BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009017
(546 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 296/590 (50%), Positives = 365/590 (61%), Gaps = 104/590 (17%)
Query: 1 MVCTANDLSAWKDFPKGLRVLLL------DQDSSAAAELKFKLEAMDYIVSTFYNENEAL 54
MV TANDLS W++FPKGL+VLLL D D S+AAE + +LE+MDYIV+TF +E EAL
Sbjct: 1 MVITANDLSKWENFPKGLKVLLLLNGCDSDGDGSSAAETRSELESMDYIVTTFTDETEAL 60
Query: 55 SAFSDKPENFHVAIVEVTTSNTDGSFKFLETAKD-LPTIITSNIHCLSTMMKCIALGAVE 113
SA PE+FH+AIVEV S SFKFLE AKD LPTI+ S HC++T MKCIALGAVE
Sbjct: 61 SAVVKNPESFHIAIVEVNMSAESESFKFLEAAKDVLPTIMISTDHCITTTMKCIALGAVE 120
Query: 114 FLRKPLSEDKLRNLWQHVVHKAFNAGGSALSDSLKPVKESVVSMLHLKLENGESKNEKSE 173
FL+KPLS +KL+N+WQHVVHKAFN GGS +S SLKPVKESVVSMLHL+
Sbjct: 121 FLQKPLSPEKLKNIWQHVVHKAFNDGGSNVSISLKPVKESVVSMLHLE------------ 168
Query: 174 NTEYVLVPQQSDNEQSVPNDKYPAPSTPQLKQGGRLLDDIDCQDNTNF-------STEKE 226
T+ + +K PAPSTPQLKQ RLLD DCQ+N NF STEK+
Sbjct: 169 -TDMTI------------EEKDPAPSTPQLKQDSRLLDG-DCQENINFSMENVNSSTEKD 214
Query: 227 SAE--QD-GESKFVETTCGNSIAEGTLQEDK--PQRPRETIVKEEHDPTNGSKTE-CNML 280
+ E QD GESK V+TT L +DK + R KEE T +E + +
Sbjct: 215 NMEDHQDIGESKSVDTT------NRKLDDDKVVVKEERGDSEKEEEGETGDLISEKTDSV 268
Query: 281 PLPYEKDNLKGSNCVIENPSKASGLQNSCGNKANRKK-----------MKAVEQLGVDQA 329
+ ++D K N K+SG++N GNK +RKK ++AVEQLGVDQA
Sbjct: 269 DIHKKEDETKPIN-------KSSGIKNVSGNKTSRKKVDWTPELHKKFVQAVEQLGVDQA 321
Query: 330 IPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPKED-DRKWPHARDQML---RNY--- 382
IPSRILELMKV LTRHNVASHLQK+R HR++ILPK+D + +W +R+ RNY
Sbjct: 322 IPSRILELMKVGTLTRHNVASHLQKFRQHRKNILPKDDHNHRWIQSRENHRPNQRNYNVF 381
Query: 383 -YPHKPIMAFPPYHSNHLVPTGPVYPVWGAPSNHLAAVQMWAPPGYPPWQQAESWNWK-P 440
H+P+MA+P + + P G + P+W P + G PP W+WK P
Sbjct: 382 QQQHRPVMAYPVWGLPGVYPPGAIPPLWPPPLQSI---------GQPP-----PWHWKPP 427
Query: 441 YPGMPADAWGCPVMPLPNGPY---SSFPQGASGYHNSGVDDNSYAMPQNSVDLHPAEEVI 497
YP + +AWGCPV P G Y S+ G Y N G + MP + P EE++
Sbjct: 428 YPTVSGNAWGCPVGPPVTGSYITPSNTTAGGFQYPN-GAETGFKIMPAS----QPDEEML 482
Query: 498 DKVVKEAISKPWLPLPLGLKPPSADSVLAELSRQGISTIPPR---INGSH 544
D+VVKEAISKPWLPLPLGLKPPSA+SVLAEL+RQGIS +P INGSH
Sbjct: 483 DQVVKEAISKPWLPLPLGLKPPSAESVLAELTRQGISAVPSSSCLINGSH 532
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 109 bits (273), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/261 (38%), Positives = 131/261 (50%), Gaps = 69/261 (26%)
Query: 314 NRKKMKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPKE-DDRKWP 372
+RK ++AVEQLGVD+A+PSRILE+M V+ LTRHNVASHLQKYR HR+H+L +E + W
Sbjct: 157 HRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQKYRSHRKHLLAREAEAASWN 216
Query: 373 HARDQMLRNYYPH--------KPIMAFPPY----HSNHLVPTGPVYPVWGAPS------N 414
R + P + +PP+ H H P VWG P+ N
Sbjct: 217 LRRHATVAVPGVGGGGKKPWTAPALGYPPHVAPMHHGHFRPLH----VWGHPTWPKHKPN 272
Query: 415 HLAAVQM-------------WAPPGYPPWQQAESWNWKPYPGMPADAWGCPVMPLPNGPY 461
A+ W PG+PP+ W+ +P
Sbjct: 273 TPASAHRTYPMPAIAAAPASW--PGHPPY-----WHQQPL-------------------- 305
Query: 462 SSFPQG---ASGYHNS-GVDDNSYAMPQNSVDLHPAEEVIDKVVKEAISKPWLPLPLGLK 517
+PQG AS H+S GV +D+HP+ E ID + + ISKPWLPLPLGLK
Sbjct: 306 --YPQGYGMASSNHSSIGVPTRQLGPTNPPIDIHPSNESIDAAIGDVISKPWLPLPLGLK 363
Query: 518 PPSADSVLAELSRQGISTIPP 538
PPS D V+ EL RQG+S +PP
Sbjct: 364 PPSVDGVMTELQRQGVSNVPP 384
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 98.2 bits (243), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/259 (35%), Positives = 135/259 (52%), Gaps = 40/259 (15%)
Query: 314 NRKKMKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPKE-DDRKWP 372
+R+ ++AVEQLGVD+A+PSRILELM V LTRHNVASHLQKYR HR+H+L +E + W
Sbjct: 163 HRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQKYRSHRKHLLAREAEAANWT 222
Query: 373 HAR------------DQMLRNYYPHKPIMAFPPYHSNHLVPTG-------PVYPVWGAPS 413
R + + P + FPP + P P++ VWG P+
Sbjct: 223 RKRHIYGVDTGANLNGRTKNGWLAPAPTLGFPPPPPVAVAPPPVHHHHFRPLH-VWGHPT 281
Query: 414 NHLAAV-QMW----APPGY----PPWQQAESWNWKPY-----PGMPADAWGCPVMPLPNG 459
+ + +W PP PP+ ++S W P P +P A P+
Sbjct: 282 VDQSIMPHVWPKHLPPPSTAMPNPPFWVSDSPYWHPMHNGTTPYLPTVATRFRAPPVAGI 341
Query: 460 PYSSFPQGASGYHNSGVDDNSYAMPQNSVDLHPAEEVIDKVVKEAISKPWLPLPLGLKPP 519
P++ P +H + + + VDLHP++E +D + + +++PWLPLPLGL PP
Sbjct: 342 PHALPP-----HHTMYKPNLGFGGARPPVDLHPSKESVDAAIGDVLTRPWLPLPLGLNPP 396
Query: 520 SADSVLAELSRQGISTIPP 538
+ D V+ EL R G+S +PP
Sbjct: 397 AVDGVMTELHRHGVSEVPP 415
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 92.8 bits (229), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 93/269 (34%), Positives = 132/269 (49%), Gaps = 50/269 (18%)
Query: 314 NRKKMKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPKEDDRKWPH 373
+R+ ++AVEQLG+D+A+PSRILE+M ++ LTRHN+ASHLQKYR HR+H++ +E +
Sbjct: 190 HRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQKYRSHRKHMIAREAEAASWT 249
Query: 374 ARDQMLRNYYPHKPIMAFPPYHSNHLVPT--------------------GPVYPVWGAPS 413
R Q+ Y +A P + VPT P++ VWG P+
Sbjct: 250 QRRQI---YAAGGGAVAKRPESNAWTVPTIGFPPPPPPPPSPAPIQHFARPLH-VWGHPT 305
Query: 414 NHLAAVQMWAPPGYPPWQQAES------------WNWKPYPGMPADA--WGCPVMPLPNG 459
+ V +W P P A W+ PY PA G P M +P
Sbjct: 306 MDPSRVPVWPPRHLVPRGPAPPWVPPPPPSDPAFWH-HPYMRGPAHVPTQGTPCMAMPM- 363
Query: 460 PYSSFPQGASGYHNS----------GVDDNSYAMPQNSVDLHPAEEVIDKVVKEAISKPW 509
P + FP + + Q + + P+ E ID + + +SKPW
Sbjct: 364 PAARFPAPPVPGVVPCPMYRPLTPPALASKNQQDAQLQLQVQPSSESIDAAIGDVLSKPW 423
Query: 510 LPLPLGLKPPSADSVLAELSRQGISTIPP 538
LPLPLGLKPPS DSV+ EL RQG++ +PP
Sbjct: 424 LPLPLGLKPPSVDSVMGELQRQGVANVPP 452
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 35/53 (66%), Positives = 48/53 (90%)
Query: 314 NRKKMKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPKE 366
+R+ ++AVEQLG+D+A+PSRILELM +E LTRHN+ASHLQKYR HR+H++ +E
Sbjct: 225 HRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASHLQKYRSHRKHLMARE 277
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 64/124 (51%), Gaps = 4/124 (3%)
Query: 14 FPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTT 73
FP GLRVL++D D + L+ L Y V+ ALS F + I +V
Sbjct: 33 FPSGLRVLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLLRKNKHGFDIVISDVHM 92
Query: 74 SNTDGSFKFLETAK---DLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQH 130
+ DG FK LE DLP I+ S S ++K + GAV++L KP+ + L+N+WQH
Sbjct: 93 PDMDG-FKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALKNIWQH 151
Query: 131 VVHK 134
VV K
Sbjct: 152 VVRK 155
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%)
Query: 318 MKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 362
+ AV QLGV++A+P +ILELM V GLTR NVASHLQKYR++ R +
Sbjct: 251 VAAVNQLGVEKAVPKKILELMNVPGLTRENVASHLQKYRIYLRRL 295
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 76.6 bits (187), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 7 DLSAWKDFPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHV 66
+L A FP G+RVL +D D + L+ L Y V+T +AL + F +
Sbjct: 6 NLEALDQFPVGMRVLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELLRENKNKFDL 65
Query: 67 AIVEVTTSNTDGSFKFLETAK---DLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDK 123
I +V + DG FK LE DLP I+ S +MK + GA ++L KP+ ++
Sbjct: 66 VISDVDMPDMDG-FKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEE 124
Query: 124 LRNLWQHVVHKAFN 137
L+N+WQHVV F+
Sbjct: 125 LKNIWQHVVRSRFD 138
Score = 60.8 bits (146), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 315 RKKMKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 362
+K + AV QLG ++A+P +IL+LM VE LTR NVASHLQK+R++ + I
Sbjct: 206 KKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQKFRLYLKRI 253
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 14 FPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTT 73
FP LRVL++D D + L+ L Y V+ ALS F + I +V
Sbjct: 24 FPANLRVLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLLRKNKNGFDIVISDVHM 83
Query: 74 SNTDGSFKFLETAK---DLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQH 130
+ DG FK LE DLP I+ S S ++K + GAV++L KP+ + L+N+WQH
Sbjct: 84 PDMDG-FKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALKNIWQH 142
Query: 131 VVHKAFN 137
VV K N
Sbjct: 143 VVRKKRN 149
Score = 65.9 bits (159), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%)
Query: 318 MKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 362
+ AV QLGVD+A+P +ILE+M V GLTR NVASHLQKYR++ R +
Sbjct: 230 VAAVNQLGVDKAVPKKILEMMNVPGLTRENVASHLQKYRIYLRRL 274
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 14 FPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTT 73
+P GLRVL++D D S + ++ L Y V+T+ N EA+ D P+ + I +
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 74 SNTDGSFKFLETAKD--LPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHV 131
DG E +PT+I ++ +T+MK +A GA +FL KP+ ++L N+WQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 132 VHK 134
K
Sbjct: 127 FRK 129
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 253 DKPQRPRETIVKEEHDP--TNGSKTECNMLPLPYE-KDNLKGSNCVIENPSKASGLQNSC 309
+KP P + P T + TE ++ PL E +D++ N I + + +
Sbjct: 144 EKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTW 203
Query: 310 GNKANRKKMKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILP 364
+ +R+ + AV LG D+A+P +IL +MKV+ LTR VASHLQKYRM + +P
Sbjct: 204 TTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIP 258
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 66/123 (53%), Gaps = 2/123 (1%)
Query: 14 FPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTT 73
+P GLRVL++D D S + ++ L Y V+T+ N EA+ D P+ + I +
Sbjct: 7 WPYGLRVLVIDDDCSYLSVMEDLLLKCSYKVTTYKNVREAVPFILDNPQIVDLVISDAFF 66
Query: 74 SNTDGSFKFLETAKD--LPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHV 131
DG E +PT+I ++ +T+MK +A GA +FL KP+ ++L N+WQH+
Sbjct: 67 PTEDGLLILQEVTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHI 126
Query: 132 VHK 134
K
Sbjct: 127 FRK 129
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 253 DKPQRPRETIVKEEHDP--TNGSKTECNMLPLPYE-KDNLKGSNCVIENPSKASGLQNSC 309
+KP P + P T + TE ++ PL E +D++ N I + + +
Sbjct: 144 EKPGHPPSILAMARATPATTRSTATEASLAPLENEVRDDMVNYNGEITDIRDLGKSRLTW 203
Query: 310 GNKANRKKMKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILP 364
+ +R+ + AV LG D+A+P +IL +MKV+ LTR VASHLQKYRM + +P
Sbjct: 204 TTQLHRQFIAAVNHLGEDKAVPKKILGIMKVKHLTREQVASHLQKYRMQLKKSIP 258
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 7 DLSAWKDFPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHV 66
++ FP G+RVL +D D + L+ L+ Y V+T AL + F +
Sbjct: 6 EIEVLDQFPVGMRVLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELLRENKNKFDL 65
Query: 67 AIVEVTTSNTDGSFKFLETA---KDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDK 123
I +V + DG FK LE DLP I+ S +MK + GA ++L KP+ ++
Sbjct: 66 VISDVDMPDMDG-FKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEE 124
Query: 124 LRNLWQHVV 132
L+N+WQHVV
Sbjct: 125 LKNIWQHVV 133
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 316 KKMKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPKEDDRKWPHAR 375
K + AV+ LGV++A+P +IL+LM V+ LTR NVASHLQK+R+ + + + A
Sbjct: 195 KFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQKFRVALKKVSDDAIQQANRAAI 254
Query: 376 DQMLRNYYPHKPIMAFPPYHSNHLVPTG 403
D K + F YH + +P G
Sbjct: 255 DSHFMQMNSQKGLGGF--YHHHRGIPVG 280
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 8/113 (7%)
Query: 315 RKKMKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPKEDDRKWPHA 374
+K + AV+QLG+D+A+P +IL+LM +EGLTR NVASHLQKYR++ + I + P A
Sbjct: 205 QKFVSAVQQLGLDKAVPKKILDLMSIEGLTRENVASHLQKYRLYLKKIDEGQQQNMTPDA 264
Query: 375 RDQMLRNYYPHKPIMAFPPYHSNHLVPTGPVYPVWGAPSNHLAAVQMWAPPGY 427
+Y+ + + + +P+ + +HL +Q PP Y
Sbjct: 265 FGTRDSSYFQMAQLDGLRDFTAARQIPSSGLL-----SRSHLTKLQ---PPMY 309
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 14 FPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTT 73
FP G+RVL +D + + +L+ L Y V+ +AL + F + I +V
Sbjct: 14 FPVGMRVLAVDDNPTCLRKLEELLLRCKYHVTKTMESRKALEMLRENSNMFDLVISDVEM 73
Query: 74 SNTDGSFKFLETA--KDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHV 131
+TDG FK LE DLP I+ S ++MK I GA ++L KP+ +L+N+W HV
Sbjct: 74 PDTDG-FKLLEIGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQNIWHHV 132
Query: 132 VHK 134
V K
Sbjct: 133 VKK 135
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
Query: 15 PKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTS 74
P GLRVL++D D + L+ L+ Y V+T EAL ++ + + + I +V
Sbjct: 8 PVGLRVLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLLRERKDGYDIVISDVNMP 67
Query: 75 NTDGSFKFLETAK---DLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHV 131
+ DG FK LE DLP I+ S S +MK + GA ++L KP+ +L+ +WQHV
Sbjct: 68 DMDG-FKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELKIIWQHV 126
Query: 132 VHKAF 136
+ K
Sbjct: 127 LRKKL 131
Score = 50.4 bits (119), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 316 KKMKAVEQLGVD-QAIPSRILELMKVEGLTRHNVASHLQKYRMH 358
K + AV Q+G D +A P +IL+LM V LTR NVASHLQKYR++
Sbjct: 205 KFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQKYRLY 248
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 8 LSAWKDF-PK-GLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFH 65
L W+ F PK LRVLL++ D S + L Y V+ + +A KPE+
Sbjct: 38 LVKWERFLPKIALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEMLKGKPESVD 97
Query: 66 VAIVEVTTSNTDGSFKFL------ETAKDLPTIITSNIHCLSTMMKCIALGAVEFLRKPL 119
+ + EV + G + L + K++P I+ S ++T+ KC+ GA ++L KPL
Sbjct: 98 LILTEVDLPSISG-YALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPL 156
Query: 120 SEDKLRNLWQHV 131
++LRNLWQHV
Sbjct: 157 RRNELRNLWQHV 168
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 5/125 (4%)
Query: 14 FPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTT 73
FP GLR+L++D D+S L+ L + Y V+ + AL+ ++ ++F + + +V
Sbjct: 7 FPSGLRILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTILRERKDSFDLVLSDVHM 66
Query: 74 SNTDGSFKFLETA----KDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQ 129
+G + L+ DLP I+ S +T+M I GA ++L KP+ ++L+N+WQ
Sbjct: 67 PGMNG-YNLLQQVGLLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQ 125
Query: 130 HVVHK 134
HVV +
Sbjct: 126 HVVRR 130
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 37/45 (82%)
Query: 318 MKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 362
+ AV +LG+D+A+P RILELM V GL+R NVASHLQK+R++ + +
Sbjct: 214 VNAVNKLGIDKAVPKRILELMNVPGLSRENVASHLQKFRLYLKRL 258
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Query: 11 WKDF--PKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAI 68
W+ F K ++VLL+D D S + L Y V N +A + D + + +
Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 112
Query: 69 VEVTTSNTDGSFKFLE------TAKDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSED 122
EV G L K++P I+ S+ + T+ KC++ GAV+FL KP+ ++
Sbjct: 113 TEVVMPGVSG-ISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKN 171
Query: 123 KLRNLWQHV 131
+L+NLWQHV
Sbjct: 172 ELKNLWQHV 180
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 9/129 (6%)
Query: 11 WKDF--PKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAI 68
W+ F K ++VLL+D D S + L Y V N +A + D + + +
Sbjct: 53 WERFIQKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYLEDMQNSIDLVL 112
Query: 69 VEVTTSNTDGSFKFLE------TAKDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSED 122
EV G L K++P I+ S+ + T+ KC++ GAV+FL KP+ ++
Sbjct: 113 TEVVMPGVSG-ISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKN 171
Query: 123 KLRNLWQHV 131
+L+NLWQHV
Sbjct: 172 ELKNLWQHV 180
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 11 WKDF--PKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAI 68
W+ F K LRVLL++ D S + L Y V N A D + + +
Sbjct: 72 WERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVL 131
Query: 69 VEVTTSNTDG-----SFKFLETAKDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDK 123
EV G + KD+P I+ S+ + T+ KC++ GAV+FL KP+ +++
Sbjct: 132 TEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNE 191
Query: 124 LRNLWQHV 131
L+NLWQHV
Sbjct: 192 LKNLWQHV 199
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 67.0 bits (162), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 62/128 (48%), Gaps = 7/128 (5%)
Query: 11 WKDF--PKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAI 68
W+ F K LRVLL++ D S + L Y V N A D + + +
Sbjct: 72 WERFLPVKTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCLEDLQNHIDLVL 131
Query: 69 VEVTTSNTDG-----SFKFLETAKDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDK 123
EV G + KD+P I+ S+ + T+ KC++ GAV+FL KP+ +++
Sbjct: 132 TEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNE 191
Query: 124 LRNLWQHV 131
L+NLWQHV
Sbjct: 192 LKNLWQHV 199
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 65.5 bits (158), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 4/125 (3%)
Query: 13 DFPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVT 72
+FP+GLRVL+ D+D S L+ L+ Y V+ N+A+ + F +A+++V
Sbjct: 37 NFPEGLRVLVFDEDPSYLLILERHLQKFQYQVTICNEVNKAMHTLRNHRNRFDLAMIQVN 96
Query: 73 TSNTDGSFKFLE---TAKDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQ 129
+ D F+FL + DLP II S + ++ K + GA ++L KP+ + LR +++
Sbjct: 97 NAEGD-IFRFLSEIGSEMDLPIIIISEDDSVKSVKKWMINGAADYLIKPIRPEDLRIVFK 155
Query: 130 HVVHK 134
H+V K
Sbjct: 156 HLVKK 160
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 254 KPQRPRETIVKEEHDPTNGSKTECNMLPLPYEKDNLKGSNCV---IENPSKASGLQNSCG 310
K R R ++V E + G K+ + K S+C+ + + +C
Sbjct: 159 KKMRERRSVVTGEAEKAAGEKSSSVGDSTIRNPNKSKRSSCLEAEVNEEDRHDHNDRACA 218
Query: 311 NKANRKK-----------MKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQ 353
+ A +++ + AV+ LG+++A+P +IL++MKV+ ++R NVASHLQ
Sbjct: 219 SSAKKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISRENVASHLQ 272
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 7/128 (5%)
Query: 18 LRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTD 77
+RVLL + D S + L Y V+ + +A +K N + + EV
Sbjct: 43 VRVLLAEGDDSTRHIICALLRKCGYRVAAASDGVKAWDILKEKSFNIDLVLTEVELPLMS 102
Query: 78 GSFKFLET------AKDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHV 131
G F L T K++P I+ S+ +S + KC+ GA +FL KP+ +++LRNLWQHV
Sbjct: 103 G-FLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQHV 161
Query: 132 VHKAFNAG 139
K ++G
Sbjct: 162 WRKQLSSG 169
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 4 TANDLSAWKDFPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPEN 63
T+ S FP VL++D + + +K ++ Y VS + +AL+ +
Sbjct: 20 TSEITSLLSQFPGNTNVLVVDTNFTTLLNMKQIMKQYAYQVSIETDAEKALAFLTSCKHE 79
Query: 64 FHVAIVEVTTSNTDG--SFKFLETAKDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSE 121
++ I + DG + K + + DLP +I S+ + ++MK GA +++ KP+ E
Sbjct: 80 INIVIWDFHMPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKE 139
Query: 122 DKLRNLWQHVVHKAF 136
+ + N+WQH+V K
Sbjct: 140 EVMANIWQHIVRKRL 154
Score = 43.1 bits (100), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 37/48 (77%), Gaps = 4/48 (8%)
Query: 315 RKKMKAVEQLG-VDQAIPSRILEL---MKVEGLTRHNVASHLQKYRMH 358
+K ++A+E +G +++A P ++E M++EG+TR NVASHLQK+R++
Sbjct: 226 QKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQKHRIN 273
>sp|Q9LKL2|APRR1_ARATH Two-component response regulator-like APRR1 OS=Arabidopsis thaliana
GN=APRR1 PE=1 SV=1
Length = 618
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 5/119 (4%)
Query: 18 LRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTD 77
+R+LL D DS++ E+ L Y V+ + + + A + + + + + E+
Sbjct: 19 VRILLCDNDSTSLGEVFTLLSECSYQVTAVKSARQVIDALNAEGPDIDIILAEIDLPMAK 78
Query: 78 GS--FKFLETAKDL---PTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHV 131
G +++ KDL P I+ S + ++KC+ LGA ++L KPL ++L NLW H+
Sbjct: 79 GMKMLRYITRDKDLRRIPVIMMSRQDEVPVVVKCLKLGAADYLVKPLRTNELLNLWTHM 137
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 60.1 bits (144), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 69/135 (51%), Gaps = 9/135 (6%)
Query: 5 ANDLSAWKDF-PKG-LRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPE 62
++++ W+ + PK LRVLL++ D S + L Y V + A +K
Sbjct: 22 SSEVVQWEKYLPKTVLRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVLKEKSH 81
Query: 63 NFHVAIVEVTTSNTDGSFKFL------ETAKDLPTIITSNIHCLSTMMKCIALGAVEFLR 116
N + + E+ + G F L E K++P I+ S+ + ++KC+ GA ++L
Sbjct: 82 NIDLILTELDLPSISG-FALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLI 140
Query: 117 KPLSEDKLRNLWQHV 131
KP+ +++L+NLWQHV
Sbjct: 141 KPMRKNELKNLWQHV 155
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 59.7 bits (143), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 16 KGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTT-- 73
+ L+VLL++ D S + L+ Y V+ + EA D+ + + EV
Sbjct: 62 RSLKVLLVENDDSTRHIVTALLKNCSYEVTAVPDVLEAWRILEDEKSCIDLVLTEVDMPV 121
Query: 74 -SNTDGSFKFL--ETAKDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQH 130
S T K + +T K++P I+ S+ + + KC++ GAV+FL KP+ +++L+NLWQH
Sbjct: 122 HSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQH 181
Query: 131 V 131
V
Sbjct: 182 V 182
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 59.3 bits (142), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 62/119 (52%), Gaps = 5/119 (4%)
Query: 18 LRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVT--TSN 75
+R+LL D D S++ E+ L Y V+ + + ++ + + + + EV S
Sbjct: 28 VRILLCDSDPSSSREVLRLLCNCSYQVTCAKSPRQVINVLNCEAGEIDIILAEVDLPVSK 87
Query: 76 TDGSFKFLETAKDL---PTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHV 131
K++ K+L P I+ SN +S ++KC+ LGA E+L KPL ++L NLW HV
Sbjct: 88 CFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMNELLNLWTHV 146
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 318 MKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHI 362
++A+ +G+D+A+P +IL M V LTR NVASHLQKYR+ R +
Sbjct: 236 LQAIRHIGLDKAVPKKILAFMSVPYLTRENVASHLQKYRIFLRRV 280
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 318 MKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPKE-----DDRKWP 372
++A++ +G D+ +P +IL +M V LTR NVASHLQKYR+ + ++ + DR
Sbjct: 239 LQAIQHIGYDKVVPKKILAIMNVPYLTRENVASHLQKYRLFVKRVVHQGRFSMLSDR--- 295
Query: 373 HARDQMLRNYYPHKPIMAF 391
+D M R + +P + +
Sbjct: 296 -GKDSMFRQTHIKEPYVNY 313
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 56.2 bits (134), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 4/127 (3%)
Query: 16 KGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSN 75
K RVLL+ DS+++ LK + Y V+ + + EA++ + I + +
Sbjct: 39 KSNRVLLVGADSNSS--LKNLMTQYSYQVTKYESGEEAMAFLMKNKHEIDLVIWDFHMPD 96
Query: 76 TDG--SFKFLETAKDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHVVH 133
+G + + DLP +I S+ + T+M+ I GA +FL KP+S++ + LW+HV
Sbjct: 97 INGLDALNIIGKQMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRHVYR 156
Query: 134 KAFNAGG 140
K + G
Sbjct: 157 KRMSKSG 163
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 32/114 (28%)
Query: 285 EKDNLKGSNCVIENPSKASGLQNSCGNKANRKKMK----------------AVEQLG-VD 327
E+DNL SN G +N+C +K + K AVE++G ++
Sbjct: 184 EQDNLYESN--------EEGSKNTCDHKEEKSPTKKPRMQWTPELHHKFEVAVEKMGSLE 235
Query: 328 QAIPSRILELMK----VEGLTRHNVASHLQKYRM-HRRHILPKE--DDRKWPHA 374
+A P IL+ M+ V+GLTR+NVASHLQKYR ++ P+E +D W +A
Sbjct: 236 KAFPKTILKYMQEELNVQGLTRNNVASHLQKYRQSSKKTCTPQEPQEDFVWGNA 289
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 7/128 (5%)
Query: 11 WKDF--PKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAI 68
W+ F + +RVLL++ D + L Y V N +A D + + +
Sbjct: 69 WERFLHVRTIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNNHIDIVL 128
Query: 69 VEVTTSNTDGS---FKFL--ETAKDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDK 123
EV G K L ++ +++P I+ S+ + + KC++ GAV+FL KP+ +++
Sbjct: 129 TEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNE 188
Query: 124 LRNLWQHV 131
L+ LWQHV
Sbjct: 189 LKILWQHV 196
>sp|O23100|APRR8_ARATH Putative two-component response regulator-like APRR8 OS=Arabidopsis
thaliana GN=APRR8 PE=2 SV=2
Length = 367
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 55/126 (43%), Gaps = 3/126 (2%)
Query: 14 FPKGLRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTT 73
F + VLLLD D++ A L + Y V ++ ++K + + + E
Sbjct: 10 FSNDICVLLLDSDATCLANLSEMIRKCGYKVVATTRADDLPLIINNKDKKIDLVLAEFRL 69
Query: 74 SNTDGSFKFLETAKDLPTI--ITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHV 131
+ ++ LE + + I + S H +++C+ GA L KPL E+ + LWQ
Sbjct: 70 IEMN-KYELLEKIRSICEIPVVVSGAHVKDAIVECLCRGAKLCLEKPLMENDFKILWQFT 128
Query: 132 VHKAFN 137
V + N
Sbjct: 129 VSRQRN 134
>sp|P13632|DCTD_RHIME C4-dicarboxylate transport transcriptional regulatory protein DctD
OS=Rhizobium meliloti (strain 1021) GN=dctD PE=1 SV=3
Length = 460
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 50/108 (46%), Gaps = 5/108 (4%)
Query: 20 VLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTDGS 79
V L+D D ++ LE + VS+F + EAL+ S + + I ++ DG
Sbjct: 7 VFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLS--ADFAGIVISDIRMPGMDGL 64
Query: 80 FKF---LETAKDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKL 124
F L DLP I+ + + ++ I GA +F+ KP + D+L
Sbjct: 65 ALFRKILALDPDLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRL 112
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 13/124 (10%)
Query: 18 LRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTD 77
+ +LL+D D+++ A L L+ V + ++ALS + + + I + + D
Sbjct: 13 ISILLIDHDTASIASLTSMLQQFSKRVMSVDVASKALSMIEKQKKEIGLIIANIEMPHID 72
Query: 78 G-SFKFLETAKDLPTII------TSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQH 130
SF KD+P I+ T L T C +L KP+S D ++N+WQH
Sbjct: 73 SHSFLNALLLKDIPLILINPEIKTKEPSDLLTKRACFSLD------KPISNDDIKNMWQH 126
Query: 131 VVHK 134
V K
Sbjct: 127 VFSK 130
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Query: 301 KASGLQNSCGNKANRKK-MKAVEQLGVDQAIPSRILELMKVEGLTRHNVASHLQKYRMHR 359
K+ G + S N K + A+ LG + P ILE+M LT V SHLQKY+
Sbjct: 218 KSVGRRKSLWNSERHMKFIAAISILGEEDFRPKSILEIMNDPNLTHRQVGSHLQKYKAQI 277
Query: 360 RHI---LPKEDDR 369
I LP+ + R
Sbjct: 278 DQISYTLPRNESR 290
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 41.6 bits (96), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%), Gaps = 1/39 (2%)
Query: 320 AVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYRM 357
AV QLG D+A P I+ +M V+GLT +++ SHLQK+R+
Sbjct: 50 AVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQKFRL 88
>sp|Q8Z333|ZRAR_SALTI Transcriptional regulatory protein ZraR OS=Salmonella typhi GN=zraR
PE=3 SV=1
Length = 441
Score = 41.2 bits (95), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 20 VLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTDGS 79
+L++D D S L+ L Y V+ Y+ ++AL+ +K F + + +V + DG
Sbjct: 8 ILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQVREKV--FDLVLCDVRMAEMDGI 65
Query: 80 FKFLETAK---DLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHVVHKAF 136
E +P +I + + T ++ + GA+++L KPL D+L Q + KA
Sbjct: 66 ATLKEIKALNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRL----QETLEKAL 121
>sp|P25852|ZRAR_SALTY Transcriptional regulatory protein ZraR OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=zraR PE=1 SV=2
Length = 441
Score = 40.8 bits (94), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 20 VLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTDGS 79
+L++D D S L+ L Y V+ Y+ ++AL+ +K F + + +V + DG
Sbjct: 8 ILVVDDDVSHCTILQALLRGWGYNVALAYSGHDALAQVREKV--FDLVLCDVRMAEMDGI 65
Query: 80 FKFLETAK---DLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHVVHKAF 136
E +P +I + + T ++ + GA+++L KPL D+L Q + KA
Sbjct: 66 ATLKEIKALNPAIPILIMTAFSSVETAVEALKAGALDYLIKPLDFDRL----QETLEKAL 121
>sp|Q68WH4|NTRXL_RICTY Putative response regulator NtrX-like OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=RT0550 PE=3 SV=1
Length = 475
Score = 40.0 bits (92), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 18 LRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTD 77
L VL+LD + S + L+ + N +AL S+KP + + + + S D
Sbjct: 4 LDVLILDDEESIRNLIAANLKDEGFNPKVAANSTQALKIISEKPVSAVILDIWLQGSEID 63
Query: 78 GSFKFLETAKD----LPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQH 130
G LE K +P II S + T + I +GA +++ KP + DKL L +
Sbjct: 64 G-LGVLEIIKKRYPLIPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLIILLKR 119
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 40.0 bits (92), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Query: 318 MKAVEQLG-VDQAIPSRILELMKVEGLTRHNVASHLQKYRMHR 359
++AV QLG ++A P +L+L+ GLT ++V SHLQKYR R
Sbjct: 245 VEAVNQLGGSERATPKAVLKLLNNPGLTIYHVKSHLQKYRTAR 287
>sp|Q92HC2|NTRXL_RICCN Putative response regulator NtrX-like OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=RC0849 PE=3 SV=1
Length = 474
Score = 40.0 bits (92), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 51/111 (45%), Gaps = 5/111 (4%)
Query: 18 LRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTD 77
L VL++D + S + L+ + N +AL S+KP + V + + S D
Sbjct: 4 LDVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSEKPVSAVVLDIWLQGSEID 63
Query: 78 GSFKFLETAKD----LPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKL 124
G LE K +P II S + T + I +GA +++ KP + DKL
Sbjct: 64 G-LGILEIIKKRYPLMPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKL 113
>sp|P28835|YCF27_PORAE Probable transcriptional regulator ycf27 OS=Porphyridium aerugineum
GN=ycf27 PE=3 SV=1
Length = 240
Score = 39.7 bits (91), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 64/119 (53%), Gaps = 8/119 (6%)
Query: 19 RVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTDG 78
++L++D ++S L+ +L + Y V + + EALS F K E+ ++ ++++ DG
Sbjct: 5 KILVIDDEASIRRILETRLSIIGYDVISAADGEEALSIF--KREHPNLVVLDLMMPKLDG 62
Query: 79 SFKFLETAK--DLPTIITSNIHCLSTMMKCIALGAVEFLRKPLS----EDKLRNLWQHV 131
E K D+P I+ + + +S + + LGA +++ KP S E ++R++ + V
Sbjct: 63 YGVCQELRKESDVPIIMLTALSDVSDRITGLELGADDYIVKPFSPKELEARIRSVLRRV 121
>sp|Q4UL27|NTRXL_RICFE Putative response regulator NtrX-like OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0895 PE=3 SV=1
Length = 475
Score = 39.7 bits (91), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 18 LRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTD 77
L VL++D + S + L+ + N +AL S+KP + + + + S D
Sbjct: 4 LDVLIVDDEESIRNLIAANLKDEGFNPKVAANSTQALKILSEKPVSAVILDIWLQGSEID 63
Query: 78 GSFKFLETAKD----LPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQH 130
G LE K +P II S + T + I +GA +++ KP + DKL L +
Sbjct: 64 G-LGILEIIKKRYPLMPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLVILLKR 119
>sp|Q9ZCY9|NTRXL_RICPR Putative response regulator NtrX-like OS=Rickettsia prowazekii
(strain Madrid E) GN=RP562 PE=3 SV=1
Length = 475
Score = 38.9 bits (89), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 18 LRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTD 77
L VL++D + S + L+ + N +AL S+KP + + + + S D
Sbjct: 4 LDVLIVDDEESIRNLIAANLKDEGFNPKIAANSTQALKIISEKPVSAVILDIWLQGSEID 63
Query: 78 GSFKFLETAKD----LPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQH 130
G LE K +P II S + T + I +GA +++ KP + DKL L +
Sbjct: 64 G-LGVLEIIKKRYPLMPVIIISGHGTIETAVNAIKMGAYDYIEKPFNNDKLIILLKR 119
>sp|O78428|YCF27_GUITH Probable transcriptional regulator ycf27 OS=Guillardia theta
GN=ycf27 PE=3 SV=1
Length = 254
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
Query: 19 RVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAF-SDKPENFHVAIVEVTTSNTD 77
+VL++D ++S L+ +L + Y V T + EAL+ F + P+ V I+++ D
Sbjct: 16 KVLIVDDEASIRKILETRLSMIGYFVVTASDGEEALNLFHQEMPD---VVILDIMMPKLD 72
Query: 78 GSFKFLETAKD--LPTIITSNIHCLSTMMKCIALGAVEFLRKPLS----EDKLRNLWQHV 131
G E KD +P I+ + + ++ + + LGA +++ KP S E ++R + +
Sbjct: 73 GYGVCQEIRKDSDVPIIMLTALGDVADRITGLELGADDYVVKPFSPKELEARIRAVLRRT 132
Query: 132 VHKAFNA 138
AF++
Sbjct: 133 NKAAFSS 139
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis
thaliana GN=At1g14600 PE=2 SV=2
Length = 255
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 314 NRKKMKAVEQLGVD-QAIPSRILELMKVEGLTRHNVASHLQKYRMHRRHILPK 365
+R + AV+ LG +A P +L++M V+GLT +V SHLQ YR R +L K
Sbjct: 33 HRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQMYRGSRITLLGK 85
>sp|Q1XDC9|YCF27_PORYE Probable transcriptional regulator ycf27 OS=Porphyra yezoensis
GN=ycf27 PE=3 SV=2
Length = 243
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 19 RVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTDG 78
++L++D ++S L+ +L + Y V T N EAL F + E + +++V DG
Sbjct: 7 KILVVDDEASIRRILETRLTIIGYEVITASNGEEALLVF--RKEYPSLVVLDVMMPKLDG 64
Query: 79 SFKFLETAK--DLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHVVHKAF 136
E K D+P I+ + + + + + +GA +++ KP S +L + V+ +A
Sbjct: 65 YGVCQELRKESDVPIIMLTALGEVCDRITGLEIGADDYVVKPFSPKELEARIRSVLRRA- 123
Query: 137 NAGGSALSDSLKPVKESVVSMLHLKLENGESKNEKSENTEYV 178
++ SL ++S+ LK++ +K + +N E V
Sbjct: 124 ----DKITTSLGVPNSGIISIGFLKIDT--NKRQVYKNNERV 159
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 316 KKMKAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 356
+ + AVE LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 336 RFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 377
>sp|Q9APD9|ZRAR_KLEOX Transcriptional regulatory protein ZraR OS=Klebsiella oxytoca
GN=zraR PE=3 SV=1
Length = 443
Score = 38.5 bits (88), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 55/113 (48%), Gaps = 13/113 (11%)
Query: 20 VLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTDGS 79
+L++D D S L+ L Y V+ N +AL +K F + + ++ + DG
Sbjct: 8 ILVVDDDISHCTILQALLRGWGYRVALANNGLQALEKVREKV--FDLVLCDIRMAEMDG- 64
Query: 80 FKFLETAKDL-------PTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLR 125
+ET K++ P +I + + T ++ + GA+++L KPL DKL+
Sbjct: 65 ---IETLKEIKTFNPSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQ 114
>sp|A1TEL7|MPRA_MYCVP Response regulator MprA OS=Mycobacterium vanbaalenii (strain DSM
7251 / PYR-1) GN=mprA PE=3 SV=1
Length = 231
Score = 38.5 bits (88), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 18 LRVLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAF-SDKPENFHVAIVEVTTSNT 76
+R+L++D D + L+ L Y V + EAL SD+P+ +++V
Sbjct: 3 VRILVVDDDRAVRESLRRSLSFNGYSVELAQDGREALDLIASDRPD---AVVLDVMMPRL 59
Query: 77 DG---SFKFLETAKDLPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHVVH 133
DG + T DLP ++ + +S + + GA ++L KP + ++L + ++
Sbjct: 60 DGLEVCRQLRSTGDDLPILVLTARDSVSERVAGLDAGADDYLPKPFALEELLARMRALLR 119
Query: 134 KAF---NAGGSA---LSD-SLKPVKESV 154
+ AG SA SD SL PV V
Sbjct: 120 RTTPDDGAGESAAMTFSDLSLDPVTREV 147
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 38.5 bits (88), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 318 MKAVEQLGV-DQAIPSRILELMKVEGLTRHNVASHLQKYR 356
+ AVE LG ++A P +LELM V+ LT +V SHLQ YR
Sbjct: 227 VHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYR 266
>sp|P23221|FIXJ_BRAJA Transcriptional regulatory protein FixJ OS=Bradyrhizobium japonicum
(strain USDA 110) GN=fixJ PE=3 SV=1
Length = 205
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 7/120 (5%)
Query: 20 VLLLDQDSSAAAELKFKLEAMDYIVSTFYNENEALSAFSDKPENFHVAIVEVTTSNTDGS 79
+ ++D D++ L F L++ + V+ F + L A +F + +V DG
Sbjct: 7 IYVIDDDAAMRDSLNFLLDSAGFGVTLFDDAQAFLDALPGL--SFGCVVSDVRMPGLDG- 63
Query: 80 FKFLETAKD----LPTIITSNIHCLSTMMKCIALGAVEFLRKPLSEDKLRNLWQHVVHKA 135
+ L+ K P +I + + ++ + LGAV+FL KP +D+L + + + +A
Sbjct: 64 IELLKRMKAQQSPFPILIMTGHGDVPLAVEAMKLGAVDFLEKPFEDDRLTAMIESAIRQA 123
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 223,838,543
Number of Sequences: 539616
Number of extensions: 10343637
Number of successful extensions: 21182
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 185
Number of HSP's that attempted gapping in prelim test: 20990
Number of HSP's gapped (non-prelim): 297
length of query: 546
length of database: 191,569,459
effective HSP length: 122
effective length of query: 424
effective length of database: 125,736,307
effective search space: 53312194168
effective search space used: 53312194168
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 64 (29.3 bits)