
Query: 256 LEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E D +P +S F LI G CK +VD A + K+M Q SPD+++Y I C+
Sbjct: 230 DEMLDNGLVP-NSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 288
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D ++ D + EM KG KP ITYT ++ K + A + ++M ++ D
Sbjct: 289 NGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVA 348
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P + TY +I+ C + + KL+++M+
Sbjct: 349 YTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQ 408
Query: 434 EDLCKPDCET 443
D P T
Sbjct: 409 RDGYVPSVVT 418
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 132/276 (47%), Gaps = 1/276 (0%)
Query: 235 LSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
++LM + K + A VF K + S FN L++G+ K +++ + M
Sbjct: 139 FNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQ 198
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
G PDV +Y+ I C+E ++ EM + G P+ +++T ++ K +++
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVD 258
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
A+++Y++M S PD Y++LI+ L K G +K A ++ +M +G+ P+ +TY T+I
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLI 318
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+C + E A + ++M ++ + D Y L+ C++ R +L M +
Sbjct: 319 DGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ GTY ++ + G + +EM G VP
Sbjct: 379 PEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVP 414
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 167/359 (46%), Gaps = 15/359 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN M+ S ++ L++EM E ++ T + ++ V+ G++ +A E + M
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLE-RKISPNVVTYNALINAFVKEGKFFEAAELYDEM 349
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G+ +T + ++D K + ++ A +F + K C P F LI G+C ++
Sbjct: 350 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP-DVFTFTTLIDGYCGAKR 408
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DD + + EM ++G + V+Y I +C D D ++M G P ++T
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468
Query: 342 VMHAL---GKAKQINEALKVYEKMKSD--------DCLPDTSFYSSLIFILSKAGRVKDA 390
++ L GK K E K +K K D PD Y+ LI L G+ +A
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 528
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E++E+M +G+VP+ +TY++MI C +S + A ++ M P+ T+ L+
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING 588
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ R+ L M + + DA Y +L+ G + G + A F+EMIS G+ P
Sbjct: 589 YCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP 647
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 167/347 (48%), Gaps = 14/347 (4%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYG-VEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T T + + + G A+ R M++ ++ + S ++D L K ++ +F+E
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278
Query: 258 FKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+D I + +N +I G+C + + AQ+ ++EM ++ SP+VV+Y I + +E
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
F + + EM +G P+ ITY ++ K +++ A ++ M + C PD +++
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI A R+ D E+ +M ++G+V N +TYNT+I C + AL L Q+M
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG-----------TYASLVRG 485
PD T LL C ++K + M K+ + +DA TY L+ G
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTY-KMLEEKLEKKRLGNAKE 531
LI GK A +EEM +GIVP TY M++ ++ RL A +
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 155/353 (43%), Gaps = 40/353 (11%)
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
A+ F + K G+ D + L+ L + V A +F + C P F L++G
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI--CRP-DVLTFTTLMNG 191
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD-------FRKVDDT----- 323
C+ +V +A + M + G PD ++Y F++ C+ D RK+++
Sbjct: 192 LCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKP 251
Query: 324 ------------------------LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
EMQ+KG P+++TY ++ + + + A ++
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
++M P+ Y++LI K G+ +A E++++M +G++PN +TYN+MI C +
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ A + M C PD T+ L+ C KR+ LL M + + + TY
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
+L+ G G L A ++MIS G+ P T L + L + +L +A E
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 484
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 150/333 (45%), Gaps = 43/333 (12%)
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
+KG +E A +F + PL S I FN L+ + + D ++M ++ D+
Sbjct: 59 IKG--LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDI 116
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
S+T I+ +C T ++ + G P V+T+T ++H L +++EAL ++ +
Sbjct: 117 YSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQ 176
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
+ C PD +++L+ L + GRV +A + + M + G+ P+ +TY T + C +
Sbjct: 177 I----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232
Query: 422 EENALKLLQKMEE----------------DLCK--------------------PDCETYA 445
+AL LL+KMEE LCK P+ TY
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
++ C R LL M + +S + TY +L+ ++ GK A ++EM+ +
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
GI+P TY + + K+ +A E + L+A
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS------LATMSTIMRRLVR 209
G + YNT++ FCL+ +L +D L+ +S + T +T++ L
Sbjct: 423 GLVANTVTYNTLI------HGFCLVGDLNAALD-LSQQMISSGVCPDIVTCNTLLDGLCD 475
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF 269
G+ DA+E F+ M+K ++ D H + + + +
Sbjct: 476 NGKLKDALEMFKAMQKSKMDLDA----------------SHPF-------NGVEPDVLTY 512
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
NILI G K +A++ +EM +G PD ++Y+ I+ C++ + M
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
K P+V+T+ +++ KA ++++ L+++ +M + D Y +LI+ K G +
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
A +IF++M GV P+ +T M++ ++ E E A+ +L+ ++
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
>gi|302808451|ref|XP_002985920.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
gi|300146427|gb|EFJ13097.1| hypothetical protein SELMODRAFT_123132 [Selaginella moellendorffii]
Length = 574
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 174/364 (47%), Gaps = 14/364 (3%)
Query: 97 VDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTG 156
V ++ IL+ Q+ D+ V AL G S++ V + L++ + A+ FF WA+ Q G
Sbjct: 5 VARVCGILN-QHGWGDETVRALAGLNASLNAYQVNEILKQ-QKEAGVAYNFFIWARKQAG 62
Query: 157 YMHTPEMYNTMVDVLGKSKKF----CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
+ H Y T++ +LG++K F L+ E+++E E N + T + ++ R
Sbjct: 63 FKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPN-----VVTYNRLIHCYGRAND 117
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNI 271
D +++ F M+ G E D L+D K + A +++ + + + ++I
Sbjct: 118 LDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSI 177
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+IH K K++ A K EM +G++P +V+Y I+ + + F ++QE G
Sbjct: 178 IIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVG 237
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P +TY I+M LG I +A +V+E+M+ + D + ++ + K G + A
Sbjct: 238 YAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKTGNAEKAA 297
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ F M G+ PNV N+++S+ S + A +L M + P +TY LL C
Sbjct: 298 QWFNRMLDSGLQPNVPACNSLLSAYLRSSFYDAAGGVLGGMAKWGLYPTLQTYTSLLSSC 357
Query: 452 --CR 453
CR
Sbjct: 358 AACR 361
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 121/247 (48%), Gaps = 5/247 (2%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
Q GF DV +YT + R K F +++ L EM +GC+P+V+TY ++H G+A ++
Sbjct: 60 QAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDLD 119
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
+LK++ M+ C PD Y +LI + +KAG A E++ M+ G P+ TY+ +I
Sbjct: 120 SSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSIII 179
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+ A KL +M + P TY ++ + + + + L + + + +
Sbjct: 180 HCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGYA 239
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK--- 530
D TY ++ L G +E A FEEM G V + + ++ + K GNA+
Sbjct: 240 PDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVDMWGKT--GNAEKAA 297
Query: 531 ERINKLL 537
+ N++L
Sbjct: 298 QWFNRML 304
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 120/265 (45%), Gaps = 10/265 (3%)
Query: 251 AYKVFL------EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
AY F+ FK + + I IL + + D + EM ++G P+VV+Y
Sbjct: 50 AYNFFIWARKQAGFKHDVHTYTTILGIL----GRAKSFDVLNNLLDEMIREGCEPNVVTY 105
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
I Y R D MQ GC+P +TY ++ KA + A+++Y +M+
Sbjct: 106 NRLIHCYGRANDLDSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQH 165
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
PDT YS +I L KAG++ A ++F +M +G P+++TYN +I + +
Sbjct: 166 AGFRPDTFTYSIIIHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDM 225
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
ALKL ++E PD TY ++++ ++ + M + D + +V
Sbjct: 226 ALKLYSDLQEVGYAPDRVTYGIIMEVLGNCGHIEDAEQVFEEMERAGWVADNPIFGLMVD 285
Query: 485 GLIESGKLELACSFFEEMISKGIVP 509
++G E A +F M+ G+ P
Sbjct: 286 MWGKTGNAEKAAQWFNRMLDSGLQP 310
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 91/194 (46%)
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++ G K V TYT ++ LG+AK + + ++M + C P+ Y+ LI +A +
Sbjct: 59 KQAGFKHDVHTYTTILGILGRAKSFDVLNNLLDEMIREGCEPNVVTYNRLIHCYGRANDL 118
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+ ++F M+ G P+ +TY T+I + A++L ++M+ +PD TY+ +
Sbjct: 119 DSSLKLFNVMQMVGCEPDRVTYCTLIDLQAKAGFHDAAMELYRQMQHAGFRPDTFTYSII 178
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + ++ L M + TY ++ ++GK ++A + ++ G
Sbjct: 179 IHCLGKAGKLNAAYKLFCEMTDRGYAPSLVTYNIIIDLHAKAGKFDMALKLYSDLQEVGY 238
Query: 508 VPYHSTYKMLEEKL 521
P TY ++ E L
Sbjct: 239 APDRVTYGIIMEVL 252
>gi|259490098|ref|NP_001159276.1| uncharacterized protein LOC100304366 [Zea mays]
gi|223943161|gb|ACN25664.1| unknown [Zea mays]
gi|414590092|tpg|DAA40663.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
gi|414590093|tpg|DAA40664.1| TPA: hypothetical protein ZEAMMB73_658820 [Zea mays]
Length = 535
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/366 (27%), Positives = 168/366 (45%), Gaps = 4/366 (1%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATM 200
L A FF P++Y +M+ +L K + F L L+ EM E +S +
Sbjct: 115 LPEAVAFFHHVSPSLPADSLPDLYASMIVLLAKHRHFGLARHLLDEMRE-RAVPISRQLI 173
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGV-EKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
+ RR VR +A + FR M++YG D L+ L+ L K A +F +
Sbjct: 174 LALTRRYVRAEMPSEAADLFRRMEEYGAGAPDPATLASLLAALSKKRLASEAQALFDSCR 233
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
++ ++H WC+ ++D+A++ EM Q G P+V +YT I+ R +
Sbjct: 234 TVFTPDVVLYTAVVHAWCRAGRLDEAERVFTEMQQSGIMPNVYTYTAVIDAMYRAGQVPR 293
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI- 378
+ L +M + GC P+ T+ +M + KA + + L+V+ +M+ C PD Y+ LI
Sbjct: 294 AQELLCQMIDSGCPPNTTTFNAIMRSHVKAGRSEQVLQVHNQMQQLRCEPDVITYNFLIE 353
Query: 379 -FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
G + A ++ + M + VP+ T+N M A KL +KM E C
Sbjct: 354 THCGKGQGNLDAALKVLDKMTAKKCVPDCHTFNPMFRLLLVLGNIGAAHKLYEKMRELQC 413
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KP+ TY LL++ ++K M ++ + M + + TYA+L+ G + A +
Sbjct: 414 KPNVVTYNCLLRLFNKEKSMDMVLRMKKDMDAEGIEPNMHTYAALIEAFCGRGNWKRAHT 473
Query: 498 FFEEMI 503
+EMI
Sbjct: 474 TLKEMI 479
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 120/269 (44%), Gaps = 49/269 (18%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGR 212
Q+G M Y ++D + ++ + EL+ +M +++G + T + IMR V+ GR
Sbjct: 268 QSGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQM--IDSGCPPNTTTFNAIMRSHVKAGR 325
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDT------------------------------- 241
+ ++ M++ E D + L++T
Sbjct: 326 SEQVLQVHNQMQQLRCEPDVITYNFLIETHCGKGQGNLDAALKVLDKMTAKKCVPDCHTF 385
Query: 242 -------LVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEM 292
LV GN + A+K++ + ++ C P + +N L+ + K + +D + K+M
Sbjct: 386 NPMFRLLLVLGN-IGAAHKLYEKMRELQCKP-NVVTYNCLLRLFNKEKSMDMVLRMKKDM 443
Query: 293 FQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM-QEKGCKPSVITYTIVMHALGKAKQ 351
+G P++ +Y IE +C ++++ TLKEM +EK KPS +V+ L KA Q
Sbjct: 444 DAEGIEPNMHTYAALIEAFCGRGNWKRAHTTLKEMIEEKSFKPSKQVRDMVLVLLRKAGQ 503
Query: 352 INEALKVYEKMKSDDCL---PDTSFYSSL 377
+ + ++ E M + P+ + +S+L
Sbjct: 504 LKKHEELVELMVDRGFISQPPNDALWSAL 532
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 168/366 (45%), Gaps = 8/366 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELN---NGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
+N ++ + K K + L +MD N Y T+ ++ R A
Sbjct: 64 FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIY----TLHILINSFCHLNRVGFAFSVL 119
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKT 279
+ K G + DT + L+ + + A +F + + + LI+G CK
Sbjct: 120 AKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 179
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
A + + M Q+ P+V +Y I+ C+++ + + EM KG P + TY
Sbjct: 180 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 239
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
++HAL + + +M +PD +++++ L K G+V +A+++ + M +
Sbjct: 240 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 299
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+GV PNV+TY ++ C SE + A+K+ M C P+ +Y L+ C+ +R+
Sbjct: 300 RGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDK 359
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+L M + ++ D TY++L+ GL +L+ A + F EM++ +P TY++L +
Sbjct: 360 AMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLD 419
Query: 520 KLEKKR 525
L K R
Sbjct: 420 YLCKNR 425
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 160/332 (48%), Gaps = 3/332 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T T++ L + G A+ M + + + A + ++D+L K V A+ +F
Sbjct: 166 VVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFS 225
Query: 257 EFKDCIPLSSQIF--NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E +S IF N LIH C + + EM PDVVS+ ++ C+E
Sbjct: 226 EMVT-KGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ D + +M ++G +P+V+TYT +M +++EA+KV++ M C+P+ Y
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++LI K R+ A +F +M +Q ++P+ +TY+T+I C ++A+ L +M
Sbjct: 345 NTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVA 404
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
P+ TY LL C+ + + LL + +++ D + G+ +G+LE
Sbjct: 405 CSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEA 464
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
A F + SKG+ P TY ++ L ++ L
Sbjct: 465 ARDLFSNLSSKGLQPDVWTYSIMINGLCRRGL 496
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 159/344 (46%), Gaps = 2/344 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+++ L K L+ M + N ++ +TI+ L + + +A F M
Sbjct: 169 YGTLINGLCKVGNTSAAIRLLGSMVQ-KNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
G+ D + L+ L +H + E D + + FN ++ CK KV
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A + +M Q+G P+VV+YT ++ +C + + M KGC P+VI+Y +
Sbjct: 288 TEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTL 347
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
++ K ++I++A+ ++ +M + +PDT YS+LI L R++DA +F +M
Sbjct: 348 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 407
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
+PN++TY ++ C A+ LL+ +E PD + + CR ++
Sbjct: 408 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 467
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L +++ + D TY+ ++ GL G L+ A F EM G
Sbjct: 468 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENG 511
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 80/372 (21%), Positives = 164/372 (44%), Gaps = 4/372 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT++D L K ++ + L EM + G + T ++++ L +
Sbjct: 204 YNTIIDSLCKDRQVTEAFNLFSEM--VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNE 261
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M + D + + ++D L K V A+ V + + + + + L+ G C +
Sbjct: 262 MVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSE 321
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A K M +G P+V+SY I YC+ + K EM + P +TY+
Sbjct: 322 MDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYST 381
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++H L +++ +A+ ++ +M + +P+ Y L+ L K + +A + + ++
Sbjct: 382 LIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSN 441
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+ P++ N I C E E A L + +PD TY+ ++ CR+ + +
Sbjct: 442 LDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEAS 501
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L M +N +++ Y ++ RG + + + A +EM+++G ST + + L
Sbjct: 502 KLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 561
Query: 522 EKKRLGNAKERI 533
L + ++I
Sbjct: 562 SDDGLDQSLKQI 573
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 109/255 (42%)
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
P S+ FN L+ K + +M G P++ + I +C
Sbjct: 58 PPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFS 117
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L ++ + G +P T+T ++ + +I EAL +++KM + PD Y +LI L
Sbjct: 118 VLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLC 177
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K G A + M ++ PNV YNT+I S C + A L +M PD
Sbjct: 178 KVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIF 237
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ C K + LL M + + D ++ ++V L + GK+ A ++M
Sbjct: 238 TYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKM 297
Query: 503 ISKGIVPYHSTYKML 517
I +G+ P TY L
Sbjct: 298 IQRGVEPNVVTYTAL 312
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/262 (21%), Positives = 120/262 (45%), Gaps = 1/262 (0%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A + M + P V + + + K + +M G P++ T I
Sbjct: 42 IDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHI 101
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++++ ++ A V K+ PDT+ +++LI + G++ +A +F+ M +G
Sbjct: 102 LINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG 161
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+V+TY T+I+ C A++LL M + C+P+ Y ++ C+ +++
Sbjct: 162 FRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAF 221
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
L + M +S D TY SL+ L + + + EM+ I+P ++ + + L
Sbjct: 222 NLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDAL 281
Query: 522 EKK-RLGNAKERINKLLAHAKE 542
K+ ++ A + ++K++ E
Sbjct: 282 CKEGKVTEAHDVVDKMIQRGVE 303
>gi|297849070|ref|XP_002892416.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338258|gb|EFH68675.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 459
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/365 (26%), Positives = 171/365 (46%), Gaps = 2/365 (0%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ H Y++++ L KS+ F + ++++ + N + +++ + G
Sbjct: 74 EMGFRHDYPSYSSLIYKLAKSRNFDAVDQILR-LVRYRNVRCRESLFMALIQHYGKAGWV 132
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNIL 272
D AV+ F + + + ++L+ L++ LV +E A F KD + +S FNIL
Sbjct: 133 DKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFFDGAKDMRLRPNSVSFNIL 192
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
I G+ + A K EM + P VV+Y I CR D K L++M +K
Sbjct: 193 IKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNNDMGKATSLLEDMIKKRI 252
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+P+ +T+ ++M L + NEA K+ M+ C P Y L+ L K G++ +A
Sbjct: 253 RPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYGVLMSDLGKRGKIDEAKI 312
Query: 393 IFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
+ +MKK+ + P+ + YN +++ C A + L +M+ CKP+ TY ++ C
Sbjct: 313 LLGEMKKRRIKPDFVIYNILVNHLCTEGRVPEAYRTLTEMQMKGCKPNAATYRMIVDGFC 372
Query: 453 RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHS 512
R +L M + S T+ +V GLI+ G L+ AC E M K + +S
Sbjct: 373 RIGDFDSGLNVLNAMLASRHSPTPATFVRMVSGLIKGGNLDHACFVLEVMGKKKLSFGYS 432
Query: 513 TYKML 517
++ L
Sbjct: 433 AWQNL 437
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 119/249 (47%), Gaps = 5/249 (2%)
Query: 280 RKVDDAQKAMKEMFQQ----GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
++++D ++A+ +F Q GF D SY+ I + ++F VD L+ ++ + +
Sbjct: 57 KEIEDPEEAL-SLFHQYQEMGFRHDYPSYSSLIYKLAKSRNFDAVDQILRLVRYRNVRCR 115
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ ++ GKA +++A+ V+ K+ S DC+ ++LI +L G ++ A F+
Sbjct: 116 ESLFMALIQHYGKAGWVDKAVDVFHKLTSFDCVRTIQSLNTLINVLVDNGELEKAKSFFD 175
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
K + PN +++N +I + + E A K+ +M E +P TY L+ CR
Sbjct: 176 GAKDMRLRPNSVSFNILIKGFLDKCDWEAACKVFDEMLEMEVQPSVVTYNSLIGFLCRNN 235
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
M LL M K + +A T+ L++GL +G+ A +M +G P Y
Sbjct: 236 DMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLMFDMEYRGCKPGLVNYG 295
Query: 516 MLEEKLEKK 524
+L L K+
Sbjct: 296 VLMSDLGKR 304
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 95/226 (42%), Gaps = 3/226 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T ++++ L R A M K + + +LM L A K+
Sbjct: 220 SVVTYNSLIGFLCRNNDMGKATSLLEDMIKKRIRPNAVTFGLLMKGLCCNGEYNEAKKLM 279
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+E++ C P + +L+ K K+D+A+ + EM ++ PD V Y + H C
Sbjct: 280 FDMEYRGCKPGLVN-YGVLMSDLGKRGKIDEAKILLGEMKKRRIKPDFVIYNILVNHLCT 338
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E + TL EMQ KGCKP+ TY +++ + + L V M + P +
Sbjct: 339 EGRVPEAYRTLTEMQMKGCKPNAATYRMIVDGFCRIGDFDSGLNVLNAMLASRHSPTPAT 398
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
+ ++ L K G + A + E M K+ + + ++ C +
Sbjct: 399 FVRMVSGLIKGGNLDHACFVLEVMGKKKLSFGYSAWQNLLCDLCIK 444
>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
Length = 454
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 93/325 (28%), Positives = 165/325 (50%), Gaps = 7/325 (2%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV-KGNSVEHAYKVF 255
+ T +++M L + G+ +A + F M K G++ D L+ KG VE +
Sbjct: 112 VVTYNSLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLA 171
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
L ++ + L +FNILI + K KVD+ +M QQG +P+ V+Y I+ C+
Sbjct: 172 LMVQNGMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCK-- 229
Query: 316 DFRKVDDTL---KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
++DD + ++M +KG P+V+ YT ++HAL + +A ++ ++ P+
Sbjct: 230 -LGRLDDAMLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIV 288
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
F+++++ L K GRV ++ ++F+ + GV P+V+TY+T+I C + + A+KLL M
Sbjct: 289 FFNTILDSLCKEGRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGM 348
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
KPD TY+ L+ C+ RM+ L M N V+ D TY ++ GL + +
Sbjct: 349 VSVGLKPDSVTYSTLINGYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRT 408
Query: 493 ELACSFFEEMISKGIVPYHSTYKML 517
A + + G STY ++
Sbjct: 409 AAAKELYARITESGTQLELSTYNII 433
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 101/399 (25%), Positives = 175/399 (43%), Gaps = 18/399 (4%)
Query: 146 GFFTWAKTQTGYMHTPEM-----------YNTMVDVLGKSKKFCLMWELVKEMDELNNGY 194
G F Y+ EM YN+++ L K++ E++ M N
Sbjct: 20 GLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLTVMVMPN--- 76
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
T ++IM G+ + A+ FR M G+E D + LMD L K A K+
Sbjct: 77 --CFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEARKI 134
Query: 255 FLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
F K + + L+HG+ + + + M Q G D + I Y +
Sbjct: 135 FDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAYTK 194
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
++ +V +M+++G P+ + Y V+ L K ++++A+ +E+M P+
Sbjct: 195 QEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPNVVV 254
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+SLI L + + A E+ ++ QG+ PN++ +NT++ S C + KL +
Sbjct: 255 YTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFDLLG 314
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
PD TY+ L+ C +M LLT M + D+ TY++L+ G + ++E
Sbjct: 315 HIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKINRME 374
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
A + F+EM S G+ P TY ++ L +R AKE
Sbjct: 375 DALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKE 413
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 113/232 (48%), Gaps = 5/232 (2%)
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PDVVSY I+ +E D K T EM ++ P +TY ++ AL KA+ ++ A++V
Sbjct: 9 PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
M +P+ Y+S++ +G+ + A IF M G+ P+V+TYN+++ C
Sbjct: 69 LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
+ A K+ M + KPD TY LL K + ++ LL M +N + +D
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNA 529
+ L+ + K++ F +M +G+ P Y+ + + L K RL +A
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 103/226 (45%), Gaps = 11/226 (4%)
Query: 327 MQEKG-CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
M + G C P V++Y ++ L K +++A Y +M PD Y+S+I LSKA
Sbjct: 1 MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+ A E+ M V+PN TYN+++ C+ + E A+ + +KM D +PD TY
Sbjct: 61 AMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ C+ + + M K + D TY +L+ G G L M+
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176
Query: 506 GIVPYHSTYKML------EEKLEKKRLGNAKERINKLLAHAKEQKT 545
G+ H + +L +EK+++ L +K R L +A +T
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRT 222
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/312 (21%), Positives = 135/312 (43%), Gaps = 9/312 (2%)
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAM 289
D + + ++D L K V+ AY + E D + + +N +I K + +D A + +
Sbjct: 10 DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL 69
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
M P+ +Y + YC K ++M G +P V+TY +M L K
Sbjct: 70 TVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKN 125
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+ EA K+++ M PD + Y +L+ + G + + +++ M + G+ + +
Sbjct: 126 GKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVF 185
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM--KVLNFLLTHM 467
N +I + + + + + + KM + P+ Y ++ C+ R+ +LNF M
Sbjct: 186 NILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNF--EQM 243
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLG 527
++ + Y SL+ L K E A E++ +GI P + + + L K+
Sbjct: 244 IDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRV 303
Query: 528 NAKERINKLLAH 539
+++ LL H
Sbjct: 304 IESKKLFDLLGH 315
>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 825
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 99/348 (28%), Positives = 158/348 (45%), Gaps = 4/348 (1%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+ +++ L GR DDA F M + +VL+D L K V A + E
Sbjct: 165 TILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVN 224
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
K +P + +N LI G C+ + DD K +++M Q SPD +YT + C+
Sbjct: 225 KGVVP-NVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVG 283
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
L E KG V+TY +++ K + AL V + MK + P ++ +I
Sbjct: 284 HGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVI 343
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
G+V A M G+ PN +T+N++IS C+ E + AL+LL MEE
Sbjct: 344 HGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVL 403
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PD +TYA + C + +++ + L + + + Y SLV G + G ++ A
Sbjct: 404 PDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGL 463
Query: 499 FEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHAKEQKT 545
E+M S+ +P TY L + L K KRL A + ++K+ E T
Sbjct: 464 MEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTT 511
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 148/304 (48%), Gaps = 8/304 (2%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE----FKDCIPLSSQIFNILIHGWCK 278
M++ G+ DT + LM L + + A +F++ + C S + ILI G C
Sbjct: 116 MREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYS--YTILIKGLCA 173
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
++DDA + +M + P V +YT ++ C+ + + + L EM KG P+V+T
Sbjct: 174 AGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVT 233
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ L + + ++ K+ EKM+ PD Y+ ++ L K G+V ++ +
Sbjct: 234 YNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAI 293
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK-MCCRKKRM 457
+GV VLTYN +I+ C + + AL +LQ M+ + P +T+ ++ CC K
Sbjct: 294 GKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVH 353
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
K + F LT M +S + T+ SL+ G G+ ++A + M G++P TY +
Sbjct: 354 KAMAF-LTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIF 412
Query: 518 EEKL 521
+ L
Sbjct: 413 IDAL 416
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 170/374 (45%), Gaps = 11/374 (2%)
Query: 149 TWAKTQTGY----MHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTI 203
+AK G+ +HT Y ++D L K ++ L+ EM +N G V ++ T + +
Sbjct: 183 VFAKMSRGWCRPGVHT---YTVLLDGLCKVRRVGEAEALLGEM--VNKGVVPNVVTYNAL 237
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCI 262
+ L + GR+DD + M+ D + ++ L K V H KV E +
Sbjct: 238 IGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGV 297
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
L +N LI+G+CK + A ++ M + +P V ++ I +C K
Sbjct: 298 ALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMA 357
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
L +M G P+ +T+ ++ + AL++ + M+ LPD Y+ I L
Sbjct: 358 FLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALC 417
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
G++++A+ +F + +G+ + + Y +++ C + ++A L++KM + C PD
Sbjct: 418 DEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVH 477
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ C+ KR+ LL M K + T+ L++ ++ K A +E+M
Sbjct: 478 TYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQM 537
Query: 503 ISKGIVPYHSTYKM 516
IS G P TY +
Sbjct: 538 ISSGCKPDKQTYTL 551
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 140/292 (47%), Gaps = 25/292 (8%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS-----SQIFNILIHGWC 277
M++YGV D + ++ +D L +E A+ +F C+P+ + I+ L+HG+C
Sbjct: 397 MEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLF----SCLPMKGIKAHNVIYTSLVHGYC 452
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ +D A M++M + PDV +Y I+ C+ K + D L +M+++G +P+
Sbjct: 453 QVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTC 512
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN--EIFE 395
T+ I++ + K+ +A K+YE+M S C PD Y+ I G K+ N
Sbjct: 513 TFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV 572
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK- 454
+M + GV P+V TYN +I + +E A KM PDC TY+ LL C K
Sbjct: 573 EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKD 632
Query: 455 -----------KRMKVLNF--LLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
K + V N L M ++D + TY +L+RGL +LE
Sbjct: 633 DSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLE 684
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 74/258 (28%), Positives = 122/258 (47%), Gaps = 1/258 (0%)
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
K P + +N LI+ CK + DA+ A+ M + G +PD +Y C + CR
Sbjct: 82 LKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLL 141
Query: 318 RKVDDTLKEMQEK-GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
+M + G +YTI++ L A +I++A +V+ KM C P Y+
Sbjct: 142 AAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTV 201
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ L K RV +A + +M +GVVPNV+TYN +I C ++ KLL+KME
Sbjct: 202 LLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQR 261
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
PDC TY ++ C+ ++ +L V+++ TY +L+ G + G ++ A
Sbjct: 262 HSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAAL 321
Query: 497 SFFEEMISKGIVPYHSTY 514
+ M + P T+
Sbjct: 322 DVLQLMKRNRVNPGVQTF 339
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 1/181 (0%)
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+ M + G P+ TY +++A K + +A +M+ PDT Y+ L+ L
Sbjct: 77 SFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLC 136
Query: 383 KAGRVKDANEIFEDM-KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
+AG + A +F M ++ G + +Y +I CA ++A ++ KM C+P
Sbjct: 137 RAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGV 196
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY LL C+ +R+ LL M V + TY +L+ GL + G+ + E+
Sbjct: 197 HTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEK 256
Query: 502 M 502
M
Sbjct: 257 M 257
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
S+A R+ F M K G PN TYNT+I++ C + +A L +M E PD
Sbjct: 66 SRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDT 125
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKN-DVSMDAGTYASLVRGLIESGKLELACSFFE 500
TY L+ CR + L M + D +Y L++GL +G+++ AC F
Sbjct: 126 FTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFA 185
Query: 501 EMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLL 537
+M P TY +L + L K +R+G A+ + +++
Sbjct: 186 KMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMV 223
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 76/360 (21%), Positives = 135/360 (37%), Gaps = 76/360 (21%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T +T++ L + R D A++ MKK G+E T ++L+ ++ A K++ +
Sbjct: 478 TYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQM 537
Query: 259 --KDCIPLSSQIFNILI-----HGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHY 311
C P Q + + I G K +D A+ EM + G PDV +Y I+ Y
Sbjct: 538 ISSGCKP-DKQTYTLKISTDWFEGATKEENID---MAVVEMHEAGVFPDVETYNAIIKAY 593
Query: 312 CREKDFRKVDDTLKE--------MQEKGCKPSVITYTIVMH--------------ALGKA 349
VD LKE M P TY+I+++ + K
Sbjct: 594 --------VDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDAFDNEKIWKM 645
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+ +++E+M D P S Y +L+ L R+++ + M+ ++ +
Sbjct: 646 VDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMS 705
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
+ ++ C A + + M +++ P LK CC
Sbjct: 706 DYLLGCYCNLEMYREACEQFRSMAH-------QSFQPGLKSCCL---------------- 742
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNA 529
L+ GL +SG +A S F +M+ G +K+L + L +K A
Sbjct: 743 ------------LLSGLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGA 790
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 137/367 (37%), Gaps = 19/367 (5%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA 198
D+ AFG ++ M YNT++D L K K+ +L+ +M + +
Sbjct: 455 GDIDSAFGLMEKMASEN-CMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKK-QGIEPTTC 512
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD--TRALSVLMDTLVKGNSVEHAYKVFL 256
T + ++++++ ++ DA + + M G + D T L + D E+ +
Sbjct: 513 TFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVV 572
Query: 257 EFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E + + + +N +I + + A A +M PD +Y+ + + C +
Sbjct: 573 EMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKD 632
Query: 316 D--------------FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
D R + + ++M E P + TY ++ L ++ E + K
Sbjct: 633 DSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLK 692
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
M+ + L D L+ ++A E F M Q P + + ++S C +
Sbjct: 693 MQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGD 752
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYAS 481
A+ + M D + L+ K +L+ M TYAS
Sbjct: 753 HGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYAS 812
Query: 482 LVRGLIE 488
LVR + E
Sbjct: 813 LVRLVAE 819
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 163/332 (49%), Gaps = 7/332 (2%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMK--KYGVEKDT--RALSVLMDTLVKGNSVEHAY 252
+ S ++ + G DA+E +R + K+ V DT + L LM L V Y
Sbjct: 54 IYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCRKVLEHLM-KLKYFKLVWGFY 112
Query: 253 KVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
K LE P S FNIL+H +CK R + AQ + + G P VVSY + Y
Sbjct: 113 KEILE--SGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
R D + M G +P V TY+++++ L K ++++A +++++M +P+
Sbjct: 171 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 230
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
+++LI K GRV A EI++ M Q ++P+++TYNT+I C + + + A L+ +M
Sbjct: 231 TFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 290
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
KPD TY L+ CC++ + M + ++ +D Y +L+ GL + G+
Sbjct: 291 SMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 350
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
A EM+S G+ P TY M+ + KK
Sbjct: 351 VDAEKMLREMLSVGLKPDARTYTMIINEFCKK 382
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 121/238 (50%), Gaps = 3/238 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K + ++ A ++F
Sbjct: 158 SVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 217
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K +P + F LI G CK +VD A + K+M Q PD+++Y I C+
Sbjct: 218 DEMLVKGLVP-NGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCK 276
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ D + EM KG KP ITYT ++ K ++ A + ++M ++ D
Sbjct: 277 KGDLKQAHDLIDEMSMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 336
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
Y++LI L + GR DA ++ +M G+ P+ TY +I+ C + + KLL++
Sbjct: 337 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKE 394
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 144/321 (44%), Gaps = 37/321 (11%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W KE+ L +GY SL + +M R + E
Sbjct: 99 LMKLKYFKLVWGFYKEI--LESGYPASLYFFNILMHRFCK-------------------E 137
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+D R + D + K + S +N L++G+ + +D+ +
Sbjct: 138 RDIRVAQSVFDAITKWG---------------LRPSVVSYNTLMNGYIRLGDLDEGFRLK 182
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
M G PDV +Y+ I C+E ++ EM KG P+ +T+T ++ K
Sbjct: 183 SAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKN 242
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+++ AL++Y++M S LPD Y++LI+ L K G +K A+++ ++M +G+ P+ +TY
Sbjct: 243 GRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITY 302
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
+I C + + A + ++M ++ + D Y L+ C++ R +L M
Sbjct: 303 TALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 362
Query: 470 NDVSMDAGTYASLVRGLIESG 490
+ DA TY ++ + G
Sbjct: 363 VGLKPDARTYTMIINEFCKKG 383
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 120/272 (44%)
Query: 246 NSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYT 305
S + V LE K +F+ LI + ++ + DA + + + F +
Sbjct: 34 GSASAVFAVILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDTCR 93
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
+EH + K F+ V KE+ E G S+ + I+MH K + I A V++ +
Sbjct: 94 KVLEHLMKLKYFKLVWGFYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKW 153
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
P Y++L+ + G + + + M GV P+V TY+ +I+ C S+ ++A
Sbjct: 154 GLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDA 213
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
+L +M P+ T+ L+ C+ R+ + + M + D TY +L+ G
Sbjct: 214 NELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYG 273
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + G L+ A +EM KG+ P TY L
Sbjct: 274 LCKKGDLKQAHDLIDEMSMKGLKPDKITYTAL 305
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 153/316 (48%)
Query: 202 TIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC 261
++ V+ D ++ F M G + + L+ +V +S ++ F E K
Sbjct: 99 VMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIK 158
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ L F I+I G C+ +++ + + E+ + GFSP+VV YT I+ C+ + K
Sbjct: 159 VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAK 218
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D EM + G + TYT+++H L K + ++YEKM+ D P+ Y+ ++
Sbjct: 219 DLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQH 278
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
K GR KDA ++F++M+++GV N++TYNT+I C + A K++ +M+ D P+
Sbjct: 279 CKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNL 338
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ C ++ L + +S TY LV G + G A +E
Sbjct: 339 ITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKE 398
Query: 502 MISKGIVPYHSTYKML 517
M +GI P TY +L
Sbjct: 399 MEERGIKPSKITYTIL 414
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 150/293 (51%), Gaps = 2/293 (0%)
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
+E+ ++M E + + +L T + +M + + GR DA + F M++ GV + + L+
Sbjct: 253 FEMYEKMQE-DGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIG 311
Query: 241 TLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L + A KV + K D I + +N LI G+C K+ A +++ +G SP
Sbjct: 312 GLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+V+Y + +C++ D +KEM+E+G KPS ITYTI++ + + +A+++
Sbjct: 372 SLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLR 431
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
M+ PD YS LI G++ +A+ +F+ M + + PN + YNTM+ C
Sbjct: 432 SPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKE 491
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDV 472
AL+L ++MEE P+ +Y ++++ C++++ K L+ M +
Sbjct: 492 GSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGI 544
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 171/363 (47%), Gaps = 3/363 (0%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G++ +N ++ + S F W E + + + + +++ G +
Sbjct: 124 GFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVD--LDVYSFGIVIKGCCEAGEIEK 181
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIH 274
+ + ++++G + + L+D K +E A +F E K + + + +LIH
Sbjct: 182 SFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIH 241
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G K + ++M + G P++ +Y C + +C++ + EM+E+G
Sbjct: 242 GLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSC 301
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+++TY ++ L + + NEA KV ++MKSD P+ Y++LI G++ A +
Sbjct: 302 NIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLC 361
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
D+K +G+ P+++TYN ++S C + + A K++++MEE KP TY L+ R
Sbjct: 362 RDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARM 421
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
M+ L + M + ++ D TY+ L+ G G++ A F+ M++K + P Y
Sbjct: 422 DNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIY 481
Query: 515 KML 517
+
Sbjct: 482 NTM 484
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 158/331 (47%), Gaps = 1/331 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ +T++ + G + A + F M K+G+ + +VL+ L K + ++++
Sbjct: 197 NVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMY 256
Query: 256 LEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ + D + + +N +++ CK + DA K EM ++G S ++V+Y I CRE
Sbjct: 257 EKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCRE 316
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ + + +M+ G P++ITY ++ ++ +AL + +KS P Y
Sbjct: 317 MKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTY 376
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ L+ K G A ++ ++M+++G+ P+ +TY +I + E A++L MEE
Sbjct: 377 NILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEE 436
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD TY+ L+ C K +M + L M + + Y ++V G + G
Sbjct: 437 LGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYR 496
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
A F EM K + P ++Y+ + E L K+R
Sbjct: 497 ALRLFREMEEKELPPNVASYRYMIEVLCKER 527
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 132/293 (45%), Gaps = 34/293 (11%)
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP-------------------------- 299
S+++ ++I+ + +++ +D + EM +GF P
Sbjct: 94 SRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFN 153
Query: 300 --------DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
DV S+ I+ C + K D L E++E G P+V+ YT ++ K +
Sbjct: 154 ESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGE 213
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
I +A ++ +M + + Y+ LI L K G K E++E M++ GV PN+ TYN
Sbjct: 214 IEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNC 273
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+++ C ++A KL +M E + TY L+ CR+ + N ++ M +
Sbjct: 274 VMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDG 333
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
++ + TY +L+ G GKL A S ++ S+G+ P TY +L KK
Sbjct: 334 INPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKK 386
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 110/245 (44%), Gaps = 6/245 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS--LATMSTIMRRLVRGGRYDDAVEAFR 221
YNT++ L + K E K MD++ + ++ L T +T++ G+ A+ R
Sbjct: 306 YNTLIGGLCREMK---ANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCR 362
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTR 280
+K G+ ++L+ K A KV E ++ I S + ILI + +
Sbjct: 363 DLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMD 422
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
++ A + M + G +PDV +Y+ I +C + + K M K +P+ + Y
Sbjct: 423 NMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYN 482
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K AL+++ +M+ + P+ + Y +I +L K + K+A + E M
Sbjct: 483 TMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDT 542
Query: 401 GVVPN 405
G+ P+
Sbjct: 543 GIDPS 547
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 142 bits (357), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/355 (26%), Positives = 173/355 (48%), Gaps = 2/355 (0%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++ L K K +L KEM N + + S I++ L G DA F +
Sbjct: 364 YSILIHGLCKQGKVQQAIQLYKEM-CFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSL 422
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKV 282
+ D ++++D VK VE A +++ +D I S FN LI+G+CK RKV
Sbjct: 423 IMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKV 482
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A++ ++ + G P V+YT + YC E + K+ + L EM K +P+V+TYT+V
Sbjct: 483 VEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVV 542
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ L K +++ E++++ E M++ PD Y+++I KA ++ A E+ +DM +
Sbjct: 543 IKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNL 602
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
P TYN +I C + E+A ++L +++ Y ++K C K +
Sbjct: 603 EPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVK 662
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ M + + Y++++ L + + A +F M+S G+ P ++M+
Sbjct: 663 VFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMM 717
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 98/420 (23%), Positives = 186/420 (44%), Gaps = 73/420 (17%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA---- 251
S+ + +TIM R + G D A F M KYG+ DT + ++L+ L+ S+E A
Sbjct: 184 SVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELT 243
Query: 252 --------------YKVFLEFKDCIPLSSQ-------------------IFNILIHGWCK 278
YK+ + + L S + +LI G C+
Sbjct: 244 NDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQ 303
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+++A + +++ GF +V+ Y+ + C+ + L EM+ +P ++T
Sbjct: 304 MGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVT 363
Query: 339 YTIVMHALGKAKQINEALKVYEKM------------------------KSD-----DCL- 368
Y+I++H L K ++ +A+++Y++M SD D L
Sbjct: 364 YSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLI 423
Query: 369 -----PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
PD + Y+ +I K G V++A +++ ++ + + P+++T+N++I C +
Sbjct: 424 MSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVV 483
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
A +LL+ ++ +P TY L+ C + + L+ LL M D+ TY ++
Sbjct: 484 EARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVI 543
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHAKE 542
+GL + KLE + E+M +KG+ P TY + + K K + A E ++ +L H E
Sbjct: 544 KGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLE 603
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 129/310 (41%), Gaps = 40/310 (12%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
S Q +N L++ T + D +K+ G + + ++ C + FR L
Sbjct: 117 SIQTYNSLLYNLRHTDIMWDVYNDIKD---SGTPQSARTSSIIVDGLCGQSRFRDAVLFL 173
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
++ K PSV+++ +M K + A + M LPDT Y+ LI L A
Sbjct: 174 RQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVA 233
Query: 385 GRVKDANEIFEDMKKQGVVP------------------------------------NVLT 408
G +++A E+ DM+KQG+ P +++T
Sbjct: 234 GSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVT 293
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y +I C E AL+L + + + + Y+ LL C++ ++ LL M
Sbjct: 294 YTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEME 353
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLG 527
N++ D TY+ L+ GL + GK++ A ++EM I P + + + L EK L
Sbjct: 354 ANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLS 413
Query: 528 NAKERINKLL 537
+A+ + L+
Sbjct: 414 DARMYFDSLI 423
>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
Length = 447
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 92/350 (26%), Positives = 171/350 (48%), Gaps = 14/350 (4%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
A+ + ++R GR A+E F+ MK GVE D + +L+ L + A+ +F
Sbjct: 96 ASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSA 152
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
C P +N+L+ G+CK + +AQ MKE+ + G+ P+V +Y+ I YC+
Sbjct: 153 MT-CSP-DIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKV 210
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + +M E C P+ +T+ ++ KA + +A+K++ +M+ C Y++L
Sbjct: 211 EEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTL 270
Query: 378 IFILSKA-GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
I L K G V A ++F ++ G+ P ++TYN++I R+ + L+LL M +
Sbjct: 271 IDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERAND--GLRLLCHMHAEG 328
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
CKPD TY L+ C R++ L M + + T+ L+RGL K+E A
Sbjct: 329 CKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCAQKKVEEAR 385
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKTF 546
+ + M + + +++ ++ + + +A+E + +L H T+
Sbjct: 386 NILDRMTAPDMTTFNT---IILAFCKAGAMHDAREVMKDMLKHGFYPNTY 432
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 172/376 (45%), Gaps = 45/376 (11%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++R +GG+ AV F MK G+ + ++ L+ L + + A K+F E
Sbjct: 27 TYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREM 86
Query: 259 KDC--IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF------------------- 297
+ +P S+ NIL+ G+ + A + KEM G
Sbjct: 87 QAGPFLPTSAS-HNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDSGR 142
Query: 298 -------------SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMH 344
SPD+++Y ++ YC+ + +KE+ + G +P+V TY+I+++
Sbjct: 143 MAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIIN 202
Query: 345 ALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVP 404
K ++ EA +V+ KM +C+P+ +++LI KAG ++DA ++F +M+K G
Sbjct: 203 CYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKA 262
Query: 405 NVLTYNTMISSAC-ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
++TYNT+I S C R A+ L K+E P TY L++ + + L
Sbjct: 263 TIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSERANDGLR--L 320
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-E 522
L HM D TY L+ GL + ++E A F M P +T+ L L
Sbjct: 321 LCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGM---ACAPNVTTFNFLIRGLCA 377
Query: 523 KKRLGNAKERINKLLA 538
+K++ A+ ++++ A
Sbjct: 378 QKKVEEARNILDRMTA 393
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 126/261 (48%), Gaps = 16/261 (6%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ GY Y+ +++ K K WE+ +M E +N + T +T++ + G
Sbjct: 187 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIE-SNCVPNAVTFNTLIAGFCKAGML 245
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG-NSVEHAYKVF--LEFKDCIPLSSQIFN 270
+DA++ F M+K G + + L+D+L K V A +F LE P + +N
Sbjct: 246 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTP-TIVTYN 304
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI G+ + + +D + + M +G PDV++Y C I C +V+D +
Sbjct: 305 SLIQGF--SERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSAN---RVEDAQRLFNGM 359
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDA 390
C P+V T+ ++ L K++ EA + ++M + PD + ++++I KAG + DA
Sbjct: 360 ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHDA 415
Query: 391 NEIFEDMKKQGVVPNVLTYNT 411
E+ +DM K G PN TY T
Sbjct: 416 REVMKDMLKHGFYPN--TYTT 434
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 129/274 (47%), Gaps = 8/274 (2%)
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
++ +N+LI G+CK ++ A +M G P+ + + C
Sbjct: 24 NAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKLF 83
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+EMQ P+ ++ I++ A + A++ +++MK+ PD Y L+ LS +
Sbjct: 84 REMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSDS 140
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
GR+ +A+ +F M P+++TYN ++ C + A L++++ + +P+ TY
Sbjct: 141 GRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTY 197
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
+ ++ C+ +++ + M +++ +A T+ +L+ G ++G LE A F EM
Sbjct: 198 SIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEK 257
Query: 505 KGIVPYHSTYKMLEEKLEKKRLG--NAKERINKL 536
G TY L + L KKR G A + NKL
Sbjct: 258 IGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 291
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 83/164 (50%), Gaps = 4/164 (2%)
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
A++ ++AL++++++ + P+ Y+ LI K G++ A +F DMK G++PN T
Sbjct: 3 ARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNAST 62
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
NT++ C + +ALKL ++M+ P ++ LL+ R + F M
Sbjct: 63 MNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR--AIEF-FKEMK 119
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI-SKGIVPYH 511
+ V D +Y L+ L +SG++ A + F M S I+ Y+
Sbjct: 120 ASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYN 163
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 82/189 (43%), Gaps = 12/189 (6%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG--GRYDDAVEAFR 221
YNT++D L K + ++ V ++L L L++G R +D +
Sbjct: 267 YNTLIDSLCKKRGG--VYTAVDLFNKLEG--AGLTPTIVTYNSLIQGFSERANDGLRLLC 322
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRK 281
M G + D + L+ L N VE A ++F C P + FN LI G C +K
Sbjct: 323 HMHAEGCKPDVITYNCLISGLCSANRVEDAQRLF-NGMACAP-NVTTFNFLIRGLCAQKK 380
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
V++A+ + M +PD+ ++ I +C+ + +K+M + G P+ T
Sbjct: 381 VEEARNILDRMT----APDMTTFNTIILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYA 436
Query: 342 VMHALGKAK 350
+ H + +K
Sbjct: 437 LAHGIQSSK 445
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 172/368 (46%), Gaps = 9/368 (2%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
NT++ L + + F M L M N L T +T++ G A + +
Sbjct: 45 NTLLMALARHRMFPDMESLASRMPARN-----LRTYTTLINAYCLAGDIPAAKQHLTSLL 99
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKV 282
G+ D+ A + + + + HA +VF + + C+ ++ + L+HG V
Sbjct: 100 HAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLR-TAFTYTALLHGLLGAGMV 158
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A M +PD Y + C + + L+E G +P+++ Y +
Sbjct: 159 REAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNAL 218
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ A ++ ALKV+E M + C P+ Y+ LI L K+G+V+ A +F M + G+
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGL 278
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PNV+TY +I C + A +LL ME + P+ T++ L+ C++++++
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP-YHSTYKMLEEKL 521
L + K V ++ Y SL+ GL ++GK++ A ++MIS+G VP HS +++
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398
Query: 522 EKKRLGNA 529
+K+L A
Sbjct: 399 RQKKLSQA 406
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 159/361 (44%), Gaps = 38/361 (10%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEF 258
+T++ L GR ++A G E + + L+D +EHA KVF ++
Sbjct: 181 ATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDG 240
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
C P + + + LIHG CK+ KV+ A M + G P+VV+YT I+ C E +
Sbjct: 241 NRCSP-NVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299
Query: 319 --------------------------------KVDDT---LKEMQEKGCKPSVITYTIVM 343
KV++ L + +KG K + + YT ++
Sbjct: 300 CAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLI 359
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
L K +I+ A ++ +KM S+ +PD YSSLI L + ++ A + EDM ++G+
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
+ +TY +I E K+ KM PD TY ++ C + RM+ +
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ M V + TY +L+RG G + A S FE M+ KG P +Y +L + K
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVK 539
Query: 524 K 524
K
Sbjct: 540 K 540
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 155/333 (46%), Gaps = 4/333 (1%)
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSS 266
R G A F M G + + L+ L+ V A VF+ + C P +
Sbjct: 119 RAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAP-DT 177
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
++ ++HG C+ + ++A+ ++E GF P++V Y I+ YC + +
Sbjct: 178 HVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEG 237
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M C P+V TYT ++H L K+ ++ A+ ++ +M P+ Y++LI G
Sbjct: 238 MDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGH 297
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
++ A + M+ G+VPN T++ +I + C R + E A L + + K + Y
Sbjct: 298 LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+ C+ ++ + L+ M DA +Y+SL+ GL KL A E+M+ KG
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417
Query: 507 IVPYHSTYKMLEEKLEKKRLGNAKERI-NKLLA 538
I TY ++ ++L ++ ++I +K++A
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIA 450
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 157/331 (47%), Gaps = 6/331 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + +++ G A M+ G+ + SVL+D L K VE A ++F
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA-QLF 339
Query: 256 LE--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
L K + ++ ++ LI G CKT K+D A + M++M +GF PD SY+ I+ CR
Sbjct: 340 LGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCR 399
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+K + L++M EKG + S +TYTI++ L + K+++KM + PD
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ + + GR++DA + M +GV PN++TYNT+I A + M
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519
Query: 434 EDLCKPDCETYAPLLKMCCRKKRM--KVLNFLLTHMFK-NDVSMDAGTYASLVRGLIESG 490
KP+ ++Y LL++ +K V + + M + + D + L+ GL++ G
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQESNYDEIVWKILIYGLLQKG 579
Query: 491 KLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
+ S M G P ++ M+ ++
Sbjct: 580 SVAEFSSLLSVMKEHGYQPSNTINAMITGEI 610
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 159/341 (46%), Gaps = 2/341 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLE 257
T + ++ L+ G +A+ F GM+ DT + ++ L + G + E +
Sbjct: 144 TYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ + ++N LI G+C +++ A K + M SP+V +YT I C+
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ M E G +P+V+TYT ++ + A ++ M+++ +P+ +S L
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L K +V++A + K+GV N + Y ++I C + + A +L+QKM +
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD +Y+ L+ CR+K++ +L M + + TY ++ L+ E
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Query: 498 FFEEMISKGIVPYHSTYKM-LEEKLEKKRLGNAKERINKLL 537
F++MI+ GI P TY + + E+ R+ +A+ I +++
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMV 484
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 165/347 (47%), Gaps = 2/347 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ S I+ RL + D+A + + M G+ D S+L+ + A +
Sbjct: 197 NVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLL 256
Query: 256 LEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E + I + IL+ CK KV +A+ + M + + DVV Y+ ++ YC
Sbjct: 257 NEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLV 316
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ M + G P V Y+I+++ L K K+++EAL ++E++ + +PDT Y
Sbjct: 317 NEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTY 376
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+SLI L K+GR+ ++F++M +G P+V+TYN +I + C + A+ L KM++
Sbjct: 377 TSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKD 436
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+P+ T+ LL C+ R+K + ++ TY ++ GL + G L+
Sbjct: 437 QAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDE 496
Query: 495 ACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKLLAHA 540
A + M G + T++ M+ +K A++ + +++A
Sbjct: 497 ALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARG 543
Score = 135 bits (339), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 157/342 (45%), Gaps = 2/342 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T++T+M+ L G+ +A+ + G + +L++ + K A ++
Sbjct: 130 TLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRI 189
Query: 259 KD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ I + I++++I CK VD+A EM +G SPDVV+Y+ + +C
Sbjct: 190 ERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQL 249
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ D L EM + P + TYTI++ AL K ++ EA V M D YS+L
Sbjct: 250 NRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTL 309
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ V +A +F M + GV P+V Y+ MI+ C + AL L +++ +
Sbjct: 310 MDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNM 369
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD TY L+ C+ R+ + L M D TY +L+ L ++G L+ A +
Sbjct: 370 VPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIA 429
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLA 538
F +M + I P T+ +L + L K RL NA E LL
Sbjct: 430 LFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLT 471
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 150/319 (47%), Gaps = 4/319 (1%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNI 271
DDAV F M T + ++ +LV A ++ +E + P NI
Sbjct: 40 DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEP-DYFTLNI 98
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+I+ +C +V A + ++ + G+ P+ ++ ++ C E ++ ++ +G
Sbjct: 99 IINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQG 158
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+ S I+Y I+++ + K + A+++ +++ P+ YS +I L K V +A
Sbjct: 159 FRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAY 218
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+++ +M +G+ P+V+TY+ ++S C + A+ LL +M + PD TY L+
Sbjct: 219 DLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDAL 278
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++ ++K +L M K V++D Y++L+ G ++ A F M G+ P
Sbjct: 279 CKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDV 338
Query: 512 STYKMLEEKLEK-KRLGNA 529
Y ++ L K KR+ A
Sbjct: 339 HCYSIMINGLCKIKRVDEA 357
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 110/263 (41%), Gaps = 2/263 (0%)
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
T DDA MF +P + + K + K+M+ +P T
Sbjct: 36 THNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFT 95
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
I+++ Q+ A K+ P+T ++L+ L G+VK+A + +
Sbjct: 96 LNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVL 155
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
QG + ++Y +I+ C E A++LL+++E +P+ Y+ ++ C+ +
Sbjct: 156 AQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVD 215
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
L T M +S D TY+ LV G G+L A EM+ + I P TY +L
Sbjct: 216 EAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILV 275
Query: 519 EKLEKKRLGNAKERINKLLAHAK 541
+ L K+ G KE N L K
Sbjct: 276 DALCKE--GKVKEAENVLAVMVK 296
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 5/208 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD 260
S ++ L + R D+A+ F + + + DT + L+D L K + + + +F E D
Sbjct: 342 SIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLD 401
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
P +N LI CK +D A +M Q P+V ++T ++ C+ +
Sbjct: 402 RGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKN 461
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ +++ KG +V TYT++++ L K ++EAL + +M+ + C+ D +
Sbjct: 462 ALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFE---- 517
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVL 407
I+ +A KD N+ E + ++ + +L
Sbjct: 518 IMIRAFFDKDENDKAEKLVREMIARGLL 545
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 167/359 (46%), Gaps = 15/359 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN M+ S ++ L++EM E ++ T + ++ V+ G++ +A E + M
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLE-RKISPNVVTYNALINAFVKEGKFFEAAELYDEM 349
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G+ +T + ++D K + ++ A +F + K C P F LI G+C ++
Sbjct: 350 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSP-DVFTFTTLIDGYCGAKR 408
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+DD + + EM ++G + V+Y I +C D D ++M G P ++T
Sbjct: 409 IDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNT 468
Query: 342 VMHAL---GKAKQINEALKVYEKMKSD--------DCLPDTSFYSSLIFILSKAGRVKDA 390
++ L GK K E K +K K D PD Y+ LI L G+ +A
Sbjct: 469 LLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEA 528
Query: 391 NEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
E++E+M +G+VP+ +TY++MI C +S + A ++ M P+ T+ L+
Sbjct: 529 EELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLING 588
Query: 451 CCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ R+ L M + + DA Y +L+ G + G + A F+EMIS G+ P
Sbjct: 589 YCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYP 647
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/347 (27%), Positives = 167/347 (48%), Gaps = 14/347 (4%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYG-VEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T T + + + G A+ R M++ ++ + S ++D L K ++ +F+E
Sbjct: 219 TYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIE 278
Query: 258 FKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+D I + +N +I G+C + + AQ+ ++EM ++ SP+VV+Y I + +E
Sbjct: 279 MQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGK 338
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
F + + EM +G P+ ITY ++ K +++ A ++ M + C PD +++
Sbjct: 339 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 398
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
LI A R+ D E+ +M ++G+V N +TYNT+I C + AL L Q+M
Sbjct: 399 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 458
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG-----------TYASLVRG 485
PD T LL C ++K + M K+ + +DA TY L+ G
Sbjct: 459 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 518
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTY-KMLEEKLEKKRLGNAKE 531
LI GK A +EEM +GIVP TY M++ ++ RL A +
Sbjct: 519 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/353 (24%), Positives = 155/353 (43%), Gaps = 40/353 (11%)
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
A+ F + K G+ D + L+ L + V A +F + C P F L++G
Sbjct: 135 ALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI--CRP-DVLTFTTLMNG 191
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD-------FRKVDDT----- 323
C+ +V +A + M + G PD ++Y F++ C+ D RK+++
Sbjct: 192 LCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKP 251
Query: 324 ------------------------LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
EMQ+KG P+++TY ++ + + + A ++
Sbjct: 252 NVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLL 311
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
++M P+ Y++LI K G+ +A E++++M +G++PN +TYN+MI C +
Sbjct: 312 QEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQ 371
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ A + M C PD T+ L+ C KR+ LL M + + + TY
Sbjct: 372 DRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTY 431
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKE 531
+L+ G G L A ++MIS G+ P T L + L + +L +A E
Sbjct: 432 NTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALE 484
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 150/333 (45%), Gaps = 43/333 (12%)
Query: 243 VKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
+KG +E A +F + PL S I FN L+ + + D ++M ++ D+
Sbjct: 59 IKG--LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDI 116
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEK 361
S+T I+ +C T ++ + G P V+T+T ++H L +++EAL ++ +
Sbjct: 117 YSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQ 176
Query: 362 MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSE 421
+ C PD +++L+ L + GRV +A + + M + G+ P+ +TY T + C +
Sbjct: 177 I----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGD 232
Query: 422 EENALKLLQKMEE----------------DLCK--------------------PDCETYA 445
+AL LL+KMEE LCK P+ TY
Sbjct: 233 TVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
++ C R LL M + +S + TY +L+ ++ GK A ++EM+ +
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
GI+P TY + + K+ +A E + L+A
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 132/284 (46%), Gaps = 36/284 (12%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS------LATMSTIMRRLVR 209
G + YNT++ FCL+ +L +D L+ +S + T +T++ L
Sbjct: 423 GLVANTVTYNTLI------HGFCLVGDLNAALD-LSQQMISSGVCPDIVTCNTLLDGLCD 475
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF 269
G+ DA+E F+ M+K ++ D H + + + +
Sbjct: 476 NGKLKDALEMFKAMQKSKMDLDA----------------SHPF-------NGVEPDVLTY 512
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
NILI G K +A++ +EM +G PD ++Y+ I+ C++ + M
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
K P+V+T+ +++ KA ++++ L+++ +M + D Y +LI+ K G +
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
A +IF++M GV P+ +T M++ ++ E E A+ +L+ ++
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676
>gi|357127305|ref|XP_003565323.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Brachypodium distachyon]
Length = 746
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 90/354 (25%), Positives = 167/354 (47%), Gaps = 12/354 (3%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T ST++ L GR DDAV M GV A + ++ +++ V A K+F +
Sbjct: 316 TYSTVVSALADAGRVDDAVALVHEMVVDGVVA-AEAFNPVLGAMLRTGDVTGAAKLFSFM 374
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ K C P S+ +N+L+HG + A M+ M + P V++Y ++ R
Sbjct: 375 QLKGCAP-SAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVMTYGAVVDGLVRCGR 433
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
++EM+ KG P+ ++ V+ K +++ A +V++ M + P+ YS+
Sbjct: 434 LEDACKVIEEMRSKGLVPNEFVFSPVITGFCKLGEVDRASRVWDTMVAAGIKPNVVLYSA 493
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L++ G++ +A +F +M + VPN++TY++M+ + AL + M
Sbjct: 494 MIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGYFQIGDSSQALSFWEDMLRIG 553
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
C P+ TY+ L+ C R K + HM D Y S+++G SG ++
Sbjct: 554 CTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDTIAYTSMIKGFCVSGMVDAGL 613
Query: 497 SFFEEMISKG-----IVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKT 545
F +M+++G ++ Y+ +L+ L K L A + +N++L A + T
Sbjct: 614 RLFYDMLARGDTHPDVICYNV---LLDGLLRAKDLPRAMDLLNQMLDQACDPDT 664
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 153/373 (41%), Gaps = 64/373 (17%)
Query: 169 DVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGV 228
DV G +K F M +L S AT + ++ L+ GR A+ R M++ V
Sbjct: 363 DVTGAAKLFSFM--------QLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEV 414
Query: 229 EKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQ 286
++D LV+ +E A KV E K +P + +F+ +I G+CK +VD A
Sbjct: 415 VPGVMTYGAVVDGLVRCGRLEDACKVIEEMRSKGLVP-NEFVFSPVITGFCKLGEVDRAS 473
Query: 287 KAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK---------------- 330
+ M G P+VV Y+ I+ R + + +EM E
Sbjct: 474 RVWDTMVAAGIKPNVVLYSAMIDGLARCGKMTEAELLFREMIEAKCVPNIMTYSSMVRGY 533
Query: 331 -------------------GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
GC P+ +TY+++++ L + +A+ V++ M C+PDT
Sbjct: 534 FQIGDSSQALSFWEDMLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVPDT 593
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQG-VVPNVLTYNTMISSACARSEEENALKLLQ 430
Y+S+I +G V +F DM +G P+V+ YN ++ + A+ LL
Sbjct: 594 IAYTSMIKGFCVSGMVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLN 653
Query: 431 KMEEDLCKPD---CETYA--------------PLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+M + C PD C T+ L+ C +KR K +L M +
Sbjct: 654 QMLDQACDPDTVTCNTFLREIEVGQKGQEFLEGLVVRLCNRKRNKAAGEVLMVMLAKYIV 713
Query: 474 MDAGTYASLVRGL 486
+A +VRG+
Sbjct: 714 PEAAVLEMVVRGV 726
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
V+ + + +PD YS+++ L+ AGRV DA + +M GVV +N ++ +
Sbjct: 301 VHRSIPAWKLVPDKFTYSTVVSALADAGRVDDAVALVHEMVVDGVV-AAEAFNPVLGAML 359
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
+ A KL M+ C P TY LL R K ++ M + +V
Sbjct: 360 RTGDVTGAAKLFSFMQLKGCAPSAATYNVLLHGLLLCGRAKAAMGVMRRMERAEVVPGVM 419
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVP 509
TY ++V GL+ G+LE AC EEM SKG+VP
Sbjct: 420 TYGAVVDGLVRCGRLEDACKVIEEMRSKGLVP 451
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/260 (21%), Positives = 106/260 (40%), Gaps = 23/260 (8%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+Y+ M+D L + K L +EM E ++ T S+++R + G A+ +
Sbjct: 490 LYSAMIDGLARCGKMTEAELLFREMIE-AKCVPNIMTYSSMVRGYFQIGDSSQALSFWED 548
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M + G + SVL++ L + A V+ + + C+P + + +I G+C +
Sbjct: 549 MLRIGCTPNAVTYSVLINGLCNVGRSKDAMMVWKHMLGRGCVP-DTIAYTSMIKGFCVSG 607
Query: 281 KVDDAQKAMKEMFQQGFS-PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
VD + +M +G + PDV+ Y ++ R KD + D L +M ++ C P +T
Sbjct: 608 MVDAGLRLFYDMLARGDTHPDVICYNVLLDGLLRAKDLPRAMDLLNQMLDQACDPDTVTC 667
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+ + ++ E F L+ L R K A E+ M
Sbjct: 668 NTFLREIEVGQKGQE------------------FLEGLVVRLCNRKRNKAAGEVLMVMLA 709
Query: 400 QGVVPNVLTYNTMISSACAR 419
+ +VP ++ C R
Sbjct: 710 KYIVPEAAVLEMVVRGVCRR 729
>gi|224130680|ref|XP_002320901.1| predicted protein [Populus trichocarpa]
gi|222861674|gb|EEE99216.1| predicted protein [Populus trichocarpa]
Length = 475
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 96/397 (24%), Positives = 185/397 (46%), Gaps = 44/397 (11%)
Query: 147 FFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRR 206
F +A Q + H+ Y ++ LG++K F + +L+ ++ N V+ S I+
Sbjct: 86 IFDYASRQPNFQHSYSSYLILILKLGRAKYFSFIDDLLTDLKS-KNYPVTPTLFSYIINI 144
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG-NSVEHAYKVFLEFK--DCIP 263
D A++ F + K+ + L+ +++ LV N ++ A+ +F + D P
Sbjct: 145 YGEANLPDKALKIFYTILKFDCNPSPKHLNGILEILVSHQNYIKPAFDLFKDAHTYDVFP 204
Query: 264 LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDT 323
+++ +NILI +C ++ A +MF++ PDV SY ++ CR+ D
Sbjct: 205 -NTKSYNILIRAFCLNGQISMAYSLFNQMFKRDVMPDVESYRILMQALCRKSQVNGAVDL 263
Query: 324 LKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK 383
L++M KG P ++YT ++++L + K++ EA K+ +MK C PD Y+++I +
Sbjct: 264 LEDMLNKGYVPDALSYTTLLNSLCRKKKLREAYKLLCRMKVKGCNPDIIHYNTVILGFCR 323
Query: 384 AGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCET 443
GR DA ++ EDM+ G +PN+++Y T++ C + + A L++M
Sbjct: 324 EGRAMDACKVLEDMESNGCMPNLVSYRTLVGGLCDQGMFDEAKSHLEEM----------- 372
Query: 444 YAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
M K S +L++G GK+E AC EE++
Sbjct: 373 -----------------------MMKG-FSPHFAVSNALIKGFCNVGKIEEACGVVEELL 408
Query: 504 SKGIVPYHSTYKMLEEKL----EKKRLGNAKERINKL 536
G P+ T+ M+ ++ + +R+G +++ K+
Sbjct: 409 KHGEAPHTETWVMMVSRICEVDDLQRIGEILDKVKKV 445
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 53/281 (18%), Positives = 111/281 (39%), Gaps = 39/281 (13%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
N ++E L N + PAF F A T + +T + YN ++ + + + + L +
Sbjct: 174 NGILE-ILVSHQNYIKPAFDLFKDAHTYDVFPNT-KSYNILIRAFCLNGQISMAYSLFNQ 231
Query: 187 MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
M + + + + +M+ L R + + AV+ M G D + + L+++L +
Sbjct: 232 MFK-RDVMPDVESYRILMQALCRKSQVNGAVDLLEDMLNKGYVPDALSYTTLLNSLCRKK 290
Query: 247 SVEHAYKVFLEFK------DCIPLSSQI------------------------------FN 270
+ AYK+ K D I ++ I +
Sbjct: 291 KLREAYKLLCRMKVKGCNPDIIHYNTVILGFCREGRAMDACKVLEDMESNGCMPNLVSYR 350
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
L+ G C D+A+ ++EM +GFSP I+ +C + ++E+ +
Sbjct: 351 TLVGGLCDQGMFDEAKSHLEEMMMKGFSPHFAVSNALIKGFCNVGKIEEACGVVEELLKH 410
Query: 331 GCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
G P T+ +++ + + + ++ +K+K + DT
Sbjct: 411 GEAPHTETWVMMVSRICEVDDLQRIGEILDKVKKVELKGDT 451
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 172/368 (46%), Gaps = 9/368 (2%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
NT++ L + + F M L M N L T +T++ G A + +
Sbjct: 45 NTLLMALARHRMFPDMESLASRMPARN-----LRTYTTLINAYCLAGDIPAAKQHLTSLL 99
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKV 282
G+ D+ A + + + + HA +VF + + C+ ++ + L+HG V
Sbjct: 100 HAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLR-TAFTYTALLHGLLGAGMV 158
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A M +PD Y + C + + L+E G +P+++ Y +
Sbjct: 159 REAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNAL 218
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ A ++ ALKV+E M + C P+ Y+ LI L K+G+V+ A +F M + G+
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGL 278
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PNV+TY +I C + A +LL ME + P+ T++ L+ C++++++
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP-YHSTYKMLEEKL 521
L + K V ++ Y SL+ GL ++GK++ A ++MIS+G VP HS +++
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398
Query: 522 EKKRLGNA 529
+K+L A
Sbjct: 399 RQKKLSQA 406
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 157/333 (47%), Gaps = 15/333 (4%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + +++ G A M+ G+ + SVL+D L K VE A ++F
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA-QLF 339
Query: 256 LE--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
L K + ++ ++ LI G CKT K+D A + M++M +GF PD SY+ I+ CR
Sbjct: 340 LGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCR 399
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+K + L++M EKG + S +TYTI++ L + K+++KM + PD
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ + + GR++DA + M +GV PN++TYNT+I A + M
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519
Query: 434 EDLCKPDCETYAPLLKMCCRKKR------------MKVLNFLLTHMFKNDVSMDAGTYAS 481
KP+ ++Y LL++ +K MK L LL + + + + A Y+
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSC 579
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+R L +LE A FF M + + P Y
Sbjct: 580 FIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVY 612
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 159/361 (44%), Gaps = 38/361 (10%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEF 258
+T++ L GR ++A G E + + L+D +EHA KVF ++
Sbjct: 181 ATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDG 240
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
C P + + + LIHG CK+ KV+ A M + G P+VV+YT I+ C E +
Sbjct: 241 NRCSP-NVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299
Query: 319 --------------------------------KVDDT---LKEMQEKGCKPSVITYTIVM 343
KV++ L + +KG K + + YT ++
Sbjct: 300 CAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLI 359
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
L K +I+ A ++ +KM S+ +PD YSSLI L + ++ A + EDM ++G+
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
+ +TY +I E K+ KM PD TY ++ C + RM+ +
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ M V + TY +L+RG G + A S FE M+ KG P +Y +L + K
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVK 539
Query: 524 K 524
K
Sbjct: 540 K 540
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 155/333 (46%), Gaps = 4/333 (1%)
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSS 266
R G A F M G + + L+ L+ V A VF+ + C P +
Sbjct: 119 RAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAP-DT 177
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
++ ++HG C+ + ++A+ ++E GF P++V Y I+ YC + +
Sbjct: 178 HVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEG 237
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M C P+V TYT ++H L K+ ++ A+ ++ +M P+ Y++LI G
Sbjct: 238 MDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGH 297
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
++ A + M+ G+VPN T++ +I + C R + E A L + + K + Y
Sbjct: 298 LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+ C+ ++ + L+ M DA +Y+SL+ GL KL A E+M+ KG
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417
Query: 507 IVPYHSTYKMLEEKLEKKRLGNAKERI-NKLLA 538
I TY ++ ++L ++ ++I +K++A
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIA 450
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 159/341 (46%), Gaps = 2/341 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLE 257
T + ++ L+ G +A+ F GM+ DT + ++ L + G + E +
Sbjct: 144 TYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ + ++N LI G+C +++ A K + M SP+V +YT I C+
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ M E G +P+V+TYT ++ + A ++ M+++ +P+ +S L
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L K +V++A + K+GV N + Y ++I C + + A +L+QKM +
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD +Y+ L+ CR+K++ +L M + + TY ++ L+ E
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Query: 498 FFEEMISKGIVPYHSTYKM-LEEKLEKKRLGNAKERINKLL 537
F++MI+ GI P TY + + E+ R+ +A+ I +++
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMV 484
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/242 (22%), Positives = 106/242 (43%), Gaps = 14/242 (5%)
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+ +L T +T++R G A F M G + + + +VL+ +VK +S +++
Sbjct: 489 FPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVD 548
Query: 254 VF--LEFKDC-----------IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPD 300
++ + KD +PL++ I++ I C+ ++++A+ M +P
Sbjct: 549 IWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPS 608
Query: 301 VVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
YT I+ CR K L M + G P + +Y I++ +L + A +V+
Sbjct: 609 EDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFG 668
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+ + D + LI+ L + G V + + + MK+ G P+ T N MI+ +
Sbjct: 669 DLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSN-TINAMITGEITVT 727
Query: 421 EE 422
E
Sbjct: 728 NE 729
>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 860
Score = 141 bits (356), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 167/345 (48%), Gaps = 7/345 (2%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAF-RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL- 256
T ST+++ L R ++AV M + G + + S+++ L + + A +F
Sbjct: 194 TASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQM 253
Query: 257 ---EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E C P + +N +IHG+ K + A EM +QG PDVV+Y I+ C+
Sbjct: 254 MAKEGGACSP-NVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCK 312
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ K + L++M G +P +TY ++H ++ EA K++ KMKS +P+
Sbjct: 313 ARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVI 372
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+S + L K GR K+A EIF+ M +G P++++Y T++ + + + L M+
Sbjct: 373 CNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMK 432
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
+ DC + L+ ++ + + T M + VS D TY++++ G+L
Sbjct: 433 SNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLT 492
Query: 494 LACSFFEEMISKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKLL 537
A F +M+++GI P + Y +++ L AKE +++++
Sbjct: 493 DAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMI 537
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 145/329 (44%), Gaps = 6/329 (1%)
Query: 183 LVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG--VEKDTRALSVLM 239
L+ M EL G V ++ + S I++ L A++ F+ M K G + A + ++
Sbjct: 215 LLHRMSEL--GCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVI 272
Query: 240 DTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
K A +F E + + +N++I CK R +D A+ +++M G
Sbjct: 273 HGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQ 332
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
PD V+Y C I Y ++ ++M+ +G P+++ + +L K + EA ++
Sbjct: 333 PDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEI 392
Query: 359 YEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
++ M + PD Y +L+ + G D +F MK G+ + +N +I +
Sbjct: 393 FDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAK 452
Query: 419 RSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGT 478
R ++A+ + +M++ PD TY+ ++ R R+ M + +
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAV 512
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGI 507
Y S+++G G L A EMI+KGI
Sbjct: 513 YHSIIQGFCMHGGLVKAKELVSEMINKGI 541
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 145/358 (40%), Gaps = 74/358 (20%)
Query: 262 IPLSSQIFNILIHGWCKTRKVD-------------------DAQKAMK------------ 290
+PL+ ++IL+ C+ R+ D A +K
Sbjct: 153 VPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAV 212
Query: 291 -----EMFQQGFSPDVVSYTCFIEHYC--------------------------------- 312
M + G P+V SY+ ++ C
Sbjct: 213 NVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVI 272
Query: 313 ----REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCL 368
+E + K EM +G KP V+TY +++ AL KA+ +++A V +M ++
Sbjct: 273 HGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQ 332
Query: 369 PDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKL 428
PDT Y+ +I + GR+K+A ++F MK +G++PN++ N+ ++S C + A ++
Sbjct: 333 PDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEI 392
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
M KPD +Y LL + + L M N ++ D + L+ +
Sbjct: 393 FDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAK 452
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHAKEQKT 545
G ++ A F EM +G+ P TY + + RL +A E+ N+++A + T
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNT 510
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 155/365 (42%), Gaps = 37/365 (10%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRAL-SVLMDTLVKGNSVEHAYKVF 255
+ T ST++ R GR DA+E F M G++ +T S++ + G V+ V
Sbjct: 475 VVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVS 534
Query: 256 LEFKDCIPLSSQIF-NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC-- 312
IP +F N +I+ CK +V DA + G PDV+++T I+ YC
Sbjct: 535 EMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLV 594
Query: 313 --REKDFR----------------------------KVDDTL---KEMQEKGCKPSVITY 339
+K F+ +++D L +EMQ KG KP+ +TY
Sbjct: 595 GKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTY 654
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
I++ L +A + A K + +M S Y ++ L + +A +F+ +
Sbjct: 655 GIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGT 714
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
V ++ NTMI++ +E A +L + P+ TY ++ + ++
Sbjct: 715 MNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVED 774
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
N + + M K+ + + ++R L+E G++ A ++ ++ K I+ ST ++
Sbjct: 775 ANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLS 834
Query: 520 KLEKK 524
+K
Sbjct: 835 LFSRK 839
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 150/346 (43%), Gaps = 31/346 (8%)
Query: 182 ELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLM 239
ELV EM +N G + ++++ L + GR DA + F + G D + L+
Sbjct: 531 ELVSEM--INKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLI 588
Query: 240 DTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
D ++ A+K+ L+ + + + + I ++ L+ G+ K +++D +EM ++G
Sbjct: 589 DGYCLVGKMDKAFKI-LDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGV 647
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
P+ V+Y + R EM E G +V Y I++ L + +EA+
Sbjct: 648 KPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAII 707
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+++K+ + + + +++I + K R ++A E+F + G++PN TY MI +
Sbjct: 708 LFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLL 767
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E+A + ME+ P ++LN ++ + + AG
Sbjct: 768 KDGAVEDANNMFSSMEKSGIVPGS----------------RLLNRIIRMLLEKGEIAKAG 811
Query: 478 TYASLVRG---LIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
Y S V G L+E+ L S F KG YH K+L K
Sbjct: 812 NYLSKVDGKRILLEASTTSLMLSLFSR---KG--KYHEDMKLLPAK 852
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 165/331 (49%), Gaps = 5/331 (1%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMK--KYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+ S ++ + G DA+E +R + K+ V DT +++ ++K + +
Sbjct: 55 IYVFSGLITAYLESGFLRDAIECYRLTREHKFWVPFDT--CRKVLEHMMKLKYFKLVWGF 112
Query: 255 FLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ E +C P S FNIL+H +CK + AQ + + G P VVS+ + Y R
Sbjct: 113 YEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIR 172
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
D + M G +P V TY+++++ L K ++++A +++++M +P+
Sbjct: 173 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVT 232
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
+++LI K+GRV A EI++ M Q + P+++TYNT+I C + + + A L+ +M
Sbjct: 233 FTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMS 292
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
KPD TY L+ CC++ ++ M + ++ +D Y +L+ GL + G+
Sbjct: 293 MKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYL 352
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
A EM+S G+ P TY M+ + KK
Sbjct: 353 DAEKVLREMLSAGLKPDTGTYTMIINEFCKK 383
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 130/255 (50%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K + ++ A ++F
Sbjct: 159 SVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF 218
Query: 256 LEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E D +P + F LI G CK+ +VD A + K+M Q SPD+++Y I C+
Sbjct: 219 DEMLDKGLVP-NGVTFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCK 277
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ D + EM KG KP ITYT ++ K + A + ++M ++ D
Sbjct: 278 KGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVA 337
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P+ TY +I+ C + + KLL++M+
Sbjct: 338 YTALISGLCQEGRYLDAEKVLREMLSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 397
Query: 434 EDLCKPDCETYAPLL 448
D P TY L+
Sbjct: 398 RDGHVPSVVTYNVLM 412
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 154/346 (44%), Gaps = 37/346 (10%)
Query: 173 KSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
K K F L+W +E+ L GY SL + +M R + G A F + K+G+
Sbjct: 102 KLKYFKLVWGFYEEI--LECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPS 159
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKE 291
+ FN L++G+ + +D+ +
Sbjct: 160 VVS----------------------------------FNTLMNGYIRLGDLDEGFRLKSA 185
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M G PDV +Y+ I C+E ++ EM +KG P+ +T+T ++ K+ +
Sbjct: 186 MHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKSGR 245
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++ A+++Y++M S PD Y++LI+ L K G +K A+++ ++M +G+ P+ +TY T
Sbjct: 246 VDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTT 305
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
+I C + E A + ++M ++ + D Y L+ C++ R +L M
Sbjct: 306 LIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREMLSAG 365
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ D GTY ++ + G + +EM G VP TY +L
Sbjct: 366 LKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVL 411
>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/399 (24%), Positives = 187/399 (46%), Gaps = 24/399 (6%)
Query: 130 VEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE 189
V+ L + D + FF WAKT+ H+ E + ++ L K++KF +++ D
Sbjct: 84 VKNVLLKIQKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAESILR--DV 141
Query: 190 LNNGYVSLAT-------------------MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEK 230
L NG V L ++ + ++ +A + F MK YG
Sbjct: 142 LVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLFKTFAHLKKFRNATDTFMQMKDYGFLP 201
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ + M +L+ V+ A + + E + C I + N+++ G+C++ K+D + +
Sbjct: 202 TVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSGKLDKGIELL 261
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK-GCKPSVITYTIVMHALGK 348
++M + GF VSY I +C EK LK M K G +P+V+T+ ++H +
Sbjct: 262 QDMERLGFRATDVSYNTLIAGHC-EKGLLSSALKLKNMMGKSGLQPNVVTFNTLIHGFCR 320
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
A ++ EA KV+ +MK+ + P+T Y++LI S+ G + A +EDM G+ ++LT
Sbjct: 321 AMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
YN +I C +++ A + +++++++ P+ T++ L+ C +K L M
Sbjct: 381 YNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRGFELYKSMI 440
Query: 469 KNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
++ + T+ LV + + A EM+ + I
Sbjct: 441 RSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSI 479
>gi|302758668|ref|XP_002962757.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
gi|300169618|gb|EFJ36220.1| hypothetical protein SELMODRAFT_70280 [Selaginella moellendorffii]
Length = 439
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 188/378 (49%), Gaps = 42/378 (11%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T S ++ L + GR +AVE + M + + R +++L+ +L + +++ A +F
Sbjct: 5 TFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGI 64
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS--PDVVSYTCFIEHYCR--- 313
+ C P S NILI+G+C+ + +D A + EM ++ F+ P+ +YT I+ YC+
Sbjct: 65 Q-CSP-SVITLNILINGFCELQLLDKALELFHEM-EKNFALVPEATTYTAIIKCYCKMDR 121
Query: 314 ------------------------EKDF---RKVDDT----LKEMQEKGCKPSVITYTIV 342
+ F ++VD+ L +++K KP ++ + ++
Sbjct: 122 LDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVI 181
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM--KKQ 400
+H KA ++ EA ++ E + S C+P+ Y++LI K+G + +A ++F+ + +
Sbjct: 182 IHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDH 241
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
PNV+T+N +IS C E+A +L+++M+ + D TY L+ C++ R +
Sbjct: 242 HAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEV 301
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
+ + M + + TY +LV ++G L+ A M++KGI P +TY +L E
Sbjct: 302 SRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEG 361
Query: 521 L-EKKRLGNAKERINKLL 537
L E ++ A E K+L
Sbjct: 362 LFENGKVRTATEFFEKIL 379
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 176/348 (50%), Gaps = 8/348 (2%)
Query: 182 ELVKEMDELNNGYVSLATMST-IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
EL EM++ N V AT T I++ + R D A + + D A++ +
Sbjct: 91 ELFHEMEK-NFALVPEATTYTAIIKCYCKMDRLDQARQLLE--ESSCCSSDVIAITSVAR 147
Query: 241 TLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKTRKVDDAQKAMKEMFQQGFS 298
K V+ AY++ L+ + I +N++IHG+CK +V +A + ++ + G
Sbjct: 148 GFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCV 207
Query: 299 PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG--CKPSVITYTIVMHALGKAKQINEAL 356
P+ V+YT I+ +C+ + + K + + +P+V+T+ ++ L KA ++ A
Sbjct: 208 PNAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAF 267
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
++ ++MK+ D DT Y++L+ L K GR + + +FE+M ++G P+V+TY T++ +
Sbjct: 268 ELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAH 327
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
C ++A ++++ M PD TY LL+ +++ + + A
Sbjct: 328 CKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCA 387
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
Y++LVRG ++ ++ A ++ EM+ + + P +T K+L E L K+
Sbjct: 388 VVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKR 435
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 137/279 (49%), Gaps = 3/279 (1%)
Query: 181 WELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
++L+ +M E + + + I+ + GR +A E + G + + L+D
Sbjct: 159 YQLLLDMVEKKSAKPDIVAWNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLID 218
Query: 241 TLVKGNSVEHAYKVF--LEFKDCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
K ++ A ++F L +D + + FN LI G CK +++ A + +K+M +
Sbjct: 219 GFCKSGNLSEALQLFKVLSSRDHHAEPNVVTFNALISGLCKADRLEHAFELVKQMKARDL 278
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
D +YT ++ C++ +V +EM +GC PSV+TYT ++HA KA + +A +
Sbjct: 279 RADTFTYTTLMDGLCKQGRTSEVSRVFEEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQ 338
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
V M + PD + Y+ L+ L + G+V+ A E FE + ++ P + Y+ ++ C
Sbjct: 339 VIRSMVAKGIPPDVTTYTVLLEGLFENGKVRTATEFFEKILRERCPPCAVVYSALVRGCC 398
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
+ + A+K +M + PD T L++M C++ R
Sbjct: 399 KAALVDEAVKYYVEMLDRRLAPDPATCKLLVEMLCKRGR 437
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 91/432 (21%), Positives = 189/432 (43%), Gaps = 13/432 (3%)
Query: 69 LAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSK--QYQSPDKVVEALKGCGVSVS 126
+AG ++ RL E +++L + ++ I+ +L+ Q + D+ + +G S S
Sbjct: 10 IAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAIFRGIQCSPS 69
Query: 127 NSLVEQTLRRFS--NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV 184
+ + F L A F + + Y ++ K + +L+
Sbjct: 70 VITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYCKMDRLDQARQLL 129
Query: 185 KEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM-KKYGVEKDTRALSVLMDTLV 243
+E ++ +++ +++ R + R D+A + M +K + D A +V++
Sbjct: 130 EESSCCSSDVIAI---TSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVAWNVIIHGFC 186
Query: 244 KGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF--SP 299
K V AY++ L C+P ++ + LI G+CK+ + +A + K + + P
Sbjct: 187 KAGRVREAYEMLETLVSMGCVP-NAVTYTTLIDGFCKSGNLSEALQLFKVLSSRDHHAEP 245
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+VV++ I C+ + +K+M+ + + TYT +M L K + +E +V+
Sbjct: 246 NVVTFNALISGLCKADRLEHAFELVKQMKARDLRADTFTYTTLMDGLCKQGRTSEVSRVF 305
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
E+M + C P Y++L+ KAG ++DA ++ M +G+ P+V TY ++
Sbjct: 306 EEMLREGCNPSVVTYTTLVHAHCKAGSLQDAQQVIRSMVAKGIPPDVTTYTVLLEGLFEN 365
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ A + +K+ + C P Y+ L++ CC+ + M ++ D T
Sbjct: 366 GKVRTATEFFEKILRERCPPCAVVYSALVRGCCKAALVDEAVKYYVEMLDRRLAPDPATC 425
Query: 480 ASLVRGLIESGK 491
LV L + G+
Sbjct: 426 KLLVEMLCKRGR 437
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 100/236 (42%), Gaps = 40/236 (16%)
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+ T+++++ L KA ++ EA++ Y +M C+P+ + L+ L +AG + A I
Sbjct: 1 PNRFTFSVLIAGLCKAGRLGEAVECYNQMLERHCVPNLRDINLLLASLCQAGTMDQAMAI 60
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC-KPDCETYAPLLKMCC 452
F ++ P+V+T N +I+ C + AL+L +ME++ P+ TY ++K C
Sbjct: 61 FRGIQ---CSPSVITLNILINGFCELQLLDKALELFHEMEKNFALVPEATTYTAIIKCYC 117
Query: 453 RKKRM----------------------------------KVLNFLLTHMFKNDVSMDAGT 478
+ R+ + LL + K D
Sbjct: 118 KMDRLDQARQLLEESSCCSSDVIAITSVARGFCKAQRVDEAYQLLLDMVEKKSAKPDIVA 177
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
+ ++ G ++G++ A E ++S G VP TY L + K GN E +
Sbjct: 178 WNVIIHGFCKAGRVREAYEMLETLVSMGCVPNAVTYTTLIDGFCKS--GNLSEALQ 231
>gi|15239488|ref|NP_200904.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75262710|sp|Q9FME4.1|PP438_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g60960, mitochondrial; Flags: Precursor
gi|10177319|dbj|BAB10645.1| unnamed protein product [Arabidopsis thaliana]
gi|332010020|gb|AED97403.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 213/478 (44%), Gaps = 43/478 (8%)
Query: 12 SQSHLQKHAKIYYLCYLSCNPLCTTAESPSSTESPSLPSWIKFFDSQSPDEDFVIPSLAG 71
S + LQ +I +S PL + S+ + PS +FF S++ E
Sbjct: 23 SVNTLQSQPRI-----ISSKPLFSPLPPSRSSIFSTFPS--RFFSSETNAES-------- 67
Query: 72 WVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVE 131
ES NE + S+ L+ N + + IS+ + + ++ + L+
Sbjct: 68 --ESLDSNEIALSFSKELTGNPDAESQTISQRFNLSFSH------------ITPNPDLIL 113
Query: 132 QTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN 191
QTL A GF W + + + HT E + VD G+ K F M E++ + +
Sbjct: 114 QTLNLSPEAGRAALGFNEWLDSNSNFSHTDETVSFFVDYFGRRKDFKGMLEIISKYKGIA 173
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKK-YGVEKDTRALSVLMDTLVKGNSVEH 250
G T+ + + RLVR GR + F M+ YG+++D +L++++ L +
Sbjct: 174 GG----KTLESAIDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASI 229
Query: 251 AYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE- 309
A K+ + I I ++LI GWC K+D+A + EM + GF +Y ++
Sbjct: 230 AEKMVKNTANEIFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDC 289
Query: 310 --HYCREKD-FR---KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
CR+KD F+ +V+ L EM+ +G + T+ ++++ L K ++ EA+ ++ +M
Sbjct: 290 VCKLCRKKDPFKLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMG 349
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV--VPNVLTYNTMISSACARSE 421
C PD Y LI L +A R+ + +E+ + MK G + N Y + C
Sbjct: 350 EWGCQPDAETYLVLIRSLYQAARIGEGDEMIDKMKSAGYGELLNKKEYYGFLKILCGIER 409
Query: 422 EENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
E+A+ + + M+ + CKP +TY L+ C ++ N L K +++ Y
Sbjct: 410 LEHAMSVFKSMKANGCKPGIKTYDLLMGKMCANNQLTRANGLYKEAAKKGIAVSPKEY 467
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 91/207 (43%), Gaps = 9/207 (4%)
Query: 308 IEHYCREKDFRKVDDTLKEMQ-EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I+ R ++V D ++M+ + G K + T+V+ L + + A K+ K +++
Sbjct: 182 IDRLVRAGRPKQVTDFFEKMENDYGLKRDKESLTLVVKKLCEKGHASIAEKMV-KNTANE 240
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
PD + LI A ++ +A + +M + G YN M+ C +++
Sbjct: 241 IFPDENICDLLISGWCIAEKLDEATRLAGEMSRGGFEIGTKAYNMMLDCVCKLCRKKDPF 300
Query: 427 KLLQKMEEDLCK-------PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
KL ++E+ L + + ET+ L+ C+ +R + L M + DA TY
Sbjct: 301 KLQPEVEKVLLEMEFRGVPRNTETFNVLINNLCKIRRTEEAMTLFGRMGEWGCQPDAETY 360
Query: 480 ASLVRGLIESGKLELACSFFEEMISKG 506
L+R L ++ ++ ++M S G
Sbjct: 361 LVLIRSLYQAARIGEGDEMIDKMKSAG 387
>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
Length = 595
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 92/326 (28%), Positives = 158/326 (48%), Gaps = 43/326 (13%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN + D + + ++V M++ ++ TM+TI+ L R GR A+E FR
Sbjct: 243 YNCLADAFCRVGDIGMACKIVARMEK-EGVAPNVITMNTIIGGLCRVGRVGAALEFFR-- 299
Query: 224 KKYGVEKDTRALSVLMDTLVKG----NSVEHAYKVFLEFKD------------------- 260
+K V + R +V TL N+V+ A ++F E D
Sbjct: 300 EKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQ 359
Query: 261 -------C----------IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
C L ++ +NILI G+C+ +K+ +A + ++EM G PDV +
Sbjct: 360 AGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYT 419
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y + C+ DF VD+ L M + GC+PSV+T+ ++H KA + +EAL+++ M
Sbjct: 420 YNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMD 479
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
P+T Y++LI L K+ V A ++F++M+++ V NV TYN ++ + E
Sbjct: 480 EARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAE 539
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLK 449
A +L+ +M E+ C P+ T L++
Sbjct: 540 KAFELMDRMREERCTPNYVTVDVLME 565
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/409 (24%), Positives = 182/409 (44%), Gaps = 19/409 (4%)
Query: 129 LVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD 188
L+ + +RRFS+ A GF + ++N+++ LG++ M EL M
Sbjct: 100 LLSKLVRRFSSP-AEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMR 158
Query: 189 ELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG--VEKDTRALSVLMDTLVKGN 246
+ + + T ++ L + G DA++ M G V D L+ ++D L K
Sbjct: 159 DASV-KPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIG 217
Query: 247 SVEHAYKVFLE-----FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
++ A +F++ C P ++ +N L +C+ + A K + M ++G +P+V
Sbjct: 218 RLQQAI-IFVDERMRHVHGCAP-NAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNV 275
Query: 302 VSYTCFIEHYCREKDFRKVDDTLKEMQEKG-----CKPSVITYTIVMHALGKAKQINEAL 356
++ I CR +V L+ +EK + + +TY+ + A ++ A+
Sbjct: 276 ITMNTIIGGLCR---VGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAM 332
Query: 357 KVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSA 416
+++ +M PD Y ++I L++AGR+ DA MKK G + YN +I
Sbjct: 333 ELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGF 392
Query: 417 CARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDA 476
C + + A +LL++M+ +PD TY LL C+ ++ LL HM +
Sbjct: 393 CRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSV 452
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
T+ +LV G ++GK + A F M I P Y L + L K R
Sbjct: 453 VTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSR 501
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 157/363 (43%), Gaps = 4/363 (1%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKE-MDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
+ NT+VD L K + V E M ++ + T + + R G A +
Sbjct: 205 ILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVA 264
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLS---SQIFNILIHGWCK 278
M+K GV + ++ ++ L + V A + F E + P + + ++ L +
Sbjct: 265 RMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLH 324
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
VD A + EM G PD V Y I + T M++ G K
Sbjct: 325 CNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKA 384
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y I++ + K+++EA ++ E+MK PD Y++L+ L KAG +E+ M
Sbjct: 385 YNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMI 444
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
G P+V+T+ T++ C + + AL++ + M+E +P+ Y L+ C+ + +
Sbjct: 445 DDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVD 504
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
V L M + +V + TY +L++GL + E A + M + P + T +L
Sbjct: 505 VAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLM 564
Query: 519 EKL 521
E L
Sbjct: 565 EWL 567
>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
Length = 786
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 171/383 (44%), Gaps = 4/383 (1%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
A WA + +V LG+ + + L+ EM + + +T+
Sbjct: 122 ALALLRWAGAEGA--ADASALEMVVRALGREGQHDAVCALLDEMPLPPGSRLDVRAYTTV 179
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLEFKDC- 261
+ L R GRY+ AVE F +++ GV +V++D + G S + E +
Sbjct: 180 LHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAG 239
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ + +I C+ VD+A +++ +G +P VV+Y ++ + + ++ +
Sbjct: 240 VEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEAL 299
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
LKEM++ GC+P +TY + +A EA K + M S LP+ Y++++
Sbjct: 300 RVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAY 359
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
G+V +A +F+ MKK G VPNV TYN ++ +S L++L +M C P+
Sbjct: 360 GNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNR 419
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
T+ +L +C ++ + +L M V + TY +L+ G A + E
Sbjct: 420 VTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNE 479
Query: 502 MISKGIVPYHSTYKMLEEKLEKK 524
M S G P +TY L L ++
Sbjct: 480 MTSAGFAPCLTTYNALLNVLSRQ 502
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/391 (23%), Positives = 185/391 (47%), Gaps = 15/391 (3%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
++G + YN ++ +LGK +F +M E++ EM + + T +T++ + G
Sbjct: 377 KSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSR-SGCTPNRVTWNTMLAVCGKRGME 435
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-----FKDCIPLSSQI 268
D GMK GVE + L+ + S +A+K++ E F C+ + +
Sbjct: 436 DYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNAL 495
Query: 269 FNILIHGWCKTRKVD--DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
N+L +R+ D AQ + +M +GF P+ SY+ ++ Y + + +D KE
Sbjct: 496 LNVL------SRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKE 549
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
+ PS + ++ A K +++ K ++++K+ PD ++S++ + +K G
Sbjct: 550 VYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGM 609
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
EIF+ +K+ G+ P+++TYN+++ SE A K+L +++ KPD +Y
Sbjct: 610 YSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNT 669
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
++ C++ +K +L+ M + ++ TY +LV G A MI
Sbjct: 670 VINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHN 729
Query: 507 IVPYHSTY-KMLEEKLEKKRLGNAKERINKL 536
+ P TY ++++ + KR A+ ++++
Sbjct: 730 LKPMELTYRRVVDSYCKAKRFEEARSFLSEV 760
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 148/316 (46%), Gaps = 4/316 (1%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVS-LATMSTIMRRLVRGGRYDDAVEAF 220
+ YNT++ G+ +++ EM + G+ L T + ++ L R G + A
Sbjct: 455 DTYNTLIAAYGRCGSRTNAFKMYNEMT--SAGFAPCLTTYNALLNVLSRQGDWSTAQSIV 512
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKT 279
M+ G + + ++ S+L+ KG ++ + E + + S I L+ K
Sbjct: 513 SKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKC 572
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
R++ +KA +E+ +G++PD+V + + Y + + KV + +++ G P +ITY
Sbjct: 573 RRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITY 632
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+M K + EA K+ ++KS PD Y+++I K G +K+A I +M
Sbjct: 633 NSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIA 692
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
G+ P V+TY+T++ + A +++ M + KP TY ++ C+ KR +
Sbjct: 693 DGMAPCVVTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAKRFEE 752
Query: 460 LNFLLTHMFKNDVSMD 475
L+ + + D + D
Sbjct: 753 ARSFLSEVSETDPNFD 768
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/355 (20%), Positives = 144/355 (40%), Gaps = 41/355 (11%)
Query: 159 HTP--EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
HTP YN ++ V GK+ G Y +A
Sbjct: 275 HTPCVVTYNALLQVFGKA------------------------------------GNYTEA 298
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIH 274
+ + M++ G + D + L T + E A K + K +P ++ +N ++
Sbjct: 299 LRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLP-NAFTYNTVMT 357
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
+ KVD+A +M + G P+V +Y + ++ F + + L EM GC P
Sbjct: 358 AYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTP 417
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ +T+ ++ GK + +V E MKS Y++LI + G +A +++
Sbjct: 418 NRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMY 477
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+M G P + TYN +++ + + A ++ KM KP+ ++Y+ LL+ +
Sbjct: 478 NEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKG 537
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ ++ + ++ V +LV + +L F+E+ ++G P
Sbjct: 538 GNIAGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNP 592
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 172/368 (46%), Gaps = 9/368 (2%)
Query: 165 NTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMK 224
NT++ L + + F M L M N L T +T++ G A + +
Sbjct: 45 NTLLMALARHRMFPDMESLASRMPARN-----LRTYTTLINAYCLAGDIPAAKQHLTSLL 99
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKV 282
G+ D+ A + + + + HA +VF + + C+ ++ + L+HG V
Sbjct: 100 HAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLR-TAFTYTALLHGLLGAGMV 158
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
+A M +PD Y + C + + L+E G +P+++ Y +
Sbjct: 159 REAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNAL 218
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+ A ++ ALKV+E M + C P+ Y+ LI L K+G+V+ A +F M + G+
Sbjct: 219 IDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGL 278
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNF 462
PNV+TY +I C + A +LL ME + P+ T++ L+ C++++++
Sbjct: 279 EPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQL 338
Query: 463 LLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP-YHSTYKMLEEKL 521
L + K V ++ Y SL+ GL ++GK++ A ++MIS+G VP HS +++
Sbjct: 339 FLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLC 398
Query: 522 EKKRLGNA 529
+K+L A
Sbjct: 399 RQKKLSQA 406
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 157/333 (47%), Gaps = 15/333 (4%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + +++ G A M+ G+ + SVL+D L K VE A ++F
Sbjct: 281 NVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEA-QLF 339
Query: 256 LE--FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
L K + ++ ++ LI G CKT K+D A + M++M +GF PD SY+ I+ CR
Sbjct: 340 LGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCR 399
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+K + L++M EKG + S +TYTI++ L + K+++KM + PD
Sbjct: 400 QKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVT 459
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ + + GR++DA + M +GV PN++TYNT+I A + M
Sbjct: 460 YTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMV 519
Query: 434 EDLCKPDCETYAPLLKMCCRKKR------------MKVLNFLLTHMFKNDVSMDAGTYAS 481
KP+ ++Y LL++ +K MK L LL + + + + A Y+
Sbjct: 520 GKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSC 579
Query: 482 LVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+R L +LE A FF M + + P Y
Sbjct: 580 FIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVY 612
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/361 (27%), Positives = 159/361 (44%), Gaps = 38/361 (10%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEF 258
+T++ L GR ++A G E + + L+D +EHA KVF ++
Sbjct: 181 ATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDG 240
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
C P + + + LIHG CK+ KV+ A M + G P+VV+YT I+ C E +
Sbjct: 241 NRCSP-NVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQ 299
Query: 319 --------------------------------KVDDT---LKEMQEKGCKPSVITYTIVM 343
KV++ L + +KG K + + YT ++
Sbjct: 300 CAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLI 359
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
L K +I+ A ++ +KM S+ +PD YSSLI L + ++ A + EDM ++G+
Sbjct: 360 DGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQ 419
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
+ +TY +I E K+ KM PD TY ++ C + RM+ +
Sbjct: 420 ASPVTYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESM 479
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
+ M V + TY +L+RG G + A S FE M+ KG P +Y +L + K
Sbjct: 480 IVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVK 539
Query: 524 K 524
K
Sbjct: 540 K 540
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 155/333 (46%), Gaps = 4/333 (1%)
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSS 266
R G A F M G + + L+ L+ V A VF+ + C P +
Sbjct: 119 RAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAP-DT 177
Query: 267 QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKE 326
++ ++HG C+ + ++A+ ++E GF P++V Y I+ YC + +
Sbjct: 178 HVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEG 237
Query: 327 MQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
M C P+V TYT ++H L K+ ++ A+ ++ +M P+ Y++LI G
Sbjct: 238 MDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGH 297
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAP 446
++ A + M+ G+VPN T++ +I + C R + E A L + + K + Y
Sbjct: 298 LQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTS 357
Query: 447 LLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG 506
L+ C+ ++ + L+ M DA +Y+SL+ GL KL A E+M+ KG
Sbjct: 358 LIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKG 417
Query: 507 IVPYHSTYKMLEEKLEKKRLGNAKERI-NKLLA 538
I TY ++ ++L ++ ++I +K++A
Sbjct: 418 IQASPVTYTIIIDELVREVGSEGPKKIFDKMIA 450
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 159/341 (46%), Gaps = 2/341 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK-GNSVEHAYKVFLE 257
T + ++ L+ G +A+ F GM+ DT + ++ L + G + E +
Sbjct: 144 TYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ + ++N LI G+C +++ A K + M SP+V +YT I C+
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKV 263
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ M E G +P+V+TYT ++ + A ++ M+++ +P+ +S L
Sbjct: 264 ERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVL 323
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I L K +V++A + K+GV N + Y ++I C + + A +L+QKM +
Sbjct: 324 IDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGF 383
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD +Y+ L+ CR+K++ +L M + + TY ++ L+ E
Sbjct: 384 VPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKK 443
Query: 498 FFEEMISKGIVPYHSTYKM-LEEKLEKKRLGNAKERINKLL 537
F++MI+ GI P TY + + E+ R+ +A+ I +++
Sbjct: 444 IFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMV 484
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/306 (20%), Positives = 126/306 (41%), Gaps = 24/306 (7%)
Query: 164 YNTMVDVLGKSKKF----CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
++ ++D L K +K + LVK+ ++N ++++ L + G+ D A E
Sbjct: 320 FSVLIDALCKREKVEEAQLFLGSLVKKGVKVNE-----VVYTSLIDGLCKTGKIDAADEL 374
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE--FKDCIPLSSQIFNILIHGWC 277
+ M G D + S L+D L + + A + LE + I S + I+I
Sbjct: 375 MQKMISEGFVPDAHSYSSLIDGLCRQKKLSQA-TLMLEDMMEKGIQASPVTYTIIIDELV 433
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ + +K +M G +PD+V+YT F+ YC E + + +M ++G P+++
Sbjct: 434 REVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSK------------AG 385
TY ++ +++A +E M P+ Y+ L+ ++ K
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIA 553
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+KD + ED+ ++ + Y+ I C E A M+ P + Y
Sbjct: 554 DMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYT 613
Query: 446 PLLKMC 451
++ C
Sbjct: 614 SIIDCC 619
>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic [Vitis vinifera]
gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 141 bits (356), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 93/328 (28%), Positives = 174/328 (53%), Gaps = 17/328 (5%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELV 184
NSL++ L+ ++ A+G F K TP++ YN +D LGKS K +++L
Sbjct: 792 NSLIDGLLKARLTEM--AWGLFYKMKNAG---CTPDVFTYNLFLDALGKSGKIKELFDLY 846
Query: 185 KEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
+EM + T + ++ LV+ D A++ + + L+D L+K
Sbjct: 847 EEM-LFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLK 905
Query: 245 GNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
+E A + F E D C+P + ++NIL++G+ K V+ A + + M ++G PD+
Sbjct: 906 LGRLEEAKQFFEEMLDYGCMP-NCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLK 964
Query: 303 SYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
SY+ ++ C KVDD L +E++ G P ++ Y ++++ LG+++++ EAL ++
Sbjct: 965 SYSIMVDCLCM---VGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLF 1021
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
++M++ PD Y++LI L AG V++A +++E+++ +G+ PNV TYN +I
Sbjct: 1022 DEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMS 1081
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPL 447
+ A + +KM C+P+ T+A L
Sbjct: 1082 GNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 147/290 (50%), Gaps = 2/290 (0%)
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQK 287
+D L L+ L K AY VFL+ CI S + +N LI G K R + A
Sbjct: 750 EDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWG 809
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+M G +PDV +Y F++ + +++ D +EM +GCKP+ IT+ IV+ L
Sbjct: 810 LFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLV 869
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
K+ +++A+ +Y + S D P Y LI L K GR+++A + FE+M G +PN
Sbjct: 870 KSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCP 929
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
YN +++ + + E A +L ++M ++ +PD ++Y+ ++ C ++ +
Sbjct: 930 LYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEEL 989
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + D Y ++ GL S ++E A S F+EM ++GI P TY L
Sbjct: 990 KLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNAL 1039
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 178/390 (45%), Gaps = 37/390 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+ ++ LGK + + L++EM+ L ++ T + +R L R G+ D+A + M
Sbjct: 230 YSALMVALGKRRDIETVMGLLQEMESLGL-RPNIYTFTICIRILGRAGKIDEAYGILKRM 288
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------------------------ 259
G D +VL+D L + +A ++FL+ K
Sbjct: 289 DDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDL 348
Query: 260 ------------DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
D F ILI CK KVD+A + M +QG +P++ +Y
Sbjct: 349 DAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTL 408
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I R + + M+ G + + TY + + GK+ + +A+K +EKMK++
Sbjct: 409 ICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGI 468
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
+P+ ++ ++ L++ GR+++A E F +KK G+ P+ +TYN ++ ++A+K
Sbjct: 469 VPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIK 528
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
LL +MEE+ C P+ L+ + R+ + M + ++ TY +L+ GL
Sbjct: 529 LLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLG 588
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ G+++ A + F+ MI+ P ++ L
Sbjct: 589 KEGRVQEATALFKGMIADDCPPNTISFNTL 618
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 190/391 (48%), Gaps = 12/391 (3%)
Query: 159 HTPE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDD 215
H P+ Y T++D + E EM+ +GY+ + T + ++ L + G+ D+
Sbjct: 328 HKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEA--DGYLPDVVTFTILIDALCKVGKVDE 385
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIH 274
A MKK GV + + L+ L++ N ++ A ++F + + ++ + + I
Sbjct: 386 AFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFID 445
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
+ K+ + A K ++M G P++V+ + + + + +++ G P
Sbjct: 446 YYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAP 505
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
ITY I+M GKA ++++A+K+ +M+ + C P+ +SLI L KA RV +A ++F
Sbjct: 506 DAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMF 565
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
+ MK+ + P V+TYNT+++ + A L + M D C P+ ++ LL C+
Sbjct: 566 QRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKN 625
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP-YHST 513
+ + +L M + + D TY +++ GLI+ ++ A F +M K I P Y +
Sbjct: 626 GEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTL 684
Query: 514 YKMLEEKLEKKRLGN----AKERINKLLAHA 540
+L ++ R+ + AKE ++ + HA
Sbjct: 685 CTLLPGVIKDGRIEDAFRVAKEFVHHVGDHA 715
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 111/418 (26%), Positives = 191/418 (45%), Gaps = 10/418 (2%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWEL 183
++S+ V + L+ S D AF FF +HT E N ++++L ++ + ++
Sbjct: 86 TMSSEEVYRVLKSIS-DPNQAFSFFNSVAEMPRVIHTTETCNYVLEMLRAHRR---VEDM 141
Query: 184 VKEMDELNNGYV--SLATMSTIMRRL-VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMD 240
V + + + S+ T TI + L +RGG + V A M+K G + + L+
Sbjct: 142 VVVFNLMQKQIIKRSINTYLTIFKVLYIRGGLREAPV-ALEKMRKVGFVLNGYSYIGLIH 200
Query: 241 TLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSP 299
L+K A KV+ + I S + ++ L+ K R ++ ++EM G P
Sbjct: 201 LLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRP 260
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
++ ++T I R + LK M + GC P V+TYT+++ AL A ++N A +++
Sbjct: 261 NIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELF 320
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
KMK+ PD Y +L+ S G + E + +M+ G +P+V+T+ +I + C
Sbjct: 321 LKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKV 380
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
+ + A L M++ P+ TY L+ R R+ L M + A TY
Sbjct: 381 GKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTY 440
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVP-YHSTYKMLEEKLEKKRLGNAKERINKL 536
+ +SG+ A FE+M + GIVP + L E+ RL AKE N L
Sbjct: 441 ILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGL 498
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 172/352 (48%), Gaps = 19/352 (5%)
Query: 114 VVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFF-----------TWAKTQTGYMHTP- 161
++EA G + + SLV T+ + L P F + K + TP
Sbjct: 728 LIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPS 787
Query: 162 -EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEA 219
E YN+++D L K++ + W L +M N G + T + + L + G+ + +
Sbjct: 788 LEAYNSLIDGLLKARLTEMAWGLFYKMK--NAGCTPDVFTYNLFLDALGKSGKIKELFDL 845
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWC 277
+ M G + +T ++++ LVK NS++ A ++ + D P + + LI G
Sbjct: 846 YEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSP-TPWTYGPLIDGLL 904
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
K ++++A++ +EM G P+ Y + + ++ D + + M ++G +P +
Sbjct: 905 KLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLK 964
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
+Y+I++ L ++++AL +E++K PD Y+ +I L ++ RV++A +F++M
Sbjct: 965 SYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEM 1024
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
+ +G+ P++ TYN +I + E A K+ ++++ +P+ TY L++
Sbjct: 1025 RNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIR 1076
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/361 (22%), Positives = 159/361 (44%), Gaps = 5/361 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+NT++D L K+ + L +++ M E+N + + T +T++ L++ R + A F M
Sbjct: 615 FNTLLDCLCKNGEVDLALKMLFRMTEMNC-FPDVLTYNTVIYGLIKENRVNYAFWLFHQM 673
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIP--LSSQIFNILIHGWCKTRK 281
KK + D L L+ ++K +E A++V EF + + L+ G +
Sbjct: 674 KKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAE 732
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC-KPSVITYT 340
+ + + + D ++ C+ + ++ + C PS+ Y
Sbjct: 733 IGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYN 792
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ L KA+ A ++ KMK+ C PD Y+ + L K+G++K+ +++E+M +
Sbjct: 793 SLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFR 852
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G PN +T+N +I + + A+ L + P TY PL+ + R++
Sbjct: 853 GCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEA 912
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEK 520
M + Y L+ G + G +E AC F M+ +GI P +Y ++ +
Sbjct: 913 KQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDC 972
Query: 521 L 521
L
Sbjct: 973 L 973
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 169/408 (41%), Gaps = 50/408 (12%)
Query: 161 PE--MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVE 218
PE + N+++D L K+ + W++ + M E+ ++ T +T++ L + GR +A
Sbjct: 540 PEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLA-PTVVTYNTLLAGLGKEGRVQEATA 598
Query: 219 AFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGW 276
F+GM +T + + L+D L K V+ A K+ +C P +N +I+G
Sbjct: 599 LFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFP-DVLTYNTVIYGL 657
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE----KGC 332
K +V+ A +M ++ PD V+ + ++ +++D + +E G
Sbjct: 658 IKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDG---RIEDAFRVAKEFVHHVGD 713
Query: 333 KPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANE 392
+ +M + +I +++ E + + D S L+ L K G+ DA
Sbjct: 714 HADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYN 773
Query: 393 IFEDMKKQ-GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+F + K + P++ YN++I E A L KM+ C PD TY L
Sbjct: 774 VFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDAL 833
Query: 452 CRKKRMKVLNFL-------------LTH----------------------MFKNDVSMDA 476
+ ++K L L +TH + D S
Sbjct: 834 GKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTP 893
Query: 477 GTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
TY L+ GL++ G+LE A FFEEM+ G +P Y +L K+
Sbjct: 894 WTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQ 941
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 183/400 (45%), Gaps = 20/400 (5%)
Query: 145 FGFFTW--AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST 202
F FFTW + + + HT Y TM+ L + L++ + + A +T
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVFAT 60
Query: 203 IMRR-----------------LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
I+ + G DA+E +R +++ + +++ L+K
Sbjct: 61 ILETKGTQRSDIYVLSGLITAYLESGFLRDAIECYRLTREHKLWVPFDTCRKVLEHLMKL 120
Query: 246 NSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+ + + E +C P S FNIL+H +CK + AQ + + G P VVSY
Sbjct: 121 KYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSY 180
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ Y R D + M G +P V TY+++++ L K ++++A +++++M
Sbjct: 181 NTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLV 240
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
+P+ +++LI K GRV A EI++ M Q ++P+++TYNT+I + + +
Sbjct: 241 KGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQ 300
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A L+ +M KPD TY L+ CC++ + M + ++ +D Y +L+
Sbjct: 301 AHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALIS 360
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
GL + G+ A EM+S G+ P TY M+ + KK
Sbjct: 361 GLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKK 400
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 126/255 (49%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G ++ M GV+ D SVL++ L K + ++ A ++F
Sbjct: 176 SVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF 235
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K IP + F LI G CK +VD A + K+M Q PD+++Y I +
Sbjct: 236 DEMLVKGLIP-NGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXK 294
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ D + EM KG KP TY ++ K ++ A + ++M ++ D
Sbjct: 295 KGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 354
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ +M G+ P+ TY +I+ C + + KLL++M+
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 434 EDLCKPDCETYAPLL 448
D P TY L+
Sbjct: 415 RDGHVPSVVTYNVLM 429
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 145/317 (45%), Gaps = 4/317 (1%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W +E+ L GY SL + +M R + G A F + K+G+
Sbjct: 117 LMKLKYFKLVWGFYEEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLR 174
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKV-FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKA 288
+ + LM+ ++ + +++ + +++LI+G CK K+DDA +
Sbjct: 175 PSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANEL 234
Query: 289 MKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK 348
EM +G P+ V++T I+ +C+ + K+M + P +ITY +++ L K
Sbjct: 235 FDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXK 294
Query: 349 AKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
+ +A + ++M PD Y +LI K G + A E + M ++ + + +
Sbjct: 295 KGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVA 354
Query: 409 YNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
Y +IS C +A K+L++M KPD TY ++ C+K + + LL M
Sbjct: 355 YTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 469 KNDVSMDAGTYASLVRG 485
++ TY L+ G
Sbjct: 415 RDGHVPSVVTYNVLMNG 431
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 39/282 (13%)
Query: 69 LAGWVESHRLNEKSRISSRVLSENHETDVDKISKI---LSKQYQSPDKVVEALKGCGVSV 125
+ G++ LNE R+ S +L+ + DV S + L K+ + D
Sbjct: 184 MNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDD------------- 230
Query: 126 SNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVK 185
+N L ++ L + G + + T++D K+ + L E+ K
Sbjct: 231 ANELFDEMLVK-------------------GLIPNGVTFTTLIDGHCKNGRVDLAMEIYK 271
Query: 186 EMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
+M L+ + L T +T++ L + G A + M G++ D L+D K
Sbjct: 272 QM--LSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCK 329
Query: 245 GNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
++ A++ ++ I L + LI G C+ + DA+K ++EM G PD +
Sbjct: 330 EGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDDRT 389
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHA 345
YT I +C++ D K LKEMQ G PSV+TY ++M+
Sbjct: 390 YTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 176/366 (48%), Gaps = 11/366 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
+N ++ + +S K + EM L G ++ T +T+M + + + A A RG
Sbjct: 247 FNMLMRDMIRSGKLASARNMFDEM--LRRGVPPTVVTFNTLMSGMCKASDLNSA-NALRG 303
Query: 223 -MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIHGWCKTR 280
M K GV D M L K ++ A ++F E ++ + ++ +F LI CK
Sbjct: 304 LMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEG 363
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
V + +EM +G D+V+Y CR +D + +D ++EM+ G KP +TYT
Sbjct: 364 NVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYT 423
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
++ K +++ A+++ ++M + D Y++LI LSK+GR D+ I +M +
Sbjct: 424 TLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEA 483
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+ TY +I + C S+ + KLL++M+ KP TY ++ C +MK
Sbjct: 484 GLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNA 543
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS-KGIVPYHSTYKMLEE 519
+ LL M V D TY L+ G + GK+ A EE+ S KG+V Y L
Sbjct: 544 DMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDA----EELKSAKGMVSDFGLYTSLIN 599
Query: 520 KLEKKR 525
+ KK+
Sbjct: 600 EFVKKK 605
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 147/294 (50%), Gaps = 4/294 (1%)
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVD 283
+ GV A S LM+ L SV AY +L+ D +P ++ FN+L+ ++ K+
Sbjct: 205 RRGVRVPLPAWSDLMNRL---PSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLA 261
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
A+ EM ++G P VV++ + C+ D + M + G P V TY M
Sbjct: 262 SARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFM 321
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
L KA +I +A++++E+M+ P+T +++LI K G V E+ +M +G+
Sbjct: 322 QGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIK 381
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
+++ YN + + C + + A ++++M + KPD TY L+ C++ + + +
Sbjct: 382 TDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEM 441
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
M V++D TY +L+ GL +SG+ + EM+ G+ P ++TY M+
Sbjct: 442 KQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMV 495
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 152/324 (46%), Gaps = 4/324 (1%)
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
V L S +M RL +A + + GV + + ++LM +++ + A +
Sbjct: 210 VPLPAWSDLMNRLPS---VPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNM 266
Query: 255 FLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
F E + +P + FN L+ G CK ++ A M + G +PDV +Y F++ C+
Sbjct: 267 FDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCK 326
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ + +EM+E+G P+ + +T ++ A K + L+++ +M + D
Sbjct: 327 AGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVA 386
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++L L + +K AN+I E+M+ G+ P+ +TY T+I C E + A+++ Q+M
Sbjct: 387 YNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMS 446
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
++ D TY L+ + R +L M + + D TY ++ ++ ++
Sbjct: 447 DEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVIDAFCKNSDVK 506
Query: 494 LACSFFEEMISKGIVPYHSTYKML 517
+EM +KG P TY ++
Sbjct: 507 TGFKLLKEMQNKGRKPGVVTYNVV 530
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 112/243 (46%)
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
++ G P+ + + R + EM +G P+V+T+ +M + KA
Sbjct: 234 QLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKAS 293
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYN 410
+N A + M PD Y + + L KAGR++DA E+FE+M+++GV PN + +
Sbjct: 294 DLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFT 353
Query: 411 TMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKN 470
T+I + C L+L ++M K D Y L CR + +K N ++ M N
Sbjct: 354 TLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNN 413
Query: 471 DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
+ D TY +L+ G + G+L++A +EM +G+ TY L L K
Sbjct: 414 GLKPDKVTYTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDS 473
Query: 531 ERI 533
ERI
Sbjct: 474 ERI 476
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 91/196 (46%), Gaps = 3/196 (1%)
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+G + + ++ +M+ L + EA Y ++ P+ ++ L+ + ++G++
Sbjct: 206 RGVRVPLPAWSDLMNRL---PSVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLAS 262
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A +F++M ++GV P V+T+NT++S C S+ +A L M + PD TY ++
Sbjct: 263 ARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQ 322
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
C+ R++ + M + V+ + + +L+ + G + EM ++GI
Sbjct: 323 GLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKT 382
Query: 510 YHSTYKMLEEKLEKKR 525
Y L L + R
Sbjct: 383 DLVAYNALANGLCRVR 398
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 93/315 (29%), Positives = 158/315 (50%), Gaps = 15/315 (4%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV----- 195
++ A+G F+ T G Y+T++ FC+ +L + + LN +
Sbjct: 215 VSEAYGLFS-EMTVKGISADVVTYSTLI------YGFCIEGKLKEAIGLLNEMVLKTINP 267
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T + ++ L + G+ +A M K V+ D S LMD V+ A VF
Sbjct: 268 NVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVF 327
Query: 256 --LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ P + ILI+G+CK + VD+A KEM Q+ P +V+Y+ I+ C+
Sbjct: 328 NAMSLMGVTP-DVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
V D + EM+++G VITY+ ++ L K ++ A+ ++ KMK + P+
Sbjct: 387 SGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
++ L+ L K GR+KDA E+F+D+ +G NV TYN MI+ C + E AL +L KME
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKME 506
Query: 434 EDLCKPDCETYAPLL 448
++ C P+ T+ ++
Sbjct: 507 DNGCIPNAFTFETII 521
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 114/495 (23%), Positives = 215/495 (43%), Gaps = 53/495 (10%)
Query: 86 SRVLSENHETDVDKISKILS-----KQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSND 140
+R+L H + + +KIL K Y + + L+ G+ + + F +
Sbjct: 48 NRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHM 107
Query: 141 LTPAFGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMD----ELNNGY- 194
FGF AK + GY NT++ K CL ++ K + L G+
Sbjct: 108 GQITFGFSVLAKILKRGYPPDTVTLNTLI------KGLCLKGQVKKALHFHDKLLAQGFQ 161
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
++ + +T++ + + G A++ R + + + S ++D L K V AY +
Sbjct: 162 LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGL 221
Query: 255 FLE-------------------------FKDCIPLSSQI-----------FNILIHGWCK 278
F E K+ I L +++ +NIL+ CK
Sbjct: 222 FSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
KV +A+ + M + PDV++Y+ ++ Y + +K M G P V T
Sbjct: 282 EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHT 341
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
YTI+++ K K ++EAL ++++M + +P YSSLI L K+GR+ ++ ++M+
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMR 401
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
+G +V+TY+++I C + A+ L KM++ +P+ T+ LL C+ R+K
Sbjct: 402 DRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLK 461
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
+ + ++ TY ++ G + G LE A + +M G +P T++ +
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETII 521
Query: 519 EKLEKKRLGNAKERI 533
L KK + E++
Sbjct: 522 IALFKKDENDKAEKL 536
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 96/343 (27%), Positives = 162/343 (47%), Gaps = 2/343 (0%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T++T+++ L G+ A+ + G + + + + L++ + K A K+ +
Sbjct: 130 VTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRK 189
Query: 258 FKDCIPLSS-QIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
+ + ++++ +I CK + V +A EM +G S DVV+Y+ I +C E
Sbjct: 190 IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGK 249
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
++ L EM K P+V TY I++ AL K ++ EA V M PD YS+
Sbjct: 250 LKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
L+ VK A +F M GV P+V TY +I+ C + AL L ++M +
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
P TY+ L+ C+ R+ + L+ M D TY+SL+ GL ++G L+ A
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI 429
Query: 497 SFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLA 538
+ F +M + I P T+ +L + L K RL +A+E LL
Sbjct: 430 ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLT 472
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 119/252 (47%), Gaps = 2/252 (0%)
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
+ VDDA M +P ++ + ++ + + K + ++ KG +P +IT
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
I+++ QI V K+ PDT ++LI L G+VK A + +
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
QG N ++Y T+I+ C + A+KLL+K++ L KP+ E Y+ ++ C+ + +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L + M +S D TY++L+ G GKL+ A EM+ K I P TY +L +
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 520 KLEKKRLGNAKE 531
L K+ G KE
Sbjct: 278 ALCKE--GKVKE 287
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 142/315 (45%), Gaps = 3/315 (0%)
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNI 271
DDAV F M + ++D+ K A + LE K P NI
Sbjct: 41 DDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQP-DLITLNI 99
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI+ +C ++ + ++ ++G+ PD V+ I+ C + +K ++ +G
Sbjct: 100 LINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG 159
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+ + ++Y +++ + K A+K+ K+ P+ YS++I L K V +A
Sbjct: 160 FQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAY 219
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+F +M +G+ +V+TY+T+I C + + A+ LL +M P+ TY L+
Sbjct: 220 GLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDAL 279
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++ ++K +L M K V D TY++L+ G +++ A F M G+ P
Sbjct: 280 CKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDV 339
Query: 512 STYKMLEEKLEKKRL 526
TY +L K ++
Sbjct: 340 HTYTILINGFCKNKM 354
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 97/210 (46%), Gaps = 5/210 (2%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T + ++ + D+A+ F+ M + + S L+D L K + + + + E
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400
Query: 259 KD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+D P ++ LI G CK +D A +M Q P++ ++T ++ C+
Sbjct: 401 RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRL 460
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + +++ KG +V TY ++++ K + EAL + KM+ + C+P+ + ++
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETI 520
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
I L K KD N+ E + +Q + +L
Sbjct: 521 IIALFK----KDENDKAEKLLRQMIARGLL 546
>gi|359487102|ref|XP_002274044.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 390
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 94/327 (28%), Positives = 156/327 (47%), Gaps = 21/327 (6%)
Query: 124 SVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWEL 183
S +S V QTL ++ND A FF W +TQ G+ HT + YN M+D+LGK +F L+W L
Sbjct: 51 SFDHSTVRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFFEFDLIWVL 110
Query: 184 VKEMDELNNGYVSLATMSTIMRR---------LVRG----GRYDDAVEAFRGMKKYGVEK 230
++ M Y + T + +R ++RG G + E + M + GV K
Sbjct: 111 IQRMKADPVAYPNHVTFRFVFKRYAAAHLVEEILRGWFKMGWWKKCREFWEEMDRRGVCK 170
Query: 231 DTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ S+ MD K A K++ E K I L +N +I + VD + +
Sbjct: 171 SLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAIGLSEGVDFSIRVF 230
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
+EM + G P+VV+Y I+ C R+ +M+EKG P+VITY + K
Sbjct: 231 REMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNVITYHCFFGCIEKP 290
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
KQI L+ +++M + P Y L+ + G ++ +++ M++QG P+ Y
Sbjct: 291 KQI---LRTFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKKMEEQGCSPDACAY 347
Query: 410 NTMISSACARSEEENALKLLQKMEEDL 436
N +I + ++ + L +K EE++
Sbjct: 348 NALIDALV----QKGMVDLARKYEEEM 370
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 128/236 (54%), Gaps = 3/236 (1%)
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++ GW K ++ +EM ++G + SY+ +++ C+ + KEM++KG
Sbjct: 143 ILRGWFKMGWWKKCREFWEEMDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKG 202
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
+ V+ Y V+ A+G ++ ++ +++V+ +MK C P+ Y+++I +L + GR+++A
Sbjct: 203 IRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAY 262
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+F+ M+++G PNV+TY+ + + L+ +M +P +TY L+K
Sbjct: 263 GVFDQMREKGYAPNVITYHCFFGCI---EKPKQILRTFDRMINSGVRPRMDTYVMLMKKF 319
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
R ++ + + M + S DA Y +L+ L++ G ++LA + EEM++KG+
Sbjct: 320 GRWGFLRPVFIVWKKMEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAKGL 375
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/246 (20%), Positives = 101/246 (41%), Gaps = 49/246 (19%)
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ-EKGCKPSVITYTIVMHALGKAKQI 352
Q GF+ +Y I+ + +F + ++ M+ + P+ +T+ V A +
Sbjct: 81 QCGFNHTTDTYNGMIDILGKFFEFDLIWVLIQRMKADPVAYPNHVTFRFVFKRYAAAHLV 140
Query: 353 NEALK-------------VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
E L+ +E+M YS + I K+G+ A +++++MKK
Sbjct: 141 EEILRGWFKMGWWKKCREFWEEMDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKK 200
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+G+ +V+ YNT+I + + ++++ ++M+E C+P+ TY ++K+ C
Sbjct: 201 KGIRLDVVAYNTVIRAIGLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLC------- 253
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
E+G++ A F++M KG P TY
Sbjct: 254 ----------------------------ENGRIREAYGVFDQMREKGYAPNVITYHCFFG 285
Query: 520 KLEKKR 525
+EK +
Sbjct: 286 CIEKPK 291
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 143/271 (52%), Gaps = 4/271 (1%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+NI+I G+CK R ++ A ++EM + G P +Y+ ++ +C+ + K D EM
Sbjct: 47 YNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMP 106
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
KGC+P ++ + +++ L +A++I+EA +++ M S C PD Y+++I L K ++
Sbjct: 107 AKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLD 166
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A + E MK++ V P +TY T+I C + + A ++ +KM E C Y+ L
Sbjct: 167 EAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLF 226
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL--IESGKLELACSFFEEMISKG 506
R ++ + + + M + +V M TY+ +V GL ++ G +E A EM+ K
Sbjct: 227 NKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVE-AAKLVTEMMGKK 285
Query: 507 IVPYHSTYKMLEEKLEK-KRLGNAKERINKL 536
I P Y +L L K +R G AKE ++
Sbjct: 286 IAPDFYAYSILINGLCKARRPGEAKEMFQEM 316
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 184/402 (45%), Gaps = 44/402 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN ++D K++ ++EM+EL + A S+I++ + G A++ F M
Sbjct: 47 YNIIIDGYCKARNIEKALAFLREMEELGHPPTPHA-YSSIVQSFCKTGNVSKAMDVFAEM 105
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
G E D +VL+ L + + A ++F + + C P +N +I G CK +K
Sbjct: 106 PAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKP-DVVTYNTMIAGLCKWKK 164
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D+A ++ M Q+ SP V+YT I+H C+ ++ + ++M E C + Y++
Sbjct: 165 LDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSV 224
Query: 342 VMHALGKAKQINEALKVYEKM-KSDDCLPDTSF--------------------------- 373
+ + L +A ++ EA +VY M + + C+ D ++
Sbjct: 225 LFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGK 284
Query: 374 --------YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
YS LI L KA R +A E+F++M+ +G+ P V+TYNT++ + ++ ++A
Sbjct: 285 KIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDA 344
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
++L M + PD +Y +++ C L M K+ + ++ TY ++ G
Sbjct: 345 MELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVG 404
Query: 486 LIESGKLELACSFFEEMIS----KGIVPYHSTYKMLEEKLEK 523
I+ A F+ M S K P TY++L L K
Sbjct: 405 FIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCK 446
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 137/263 (52%), Gaps = 1/263 (0%)
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
++N LI CK + +A+ +K M Q +P+VVSY I+ YC+ ++ K L+EM
Sbjct: 12 LYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARNIEKALAFLREM 70
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+E G P+ Y+ ++ + K +++A+ V+ +M + C PD ++ L+ L +A ++
Sbjct: 71 EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKI 130
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+A E+F M +G P+V+TYNTMI+ C + + A+ LL++M+++ P TY L
Sbjct: 131 HEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTL 190
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C+ R++ + M + + Y+ L L +GKL A + +M K +
Sbjct: 191 IDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNV 250
Query: 508 VPYHSTYKMLEEKLEKKRLGNAK 530
+TY ++ L K GN +
Sbjct: 251 CMTDNTYSLVVLGLSKMDGGNVE 273
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 95/395 (24%), Positives = 168/395 (42%), Gaps = 42/395 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNTM+ L K KK L++ M + + + T +T++ L + R A E F M
Sbjct: 152 YNTMIAGLCKWKKLDEAVFLLERMKQ-EDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKM 210
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKV 282
+ A SVL + L + + A +V+ + + + ++ +++++ G K
Sbjct: 211 AEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGG 270
Query: 283 D-DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ +A K + EM + +PD +Y+ I C+ + + + +EM+ +G P+V+TY
Sbjct: 271 NVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNT 330
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ L ++ +A+++ M LPDT Y+ +I G +A +F+DM K G
Sbjct: 331 LLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDG 390
Query: 402 VV---------------------------------------PNVLTYNTMISSACARSEE 422
+V PN+ TY +ISS C +
Sbjct: 391 IVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSGKNDKVPAPNMFTYEILISSLCKTDQV 450
Query: 423 ENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
E A KLL M + P + + LL R R+ L M + + G+ L
Sbjct: 451 EEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNIL 510
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ G++ G ++ A F ++M GIVP TY L
Sbjct: 511 LDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKL 545
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 146/305 (47%), Gaps = 15/305 (4%)
Query: 236 SVLMDTLVKGNSVEHAYKVFLEFKDCI-PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQ 294
++++D K ++E A E ++ P + ++ ++ +CKT V A EM
Sbjct: 48 NIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPA 107
Query: 295 QGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINE 354
+G PD+V++ + R + + + + M +GCKP V+TY ++ L K K+++E
Sbjct: 108 KGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDE 167
Query: 355 ALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMIS 414
A+ + E+MK +D P Y++LI L K R++ A E+FE M + Y+ + +
Sbjct: 168 AVFLLERMKQEDVSPTFVTYTTLIDHLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFN 227
Query: 415 SACARSEEENALKLLQ--KMEEDLCKPD-CETYAPLLKMCCRKKRMKVLNF----LLTHM 467
+ A KL++ ++ D+C+ + C T + +M N L+T M
Sbjct: 228 KL------QRAGKLVEASRVYSDMCRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLVTEM 281
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEKLEKKRL 526
++ D Y+ L+ GL ++ + A F+EM +GI P TY +LE L +L
Sbjct: 282 MGKKIAPDFYAYSILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKL 341
Query: 527 GNAKE 531
+A E
Sbjct: 342 QDAME 346
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 68/296 (22%), Positives = 142/296 (47%), Gaps = 10/296 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+ +++ L K+++ E+ +EM G ++ T +T++ L+ + DA+E
Sbjct: 293 YSILINGLCKARRPGEAKEMFQEMR--GRGISPTVVTYNTLLEGLLSTAKLQDAMELTYF 350
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M G DT + ++++ AY +F + KD I L++ +N +I G+ K
Sbjct: 351 MLDQGRLPDTCSYNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEA 410
Query: 282 VDDAQKAMKEMFQQG-----FSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
A K M Q G +P++ +Y I C+ + L M++KG PS+
Sbjct: 411 WSSAWMLFKRM-QSGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSL 469
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+ +++ L +A ++++A ++Y++M +C + L+ + + G V +A + +
Sbjct: 470 KIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQ 529
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC 452
M G+VP+ TY+ ++ C + + + A KL++++ D +P+ + LL C
Sbjct: 530 MTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALC 585
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 1/129 (0%)
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M + G+ PN + YN +IS C A L++M + C P+ +Y ++ C+ +
Sbjct: 1 MLEAGLFPNAILYNNLISCLCKAGMLAEAESYLKRMPQH-CAPNVVSYNIIIDGYCKARN 59
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKM 516
++ L M + Y+S+V+ ++G + A F EM +KG P + +
Sbjct: 60 IEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNV 119
Query: 517 LEEKLEKKR 525
L L + R
Sbjct: 120 LLSGLWRAR 128
>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
Length = 650
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/370 (25%), Positives = 179/370 (48%), Gaps = 6/370 (1%)
Query: 159 HTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDD 215
H P++ NT+V+ L + +L+ M + NG + T I+ R+ + G
Sbjct: 191 HVPDLITLNTIVNGLCLKDRVSEAVDLIARM--MANGCQPNQFTYGPILNRMCKSGNTAS 248
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIFNILIH 274
A++ R M+ ++ ++++D L K ++ A F E + I + +N LI
Sbjct: 249 ALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIG 308
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
+C + DD + +++M + +P+VV+++ I+ +E + D EM +G +P
Sbjct: 309 SFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEP 368
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+ ITY +++ L K+++EA ++ + M S C PD Y+ LI KA +V D +F
Sbjct: 369 NTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLF 428
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
M +G++ + +TY+T+I C + A K+ Q+M P TYA LL C
Sbjct: 429 RKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDN 488
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ +L M K + +D G Y ++ G+ + K++ A S F + SKG+ +Y
Sbjct: 489 GELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSY 548
Query: 515 KMLEEKLEKK 524
++ L K+
Sbjct: 549 NIMLSGLCKR 558
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/300 (28%), Positives = 152/300 (50%), Gaps = 4/300 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV- 254
++ T S ++ LV+ G+ +A + + M G+E +T + L+ L ++ A ++
Sbjct: 334 NVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMM 393
Query: 255 -FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ K C P +NILI+G+CK ++VDD + ++M +G D V+Y+ I+ +C+
Sbjct: 394 DLMVSKGCDP-DIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQ 452
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ +EM +G P ++TY I++ L ++ EAL + ++M D
Sbjct: 453 SRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGI 512
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ +I + A +V DA +F + +GV ++ +YN M+S C RS A L +KM+
Sbjct: 513 YNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMK 572
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
ED +PD TY L++ R + L+ M + S DA T +V ++ SG+L+
Sbjct: 573 EDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDAST-VKIVMDMLSSGELD 631
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 151/323 (46%), Gaps = 3/323 (0%)
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T + I+ L + GR DDA+ F M+ G++ + + L+ + + ++
Sbjct: 265 VVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLR 324
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ + P + F+ LI K K+ +A+ EM +G P+ ++Y I C +
Sbjct: 325 DMITRKITP-NVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCND 383
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
K + + + M KGC P + TY I+++ KAKQ+++ ++++ KM + DT Y
Sbjct: 384 KRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTY 443
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
S+LI ++ ++ A ++F++M QGV P ++TY ++ C E E AL +L +M +
Sbjct: 444 STLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHK 503
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+ D Y ++ C ++ L + V D +Y ++ GL + L
Sbjct: 504 CKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSE 563
Query: 495 ACSFFEEMISKGIVPYHSTYKML 517
A + F +M G P TY L
Sbjct: 564 ADALFRKMKEDGYEPDGCTYNTL 586
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 146/312 (46%), Gaps = 1/312 (0%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLS 265
L R +YD + + M+ G+ D L+++++ + + A+ + FK +
Sbjct: 100 LARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPN 159
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+ FN L++G C +V +A + + M PD+++ + C + + D +
Sbjct: 160 TVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIA 219
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
M GC+P+ TY +++ + K+ AL + KM+ P Y+ +I L K G
Sbjct: 220 RMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDG 279
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
R+ DA F +M+ +G+ NV TYN++I S C+ ++ +LL+ M P+ T++
Sbjct: 280 RLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFS 339
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
L+ ++ ++ L M + + TY SL+ GL +L+ A + M+SK
Sbjct: 340 ALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSK 399
Query: 506 GIVPYHSTYKML 517
G P TY +L
Sbjct: 400 GCDPDIWTYNIL 411
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 130/286 (45%), Gaps = 2/286 (0%)
Query: 263 PLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
PL + I FN L +T++ D K+M +G + D+ + I +CR +
Sbjct: 86 PLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAF 145
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ ++ + G +P+ +T+ +++ L ++ EA+++ + M +PD ++++ L
Sbjct: 146 SAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGL 205
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
RV +A ++ M G PN TY +++ C +AL LL+KME KP
Sbjct: 206 CLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHV 265
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY ++ C+ R+ + M + + TY SL+ G+ + +
Sbjct: 266 VTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRD 325
Query: 502 MISKGIVPYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAKEQKTF 546
MI++ I P T+ L + L K+ +L AK+ N+++ E T
Sbjct: 326 MITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTI 371
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%)
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
K DDA + M + P V+ + R K + V K+M+ KG + T
Sbjct: 70 KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ + +++ A K+ P+T +++L+ L GRV +A E+ + M
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
VP+++T NT+++ C + A+ L+ +M + C+P+ TY P+L C+
Sbjct: 190 QHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTASA 249
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
LL M + TY ++ L + G+L+ A SFF EM +KGI TY L
Sbjct: 250 LDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSL 306
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 67/310 (21%), Positives = 132/310 (42%), Gaps = 43/310 (13%)
Query: 160 TPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDA 216
TP + ++ ++D L K K +L EM + G + T ++++ L R D+A
Sbjct: 332 TPNVVTFSALIDSLVKEGKLTEAKDLYNEM--ITRGIEPNTITYNSLIYGLCNDKRLDEA 389
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIH 274
+ M G + D ++L++ K V+ ++F + + I + ++ LI
Sbjct: 390 NQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIA-DTVTYSTLIQ 448
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF----------------- 317
G+C++RK+ A+K +EM QG P +++Y ++ C +
Sbjct: 449 GFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMEL 508
Query: 318 ---------------RKVDDTLK---EMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
KVDD + KG K + +Y I++ L K ++EA ++
Sbjct: 509 DIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALF 568
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
KMK D PD Y++LI + + + ++ E+MK+ G + T ++ +
Sbjct: 569 RKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSG 628
Query: 420 SEEENALKLL 429
+++ L +L
Sbjct: 629 ELDKSFLNML 638
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 170/366 (46%), Gaps = 24/366 (6%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++ K + F +L +EM L G + ++ T +TIM L R GR DA
Sbjct: 280 YNPLIRGFCKKEMFEEANDLRREM--LGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDV 337
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-----------FNI 271
M V +D LM LV N++ + Y F + + L S++ +N
Sbjct: 338 M----VNED------LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNT 387
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI G C+T +D A+ +M + G PDVV++T + +C+ + + EM +G
Sbjct: 388 LIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRG 447
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
KP I YT + K ++A + E+MK++ PD Y+ LI L K G DAN
Sbjct: 448 LKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDAN 507
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
E+ + M+ +G+VP+ +TY ++I + A ++ M + P TY L+
Sbjct: 508 ELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSY 567
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
+ R+ M VS + TY +L+ GL + +++A + F EM SKG+ P
Sbjct: 568 AVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNK 627
Query: 512 STYKML 517
TY +L
Sbjct: 628 YTYTIL 633
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 175/357 (49%), Gaps = 17/357 (4%)
Query: 190 LNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSV 248
+NNG + + + +++ L ++ E + M K + + +MD+ K V
Sbjct: 164 VNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEV 223
Query: 249 EHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTC 306
A +V + C P + +N+L++G + D A++ +++M G +Y
Sbjct: 224 GRAVEVLDVMRMFGCDP-NDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNP 282
Query: 307 FIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
I +C+++ F + +D +EM +G P+V+TY +M++L + ++++A + + M ++D
Sbjct: 283 LIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNED 342
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
+PD Y++LI+ S+ G +A +F +++ + +VP+V+TYNT+I C L
Sbjct: 343 LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGN----L 398
Query: 427 KLLQKMEEDLCK----PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASL 482
+ + M++D+ K PD T+ L++ C+ + + L M + D Y +
Sbjct: 399 DIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTR 458
Query: 483 VRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGN---AKERINKL 536
+ G ++ G A EEM ++G P TY +L L K LGN A E + K+
Sbjct: 459 IVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCK--LGNFDDANELVQKM 513
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 149/290 (51%), Gaps = 8/290 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM--DELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAF 220
YNT++D G + L ++ K M D + +G + T + ++R + G A E F
Sbjct: 385 YNTLID--GGCRTGNL--DIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELF 440
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKT 279
M G++ D A + + +K + A+ + E K + P +N+LI+G CK
Sbjct: 441 DEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKL 500
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
DDA + +++M +G PD V+YT I + RK ++ +M +KG PSV+TY
Sbjct: 501 GNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTY 560
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T+++H+ +++ A K +++M+ P+ Y++LI+ L K + A +F +M+
Sbjct: 561 TVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMES 620
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
+GV PN TY +I+ ++ALKL + M + KPD T++ L+K
Sbjct: 621 KGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMK 670
Score = 119 bits (297), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 164/357 (45%), Gaps = 6/357 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN +V+ L +F EL+++M L VS T + ++R + +++A + R M
Sbjct: 245 YNVLVNGLSGKGEFDRAKELIEQMSMLGLK-VSAHTYNPLIRGFCKKEMFEEANDLRREM 303
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHA--YKVFLEFKDCIP-LSSQIFNILIHGWCKTR 280
G + +M +L + V A Y + +D +P L S +N LI+G+ +
Sbjct: 304 LGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVS--YNTLIYGYSRLG 361
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+A E+ + P VV+Y I+ CR + +M + G P V+T+T
Sbjct: 362 NFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFT 421
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I++ + + A +++++M S PD Y++ I K G A + E+MK +
Sbjct: 422 ILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAE 481
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G P+++TYN +I+ C ++A +L+QKM + PD TY ++ ++
Sbjct: 482 GFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKA 541
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + M K + TY L+ G+L+ A +F+EM KG+ P TY L
Sbjct: 542 EEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNAL 598
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 82/183 (44%)
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
SV +++ K + + L V+ KM ++ LPD + ++ +L V + E++
Sbjct: 136 SVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVY 195
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
M K + P ++T+NTM+ S C E A+++L M C P+ +Y L+ K
Sbjct: 196 SVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGK 255
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
L+ M + + A TY L+RG + E A EM+ +G +P TY
Sbjct: 256 GEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTY 315
Query: 515 KML 517
+
Sbjct: 316 NTI 318
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 95/216 (43%), Gaps = 3/216 (1%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTI 203
AFG K + G+ YN +++ L K F ELV++M L T ++I
Sbjct: 471 AFGMKEEMKAE-GFPPDLITYNVLINGLCKLGNFDDANELVQKM-RLEGIVPDHVTYTSI 528
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CI 262
+ + G A E F M K G+ +VL+ + ++ A K F E +D +
Sbjct: 529 IHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGV 588
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
+ +N LI+G CK +D A EM +G SP+ +YT I + ++
Sbjct: 589 SPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALK 648
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKV 358
K+M ++ KP T++ +M L K ++ L++
Sbjct: 649 LYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLRL 684
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 163/329 (49%), Gaps = 5/329 (1%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMK--KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
S ++ + G DA+E FR + K+ V DT +++ +K + + +
Sbjct: 68 VFSGLITAYLESGFLHDALECFRLTREHKFWVPFDT--CRKVLEHFMKLKYFKSVWGFYK 125
Query: 257 EFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
E +C P S FNIL+H +CK ++ AQ E+ + G P VVS+ + Y R
Sbjct: 126 EILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLG 185
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
D + M G +P V TY+++++ L K ++N+A +++++M + +P+ ++
Sbjct: 186 DLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFT 245
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEED 435
+LI K G + A E +++M +QG P+++TYNT+I C + + A L+ +M
Sbjct: 246 TLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMK 305
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
KPD TY L+ C++ ++ M K ++ +D Y +L+ GL G+ A
Sbjct: 306 GLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGA 365
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
EM+S G+ P + TY M+ + KK
Sbjct: 366 EKMLREMLSVGLKPDNGTYTMIINEFCKK 394
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 126/242 (52%), Gaps = 3/242 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M G++ D SVL++ L K + + A ++F
Sbjct: 170 SVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELF 229
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E +P + F LI G CKT +D A +A KEM +QGFSPD+++Y I C+
Sbjct: 230 DEMIGNGLVP-NGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCK 288
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E D ++ D + EM KG KP ITYT ++ K + A K ++M ++ D
Sbjct: 289 EGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVA 348
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + G+ A ++ +M G+ P+ TY +I+ C + + + KLL++M+
Sbjct: 349 YTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQ 408
Query: 434 ED 435
D
Sbjct: 409 RD 410
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 131/276 (47%), Gaps = 1/276 (0%)
Query: 235 LSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMF 293
++LM K + A VF E K + S FN L++G+ + +D+ + M
Sbjct: 139 FNILMHRFCKEGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMH 198
Query: 294 QQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQIN 353
G PDV +Y+ I C+E ++ EM G P+ +T+T ++ K I+
Sbjct: 199 GSGIQPDVYTYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSID 258
Query: 354 EALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMI 413
A++ Y++M PD Y++LI+ L K G +K A ++ ++M +G+ P+ +TY T+I
Sbjct: 259 LAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 414 SSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVS 473
+C + E A K ++M ++ + D Y L+ CR+ + +L M +
Sbjct: 319 DGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLK 378
Query: 474 MDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
D GTY ++ + G +++ +EM G VP
Sbjct: 379 PDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVP 414
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 100/211 (47%), Gaps = 1/211 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE- 257
T S ++ L + + +DA E F M G+ + + L+D K S++ A + + E
Sbjct: 208 TYSVLINGLCKESKMNDANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEM 267
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ +N LI+G CK + AQ + EM +G PD ++YT I+ C+E D
Sbjct: 268 LRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDL 327
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
K M ++ + + YT ++ L + Q A K+ +M S PD Y+ +
Sbjct: 328 ETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREMLSVGLKPDNGTYTMI 387
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLT 408
I K G VK +++ ++M++ G VP V+T
Sbjct: 388 INEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418
>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
Length = 577
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 177/346 (51%), Gaps = 7/346 (2%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-K 259
+T++ + G+ D A E MK+ GV+ D S L+ L + ++ A + F +
Sbjct: 3 TTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE 62
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ-----GFSPDVVSYTCFIEHYCRE 314
+C P + +N +++G CK ++D+ + +M ++ G PDV+SY+ I+ C+
Sbjct: 63 ECSP-NVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKA 121
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ K + K M+ GC P+V+TY+ ++ L K +++EA + ++K +D +P +Y
Sbjct: 122 QRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYY 181
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
++++ + G+ + E+ MK++G N++ +N M+ + E+E A + +++ +
Sbjct: 182 NAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLK 241
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
KP+ TY + C+ ++ +L M ++ V+ D TY+S++ G ++G+++
Sbjct: 242 SGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDK 301
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHA 540
A F M+ +P+ T+ L + + R+++ + +A
Sbjct: 302 ADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA 347
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 179/367 (48%), Gaps = 7/367 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMD---ELNNGY-VSLATMSTIMRRLVRGGRYDDAVEA 219
YNT+V+ L K+ + EL +M+ E ++G + + ST++ L + R D A E
Sbjct: 71 YNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEY 130
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK--DCIPLSSQIFNILIHGWC 277
F+ M+ G + S L+D L K + V+ AY + ++ K D +P + +N +++G+
Sbjct: 131 FKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVP-RAMYYNAVVNGFK 189
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ K + + + M ++GF +++ + + + + K + + + G KP+V+
Sbjct: 190 RQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVV 249
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY + +H L KA +++EA ++ +M PD YSS+I KAGR+ A+++F M
Sbjct: 250 TYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM 309
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
+P+ +T+ T++ + A ++ + M P +TY L+ C +
Sbjct: 310 MVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSV 369
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ + M + DA TYA L++ L + +++ A F + M + +VP + L
Sbjct: 370 ESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHAL 429
Query: 518 EEKLEKK 524
E L K+
Sbjct: 430 VEVLCKQ 436
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 151/329 (45%), Gaps = 20/329 (6%)
Query: 209 RGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQ 267
R G+ + +E MK+ G + + ++ L K + E A + F K +
Sbjct: 190 RQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVV 249
Query: 268 IFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEM 327
+N+ +HG CK KVD+A + + EM + +PDV++Y+ I+ +C+ K DD M
Sbjct: 250 TYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM 309
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
C P +T+ ++H + K+ EA +V+E M + +P Y+ L+ + A V
Sbjct: 310 MVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSV 369
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
+ A EI+ MK++ P+ TY +I C + A + L ME D P+ L
Sbjct: 370 ESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHAL 429
Query: 448 LKMCCRKKRM----KVLNFL---------------LTHMFKNDVSMDAGTYASLVRGLIE 488
+++ C++ + VL+ + + M V D TY +++R L
Sbjct: 430 VEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCG 489
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKML 517
+++ A + FE+M S+G P TY +L
Sbjct: 490 LDRVDSAIAEFEKMASRGCAPGLVTYTLL 518
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 141/314 (44%), Gaps = 31/314 (9%)
Query: 164 YNTMVDVLGKS---KKFCLMWE-LVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEA 219
+N M+ L K+ +K C +E L+K + N + T + + L + G+ D+A
Sbjct: 216 FNAMLHALWKNDEQEKACQFFERLLKSGKKPN-----VVTYNVAVHGLCKAGKVDEAYRI 270
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWC 277
M + V D S ++D K ++ A VF + +CIP F L+HG+
Sbjct: 271 LLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIP-HPVTFMTLLHGFS 329
Query: 278 KTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
+ +K +A + ++M GF P + +Y ++ C + +M+ K +P
Sbjct: 330 EHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDAN 389
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN------ 391
TY ++ L +A++++EA + + M++D+ +P+ + +L+ +L K G V +A
Sbjct: 390 TYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNV 449
Query: 392 -------------EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
E+ E M +GV P+ TY ++ S C ++A+ +KM C
Sbjct: 450 VEICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCA 509
Query: 439 PDCETYAPLLKMCC 452
P TY L+ C
Sbjct: 510 PGLVTYTLLIGEAC 523
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 107/248 (43%), Gaps = 22/248 (8%)
Query: 188 DELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGN 246
D +N G++ L T + +M + + A+E + MK+ + D + L+ L +
Sbjct: 343 DMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRAR 402
Query: 247 SVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
V+ A K FL+ D + + I + L+ CK +VD+A + + +
Sbjct: 403 RVDEA-KEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE---------- 451
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
C+ + + + +++M KG +P TY V+ +L +++ A+ +EKM S
Sbjct: 452 ------ICKAGEPDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMAS 505
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
C P Y+ LI A DA IFE M G P T T+ S+C R
Sbjct: 506 RGCAPGLVTYTLLIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTL--SSCLRDAGYQ 563
Query: 425 ALKLLQKM 432
L + Q++
Sbjct: 564 DLLVRQRI 571
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/344 (27%), Positives = 163/344 (47%), Gaps = 2/344 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
T ++++ + G D A E F M K G + ++ S L++ L +E A + E
Sbjct: 239 TYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEM 298
Query: 259 KD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
D I + + I I C + +A K + +M ++G P+V +YT I R+ F
Sbjct: 299 IDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKF 358
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+M G P+ +TY+ +++ L + AL ++E M S D LP+T Y+ +
Sbjct: 359 EVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVI 418
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I G ++ A IF+ M K G PNV+TYN +I + NA++LL+ M+ +
Sbjct: 419 IKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGL 478
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
K D TYA L+ R +++ L M ++ +S + TY +++ G + K++ A +
Sbjct: 479 KLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALA 538
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK-KRLGNAKERINKLLAHA 540
F +M+ G VP TY M+ K R+ A+ K++
Sbjct: 539 LFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQG 582
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 110/437 (25%), Positives = 185/437 (42%), Gaps = 60/437 (13%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFC-------LMWE--------- 182
N+ FF W + H + +M++ L + + F LM +
Sbjct: 89 NNTESVLRFFHWVSRTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVK 148
Query: 183 -LVKEMDELNNGYVSLATMSTIMRRLVRGGRYD-DAV--EAFRGMKKYGVEKDTRALSVL 238
+++ + E+N Y T+ + L++ G++D D + + + M G+ + + +
Sbjct: 149 RVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAM 208
Query: 239 MDTLVKGNSVEHAYKV---FLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
+ L V+ A + + C P + + LI G CK +D A + M +
Sbjct: 209 IKILCNKGKVQEAELIMGHIFHYGAC-P-DTFTYTSLIIGHCKNGNLDLAFEMFDRMVKD 266
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G P+ V+Y+ I C E + D L+EM +KG +P+V YTI + +L A + EA
Sbjct: 267 GCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEA 326
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+K+ KMK C P+ Y++LI LS+ G+ + A ++ M G+VP +TY+ +I+
Sbjct: 327 VKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQ 386
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCC----------------------- 452
E AL + + M P+ ETY ++K C
Sbjct: 387 LYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPN 446
Query: 453 ------------RKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE 500
++ M LL M N + +D TYA+L+ G GKLE A S F
Sbjct: 447 VITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFN 506
Query: 501 EMISKGIVPYHSTYKML 517
EM+ GI P TY +
Sbjct: 507 EMVEHGISPNVVTYNAI 523
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 170/361 (47%), Gaps = 7/361 (1%)
Query: 186 EMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
EM + N + T + ++ RGG+ + A F M ++G+ + + +++ +
Sbjct: 471 EMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTV 530
Query: 246 NSVEHAYKVFLEFKDC--IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
V+ A +F + + +P SS +N++I G+ KT ++ +A+ +M +QG P+V++
Sbjct: 531 AKVDDALALFWKMVESGNVP-SSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVIT 589
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
YT FI+ C+ EM+++ P++ TY+ ++ L + Q +A E++
Sbjct: 590 YTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLL 645
Query: 364 SDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEE 423
D C P+ Y++L+ L GR +A+++ E MKK+G+ P+ Y ++ C E E
Sbjct: 646 DDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVE 705
Query: 424 NALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
+ALK+ M +P Y L+ C+ + + M K + D + L+
Sbjct: 706 SALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLL 765
Query: 484 RGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQ 543
GL++ G+ +L+ M S+ T ML +L +I+K L KE+
Sbjct: 766 DGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALGCSIEIPQISKQLGIVKEK 825
Query: 544 K 544
+
Sbjct: 826 Q 826
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 152/328 (46%), Gaps = 1/328 (0%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLS 265
L GR +AV+ MKK G + + + L+ L + E A V+ + D + +
Sbjct: 317 LCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPT 376
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
+ ++ LI+ + + A + M P+ +Y I+ +C +K
Sbjct: 377 AVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFD 436
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
+M + G P+VITY I++H K +N A+++ E MK + DT Y++LI S+ G
Sbjct: 437 QMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGG 496
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+++ A +F +M + G+ PNV+TYN +I+ ++ ++AL L KM E P TY
Sbjct: 497 KLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYN 556
Query: 446 PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISK 505
++ + R+ M K + + TY S + GL ++G+ LA F EM +
Sbjct: 557 MMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKR 616
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERI 533
P TY L + L ++ ER+
Sbjct: 617 DYFPNLCTYSSLIDGLCQEGQAEDAERL 644
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/389 (25%), Positives = 184/389 (47%), Gaps = 23/389 (5%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN++++ L + + ELV+EM G V T +T++ + G +
Sbjct: 280 YNSVINGLCGKGRMSEVGELVEEMR--GKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSE 337
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTR 280
M G+ + + L++ + K ++ A ++F + + P + + + LI G+C+
Sbjct: 338 MVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRP-NERTYTTLIDGFCQKG 396
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+++A K + EM GFSP VV+Y + YC ++ L+ M E+G P V++Y+
Sbjct: 397 LMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYS 456
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
V+ + +++ +A ++ E+M LPDT YSSLI L ++ +A ++F +M ++
Sbjct: 457 TVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRR 516
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
G+ P+ +TY ++I++ C E AL+L +M + PD TY+ L+ +K R KV
Sbjct: 517 GLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVA 576
Query: 461 NFLLTHMFKNDVSMDAGTYAS---------------LVRGLIESGKLELACSFFEEMISK 505
LL +F + D TY + LV+G G + A F+ M+ +
Sbjct: 577 KRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQR 636
Query: 506 GIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
P + Y ++ R GN + N
Sbjct: 637 NHKPNAAIYNLMIHG--HSRGGNVHKAYN 663
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 118/486 (24%), Positives = 207/486 (42%), Gaps = 45/486 (9%)
Query: 57 SQSPDEDFVIPSLA--GWVESH----RLNEKSRISSRVLSENHETD-VDKISKILSKQYQ 109
S S D V+ SL+ G+V L + + VLS N D + + S + Y
Sbjct: 130 SSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYD 189
Query: 110 SPDKVVEALKGCGVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGYMHTPEMYNTM 167
++V + GVS + +R DL GF + + G YNT+
Sbjct: 190 DAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKE-GISPNVVTYNTL 248
Query: 168 VDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYG 227
+D K KK L++ M + +L + ++++ L GR + E M+ G
Sbjct: 249 IDASCKKKKVKEAMALLRAM-AVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKG 307
Query: 228 VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQK 287
+ D +N L++G+CK +
Sbjct: 308 LVPD----------------------------------EVTYNTLVNGFCKEGNLHQGLV 333
Query: 288 AMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALG 347
+ EM +G SP+VV+YT I C+ + + + +M+ +G +P+ TYT ++
Sbjct: 334 LLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFC 393
Query: 348 KAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVL 407
+ +NEA KV +M P Y++L+ GRV++A I M ++G+ P+V+
Sbjct: 394 QKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVV 453
Query: 408 TYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM 467
+Y+T+I+ C E A ++ ++M E PD TY+ L++ C ++++ L M
Sbjct: 454 SYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREM 513
Query: 468 FKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLG 527
+ + D TY SL+ G+L A +EM+ +G +P + TY +L L KK
Sbjct: 514 MRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKART 573
Query: 528 NAKERI 533
+R+
Sbjct: 574 KVAKRL 579
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/343 (23%), Positives = 164/343 (47%), Gaps = 7/343 (2%)
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEH--- 250
+ S A +++ L R G A+ ++G + + ++D L++ +S H
Sbjct: 129 FSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDY 188
Query: 251 --AYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
A +VF + ++ + + +N++I G ++ M++M ++G SP+VV+Y
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I+ C++K ++ L+ M G ++I+Y V++ L +++E ++ E+M+
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
+PD Y++L+ K G + + +M +G+ PNV+TY T+I+ C A++
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
+ +M +P+ TY L+ C+K M +L+ M + S TY +LV G
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428
Query: 488 ESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR-LGNA 529
G+++ A M+ +G+ P +Y + ++R LG A
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKA 471
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 168/435 (38%), Gaps = 93/435 (21%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YNT+V+ K L+ EM + G ++ T +T++ + + G AVE F
Sbjct: 315 YNTLVNGFCKEGNLHQGLVLLSEM--VGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQ 372
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILIHGWCKTRK 281
M+ G+ + R + L+D + + AYKV E S +N L+HG+C +
Sbjct: 373 MRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGR 432
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD-------------------- 321
V +A ++ M ++G PDVVSY+ I +CRE++ K
Sbjct: 433 VQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSS 492
Query: 322 ---------------DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
D +EM +G P +TYT +++A ++++AL+++++M
Sbjct: 493 LIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRG 552
Query: 367 CLPDTSFYSSLIFILSKAGRVK-------------------------------------- 388
LPD YS LI L+K R K
Sbjct: 553 FLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEG 612
Query: 389 ------------DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+A+ +F+ M ++ PN YN MI A L ++E
Sbjct: 613 LVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHS- 671
Query: 437 CKPDCETYA--PLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
C T A L+K R+ L+ LL ++ ++ DA LV + G ++
Sbjct: 672 -SFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDA 730
Query: 495 ACSFFEEMISKGIVP 509
+ EM G++P
Sbjct: 731 VLNVLTEMAKDGLLP 745
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/296 (17%), Positives = 130/296 (43%), Gaps = 23/296 (7%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y+T++ + ++ +++ +EM E G + T S++++ L + +A + FR
Sbjct: 455 YSTVIAGFCRERELGKAFQMKEEMVE--KGVLPDTVTYSSLIQGLCLQQKLVEAFDLFRE 512
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTR 280
M + G+ D + L++ + A ++ E + +P + +++LI+G K
Sbjct: 513 MMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLP-DNVTYSVLINGLNKKA 571
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKV----------------DDTL 324
+ A++ + ++F + PD V+Y IE+ C +F+ V D
Sbjct: 572 RTKVAKRLLLKLFYEESVPDDVTYNTLIEN-CSNNEFKSVEGLVKGFCMKGLMNEADRVF 630
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
K M ++ KP+ Y +++H + +++A +Y +++ T +L+ L++
Sbjct: 631 KTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALARE 690
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD 440
G + + + +++ + + + ++ + L +L +M +D PD
Sbjct: 691 GMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746
>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
mitochondrial [Vitis vinifera]
gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
Length = 695
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 167/370 (45%), Gaps = 4/370 (1%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGR 212
+ G M YN ++ K+ +V EM+ +G+ T S ++ GR
Sbjct: 319 EGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMER--SGFSPDEHTYSLLIDAYANAGR 376
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNI 271
++ A + M+ GV ++ S ++ + + +++V E ++ + +N+
Sbjct: 377 WESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNV 436
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+I + K +D A M +G PD V++ I+ +C+ K ++ + MQE G
Sbjct: 437 MIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESG 496
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C P TY I++++ G+ ++ + + KM+S L + Y++L+ I ++GR KDA
Sbjct: 497 CSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAI 556
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
E E MK G+ P+ YN +I++ R E A+ + M D KP L+
Sbjct: 557 ECLEVMKSVGLKPSSTMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAF 616
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
+R +L +M +ND+ D TY +L++ LI K + + +EEM G P
Sbjct: 617 GEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDR 676
Query: 512 STYKMLEEKL 521
ML L
Sbjct: 677 KARAMLRSAL 686
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 103/462 (22%), Positives = 199/462 (43%), Gaps = 24/462 (5%)
Query: 87 RVLSENHETDVDKISKILSKQYQSPD----KVVEALKGCGVSVSNSLVEQTLRRFSNDLT 142
R LS N E+D D +++ S S D ++VE+ + + +SL+ ++L S+ +
Sbjct: 78 RFLS-NSESDSDSGAEVESPPPTSLDFTEFQLVESYRAVPAPLWHSLL-KSLCSDSSSIG 135
Query: 143 PAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMST 202
A+ TW + +Y+ ++ LG+S+K + L + ++ T +
Sbjct: 136 TAYSLVTWLERHNLCFSYELLYSILIHALGRSEKLYEAFLLSQRQT------LTPLTYNA 189
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY--KVFLEFK- 259
++ R + A+ M++ G D S ++ +L + N + + K++ E +
Sbjct: 190 LIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIES 249
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
D I L Q+ N +I G+ K+ V+ A + + G SP + I +
Sbjct: 250 DKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEE 309
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ +E++E G P Y ++ K + +A + +M+ PD YS LI
Sbjct: 310 AEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLID 369
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
+ AGR + A + ++M+ GV PN ++ +++S R + + + ++L++M P
Sbjct: 370 AYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSP 429
Query: 440 DCETYAPLL----KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
D Y ++ K C + + M V DA T+ +L+ +SG A
Sbjct: 430 DRHFYNVMIDTFGKCNCLDHALATFD----RMRMEGVQPDAVTWNTLIDCHCKSGHHNKA 485
Query: 496 CSFFEEMISKGIVPYHSTYK-MLEEKLEKKRLGNAKERINKL 536
FE M G P +TY M+ E++R + K + K+
Sbjct: 486 EELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKM 527
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 193/401 (48%), Gaps = 25/401 (6%)
Query: 137 FSNDLTP--AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY 194
FS +L P A F W + H + Y +++ ++ K + +++ M +
Sbjct: 75 FSLNLDPHTALQFSYWISQTPNFKHNVDSYASLLTLIDHHKIVSDVPKIIVSMIKCCYSA 134
Query: 195 VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV 254
+S I R++ + DD + + + L+ L + V+ ++
Sbjct: 135 PDALFVSDICRKMSK----DDITKL-----------SLKCYNELLTLLARFGLVDEMNQL 179
Query: 255 FLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
+ E ++ + + FN++I+ +CK V +A++ M +M Q G SPD + T FI YCR
Sbjct: 180 YTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCR 239
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
KD +EM + + ++Y ++H L +A +I+EA+ ++ +MK D C P+
Sbjct: 240 SKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYT 295
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + V A + ++M ++ +VP+++TYN++I+ C ++A +LL M+
Sbjct: 296 YTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMK 354
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E PD TY + C+ R++ L + + VS + Y+ L+ G + GK++
Sbjct: 355 ERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVD 414
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERIN 534
A FE+M+SK P T+ L L GN KE ++
Sbjct: 415 EAGCLFEKMLSKNCSPNAYTFNALIHGLCSA--GNLKEALS 453
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 102/373 (27%), Positives = 178/373 (47%), Gaps = 17/373 (4%)
Query: 160 TPEMYNTMVDVLG--KSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
+P+ + + +LG +SK + + +EM N + + ++ L GR D+AV
Sbjct: 224 SPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNE-----VSYNQLIHGLCEAGRIDEAV 278
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHG 275
F MK + + L+ L + N V A + E ++ +P +N LI G
Sbjct: 279 SLFVRMKDDCCYPNVYTYTALIKGLCRKN-VHKAMGLLDEMLERNLVP-DLITYNSLIAG 336
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
C+ +D A + + M ++G PD +Y CFI+ C+ + + E+G +
Sbjct: 337 QCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSAN 396
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
VI Y++++ K +++EA ++EKM S +C P+ +++LI L AG +K+A +F+
Sbjct: 397 VIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFD 456
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
M K G+ P V T+N +I + + ++A K LQKM KP TY +++ C
Sbjct: 457 QMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAG 516
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFE---EMISKGIVPYHS 512
+++ ++ M + V D TY SL++ GKL L S F+ M P H
Sbjct: 517 KVQEAEDMMVQMKEEGVPPDDFTYTSLIKAY---GKLGLTYSAFDVLKSMFDADCEPSHH 573
Query: 513 TYKMLEEKLEKKR 525
T+ L ++L KR
Sbjct: 574 TFLSLIKQLFDKR 586
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 182/432 (42%), Gaps = 38/432 (8%)
Query: 127 NSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKE 186
NSL+ R + L A+ + K + G + Y +D L KS + + E +
Sbjct: 331 NSLIAGQCR--AGHLDSAYRLLSLMK-ERGLVPDQRTYGCFIDFLCKSNR---VEEARRL 384
Query: 187 MDELNNGYVSLATM--STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
D L VS + S ++ + G+ D+A F M + + L+ L
Sbjct: 385 FDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCS 444
Query: 245 GNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
+++ A +F + K + + FNILI K DDA K +++M G P +
Sbjct: 445 AGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVART 504
Query: 304 YTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMK 363
Y FIE YC ++ +D + +M+E+G P TYT ++ A GK A V + M
Sbjct: 505 YNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMF 564
Query: 364 SDDCLPDTSFYSSLI-------FILSKAGR-----------VKDAN-----------EIF 394
DC P + SLI +++ K+G V +N E+F
Sbjct: 565 DADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELF 624
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
E+M+K G P+ Y +IS C ALKLL +M+++ P + ++ CC+
Sbjct: 625 EEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKL 684
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
++ ++ M + S +L+ GL E G+ E S F+++ G +
Sbjct: 685 QKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAW 744
Query: 515 KMLEEKLEKKRL 526
K+L + + K+ L
Sbjct: 745 KILIDGMLKQGL 756
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 81/165 (49%), Gaps = 6/165 (3%)
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y+ L+ +L++ G V + N+++ +M ++ V ++ T+N MI+ C + A + + KM
Sbjct: 160 YNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMI 219
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM-FKNDVSMDAGTYASLVRGLIESGKL 492
+ PD T + CR K + + M +N+VS Y L+ GL E+G++
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVS-----YNQLIHGLCEAGRI 274
Query: 493 ELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLL 537
+ A S F M P TY L + L +K + A ++++L
Sbjct: 275 DEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHKAMGLLDEML 319
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 75/172 (43%), Gaps = 1/172 (0%)
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
W K + D + +EM + G +PD Y I C+ ++ L +MQ++G PS
Sbjct: 612 W-KMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPS 670
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
+ + V+ K ++ EA + E M P +LI L + G + N +F+
Sbjct: 671 EMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFK 730
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
++ G + + + +I + E +L ++ME++ C TY+ L
Sbjct: 731 KLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSIL 782
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 75/157 (47%), Gaps = 1/157 (0%)
Query: 256 LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREK 315
+E C P S+ + LI G CK + A K + +M ++G SP + + I C+ +
Sbjct: 627 MEKHGCTP-DSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQ 685
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
+ + + +++M G P + ++ L + + V++K++ D +
Sbjct: 686 KYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWK 745
Query: 376 SLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTM 412
LI + K G V++ +++FE+M+K G + TY+ +
Sbjct: 746 ILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSIL 782
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 83/335 (24%), Positives = 165/335 (49%), Gaps = 21/335 (6%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK- 259
+T++ + + +DA + + M G+ + S L+ ++ A +F +
Sbjct: 199 NTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIIL 258
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
+ I FNIL+ G+CK RK+ + + M +QG PDVV+Y ++ YC K+
Sbjct: 259 ENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNT 318
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
M + G P + +Y I+++ K K++++A+ ++ +M + +P+ Y+SLI
Sbjct: 319 AKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLID 378
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
LSK+GR+ A ++ + M +GV PN+LTYN++I + + + A+ L+ K ++ +P
Sbjct: 379 GLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITKFKDQGIQP 438
Query: 440 DCETYAPLLKMCCRKK---------RMKVLNFLLTHMFKNDVSM-----------DAGTY 479
TY L+ C+ + + + F +F +S+ +A TY
Sbjct: 439 SMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSSCIPNAVTY 498
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+R L+++ + + A F EMI++G++ ++Y
Sbjct: 499 EITIRSLLDNNENDKAEKLFREMITRGLLNRSASY 533
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 150/326 (46%), Gaps = 5/326 (1%)
Query: 203 IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE-HAYKVFLEFKDC 261
I+ LV+ Y + + M+ G++ + ++L+ + + ++ FL
Sbjct: 92 ILGSLVKSKHYHTVLSLSQKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKL 151
Query: 262 IPLSSQI----FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+ L + + LIHG CK + A ++ + + + V Y I C++K
Sbjct: 152 VALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHV 211
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
D EM KG P+V+TY+ ++ ++ +A+ ++ K+ ++ PD ++ L
Sbjct: 212 NDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNIL 271
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
+ K ++K+ +F M KQG++P+V+TYN+++ C E A + M +
Sbjct: 272 VDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGV 331
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
PD +Y L+ C+ K++ L M ++ + TY SL+ GL +SG++ A
Sbjct: 332 NPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQ 391
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEK 523
++M +G+ P TY + + L K
Sbjct: 392 LVDQMHDRGVPPNILTYNSIIDALFK 417
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 124/262 (47%)
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
+ L++ ++N +I+G CK + V+DA EM +G SP+VV+Y+ I + +
Sbjct: 191 VQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAI 250
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
D ++ + KP T+ I++ K +++ E V+ M +PD Y+SL+
Sbjct: 251 DLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGY 310
Query: 382 SKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDC 441
V A IF M + GV P++ +YN +I+ C + + A+ L +M P+
Sbjct: 311 CLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNV 370
Query: 442 ETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
TY L+ + R+ L+ M V + TY S++ L ++ +++ A + +
Sbjct: 371 VTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITK 430
Query: 502 MISKGIVPYHSTYKMLEEKLEK 523
+GI P TY +L + L K
Sbjct: 431 FKDQGIQPSMYTYTILIDGLCK 452
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/230 (21%), Positives = 98/230 (42%), Gaps = 4/230 (1%)
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
+ +SY+ + D + + P + ++ +L K+K + L +
Sbjct: 50 NFISYSSTSTTFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLS 109
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAG----RVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+KM+ P+ + LI+ + G ++ A + + G + ++Y T+I
Sbjct: 110 QKMEFRGIKPNLFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHG 169
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C E AL LLQ+++ L + + Y ++ C+ K + L + M +S +
Sbjct: 170 LCKVGETRAALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPN 229
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
TY++L+ G GKL+ A F ++I + I P T+ +L + K R
Sbjct: 230 VVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDR 279
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 158/327 (48%), Gaps = 1/327 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF 258
S ++ + G DA+E +R ++ + +++ L+K + + + E
Sbjct: 70 VFSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEI 129
Query: 259 KDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+C P S FNIL+H +CK + AQ + + G P VVSY + Y R D
Sbjct: 130 LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDL 189
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ M G P V TY+++++ L K +++ A +++++M +P+ +++L
Sbjct: 190 DEGFRLKSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTL 249
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
I K GRV A EI++ M Q ++P+++TYNT+I C + + + A L+ +M
Sbjct: 250 IDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGL 309
Query: 438 KPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACS 497
KPD TY L+ CC++ + M + ++ +D Y +L+ GL + G+ A
Sbjct: 310 KPDKFTYTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEK 369
Query: 498 FFEEMISKGIVPYHSTYKMLEEKLEKK 524
EM+S G+ P TY M+ + KK
Sbjct: 370 MLREMLSVGLXPDAGTYTMIINEFCKK 396
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 146/333 (43%), Gaps = 37/333 (11%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W +E+ L GY SL + +M R + G A F + K+G+
Sbjct: 113 LMKLKYFKLVWGFYEEI--LECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLR 170
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ +N L++G+ + +D+ +
Sbjct: 171 PSVVS----------------------------------YNTLMNGYIRLGDLDEGFRLK 196
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
M G PDV +Y+ I C+E ++ EM KG P+ +T+T ++ K
Sbjct: 197 SAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKN 256
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+++ A+++Y++M S LPD Y++LI+ L K G +K A+++ ++M +G+ P+ TY
Sbjct: 257 GRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTY 316
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
T+I C + + A ++M ++ + D Y L+ C++ R +L M
Sbjct: 317 TTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLS 376
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
+ DAGTY ++ + G + +EM
Sbjct: 377 VGLXPDAGTYTMIINEFCKKGDVWKGSKLLKEM 409
>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Cucumis sativus]
Length = 908
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 175/346 (50%), Gaps = 4/346 (1%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
Y T+V L + ++F + E++ EM EL GYV S A +S ++ L++ G + A E
Sbjct: 298 YCTLVLGLCRIQEFEVGMEMMDEMIEL--GYVPSEAAVSGLIEGLIKMGSIEGAFELLNK 355
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ K GV + + ++++L K +E A +F + + + + + ILI G+ + K
Sbjct: 356 VGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAK 415
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+D A +M + G S V SY I C+ + + KEM +KG KP+V TYT
Sbjct: 416 LDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTS 475
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
++ K + +A K+Y +M P+T +++LI L + ++ +A+++F++M +
Sbjct: 476 LISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELK 535
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
++PN +TYN +I C A +LL +M + PD TY PL+ C R+
Sbjct: 536 ILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAK 595
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ + +D Y +L++G + G+++ A +EM+ +G+
Sbjct: 596 EFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGL 641
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/325 (24%), Positives = 156/325 (48%), Gaps = 1/325 (0%)
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
+ S + +++ V+ R D V M+ YG+ + R LS L++ L + +
Sbjct: 152 FSSSSGFDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLE 211
Query: 254 VFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
+F + + I+ +++ C+ + + A++ + + G S +V+Y FI C
Sbjct: 212 LFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLC 271
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ K + + + + EKG K ++TY ++ L + ++ +++ ++M +P +
Sbjct: 272 KSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEA 331
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
S LI L K G ++ A E+ + K GVVPN+ YN+MI+S C + E A L M
Sbjct: 332 AVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVM 391
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
E P+ TY L+ R+ ++ V + M + +S +Y S++ + GK+
Sbjct: 392 AERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKM 451
Query: 493 ELACSFFEEMISKGIVPYHSTYKML 517
++A F+EM+ KG+ P +TY L
Sbjct: 452 KMAELLFKEMVDKGLKPTVATYTSL 476
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 151/321 (47%), Gaps = 3/321 (0%)
Query: 199 TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--L 256
T+S ++ L R ++ +E F + GV+ D +V++ L + A ++
Sbjct: 192 TLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQA 251
Query: 257 EFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKD 316
E C LS +N+ I+G CK+++V +A + + + ++G D+V+Y + CR ++
Sbjct: 252 EGNGC-SLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQE 310
Query: 317 FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSS 376
F + + EM E G PS + ++ L K I A ++ K+ +P+ Y+S
Sbjct: 311 FEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNS 370
Query: 377 LIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
+I L K G++++A +F M ++G+ PN +TY +I R++ + A KM E
Sbjct: 371 MINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECG 430
Query: 437 CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELAC 496
+Y ++ C+ +MK+ L M + TY SL+ G + G + A
Sbjct: 431 ISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAF 490
Query: 497 SFFEEMISKGIVPYHSTYKML 517
+ EM KGI P T+ L
Sbjct: 491 KLYHEMTGKGIAPNTVTFTAL 511
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 182/406 (44%), Gaps = 38/406 (9%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGR 212
+ GY+ + + +++ L K +EL+ ++ +L G V +L ++++ L + G+
Sbjct: 323 ELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKL--GVVPNLFVYNSMINSLCKTGK 380
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNI 271
++A F M + G+ + ++L+D + ++ A+ F + +C I + +N
Sbjct: 381 LEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNS 440
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
+I+ CK K+ A+ KEM +G P V +YT I YC++ K EM KG
Sbjct: 441 MINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKG 500
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P+ +T+T ++ L + ++ EA K++++M LP+ Y+ LI + G A
Sbjct: 501 IAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAF 560
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
E+ ++M K+G+ P+ TY +I+ C+ A + + + + D Y LL+
Sbjct: 561 ELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGF 620
Query: 452 CRKKRMK----------------------------------VLNFLLTHMFKNDVSMDAG 477
C++ R+K +L LL M + D
Sbjct: 621 CKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFELLREMHGKGMQPDNV 680
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
Y L+ G I+SG L+ A F+ MI +G VP TY L L K
Sbjct: 681 IYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFK 726
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 152/366 (41%), Gaps = 44/366 (12%)
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
T + ++ R G A E M K G+ DT L+ L V A E
Sbjct: 541 VTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAK----E 596
Query: 258 FKDCIP-----LSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
F + + L + L+ G+CK ++ +A A +EM +G D+VSY I
Sbjct: 597 FINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGAL 656
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
+ D R + + L+EM KG +P + YTI++ K+ + +A + + M + +P++
Sbjct: 657 NQND-RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSV 715
Query: 373 FYSSLIFILSKAGRVKDANEIFEDM----------------------------------K 398
Y++L+ L KAG V +A +F+ M
Sbjct: 716 TYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAM 775
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
QG N +TYN +I C + + A KLL M PDC TY+ + C++ +
Sbjct: 776 LQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVD 835
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLE 518
+ M + + D + L+ +G+L+ A +M+ +G+ P STY L
Sbjct: 836 AAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895
Query: 519 EKLEKK 524
+L ++
Sbjct: 896 VQLAQR 901
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 116/241 (48%), Gaps = 2/241 (0%)
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV-FLEFKDCIPLSSQIFNILIHGW 276
E R M G++ D ++L+D +K +++ A++ ++ + +S + L++G
Sbjct: 665 ELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGL 724
Query: 277 CKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV 336
K V++A+ K M P+ ++Y CF++H +E + M + G +
Sbjct: 725 FKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANT 783
Query: 337 ITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFED 396
+TY I++ + + EA K+ + M +PD YS+ I+ K G V A +++E
Sbjct: 784 VTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWEC 843
Query: 397 MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKR 456
M ++G+ P+ + +N +I + C E + AL+L M KP TY L+ ++ R
Sbjct: 844 MLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRAR 903
Query: 457 M 457
+
Sbjct: 904 L 904
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/416 (23%), Positives = 169/416 (40%), Gaps = 52/416 (12%)
Query: 141 LTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGY-VSLAT 199
L AF +F + G T YN+M++ K K + L KEM ++ G ++AT
Sbjct: 416 LDVAFYYFN-KMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEM--VDKGLKPTVAT 472
Query: 200 MSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK 259
++++ + G A + + M G+ +T + L+ L + N + A K+F E
Sbjct: 473 YTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMV 532
Query: 260 DCIPLSSQI-FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
+ L +++ +N+LI G C+ A + + EM ++G SPD +Y I C
Sbjct: 533 ELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVS 592
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+ + + ++ K + + YT ++ K +I EAL ++M D Y+ LI
Sbjct: 593 EAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLI 652
Query: 379 -FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLC 437
L++ R+ E+ +M +G+ P+ + Y +I + A + M +
Sbjct: 653 SGALNQNDRI--LFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGY 710
Query: 438 KPDCETYAPLLKMCCRK----------KRM-----------------------------K 458
P+ TY L+ + KRM +
Sbjct: 711 VPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQ 770
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTY 514
+ N +L F N V TY L+RG + GK + A + MI G+VP TY
Sbjct: 771 LHNAMLQGSFANTV-----TYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITY 821
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/336 (22%), Positives = 139/336 (41%), Gaps = 43/336 (12%)
Query: 58 QSPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVV-- 115
Q DE L G+ + R+ E ++ + D+ + ++S D+++
Sbjct: 606 QRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRILFE 665
Query: 116 --EALKGCGVSVSNSLVEQTLRRF--SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL 171
+ G G+ N + + F S +L AF F+ + GY+ Y +V+ L
Sbjct: 666 LLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFW-YIMIGEGYVPNSVTYTALVNGL 724
Query: 172 GKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKD 231
K+ GYV+ A + + +R++ G EA YG
Sbjct: 725 FKA------------------GYVNEAKL--LFKRMLVG-------EAIPNHITYGC--- 754
Query: 232 TRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKE 291
+D L K ++E+A ++ ++ +NILI G+C+ K +A K +
Sbjct: 755 ------FLDHLTKEGNMENALQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDV 808
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M G PD ++Y+ FI YC+ + D + M ++G KP + + ++HA +
Sbjct: 809 MIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGE 868
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
++ AL++ M P S Y SL+ L++ R+
Sbjct: 869 LDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARL 904
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 129/298 (43%), Gaps = 13/298 (4%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-- 258
+ +++ + GR +A+ A + M G++ D + +VL+ + N ++ E
Sbjct: 614 TALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQND-----RILFELLR 668
Query: 259 ----KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
K P + I+ ILI G+ K+ + A + M +G+ P+ V+YT + +
Sbjct: 669 EMHGKGMQP-DNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKA 727
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ K M P+ ITY + L K + AL+++ M +T Y
Sbjct: 728 GYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQGS-FANTVTY 786
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ LI + G+ ++A ++ + M G+VP+ +TY+T I C R + A+ + + M +
Sbjct: 787 NILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQ 846
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
KPD + L+ CC + L M + TY SL+ L + +L
Sbjct: 847 RGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARL 904
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 100/223 (44%), Gaps = 4/223 (1%)
Query: 303 SYTCFIEHYCREKDFRKVDDTL--KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYE 360
+ I+HY + K R +D L M++ G P V T + +++AL + ++ + L++++
Sbjct: 157 GFDMLIQHYVQNK--RVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFD 214
Query: 361 KMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARS 420
+ + PD Y+ ++ L + A EI + G +++TYN I+ C
Sbjct: 215 TLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSK 274
Query: 421 EEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYA 480
A+++ + + E K D TY L+ CR + +V ++ M + +
Sbjct: 275 RVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVS 334
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
L+ GLI+ G +E A ++ G+VP Y + L K
Sbjct: 335 GLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCK 377
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 187/399 (46%), Gaps = 19/399 (4%)
Query: 144 AFGFFTWAKT-QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLA---- 198
AF F K + GY + T++ K CL E VK++ ++ V+ A
Sbjct: 62 AFSFSLLGKILKLGYXPNTITWTTLM------KGLCLKGE-VKKLLHFHDKVVAQAFQTN 114
Query: 199 --TMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T++ L + G A++ R ++ + S ++D L K V AY ++
Sbjct: 115 QVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYS 174
Query: 257 EF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
E ++ P + +N LI +C ++ A + EM + +PDV +++ I+ C+E
Sbjct: 175 EMDAREIFP-NVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKE 233
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
+ M + G P+V +Y I+++ L K K+++EA+ + +M + +PDT Y
Sbjct: 234 G--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTY 291
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+SLI L K+GR+ A + +M +G +V+TY +++ + C + A L KM+E
Sbjct: 292 NSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 351
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+P TY L+ C+ R+K L H+ +D TY ++ GL + G +
Sbjct: 352 RGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDE 411
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERI 533
A + +M G +P T++++ L +K + E++
Sbjct: 412 ALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 450
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 140/276 (50%), Gaps = 5/276 (1%)
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+ILI+ +C ++ + + ++ + G+ P+ +++T ++ C + + +K+ ++
Sbjct: 48 LSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVV 107
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
+ + + ++Y +++ L K + A+K+ ++ P+ YS++I L K V
Sbjct: 108 AQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVN 167
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A +++ +M + + PNV+TYNT+I + C + A LL +M PD T++ L+
Sbjct: 168 EAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILI 227
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C++ K + M + V+ + +Y ++ GL + +++ A + EM+ K +V
Sbjct: 228 DALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMV 285
Query: 509 PYHSTYKMLEEKLEKK-RLGNAKERINKLLAHAKEQ 543
P TY L + L K R+ +A +N++ H + Q
Sbjct: 286 PDTVTYNSLIDGLCKSGRITSALNLMNEM--HHRGQ 319
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 124/277 (44%), Gaps = 41/277 (14%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ + + + L+ EM L N + T S ++ L + G+ +A + F M
Sbjct: 188 YNTLICAFCLAGQLMGAFSLLHEMI-LKNINPDVYTFSILIDALCKEGK--NAKQIFHAM 244
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCKTRK 281
+ GV + + +++++ L K V+ A + E K+ +P + +N LI G CK+ +
Sbjct: 245 VQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVP-DTVTYNSLIDGLCKSGR 303
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS------ 335
+ A M EM +G DVV+YT ++ C+ ++ K +M+E+G +P+
Sbjct: 304 ITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTA 363
Query: 336 -----------------------------VITYTIVMHALGKAKQINEALKVYEKMKSDD 366
V TYT+++ L K +EAL + KM+ +
Sbjct: 364 LIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNG 423
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
C+P+ + +I L + A ++ +M +G++
Sbjct: 424 CIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLL 460
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 107/226 (47%), Gaps = 2/226 (0%)
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
A Q G YN M++ L K K+ L++EM N T ++++ L +
Sbjct: 243 AMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLH-KNMVPDTVTYNSLIDGLCKS 301
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD-CIPLSSQIF 269
GR A+ M G D + L+D L K +++ A +F++ K+ I + +
Sbjct: 302 GRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTY 361
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
LI G CK ++ +AQ+ + + +G DV +YT I C+E F + +M++
Sbjct: 362 TALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMED 421
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
GC P+ +T+ I++ +L + + ++A K+ +M + L +F+
Sbjct: 422 NGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLGFRNFHG 467
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 111/234 (47%), Gaps = 2/234 (0%)
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALK 357
SP ++ + + + K + V K+M KG + +++T +I+++ Q+ +
Sbjct: 8 SP-IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFS 66
Query: 358 VYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC 417
+ K+ P+T +++L+ L G VK + + Q N ++Y T+++ C
Sbjct: 67 LLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLC 126
Query: 418 ARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAG 477
E A+KLL+ +E+ +P+ Y+ ++ C+ K + L + M ++ +
Sbjct: 127 KTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVI 186
Query: 478 TYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKE 531
TY +L+ +G+L A S EMI K I P T+ +L + L K+ NAK+
Sbjct: 187 TYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG-KNAKQ 239
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 111/249 (44%), Gaps = 3/249 (1%)
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
K+M +G ++V+ + I +C L ++ + G P+ IT+T +M L
Sbjct: 34 KQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLK 93
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
++ + L ++K+ + + Y +L+ L K G + A ++ ++ + PNV+ Y
Sbjct: 94 GEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMY 153
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
+ +I C A L +M+ P+ TY L+ C ++ LL M
Sbjct: 154 SAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMIL 213
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK-KRLGN 528
+++ D T++ L+ L + GK A F M+ G+ P +Y ++ L K KR+
Sbjct: 214 KNINPDVYTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDE 271
Query: 529 AKERINKLL 537
A + ++L
Sbjct: 272 AMNLLREML 280
>gi|168026089|ref|XP_001765565.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683203|gb|EDQ69615.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 505
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 201/448 (44%), Gaps = 78/448 (17%)
Query: 162 EMYNTMVDVLGKS----KKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAV 217
+++NT++ + G++ K + KE G + T S++++ ++GG + +
Sbjct: 31 QLFNTLIHIYGEANMMEKALQTLAAFTKE-----GGRPTAYTYSSMIQVFMKGGDVQNGL 85
Query: 218 EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE-FKDCIPLSSQIFNILI--- 273
++ M K D ++L+D+L K + VE A VF + FK + + ILI
Sbjct: 86 LMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKLNVSPDVYTYTILIRSL 145
Query: 274 --------------------------------HGWCKTRKVDDAQKAMKEMFQQGFSPDV 301
H + +VD+A ++M Q+G PD
Sbjct: 146 GTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDA 205
Query: 302 VSYTCFIEHYC--------------------------------REKDFRKVDDTLKEMQE 329
V+Y I+ + R+ D + + + +M+
Sbjct: 206 VTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKA 265
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
KG + +TY I++ LG A ++ + ++Y +M +D D ++++ LSKAGRV+
Sbjct: 266 KGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEA 325
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A E+F+DMK +G+ + +TYN +I+ + + A LL +MEE+ C P+ TY L+
Sbjct: 326 AFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLIS 385
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+ + L M + V+ + +Y+SL+ G ++G+ + A S F EM ++G P
Sbjct: 386 SYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPP 445
Query: 510 YHSTYKMLEEKLEKK-RLGNAKERINKL 536
H TY +L + L + R G A E + ++
Sbjct: 446 NHVTYNLLIDCLIRAGRFGAAMEYLREM 473
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 5/299 (1%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
Q G YN ++D GK+ + ++ V + + + + T ++++ L R G
Sbjct: 197 VQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGK----SRSFTNEVTYNSLLSSLGRKGD 252
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDC-IPLSSQIFNI 271
+E F MK G+ + ++L++ L VE ++++LE D I N
Sbjct: 253 IQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYDIVTINN 312
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
++ K +V+ A + ++M +G + D V+Y I R L EM+E G
Sbjct: 313 VLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGRAGKLDAAGALLLEMEENG 372
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C P++ITY ++ + GK ++ A +++ +MK P+ YSSLI KAGR A
Sbjct: 373 CAPNIITYNTLISSYGKWSNLSAATRLFLEMKERGVAPNVVSYSSLIEGFGKAGRTDAAI 432
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKM 450
+F +MK +G PN +TYN +I A++ L++M + C+ T + L+++
Sbjct: 433 SLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAAMEYLREMRDAGCQMGKVTKSLLVRI 491
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 152/348 (43%), Gaps = 39/348 (11%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK------DCIPLS 265
RYDD M+K + DT+ + L+ + N +E A + F S
Sbjct: 10 RYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYTYS 69
Query: 266 SQI------------------------------FNILIHGWCKTRKVDDAQKAMKEMFQQ 295
S I FNILI K +V++A +MF+
Sbjct: 70 SMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMFKL 129
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
SPDV +YT I V + M +GC+P++ TY VMHA G A +++EA
Sbjct: 130 NVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVDEA 189
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
++++M PD Y+ LI K G+++ A F+ + K N +TYN+++SS
Sbjct: 190 CDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERA---FDFVGKSRSFTNEVTYNSLLSS 246
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
+ + + ++L +M+ + TYA L++ R++ + L M ND+ D
Sbjct: 247 LGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAGRVEDVWQLYLEMVDNDIKYD 306
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
T +++ L ++G++E A F++M KG+ TY +L L +
Sbjct: 307 IVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYNILINGLGR 354
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/341 (24%), Positives = 152/341 (44%), Gaps = 39/341 (11%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAY--- 252
+L T ++M GR D+A + F+ M + G++ D ++L+D K +E A+
Sbjct: 169 NLFTYHSVMHAFGSAGRVDEACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFV 228
Query: 253 -----------------------------KVFLEFKDCIPLSSQI-FNILIH--GWCKTR 280
++F + K +S+++ + ILI GW
Sbjct: 229 GKSRSFTNEVTYNSLLSSLGRKGDIQGLMELFGQMKAKGLVSNELTYAILIERLGWAG-- 286
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYT 340
+V+D + EM D+V+ ++ + + ++M+ KG +TY
Sbjct: 287 RVEDVWQLYLEMVDNDIKYDIVTINNVLDCLSKAGRVEAAFELFQDMKFKGLNADTVTYN 346
Query: 341 IVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQ 400
I+++ LG+A +++ A + +M+ + C P+ Y++LI K + A +F +MK++
Sbjct: 347 ILINGLGRAGKLDAAGALLLEMEENGCAPNIITYNTLISSYGKWSNLSAATRLFLEMKER 406
Query: 401 GVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVL 460
GV PNV++Y+++I + A+ L ++M+ + C P+ TY L+ R R
Sbjct: 407 GVAPNVVSYSSLIEGFGKAGRTDAAISLFREMKAEGCPPNHVTYNLLIDCLIRAGRFGAA 466
Query: 461 NFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
L M M T + LVR I +E A SFF+E
Sbjct: 467 MEYLREMRDAGCQMGKVTKSLLVR--IPPQYMEEAQSFFQE 505
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 116/275 (42%), Gaps = 32/275 (11%)
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R+ DD Q+ ++ M + D + I Y K TL ++G +P+ T
Sbjct: 8 ARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPTAYT 67
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y+ ++ K + L +Y++M +PD + ++ LI L+KA +V++A +F DM
Sbjct: 68 YSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFGDMF 127
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
K V P+V TY +I S + +KL + M C+P+ TY ++ R+
Sbjct: 128 KLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSVMHAFGSAGRVD 187
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF-------------------- 498
+ M + + DA TY L+ ++G+LE A F
Sbjct: 188 EACDIFQQMVQKGLQPDAVTYNILIDAFGKTGQLERAFDFVGKSRSFTNEVTYNSLLSSL 247
Query: 499 ------------FEEMISKGIVPYHSTYKMLEEKL 521
F +M +KG+V TY +L E+L
Sbjct: 248 GRKGDIQGLMELFGQMKAKGLVSNELTYAILIERL 282
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 4/172 (2%)
Query: 346 LGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
LG A++ ++ ++ E M+ D DT +++LI I +A ++ A + K+G P
Sbjct: 5 LGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEGGRPT 64
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
TY++MI + +N L + ++M + PD T+ L+ + +++ +
Sbjct: 65 AYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAKADQVEEACNVFG 124
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP----YHST 513
MFK +VS D TY L+R L G+++ FE M ++G P YHS
Sbjct: 125 DMFKLNVSPDVYTYTILIRSLGTIGRIDAVMKLFESMTAQGCQPNLFTYHSV 176
Score = 39.3 bits (90), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 54/112 (48%)
Query: 412 MISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKND 471
M++ A ++ +L++ M++D K D + + L+ + M+ L K
Sbjct: 1 MLTLLGAARRYDDVQRLVESMQKDRTKLDTQLFNTLIHIYGEANMMEKALQTLAAFTKEG 60
Query: 472 VSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
A TY+S+++ ++ G ++ +++M+ VP H+T+ +L + L K
Sbjct: 61 GRPTAYTYSSMIQVFMKGGDVQNGLLMYKQMLKAKFVPDHTTFNILIDSLAK 112
>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
Length = 628
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/410 (26%), Positives = 190/410 (46%), Gaps = 50/410 (12%)
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGG 211
++G + YNT + L K+ K E+++EMD G + + T +I+ L +
Sbjct: 180 ESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDR---GGIPPDVVTFCSIISGLCKAN 236
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK----DCI----- 262
R DDA + F+GM + G D+ S+++D L + N ++ +V + C+
Sbjct: 237 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYT 296
Query: 263 --------------PLSSQI---------------FNILIHGWCKTRKVDDAQKAMKEMF 293
PL+ I +N +I G CK+ VDDA K ++M
Sbjct: 297 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 356
Query: 294 QQGFS-PDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG-CKPSVITYTIVMHALGKAKQ 351
G PDV+ + I +C+ + L EM+ K C P V+TY ++ K
Sbjct: 357 DSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGS 416
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
+ +A + ++M++ C P+ Y++LI +K G ++A +F++M +G P+++TYNT
Sbjct: 417 LKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNT 476
Query: 412 MISS---ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMF 468
++S+ A S+ E + L K + C PD TY L+ CR + + LL M
Sbjct: 477 VLSAFSKAGMMSKAEGVYQQL-KNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMT 535
Query: 469 KNDVSMDAGTYASLVRGLIESGKL-ELACSFFEEMISKGIVPYHSTYKML 517
S D+ TY L+ L E+ ++ A + +++M+ + VP S + L
Sbjct: 536 ARGWSCDSYTYNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSL 585
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/377 (26%), Positives = 177/377 (46%), Gaps = 10/377 (2%)
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-S 196
+N + AF F + G + Y+ M+D L ++ + + E+++ M + G V
Sbjct: 235 ANRIDDAFQVFK-GMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVME 293
Query: 197 LATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFL 256
+ T + + L R G++ A GM + G + + + ++D L K +V+ A+K+
Sbjct: 294 VYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSR 353
Query: 257 EFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFS-PDVVSYTCFIEHYCR 313
+ D C FN LI G+CK ++ A + + EM + PDVV+Y I+ +
Sbjct: 354 KMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSK 413
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
++ L+EMQ GCKP+V+TY +++ K EA ++++M + C PD
Sbjct: 414 FGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIIT 473
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQG--VVPNVLTYNTMISSACARSEEENALKLLQK 431
Y++++ SKAG + A +++ +K + P+ +TY +I C + E L LLQ+
Sbjct: 474 YNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQE 533
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRM--KVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
M D TY L+ + + K L + M D A + SLVR + +
Sbjct: 534 MTARGWSCDSYTYNVLIAKLAETEEVPSKALA-VYQQMLDQDCVPSASIFNSLVRLFLRT 592
Query: 490 GKLELACSFFEEMISKG 506
G + A S +EM KG
Sbjct: 593 GDVNSARSMVQEMNEKG 609
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 135/291 (46%), Gaps = 40/291 (13%)
Query: 292 MFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQ 351
M G+ VV+YT I+ C+ D L++M + GC P+V+TYT ++ L KA++
Sbjct: 1 MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60
Query: 352 INEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNT 411
++A++ ++M C PD Y+SLI L A R+ DA + +++ + G PN +TY+T
Sbjct: 61 PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120
Query: 412 MISSACARSEEENALKLLQKM--EEDLCK------------------------------- 438
++ C R + A L+++M +C
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIE 180
Query: 439 ----PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
PD TY + C+ ++ +L M + + D T+ S++ GL ++ +++
Sbjct: 181 SGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDD 240
Query: 495 ACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKT 545
A F+ M+ +G VP TY ++ + L + N + ++++L H + K
Sbjct: 241 AFQVFKGMLERGCVPDSLTYSIMLDNLSR---ANRLDTVDEVLEHMQAMKA 288
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 148/320 (46%), Gaps = 5/320 (1%)
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRK 281
M + G D + + L K ++ ++ E + IP F +I G CK +
Sbjct: 178 MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANR 237
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ--EKGCKPSVITY 339
+DDA + K M ++G PD ++Y+ +++ R VD+ L+ MQ + GC V T+
Sbjct: 238 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTH 297
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+ AL ++ + A + M LP+ Y+ +I L K+G V DA ++ M
Sbjct: 298 NAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLD 357
Query: 400 QGVV-PNVLTYNTMISSACARSEEENALKLLQKME-EDLCKPDCETYAPLLKMCCRKKRM 457
G P+V+ +NT+IS C A +LL +M+ +++C PD TY L+ + +
Sbjct: 358 SGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSL 417
Query: 458 KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
K LL M + TYA+L+ G + G E A S F+EM +KG P TY +
Sbjct: 418 KQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTV 477
Query: 518 EEKLEKKRLGNAKERINKLL 537
K + + E + + L
Sbjct: 478 LSAFSKAGMMSKAEGVYQQL 497
>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
Length = 420
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 162/335 (48%), Gaps = 3/335 (0%)
Query: 190 LNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE 249
LN+ + + S + L + G+ +A+E FR M++ G D+ ++L++ L K +E
Sbjct: 84 LNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLE 143
Query: 250 HAYKVFLEFKD-CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFI 308
+ E + + + LIHG+C +VD A + EM +G +P+ V+YT I
Sbjct: 144 MGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALI 203
Query: 309 EHYCREKDFRKVDDTLKEMQEKG--CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDD 366
+ C + + LKEM+ +G C P+V+TYT ++H L + ++ ++M
Sbjct: 204 QGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISG 263
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C P+ + Y++LI L + G +A + +M G +V+ YN++I C E + A
Sbjct: 264 CFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAR 323
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
++ M E PD TY L++ C + L+ M + ++ TY +L+ G
Sbjct: 324 EMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGF 383
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL 521
++ + + A EM S G++P YK+L + L
Sbjct: 384 TQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 139/291 (47%), Gaps = 8/291 (2%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN +++ L K + + L+ EM G+ ++ T +T++ GR D A++
Sbjct: 129 YNILINGLCKDAQLEMGVSLMDEMQA--RGFSPTVVTYTTLIHGFCTAGRVDAAMDILDE 186
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK----DCIPLSSQIFNILIHGWCK 278
M+ G+ +T + L+ L VE A V E K +C P + + LIHG C+
Sbjct: 187 MEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCP-NVVTYTQLIHGLCQ 245
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
+ + + EM G P+ +YT I C++ F + L EM GC+ V+
Sbjct: 246 KGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVI 305
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ L K +++ A ++ M PD Y+SLI L AG + +A + ++M+
Sbjct: 306 YNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMR 365
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
+G+VPN +TY T+I+ ++AL+L+ +M+ + P + Y L K
Sbjct: 366 AKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFK 416
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 34/244 (13%)
Query: 300 DVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVY 359
DV+SY+ I C++ + + +EM+EKG P TY I+++ L K Q+ + +
Sbjct: 90 DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149
Query: 360 EKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACAR 419
++M++ P Y++LI AGRV A +I ++M+ +G+ PN +TY +I C
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209
Query: 420 SEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
E E A+ +L++M+ + N+ + TY
Sbjct: 210 GEVERAILVLKEMK---------------------------------LRGNECCPNVVTY 236
Query: 480 ASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKL-EKKRLGNAKERINKLLA 538
L+ GL + G E+ F +EMI G P ++TY L L +K A +N+++A
Sbjct: 237 TQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVA 296
Query: 539 HAKE 542
E
Sbjct: 297 IGCE 300
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 6/183 (3%)
Query: 348 KAKQINEALKVYEK--MKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPN 405
+ + I +L++Y + S D D YS I L K G++ +A EIF +M+++G P+
Sbjct: 68 RRRGIPSSLRIYRPKLLNSQDT--DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPD 125
Query: 406 VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLT 465
TYN +I+ C ++ E + L+ +M+ P TY L+ C R+ +L
Sbjct: 126 SFTYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILD 185
Query: 466 HMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKG--IVPYHSTYKMLEEKLEK 523
M ++ + TY +L++GL + G++E A +EM +G P TY L L +
Sbjct: 186 EMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQ 245
Query: 524 KRL 526
K L
Sbjct: 246 KGL 248
>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Glycine max]
Length = 1113
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/420 (25%), Positives = 190/420 (45%), Gaps = 41/420 (9%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y ++D L + K EL +M ++ L T T+M + G + + M
Sbjct: 300 YTVLIDALCAAGKLDKAKELYTKM-RASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEM 358
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+ G D ++L++ L K V+ A+ + + + +P + +N LI G R+
Sbjct: 359 EADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVP-NLHTYNTLISGLLNLRR 417
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSV----- 336
+D+A + M G +P SY FI++Y + D K DT ++M+++G PS+
Sbjct: 418 LDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNA 477
Query: 337 ------------------------------ITYTIVMHALGKAKQINEALKVYEKMKSDD 366
+TY ++M KA QI++A K+ +M S+
Sbjct: 478 SLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEG 537
Query: 367 CLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENAL 426
C PD +SLI L KAGRV +A ++F +K + P V+TYN +I+ + AL
Sbjct: 538 CEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKAL 597
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
L M+E C P+ T+ LL C+ + + + M + S D TY +++ GL
Sbjct: 598 DLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGL 657
Query: 487 IESGKLELACSFFEEMISKGIVPYHST-YKMLEEKLEKKRLGNAKERINKLLAHAKEQKT 545
I+ G+ A F+ +M K + P H T Y +L ++ R+ +A + + + + + Q +
Sbjct: 658 IKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTS 716
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 152/294 (51%), Gaps = 12/294 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNG-YVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
YN ++D GKSK+ ++EL EM L G ++ T + I+ LV+ + A++ +
Sbjct: 826 YNLLLDAHGKSKRIDELFELYNEM--LCRGCKPNIITHNIIISALVKSNSINKALDLYYE 883
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--CIPLSSQIFNILIHGWCKTR 280
+ L+ L+K E A K+F E D C P + I+NILI+G+ K
Sbjct: 884 IISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKP-NCAIYNILINGFGKAG 942
Query: 281 KVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL---KEMQEKGCKPSVI 337
V+ A K M ++G PD+ SYT +E C R VDD + +E++ G P +
Sbjct: 943 NVNIACDLFKRMIKEGIRPDLKSYTILVE--CLFMTGR-VDDAVHYFEELKLTGLDPDTV 999
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
+Y ++++ LGK++++ EAL ++ +MK+ P+ Y++LI AG V A ++FE++
Sbjct: 1000 SYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMFEEL 1059
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ G+ PNV TYN +I ++ A + +KM C P+ T+A L C
Sbjct: 1060 QFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPNKC 1113
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 152/313 (48%), Gaps = 11/313 (3%)
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRA-LSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIF 269
GR +D F M+K + ++ L++ +KG + + + + L++ +
Sbjct: 136 GRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSY 195
Query: 270 NILIH-----GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
N LI+ G+CK +A K K M +G P + +Y+ + R +D + D L
Sbjct: 196 NGLIYFLLQPGFCK-----EALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLL 250
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
+EM+ G +P++ TYTI + LG+A +I++A + + M+ + C PD Y+ LI L A
Sbjct: 251 EEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAA 310
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
G++ A E++ M+ P+++TY T++S + E + +ME D PD TY
Sbjct: 311 GKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTY 370
Query: 445 APLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMIS 504
L++ C+ ++ +L M + + TY +L+ GL+ +L+ A F M S
Sbjct: 371 TILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMES 430
Query: 505 KGIVPYHSTYKML 517
G+ P +Y +
Sbjct: 431 LGVAPTAYSYVLF 443
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 119/514 (23%), Positives = 222/514 (43%), Gaps = 52/514 (10%)
Query: 59 SPDEDFVIPSLAGWVESHRLNEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEA- 117
SPD + + ++ ++++ +++ + +LSE E D+ ++ ++ Y++ +V EA
Sbjct: 504 SPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKA-GRVDEAW 562
Query: 118 --------LKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVD 169
LK V+ +++ L + L A F K ++G +N ++D
Sbjct: 563 QMFGRLKDLKLAPTVVTYNILITGLGK-EGKLLKALDLFGSMK-ESGCPPNTVTFNALLD 620
Query: 170 VLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K+ L ++ M +N + T +TI+ L++ GR A + MKK+ +
Sbjct: 621 CLCKNDAVDLALKMFCRMTIMNCS-PDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LS 678
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEF----------------KDCIPLSSQIFNI-- 271
D L L+ +VK VE A K+ +EF +CI + ++I
Sbjct: 679 PDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAIS 738
Query: 272 -------------------LIHGWCKTRKVDDAQKAMKEMFQQ-GFSPDVVSYTCFIEHY 311
LI CK +K DA+K + + G P SY C ++
Sbjct: 739 FAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGL 798
Query: 312 CREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDT 371
EM+ GC P++ TY +++ A GK+K+I+E ++Y +M C P+
Sbjct: 799 LGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNI 858
Query: 372 SFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQK 431
++ +I L K+ + A +++ ++ P TY +I E A+K+ ++
Sbjct: 859 ITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEE 918
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M + CKP+C Y L+ + + + L M K + D +Y LV L +G+
Sbjct: 919 MPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGR 978
Query: 492 LELACSFFEEMISKGIVPYHSTYKMLEEKLEKKR 525
++ A +FEE+ G+ P +Y ++ L K R
Sbjct: 979 VDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSR 1012
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 155/318 (48%), Gaps = 4/318 (1%)
Query: 203 IMRRLVRGGRYDDAVEAF-RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD- 260
++R L + + DA + F + K G + + LMD L+ N E A K+F+E K+
Sbjct: 758 LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817
Query: 261 -CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
C P + +N+L+ K++++D+ + EM +G P+++++ I + K
Sbjct: 818 GCCP-NIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINK 876
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
D E+ P+ TY ++ L KA + EA+K++E+M C P+ + Y+ LI
Sbjct: 877 ALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILIN 936
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
KAG V A ++F+ M K+G+ P++ +Y ++ ++A+ ++++ P
Sbjct: 937 GFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDP 996
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D +Y ++ + +R++ L + M +S + TY +L+ +G ++ A F
Sbjct: 997 DTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGKMF 1056
Query: 500 EEMISKGIVPYHSTYKML 517
EE+ G+ P TY L
Sbjct: 1057 EELQFMGLEPNVFTYNAL 1074
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 125/256 (48%), Gaps = 1/256 (0%)
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
+ A A+ +M Q GF + SY I + ++ K M +G KPS+ TY+
Sbjct: 173 IRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSA 232
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+M ALG+ + + + E+M++ P+ Y+ I +L +AGR+ DA I + M+ +G
Sbjct: 233 LMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEG 292
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
P+V+TY +I + CA + + A +L KM KPD TY L+ ++ +
Sbjct: 293 CGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVK 352
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK-MLEEK 520
+ M + + D TY LV L +SGK++ A + M +GIVP TY ++
Sbjct: 353 RFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGL 412
Query: 521 LEKKRLGNAKERINKL 536
L +RL A E N +
Sbjct: 413 LNLRRLDEALELFNNM 428
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/405 (23%), Positives = 180/405 (44%), Gaps = 13/405 (3%)
Query: 139 NDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVL---GKSKKFCLMWELVKE--MDELNNG 193
+D A +F +HTPE N M++ L G+ + +++L+++ ++ N
Sbjct: 100 SDPNSALSYFKMVSQLPNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNT 159
Query: 194 YVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYK 253
Y+ TI + L G A A M++ G + + + L+ L++ + A K
Sbjct: 160 YL------TIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALK 213
Query: 254 VFLE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYC 312
V+ + + S + ++ L+ + R ++EM G P++ +YT I
Sbjct: 214 VYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLG 273
Query: 313 REKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTS 372
R LK M+++GC P V+TYT+++ AL A ++++A ++Y KM++ PD
Sbjct: 274 RAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLV 333
Query: 373 FYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
Y +L+ G ++ + +M+ G P+V+TY ++ + C + + A +L M
Sbjct: 334 TYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVM 393
Query: 433 EEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKL 492
P+ TY L+ +R+ L +M V+ A +Y + + G
Sbjct: 394 RVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDP 453
Query: 493 ELACSFFEEMISKGIVP-YHSTYKMLEEKLEKKRLGNAKERINKL 536
E A FE+M +GI+P + L E R+ AK+ N +
Sbjct: 454 EKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDI 498
>gi|255583417|ref|XP_002532468.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223527826|gb|EEF29924.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 510
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 115/429 (26%), Positives = 192/429 (44%), Gaps = 43/429 (10%)
Query: 79 NEKSRISSRVLSENHETDVDKISKILSKQYQSPDKVVEA-LKGCGVSVSNSLVEQTLRRF 137
N+ S + + N + + +I++K P VE L G+ VS VEQ ++
Sbjct: 49 NKHPTFPSYLETPNLSPKIKLLCEIIAK---IPSSTVETILDETGLYVSQYDVEQVIKLS 105
Query: 138 SNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSL 197
+ PA FF WA + H+P +N +VD+LGK+ F MW+ +K M + VSL
Sbjct: 106 YSFPGPAVKFFRWAGFRLQDNHSPYSWNLVVDLLGKNCLFDAMWDAIKSMK--SKELVSL 163
Query: 198 ATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE 257
AT +++ V GR DA+ F M +YGV +D AL+ L+ + + A
Sbjct: 164 ATFASVFGSYVTAGRVKDAIFTFEVMNQYGVVRDVVALNSLLSAICRDGKTVDAVDFLFV 223
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ-GFSP-DVVSYTCFIEHYCREK 315
K+ I + F IL+ GW K + ++++ EM ++ G+ P + +Y F+ C
Sbjct: 224 AKNSIKPDADTFAILLEGWEKELNLVNSRQTFDEMVREIGWDPANTPAYDTFL---C--- 277
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYS 375
T++M +G NE ++ E MK C P F+
Sbjct: 278 ------------------------TLLMGRIG----FNEVIEFLEIMKEKRCCPGMRFFR 309
Query: 376 SLIFILSKAGRVKDANEIFED-MKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ I K V+ A I+E M+ G P++ YN MIS C + + AL+ L +M
Sbjct: 310 AAIEECLKVNDVRVAGLIWEVMMETNGFRPDIEMYNLMISLYCYTNNTDIALRFLDEMVY 369
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLEL 494
+ PD +TY L + + +++K + L M KN+ + ++ VR + S +
Sbjct: 370 NGVFPDRQTYNLLFQFLIKSRKLKEASVLFNEMIKNECLPNQANCSAAVRVFMHSKDPYM 429
Query: 495 ACSFFEEMI 503
A ++ MI
Sbjct: 430 AIKVWKCMI 438
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 114/487 (23%), Positives = 214/487 (43%), Gaps = 71/487 (14%)
Query: 125 VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV 184
VS S V + LR+ +D+ + +F + HT Y TM+D LG++ + + L+
Sbjct: 39 VSESHVVKVLRQ-EHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLL 97
Query: 185 KEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
++M +L N S +++ R + ++ F ++++G E + ++++D L+
Sbjct: 98 QQM-KLENVPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDALLS 156
Query: 245 GNSVEHAYKVFLEFK-DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVS 303
N + ++ K + + + +N+L+ C+ KVD A K + EM +G PD VS
Sbjct: 157 QNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVS 216
Query: 304 YTCFIEHYCREKD------------------------------FRKVDDTLKEMQEKGCK 333
YT I C+ D F++ D + EM ++G
Sbjct: 217 YTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVD 276
Query: 334 PSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEI 393
P+VI+Y+ V+ L + +L V+ +M C P+ ++SLI GRV DA +
Sbjct: 277 PNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGL 336
Query: 394 FEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPD------------- 440
+ M ++GV PNV+ YNT+I C+ + A+ + +ME+D +P+
Sbjct: 337 WNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAK 396
Query: 441 -------CETYAPLLKMCCRKK------------RMKVLNF---LLTHMFKNDVSMDAGT 478
CET+ ++ CR +M + + L+ +M + T
Sbjct: 397 SGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVIT 456
Query: 479 YASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLA 538
+ + ++GL +G++E A + ++M +P TY L + L + NA L+
Sbjct: 457 FNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFR---ANAFREACGLIR 513
Query: 539 HAKEQKT 545
+E+K
Sbjct: 514 ELEERKV 520
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/447 (22%), Positives = 191/447 (42%), Gaps = 45/447 (10%)
Query: 93 HETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLR--RFSNDLTPAFGFFTW 150
+ET +DK+ + + + +++ +K V S L + ++ R SN F +
Sbjct: 77 YETMIDKLGR--NNEMDGVSYLLQQMKLENVPCSQELFQFVIKCYRRSNLGEQGLKMF-Y 133
Query: 151 AKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG 210
+ G + ++YN ++D L F ++ L M ++ T + +++ L +
Sbjct: 134 RIREFGCEPSVKIYNLVLDALLSQNLFKMINALYNNMKS-EGLEPNVFTYNVLLKALCQN 192
Query: 211 GRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN 270
G+ D A + M G + D + + ++ ++ K V+ A ++ ++F+ +P ++N
Sbjct: 193 GKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKARELAMKFEPVVP----VYN 248
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LIHG CK + +A M EM +G P+V+SY+ I + M +
Sbjct: 249 ALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVR 308
Query: 331 GCKPS-----------------------------------VITYTIVMHALGKAKQINEA 355
GC+P+ V+ Y ++H L ++EA
Sbjct: 309 GCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEA 368
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+ V+ +M+ D P+ + YS++I+ +K+G + A E + M G PNV+ Y M+
Sbjct: 369 ISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDV 428
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
C S + A L+ M D C P T+ +K CR R++ +L M K + +
Sbjct: 429 LCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPN 488
Query: 476 AGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ GL + AC E+
Sbjct: 489 IRTYNELLDGLFRANAFREACGLIREL 515
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 162/324 (50%), Gaps = 2/324 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T +++++ GR DAV + M + GV + A + L+ L +++ A V+
Sbjct: 313 NVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVW 372
Query: 256 LEF-KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ KD I + ++ +I+G+ K+ + A + +M G P+VV YTC ++ C+
Sbjct: 373 NQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQM 432
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
F + D + M GC P+VIT+ + L +A ++ A+ V ++M+ +CLP+ Y
Sbjct: 433 SMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTY 492
Query: 375 SSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEE 434
+ L+ L +A ++A + +++++ V + +TYNT++ + L+LL KM
Sbjct: 493 NELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLV 552
Query: 435 DLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHM-FKNDVSMDAGTYASLVRGLIESGKLE 493
+ K D T + C+ ++K +L ++ + + D T+ ++ G+ E
Sbjct: 553 NGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTE 612
Query: 494 LACSFFEEMISKGIVPYHSTYKML 517
A + EM+ +GI P +T+ +L
Sbjct: 613 EAVVYLHEMLKRGIFPNIATWNVL 636
Score = 121 bits (304), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 138/298 (46%), Gaps = 3/298 (1%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIF 269
R+ +A + M GV+ + + S ++ L +VE + VF + + C P + Q F
Sbjct: 259 RFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRP-NVQTF 317
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
LI G+ +V DA M ++G SP+VV+Y I C + + + +M++
Sbjct: 318 TSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEK 377
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
+P+V TY+ +++ K+ + A + + KM + C P+ Y+ ++ +L +
Sbjct: 378 DSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQ 437
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A ++ ++M G P V+T+N I C E A+ +L +ME+ C P+ TY LL
Sbjct: 438 AFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLD 497
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
R + L+ + + V D TY +++ G +G + +M+ GI
Sbjct: 498 GLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGI 555
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/274 (18%), Positives = 110/274 (40%), Gaps = 37/274 (13%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++ T STI+ + G A E + M G + + ++D L + + + A+ +
Sbjct: 383 NVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLI 442
Query: 256 LE-FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
D P + FN I G C+ +V+ A + +M + P++ +Y ++ R
Sbjct: 443 DNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRA 502
Query: 315 KDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFY 374
FR+ ++E++E+ + +TY +M+ + L++ KM + DT
Sbjct: 503 NAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITV 562
Query: 375 SSLIFILSKAGRVKDANEIFED------------------------------------MK 398
++ + K G+VK A ++ ++ M
Sbjct: 563 NTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEML 622
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKM 432
K+G+ PN+ T+N ++ ++ +++L +
Sbjct: 623 KRGIFPNIATWNVLVRGFFSKLGHMGPIRILDDI 656
>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
Length = 484
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 154/315 (48%), Gaps = 4/315 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
++AT +T++ L + G+ D AV F + V+ D S L+ L + +E A KV+
Sbjct: 147 NVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVY 206
Query: 256 -LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCRE 314
+ + + +N + G+CK R+VD+A + +K M Q+G P VV+Y C I C+
Sbjct: 207 DMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQY 266
Query: 315 KD-FRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
K+ + ++M C P+ +TY ++ L K ++ L++++ M PD
Sbjct: 267 KNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYA 326
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSAC-ARSEE-ENALKLLQK 431
Y SLI+ K ++ +A I +D + V P+V Y T+IS C AR + AL L Q
Sbjct: 327 YHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQN 386
Query: 432 MEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGK 491
M++ P+ TY +L+ C+ R + MFK S + T+ + G+I GK
Sbjct: 387 MKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGK 446
Query: 492 LELACSFFEEMISKG 506
+ F +M+ KG
Sbjct: 447 TDKFERIFMDMVYKG 461
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 103/430 (23%), Positives = 193/430 (44%), Gaps = 46/430 (10%)
Query: 129 LVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKK------------ 176
LV +RR + L A FF W+ Q GY H Y ++ L ++++
Sbjct: 13 LVGSVIRRVPS-LALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKREL 71
Query: 177 -----------------FCLM------WELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
FC + W + M L + + +++ GR
Sbjct: 72 CAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIP-PDVTAYNVVLKGYCDLGRV 130
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNIL 272
A+ F M K + + + +++ L K ++ A +F D + ++ L
Sbjct: 131 GRALIKFGKMGK-TCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTL 189
Query: 273 IHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGC 332
+HG C+ +++ A K M + + D +Y + +C+E+ + + LK M ++GC
Sbjct: 190 VHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGC 249
Query: 333 KPSVITYTIVMHALGKAK-QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
KPSV+TY +++ + + K +I EA +++++M DC P+ Y ++I LSK V+
Sbjct: 250 KPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCL 309
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
E+F+ M K G+ P+ Y+++I + + + A +LQ + PD Y L+
Sbjct: 310 ELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGY 369
Query: 452 CRKKRMKVLNFLLTHMFKN----DVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
CR ++ +V LL +F+N V + TY ++RGL ++G+ + A F+EM
Sbjct: 370 CRARKPRVDEALL--LFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKC 427
Query: 508 VPYHSTYKML 517
P T+K++
Sbjct: 428 SPNRMTFKVM 437
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 1/198 (0%)
Query: 328 QEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRV 387
+++G + V YT ++H L +A++ EA++ +++ C P ++ +I
Sbjct: 36 KQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNP 95
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
A M+ G+ P+V YN ++ C AL KM + CKP+ TY +
Sbjct: 96 GRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTV 154
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGI 507
+ C+ ++ L T + + V D TY++LV GL ++ +LE A ++ M+
Sbjct: 155 INGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANY 214
Query: 508 VPYHSTYKMLEEKLEKKR 525
Y + + K+R
Sbjct: 215 DGDAGAYNAMADGFCKER 232
>gi|449457845|ref|XP_004146658.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
gi|449484609|ref|XP_004156929.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g46100-like [Cucumis sativus]
Length = 501
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 187/397 (47%), Gaps = 12/397 (3%)
Query: 132 QTLRRFSNDLTPAFGFFTWAKTQ--TGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDE 189
Q L + D+ A F A + G+ H ++ M+ L + +F L L+ M E
Sbjct: 48 QQLIQAERDIKKALIIFDSATAEYANGFKHDLNTFSLMISKLISANQFRLAETLLDRMKE 107
Query: 190 LNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVE 249
V+ + +I R R + D++ F M+ + + ++ ++ LV+ N ++
Sbjct: 108 -EKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHCKPTEKSYISVLAILVEENQLK 166
Query: 250 HAYKVFLEFKDC-IPLSSQIFNILIHGWCK-TRKVDDAQKAMKEMFQQGFSPDVVSYTCF 307
A++ + + + IP + N+LI +CK + +D A + M G PD +Y
Sbjct: 167 SAFRFYRDMRKMGIPPTVTSLNVLIKAFCKNSGTMDKAMHLFRTMSNHGCEPDSYTYGTL 226
Query: 308 IEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDC 367
I CR + + + L+EM+ KGC PSV+TYT ++H L + ++EA+++ E MK +
Sbjct: 227 INGLCRFRSIVEAKELLQEMETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDMKDKNI 286
Query: 368 LPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALK 427
P+ YSSL+ K G A +I E M ++ + PN+++Y+T+++ C + AL+
Sbjct: 287 EPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKINEALE 346
Query: 428 LLQKMEEDLCKPDCETYAPLLKMCCRKKRMK-VLNFL----LTHMFKNDV--SMDAGTYA 480
+ +M+ KPD Y ++ C R + NFL L + N + S+ T+
Sbjct: 347 IFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLHVRTHN 406
Query: 481 SLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ GL A + ++++GI T+ L
Sbjct: 407 RVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSL 443
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 88/396 (22%), Positives = 189/396 (47%), Gaps = 14/396 (3%)
Query: 100 ISKILS-KQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYM 158
ISK++S Q++ + +++ +K + V+ ++ R + P + K Q +
Sbjct: 86 ISKLISANQFRLAETLLDRMKEEKIDVTEDILLSICRAYGRIHKPLDSIRVFHKMQDFHC 145
Query: 159 H-TPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRG-GRYDDA 216
T + Y +++ +L + + + ++M ++ ++ +++ +++ + G D A
Sbjct: 146 KPTEKSYISVLAILVEENQLKSAFRFYRDMRKMGIP-PTVTSLNVLIKAFCKNSGTMDKA 204
Query: 217 VEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIH 274
+ FR M +G E D+ L++ L + S+ A ++ +E K C P S + +IH
Sbjct: 205 MHLFRTMSNHGCEPDSYTYGTLINGLCRFRSIVEAKELLQEMETKGCSP-SVVTYTSIIH 263
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G C+ VD+A + +++M + P+V +Y+ ++ +C+ + D L+ M +K +P
Sbjct: 264 GLCQLNNVDEAMRLLEDMKDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRP 323
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
++I+Y+ +++ L +INEAL+++++MK PD Y ++ L R ++A
Sbjct: 324 NMISYSTLLNGLCNEGKINEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFL 383
Query: 395 EDMKKQGVVPN-------VLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPL 447
++M G+ PN V T+N +I C + A +L + +T+ L
Sbjct: 384 DEMVLCGIKPNRITWSLHVRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSL 443
Query: 448 LKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLV 483
LK C KK + + +L M N ++++V
Sbjct: 444 LKCFCNKKDLPKTSRILDEMVINGCIPQGEMWSTMV 479
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/275 (24%), Positives = 122/275 (44%), Gaps = 9/275 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y T+++ L + + EL++EM E S+ T ++I+ L + D+A+ M
Sbjct: 223 YGTLINGLCRFRSIVEAKELLQEM-ETKGCSPSVVTYTSIIHGLCQLNNVDEAMRLLEDM 281
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF-LEFKDCIPLSSQIFNILIHGWCKTRKV 282
K +E + S LMD K A + L + + + ++ L++G C K+
Sbjct: 282 KDKNIEPNVFTYSSLMDGFCKTGHSSRARDILELMIQKRLRPNMISYSTLLNGLCNEGKI 341
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI- 341
++A + M QGF PD Y + C F++ + L EM G KP+ IT+++
Sbjct: 342 NEALEIFDRMKLQGFKPDAGLYGKIVNCLCDVSRFQEAANFLDEMVLCGIKPNRITWSLH 401
Query: 342 ------VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
V+H L N A ++Y + + ++SL+ + + I +
Sbjct: 402 VRTHNRVIHGLCTINNSNRAFQLYLSVLTRGISITVDTFNSLLKCFCNKKDLPKTSRILD 461
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
+M G +P ++TM++ C + +A+KLLQ
Sbjct: 462 EMVINGCIPQGEMWSTMVNCFCDERKACDAMKLLQ 496
>gi|255555533|ref|XP_002518803.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223542184|gb|EEF43728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 775
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/448 (25%), Positives = 195/448 (43%), Gaps = 43/448 (9%)
Query: 94 ETDVDKISKILSKQYQSPDKVVEALKGCGVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKT 153
+ D I KI+ + + K V + S+ V + L D A FF WAKT
Sbjct: 65 QLDKASIIKIIQQDQWNDPKFVRFIDS---SLGPIWVSRVLVELKQDPKLALKFFRWAKT 121
Query: 154 QTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
+ G+ T E Y +V +L ++ + +KE+ +S+ RR++ G
Sbjct: 122 KFGFCLTTESYCLLVHILFYARMYFDANFFLKEL------------ISS--RRILPGFDV 167
Query: 214 DDAVEAFRGM--KKYGVEKDTRALSVLMDTLVKGNSVEHA---------YKVFLEFKDCI 262
+ + + R + +GV L ++ +E A ++VF + + C
Sbjct: 168 FEVLWSTRNVCVPGFGV------FDALFSVFIELGMLEEAGQCFSRMTRFRVFPKARSC- 220
Query: 263 PLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDD 322
N ++ KT K D + K ++M G + V +Y I + C+E D
Sbjct: 221 -------NAFLYRLAKTGKGDLSNKFFRDMVGAGIAQSVFTYNIMIGYMCKEGDMVTAKS 273
Query: 323 TLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILS 382
+M++ G P ++TY ++ GK ++E+ ++E+MK C PD Y++LI
Sbjct: 274 LFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPDVITYNALINCFC 333
Query: 383 KAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCE 442
K ++ A +MK G+ PNV+TY+T+I + C + A+K L M P+
Sbjct: 334 KYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRRVGLSPNEF 393
Query: 443 TYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM 502
TY L+ C+ + L M + V + TY +L+ GL + G++ A F M
Sbjct: 394 TYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAM 453
Query: 503 ISKGIVPYHSTY-KMLEEKLEKKRLGNA 529
I G+ P TY ++ ++ KR+ NA
Sbjct: 454 IKAGVTPNLKTYTALVHGHIKNKRVENA 481
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/333 (27%), Positives = 167/333 (50%), Gaps = 3/333 (0%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ T + ++ + + G A F MK+ G+ D + L+D K ++ ++ +F
Sbjct: 251 SVFTYNIMIGYMCKEGDMVTAKSLFHQMKQMGLTPDIVTYNSLIDGYGKLGLLDESFCLF 310
Query: 256 LEFKD--CIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E KD C P +N LI+ +CK ++ A + EM G P+VV+Y+ I+ C+
Sbjct: 311 EEMKDVGCEP-DVITYNALINCFCKYEQMPKAFHFLHEMKNSGLKPNVVTYSTLIDALCK 369
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
E ++ L +M+ G P+ TYT ++ A KA +++ALK+ ++M +
Sbjct: 370 EHMLQQAIKFLLDMRRVGLSPNEFTYTSLIDANCKAGYLSDALKLADEMLQVQVGFNVVT 429
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++L+ L K GR+ +A ++F M K GV PN+ TY ++ ENAL+LL++++
Sbjct: 430 YTTLLDGLCKEGRMMEAEDLFRAMIKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIK 489
Query: 434 EDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLE 493
E KPD Y ++ C + +++ F+++ M + ++ Y + ++GK
Sbjct: 490 EKKIKPDLLLYGTIIWGLCSQNKLEECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTV 549
Query: 494 LACSFFEEMISKGIVPYHSTYKMLEEKLEKKRL 526
A + +EM G+ T+ +L + L KK L
Sbjct: 550 EALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGL 582
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 169/367 (46%), Gaps = 15/367 (4%)
Query: 160 TPEM--YNTMVDVLGK----SKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRY 213
TP++ YN+++D GK + FCL E+ E + + T + ++ + +
Sbjct: 284 TPDIVTYNSLIDGYGKLGLLDESFCLFEEMKDVGCEPD-----VITYNALINCFCKYEQM 338
Query: 214 DDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNI-- 271
A MK G++ + S L+D L K + ++ A K L+ + + LS F
Sbjct: 339 PKAFHFLHEMKNSGLKPNVVTYSTLIDALCKEHMLQQAIKFLLDMRR-VGLSPNEFTYTS 397
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
LI CK + DA K EM Q +VV+YT ++ C+E + +D + M + G
Sbjct: 398 LIDANCKAGYLSDALKLADEMLQVQVGFNVVTYTTLLDGLCKEGRMMEAEDLFRAMIKAG 457
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
P++ TYT ++H K K++ AL++ +++K PD Y ++I+ L ++++
Sbjct: 458 VTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKLEECE 517
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ +MK G+ N + Y + + + AL LLQ+M + + T+ L+
Sbjct: 518 FVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGL 577
Query: 452 CRKKRM-KVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPY 510
C+K + + +++ N + +L+ GL ++ +E A F+EM K +VP
Sbjct: 578 CKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPD 637
Query: 511 HSTYKML 517
Y L
Sbjct: 638 KIAYTAL 644
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 160/348 (45%), Gaps = 38/348 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y +++D K+ +L EM ++ G+ ++ T +T++ L + GR +A + FR M
Sbjct: 395 YTSLIDANCKAGYLSDALKLADEMLQVQVGF-NVVTYTTLLDGLCKEGRMMEAEDLFRAM 453
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI-FNILIHGWCKTRKV 282
K GV + + + L+ +K VE+A ++ E K+ + + +I G C K+
Sbjct: 454 IKAGVTPNLKTYTALVHGHIKNKRVENALELLKEIKEKKIKPDLLLYGTIIWGLCSQNKL 513
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
++ + M EM G + V YT ++ Y + + + L+EM + G + +++T+ ++
Sbjct: 514 EECEFVMSEMKACGIRANSVIYTIRMDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVL 573
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPD-TSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
+ L K + EA+ + +M + P+ + ++LI L K ++ A ++F++M+ +
Sbjct: 574 IDGLCKKGLVEEAIDYFARMADFNLQPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKN 633
Query: 402 VVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLN 461
+VP+ + Y +I + + AL + +M E L M
Sbjct: 634 MVPDKIAYTALIDGNLKHKDFQEALNIRSRMSE-------------LGM----------- 669
Query: 462 FLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
+D Y SLV GL + ++ A F EMI KGIVP
Sbjct: 670 -----------ELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVP 706
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 87/199 (43%), Gaps = 2/199 (1%)
Query: 204 MRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKD--C 261
M + G+ +A+ + M GVE VL+D L K VE A F D
Sbjct: 539 MDAYFKTGKTVEALNLLQEMCDLGVEVTIVTFCVLIDGLCKKGLVEEAIDYFARMADFNL 598
Query: 262 IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVD 321
P + + LI G CK ++ A+K EM + PD ++YT I+ + KDF++
Sbjct: 599 QPNNVAVCTALIDGLCKNNYIEAAKKLFDEMQDKNMVPDKIAYTALIDGNLKHKDFQEAL 658
Query: 322 DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFIL 381
+ M E G + + YT ++ L + + +A +M +PD L+
Sbjct: 659 NIRSRMSELGMELDLHAYTSLVWGLSQGNLVQQARMFLNEMIGKGIVPDEILCIRLLRKY 718
Query: 382 SKAGRVKDANEIFEDMKKQ 400
+ G + +A E+ +++ K+
Sbjct: 719 YELGSIDEAIELHDELLKK 737
>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
Length = 674
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/392 (28%), Positives = 178/392 (45%), Gaps = 50/392 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YNT++ L +K++ EL++EM NN + + T +T +R + G D AVE M
Sbjct: 222 YNTVLKGLCFAKQWEEAEELMREMIR-NNCHPNEVTFATQIRAFCQNGLLDRAVELLEQM 280
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---------------------------- 255
KYG D S L++ + V+ A K+
Sbjct: 281 PKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEV 340
Query: 256 ------LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY----T 305
+ KDC P + F+ LI+ C+ R + A + +++M + G+ PDVVSY +
Sbjct: 341 GELIAEMVRKDCPP-NDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIIS 399
Query: 306 CFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSD 365
CF E C DD LK + CKP I++ V+ L +A++ +A ++ KM +
Sbjct: 400 CFSEQAC-------ADDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKE 452
Query: 366 DCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENA 425
DC + ++ LI L + G+VKDA E+FE M K P+++TY+++I+ + ++ A
Sbjct: 453 DCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVA 512
Query: 426 LKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRG 485
L + M C+ D +Y LK C R L+ M D + T+ L+
Sbjct: 513 FDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINS 569
Query: 486 LIESGKLELACSFFEEMISKGIVPYHSTYKML 517
L + G + A +E+M GI P TY L
Sbjct: 570 LCQKGLVNRAIEVYEQMPKYGITPDIFTYNAL 601
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 96/339 (28%), Positives = 165/339 (48%), Gaps = 17/339 (5%)
Query: 192 NGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHA 251
+G ++ T + ++ R GR DA+ M V DT + ++ L E A
Sbjct: 182 SGAANVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCFAKQWEEA 238
Query: 252 YKVFLEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIE 309
++ E +C P + F I +C+ +D A + +++M + G PDVV Y+ +
Sbjct: 239 EELMREMIRNNCHP-NEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVN 297
Query: 310 HYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
+ + +VDD LK + C+P+ + Y + L A + +E ++ +M DC P
Sbjct: 298 GF---SEHGRVDDALKLLSTMLCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPP 354
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ + +S+LI L + + A E+ E M+K G +P+V++YNT+IS ++ ++ALKLL
Sbjct: 355 NDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLL 414
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIES 489
M LCKPD ++ +LK CR +R L+ M K D + T+ L+ L ++
Sbjct: 415 NSM---LCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQN 471
Query: 490 GKLELACSFFEEMISKGIVPYHSTYKML-----EEKLEK 523
G+++ A FE M P TY L E+ L+K
Sbjct: 472 GQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDK 510
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 134/282 (47%), Gaps = 7/282 (2%)
Query: 236 SVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQ 295
++L+ L + A +V K + N L+ G+C+ + DA++ ++
Sbjct: 123 NILIKKLCARRRLADAERVLEALKTSGAADAVSHNTLVAGYCRDGSLWDAERVLEAARAS 182
Query: 296 GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEA 355
G + +VV+YT I+ YCR ++ D L+ + P TY V+ L AKQ EA
Sbjct: 183 G-AANVVTYTALIDGYCRSG---RLTDALRLIASMPVAPDTYTYNTVLKGLCFAKQWEEA 238
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
++ +M ++C P+ +++ I + G + A E+ E M K G +P+V+ Y+T+++
Sbjct: 239 EELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVNG 298
Query: 416 ACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMD 475
++ALKLL M LC+P+ Y LK C R + L+ M + D +
Sbjct: 299 FSEHGRVDDALKLLSTM---LCRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDCPPN 355
Query: 476 AGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
T+++L+ L ++ E A E+M G +P +Y +
Sbjct: 356 DATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTI 397
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 159/350 (45%), Gaps = 42/350 (12%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
YN + L + ++ + EL+ EM + + AT ST++ L + + A+E M
Sbjct: 324 YNAALKGLCIAGRWDEVGELIAEMVR-KDCPPNDATFSTLINSLCQNRLAEYAIEVLEQM 382
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQI------------ 268
+KYG D + + ++ + + A K+ L D I ++ +
Sbjct: 383 QKYGYMPDVVSYNTIISCFSEQACADDALKLLNSMLCKPDTISFNAVLKCLCRAERWYDA 442
Query: 269 ------------------FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEH 310
FNILI C+ +V DA + + M + +PD+V+Y+ I
Sbjct: 443 AELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLING 502
Query: 311 YCREKDFRKVD-DTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLP 369
+ E+ KV D + M C+ + +Y + L A + ++A ++ M + DCLP
Sbjct: 503 F-SEQGLDKVAFDLFRSMP---CRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLP 558
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLL 429
+ ++ LI L + G V A E++E M K G+ P++ TYN +I+ + ++ALK L
Sbjct: 559 NEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFL 618
Query: 430 QKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTY 479
M C+PD +Y +LK CR +R K L+T M + + + + T+
Sbjct: 619 STMP---CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 125/258 (48%), Gaps = 8/258 (3%)
Query: 270 NILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQE 329
NILI C R++ DA++ ++ + G + D VS+ + YCR+ + L+ +
Sbjct: 123 NILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAERVLEAARA 181
Query: 330 KGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKD 389
G +V+TYT ++ ++ ++ +AL++ M PDT Y++++ L A + ++
Sbjct: 182 SG-AANVVTYTALIDGYCRSGRLTDALRLIASMPV---APDTYTYNTVLKGLCFAKQWEE 237
Query: 390 ANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLK 449
A E+ +M + PN +T+ T I + C + A++LL++M + C PD Y+ L+
Sbjct: 238 AEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTLVN 297
Query: 450 MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVP 509
R+ LL+ M ++ Y + ++GL +G+ + EM+ K P
Sbjct: 298 GFSEHGRVDDALKLLSTMLCRPNTV---CYNAALKGLCIAGRWDEVGELIAEMVRKDCPP 354
Query: 510 YHSTYKMLEEKLEKKRLG 527
+T+ L L + RL
Sbjct: 355 NDATFSTLINSLCQNRLA 372
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/443 (24%), Positives = 200/443 (45%), Gaps = 23/443 (5%)
Query: 111 PDKVVEALK------GC--GVSVSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPE 162
PD+ ++ + GC G+ NSL+ + SN A FF + +T G +
Sbjct: 69 PDQALDIFQRMHEIFGCQPGIRSYNSLLNALIE--SNKWDEAESFFLYFETM-GLSPNLQ 125
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV-SLATMSTIMRRLVRGGRYDDAVEAFR 221
YN ++ + + K+F EL+ M G+ + + T++ L + G DA++ F
Sbjct: 126 TYNILIKISCRKKQFDKAKELLNWM--WGQGFSPDVFSYGTLINSLAKNGYMSDALKLFD 183
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQI--FNILIHGWCKT 279
M + GV D ++L+D K + +A +++ + I +N++I+G CK
Sbjct: 184 EMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKC 243
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
K D++ + M + D+ +Y+ I C + KEM E G P V+ Y
Sbjct: 244 GKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVY 303
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
+++ +A +I E L++++ M+ + C S Y+ LI L + +V +A I+E + +
Sbjct: 304 NTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS-YNILIRGLFENAKVDEAISIWELLPE 362
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
+ + +TY ++ C AL +L++ E D Y+ ++ CR+ R+
Sbjct: 363 KDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE 422
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
+ +L M K+ + +++ G + + KLE A FF M+SKG P TY L
Sbjct: 423 VAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLIN 482
Query: 520 KLEKKRLGNAKERINKLLAHAKE 542
L K ER ++ A KE
Sbjct: 483 GLSK------AERFSEAYALVKE 499
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/398 (25%), Positives = 184/398 (46%), Gaps = 18/398 (4%)
Query: 150 WAKTQTGYMHTPEM--YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRL 207
W + G P + YN M++ L K KF +E+ M + G L T ST++ L
Sbjct: 217 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ-DLYTYSTLIHGL 275
Query: 208 VRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLS 265
G D A ++ M + GV D + +++ ++ +E +++ +E + C +
Sbjct: 276 CGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVV 335
Query: 266 SQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLK 325
S +NILI G + KVD+A + + ++ D ++Y + C+ K L+
Sbjct: 336 S--YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILE 393
Query: 326 EMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAG 385
E + Y+ +++ L + +++E V ++M C P+ +++I +A
Sbjct: 394 EAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRAS 453
Query: 386 RVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYA 445
+++DA F +M +G P V+TYNT+I+ A L+++M + KP+ TY+
Sbjct: 454 KLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYS 513
Query: 446 PLLKMCCRKKRMKV-LNFL---LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEE 501
L+ C+ K++ + LN L FK DV M + ++ GL SGK+E A + E
Sbjct: 514 LLMNGLCQGKKLDMALNLWCQALEKGFKPDVKM----HNIIIHGLCSSGKVEDALQLYSE 569
Query: 502 MISKGIVPYHSTYKMLEEKLEKKRLGNAKERINKLLAH 539
M + VP T+ L E K R ER +K+ H
Sbjct: 570 MKQRNCVPNLVTHNTLMEGFYKVR---DFERASKIWDH 604
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 92/391 (23%), Positives = 179/391 (45%), Gaps = 40/391 (10%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
Y+T++ L S + KEM E N + +T++ +R GR ++ +E ++ M
Sbjct: 268 YSTLIHGLCGSGNLDGATRVYKEMAE-NGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM 326
Query: 224 KKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRK 281
+K G + + ++L+ L + V+ A ++ L KDC S + +L+HG CK
Sbjct: 327 EKEGC-RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCA-DSMTYGVLVHGLCKNGY 384
Query: 282 VDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTI 341
++ A ++E D +Y+ I CRE +V L +M + GCKP+
Sbjct: 385 LNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNA 444
Query: 342 VMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQG 401
V++ +A ++ +AL+ + M S C P Y++LI LSKA R +A + ++M ++G
Sbjct: 445 VINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKG 504
Query: 402 VVPNVLTY-----------------------------------NTMISSACARSEEENAL 426
PN++TY N +I C+ + E+AL
Sbjct: 505 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 564
Query: 427 KLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGL 486
+L +M++ C P+ T+ L++ + + + + + H+ + + D +Y ++GL
Sbjct: 565 QLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGL 624
Query: 487 IESGKLELACSFFEEMISKGIVPYHSTYKML 517
++ A F + + +G++P T+ +L
Sbjct: 625 CSCHRISDAVGFLNDAVDRGVLPTAITWNIL 655
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 160/329 (48%), Gaps = 10/329 (3%)
Query: 164 YNTMVDVLGKSKKF---CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAF 220
YN ++ L ++ K +WEL+ E D + T ++ L + G + A+
Sbjct: 337 YNILIRGLFENAKVDEAISIWELLPEKDCCADS----MTYGVLVHGLCKNGYLNKALSIL 392
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--KDCIPLSSQIFNILIHGWCK 278
+ + DT A S +++ L + ++ V + C P + + N +I+G+ +
Sbjct: 393 EEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP-NPYVCNAVINGFVR 451
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
K++DA + M +G P VV+Y I + + F + +KEM +KG KP++IT
Sbjct: 452 ASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMIT 511
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y+++M+ L + K+++ AL ++ + PD ++ +I L +G+V+DA +++ +MK
Sbjct: 512 YSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMK 571
Query: 399 KQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMK 458
++ VPN++T+NT++ + E A K+ + + +PD +Y LK C R+
Sbjct: 572 QRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRIS 631
Query: 459 VLNFLLTHMFKNDVSMDAGTYASLVRGLI 487
L V A T+ LV+G +
Sbjct: 632 DAVGFLNDAVDRGVLPTAITWNILVQGYL 660
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 126/271 (46%), Gaps = 40/271 (14%)
Query: 187 MDELNNGYVSLATM--STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVK 244
++E NG L T S+++ L R GR D+ M K+G + + + +++ V+
Sbjct: 392 LEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVR 451
Query: 245 GNSVEHAYKVF--LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVV 302
+ +E A + F + K C P + +N LI+G K + +A +KEM Q+G+ P+++
Sbjct: 452 ASKLEDALRFFGNMVSKGCFP-TVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMI 510
Query: 303 SYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM 362
+Y+ + C+ K + + EKG KP V + I++H L + ++ +AL++Y +M
Sbjct: 511 TYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEM 570
Query: 363 KSDDCLPDTSFYSSLI------------------------------FILSKAG-----RV 387
K +C+P+ +++L+ + ++ G R+
Sbjct: 571 KQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRI 630
Query: 388 KDANEIFEDMKKQGVVPNVLTYNTMISSACA 418
DA D +GV+P +T+N ++ A
Sbjct: 631 SDAVGFLNDAVDRGVLPTAITWNILVQGYLA 661
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 139/311 (44%), Gaps = 11/311 (3%)
Query: 221 RGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFN--ILIHGWCK 278
R +K EK+ + + D++ + H VF + ++F+ ++ H + K
Sbjct: 12 RVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHH------ILKRLFDPKLVAHAYAK 65
Query: 279 TRKVDDAQKAMKEMFQQ-GFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVI 337
D A + M + G P + SY + + + + + G P++
Sbjct: 66 NSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQ 125
Query: 338 TYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDM 397
TY I++ + KQ ++A ++ M PD Y +LI L+K G + DA ++F++M
Sbjct: 126 TYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEM 185
Query: 398 KKQGVVPNVLTYNTMISSACARSEEENALKLLQK-MEEDLCKPDCETYAPLLKMCCRKKR 456
++GV P+V YN +I + + NA ++ ++ ++ P+ +Y ++ C+ +
Sbjct: 186 PERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGK 245
Query: 457 MKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK- 515
+ M KN+ D TY++L+ GL SG L+ A ++EM G+ P Y
Sbjct: 246 FDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNT 305
Query: 516 MLEEKLEKKRL 526
ML L R+
Sbjct: 306 MLNGYLRAGRI 316
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 42/230 (18%)
Query: 125 VSNSLVEQTLRRFSNDLTPAFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELV 184
V N+++ +R ++ L A FF G T YNT+++ L K+++F + LV
Sbjct: 441 VCNAVINGFVR--ASKLEDALRFFG-NMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 497
Query: 185 KEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLV 243
KEM L G+ ++ T S +M L +G + D A+ + + G + D + ++++ L
Sbjct: 498 KEM--LQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLC 555
Query: 244 KGNSVEHAYKVFLEFK--DCIP-------------------LSSQI-------------- 268
VE A +++ E K +C+P +S+I
Sbjct: 556 SSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDII 615
Query: 269 -FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
+NI + G C ++ DA + + +G P +++ ++ Y K +
Sbjct: 616 SYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGY 665
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/397 (24%), Positives = 180/397 (45%), Gaps = 4/397 (1%)
Query: 150 WAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVR 209
W + + + N ++D L K +F MW++ +M ++ T T++ R
Sbjct: 147 WVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVA-RGASPNVVTYGTLIDGCCR 205
Query: 210 GGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSS-QI 268
G + A F M + + ++L+ L + + A +F ++ L +
Sbjct: 206 QGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYT 265
Query: 269 FNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQ 328
+N ++ G+CK V A + +EM G P+VV++ I+ C+ + L +M
Sbjct: 266 YNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMA 325
Query: 329 EKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVK 388
G P++ Y ++ KA ++EAL ++ +++ + LPD YS LI L R++
Sbjct: 326 SFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRME 385
Query: 389 DANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLL 448
+A+ + ++MKK+G +PN +TYNT+I C E A+++ +M E +P+ T++ L+
Sbjct: 386 EADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLI 445
Query: 449 KMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIV 508
C+ +M+ L T M + D Y +L+ G + G + A +EM G+
Sbjct: 446 DGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLH 505
Query: 509 PYHSTYKMLEEKLEKKRLGNAKERINKLLAHAKEQKT 545
P T L + L K G + I LA T
Sbjct: 506 PNVFTLSCLIDGLCKD--GRISDAIKLFLAKTGTDTT 540
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 100/378 (26%), Positives = 167/378 (44%), Gaps = 24/378 (6%)
Query: 161 PEMYNTMVDVLGKSKKF----CLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDA 216
P++Y+ ++ VL +K + CLM +L++ + + + + + R + ++
Sbjct: 70 PQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRRSRICCSVFNVLSR--LESSKFTPN 127
Query: 217 V---------------EAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF--K 259
V EA K V +A ++++D LVK + +KV+ + +
Sbjct: 128 VFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVAR 187
Query: 260 DCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRK 319
P + + LI G C+ A + EM ++ P VV YT I C E +
Sbjct: 188 GASP-NVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISE 246
Query: 320 VDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIF 379
+ + M+ G P++ TY +M K + +AL++Y++M D LP+ + LI
Sbjct: 247 AESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILID 306
Query: 380 ILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKP 439
L K + A + DM GVVPN+ YN +I C AL L ++E+ P
Sbjct: 307 GLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILP 366
Query: 440 DCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFF 499
D TY+ L+K C RM+ + LL M K +A TY +L+ G + G +E A
Sbjct: 367 DVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVC 426
Query: 500 EEMISKGIVPYHSTYKML 517
+M KGI P T+ L
Sbjct: 427 SQMTEKGIEPNIITFSTL 444
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 108/259 (41%), Gaps = 27/259 (10%)
Query: 238 LMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGF 297
L +LV+G + HA + F+ I L + LI + T V DA MF +
Sbjct: 643 LKSSLVEGKQM-HALVINFGFEPIIFLQTS----LISMYSATGNVADAH----NMFDEIP 693
Query: 298 SPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGK--AKQINEA 355
S +++S+T I Y + K ++MQ +P ++T T+ + A A + E
Sbjct: 694 SKNLISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEW 753
Query: 356 LKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISS 415
+ Y + + D D +SLI + SK G + A V+PN +T+ ++ +
Sbjct: 754 IHAYIRHRGLD--TDLCLNNSLINMYSKCGEIGTARRF------SLVLPNDVTFMGVLMA 805
Query: 416 ACARSEEENALKLLQKMEEDL-CKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSM 474
E + + M+ED +P + ++ + CR LLT ++ + M
Sbjct: 806 CSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAG-------LLTEAYEFILKM 858
Query: 475 DAGTYASLVRGLIESGKLE 493
A + R L+ + L+
Sbjct: 859 PVRPNAVVWRTLLGACSLQ 877
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 101/400 (25%), Positives = 183/400 (45%), Gaps = 20/400 (5%)
Query: 145 FGFFTW--AKTQTGYMHTPEMYNTMVDVLGK----SKKFCLMWELVKEMDELNNGYVSLA 198
F FFTW + + + HT Y TM+ L S+ L+ +V + + V A
Sbjct: 1 FSFFTWLSSPANSTFRHTLHSYCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASXVFAA 60
Query: 199 TMST-------------IMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKG 245
+ T ++ + G DA+E +R +++ +++ L+K
Sbjct: 61 ILETKGTQRSDIYVFSGLIXAYLESGFLRDAIECYRLTREHKFXXPFDTCRKVLEHLMKL 120
Query: 246 NSVEHAYKVFLEFKDC-IPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSY 304
+ + + E +C P S FNIL+H +CK + A + + G P VVSY
Sbjct: 121 KYFKLVWGFYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSY 180
Query: 305 TCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKS 364
+ Y R D + M G +P V TY+++++ L K ++++A +++++M
Sbjct: 181 NTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLV 240
Query: 365 DDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEEN 424
+P+ +++LI K GRV A EI++ M Q ++P+++TYN +I C + + +
Sbjct: 241 KGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQ 300
Query: 425 ALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVR 484
A L+ +M KPD TY L+ CC++ + M + ++ +D Y +L+
Sbjct: 301 ANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALIS 360
Query: 485 GLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEKK 524
GL + G+ A M+S G+ P TY M+ + KK
Sbjct: 361 GLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKK 400
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 127/255 (49%), Gaps = 3/255 (1%)
Query: 196 SLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVF 255
S+ + +T+M +R G D+ M GV+ D SVL++ L K ++ A ++F
Sbjct: 176 SVVSYNTLMNGYIRLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELF 235
Query: 256 LEF--KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCR 313
E K +P + F LI G CK +VD A + K+M Q PD+++Y I C+
Sbjct: 236 DEMLVKGLVP-NXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCK 294
Query: 314 EKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSF 373
+ D ++ +D + EM KG KP ITYT ++ K +B A + +M ++ D
Sbjct: 295 KGDLKQANDLIXEMSMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVA 354
Query: 374 YSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKME 433
Y++LI L + GR DA ++ M G+ P+ TY +I+ C + + KLL++M+
Sbjct: 355 YTALISGLCQEGRXVDAEKMLRXMLSVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQ 414
Query: 434 EDLCKPDCETYAPLL 448
D P TY L+
Sbjct: 415 RDGHVPSVVTYNVLM 429
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 150/348 (43%), Gaps = 37/348 (10%)
Query: 171 LGKSKKFCLMWELVKEMDELNNGY-VSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVE 229
L K K F L+W KE+ L GY SL + +M R + G A F + K+G+
Sbjct: 117 LMKLKYFKLVWGFYKEI--LECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLR 174
Query: 230 KDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKVDDAQKAM 289
+ +N L++G+ + +D+ +
Sbjct: 175 PSVVS----------------------------------YNTLMNGYIRLGDLDEGFRLK 200
Query: 290 KEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKA 349
M G PDV +Y+ I C+E ++ EM KG P+ +T+T ++ K
Sbjct: 201 SAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKN 260
Query: 350 KQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLTY 409
+++ A+++Y++M S LPD Y+ LI+ L K G +K AN++ +M +G+ P+ +TY
Sbjct: 261 GRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITY 320
Query: 410 NTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFK 469
T+I C + A + +M E+ + D Y L+ C++ R +L M
Sbjct: 321 TTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLS 380
Query: 470 NDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKML 517
+ DA TY ++ + G + +EM G VP TY +L
Sbjct: 381 VGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVL 428
>gi|15233137|ref|NP_191711.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75183498|sp|Q9M316.1|PP292_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g61520, mitochondrial; Flags: Precursor
gi|6850843|emb|CAB71082.1| putative protein [Arabidopsis thaliana]
gi|332646696|gb|AEE80217.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 766
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 180/375 (48%), Gaps = 14/375 (3%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGM 223
+N ++ LG++ M +LV +MDE+ + T+ ++ L + R D+A+E F M
Sbjct: 297 FNALLSCLGRNMDISRMNDLVLKMDEVKI-RPDVVTLGILINTLCKSRRVDEALEVFEKM 355
Query: 224 KKYG------VEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK---DCIPLSSQIFNILIH 274
+ ++ D+ + L+D L K ++ A ++ + K C P ++ +N LI
Sbjct: 356 RGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAP-NAVTYNCLID 414
Query: 275 GWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKP 334
G+C+ K++ A++ + M + P+VV+ + CR +M+++G K
Sbjct: 415 GYCRAGKLETAKEVVSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKG 474
Query: 335 SVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIF 394
+V+TY ++HA + +A+ YEKM C PD Y +LI L + R DA +
Sbjct: 475 NVVTYMTLIHACCSVSNVEKAMYWYEKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVV 534
Query: 395 EDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRK 454
E +K+ G ++L YN +I C ++ E ++L ME++ KPD TY L+ +
Sbjct: 535 EKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYNTLISFFGKH 594
Query: 455 KRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEM-ISKGIVPYHST 513
K + + ++ M ++ + TY +++ G+L+ A F++M + + P
Sbjct: 595 KDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMGLHSKVNPNTVI 654
Query: 514 YKMLEEKLEKKRLGN 528
Y +L K LGN
Sbjct: 655 YNILINAFSK--LGN 667
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 91/323 (28%), Positives = 162/323 (50%), Gaps = 16/323 (4%)
Query: 164 YNTMVDVLGKSKKFCLMWELVKEM--DELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFR 221
YN ++D ++ K E+V M DE+ V T++TI+ + R + AV F
Sbjct: 409 YNCLIDGYCRAGKLETAKEVVSRMKEDEIKPNVV---TVNTIVGGMCRHHGLNMAVVFFM 465
Query: 222 GMKKYGVEKDTRALSVLMDTLVKGNSVEHA---YKVFLEFKDCIPLSSQIFNILIHGWCK 278
M+K GV+ + L+ ++VE A Y+ LE C P ++I+ LI G C+
Sbjct: 466 DMEKEGVKGNVVTYMTLIHACCSVSNVEKAMYWYEKMLE-AGCSP-DAKIYYALISGLCQ 523
Query: 279 TRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVIT 338
R+ DA + ++++ + GFS D+++Y I +C + + KV + L +M+++G KP IT
Sbjct: 524 VRRDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSIT 583
Query: 339 YTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMK 398
Y ++ GK K ++ E+M+ D P + Y ++I G + +A ++F+DM
Sbjct: 584 YNTLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYCSVGELDEALKLFKDMG 643
Query: 399 KQGVV-PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRM 457
V PN + YN +I++ AL L ++M+ + +P+ ETY L K K +
Sbjct: 644 LHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQG 703
Query: 458 KVLNFLLTHMFK-----NDVSMD 475
+ L L+ M + N ++M+
Sbjct: 704 ETLLKLMDEMVEQSCEPNQITME 726
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 177/389 (45%), Gaps = 53/389 (13%)
Query: 176 KFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRAL 235
K ++E+ KE N +++ + ++R R G + +V + + K+++
Sbjct: 135 KLLRLYEIAKE----KNIPLTVVATNLLIRWFGRMGMVNQSVLVYERLDSN--MKNSQVR 188
Query: 236 SVLMDTLVKGNSVEHAYKVF---LEFKDCIPLSSQIFNILIHGWCKTRKVDDAQ--KAMK 290
+V++D L++ V+ A+KV L+ + P + +I++H K R + + + +
Sbjct: 189 NVVVDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIALIS 248
Query: 291 EMFQQGFSPDVVSYTCFIEHYC-----------------------------------REK 315
G SP+ V T FI C R
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARANAAWDILSDLMKNKTPLEAPPFNALLSCLGRNM 308
Query: 316 DFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKM---KSDD---CLP 369
D +++D + +M E +P V+T I+++ L K+++++EAL+V+EKM ++DD
Sbjct: 309 DISRMNDLVLKMDEVKIRPDVVTLGILINTLCKSRRVDEALEVFEKMRGKRTDDGNVIKA 368
Query: 370 DTSFYSSLIFILSKAGRVKDANEIFEDMK-KQGVVPNVLTYNTMISSACARSEEENALKL 428
D+ +++LI L K GR+K+A E+ MK ++ PN +TYN +I C + E A ++
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKLEERCAPNAVTYNCLIDGYCRAGKLETAKEV 428
Query: 429 LQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIE 488
+ +M+ED KP+ T ++ CR + + M K V + TY +L+
Sbjct: 429 VSRMKEDEIKPNVVTVNTIVGGMCRHHGLNMAVVFFMDMEKEGVKGNVVTYMTLIHACCS 488
Query: 489 SGKLELACSFFEEMISKGIVPYHSTYKML 517
+E A ++E+M+ G P Y L
Sbjct: 489 VSNVEKAMYWYEKMLEAGCSPDAKIYYAL 517
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 103/224 (45%), Gaps = 8/224 (3%)
Query: 212 RYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFN 270
R DA+ +K+ G D A ++L+ N+ E Y++ + K+ S +N
Sbjct: 526 RDHDAIRVVEKLKEGGFSLDLLAYNMLIGLFCDKNNTEKVYEMLTDMEKEGKKPDSITYN 585
Query: 271 ILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEK 330
LI + K + + ++ M++M + G P V +Y I+ YC ++D+ LK ++
Sbjct: 586 TLISFFGKHKDFESVERMMEQMREDGLDPTVTTYGAVIDAYC---SVGELDEALKLFKDM 642
Query: 331 G----CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGR 386
G P+ + Y I+++A K +AL + E+MK P+ Y++L L++ +
Sbjct: 643 GLHSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLNEKTQ 702
Query: 387 VKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQ 430
+ ++ ++M +Q PN +T ++ E K +Q
Sbjct: 703 GETLLKLMDEMVEQSCEPNQITMEILMERLSGSDELVKLRKFMQ 746
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 163/321 (50%), Gaps = 3/321 (0%)
Query: 201 STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKV--FLEF 258
+ ++ + + G DA F ++K G+ T + + L++ L K +++ +++ +E
Sbjct: 227 NILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEE 286
Query: 259 KDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFR 318
P +++LIHG CK ++D A++ EM Q+G P+ +++T I+ R +
Sbjct: 287 NRIYP-DVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMD 345
Query: 319 KVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLI 378
+T +M G KP ++ Y +++ L K +N+A K+ ++MK PD Y++LI
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405
Query: 379 FILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCK 438
K G ++ A EI + M ++GVV + + + +IS C +A + L++M E K
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465
Query: 439 PDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSF 498
PD TY ++ C+K +K+ LL M N TY L+ GL + G+++ A
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525
Query: 499 FEEMISKGIVPYHSTYKMLEE 519
E M++ G+ P TY +L E
Sbjct: 526 LEAMLNLGVTPDDITYNILLE 546
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 158/315 (50%), Gaps = 2/315 (0%)
Query: 225 KYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPLSSQIFNILIHGWCKTRKVD 283
+YG + ++L++ K S+ A +F E K + ++ FN LI+G CK+R +D
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275
Query: 284 DAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVM 343
+ + K M + PDV +Y+ I C+E + EMQ++G +P+ IT+T ++
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALI 335
Query: 344 HALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVV 403
++++++ A+ Y +M + PD Y++L+ L K G V A ++ ++MK G+
Sbjct: 336 DGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMK 395
Query: 404 PNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKVLNFL 463
P+ +TY T+I C + E+A+++ + M E+ D + L+ CR R++
Sbjct: 396 PDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERT 455
Query: 464 LTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEEKLEK 523
L M + + D TY ++ G + G +++ +EM G P TY +L L K
Sbjct: 456 LREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCK 515
Query: 524 K-RLGNAKERINKLL 537
+ ++ NA + +L
Sbjct: 516 QGQMKNANMLLEAML 530
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 162/368 (44%), Gaps = 38/368 (10%)
Query: 156 GYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDD 215
G T +NT+++ L KS+ + L K M+E N Y + T S ++ L + GR D
Sbjct: 253 GLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEE-NRIYPDVFTYSVLIHGLCKEGRLDV 311
Query: 216 AVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHG 275
A + F M++ G+ + + L+D G
Sbjct: 312 AEQLFDEMQQRGLRPNGITFTALID----------------------------------G 337
Query: 276 WCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPS 335
++R++D A +M G PD+V Y + C+ D K + EM+ G KP
Sbjct: 338 QYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPD 397
Query: 336 VITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFE 395
ITYT ++ K + A+++ + M + + D +++LI + GRV+DA
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLR 457
Query: 396 DMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKK 455
+M + G+ P+ TY +I C + + KLL++M+ + KP TY L+ C++
Sbjct: 458 EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQG 517
Query: 456 RMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYK 515
+MK N LL M V+ D TY L+ G ++GK E E KG++ ++ Y
Sbjct: 518 QMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE---KGLIVDYAYYT 574
Query: 516 MLEEKLEK 523
L + K
Sbjct: 575 SLVSEYNK 582
Score = 111 bits (278), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 128/275 (46%), Gaps = 37/275 (13%)
Query: 291 EMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIVMHALGKAK 350
E+ + GF P V Y I +C+E R E++++G +P+ +++ +++ L K++
Sbjct: 213 EILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSR 272
Query: 351 QINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGVVPNVLT-- 408
++E ++ + M+ + PD YS LI L K GR+ A ++F++M+++G+ PN +T
Sbjct: 273 NLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFT 332
Query: 409 ---------------------------------YNTMISSACARSEEENALKLLQKMEED 435
YNT+++ C + A KL+ +M+
Sbjct: 333 ALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMV 392
Query: 436 LCKPDCETYAPLLKMCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELA 495
KPD TY L+ C++ ++ + M + V +D + +L+ G G++ A
Sbjct: 393 GMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDA 452
Query: 496 CSFFEEMISKGIVPYHSTYKMLEEKLEKKRLGNAK 530
EM+ G+ P +TY M+ + KK GN K
Sbjct: 453 ERTLREMVEAGMKPDDATYTMVIDGYCKK--GNVK 485
>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
Length = 637
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 90/372 (24%), Positives = 176/372 (47%), Gaps = 11/372 (2%)
Query: 162 EMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYV--SLATMSTIMRRLVRGGRYDDAVEA 219
+YN ++D L + ++ +V D + V ++ T + ++R L + R D A +
Sbjct: 123 RVYNHLLDALLREN---MVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 179
Query: 220 FRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKT 279
M + G D + ++ + K VE A E +P+ + +N ++H C
Sbjct: 180 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAET---VPVQAS-YNAVVHALCGE 235
Query: 280 RKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITY 339
++ + + EM Q+G P+VV+YT ++ +C+ ++ R L M GC P+V+T+
Sbjct: 236 FRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTF 295
Query: 340 TIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKK 399
T ++ + ++++AL ++ M + P T Y+ LI L G +K A + F MK+
Sbjct: 296 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKR 355
Query: 400 QGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMCCRKKRMKV 459
++PN TY+T++ + + A+ + +M+ CKP+ Y ++ + C+K
Sbjct: 356 NALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQ 415
Query: 460 LNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYHSTYKMLEE 519
L+ M ++ + T+ +L+ L + G++ A + F M G P TY L
Sbjct: 416 AESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLH 475
Query: 520 KLEKKRLGNAKE 531
L ++ GN K+
Sbjct: 476 GLFRE--GNHKD 485
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 169/366 (46%), Gaps = 2/366 (0%)
Query: 153 TQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGR 212
Q G Y T+VD K+++ + ++ M + ++ T + +++ G+
Sbjct: 249 VQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMG-CTPNVLTFTALVKGFFEDGK 307
Query: 213 YDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFK-DCIPLSSQIFNI 271
DA+ + M G T + +VL+ L ++ A F K + + ++ ++
Sbjct: 308 VHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYST 367
Query: 272 LIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKG 331
L+ G+ +D A EM G P+VV YT I+ C++ F + + + +M
Sbjct: 368 LVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDN 427
Query: 332 CKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDAN 391
C P+ +T+ ++ L ++ AL V+ M+ + C P+ Y+ L+ L + G KDA
Sbjct: 428 CPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAF 487
Query: 392 EIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETYAPLLKMC 451
+ +M G +++TYNT+I+ C ++A+ LL +M +PD T+ ++
Sbjct: 488 AMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAY 547
Query: 452 CRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMISKGIVPYH 511
C++ ++ + LL M + + Y L+ L GKL A + +M+ +GI P
Sbjct: 548 CKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNE 607
Query: 512 STYKML 517
+T+ +L
Sbjct: 608 ATWNVL 613
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 87/335 (25%), Positives = 148/335 (44%), Gaps = 10/335 (2%)
Query: 207 LVRGGRYDDAVEAFRGMKKYGV-EKDTRALSVLMDTLVKGNSVEHAYKVFLEF-KDCIPL 264
R G D A++ F G + R + L+D L++ N V V+ K +
Sbjct: 96 FARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDP 155
Query: 265 SSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTL 324
+ +N+LI C+ +VD A+K + EM ++G PD VS+ + C+ + L
Sbjct: 156 NVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL 215
Query: 325 KEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKA 384
E P +Y V+HAL ++ E V +M P+ Y++++ KA
Sbjct: 216 AETV-----PVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKA 270
Query: 385 GRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKMEEDLCKPDCETY 444
++ A I M G PNVLT+ ++ + +AL + M ++ P +Y
Sbjct: 271 RELRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISY 330
Query: 445 APLLK-MCCRKKRMKVLNFLLTHMFKNDVSMDAGTYASLVRGLIESGKLELACSFFEEMI 503
L++ +CC L+F M +N + +A TY++LV G +G L+ A + EM
Sbjct: 331 NVLIRGLCCIGDLKGALDF-FNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMK 389
Query: 504 SKGIVPYHSTY-KMLEEKLEKKRLGNAKERINKLL 537
S G P Y M++ +K A+ I+K+L
Sbjct: 390 SSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKML 424
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 111/274 (40%), Gaps = 35/274 (12%)
Query: 163 MYNTMVDVLGKSKKFCLMWELVKEMDELNNGYVSLATMSTIMRRLVRGGRYDDAVEAFRG 222
+Y M+DVL K F L+ +M ++N + T +T++ RL GR A+ F G
Sbjct: 399 VYTNMIDVLCKKMMFDQAESLIDKM-LMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHG 457
Query: 223 MKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLEFKDCIPLSSQIFNILIHGWCKTRKV 282
M++ G + R +N L+HG +
Sbjct: 458 MRRNGCHPNDRT----------------------------------YNELLHGLFREGNH 483
Query: 283 DDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDFRKVDDTLKEMQEKGCKPSVITYTIV 342
DA + EM GF +V+Y I C+ + L M +G +P T+ +
Sbjct: 484 KDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAI 543
Query: 343 MHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSLIFILSKAGRVKDANEIFEDMKKQGV 402
+HA K +++ A + +M + +C + Y+ LI L G++ +A M +G+
Sbjct: 544 IHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGI 603
Query: 403 VPNVLTYNTMISSACARSEEENALKLLQKMEEDL 436
PN T+N ++ + + L + + EDL
Sbjct: 604 CPNEATWNVLVRAIFTNIGTIGPIHLFKYIVEDL 637
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 15/313 (4%)
Query: 144 AFGFFTWAKTQTGYMHTPEMYNTMVDVLGKSKKFCLMWELVKEMDELN----NGYVSLAT 199
A + W G+ + YN ++ + C + +L +D N N + AT
Sbjct: 311 ALSMWHW-MVDEGWAPSTISYNVLI------RGLCCIGDLKGALDFFNSMKRNALLPNAT 363
Query: 200 M-STIMRRLVRGGRYDDAVEAFRGMKKYGVEKDTRALSVLMDTLVKGNSVEHAYKVFLE- 257
ST++ G D A+ + MK G + + + ++D L K + A + +
Sbjct: 364 TYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKM 423
Query: 258 FKDCIPLSSQIFNILIHGWCKTRKVDDAQKAMKEMFQQGFSPDVVSYTCFIEHYCREKDF 317
D P ++ FN LI C +V A M + G P+ +Y + RE +
Sbjct: 424 LMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNH 483
Query: 318 RKVDDTLKEMQEKGCKPSVITYTIVMHALGKAKQINEALKVYEKMKSDDCLPDTSFYSSL 377
+ + EM G + S++TY V++ L + A+ + +M PD ++++
Sbjct: 484 KDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAI 543
Query: 378 IFILSKAGRVKDANEIFEDMKKQGVVPNVLTYNTMISSACARSEEENALKLLQKM-EEDL 436
I K G+V A + M NV+ Y +IS C + + NA+ L KM E +
Sbjct: 544 IHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGI 603
Query: 437 CKPDCETYAPLLK 449
C P+ T+ L++
Sbjct: 604 C-PNEATWNVLVR 615
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.133 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,082,022,725
Number of Sequences: 23463169
Number of extensions: 323980391
Number of successful extensions: 1089270
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7174
Number of HSP's successfully gapped in prelim test: 5109
Number of HSP's that attempted gapping in prelim test: 923936
Number of HSP's gapped (non-prelim): 66498
length of query: 546
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 398
effective length of database: 8,886,646,355
effective search space: 3536885249290
effective search space used: 3536885249290
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 80 (35.4 bits)