BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009013
(546 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224130170|ref|XP_002328671.1| predicted protein [Populus trichocarpa]
gi|222838847|gb|EEE77198.1| predicted protein [Populus trichocarpa]
Length = 667
Score = 790 bits (2039), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/554 (69%), Positives = 455/554 (82%), Gaps = 9/554 (1%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
MTRPK LPNE+L+DL+VS ATKLQCYR+LG YFKQSAK+LEQQ+A+EARFYGALIRLQQN
Sbjct: 115 MTRPKPLPNEILADLAVSTATKLQCYRNLGKYFKQSAKALEQQVAREARFYGALIRLQQN 174
Query: 61 WKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNS 120
WKVKRQRVAA A GNEGF IDLFDNSLYDS V +PSSLSTIRIDHDS GMLAINLP S
Sbjct: 175 WKVKRQRVAAIAPGNEGFMIDLFDNSLYDSVAVFQPSSLSTIRIDHDSDGMLAINLPSKS 234
Query: 121 CRSFRFGFLGVQSGDSSKQCSKVKNSCSPR-PSKEA-KESVNDDECVREKHSLLREVHQA 178
C S FGFL S + K+ +K+K S + PSK KES++D+ECV++ H LLR+VH+
Sbjct: 235 CHSLVFGFLSGHS-NVPKKSNKIKTHGSLKNPSKNPEKESLSDNECVKDTHLLLRKVHRT 293
Query: 179 IFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVN 238
IF EQVFD+VNR A QS G+NVTGI+ENYLQL IG GISIF+S++PS+QGD ++DS
Sbjct: 294 IFDEQVFDMVNRGAVNQSSGLNVTGIQENYLQLCIGPGISIFISIVPSDQGDQAIDSEGP 353
Query: 239 QNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPIS 298
+N+ES ++PLDS DGVKLAEEK + L K +PN +TYEIYL+Q+FHEY++ AK +P
Sbjct: 354 ENLESAVVPLDSFDGVKLAEEKHNSLTKKPRFPNCITYEIYLKQIFHEYVFVEAKGRPSF 413
Query: 299 TGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHSRTS 358
TGTR+ G P DGSGLL HFCLSL+HRI SNKV +ELEN VC VPYLHL+SHPTWHSR+S
Sbjct: 414 TGTRMPGQPANDGSGLLSHFCLSLSHRIISNKVLMELENVVCRVPYLHLISHPTWHSRSS 473
Query: 359 SWTVFLKVPQSILHAESNSRTAE------TAKSHFRTNVVVNDDCIHVEGEGTPNVVGLF 412
+WT+F+K+P SILHA S +RT + KS F T VVV+DDCI++E EG PNVVGLF
Sbjct: 474 AWTIFMKIPPSILHASSQTRTPDIQNMKNVVKSEFWTKVVVHDDCINIEAEGAPNVVGLF 533
Query: 413 KGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQ 472
K S+D S NKYDC+L DLPVIILQQVASQVIRWLHEEAL VGIKANRDFL LSFEL+Q
Sbjct: 534 KDSSDDKCSTNKYDCNLDDLPVIILQQVASQVIRWLHEEALAVGIKANRDFLCLSFELEQ 593
Query: 473 GETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDVLYS 532
GE ++LVAHVDPED +GCISWWL MEDGFA E+KL ++I+D AS+Y+KFLG+L LDVLYS
Sbjct: 594 GEILNLVAHVDPEDTQGCISWWLTMEDGFAEEKKLHMNIADGASEYRKFLGYLPLDVLYS 653
Query: 533 TLMDLVSLCGGGSH 546
TLMDLVSLCGGGSH
Sbjct: 654 TLMDLVSLCGGGSH 667
>gi|225445450|ref|XP_002285089.1| PREDICTED: uncharacterized protein LOC100266409 [Vitis vinifera]
gi|147821405|emb|CAN63500.1| hypothetical protein VITISV_011675 [Vitis vinifera]
gi|297738929|emb|CBI28174.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 785 bits (2026), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/555 (69%), Positives = 452/555 (81%), Gaps = 9/555 (1%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
MTRPK LPNEVLSDL VSAATKLQC+RHL YFKQSAK+LEQQIA+EARFYGALIRLQQN
Sbjct: 106 MTRPKPLPNEVLSDLGVSAATKLQCFRHLSKYFKQSAKALEQQIAREARFYGALIRLQQN 165
Query: 61 WKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNS 120
WKVKRQRVAA A GNEGF+IDLF NSL+D V RPSSLST+R+DHDSAGMLA++LPPNS
Sbjct: 166 WKVKRQRVAASAPGNEGFSIDLFSNSLHDPVAVFRPSSLSTVRVDHDSAGMLAVHLPPNS 225
Query: 121 CRSFRFGFLGVQSGDSSKQCSKVKNSCSPR-PSKEAKESVNDDECVREKHSLLREVHQAI 179
CR+ FGFLG G+ K+ SK K PSKE K+ ++D+ECV+E HS+LRE HQAI
Sbjct: 226 CRALHFGFLGGHLGNIPKEPSKTKTYGPDELPSKEIKKPLSDNECVKETHSVLREGHQAI 285
Query: 180 FYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVNQ 239
F EQVFD+VNREAF S GVNVTGIRENYLQL IG G S+F+SL+PS Q + + D Q
Sbjct: 286 FDEQVFDLVNREAFNSSSGVNVTGIRENYLQLNIGQGASVFMSLVPSGQDEKTADGMGMQ 345
Query: 240 NVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPIST 299
N+ES ILP+D+ DGVKL++ K D +K G+PN ++ EIYL+Q+FHE+++ RAK+K IS
Sbjct: 346 NLESAILPMDTFDGVKLSDGKHDNDKKKSGFPNRISSEIYLKQLFHEHVFVRAKDKHISA 405
Query: 300 G-TRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHSRTS 358
G T+ S P KDG GLLGHFC+SLAHRIFS+KV +ELEN V VPYLHL+SHPTWHSRTS
Sbjct: 406 GRTQPSSQPAKDGFGLLGHFCMSLAHRIFSSKVLMELENLVSRVPYLHLLSHPTWHSRTS 465
Query: 359 SWTVFLKVPQSILHAESNSRTAET------AKSHFRTNVVVNDDCIHVEGEGTPNVVGLF 412
SWT+ +KVP+S H +RT++ K+HFRT VV+NDDCI+VEG+G PNVVGLF
Sbjct: 466 SWTLLMKVPESSFHPGCQTRTSDIHNVKNIIKTHFRTKVVINDDCINVEGDGAPNVVGLF 525
Query: 413 KGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQ 472
KG SED+ SMN+YDCDLAD+PVI+LQQVASQVIRWLHEEAL VGIKANRDFL LSFE+DQ
Sbjct: 526 KGSSEDVCSMNRYDCDLADIPVILLQQVASQVIRWLHEEALKVGIKANRDFLCLSFEMDQ 585
Query: 473 GETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDVLYS 532
GE +SLVAHV+P+D +GCISWWLVM+DGF+ + K D D S+Y+KFLGHLSL+VLYS
Sbjct: 586 GEMLSLVAHVNPDDPQGCISWWLVMDDGFSEDLKFHTDAPDGGSEYRKFLGHLSLEVLYS 645
Query: 533 TLMDLVSLC-GGGSH 546
TLMDLVSLC GGG H
Sbjct: 646 TLMDLVSLCNGGGRH 660
>gi|356513925|ref|XP_003525658.1| PREDICTED: uncharacterized protein LOC100810597 [Glycine max]
Length = 659
Score = 716 bits (1848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/551 (62%), Positives = 434/551 (78%), Gaps = 11/551 (1%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
MTRPK LPNE LSDL+VSAATKLQCYRH+G YFKQSAK+ EQQ+A+EARFYGALIRLQQN
Sbjct: 110 MTRPKLLPNEALSDLAVSAATKLQCYRHVGKYFKQSAKAFEQQVAREARFYGALIRLQQN 169
Query: 61 WKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNS 120
WKVKRQR AA GNEGFT DLFDNS YD A + R S+ST+R++HD+AG LAIN+ P+
Sbjct: 170 WKVKRQRQAAIVPGNEGFTFDLFDNS-YDQAAIIRSLSMSTVRVNHDAAGNLAINVSPDL 228
Query: 121 CRSFRFGFLGVQSGDSSKQCSKVKNSCSPRPS--KEAKESVNDDECVREKHSLLREVHQA 178
C S +FGF+G QS D+ ++ ++ K+ S + K +ES++D+ECV++ HSLLREVH+A
Sbjct: 229 CHSLQFGFVGAQSDDTRRKSNQNKSHFSGELNLGKTGEESLSDEECVKKTHSLLREVHEA 288
Query: 179 IFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVN 238
IF EQVFD+VNREAF GV+VTGIRENYLQL +G S++L+L+ ++Q +V+ +
Sbjct: 289 IFNEQVFDLVNREAFNTVAGVSVTGIRENYLQLSLGQETSVYLTLVSNSQDHSTVEGELT 348
Query: 239 QNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPIS 298
N E+ ILPL+S DG+K E K + K G + N + YEIY+QQ+FHEY++G+ +KP S
Sbjct: 349 DNAENAILPLESSDGMK-REAKQNTSNK-GQFSNSICYEIYIQQIFHEYIFGKGGDKPSS 406
Query: 299 TGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHSRTS 358
+G R+SG KDGS LLGHF SLAHRIFS KV ELEN VC VPY+ L+S+PTWHSR S
Sbjct: 407 SGNRLSGIQAKDGSSLLGHFFKSLAHRIFSTKVLAELENVVCKVPYIQLISNPTWHSRAS 466
Query: 359 SWTVFLKVPQSILHAESNSRTAE-----TAKSHFRTNVVVNDDCIHVEGEGTPNVVGLFK 413
SWT++++VPQSIL S ++T++ K F T VVVNDDCI+V+ EG+PNV GLFK
Sbjct: 467 SWTLYMEVPQSILRG-SQTKTSDYYEKNAVKRQFWTKVVVNDDCINVKAEGSPNVAGLFK 525
Query: 414 GRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQG 473
G+ E+ S+NKY+C+LADLPVIILQQVASQ+I WL++EA+MVGIKANRDFL LS EL+QG
Sbjct: 526 GKIEETHSINKYNCNLADLPVIILQQVASQIINWLYQEAMMVGIKANRDFLCLSLELEQG 585
Query: 474 ETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDVLYST 533
ET+ LVA VDPED GCISWWLVMED FA E+KL + I+D AS+Y+KFLGHLSLD+LY+T
Sbjct: 586 ETLGLVASVDPEDSEGCISWWLVMEDSFAEEQKLHMSITDGASEYRKFLGHLSLDLLYAT 645
Query: 534 LMDLVSLCGGG 544
L+DLVSLC GG
Sbjct: 646 LIDLVSLCSGG 656
>gi|449447591|ref|XP_004141551.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Cucumis sativus]
gi|449481525|ref|XP_004156208.1| PREDICTED: mediator of RNA polymerase II transcription subunit
17-like [Cucumis sativus]
Length = 662
Score = 714 bits (1842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 356/555 (64%), Positives = 433/555 (78%), Gaps = 17/555 (3%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
MTRPK LPNEVL+DL VS ATKLQC+RHLG YFKQSAK LE+Q+A+EARFYGALIRLQQN
Sbjct: 108 MTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQN 167
Query: 61 WKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNS 120
WKVKRQRVAAPA NEGFTIDLFDNS D + V RPSS STIR+DHDS+GMLAINLPPNS
Sbjct: 168 WKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSS-STIRVDHDSSGMLAINLPPNS 226
Query: 121 CRSFRFGFLGVQSGDSSKQCSKVKNSCSPRPSKEA-----KESVNDDECVREKHSLLREV 175
C S RFGFL SG + + + + S PS ++ KE NDDE ++E +SLLR+V
Sbjct: 227 CHSLRFGFL---SGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYIKETNSLLRQV 283
Query: 176 HQAIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDS 235
H AIF EQVFD+VN+EAF S+G+NVTGIRENYLQL I G S+F+SL+PS Q +V+
Sbjct: 284 HHAIFSEQVFDLVNQEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVPSGQSSQTVEG 343
Query: 236 WVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNK 295
++ +E+ LP DS DG++L + + D L K PN +T+EIYLQQ+FHE ++ ++ ++
Sbjct: 344 ANSEILENASLPFDSLDGIELPD-RSDPLEKKLRNPNHITFEIYLQQIFHELVFVKSNDR 402
Query: 296 PISTGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHS 355
PIS+ +R SG + DGSGLLGHFCLSLAHR+F+N V +ELEN V VP+L L+SHPTW+S
Sbjct: 403 PISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNS 462
Query: 356 RTSSWTVFLKVPQSILHAES-NSRTAE------TAKSHFRTNVVVNDDCIHVEGEGTPNV 408
R SSWT F++VP SILH S +RT++ K+ F T VVVNDDCI +EGEG PNV
Sbjct: 463 RKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQFLTKVVVNDDCITIEGEGAPNV 522
Query: 409 VGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSF 468
VGLF G S+D+ S N+Y CDLADLPVIIL QVASQ+I WLHEEAL+ GIKANRDFLSLSF
Sbjct: 523 VGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKANRDFLSLSF 582
Query: 469 ELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLD 528
EL+QGET+ LVAHVDPED +GC+SWWLVM+DG +RKL+ + SD +Y+KFLGHLSL+
Sbjct: 583 ELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYRKFLGHLSLE 642
Query: 529 VLYSTLMDLVSLCGG 543
VL+STLMDLVSLC G
Sbjct: 643 VLHSTLMDLVSLCSG 657
>gi|356563049|ref|XP_003549778.1| PREDICTED: uncharacterized protein LOC100778422 [Glycine max]
Length = 660
Score = 709 bits (1829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/551 (62%), Positives = 431/551 (78%), Gaps = 11/551 (1%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
MTRPK LPNE LSDL+VSAATKLQCYRH+G YFKQSAK+ EQQ+A+EARFYGALIRLQQN
Sbjct: 111 MTRPKLLPNEALSDLAVSAATKLQCYRHVGKYFKQSAKAFEQQVAREARFYGALIRLQQN 170
Query: 61 WKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNS 120
WKVKRQR AA GNEGFT DL DNS YD A + R S+ST+R++HD+AGMLAIN+ P+
Sbjct: 171 WKVKRQRQAAIVPGNEGFTFDLLDNS-YDQAAIIRSLSMSTVRVNHDAAGMLAINVSPDL 229
Query: 121 CRSFRFGFLGVQSGDSSKQCSKVKNSCSPRPS--KEAKESVNDDECVREKHSLLREVHQA 178
C S +FGF+G QS D+ ++ ++ K+ S + + +ES++D+ECV++ +SLLREVH+A
Sbjct: 230 CHSLQFGFVGAQSDDTWRKSNENKSHFSGEHNLGEMGEESLSDEECVKKTNSLLREVHEA 289
Query: 179 IFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVN 238
IF EQVFD+VNREAF GV+VTGIRENYLQL +G G S++L+L+ ++Q +V+ +N
Sbjct: 290 IFNEQVFDLVNREAFNTVAGVSVTGIRENYLQLSLGQGTSVYLTLVSNSQDHSTVEDELN 349
Query: 239 QNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPIS 298
NVE+ ILPL+S DG+K E K G + N + YEIY+QQ+FHE+++G+ K IS
Sbjct: 350 DNVENAILPLESSDGMK--REAKQNTSKKGQFSNSICYEIYIQQIFHEHIFGKGDEKAIS 407
Query: 299 TGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHSRTS 358
+G R+SG +DGS LLGHF SLAHRIFS KV ELEN VC VPYL L+S+PTW+SR S
Sbjct: 408 SGNRLSGVQARDGSSLLGHFFKSLAHRIFSTKVLAELENVVCKVPYLQLISNPTWNSRAS 467
Query: 359 SWTVFLKVPQSILHAESNSRTAE-----TAKSHFRTNVVVNDDCIHVEGEGTPNVVGLFK 413
SWT++++VPQSIL S ++T++ AK F T VVVNDDCI+V+ EG+PNV GLFK
Sbjct: 468 SWTLYMEVPQSILRG-SQTKTSDYYEKNAAKRQFWTKVVVNDDCINVKAEGSPNVAGLFK 526
Query: 414 GRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQG 473
G+ E+ S+NKY+C+LADLPVIILQQVASQ+I WL++EA+MVGIK NRDFL LS EL QG
Sbjct: 527 GKIEETHSINKYNCNLADLPVIILQQVASQIINWLYQEAMMVGIKVNRDFLCLSLELKQG 586
Query: 474 ETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDVLYST 533
ET+ LVA VDPED CISWWLVMED FA E+KL + I+D AS+Y+KFLGHLSLD+LY+T
Sbjct: 587 ETLGLVASVDPEDSEECISWWLVMEDSFAEEQKLHMSITDGASEYRKFLGHLSLDLLYAT 646
Query: 534 LMDLVSLCGGG 544
L+DLV LC GG
Sbjct: 647 LIDLVGLCSGG 657
>gi|357478013|ref|XP_003609292.1| hypothetical protein MTR_4g114100 [Medicago truncatula]
gi|355510347|gb|AES91489.1| hypothetical protein MTR_4g114100 [Medicago truncatula]
Length = 856
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/550 (59%), Positives = 413/550 (75%), Gaps = 8/550 (1%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
MTRPK+LPNE LSDL+VSAATKLQCYR +G YFKQSAK+ EQQ+A+EARFYGALIRLQQN
Sbjct: 109 MTRPKSLPNEALSDLAVSAATKLQCYRQVGKYFKQSAKAFEQQVAREARFYGALIRLQQN 168
Query: 61 WKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNS 120
WKVKRQR + GNEGFT DLFDNS YD + R SS+ST+R++HD+AGMLAIN+ P
Sbjct: 169 WKVKRQRQTSLVPGNEGFTFDLFDNS-YDQGAIVRSSSMSTVRVNHDAAGMLAINVSPEL 227
Query: 121 CRSFRFGFLGVQSGDSSKQCSKVKNSCSPRP--SKEAKESVNDDECVREKHSLLREVHQA 178
C S +FGF+ Q D K+ ++ ++ + ES +D+ECV++ HSLLR+VHQA
Sbjct: 228 CHSLQFGFVSAQPDDMQKKSNENQSHLLGEDCLGETGIESSSDEECVKKTHSLLRDVHQA 287
Query: 179 IFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVN 238
IF EQVFD+VNREAF S G +TGIRENYLQL +G G S++LSL+ + Q + +V+ +
Sbjct: 288 IFNEQVFDLVNREAFNTSTGFTLTGIRENYLQLSLGQGTSVYLSLVSTGQDNPTVEGELT 347
Query: 239 QNVESGIL-PLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPI 297
N + PL+S D V + + + + L+K G + N YEIY+QQ++HE+++GR KPI
Sbjct: 348 NNADDNAFSPLESSD-VLMHDAQQNTLKKKGRHSNSTCYEIYIQQIYHEHIFGRGSEKPI 406
Query: 298 STGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHSRT 357
S+G R+SG KDGS LL HF +SLAHRIFS K+ ELEN V VPYL L+S+PTWHSR
Sbjct: 407 SSGNRLSGAQAKDGSYLLSHFFMSLAHRIFSTKILAELENVVFKVPYLQLISNPTWHSRG 466
Query: 358 SSWTVFLKVPQSIL---HAESNSRTAETAKSHFRTNVVVNDDCIHVEGEGTPNVVGLFKG 414
SSWT+F++VP SIL +++ K F T VVV DDCI V+ EG+PNV GLFKG
Sbjct: 467 SSWTLFMEVPPSILRGCQVKTSDFENNAIKRQFWTKVVVIDDCISVKAEGSPNVSGLFKG 526
Query: 415 RSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQGE 474
+SED S+NKYDC+LADLPVIILQQVASQ+I WL+ EALMVGIKANRDFL LSFEL+QGE
Sbjct: 527 KSEDTHSINKYDCNLADLPVIILQQVASQIINWLYHEALMVGIKANRDFLCLSFELEQGE 586
Query: 475 TVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDVLYSTL 534
T+ LVA+VDP+D GCISW LVMED FA +KL +++D AS+Y+KFLG LSL++LY+TL
Sbjct: 587 TLGLVANVDPKDSDGCISWSLVMEDSFAEVQKLHTNLTDGASEYRKFLGPLSLELLYATL 646
Query: 535 MDLVSLCGGG 544
+DL++ GG
Sbjct: 647 IDLIAFVSGG 656
>gi|145358255|ref|NP_197517.3| RNA polymerase II transcription mediator [Arabidopsis thaliana]
gi|395406781|sp|F4K460.1|MED17_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit
17
gi|332005425|gb|AED92808.1| RNA polymerase II transcription mediator [Arabidopsis thaliana]
Length = 653
Score = 625 bits (1611), Expect = e-176, Method: Compositional matrix adjust.
Identities = 321/551 (58%), Positives = 406/551 (73%), Gaps = 21/551 (3%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
MTRPK +PNE+LSDL+VS ATKLQ YR+LG YFKQSAK+LEQ+I +EARFYGALIRLQ+N
Sbjct: 110 MTRPKPMPNEILSDLAVSTATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRN 169
Query: 61 WKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNS 120
WKVKRQR+ A + NEGFTIDL D+SLYD RPS+LSTIR+DHDSAGMLAIN+P +S
Sbjct: 170 WKVKRQRMLASNASNEGFTIDLSDSSLYDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDS 229
Query: 121 CRSFRFGFLGVQSGDSSKQCSKVKNSCSPR--PSKEAKESVNDDECVREKHSLLREVHQA 178
S RFG++G+ +S + + +S + P K S +DD+ V+E HSLLREVH++
Sbjct: 230 WYSLRFGYVGLNPIGNSNESDEHIDSTTGHDIPGTSEKLSASDDKYVKETHSLLREVHKS 289
Query: 179 IFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVN 238
IF EQ+FD++NREAF + +G N++G+REN++++ IG G S+F+SL PS + S
Sbjct: 290 IFAEQLFDMLNREAFNEGVGFNISGLRENFMEMSIGQGASLFVSLHPSGKNPSIKKS--- 346
Query: 239 QNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPIS 298
ES L ++S V+ AE D L+K G+PN +YEIYLQQ+FHE+ +G+AK++ S
Sbjct: 347 ---ESATLLIESSGRVEPAEGGDYRLKKL-GFPNRTSYEIYLQQIFHEHAFGKAKDQLKS 402
Query: 299 TGTRVSGPPTKD-GSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHSRT 357
R S KD SGLL HFCLSL HRIFSN+V V LE+ VC VPYLHL+SHPTW+SRT
Sbjct: 403 KSIRASNQTEKDSNSGLLDHFCLSLTHRIFSNRVLVHLESVVCKVPYLHLISHPTWNSRT 462
Query: 358 SSWTVFLKVPQSIL---HAESNSRTAE-TAKSHFRTNVVVNDDCIHVEGEGTPNVVGLFK 413
SSWTVF+ VP SI+ +E+ S + K+ FRT VVV DDCI VE E TPNVVGL K
Sbjct: 463 SSWTVFMTVPPSIIPQGRSETQSPDGKRNLKTQFRTKVVVKDDCISVEAECTPNVVGLLK 522
Query: 414 GRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQG 473
S ++ S+NKY+CD+ADLPV+ILQQVASQ++ WL EEA VG KA+R+FLSLS E+ +G
Sbjct: 523 SSSCNLFSINKYECDVADLPVMILQQVASQIVCWLLEEARTVGTKASREFLSLSLEIVEG 582
Query: 474 ETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDVLYST 533
E VSLVAHV+PED +GCISWWLVME+G ER + S+ +K LGHLSLDVLYS
Sbjct: 583 ERVSLVAHVNPEDAKGCISWWLVMENGCTEER-------EGVSESRKLLGHLSLDVLYSV 635
Query: 534 LMDLVSLCGGG 544
LMDL++LCG G
Sbjct: 636 LMDLINLCGTG 646
>gi|297812205|ref|XP_002873986.1| hypothetical protein ARALYDRAFT_351112 [Arabidopsis lyrata subsp.
lyrata]
gi|297319823|gb|EFH50245.1| hypothetical protein ARALYDRAFT_351112 [Arabidopsis lyrata subsp.
lyrata]
Length = 652
Score = 622 bits (1603), Expect = e-175, Method: Compositional matrix adjust.
Identities = 321/552 (58%), Positives = 404/552 (73%), Gaps = 23/552 (4%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
MTRPK LPNE+LSDL+VS ATKLQ YR+LG YFKQSAK+LEQ+I +EARFYGALIRLQ+N
Sbjct: 110 MTRPKPLPNEILSDLAVSTATKLQGYRNLGNYFKQSAKALEQKINREARFYGALIRLQRN 169
Query: 61 WKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNS 120
WKVKRQR+ A + NEGFTIDL D+SL+D RPS+LSTIR+DHDSAGMLAIN+P +S
Sbjct: 170 WKVKRQRMLASNASNEGFTIDLSDSSLHDPTSGFRPSTLSTIRVDHDSAGMLAINVPQDS 229
Query: 121 CRSFRFGFLGVQSGDSSKQCSKVKNSCSPR--PSKEAKESVNDDECVREKHSLLREVHQA 178
S RFGF+G+ D++ + + +S P K+S +DDE V+E HSLLREVH++
Sbjct: 230 WYSLRFGFVGLNPIDNTNESDEHLDSTMGHDIPGTSEKQSASDDEYVKETHSLLREVHKS 289
Query: 179 IFYEQV-FDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWV 237
IF EQV FD++NREAF + +G N++GIREN++++ IG G S+F+SL PS + + S+
Sbjct: 290 IFAEQVLFDMLNREAFNEGVGFNISGIRENFMEMSIGQGASLFVSLHPSGK-NASI---- 344
Query: 238 NQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPI 297
+ ES L ++S ++ AE D K G+PN +YEIYLQQ+FHE+ +G+AK++P
Sbjct: 345 -KKSESATLLIESSGRIEPAE--GDYRLKKLGFPNRASYEIYLQQIFHEHAFGKAKDQPK 401
Query: 298 STGTRVSGPPTKD-GSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHSR 356
S R S KD SGLL HFCLSL HRIFSN+V LE+ VC VPYLHL+SHPTW+SR
Sbjct: 402 SKSIRASNQTRKDSNSGLLDHFCLSLTHRIFSNRVLEHLESVVCKVPYLHLISHPTWNSR 461
Query: 357 TSSWTVFLKVPQSILHAESNSRTAETAKSH----FRTNVVVNDDCIHVEGEGTPNVVGLF 412
TSSWTVF+ VP SI+ S+ + K + FRT VVV D+CI VE E TPNVVGL
Sbjct: 462 TSSWTVFMTVPPSIIPQGSSETQSPDGKRNLKMQFRTKVVVKDECISVEAECTPNVVGLL 521
Query: 413 KGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQ 472
K S ++ +MNKY+C +ADLPVIILQQVASQ++ WL EEA VG KA+RDFLSLS E+ +
Sbjct: 522 KSSSCNLFAMNKYECGVADLPVIILQQVASQIVCWLLEEARTVGTKASRDFLSLSLEIVE 581
Query: 473 GETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDVLYS 532
GE VSLVA V+PED +GCISWWLVME+G ER + S+ +K LGHLSLDVLYS
Sbjct: 582 GERVSLVAQVNPEDAKGCISWWLVMENGSTEER-------EGVSESRKLLGHLSLDVLYS 634
Query: 533 TLMDLVSLCGGG 544
LMDL++LCG G
Sbjct: 635 VLMDLINLCGTG 646
>gi|118481027|gb|ABK92467.1| unknown [Populus trichocarpa]
Length = 366
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 253/366 (69%), Positives = 301/366 (82%), Gaps = 6/366 (1%)
Query: 187 IVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVNQNVESGIL 246
+VNR A QS G+NVTGI+ENYLQL IG GISIF+S++PS+QGD ++DS +N+ES ++
Sbjct: 1 MVNRGAVNQSSGLNVTGIQENYLQLCIGPGISIFISIVPSDQGDQAIDSEGPENLESAVV 60
Query: 247 PLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPISTGTRVSGP 306
PLDS DGVKLAEEK + L K +PN +TYEIYL+Q+FHEY++ AK +P TGTR+ G
Sbjct: 61 PLDSFDGVKLAEEKHNSLTKKPRFPNCITYEIYLKQIFHEYVFVEAKGRPSFTGTRMPGQ 120
Query: 307 PTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHSRTSSWTVFLKV 366
P DGSGLL HFCLSL+HRI SNKV +ELEN VC VPYLHL+SHPTWHSR+S+WT+F+K+
Sbjct: 121 PANDGSGLLSHFCLSLSHRIISNKVLMELENVVCRVPYLHLISHPTWHSRSSAWTIFMKI 180
Query: 367 PQSILHAESNSRTAE------TAKSHFRTNVVVNDDCIHVEGEGTPNVVGLFKGRSEDMS 420
P SILHA S +RT + KS F T VVV+DDCI++E EG PNVVGLFK S+D
Sbjct: 181 PPSILHASSQTRTPDIQNMKNVVKSEFWTKVVVHDDCINIEAEGAPNVVGLFKDSSDDKC 240
Query: 421 SMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFELDQGETVSLVA 480
S NKYDC+L DLPVIILQQVASQVIRWLHEEAL VGIKANRDFL LSFEL+QGE ++LVA
Sbjct: 241 STNKYDCNLDDLPVIILQQVASQVIRWLHEEALAVGIKANRDFLCLSFELEQGEILNLVA 300
Query: 481 HVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDVLYSTLMDLVSL 540
HVDPED +GCISWWL MEDGFA E+KL ++I+D AS+Y+KFLG+L LDVLYSTLMDLVSL
Sbjct: 301 HVDPEDTQGCISWWLTMEDGFAEEKKLHMNIADGASEYRKFLGYLPLDVLYSTLMDLVSL 360
Query: 541 CGGGSH 546
CGGGSH
Sbjct: 361 CGGGSH 366
>gi|222617546|gb|EEE53678.1| hypothetical protein OsJ_37013 [Oryza sativa Japonica Group]
Length = 655
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/560 (50%), Positives = 370/560 (66%), Gaps = 27/560 (4%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
M +PK+LP E L D +VSAATKLQ RHL YFKQSAK++EQQ KE+RFYG+LIRLQQN
Sbjct: 108 MLKPKSLPTETLVDTAVSAATKLQRVRHLSRYFKQSAKTMEQQFQKESRFYGSLIRLQQN 167
Query: 61 WKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNS 120
WKVKRQR G+EGF DL D S D+A + R SSL I ID DS+G L++ +P S
Sbjct: 168 WKVKRQRFGGSGPGSEGFMFDLIDTSQLDTAAMPRLSSLPLIPIDQDSSGTLSVQVPQKS 227
Query: 121 CRSFRFGFLGVQSGDSSKQCSKVKNSCSPRPSKEAKESVNDD--ECVREKHSLLREVHQA 178
CR F G + K+K+ S S + E+ NDD + ++ HS+LR +H++
Sbjct: 228 CRFLSLNFRGDSANGVENYGHKLKDGIS---SITSSETDNDDVNKSIKHAHSILRNIHKS 284
Query: 179 IFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLS--VDSW 236
IF EQVFD+V RE F QS G+NVTG+RE++LQL IG S+ LSL S G S VD
Sbjct: 285 IFEEQVFDMVIRETFVQSQGINVTGMREDFLQLAIGQECSLCLSLAHSGDGSDSEMVDHE 344
Query: 237 VNQNVE-SGILPLDSHDGVKLAEEKDDILRKS-GGYPNPLTYEIYLQQVFHEYLYGRAKN 294
+ N E + L L + +G K D LRK G+PNP + EIYL Q+FHE + + +
Sbjct: 345 DHANSEDASNLVLVTMNG------KLDPLRKDVTGFPNPRSLEIYLLQLFHENILRKVRE 398
Query: 295 KPISTGTRVSGPP--TKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPT 352
K ++ G R P D GLLGHFCL++AHRIFSNKV VELE+ V VPYLHL S PT
Sbjct: 399 KSLNIG-RYQSPAQVAGDDYGLLGHFCLTVAHRIFSNKVLVELESVVSRVPYLHLRSLPT 457
Query: 353 WHSRTSSWTVFLKVPQSILHAESNSRTAET------AKSHFRTNVVVNDDCIHVEGEGTP 406
WHSRTSSW++ LKVPQ IL A+ ++ ++ ++S F T V+V D I + GEG+P
Sbjct: 458 WHSRTSSWSLCLKVPQPILAADRIAKPSDNHELKYKSRSQFNTKVIVKDSQISLMGEGSP 517
Query: 407 NVVGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSL 466
++ G G+ D +N Y+CDL DLP ++LQQVASQVI WLHEEAL++G+ RDFL L
Sbjct: 518 SIAGSLTGKPSDGYLVNSYNCDLEDLPTMLLQQVASQVIHWLHEEALVLGMNVTRDFLCL 577
Query: 467 SFELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLS 526
F+L+QGET+ LVA+VDP+D GCISW+L + D + K+S D + + ++FLG++S
Sbjct: 578 YFDLEQGETLGLVANVDPDDTCGCISWYLTI-DHPTEDGKMSADSQE--FEKRRFLGYVS 634
Query: 527 LDVLYSTLMDLVSLCGGGSH 546
L+VLYSTLMDL++LC G+H
Sbjct: 635 LEVLYSTLMDLINLCNAGAH 654
>gi|115489788|ref|NP_001067381.1| Os12g0638600 [Oryza sativa Japonica Group]
gi|77556810|gb|ABA99606.1| expressed protein [Oryza sativa Japonica Group]
gi|113649888|dbj|BAF30400.1| Os12g0638600 [Oryza sativa Japonica Group]
gi|215694565|dbj|BAG89558.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187319|gb|EEC69746.1| hypothetical protein OsI_39278 [Oryza sativa Indica Group]
Length = 655
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 282/560 (50%), Positives = 370/560 (66%), Gaps = 27/560 (4%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
M +PK+LP E L D +VSAATKLQ RHL YFKQSAK++EQQ KE+RFYG+LIRLQQN
Sbjct: 108 MLKPKSLPTETLVDTAVSAATKLQRVRHLSRYFKQSAKTMEQQFQKESRFYGSLIRLQQN 167
Query: 61 WKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNS 120
WKVKRQR G+EGF DL D S D+A + R SSL I ID DS+G L++ +P S
Sbjct: 168 WKVKRQRFGGSGPGSEGFMFDLIDTSQLDTAAMPRLSSLPLIPIDQDSSGTLSVQVPQKS 227
Query: 121 CRSFRFGFLGVQSGDSSKQCSKVKNSCSPRPSKEAKESVNDD--ECVREKHSLLREVHQA 178
CR F G + K+K+ S S + E+ NDD + ++ HS+LR +H++
Sbjct: 228 CRFLSLNFRGDSANGVENYGHKLKDGIS---SITSSETDNDDVNKSIKHAHSILRNIHKS 284
Query: 179 IFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLS--VDSW 236
IF EQVFD+V RE F QS G+NVTG+RE++LQL IG S+ LSL S G S VD
Sbjct: 285 IFEEQVFDMVIRETFVQSQGINVTGMREDFLQLAIGQECSLCLSLAHSGDGSDSEMVDHE 344
Query: 237 VNQNVE-SGILPLDSHDGVKLAEEKDDILRKS-GGYPNPLTYEIYLQQVFHEYLYGRAKN 294
+ N E + L L + +G K D LRK G+PNP + EIYL Q+FHE + + +
Sbjct: 345 DHANSEDASNLVLVTMNG------KLDPLRKDVTGFPNPRSLEIYLLQLFHENILRKVRE 398
Query: 295 KPISTGTRVSGPP--TKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPT 352
K ++ G R P D GLLGHFCL++AHRIFSNKV VELE+ V VPYLHL S PT
Sbjct: 399 KSLNIG-RYQSPAQVAGDDYGLLGHFCLTVAHRIFSNKVLVELESVVSRVPYLHLRSLPT 457
Query: 353 WHSRTSSWTVFLKVPQSILHAESNSRTAET------AKSHFRTNVVVNDDCIHVEGEGTP 406
WHSRTSSW++ LKVPQ IL A+ ++ ++ ++S F T V+V D I + GEG+P
Sbjct: 458 WHSRTSSWSLCLKVPQPILAADRIAKPSDNHELKYKSRSQFNTKVIVKDSQISLMGEGSP 517
Query: 407 NVVGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSL 466
++ G G+ D +N Y+CDL DLP ++LQQVASQVI WLHEEAL++G+ RDFL L
Sbjct: 518 SIAGSLTGKPSDGYLVNSYNCDLEDLPTMLLQQVASQVIHWLHEEALVLGMNVTRDFLCL 577
Query: 467 SFELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLS 526
F+L+QGET+ LVA+VDP+D GCISW+L + D + K+S D + + ++FLG++S
Sbjct: 578 YFDLEQGETLGLVANVDPDDTCGCISWYLTI-DHPTEDGKMSADSQE--FEKRRFLGYVS 634
Query: 527 LDVLYSTLMDLVSLCGGGSH 546
L+VLYSTLMDL++LC G+H
Sbjct: 635 LEVLYSTLMDLINLCNAGAH 654
>gi|357135663|ref|XP_003569428.1| PREDICTED: uncharacterized protein LOC100822959 [Brachypodium
distachyon]
Length = 656
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 268/559 (47%), Positives = 352/559 (62%), Gaps = 25/559 (4%)
Query: 2 TRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNW 61
++PK+LPNEVL D++VSAATKLQ RHLG YFKQSAK++EQQ KEARFYG+LIRLQQNW
Sbjct: 108 SKPKSLPNEVLDDMAVSAATKLQRLRHLGRYFKQSAKTMEQQFQKEARFYGSLIRLQQNW 167
Query: 62 KVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSC 121
KVKR R A G++ F D+ D S D+A + R SS+S + ID DS+G L++ +P SC
Sbjct: 168 KVKRHRFGATGPGSDSFMFDVVDTSQLDTAAMPRMSSMSLVPIDQDSSGTLSVQVPQKSC 227
Query: 122 RSFRFGFLGVQSGDSSKQCSKVKNSCSPRPSKEAKESVNDD--ECVREKHSLLREVHQAI 179
R G + + K+K S + E NDD + V+ HS+LR +H++I
Sbjct: 228 RFLSLQLRGDNASSAESYACKMKGISSTTSAAENDALENDDVNKSVKHAHSILRNIHKSI 287
Query: 180 FYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVNQ 239
F EQVFD+V RE F S G+NVTG+RE++LQL IG + LSL L DS
Sbjct: 288 FEEQVFDMVIRETFVPSQGINVTGMREDFLQLAIGQENLLCLSL---EHSGLDTDS---- 340
Query: 240 NVESGILPLDSHDGVKLA----EEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNK 295
+E P DS D L K + + NP + EIYL +FHE + + + K
Sbjct: 341 EMEGLEEPTDSEDASNLVLATINGKQEPSKMDASGLNPKSLEIYLLHMFHENILRKVREK 400
Query: 296 PISTGTRVSGPPTK--DGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTW 353
R P D LLGHFC+++AHRIFSNKVH+ELE+ V VPYLHL S PTW
Sbjct: 401 -YRNIVRYPSPAQAAGDDCNLLGHFCMTVAHRIFSNKVHLELESVVSRVPYLHLQSLPTW 459
Query: 354 HSRTSSWTVFLKVPQSILHAE------SNSRTAETAKSHFRTNVVVNDDCIHVEGEGTPN 407
HSRTSSW++ L+VPQ IL A+ N ++S F T V++ D I + GEG+P+
Sbjct: 460 HSRTSSWSLCLRVPQPILAADRVTKPLDNDEPKYKSRSQFNTKVILKDGQISLMGEGSPS 519
Query: 408 VVGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLS 467
+ G + D +N Y+CDL DLP ++LQQVASQVI WLHEEAL++G+ RDFL L
Sbjct: 520 IAGSLTRKPSDGYLINSYNCDLEDLPTMLLQQVASQVINWLHEEALVLGMNVTRDFLCLY 579
Query: 468 FELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSL 527
F+LDQG+T+ LVAHVDP+D GCISW+L + D A + K+S D + + ++FLG+LSL
Sbjct: 580 FDLDQGDTLGLVAHVDPDDAYGCISWYLTI-DHSAKDGKMSTD--NPEFEKRRFLGYLSL 636
Query: 528 DVLYSTLMDLVSLCGGGSH 546
+VLYSTLMDL++LC G H
Sbjct: 637 EVLYSTLMDLINLCSTGVH 655
>gi|226494373|ref|NP_001145828.1| uncharacterized protein LOC100279335 [Zea mays]
gi|194704804|gb|ACF86486.1| unknown [Zea mays]
gi|219884585|gb|ACL52667.1| unknown [Zea mays]
gi|413947117|gb|AFW79766.1| hypothetical protein ZEAMMB73_523859 [Zea mays]
Length = 661
Score = 489 bits (1260), Expect = e-135, Method: Compositional matrix adjust.
Identities = 267/555 (48%), Positives = 358/555 (64%), Gaps = 27/555 (4%)
Query: 2 TRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNW 61
T+PK+ PNE+L D++VSAATKLQ RHL YFKQSAK++EQQ KE RFYG+LIRLQQNW
Sbjct: 110 TKPKSQPNEILVDMAVSAATKLQRLRHLSWYFKQSAKTMEQQFQKETRFYGSLIRLQQNW 169
Query: 62 KVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSC 121
KVKRQR A + G+EGF DL D+S D+ V R S LS I ID DS+G L++ +P S
Sbjct: 170 KVKRQR-AVGSPGSEGFMFDLVDSSQLDTTTVLRLSPLSLIPIDQDSSGTLSVQIPQKSL 228
Query: 122 RSFRFGFLGVQSGDSSKQCSKVKNSCSPRPSKEAKESV--NDD--ECVREKHSLLREVHQ 177
RS F G ++ K K + EA++ V +DD + +R HS+LR++H+
Sbjct: 229 RSLSLKFHGDIVNNAESSAIKKKEGTLTNTTAEAEKDVLADDDVNKSIRYAHSILRDIHK 288
Query: 178 AIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPS----NQGDLSV 233
+IF EQVFD+V RE F QS G+NVTG+ E++LQL IG S+ LSL S N G +
Sbjct: 289 SIFEEQVFDMVIRETFNQSQGINVTGMCEDFLQLAIGQECSLCLSLELSGQNNNAGTVGQ 348
Query: 234 DSWVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYG-RA 292
++ N + V K+ + G+PNP + EIYL +FHE L R
Sbjct: 349 QDHMDTNYPGNL-------AVATVNGKESSNKDVRGFPNPKSLEIYLLHMFHEILRKLRE 401
Query: 293 KNKPISTGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPT 352
K++ + + S D GLL HFC+++AHRIFSNKVH+ELE+ V VPYLHL S PT
Sbjct: 402 KSRHV-VRYQSSAQAAPDDCGLLSHFCMTVAHRIFSNKVHLELESVVSRVPYLHLRSLPT 460
Query: 353 WHSRTSSWTVFLKVPQSILHAESNSRTAE------TAKSHFRTNVVVNDDCIHVEGEGTP 406
WHSRTSSW++ LKVPQ IL ++ ++ ++S F T V++ D I + GEG+P
Sbjct: 461 WHSRTSSWSLCLKVPQPILATGRVTKPSDYHELKYKSRSQFSTKVILKDGQISLMGEGSP 520
Query: 407 NVVGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSL 466
++VG G+ D +N Y+CDL DLP+++LQQVASQVI WLH+EA+++G+ RDFL L
Sbjct: 521 SIVGSLTGKPSDSRLINSYNCDLEDLPMMLLQQVASQVIHWLHDEAMILGMNVTRDFLCL 580
Query: 467 SFELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLS 526
F+L QGET+ L+AHVDP+D GCISW+L +E E K+S S+ ++FLG+LS
Sbjct: 581 YFDLGQGETLGLLAHVDPDDTYGCISWYLTVEHPM-EEGKMS--AGSPESEKRRFLGYLS 637
Query: 527 LDVLYSTLMDLVSLC 541
L+VLYSTLMDL+ LC
Sbjct: 638 LEVLYSTLMDLIKLC 652
>gi|242056755|ref|XP_002457523.1| hypothetical protein SORBIDRAFT_03g008700 [Sorghum bicolor]
gi|241929498|gb|EES02643.1| hypothetical protein SORBIDRAFT_03g008700 [Sorghum bicolor]
Length = 659
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 261/554 (47%), Positives = 358/554 (64%), Gaps = 18/554 (3%)
Query: 2 TRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNW 61
T+PK+ PNE+L D++VSAATKLQ RHL YFKQSA+++EQQ KE RFY +LIRLQQNW
Sbjct: 110 TKPKSQPNEILVDMAVSAATKLQRLRHLSRYFKQSARTMEQQFQKETRFYSSLIRLQQNW 169
Query: 62 KVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSC 121
KVKRQR A + G+EGF DL D+S D+ + R S LS I ID DS+G L++ +P S
Sbjct: 170 KVKRQR-AVGSPGSEGFMFDLVDSSQLDTTTMPRLSPLSLIPIDQDSSGTLSVQIPQKSF 228
Query: 122 RSFRFGFLGVQSGDSSKQCSKVKNSCSPRPSKEAKESV--NDD--ECVREKHSLLREVHQ 177
RS F G + ++ + K K + EA++ V N D + ++ HS+LR++H+
Sbjct: 229 RSLTLQFRGDIANNAERSAIKKKEGTLTNTTTEAEKDVLENGDVNKSIKHAHSILRDIHK 288
Query: 178 AIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWV 237
+IF EQVFD+V RE F QS G+NVTG+ E++LQL IG S+ LSL S Q +S
Sbjct: 289 SIFEEQVFDMVIRETFVQSQGINVTGMCEDFLQLAIGQECSLCLSLELSRQNSISETVGQ 348
Query: 238 NQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKPI 297
++++ + V K+ + G+PNP EIYL +FHE + + + K
Sbjct: 349 EDHMDTD---YTENLAVATVNGKESSNKDVRGFPNPKCLEIYLLHMFHENILRKLREKSR 405
Query: 298 S-TGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWHSR 356
+ S D GLL HFC++++HRIFSNKVH+ELE+ V VPYLHL S PTWHSR
Sbjct: 406 HMVRYQSSAQAAPDDCGLLSHFCMTVSHRIFSNKVHLELESVVSRVPYLHLCSLPTWHSR 465
Query: 357 TSSWTVFLKVPQSILHAESNSRTAE------TAKSHFRTNVVVNDDCIHVEGEGTPNVVG 410
TSSW++ LKVPQ IL + + ++ ++S F T V++ D I + GEG+P++ G
Sbjct: 466 TSSWSLCLKVPQPILATDRVRKPSDHHKLKYKSRSQFSTKVILKDGQISLMGEGSPSIAG 525
Query: 411 LFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFEL 470
G+ D +N Y+CDL DLP+++LQQVASQVI WLH+EA+++G+ RDFL L F+L
Sbjct: 526 SLTGKPSDGRLINSYNCDLEDLPMMLLQQVASQVIHWLHDEAMVLGMNVTRDFLCLYFDL 585
Query: 471 DQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDVL 530
DQGET+ LVAHVDP+D GCISW+L + D E K+S D + + ++FLG+LSL+VL
Sbjct: 586 DQGETLGLVAHVDPDDTYGCISWYLTV-DHPMEEGKMSADSPE--LEKRRFLGYLSLEVL 642
Query: 531 YSTLMDLVSLCGGG 544
YSTLMDL+ LC G
Sbjct: 643 YSTLMDLIKLCSTG 656
>gi|223945737|gb|ACN26952.1| unknown [Zea mays]
gi|413926580|gb|AFW66512.1| hypothetical protein ZEAMMB73_010825 [Zea mays]
gi|413926581|gb|AFW66513.1| hypothetical protein ZEAMMB73_010825 [Zea mays]
Length = 660
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 260/565 (46%), Positives = 350/565 (61%), Gaps = 39/565 (6%)
Query: 2 TRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNW 61
T+PK+ PNE+L D++V AATKLQC RHL YFKQSA ++EQQ KE RFY +LIRLQQNW
Sbjct: 110 TKPKSQPNEILVDMAVCAATKLQCLRHLSRYFKQSATTMEQQFQKETRFYSSLIRLQQNW 169
Query: 62 KVKRQR-VAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNS 120
KVKRQR V +P G+EGF DL D S D+ + R S LS I ID DS+G L++ +P
Sbjct: 170 KVKRQRSVGSP--GSEGFMFDLVDTSQLDTTTMPRLSPLSLIPIDQDSSGTLSVQIPQKC 227
Query: 121 CRSFRFGFLGVQSGDSSKQCSKVKNSCSPRPSKEAKESV--NDD--ECVREKHSLLREVH 176
S F G + ++ K K + A+ V NDD + HS+LR++H
Sbjct: 228 FHSLSLRFHGDIANNAESSAVKRKEGTLTNTTTGAENDVLENDDVNKSTEHAHSILRDIH 287
Query: 177 QAIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVDSW 236
++IF EQVFD+V +E F QS G+NVTG+ E++LQL IG S+ LS DLS
Sbjct: 288 KSIFEEQVFDMVIQETFIQSQGINVTGMCEDFLQLAIGQECSLCLS------HDLS---- 337
Query: 237 VNQNVESGILPLDSHD--------GVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYL 288
QN SG + + H V K+ + G+PNP + EIYL VFHE +
Sbjct: 338 -GQNNNSGTVGQEDHMDIDHTGNLAVATVNGKESSNKDVRGFPNPKSLEIYLLHVFHEGI 396
Query: 289 YGRAKNKP---ISTGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYL 345
+ + K + + G P D GLL HFC++++HRIFS+KVH+ELE+ V VPYL
Sbjct: 397 LRKLREKSRHVVRYQSSAQGTP--DECGLLSHFCMTVSHRIFSSKVHLELESVVSRVPYL 454
Query: 346 HLVSHPTWHSRTSSWTVFLKVPQSILHAESNSRTAE------TAKSHFRTNVVVNDDCIH 399
HL S PTWHSRTSSW++ LKVPQ IL + R ++ ++S F T V++ D I
Sbjct: 455 HLCSLPTWHSRTSSWSLCLKVPQPILATDRVRRPSDYSELKCKSRSQFGTKVILKDGQIS 514
Query: 400 VEGEGTPNVVGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKA 459
+ GEG+P++ G G+ D +N Y+CDL DLP+++LQQVASQVI WLH+EA+++G+ A
Sbjct: 515 LMGEGSPSIAGSLAGKPSDGRLVNSYNCDLEDLPMMLLQQVASQVIHWLHDEAVVLGMNA 574
Query: 460 NRDFLSLSFELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYK 519
DFL L +LDQGET+ LVAHVDP+D GC+SW+L ++ E K+S + +
Sbjct: 575 TIDFLCLYLDLDQGETLGLVAHVDPDDTYGCVSWYLTLDHHPTEEGKMS--AGSPELEER 632
Query: 520 KFLGHLSLDVLYSTLMDLVSLCGGG 544
+FLG+LS ++LYSTLMDLV LC G
Sbjct: 633 RFLGYLSPELLYSTLMDLVKLCSTG 657
>gi|326527475|dbj|BAK08012.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 590
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/560 (45%), Positives = 354/560 (63%), Gaps = 25/560 (4%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
++PK ++VL +++VSAATKLQ RHLG YFKQSAK++EQQ KEARFYG+LIRLQQN
Sbjct: 35 FSKPKKRLDKVLVNMAVSAATKLQRLRHLGRYFKQSAKTMEQQFQKEARFYGSLIRLQQN 94
Query: 61 WKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNS 120
WKV RQ AP G+ F D+ D S D+A + R SSLS + ID DS+G L++++P S
Sbjct: 95 WKVNRQCGNAP--GSNSFMFDVVDTSHLDTAVMPRSSSLSLVPIDQDSSGTLSVHVPQKS 152
Query: 121 CRSFRFGFLG-VQSGDSSKQCSKVKNSCSPRPSKEAKESVNDD--ECVREKHSLLREVHQ 177
CR F G SG S C+ S + + E NDD + V++ HS+LR +H+
Sbjct: 153 CRFLSLQFCGDSTSGTESYACNTKGVSSTTSSAVEDDVPENDDVNKSVKQAHSILRNIHR 212
Query: 178 AIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQ-GDLSVDSW 236
+IF EQVFD+V E F Q+ GVNVTG+ E++LQ+ I I + LSL+ S Q D +
Sbjct: 213 SIFEEQVFDMVTCETFVQTKGVNVTGMWEDFLQIAIDQEILLCLSLVNSGQDSDSEMAGH 272
Query: 237 VNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKP 296
N L L + +G +++ + + G+ NP + EIYL +FH+ + + + K
Sbjct: 273 EEHNNSEANLVLATTNG-----KQEPLKSDASGFLNPKSLEIYLLHMFHDNILRKVREK- 326
Query: 297 ISTGTRVSGP-----PTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHP 351
R P P D GLLGHFC+++AH+IFSNKV +ELE+ + VPYLHL S P
Sbjct: 327 YRNIVRYQSPGQTAEPAGDECGLLGHFCMTVAHKIFSNKVQLELESVLSRVPYLHLQSLP 386
Query: 352 TWHSRTSSWTVFLKVPQSILHAESNSRTAE----TAKSHFRTNVVVNDDCIHVEGEGTPN 407
TWHSRTSSW++ L++P IL A+ S E ++++ F T +V+ D I + GEG+P+
Sbjct: 387 TWHSRTSSWSLCLRIPPPILAADKPSDNGEPKYKSSRTQFNTKIVLKDVQISLFGEGSPS 446
Query: 408 VVGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLS 467
+ G + D +N Y+CDL DLP ++LQQVASQVI WLHEE ++G+ RDFL L
Sbjct: 447 IAGSLTRKPSDGYLINNYNCDLEDLPTMVLQQVASQVINWLHEETQVLGMSVTRDFLGLY 506
Query: 468 FELDQGETV-SLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKK--FLGH 524
F+LD G+T+ LVAHVDP+D GC+SW+L + D A E ++ + ++ +K FLG+
Sbjct: 507 FDLDHGDTMLGLVAHVDPDDAYGCVSWYLTV-DHPAEEDGMTPAANGPWAEEEKCRFLGY 565
Query: 525 LSLDVLYSTLMDLVSLCGGG 544
LSL+VLYSTLMDL++LCG G
Sbjct: 566 LSLEVLYSTLMDLINLCGTG 585
>gi|326533946|dbj|BAJ93746.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 581
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/560 (45%), Positives = 354/560 (63%), Gaps = 25/560 (4%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
++PK ++VL +++VSAATKLQ RHLG YFKQSAK++EQQ KEARFYG+LIRLQQN
Sbjct: 26 FSKPKKRLDKVLVNMAVSAATKLQRLRHLGRYFKQSAKTMEQQFQKEARFYGSLIRLQQN 85
Query: 61 WKVKRQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNS 120
WKV RQ AP G+ F D+ D S D+A + R SSLS + ID DS+G L++++P S
Sbjct: 86 WKVNRQCGNAP--GSNSFMFDVVDTSHLDTAVMPRSSSLSLVPIDQDSSGTLSVHVPQKS 143
Query: 121 CRSFRFGFLG-VQSGDSSKQCSKVKNSCSPRPSKEAKESVNDD--ECVREKHSLLREVHQ 177
CR F G SG S C+ S + + E NDD + V++ HS+LR +H+
Sbjct: 144 CRFLSLQFCGDSTSGTESYACNTKGVSSTTSSAVEDDVPENDDVNKSVKQAHSILRNIHR 203
Query: 178 AIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQ-GDLSVDSW 236
+IF EQVFD+V E F Q+ GVNVTG+ E++LQ+ I I + LSL+ S Q D +
Sbjct: 204 SIFEEQVFDMVTCETFVQTKGVNVTGMWEDFLQIAIDQEILLCLSLVNSGQDSDSEMAGH 263
Query: 237 VNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKNKP 296
N L L + +G +++ + + G+ NP + EIYL +FH+ + + + K
Sbjct: 264 EEHNNSEANLVLATTNG-----KQEPLKSDASGFLNPKSLEIYLLHMFHDNILRKVREK- 317
Query: 297 ISTGTRVSGP-----PTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHP 351
R P P D GLLGHFC+++AH+IFSNKV +ELE+ + VPYLHL S P
Sbjct: 318 YRNIVRYQSPGQTAEPAGDECGLLGHFCMTVAHKIFSNKVQLELESVLSRVPYLHLQSLP 377
Query: 352 TWHSRTSSWTVFLKVPQSILHAESNSRTAE----TAKSHFRTNVVVNDDCIHVEGEGTPN 407
TWHSRTSSW++ L++P IL A+ S E ++++ F T +V+ D I + GEG+P+
Sbjct: 378 TWHSRTSSWSLCLRIPPPILAADKPSDNGEPKYKSSRTQFNTKIVLKDVQISLFGEGSPS 437
Query: 408 VVGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLS 467
+ G + D +N Y+CDL DLP ++LQQVASQVI WLHEE ++G+ RDFL L
Sbjct: 438 IAGSLTRKPSDGYLINNYNCDLEDLPTMVLQQVASQVINWLHEETQVLGMSVTRDFLGLY 497
Query: 468 FELDQGETV-SLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKK--FLGH 524
F+LD G+T+ LVAHVDP+D GC+SW+L + D A E ++ + ++ +K FLG+
Sbjct: 498 FDLDHGDTMLGLVAHVDPDDAYGCVSWYLTV-DHPAEEDGMTPAANGPWAEEEKCRFLGY 556
Query: 525 LSLDVLYSTLMDLVSLCGGG 544
LSL+VLYSTLMDL++LCG G
Sbjct: 557 LSLEVLYSTLMDLINLCGTG 576
>gi|326518212|dbj|BAK07358.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 474
Score = 325 bits (833), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 172/397 (43%), Positives = 255/397 (64%), Gaps = 20/397 (5%)
Query: 162 DECVREKHSLLREVHQAIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFL 221
++ V++ HS+LR +H++IF EQV D+V RE F Q+ GVNVTG+RE++LQL IG + L
Sbjct: 81 NKSVKQAHSILRNIHKSIFEEQVLDMVIRETFVQTQGVNVTGMREDFLQLAIGEESLLCL 140
Query: 222 SLIPSNQ-GDLSVDSWVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYL 280
SL+ S Q D + N L L + +G +++ + + G+ NP + EIYL
Sbjct: 141 SLVNSGQDSDSEIAGHEEHNNSEANLVLATTNG-----KQEPLKMDTSGFLNPKSLEIYL 195
Query: 281 QQVFHEYLYGRAKNKPISTGTRVSGPPTKDGSG----LLGHFCLSLAHRIFSNKVHVELE 336
+FHE + + + K + S T + +G LL HFC+++AH+ FS KV +ELE
Sbjct: 196 LHLFHENILRKVREKYRNIVRYQSPAQTAESAGEDCGLLSHFCMTVAHKTFSKKVQLELE 255
Query: 337 NAVCGVPYLHLVSHPTWHSRTSSWTVFLKVPQSILHAESNSRTAE-------TAKSHFRT 389
+ V VPYL L S PTWHSRTSSW++ L+VPQ IL A+ ++ ++ ++++ F T
Sbjct: 256 SVVSRVPYLQLRSLPTWHSRTSSWSLCLRVPQPILAADRPTKPSDNGEPKYKSSRTQFNT 315
Query: 390 NVVVNDDCIHVEGEGTPNVVGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLH 449
+V+ D I + GEG+P++ G + D +N Y+CDL DLP ++LQQVASQ+I WLH
Sbjct: 316 KIVLKDGQISLLGEGSPSIAGSLTRKPSDGYLINSYNCDLEDLPTMVLQQVASQIINWLH 375
Query: 450 EEALMVGIKANRDFLSLSFELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSI 509
EEAL++G+ RDFL L F+L+ G+T+ LVAHVDP+D GCISW+L ++ AE
Sbjct: 376 EEALVLGMSVTRDFLCLYFDLEHGDTLGLVAHVDPDDEYGCISWYLTVD--HPAEEDGKA 433
Query: 510 DISDDA-SDYKKFLGHLSLDVLYSTLMDLVSLCGGGS 545
DD ++ ++FLG+LSL+VLYSTL+DL++LCG G+
Sbjct: 434 PAGDDPWAEKRRFLGYLSLEVLYSTLLDLINLCGTGA 470
>gi|413947118|gb|AFW79767.1| hypothetical protein ZEAMMB73_523859 [Zea mays]
Length = 300
Score = 267 bits (682), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 135/269 (50%), Positives = 181/269 (67%), Gaps = 9/269 (3%)
Query: 279 YLQQVFHEYLYGRAKNKPISTGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENA 338
YL+ FHE L + + S D GLL HFC+++AHRIFSNKVH+ELE+
Sbjct: 26 YLRSRFHEILRKLREKSRHVVRYQSSAQAAPDDCGLLSHFCMTVAHRIFSNKVHLELESV 85
Query: 339 VCGVPYLHLVSHPTWHSRTSSWTVFLKVPQSILHAESNSRTAE------TAKSHFRTNVV 392
V VPYLHL S PTWHSRTSSW++ LKVPQ IL ++ ++ ++S F T V+
Sbjct: 86 VSRVPYLHLRSLPTWHSRTSSWSLCLKVPQPILATGRVTKPSDYHELKYKSRSQFSTKVI 145
Query: 393 VNDDCIHVEGEGTPNVVGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEA 452
+ D I + GEG+P++VG G+ D +N Y+CDL DLP+++LQQVASQVI WLH+EA
Sbjct: 146 LKDGQISLMGEGSPSIVGSLTGKPSDSRLINSYNCDLEDLPMMLLQQVASQVIHWLHDEA 205
Query: 453 LMVGIKANRDFLSLSFELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDIS 512
+++G+ RDFL L F+L QGET+ L+AHVDP+D GCISW+L +E E K+S
Sbjct: 206 MILGMNVTRDFLCLYFDLGQGETLGLLAHVDPDDTYGCISWYLTVEHPM-EEGKMS--AG 262
Query: 513 DDASDYKKFLGHLSLDVLYSTLMDLVSLC 541
S+ ++FLG+LSL+VLYSTLMDL+ LC
Sbjct: 263 SPESEKRRFLGYLSLEVLYSTLMDLIKLC 291
>gi|255566969|ref|XP_002524467.1| hypothetical protein RCOM_0221540 [Ricinus communis]
gi|223536255|gb|EEF37907.1| hypothetical protein RCOM_0221540 [Ricinus communis]
Length = 407
Score = 251 bits (642), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 121/150 (80%), Positives = 134/150 (89%), Gaps = 1/150 (0%)
Query: 398 IHVEGEGTPNVVGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGI 457
I E EG PNVVGLFKG S+D+ S+NKYDCDLADLPVIILQQVASQVIRWLHEEAL VGI
Sbjct: 258 IFDEQEGAPNVVGLFKGSSDDVCSVNKYDCDLADLPVIILQQVASQVIRWLHEEALSVGI 317
Query: 458 KANRDFLSLSFELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASD 517
KANRDFL LSFEL+QGE +SLVAHVDPED GCISWWLVMEDGFA ERKL +DI+D+AS+
Sbjct: 318 KANRDFLCLSFELEQGEVLSLVAHVDPEDTEGCISWWLVMEDGFAEERKLHMDIADEASE 377
Query: 518 YKKFLGHLSLDVLYSTLMDLVSLC-GGGSH 546
Y+KFLG+L LD+LYS LM+LVSLC GGGSH
Sbjct: 378 YRKFLGYLPLDILYSILMNLVSLCSGGGSH 407
Score = 249 bits (637), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/158 (78%), Positives = 138/158 (87%), Gaps = 2/158 (1%)
Query: 28 HLGIYFKQSAKSLEQQIAKEARFYGALIRLQQNWKVKRQRVAAPASGNEGFTIDLFDNSL 87
HLG YFKQSAK+ EQQIA+EARFYGALIRLQQNWKVKRQR+AA A NEGFTIDLFDNSL
Sbjct: 105 HLGKYFKQSAKAFEQQIAREARFYGALIRLQQNWKVKRQRMAATALSNEGFTIDLFDNSL 164
Query: 88 YDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGVQSGDSSKQCSKVKNSC 147
YDSA + RP SLSTIRIDHDSAGMLAINLPP+SCRS FGFLGV S D+ K+C+K+K+SC
Sbjct: 165 YDSASLFRPPSLSTIRIDHDSAGMLAINLPPSSCRSLHFGFLGVHSNDNIKKCTKIKSSC 224
Query: 148 S-PRPSKEA-KESVNDDECVREKHSLLREVHQAIFYEQ 183
S SKEA KES++D+ECV+E HSLLREVHQAIF EQ
Sbjct: 225 SVEHSSKEAEKESLSDNECVKETHSLLREVHQAIFDEQ 262
>gi|168061092|ref|XP_001782525.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666010|gb|EDQ52677.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 626
Score = 244 bits (623), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 181/564 (32%), Positives = 285/564 (50%), Gaps = 90/564 (15%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
M RPK P E+ SD+++ A++KL +R++G Y K+SA+SLEQQ+ +EA FYGAL+RLQ+N
Sbjct: 107 MERPKLQPQEICSDVALRASSKLHHFRNVGKYLKRSAQSLEQQVEREAVFYGALMRLQRN 166
Query: 61 WKVKRQR-VAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPP- 118
WKVKRQR VAA G+ GF+ID+ + +SAP I ++ +S G+L +LP
Sbjct: 167 WKVKRQRGVAAGPGGSAGFSIDVGTS---ESAPC-------LITLEQNSVGLLTAHLPAA 216
Query: 119 -----------NSCRSFRFGFLGVQSGDSSKQCSKVKNSCSPRPSKEAKESVND--DECV 165
++ F+FG + +SK+ + + P K + V D
Sbjct: 217 LTLSSLHVTLLSTPAPFKFGKDTERLSATSKEGTS-DATVLPEAPKPGERGVGPGVDRGA 275
Query: 166 REKHSLLREVHQAIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIP 225
++LR++ A F QVF+ V R+A S +NVTG+ + LQL +G S+ + L P
Sbjct: 276 TRTQAMLRQIQTANFDAQVFEWVGRQALSLSPYINVTGLSDTCLQLSLGNAASLNVHLTP 335
Query: 226 SNQGDLSVDSWVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFH 285
++ +S + V + P H +L PN + + LQQ +
Sbjct: 336 --MAPIADESQGSDKVLAPRTP--DHQNPRL-------------LPNEGSLSVCLQQAYQ 378
Query: 286 EYLYGRAKNK-PISTGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPY 344
+L+GR N TG G + +GL+ H + HR+ S+K+ LE V GVP
Sbjct: 379 RHLHGRDDNALSKETGKHKDG--YAESAGLVKHVSAIMKHRVASDKIISVLEKQVHGVPE 436
Query: 345 LHLVSHPTWHSRTSSWTVFLKVPQSILHAESNSRTAETAKSHFRTNVVVNDDCIHVEGEG 404
L +SHPTWH++ S+W ++L VP S L ++ +VV+ +D +
Sbjct: 437 LRFISHPTWHAQVSTWDLWLDVPDSAL------------LGRWQASVVLREDML------ 478
Query: 405 TPNVVGLFKGRSEDMSSMNKYDCDLADL-PVIILQ--------QVASQVIRWLHEEALMV 455
+ GL G ++S C L++L P ++ Q Q+A+ ++ WLH EA +
Sbjct: 479 --TIAGLPSGNGNRLTSTA---CTLSELSPFLLFQRLIADVCWQMAAHLVTWLHAEASGM 533
Query: 456 GIKANRDFLSLSFELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDA 515
G++A D LS++FELD E VSLVA P I+W L +LS ++D+
Sbjct: 534 GVEARLDSLSITFELDNFEDVSLVA--SPAVKSHTINWSL----------RLSGSRTEDS 581
Query: 516 SDYKKFLGHLSLDVLYSTLMDLVS 539
+FLG L L+ L + ++DL++
Sbjct: 582 DATSRFLGPLPLETLRAIVIDLMN 605
>gi|302820478|ref|XP_002991906.1| hypothetical protein SELMODRAFT_430185 [Selaginella moellendorffii]
gi|300140292|gb|EFJ07017.1| hypothetical protein SELMODRAFT_430185 [Selaginella moellendorffii]
Length = 738
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 167/547 (30%), Positives = 277/547 (50%), Gaps = 62/547 (11%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
M +PK LPNE +DL++ A+K + Y+ + Y K++AKSLE+Q+ +E+ FYGAL+RLQ+N
Sbjct: 102 MMKPKPLPNEAGADLALRTASKSRSYKEIASYLKRNAKSLERQVERESVFYGALMRLQRN 161
Query: 61 WKVKRQR-VAAPASGNEGFTIDL-----FDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAI 114
WK+KRQR V+A G GF IDL D SL S SR ++ + I+++ D+ G+L++
Sbjct: 162 WKIKRQRGVSAGPGGKAGFLIDLSFPLSVDPSLISS---SRTAAWTLIKVNQDANGLLSV 218
Query: 115 NLPPNSCRSFRFGFLGVQSGDSSKQCSKVKNSCSPRPSKEAKESVNDDECVREKHSLLRE 174
+P + +L S + + SK + PR +++ + DE + LR
Sbjct: 219 QIPAGKTITTLQVYL---SRELEEYTSKQQLEQPPR----RRDNRDPDEGTSSANHRLRN 271
Query: 175 VHQAIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVD 234
+ +IF E +F+ + R+ + S ++ I E+ L +G G I+ F L+ + D + D
Sbjct: 272 IQLSIFDELIFECLCRDVLQPSSATSLHEIGESSLDIGAGPSIASFFRLV---EDDAAKD 328
Query: 235 SWVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKN 294
+ + + V+ LPL + IYLQQ F+ L
Sbjct: 329 ATLKE-VDVKRLPLAG------------------------SLRIYLQQGFYSMLLASIVQ 363
Query: 295 KPISTGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWH 354
+ + G R +G ++ + LL +F + HR +K+ L+ V VP L SHPTW
Sbjct: 364 RS-APGPR-AGTGKEEPANLLKNFSVLARHRSAGDKIVSLLDTLVLQVPQLWFRSHPTWR 421
Query: 355 SRTSSWTVFLKVPQSIL------HAESNSRTAETAKSHFRTNVVVNDDCIHVEGEGTPNV 408
S+W V+ +P++I+ H E N ET+ + F+ +V+ + + +EG
Sbjct: 422 PFVSAWDVYFDIPEAIMNGGQMKHLEWNVLVRETSAT-FQCTLVLRQEILSIEGLDGCMP 480
Query: 409 VGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSF 468
+G ++ + M C +++LP +L Q+A +VI WL EEA+++G + RDFLS+ F
Sbjct: 481 LG---ASGQESTGMKSCVCSVSELPFFLLTQIAGKVIGWLEEEAVLLGPRVKRDFLSIVF 537
Query: 469 ELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLD 528
+ VSLVA P CI+WWL F ++ + A ++FLG L L+
Sbjct: 538 NIQNNGLVSLVAA--PSGY--CINWWLRFY-SFGSD-DTAAASGASAPASERFLGPLPLE 591
Query: 529 VLYSTLM 535
L + L+
Sbjct: 592 TLRAALV 598
>gi|302796709|ref|XP_002980116.1| hypothetical protein SELMODRAFT_419660 [Selaginella moellendorffii]
gi|300152343|gb|EFJ18986.1| hypothetical protein SELMODRAFT_419660 [Selaginella moellendorffii]
Length = 697
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 165/550 (30%), Positives = 279/550 (50%), Gaps = 62/550 (11%)
Query: 1 MTRPKALPNEVLSDLSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN 60
M +PK LPNE +DL++ A+K + Y+ + Y K++AKSLE+Q+ +E+ FYGAL+RLQ+N
Sbjct: 102 MMKPKPLPNEAGADLALRTASKSRSYKEIASYLKRNAKSLERQVERESVFYGALMRLQRN 161
Query: 61 WKVKRQR-VAAPASGNEGFTIDL-----FDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAI 114
WK+KRQR V+A G GF +DL D SL S SR ++ + I+++ D+ G+L++
Sbjct: 162 WKIKRQRGVSAGPGGKAGFLMDLSFPLSVDPSLISS---SRTAAWTLIKVNQDANGLLSV 218
Query: 115 NLPPNSCRSFRFGFLGVQSGDSSKQCSKVKNSCSPRPSKEAKESVNDDECVREKHSLLRE 174
+P + +L S + + SK + PR +++ + DE + LR
Sbjct: 219 QIPAGKTITTLQVYL---SRELEEYTSKQQLEQPPR----RRDNRDPDEGTSSANHRLRN 271
Query: 175 VHQAIFYEQVFDIVNREAFKQSLGVNVTGIRENYLQLGIGLGISIFLSLIPSNQGDLSVD 234
+ +IF E +F+ + R+ + S ++ I E+ L +G G I+ F L+ + D + D
Sbjct: 272 IQLSIFDELIFECLCRDVLQPSSATSLHEIGESSLDIGAGPSIASFFRLV---EDDAAND 328
Query: 235 SWVNQNVESGILPLDSHDGVKLAEEKDDILRKSGGYPNPLTYEIYLQQVFHEYLYGRAKN 294
+ + + V+ LPL + IYLQQ F+ L
Sbjct: 329 AALKE-VDVKRLPLAG------------------------SLRIYLQQGFYSMLLASIVQ 363
Query: 295 KPISTGTRVSGPPTKDGSGLLGHFCLSLAHRIFSNKVHVELENAVCGVPYLHLVSHPTWH 354
+ + G R +G ++ + LL +F + HR +K+ L+ V VP L SHPTW
Sbjct: 364 RS-APGPR-AGTGKEEPANLLKNFSVLARHRSAGDKIVSLLDTLVLQVPQLWFRSHPTWR 421
Query: 355 SRTSSWTVFLKVPQSIL------HAESNSRTAETAKSHFRTNVVVNDDCIHVEGEGTPNV 408
S+W V+ +P++I+ H E N+ ET+ + F+ +V+ + + +EG
Sbjct: 422 PFVSAWDVYFDIPEAIMNGGQMKHLEWNALVRETSAT-FQCTLVLRQEILSIEGLDGCMP 480
Query: 409 VGLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSF 468
+G ++ + M C +++LP +L Q+A +VI WL EEA+++G + RDFLS+ F
Sbjct: 481 LG---ASGQESTGMKSCVCSVSELPFFLLTQIAGKVIGWLEEEAVLLGPRVKRDFLSIVF 537
Query: 469 ELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLD 528
+ VSLVA P CI+WWL F ++ + A ++FLG L L+
Sbjct: 538 NIQNNGLVSLVAA--PSGY--CINWWLRFYS-FGSD-DTAAASGASAPASERFLGPLPLE 591
Query: 529 VLYSTLMDLV 538
L + + ++
Sbjct: 592 TLRAVVQRVI 601
>gi|442753715|gb|JAA69017.1| Putative rna polymerase ii transcription mediator rna polymerase ii
transcription mediator [Ixodes ricinus]
Length = 103
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 63/89 (70%), Gaps = 4/89 (4%)
Query: 99 LSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGVQSGD---SSKQCSKVKNSCSPRPSKEA 155
+ST+R+ HD+AGML IN+ P+ C S +F F+G QS D +SKQ +K ++S +
Sbjct: 1 MSTVRVSHDAAGMLTINMSPDLCHSLQFDFVGAQSDDILRNSKQ-NKSRSSIDHSLGETG 59
Query: 156 KESVNDDECVREKHSLLREVHQAIFYEQV 184
KES +D+ECV++ H+LLREVH AIF EQV
Sbjct: 60 KESSSDEECVKKTHTLLREVHGAIFNEQV 88
>gi|194691398|gb|ACF79783.1| unknown [Zea mays]
Length = 89
Score = 89.7 bits (221), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/88 (50%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 457 IKANRDFLSLSFELDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDAS 516
+ A DFL L +LDQGET+ LVAHVDP+D GC+SW+L ++ E K+S
Sbjct: 1 MNATIDFLCLYLDLDQGETLGLVAHVDPDDTYGCVSWYLTLDHHPTEEGKMS--AGSPEL 58
Query: 517 DYKKFLGHLSLDVLYSTLMDLVSLCGGG 544
+ ++FLG+LS ++LYSTLMDLV LC G
Sbjct: 59 EERRFLGYLSPELLYSTLMDLVKLCSTG 86
>gi|168043689|ref|XP_001774316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674308|gb|EDQ60818.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 440
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 29/147 (19%)
Query: 410 GLFKGRSEDMSSMNKYDCDLADLPVIILQQVASQVIRWLHEEALMVGIKANRDFLSLSFE 469
GL G + ++S C L++L +L Q+A+ ++ WLH EA +G++A + SL+FE
Sbjct: 307 GLPSGNGKRLTSTA---CTLSELSPFLLFQMAAHLVAWLHAEASGMGVEARLN--SLTFE 361
Query: 470 LDQGETVSLVAHVDPEDMRGCISWWLVMEDGFAAERKLSIDISDDASDYKKFLGHLSLDV 529
LD E VSLVA P I+W L +LS ++D+ +FLG L+L
Sbjct: 362 LDNFEDVSLVA--SPAVKSHTINWSL----------RLSGSRTEDSDATSRFLGALALQT 409
Query: 530 LYSTLMDLV------------SLCGGG 544
L ++++DLV SLCG G
Sbjct: 410 LRASVIDLVNEKLDVKPAGDASLCGEG 436
>gi|198426488|ref|XP_002123046.1| PREDICTED: hypothetical protein [Ciona intestinalis]
Length = 1189
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 75/177 (42%), Gaps = 27/177 (15%)
Query: 150 RPSKEAKESVNDDECVREKHSLLREVHQAIFYEQ----------VFDIVNREAFKQSLGV 199
R K+A VN C R LLRE + Y Q + +IV+RE KQ L
Sbjct: 522 RDVKQALRKVNS--CDRCGEVLLRECANVVMYAQQAAEVITSTALKEIVSRENLKQPLEE 579
Query: 200 NVTG--IRENYLQLGIGLGISIFLSLIPSNQGDLSVDSWVN-----QNVESGILPLDSHD 252
+ E Y I + +P N+ ++ + SWV ++V S + S++
Sbjct: 580 RAANASVLEAYRDTKIAEETKAYFENLPKNKENI-LTSWVEDKKCFRSVISVKVNGYSNE 638
Query: 253 GVKLAEEKDDILRKSGGYPNPLTYEIYLQQVF-------HEYLYGRAKNKPISTGTR 302
++ +EK DI ++SG NP T E Y++ ++ +L + P+ T R
Sbjct: 639 KPEILKEKPDIFQRSGLQMNPKTVECYIEDLYPVTRSLSSSFLNENTEEPPLQTRQR 695
>gi|239609191|gb|EEQ86178.1| RNA polymerase II mediator complex component SRB4 [Ajellomyces
dermatitidis ER-3]
Length = 692
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 15 LSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN-WKVKRQRVAAPAS 73
+ +S KL+ + Q+A LEQ++A E +++ ++ +++ WK+ R
Sbjct: 155 VDLSRGWKLETFDFAANKLLQAASRLEQEVAAETKYWADVLSIKEKGWKICRIPRERQTL 214
Query: 74 GNE-GFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGVQ 132
G + GF ++ P R L+ +R +L L P+ RS R + VQ
Sbjct: 215 GVQCGF---------LEATPTLRDRGLAALRRGDGGDLILDRGLQPSQPRSLR---VRVQ 262
Query: 133 SGDSSKQCSKVKNSCSPRPSKEAKESVNDDECVREKHSLLREVHQAIFYEQVFDIVNREA 192
D CSK+ + E D+ + + L R+V ++ E++F +NREA
Sbjct: 263 QHDQIVGCSKLI----------SLELAPGDDTIEHRIRLARDV---LYEEELFHELNREA 309
Query: 193 FKQSLGVNVTGIRENYLQLGIGLGISIFLSLI 224
++L + +EN +Q I + ++
Sbjct: 310 --RTLLQHGIQSKENLIQFQASDNQQILIDMV 339
>gi|261189001|ref|XP_002620913.1| RNA polymerase II mediator complex component SRB4 [Ajellomyces
dermatitidis SLH14081]
gi|239591917|gb|EEQ74498.1| RNA polymerase II mediator complex component SRB4 [Ajellomyces
dermatitidis SLH14081]
gi|327355907|gb|EGE84764.1| RNA polymerase II mediator complex component SRB4 [Ajellomyces
dermatitidis ATCC 18188]
Length = 692
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 91/212 (42%), Gaps = 29/212 (13%)
Query: 15 LSVSAATKLQCYRHLGIYFKQSAKSLEQQIAKEARFYGALIRLQQN-WKVKRQRVAAPAS 73
+ +S KL+ + Q+A LEQ++A E +++ ++ +++ WK+ R
Sbjct: 155 VDLSRGWKLETFDFAANKLLQAASRLEQEVAAETKYWADVLSIKEKGWKICRIPRERQTL 214
Query: 74 GNE-GFTIDLFDNSLYDSAPVSRPSSLSTIRIDHDSAGMLAINLPPNSCRSFRFGFLGVQ 132
G + GF ++ P R L+ +R +L L P+ RS R + VQ
Sbjct: 215 GVQCGF---------LEATPTLRDRGLAALRRGDGGDLILDRGLQPSQPRSLR---VRVQ 262
Query: 133 SGDSSKQCSKVKNSCSPRPSKEAKESVNDDECVREKHSLLREVHQAIFYEQVFDIVNREA 192
D CSK+ + E D+ + + L R+V ++ E++F +NREA
Sbjct: 263 QHDQIVGCSKLI----------SLELAPGDDTIEHRIRLARDV---LYEEELFHELNREA 309
Query: 193 FKQSLGVNVTGIRENYLQLGIGLGISIFLSLI 224
++L + +EN +Q I + ++
Sbjct: 310 --RTLLQHGIQSKENLIQFQASDNQQILIDMV 339
>gi|18311664|ref|NP_558331.1| hypothetical protein PAE0030 [Pyrobaculum aerophilum str. IM2]
gi|74566312|sp|Q8ZZX6.1|AUBA_PYRAE RecName: Full=RNA-binding protein AU-1; AltName: Full=AU-binding
protein
gi|18159062|gb|AAL62513.1| conserved hypothetical protein [Pyrobaculum aerophilum str. IM2]
Length = 443
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 7 LPNEVLSDLSVSAATKLQCYRHLGIYFKQSAK-SLEQQIAKEAR-FYGALIRLQQNWKVK 64
+P E L + A T+L+ Y +G+ FK SAK + E+QI KEA Y L++L
Sbjct: 166 IPQEDRLRLGILAETRLKQYASIGLRFKSSAKYADEEQIIKEAEVLYRELLQLSHGGPPG 225
Query: 65 RQRVAAPASGNEGFTIDLFDNSLYDSAPVSRPSSLSTIRIDH 106
A GN F + LFD + +R S++ T+R H
Sbjct: 226 ----AVLRRGN-CFAVVLFDRRSKEVLDSARASAVPTVRGHH 262
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,752,949,929
Number of Sequences: 23463169
Number of extensions: 372262361
Number of successful extensions: 823437
Number of sequences better than 100.0: 37
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 823294
Number of HSP's gapped (non-prelim): 47
length of query: 546
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 398
effective length of database: 8,886,646,355
effective search space: 3536885249290
effective search space used: 3536885249290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 80 (35.4 bits)