Query 009026
Match_columns 546
No_of_seqs 136 out of 1450
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 17:08:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009026.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009026hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3p9d_H T-complex protein 1 sub 100.0 2E-120 6E-125 989.0 36.7 544 1-546 1-567 (568)
2 1a6d_B Thermosome (beta subuni 100.0 3E-114 9E-119 937.5 52.1 528 11-545 7-539 (543)
3 3ruv_A Chaperonin, CPN; double 100.0 9E-113 3E-117 924.9 56.6 516 12-535 6-526 (543)
4 3ko1_A Chaperonin; 9-fold symm 100.0 1E-113 5E-118 930.7 49.3 527 10-544 15-547 (553)
5 3iyg_A T-complex protein 1 sub 100.0 4E-112 1E-116 918.1 59.0 506 18-529 3-529 (529)
6 1q3q_A Thermosome alpha subuni 100.0 5E-112 2E-116 920.1 55.6 515 11-531 9-528 (548)
7 1a6d_A Thermosome (alpha subun 100.0 3E-112 9E-117 921.4 50.7 525 11-545 8-539 (545)
8 3iyg_H T-complex protein 1 sub 100.0 3E-111 1E-115 907.1 57.8 504 15-528 1-514 (515)
9 3iyg_G T-complex protein 1 sub 100.0 4E-111 1E-115 907.1 58.3 505 18-528 2-514 (515)
10 3iyg_Q T-complex protein 1 sub 100.0 8E-111 3E-115 905.4 59.8 510 16-528 1-512 (512)
11 3iyg_B T-complex protein 1 sub 100.0 2E-110 6E-115 901.8 58.8 506 17-530 2-513 (513)
12 3p9d_G T-complex protein 1 sub 100.0 3E-112 1E-116 920.8 41.9 525 1-535 1-534 (550)
13 3iyg_D T-complex protein 1 sub 100.0 3E-110 1E-114 900.9 57.2 505 19-528 5-518 (518)
14 3p9d_A T-complex protein 1 sub 100.0 3E-110 9E-115 907.4 50.9 512 14-531 13-551 (559)
15 3iyg_Z T-complex protein 1 sub 100.0 4E-109 1E-113 891.2 56.1 497 22-527 7-516 (517)
16 3iyg_E T-complex protein 1 sub 100.0 8E-109 3E-113 890.4 58.1 505 19-527 4-514 (515)
17 3p9d_D T-complex protein 1 sub 100.0 9E-111 3E-115 906.2 42.7 511 13-528 7-528 (528)
18 3p9d_E T-complex protein 1 sub 100.0 4E-109 1E-113 898.7 49.1 508 19-530 39-560 (562)
19 3p9d_C T-complex protein 1 sub 100.0 1E-109 4E-114 902.3 44.0 515 10-530 4-588 (590)
20 3p9d_F T-complex protein 1 sub 100.0 1E-109 5E-114 901.2 37.9 518 13-534 5-543 (546)
21 3p9d_B T-complex protein 1 sub 100.0 2E-108 7E-113 889.6 37.6 510 12-531 4-521 (527)
22 3aq1_B Thermosome subunit; gro 100.0 8E-104 3E-108 847.6 42.5 486 54-546 1-497 (500)
23 1we3_A CPN60(groel); chaperoni 100.0 6.3E-94 2.2E-98 774.8 49.0 469 25-544 9-542 (543)
24 1kp8_A Groel protein; chaperon 100.0 6.3E-92 2.1E-96 758.0 47.3 455 25-532 9-527 (547)
25 1iok_A Chaperonin 60; chaperon 100.0 1.9E-92 6.3E-97 762.7 34.2 456 25-532 10-529 (545)
26 3rtk_A 60 kDa chaperonin 2; he 100.0 3.6E-92 1.2E-96 757.7 34.3 457 25-535 9-528 (546)
27 1gml_A T-complex protein 1 sub 100.0 4.7E-37 1.6E-41 285.1 17.8 171 214-385 1-174 (178)
28 1ass_A Thermosome; chaperonin, 100.0 2.3E-32 8E-37 248.4 13.7 151 220-370 1-153 (159)
29 3m6c_A 60 kDa chaperonin 1; ch 98.9 2.5E-08 8.6E-13 90.6 15.2 141 217-398 2-168 (194)
30 3osx_A 60 kDa chaperonin; alph 98.8 9.8E-08 3.4E-12 86.9 16.6 138 221-399 13-176 (201)
31 1srv_A Protein (groel (HSP60 c 98.8 3.6E-08 1.2E-12 85.4 11.4 109 222-354 1-134 (145)
32 1o13_A Probable NIFB protein; 62.5 14 0.00049 31.3 6.2 53 280-333 67-119 (136)
33 1eo1_A Hypothetical protein MT 62.4 19 0.00065 29.8 6.9 52 281-333 57-108 (124)
34 2yx6_A Hypothetical protein PH 61.9 16 0.00054 30.2 6.2 53 280-333 54-106 (121)
35 2wfb_A Putative uncharacterize 58.5 16 0.00056 30.0 5.7 52 280-332 58-110 (120)
36 1rdu_A Conserved hypothetical 51.9 23 0.00078 28.9 5.5 52 281-333 54-105 (116)
37 2re2_A Uncharacterized protein 48.0 32 0.0011 29.1 6.0 52 280-333 70-121 (136)
38 3v7e_A Ribosome-associated pro 40.2 47 0.0016 25.3 5.2 48 280-327 18-69 (82)
39 2qtd_A Uncharacterized protein 35.4 71 0.0024 25.3 5.9 48 283-332 50-97 (105)
40 2lbw_A H/ACA ribonucleoprotein 34.9 91 0.0031 25.7 6.6 48 280-327 27-79 (121)
41 2xzm_U Ribosomal protein L7AE 34.6 85 0.0029 26.2 6.4 49 280-328 31-84 (126)
42 3on1_A BH2414 protein; structu 31.2 90 0.0031 24.7 5.8 48 280-327 25-76 (101)
43 3psh_A Protein HI_1472; substr 30.6 72 0.0024 30.8 6.2 52 282-333 77-154 (326)
44 3md9_A Hemin-binding periplasm 30.5 1E+02 0.0036 28.3 7.1 52 282-333 52-111 (255)
45 2q8p_A Iron-regulated surface 30.5 52 0.0018 30.5 5.0 51 283-333 54-110 (260)
46 3v7q_A Probable ribosomal prot 30.3 1.2E+02 0.0041 24.0 6.4 47 280-326 26-76 (101)
47 2r7a_A Bacterial heme binding 28.6 1.2E+02 0.004 28.0 7.1 52 282-333 52-112 (256)
48 2r79_A Periplasmic binding pro 27.9 1.1E+02 0.0038 28.8 6.9 52 282-333 52-111 (283)
49 1n2z_A Vitamin B12 transport p 26.9 83 0.0028 28.9 5.7 52 282-333 50-108 (245)
50 2ale_A SNU13, NHP2/L7AE family 26.7 80 0.0027 26.6 4.9 48 279-326 38-90 (134)
51 2wi8_A Iron-uptake system-bind 26.2 1.1E+02 0.0038 29.2 6.7 51 283-333 90-144 (311)
52 4a18_G RPL30; ribosome, eukary 25.7 1.7E+02 0.0058 23.2 6.6 50 278-327 27-81 (104)
53 2etv_A Iron(III) ABC transport 24.0 93 0.0032 30.4 5.6 52 282-333 89-151 (346)
54 3tny_A YFIY (ABC transport sys 22.9 82 0.0028 30.0 4.9 51 283-333 90-144 (303)
55 4hn9_A Iron complex transport 22.8 1.3E+02 0.0045 29.1 6.5 51 282-333 109-165 (335)
56 3cpq_A 50S ribosomal protein L 22.5 2.1E+02 0.0072 22.9 6.6 50 278-327 26-80 (110)
57 1xbi_A 50S ribosomal protein L 21.6 1.4E+02 0.0047 24.5 5.3 49 280-328 36-89 (120)
58 3iz5_f 60S ribosomal protein L 21.2 1.7E+02 0.0056 23.8 5.6 50 278-327 31-85 (112)
59 2aif_A Ribosomal protein L7A; 21.0 1.4E+02 0.0049 25.0 5.4 50 278-327 46-100 (135)
60 3u5e_c L32, RP73, YL38, 60S ri 20.7 2E+02 0.0067 22.9 6.0 51 279-332 28-83 (105)
61 1vq8_F 50S ribosomal protein L 20.6 1.7E+02 0.0058 23.9 5.7 50 279-328 35-89 (120)
62 2fc3_A 50S ribosomal protein L 20.4 1.7E+02 0.0058 24.0 5.7 50 278-327 33-87 (124)
No 1
>3p9d_H T-complex protein 1 subunit theta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_h* 4d8q_H* 4d8r_h*
Probab=100.00 E-value=1.7e-120 Score=989.02 Aligned_cols=544 Identities=44% Similarity=0.753 Sum_probs=490.0
Q ss_pred CCCCCCCcccccccccccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccCh
Q 009026 1 MGFSMQPYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHP 80 (546)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP 80 (546)
|+|++|++++..+|++++++.+|.++++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||
T Consensus 1 ~~~~~~~~~~~~~l~~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP 80 (568)
T 3p9d_H 1 MSLRLPQNPNAGLFKQGYNSYSNADGQIIKSIAAIRELHQMCLTSMGPCGRNKIIVNHLGKIIITNDAATMLRELDIVHP 80 (568)
T ss_dssp ----CCCCCCCSSCCSSCCBCCCHHHHHHHHHHHHHHHHHHHHTTSSSSSCEEEEECTTSCEEEESCHHHHTTTCCCCCH
T ss_pred CCCCCCCcchhhhhhcCccccccHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCH
Confidence 89999999999999999999999778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHH
Q 009026 81 AAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEE 160 (546)
Q Consensus 81 ~a~ll~~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~ 160 (546)
+|||++++|++|++++||||||++||+++||+++.+++.+|+||..|++||+.|++.++++|++++.+... +..+++.
T Consensus 81 ~Akll~e~a~~qd~e~GDGTTtvvvLa~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~e~L~~~a~~v~~--~~~~~~~ 158 (568)
T 3p9d_H 81 AVKVLVMATEQQKIDMGDGTNLVMILAGELLNVSEKLISMGLSAVEIIQGYNMARKFTLKELDEMVVGEIT--DKNDKNE 158 (568)
T ss_dssp HHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCCSCCC--CCCTTHH
T ss_pred HHHHHHHHHHhhhceeCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccccCC--CCCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999886432 5678999
Q ss_pred HHHHHHhhhcccccCchhhHHHHHHHHHHHhcCC-----CCCcccccchhhhhcCCCCcccceeEeeEEEeccCCCCccc
Q 009026 161 VIYRMKAAVASKQFGQEEILCPLIADACIQVCPK-----NPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKN 235 (546)
Q Consensus 161 l~~i~~t~l~sk~~~~~~~ls~lv~~a~~~v~~~-----~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~~~~~~ 235 (546)
|.++++|+++||+.+++++|++++++|+.++.++ +..+||++.|+|++++||+++||++++|++|++++.+|+++
T Consensus 159 l~~va~tsl~sK~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~dl~~I~I~k~~Ggs~~dS~lv~G~v~dk~~~~m~~~ 238 (568)
T 3p9d_H 159 LLKMIKPVISSKKYGSEDILSELVSEAVSHVLPVAQQAGEIPYFNVDSIRVVKIMGGSLSNSTVIKGMVFNREPEGHVKS 238 (568)
T ss_dssp HHHHHHHHHTTTSTTCHHHHHHHHHHHHTTSCC---------CCCGGGCEEEEEESSCGGGCEEESSCCBSSCBSSGGGS
T ss_pred HHHHHHHHhhccCcchHHHHHHHHHHHHHHHhhccccccCCcccccceEEEEEccCCCcchheeeccEEEeecccCCcEE
Confidence 9999999999997665699999999999999763 33358899999999999999999999999999999999999
Q ss_pred cc---CceEEEEEeecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCe
Q 009026 236 ME---KAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKL 312 (546)
Q Consensus 236 i~---n~kI~ll~~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I 312 (546)
++ ||||++++|+|+++++++++++.+++++++..+.++|++++++++++|++.|++|||++++|++.+++||.++||
T Consensus 239 i~~~~n~kIlll~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~~al~~L~~~gI 318 (568)
T 3p9d_H 239 LSEDKKHKVAVFTCPLDIANTETKGTVLLHNAQEMLDFSKGEEKQIDAMMKEIADMGVECIVAGAGVGELALHYLNRYGI 318 (568)
T ss_dssp CCCCSSCEEEEECSCSSSCCCSSSCEEECCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEECSCCCHHHHHHHHHHTC
T ss_pred EecCCcceEEEEccCccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEECCCcChHHHHHHHHCCe
Confidence 99 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEecCHHHHHHHHHHhCCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEecCC-CCceEEEEEeCCCHHHHHHHH
Q 009026 313 MVLKISSKFELRRFCRTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGG-GNSVSTVVLRGSTDSILDDLE 391 (546)
Q Consensus 313 ~vv~~v~~~~l~~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~-~~~~~TIll~G~~~~~l~e~~ 391 (546)
++++++++.+|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|+. .+++|||+|||+|+.+++|.|
T Consensus 319 ~av~~v~~~~leria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~l~~~~~TIllrG~t~~~l~E~e 398 (568)
T 3p9d_H 319 LVLKVPSKFELRRLCRVCGATPLPRLGAPTPEELGLVETVKTMEIGGDRVTVFKQEQGEISRTSTIILRGATQNNLDDIE 398 (568)
T ss_dssp EEECCCCHHHHHHHHHHHSCCCCSSSSCCCGGGCEECSCCCCCEETTEECBCCCCCSSSCCSSCEEEEEESCHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHhCCEEEeccccCCHHHCCcceEEEEEEecCceEEEEecCCCCCCCeEEEEECCCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999962 378999999999999999999
Q ss_pred HHHHHHHHHHHHHhh--CCeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHH
Q 009026 392 RAVDDGVNTYKAMCR--DSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSL 469 (546)
Q Consensus 392 r~~~dal~~l~~~~~--~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l 469 (546)
|++||||+++|++++ ++++|||||++|++++.+|++++.+.++++|+++++||+|||.||++|++|||+|+.+++.+|
T Consensus 399 r~i~DAL~vvr~av~~~d~~iVpGGGa~E~~ls~~L~~~a~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l 478 (568)
T 3p9d_H 399 RAIDDGVAAVKGLMKPSGGKLLPGAGATEIELISRITKYGERTPGLLQLAIKQFAVAFEVVPRTLAETAGLDVNEVLPNL 478 (568)
T ss_dssp HHHHHHHHHHHHTTSTTCCCCCCTTTHHHHHHHHHHHHHHHTCCSTHHHHHHHHHHGGGHHHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCeEEeCCcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 999999999999999 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhc--------CCCceeEeccCCc---ccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCCCCCC
Q 009026 470 YAEHAS--------GKTKVGIDLENGV---CADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQ 538 (546)
Q Consensus 470 ~~~~~~--------~~~~~Gid~~~g~---i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~~~~~~~ 538 (546)
++.|.+ ++.++|||+.+|+ +.||++.|||||+.||+++|+.|+|+|++|||||++|..+|.++|++|++
T Consensus 479 ~~~h~~~~~~~~~~~~~~~G~d~~~g~~~~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~~~ 558 (568)
T 3p9d_H 479 YAAHNVTEPGAVKTDHLYKGVDIDGESDEGVKDIREENIYDMLATKKFAINVATEAATTVLSIDQIIMAKKAGGPRAPQG 558 (568)
T ss_dssp HHCCCCSSCCCCCCTTSSSCCCHHHHTCCCCHHHHHHHHHHHHHHHHHHHHCCEECBCCC--------------------
T ss_pred HHHhhhhcccccccCCCceeEcccCCCcccccChHHccCEEcHHHHHHHHHHHHHHHHHHHhHHHHhhccccCCCCCCCC
Confidence 999865 5568999999997 99999999999999999999999999999999999999999999998863
Q ss_pred C-CCCCCCC
Q 009026 539 P-GGGMDED 546 (546)
Q Consensus 539 ~-~~~~~~~ 546 (546)
| ++|||||
T Consensus 559 ~~~~~~~~~ 567 (568)
T 3p9d_H 559 PRPGNWDQE 567 (568)
T ss_dssp ---------
T ss_pred CCCCCCCCC
Confidence 3 3699997
No 2
>1a6d_B Thermosome (beta subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_B* 1e0r_B
Probab=100.00 E-value=2.8e-114 Score=937.53 Aligned_cols=528 Identities=28% Similarity=0.491 Sum_probs=480.2
Q ss_pred ccccccccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHH
Q 009026 11 QSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGK 90 (546)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~ 90 (546)
..+++++.+..+| ++++.+|+.||.+|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 7 ~~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~Akll~e~a~ 85 (543)
T 1a6d_B 7 IFILKEGTKRESG-KDAMKENIEAAIAISNSVRSSLGPRGMDKMLVDSLGDIVITNDGVTILKEMDVEHPAAKMMVEVSK 85 (543)
T ss_dssp --------------CHHHHHHHHHHHHHHHHHHTTSSTTCCCEEEECTTCCEEEECCHHHHHHHSCCCSHHHHHHHHHHT
T ss_pred hhhcCCcchhhhh-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHhhccchHHHHHHHHHH
Confidence 4578899888888 599999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhc
Q 009026 91 AQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVA 170 (546)
Q Consensus 91 ~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~ 170 (546)
+|++++||||||+++||++||+++.+++.+|+||+.|++||++|++.++++|++++.+ ++..|++.|.++++|+++
T Consensus 86 ~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~a~~----v~~~~~~~l~~va~tsl~ 161 (543)
T 1a6d_B 86 TQDSFVGDGTTTAVIIAGGLLQQAQGLINQNVHPTVISEGYRMASEEAKRVIDEISTK----IGADEKALLLKMAQTSLN 161 (543)
T ss_dssp CTTCCCTTHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEE----CCTTHHHHHHHHHHHHHT
T ss_pred hcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999886 244568999999999999
Q ss_pred cccc-CchhhHHHHHHHHHHHhcCC--CCCcccccchhhhhcCCCCcccceeEeeEEEeccCC--CCcccccCceEEEEE
Q 009026 171 SKQF-GQEEILCPLIADACIQVCPK--NPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFA 245 (546)
Q Consensus 171 sk~~-~~~~~ls~lv~~a~~~v~~~--~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~--~~~~~i~n~kI~ll~ 245 (546)
||+. +++++|++++++|+.+++++ +..++|+++|+|++++||+++||++++|++|++++. +||++++||||++++
T Consensus 162 sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~ 241 (543)
T 1a6d_B 162 SKSASVAKDKLAEISYEAVKSVAELRDGKYYVDFDNIQVVKKQGGAIDDTQLINGIIVDKEKVHPGMPDVVKDAKIALLD 241 (543)
T ss_dssp TSGGGGGHHHHHHHHHHHHHHHEEECSSSEEECGGGEEEEEEESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEES
T ss_pred cccccccHHHHHHHHHHHHHHhcccccCCcccccceEEEEEecCCCccceeEEccEEEecCCCCCCCcceecCCeEEEEe
Confidence 9964 57899999999999999865 333588899999999999999999999999999985 689999999999999
Q ss_pred eecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHH
Q 009026 246 GGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRR 325 (546)
Q Consensus 246 ~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ 325 (546)
++|++++++.++++.+++++++..+.++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+|
T Consensus 242 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~v~k~~le~ 321 (543)
T 1a6d_B 242 APLEIKKPEFDTNLRIEDPSMIQKFLAQEENMLREMVDKIKSVGANVVITQKGIDDMAQHYLSRAGIYAVRRVKKSDMDK 321 (543)
T ss_dssp SCBSCCCCSSEEEECCCSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHH
T ss_pred cccccccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEECCCcCHHHHHHHHHCCeeEeccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHh
Q 009026 326 FCRTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMC 405 (546)
Q Consensus 326 ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~ 405 (546)
||++|||++++++++++++++|+|+.|++.++|+++|++|++|+ .+++|||+|||+|+.+++|.||+++||++++|+++
T Consensus 322 ia~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~-~~~~~TI~lrG~t~~~l~E~er~l~DAl~~~r~a~ 400 (543)
T 1a6d_B 322 LAKATGASIVSTIDEISSSDLGTAERVEQVKVGEDYMTFVTGCK-NPKAVSILVRGETEHVVDEMERSITDSLHVVASAL 400 (543)
T ss_dssp HHHHHTCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEEEES-SSSCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCceecccccCCHHHCCCceEEEEEEecCceEEEEecCC-CCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997 48999999999999999999999999999999999
Q ss_pred hCCeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEecc
Q 009026 406 RDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLE 485 (546)
Q Consensus 406 ~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~~ 485 (546)
++|++|||||++|++++.+|++++...++++|+++++||+||+.||++|++|||+|+.+++.+|++.|..++.++|+|+.
T Consensus 401 ~~~~ivpGGGa~e~~~s~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~ 480 (543)
T 1a6d_B 401 EDGAYAAGGGATAAEIAFRLRSYAQKIGGRQQLAIEKFADAIEEIPRALAENAGLDPIDILLKLRAEHAKGNKTYGINVF 480 (543)
T ss_dssp HHCEEEETTTHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHTHHHHHHHHHHTCCHHHHHHHHHHHHHTTCTTEEEETT
T ss_pred HCCCccCCccHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHhCCCCCeeEeCC
Confidence 99999999999999999999999988899999999999999999999999999999999999999999877778999999
Q ss_pred CCcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCCCCCCCCCCCCC
Q 009026 486 NGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQPGGGMDE 545 (546)
Q Consensus 486 ~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~~~~~~~~~~~~~~ 545 (546)
+|++.||.+.|||||+.||+++|+.|+|+|++|||||++|..+|..+|++|.+ .++|||
T Consensus 481 ~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~~~~~~~~-~~~~~~ 539 (543)
T 1a6d_B 481 TGEIEDMVKNGVIEPIRVGKQAIESATEAAIMILRIDDVIATKSSSSSSNPPK-SGSSSE 539 (543)
T ss_dssp TTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHEEEEEC-------------------
T ss_pred CCcccchhhcCceecHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCCCCCC-CCCccc
Confidence 99999999999999999999999999999999999999999999888877666 499997
No 3
>3ruv_A Chaperonin, CPN; double-ring, protein folding machinery, group II chaperonin, binding, chaperone; HET: ANP; 2.24A {Methanococcus maripaludis} PDB: 3rus_A* 3ruw_A* 3ruq_A* 3los_A 3kfb_A* 3izi_A 3izj_A 3izm_A 3izh_A 3kfe_A* 3iyf_A* 3kfk_A* 3izk_A 3izl_A 3j03_A 3izn_A 3j02_A
Probab=100.00 E-value=8.6e-113 Score=924.89 Aligned_cols=516 Identities=29% Similarity=0.514 Sum_probs=491.5
Q ss_pred cccccccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHHH
Q 009026 12 SMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKA 91 (546)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~ 91 (546)
.+|+++.++.+| .+++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++
T Consensus 6 ~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~ 84 (543)
T 3ruv_A 6 GVLPENMKRYMG-RDAQRMNILAGRIIAETVRSTLGPKGMDKMLVDDLGDVVVTNDGVTILREMSVEHPAAKMLIEVAKT 84 (543)
T ss_dssp CSSCSSEEEEET-HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTSCEEEECCHHHHHHHSCCCCHHHHHHHHHHHH
T ss_pred eeecCCcchhcc-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHH
Confidence 778999999888 5999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhcc
Q 009026 92 QQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVAS 171 (546)
Q Consensus 92 ~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~s 171 (546)
|++++||||||++|||++||+++.+|+.+|+||..|++||+.|++.++++|++++++ ++..|++.|.++++|+++|
T Consensus 85 qd~e~GDGTTtvvVLA~~Ll~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~----v~~~d~~~L~~va~tsl~s 160 (543)
T 3ruv_A 85 QEKEVGDGTTTAVVVAGELLRKAEELLDQNVHPTIVVKGYQAAAQKAQELLKTIACE----VGAQDKEILTKIAMTSITG 160 (543)
T ss_dssp HHHHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHCEE----CCTTCHHHHHHHHHHHHHH
T ss_pred HHhhhCCCcccHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHhhCC----CCCCCHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999999999999886 3556899999999999999
Q ss_pred ccc-CchhhHHHHHHHHHHHhcCC-CCCcccccchhhhhcCCCCcccceeEeeEEEeccCC--CCcccccCceEEEEEee
Q 009026 172 KQF-GQEEILCPLIADACIQVCPK-NPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFAGG 247 (546)
Q Consensus 172 k~~-~~~~~ls~lv~~a~~~v~~~-~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~--~~~~~i~n~kI~ll~~~ 247 (546)
|+. .++++|++++++|+.+++++ + .||+++|+|+++.||++.||++++|++|++++. +|+++++||||++++++
T Consensus 161 K~~~~~~~~i~~livdAv~~V~~~~g--~~dl~~I~V~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~~n~kIll~~~~ 238 (543)
T 3ruv_A 161 KGAEKAKEKLAEIIVEAVSAVVDDEG--KVDKDLIKIEKKSGASIDDTELIKGVLVDKERVSAQMPKKVTDAKIALLNCA 238 (543)
T ss_dssp TCGGGCCHHHHHHHHHHHHHHCCTTS--CCCGGGEEEEEEECSCGGGCEEESSEEESCCCSCTTSCSEEEEEEEEEESSC
T ss_pred cccchhHHHHHHHHHHHHHHhhccCC--CcccceEEEEEcCCCCcccceeecceEEeccccCccccccccCcEEEEEccc
Confidence 964 56899999999999999876 4 389999999999999999999999999999984 68999999999999999
Q ss_pred cccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHH
Q 009026 248 VDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFC 327 (546)
Q Consensus 248 l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia 327 (546)
|++++++.++++.+++++++..+.++|++++++++++|++.|+||||++++|++.+++||.++||++++++++++|+|||
T Consensus 239 Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~ve~I~~~g~~vvi~~~~I~~~al~~L~~~gI~~v~~v~k~~le~ia 318 (543)
T 3ruv_A 239 IEIKETETDAEIRITDPAKLMEFIEQEEKMLKDMVAEIKASGANVLFCQKGIDDLAQHYLAKEGIVAARRVKKSDMEKLA 318 (543)
T ss_dssp BSCCCCSSCCCEEECSTTHHHHHHHHHHHHHHHHHHHHHHHTCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHH
T ss_pred ccccccccCceeEeCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCCccHHHHHHHHHcCcEEEeeCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhC
Q 009026 328 RTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRD 407 (546)
Q Consensus 328 ~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~~~ 407 (546)
++|||++++++++++++++|+|+.|++.++|+++|++|++|+ .+..|||+|||+|+.+++|.||+++||++++|+++++
T Consensus 319 ~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~-~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~av~~ 397 (543)
T 3ruv_A 319 KATGANVIAAIAALSAQDLGDAGLVEERKISGDSMIFVEECK-HPKAVTMLIRGTTEHVIEEVARAVDDAVGVVGCTIED 397 (543)
T ss_dssp HHHCCCEESCGGGCCGGGCEEEEEEEEEEETTEEEEEEECCS-SCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCceecccccCCHHHCCcccEEEEEEeCCceEEEEECCC-CCceeEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999997 4889999999999999999999999999999999999
Q ss_pred CeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHh-cCCCceeEeccC
Q 009026 408 SRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHA-SGKTKVGIDLEN 486 (546)
Q Consensus 408 ~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~-~~~~~~Gid~~~ 486 (546)
|++|||||++|++++.+|++++.+.++++|+++++||+|||.||++|++|||+|+.+++.+|++.|. +++.++|||+.+
T Consensus 398 g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~ 477 (543)
T 3ruv_A 398 GRIVSGGGSTEVELSMKLREYAEGISGREQLAVRAFADALEVIPRTLAENAGLDAIEILVKVRAAHASNGNKCAGLNVFT 477 (543)
T ss_dssp CEEEETTTHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHHHHHHTTTCCTTEEECTTT
T ss_pred CCeecCCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCceeeeeCCC
Confidence 9999999999999999999999889999999999999999999999999999999999999999997 666789999999
Q ss_pred CcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCCC
Q 009026 487 GVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRR 535 (546)
Q Consensus 487 g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~~~~ 535 (546)
|++.||++.|||||+.||+++|+.|+|+|++|||||++|..+|.++|..
T Consensus 478 g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~~ 526 (543)
T 3ruv_A 478 GAVEDMCENGVVEPLRVKTQAIQSAAESTEMLLRIDDVIAAEKLRGAPD 526 (543)
T ss_dssp CSEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEEEC-------
T ss_pred CccccHHHcCCEecHHHHHHHHHHHHHHHHHHHhHHhheecCccCCCCC
Confidence 9999999999999999999999999999999999999999999877643
No 4
>3ko1_A Chaperonin; 9-fold symmetry, double ring, ATP hydrolase, chaperone, NUCL binding; HET: ADP; 3.70A {Acidianus tengchongensis}
Probab=100.00 E-value=1.5e-113 Score=930.72 Aligned_cols=527 Identities=29% Similarity=0.519 Sum_probs=481.5
Q ss_pred cccccccccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHH
Q 009026 10 IQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAG 89 (546)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~ 89 (546)
...+++++.++.+| .+++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|
T Consensus 15 ~~~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a 93 (553)
T 3ko1_A 15 PVIILKEGSSRTYG-KEAVRANIAAVKAVEEALKSTYGPRGMDKMLVDSLGDITITNDGATILDKMDLQHPAAKLLVQIA 93 (553)
T ss_dssp -------------C-HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEEECTTSCEEEECCHHHHHHSSCCCSHHHHHHHHHH
T ss_pred eEEEEecCcccchh-HHHHHHHHHHHHHHHHHHHhccCCcchhhHHHhhccceEEecCccchhhhhhccChhHHHHHHHh
Confidence 45668999999888 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhh
Q 009026 90 KAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAV 169 (546)
Q Consensus 90 ~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l 169 (546)
++|++++||||||++||+++||+++.+|+++|+||..|++||++|++.++++|++++++ ++..|++.|.++++|++
T Consensus 94 ~~qd~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~----v~~~d~e~L~~vA~tsl 169 (553)
T 3ko1_A 94 KGQDEETADGTKTAVIFSGELVKKAEDLLYKDVHPTIIISGYKKAEEVALQTIQELAQT----VSINDTDLLRKIAMTSL 169 (553)
T ss_dssp HTCSSSSSTTHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCEE----CCTTCHHHHHHHHHHHH
T ss_pred hCCcccccCCceeEEEehHHHHHhHHHHHhcCCCceEEehhhhHHHHHHHHHHHHhcCC----CCCCcHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999886 35568999999999999
Q ss_pred cccc-cCchhhHHHHHHHHHHHhcCC--CCCcccccchhhhhcCCCCcccceeEeeEEEeccCC--CCcccccCceEEEE
Q 009026 170 ASKQ-FGQEEILCPLIADACIQVCPK--NPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVF 244 (546)
Q Consensus 170 ~sk~-~~~~~~ls~lv~~a~~~v~~~--~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~--~~~~~i~n~kI~ll 244 (546)
+||+ ..++++|++++++|+.+++++ +...||+++|+|+++.||++.||++++|++|++++. +|+++++||||+++
T Consensus 170 ~sK~~~~~~~~i~~livdAv~~V~~~~~G~~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~ 249 (553)
T 3ko1_A 170 SSKAVAGAREYIADIVVKAVTQVAELRGDKWYVDLDNIQIVKKAGGSINDTQLVYGIVVDKEVVHPGMPKRLENAKIALI 249 (553)
T ss_dssp TTSSCCTTHHHHHHHHHHHHHHHCCCTTSSCCCCGGGEEEEECCCSCGGGCEEESEEEECSCBSCTTSCSCCBSCEEEEE
T ss_pred hHHhhhhHHHHHHHHHHHHHHHHHHhcCCceEEechhHHHHHHhCCccccceeeEEEEecccccCCCCccccccceEEEe
Confidence 9996 456899999999999999875 334589999999999999999999999999999984 68999999999999
Q ss_pred EeecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHH
Q 009026 245 AGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELR 324 (546)
Q Consensus 245 ~~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~ 324 (546)
+++|++++++.++++.+++++++..+.++|++++++++++|.+.|+||||++++|++.+++||.++||++++++++++|+
T Consensus 250 d~~Le~~k~e~~~~v~Iss~~~l~~~~~~E~~~l~~~vekI~~~g~~vvI~~~~I~~~al~~L~~~gI~~v~~v~k~~le 329 (553)
T 3ko1_A 250 DASLEVEKPELDAEIRINDPTQMQKFLDEEENLIKEKVDKILATGANVIICQKGIDEVAQSYLAKKGVLAVRRAKKSDLE 329 (553)
T ss_dssp CSCBSCCCCTTTCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCCSEEECSSCBCSHHHHHHHHHTCEEECCCCHHHHH
T ss_pred cCcccccCcccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhcceEEEeccChHHHHHHHHHhcchhhhhhhhhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Q 009026 325 RFCRTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAM 404 (546)
Q Consensus 325 ~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~ 404 (546)
|||++|||++++++++++++++|+|+.|++.++|+++|++|++|+ .+..|||+|||+|+.+++|.||+++|||+++|++
T Consensus 330 ria~~tGa~ivs~l~~l~~~~LG~a~~v~~~~ig~d~~~~i~g~~-~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a 408 (553)
T 3ko1_A 330 KLARATGGRVVSNIDEISEQDLGYASLIEERKVGEDKMVFVEGAK-NPKSISILIRGGLERLVDETERALRDALGTVADV 408 (553)
T ss_dssp HHHTTTTCCEESCGGGCCSSSSEECSEEECCCCSSSCCEEEESCS-SSSCEEEEECCSSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCeeecccccCChhhcchHHHHHHhhcCcceEEEeccCC-CCceEEEeeeccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999997 4889999999999999999999999999999999
Q ss_pred hhCCeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCC-CceeEe
Q 009026 405 CRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGK-TKVGID 483 (546)
Q Consensus 405 ~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~-~~~Gid 483 (546)
+++|++|||||++|++++.+|++++...++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+++ .++|||
T Consensus 409 v~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d 488 (553)
T 3ko1_A 409 IKDGRAIAGGGAVEIEIAKKLRKYAPQVGGKEQLAVEAYANALESLVSILIENAGFDPIDLLMKLRSTHENENNKWYGID 488 (553)
T ss_dssp HHHCEEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHTTCSGGGTTEEEE
T ss_pred hhcCceecCCceeEeHHHHHHHHhccccCChhHhHHHHHHHHHHhHHHHHHHhcCCCHHHHHHHHHHHhhCcCCceEeEE
Confidence 9999999999999999999999999888999999999999999999999999999999999999999987765 789999
Q ss_pred ccCCcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCCCCCCCCCCCC
Q 009026 484 LENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRRDQQPGGGMD 544 (546)
Q Consensus 484 ~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~~~~~~~~~~~~~ 544 (546)
+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|..+|..+|.++.+ +.|.
T Consensus 489 ~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~~~~~~~~~--~~~~ 547 (553)
T 3ko1_A 489 LYAGQPVDMWQKGVIEPALVKMNAIKAATEAATLVLRIDDVVSAGKKSGGESKTP--GGAN 547 (553)
T ss_dssp TTTTEEEESGGGSCEEETTHHHHHHHHHHHHHHHHHHEEEECCC-----------------
T ss_pred eecCCchHHHHhCccchhhhhhhhhhhcchhheEEEehHHHHHhhhhccCCCCCC--Cccc
Confidence 9999999999999999999999999999999999999999999999988865552 4553
No 5
>3iyg_A T-complex protein 1 subunit alpha; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.9e-112 Score=918.06 Aligned_cols=506 Identities=28% Similarity=0.473 Sum_probs=480.6
Q ss_pred cccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHHHhhhhhC
Q 009026 18 HKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIG 97 (546)
Q Consensus 18 ~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~G 97 (546)
.++.+| .+++.+|+.||+.|+++++|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++|
T Consensus 3 ~~~~~g-~~a~~~ni~a~~~la~~v~ttlGP~G~~kml~~~~g~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~e~G 81 (529)
T 3iyg_A 3 GDRSTG-EAIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVG 81 (529)
T ss_pred cchhch-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCChHHHHHHHHHHHhhhhhC
Confidence 345567 5999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHh-hhhccCCCCCCCCHHHHHHHHHhhhcccc-cC
Q 009026 98 DGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEE-LVEEGSENMDVRNTEEVIYRMKAAVASKQ-FG 175 (546)
Q Consensus 98 DGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~~~~~~~~~~~~~~~~l~~i~~t~l~sk~-~~ 175 (546)
|||||++|||++||+++.+|+++|+||..|++||+.|++.++++|++ ++.+ ++..|++.|.++++|+++||+ .+
T Consensus 82 DGTTtvvvLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~----v~~~~~e~l~~va~tsl~sK~~~~ 157 (529)
T 3iyg_A 82 DGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYISENLIIN----TDELGRDCLINAAKTSMSSKVIGI 157 (529)
T ss_pred CChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccC----CCCCCHHHHHHHHHHHhccCcccc
Confidence 99999999999999999999999999999999999999999999998 8775 245579999999999999996 45
Q ss_pred chhhHHHHHHHHHHHhcC---CCCCcccccchhhhhcCCCCcccceeEeeEEEeccC--CCCcccccCceEEEEEeeccc
Q 009026 176 QEEILCPLIADACIQVCP---KNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDA--VGSIKNMEKAKVAVFAGGVDT 250 (546)
Q Consensus 176 ~~~~ls~lv~~a~~~v~~---~~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~--~~~~~~i~n~kI~ll~~~l~~ 250 (546)
++++|++++++|+.++++ ++..+||+++|+|+++.||++.||++++|++|++++ .+||++++||||++++++|++
T Consensus 158 ~~~~i~~livdAv~~V~~~~~~g~~~~dv~~I~I~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIlll~~~le~ 237 (529)
T 3iyg_A 158 NGDFFANLVVDAVLAIKYTDIRGQPRYPVNSINVLKAHGRSQMESMLINGYALNCVVGSQGMPKRIVNAKIACLDFSLQK 237 (529)
T ss_pred cHHHHHHHHHHHHHHHhhhccCCCcccccceEEEEEecCCCccceEEEeeeEEecCcccccCCcccCCceEEEecCCccc
Confidence 789999999999999973 343468888999999999999999999999999987 479999999999999999999
Q ss_pred ccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHh
Q 009026 251 SATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTT 330 (546)
Q Consensus 251 ~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~t 330 (546)
++++.++++.+++++++..+.++|++++++++++|++.|+||||++++|++.+++||.++||++++++++++|+|||++|
T Consensus 238 ~k~e~~~~v~i~~~~~~~~i~~~E~~~l~~~v~kI~~~g~nvvi~~~~I~d~al~~L~~~gI~av~~v~k~~leria~~t 317 (529)
T 3iyg_A 238 TKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKAS 317 (529)
T ss_pred ccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCceeccCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeccccCCCC------CCCcccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Q 009026 331 GAVAMLKLCQPN------PDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAM 404 (546)
Q Consensus 331 Ga~ii~~l~~l~------~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~ 404 (546)
||++++++++++ ++++|+|+.|++.++|+++|++|++|+ .+++|||+|||+|+.+++|.||++|||++++|++
T Consensus 318 Ga~iv~~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~-~~~~~TI~lrG~t~~~l~E~er~l~Dal~v~r~~ 396 (529)
T 3iyg_A 318 GATVLSTLANLEGEETFEASMLGQAEEVVQERICDDELILIKNTK-ARTSASVILRGANDFMCDEMERSLHDALCVVKRV 396 (529)
T ss_pred CCeeecchhcccchhccChhhCccceEEEEEEeCCceEEEEEcCC-CCceEEEEECCchHHHHHHHHHHHHHHHHHHHHH
Confidence 999999987764 577999999999999999999999997 4889999999999999999999999999999999
Q ss_pred hhCCeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCC-------
Q 009026 405 CRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGK------- 477 (546)
Q Consensus 405 ~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~------- 477 (546)
+++|++||||||+|++++.+|++++.+.++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+++
T Consensus 397 v~~~~iVpGGGa~E~~ls~~L~~~~~~~~g~eq~~i~~fa~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~~~~ 476 (529)
T 3iyg_A 397 LESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKN 476 (529)
T ss_pred hhCCeEEeCCcHHHHHHHHHHHHHhhhcCChHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999997765
Q ss_pred -CceeEeccCCcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcCC
Q 009026 478 -TKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKP 529 (546)
Q Consensus 478 -~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~ 529 (546)
.++|+|+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|
T Consensus 477 ~~~~G~d~~~g~~~d~~~~gV~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~ 529 (529)
T 3iyg_A 477 LKWIGLDLVNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHP 529 (529)
T ss_pred CceeeeeCCCCCccChhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhcCCC
Confidence 6899999999999999999999999999999999999999999999998743
No 6
>1q3q_A Thermosome alpha subunit; chaperone, chaperonin; HET: ANP; 2.30A {Thermococcus SP} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1q2v_A* 1q3s_A* 1q3r_A
Probab=100.00 E-value=4.7e-112 Score=920.07 Aligned_cols=515 Identities=33% Similarity=0.567 Sum_probs=492.5
Q ss_pred ccccccccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHH
Q 009026 11 QSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGK 90 (546)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~ 90 (546)
..+++++.+..+| ++++.+|+.||++|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|||++++|+
T Consensus 9 ~~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~ 87 (548)
T 1q3q_A 9 VVILPEGTQRYVG-RDAQRLNILAARIIAETVRTTLGPKGMDKMLVDSLGDIVVTNDCATILDKIDLQHPAAKMMVEVAK 87 (548)
T ss_dssp CCCSCTTCEEEEH-HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECTTCCEEEESCHHHHHHHSCCCSHHHHHHHHHHH
T ss_pred cccccCCcceech-HHHHHHHHHHHHHHHHHHHhccCCCCceEEEEcCCCCeEEECCHHHHHHHhhccchHHHHHHHHHH
Confidence 4578999888777 699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhc
Q 009026 91 AQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVA 170 (546)
Q Consensus 91 ~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~ 170 (546)
+|++++||||||+++|+++||+++.+++++|+||+.|++||+.|++.++++|++++.+ ++..|++.|.++++|+++
T Consensus 88 ~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~----v~~~d~~~l~~va~tsl~ 163 (548)
T 1q3q_A 88 TQDKEAGDGTTTAVVIAGELLRKAEELLDQNIHPSIITKGYALAAEKAQEILDEIAIR----VDPDDEETLLKIAATSIT 163 (548)
T ss_dssp HHHHHTSSCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCEE----CCTTCHHHHHHHHHHHSC
T ss_pred hcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999886 245679999999999999
Q ss_pred cccc-CchhhHHHHHHHHHHHhcCC--CCCcccccchhhhhcCCCCcccceeEeeEEEeccCC--CCcccccCceEEEEE
Q 009026 171 SKQF-GQEEILCPLIADACIQVCPK--NPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFA 245 (546)
Q Consensus 171 sk~~-~~~~~ls~lv~~a~~~v~~~--~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~--~~~~~i~n~kI~ll~ 245 (546)
||+. +++++|++++++|+.+++++ +..++|++.|+|++++||+++||++++|++|++++. +||++++||||++++
T Consensus 164 sKi~~~~~~~i~~livdAv~~V~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~ 243 (548)
T 1q3q_A 164 GKNAESHKELLAKLAVEAVKQVAEKKDGKYVVDLDNIKFEKKAGEGVEESELVRGVVIDKEVVHPRMPKRVENAKIALIN 243 (548)
T ss_dssp SSTTGGGHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEEEEBSCGGGCEEESSEEESCCCSSTTSCSEESSEEEEEEC
T ss_pred ccccccchHHHHHHHHHHHHHhccccCCCccccCCeEEEEEecCCCccceEEEeeEEEeccCCCCCCcceecCCEEEEEe
Confidence 9964 57899999999999999865 323588889999999999999999999999999985 689999999999999
Q ss_pred eecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHH
Q 009026 246 GGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRR 325 (546)
Q Consensus 246 ~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ 325 (546)
++|++++++.++++.++++++++.+.++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+|
T Consensus 244 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ 323 (548)
T 1q3q_A 244 EALEVKKTETDAKINITSPDQLMSFLEQEEKMLKDMVDHIAQTGANVVFVQKGIDDLAQHYLAKYGIMAVRRVKKSDMEK 323 (548)
T ss_dssp SCBSCCCCSSCCCEEECSHHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHH
T ss_pred cCcCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCcCEEEEcCCcCHHHHHHHHHCCcEEEccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHh
Q 009026 326 FCRTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMC 405 (546)
Q Consensus 326 ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~ 405 (546)
||++|||++++++++++++++|+|+.|++.++|+++|++|++|+ .+++|||+|||+|+.+++|.||+++||++++|+++
T Consensus 324 ia~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~-~~~~~TI~lrG~te~~l~E~er~l~DAl~~~r~a~ 402 (548)
T 1q3q_A 324 LAKATGAKIVTNVKDLTPEDLGYAEVVEERKLAGENMIFVEGCK-NPKAVTILIRGGTEHVIDEVERALEDAVKVVKDVM 402 (548)
T ss_dssp HHHHHCCCCBSSGGGCCGGGCEEESEEEEEEETTEEEEEEECCS-SCSSEEEEEEESSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCeEecccccCCHHHCCCceEEEEEEecCceEEEEecCC-CCCeEEEEECCCChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997 48999999999999999999999999999999999
Q ss_pred hCCeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEecc
Q 009026 406 RDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLE 485 (546)
Q Consensus 406 ~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~~ 485 (546)
++|++|||||++|++++.+|++++.+.++++|+++++||+||+.||++|++|||+|+.+++.+|++.|.+++.++|+|..
T Consensus 403 ~~~~ivpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~ 482 (548)
T 1q3q_A 403 EDGAVLPAGGAPEIELAIRLDEYAKQVGGKEALAIENFADALKIIPKTLAENAGLDTVEMLVKVISEHKNRGLGIGIDVF 482 (548)
T ss_dssp HSCEEEECTTHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHTTHHHHHHHHHTTCCHHHHHHHHHHHHHHHCTTEEEETT
T ss_pred HCCCcccCCcHHHHHHHHHHHHHhhhcCCcHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceeCC
Confidence 99999999999999999999999988889999999999999999999999999999999999999999766678999999
Q ss_pred CCcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCC
Q 009026 486 NGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAG 531 (546)
Q Consensus 486 ~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~ 531 (546)
+|++.||++.|||||+.||+++|+.|+|+|++|||||++|..+|..
T Consensus 483 ~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~~~~~ 528 (548)
T 1q3q_A 483 EGKPADMLEKGIIEPLRVKKQAIKSASEAAIMILRIDDVIAAKATK 528 (548)
T ss_dssp TTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHTCCEEEECCC--
T ss_pred CCCccchhhcCCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcC
Confidence 9999999999999999999999999999999999999999998764
No 7
>1a6d_A Thermosome (alpha subunit); group II chaperonin, CCT, TRIC, PR folding, ATPase, chaperonin; 2.60A {Thermoplasma acidophilum} SCOP: a.129.1.2 c.8.5.2 d.56.1.2 PDB: 1a6e_A*
Probab=100.00 E-value=2.7e-112 Score=921.41 Aligned_cols=525 Identities=29% Similarity=0.525 Sum_probs=481.2
Q ss_pred ccccccccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHH
Q 009026 11 QSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGK 90 (546)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~ 90 (546)
..+++++.+..+| ++++.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 8 ~~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~ 86 (545)
T 1a6d_A 8 ILVLKEGTQREQG-KNAQRNNIEAAKAIADAVRTTLGPKGMDKMLVDSIGDIIISNDGATILKEMDVEHPTAKMIVEVSK 86 (545)
T ss_dssp ---------CEEH-HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEEECSSSCEEEECCHHHHHHHSCCCSHHHHHHHGGGG
T ss_pred ccccCCcchhhch-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCcHHHHHHhhhccchHHHHHHHHHH
Confidence 4578999888777 699999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhc
Q 009026 91 AQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVA 170 (546)
Q Consensus 91 ~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~ 170 (546)
+|++++||||||+++||++||+++.+++++|+||+.|++||+.|++.++++|++++.+ + .|++.|.++++|+++
T Consensus 87 ~qd~e~GDGTTtvvvLA~~LL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~-----~-~~~~~l~~va~tsl~ 160 (545)
T 1a6d_A 87 AQDTAVGDGTTTAVVLSGELLKQAETLLDQGVHPTVISNGYRLAVNEARKIIDEIAEK-----S-TDDATLRKIALTALS 160 (545)
T ss_dssp CTTTCSTTHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHCEE-----C-CCHHHHHHHHHHHTT
T ss_pred hcCCEECCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcCC-----C-CCHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999999999875 3 478999999999999
Q ss_pred cccc-CchhhHHHHHHHHHHHhcCC--CCCcccccchhhhhcCCCCcccceeEeeEEEeccCC--CCcccccCceEEEEE
Q 009026 171 SKQF-GQEEILCPLIADACIQVCPK--NPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFA 245 (546)
Q Consensus 171 sk~~-~~~~~ls~lv~~a~~~v~~~--~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~--~~~~~i~n~kI~ll~ 245 (546)
||+. +++++|++++++|+.+++++ +..+||++.|+|++++|++++||++++|++|++++. +||++++||||++++
T Consensus 161 sKi~~~~~~~i~~livdAv~~v~~~~~g~~~~d~~~I~V~k~~G~~~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~ 240 (545)
T 1a6d_A 161 GKNTGLSNDFLADLVVKAVNAVAEVRDGKTIVDTANIKVDKKNGGSVNDTQFISGIVIDKEKVHSKMPDVVKNAKIALID 240 (545)
T ss_dssp TSSCCSTHHHHHHHHHHHHHHHCEESSSSEECCGGGEEEEECCCSCSTTCEEESEEEESCCCSCTTSCSEEEEEEEEEEC
T ss_pred cccccccHHHHHHHHHHHHHHHhcccCCCcccccceEEEEEecCCCceeeEEEeeEEEeccCCCCCCcceecCCEEEEEe
Confidence 9964 57899999999999999764 223588889999999999999999999999999985 689999999999999
Q ss_pred eecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHH
Q 009026 246 GGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRR 325 (546)
Q Consensus 246 ~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ 325 (546)
++|++++++.++++.++++++++.+.++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++++|+|
T Consensus 241 ~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ 320 (545)
T 1a6d_A 241 SALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEK 320 (545)
T ss_dssp SCBSCCCCSSCCEEEECSTTHHHHHHHHHHHHHHHHHHHHHHTTCCEEEESSCBCHHHHHHHHHHTCEEECSCCHHHHHH
T ss_pred cCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeeEeccCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhCCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHh
Q 009026 326 FCRTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMC 405 (546)
Q Consensus 326 ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~ 405 (546)
||++|||++++++++++++++|+|+.|++.++|+++|++|++|+ .+++|||+|||+|+.+++|.||+++||++++|+++
T Consensus 321 ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~-~~~~~TI~lrG~te~~l~E~kr~l~DAl~~~r~a~ 399 (545)
T 1a6d_A 321 LAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCK-NPKAVSILIRGGTDHVVSEVERALNDAIRVVAITK 399 (545)
T ss_dssp HHHHHCCCEESSGGGCCGGGCEEEEEEEEEEETTEEEEEEEEES-CSSCEEEEECCSSSTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCeeecccccCCHHHCCCceEEEEEEecCceEEEEecCC-CCceEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997 48999999999999999999999999999999999
Q ss_pred hCCeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEecc
Q 009026 406 RDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLE 485 (546)
Q Consensus 406 ~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~~ 485 (546)
++|++|||||++|++++.+|++++.+.++++|+++++||+||+.||++|++|||+|+.+++.+|++.|..++.++|+|+.
T Consensus 400 ~~g~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~ 479 (545)
T 1a6d_A 400 EDGKFLWGGGAVEAELAMRLAKYANSVGGREQLAIEAFAKALEIIPRTLAENAGIDPINTLIKLKADDEKGRISVGVDLD 479 (545)
T ss_dssp HHCEEEETTTHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHTHHHHHHHHHHTSCHHHHHHHHHHHHHTTCTTEEEETT
T ss_pred hCCCEEeCcCHHHHHHHHHHHHHhhccCccHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhcCCCCcceecc
Confidence 99999999999999999999999988899999999999999999999999999999999999999999877778999999
Q ss_pred CCcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCCC--CCCCCCCCCC
Q 009026 486 NGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRR--DQQPGGGMDE 545 (546)
Q Consensus 486 ~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~~~~--~~~~~~~~~~ 545 (546)
+|++.||++.|||||+.||+++|+.|+|+|++|||||++|..+|.. +.. ++. ||+|++
T Consensus 480 ~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~id~iI~~~~~~-~~~~~~~~-~~~~~~ 539 (545)
T 1a6d_A 480 NNGVGDMKAKGVVDPLRVKTHALESAVEVATMILRIDDVIASKKST-PPSGQGGQ-GQGMPG 539 (545)
T ss_dssp TTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHTCCEEC----------------------
T ss_pred cCccccchhcCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC-CCCCCCCC-CCCCCC
Confidence 9999999999999999999999999999999999999999998875 322 222 356864
No 8
>3iyg_H T-complex protein 1 subunit ETA; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.3e-111 Score=907.07 Aligned_cols=504 Identities=26% Similarity=0.440 Sum_probs=482.0
Q ss_pred ccccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHHHhhh
Q 009026 15 KEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQE 94 (546)
Q Consensus 15 ~~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~ 94 (546)
++++++.+| .+++.+||.||+.|+++++|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++
T Consensus 1 ~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~ 79 (515)
T 3iyg_H 1 KEGTDSSQG-IPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVDIAKSQDA 79 (515)
T ss_pred CCCccccCc-HHHHHHHHHHHHHHHHHHhhCcCCCCCeEEEECCCCCeEEECCHHHHHHHccCCCHHHHHHHHHHHHhhc
Confidence 467778888 5999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCC----HHHHHHHHHhhhc
Q 009026 95 EIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRN----TEEVIYRMKAAVA 170 (546)
Q Consensus 95 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~----~~~l~~i~~t~l~ 170 (546)
++||||||+++||++||+++.+++.+|+||..|++||+.|++.++++|++++.+. +..| ++.|.++++|+++
T Consensus 80 ~~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v----~~~~~~~~~~~L~~va~tsl~ 155 (515)
T 3iyg_H 80 EVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAVTV----KKEDKVEQRKLLEKCAMTALS 155 (515)
T ss_pred eeCcchhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhccc----ccCChHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999998862 3344 6788999999999
Q ss_pred ccc-cCchhhHHHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccceeEeeEEEeccCC-----CCcccccCceEEEE
Q 009026 171 SKQ-FGQEEILCPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV-----GSIKNMEKAKVAVF 244 (546)
Q Consensus 171 sk~-~~~~~~ls~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~-----~~~~~i~n~kI~ll 244 (546)
||+ +.++++|++++++|+.+++. ++|++.|+|+++.||+..||++++|++|++++. ++|++++||||+++
T Consensus 156 sK~~s~~~~~i~~livdAv~~V~~----~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~p~~~~~p~~~en~kIll~ 231 (515)
T 3iyg_H 156 SKLISQQKAFFAKMVVDAVMMLDD----LLQLKMIGIKKVQGGALEESQLVAGVAFKKTFSYAGFEMQPKKYHNPMIALL 231 (515)
T ss_pred CCcccccHHHHHHHHHHHHHHhcc----cCCcceEEEEecCCCCccceEEEeeeEEecCccCcccccCCccccccEEEEE
Confidence 995 55789999999999999963 488889999999999999999999999999874 35889999999999
Q ss_pred EeecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHH
Q 009026 245 AGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELR 324 (546)
Q Consensus 245 ~~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~ 324 (546)
+++|++++++.++++.+++++++..+.++|++++++++++|.+.|++|||++++|++++++||+++||++++++++++|+
T Consensus 232 ~~~Le~~k~e~~~~v~is~~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~dla~~~l~~~gI~~v~~~~k~~le 311 (515)
T 3iyg_H 232 NVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVATQYFADRDMFCAGRVPEEDLK 311 (515)
T ss_pred cccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEECCcccHHHHHHHHHcCCcccccccHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Q 009026 325 RFCRTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAM 404 (546)
Q Consensus 325 ~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~ 404 (546)
|||++|||++++++++++++++|+|+.|++.++|+++|++|++|+ .+.+|||+|||+|+.+++|.||+++||++++|++
T Consensus 312 ria~~tGa~ii~~l~~~~~~~LG~a~~v~~~~ig~~~~~~i~g~~-~~~~~tI~lrG~t~~~l~E~kr~i~DAl~~~r~~ 390 (515)
T 3iyg_H 312 RTMMACGGSIQTSVNALSSDVLGRCQVFEETQIGGERYNFFTGCP-KAKTCTIILRGGAEQFMEETERSLHDAIMIVRRA 390 (515)
T ss_pred HHHHHhCCEEeeccccCCHHHCCcccEEEEEEEcCeEEEEEecCC-CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999997 4889999999999999999999999999999999
Q ss_pred hhCCeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEec
Q 009026 405 CRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDL 484 (546)
Q Consensus 405 ~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~ 484 (546)
++++++|||||++|++++.+|++++...++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+++.++|+|+
T Consensus 391 v~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~ 470 (515)
T 3iyg_H 391 IKNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGMWYGVDI 470 (515)
T ss_pred hhCCCeecCCcHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHhhccCCCeeEeC
Confidence 99989999999999999999999999899999999999999999999999999999999999999999987777899999
Q ss_pred cCCcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcC
Q 009026 485 ENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 528 (546)
Q Consensus 485 ~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~ 528 (546)
.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...
T Consensus 471 ~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_H 471 NTEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNP 514 (515)
T ss_pred CCCcccccHhccCEECHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999753
No 9
>3iyg_G T-complex protein 1 subunit gamma; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.4e-111 Score=907.07 Aligned_cols=505 Identities=26% Similarity=0.488 Sum_probs=479.7
Q ss_pred cccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHHHhhhhhC
Q 009026 18 HKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIG 97 (546)
Q Consensus 18 ~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~G 97 (546)
.++.+| .+++.+||.||+.|++++||||||+||+|||+++.|+++|||||+|||++|+++||+|||++++|++|++++|
T Consensus 2 ~~~~~g-~~~~~~ni~a~~~la~~vkttLGP~G~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~G 80 (515)
T 3iyg_G 2 TKRESG-RKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISRTQDEEVG 80 (515)
T ss_pred Ccccch-HHHHHHHHHHHHHHHHHHhcCcCCCCCeEEEECCCCCeEEECCHHHHHHhcccCCHHHHHHHHHHHHhhhhhC
Confidence 345567 4899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhcccc-cCc
Q 009026 98 DGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQ-FGQ 176 (546)
Q Consensus 98 DGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~-~~~ 176 (546)
|||||+++||++||+++.+|+++|+||..|++||++|++.++++|++++.+ ++..|++.|.++++|+++||. ..+
T Consensus 81 DGTTtvvvLAgeLL~~a~~ll~~GihP~~I~~G~~~A~~~a~~~L~~~s~~----v~~~~~~~l~~va~tsl~sK~i~~~ 156 (515)
T 3iyg_G 81 DGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIP----VDTSNRDTMLNIINSSITTKVISRW 156 (515)
T ss_pred CChhhHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcc----cCCCCHHHHHHHHHHHhcCCchhhH
Confidence 999999999999999999999999999999999999999999999999876 356778999999999999995 457
Q ss_pred hhhHHHHHHHHHHHhcCC--CCCcccccc-hhhhhcCCCCcccceeEeeEEEeccCC--CCcccccCceEEEEEeecccc
Q 009026 177 EEILCPLIADACIQVCPK--NPANFNVDN-VRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFAGGVDTS 251 (546)
Q Consensus 177 ~~~ls~lv~~a~~~v~~~--~~~~~~~~~-I~i~k~~Gg~~~dS~li~Giv~~~~~~--~~~~~i~n~kI~ll~~~l~~~ 251 (546)
.+++++++++|+..+.++ +..++|+++ |+|++++||+++||++++|++|++++. .|+++++||||++++++|+++
T Consensus 157 ~~~~~~i~vdav~~V~~~~~~~~~~dl~~~I~I~ki~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ien~kIll~~~~Le~~ 236 (515)
T 3iyg_G 157 SSLACNIALDAVKTVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYK 236 (515)
T ss_pred HHHHHHHHHHHHHhcccccCCCcccchhheeEEEEecCCCcccceEEeeEEEeCCCCCCCCcceeeeeEEEEEccccccc
Confidence 889999999999998732 223467654 899999999999999999999999984 589999999999999999999
Q ss_pred cccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHhC
Q 009026 252 ATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTG 331 (546)
Q Consensus 252 ~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~tG 331 (546)
+++.++++.+++++++.++.++|++++++++++|++.|++|||++++|++++++||.++||++++++++++|+|||++||
T Consensus 237 k~e~~~~v~is~~~~l~~~l~~E~~~l~~~v~kI~~~g~~vIi~~~~I~~~al~~L~~~~I~av~~~~k~~leria~~tG 316 (515)
T 3iyg_G 237 KGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLAQHYLMRANITAIRRVRKTDNNRIARACG 316 (515)
T ss_pred ccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEECCccCHHHHHHHHHCCceeeccCCHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeccccCCCCCCCccc-ceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCee
Q 009026 332 AVAMLKLCQPNPDDLGY-VDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRI 410 (546)
Q Consensus 332 a~ii~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~~~~~v 410 (546)
|++++++++++++++|+ |+.|++.++|+++|++|++|+ .+.+|||+|||+|+.+++|.||+++||++++|++++++++
T Consensus 317 a~ii~~l~~l~~~~LG~~a~~v~~~~~g~~~~~~i~g~~-~~~~~TIllrG~t~~~l~E~er~i~Dal~~~r~~~~~~~i 395 (515)
T 3iyg_G 317 ARIVSRPEELREEDVGTGAGLLEIKKIGDEYFTFITECK-DPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQL 395 (515)
T ss_pred CeeeccccccChhhcCCcccEEEEEEECCceEEEEeCCC-CCCeEEEEEcCCCHHHHHHHHHHHHHHHHHHHHHhhCCcE
Confidence 99999999999999999 999999999999999999997 4899999999999999999999999999999999999999
Q ss_pred ecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcC-CCceeEeccCCcc
Q 009026 411 VPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASG-KTKVGIDLENGVC 489 (546)
Q Consensus 411 vpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~-~~~~Gid~~~g~i 489 (546)
|||||++|++++.+|++++...++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.++ +.++|+|+.+|++
T Consensus 396 vpGGGa~e~~~~~~L~~~~~~~~g~eq~~i~~~a~Ale~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~ 475 (515)
T 3iyg_G 396 VPGGGASEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTL 475 (515)
T ss_pred EeCCCHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCceeeeCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999763 4579999999999
Q ss_pred cccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcC
Q 009026 490 ADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 528 (546)
Q Consensus 490 ~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~ 528 (546)
.||++.|||||+.||+++|+.|+|+|++|||||++|...
T Consensus 476 ~d~~~~gi~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 514 (515)
T 3iyg_G 476 VDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGH 514 (515)
T ss_pred cccHHcCCEEcHHHHHHHHHHHHHHHHHHHHHHheeecC
Confidence 999999999999999999999999999999999999753
No 10
>3iyg_Q T-complex protein 1 subunit theta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.9e-111 Score=905.36 Aligned_cols=510 Identities=51% Similarity=0.858 Sum_probs=487.8
Q ss_pred cccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHHHhhhh
Q 009026 16 EGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEE 95 (546)
Q Consensus 16 ~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~ 95 (546)
+++++.+|.++++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|+++
T Consensus 1 ~~~~~~~g~~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~~ 80 (512)
T 3iyg_Q 1 EGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQE 80 (512)
T ss_pred CCccccCCHHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEeCCHHHHHHHcccCCHHHHHHHHHHHHhhhh
Confidence 46778888669999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhcccccC
Q 009026 96 IGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFG 175 (546)
Q Consensus 96 ~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~ 175 (546)
+||||||++||+++||+++.+++.+|+||..|++||++|++.++++|+++++... .+..|++.|.++++|+++||..+
T Consensus 81 ~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~~~~~~--~~~~~~~~l~~va~tsl~sK~~~ 158 (512)
T 3iyg_Q 81 VGDGTNFVLVFAGALLELAEELLRLGLSVSEVIEGYEIACKKAHEILPDLVCCSA--KNLRDVDEVSSLLHTSVMSKQYG 158 (512)
T ss_pred hCCChhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhhcccC--CCCCCHHHHHHHHHHHhCCCCcc
Confidence 9999999999999999999999999999999999999999999999999865311 25678999999999999999767
Q ss_pred chhhHHHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccceeEeeEEEeccCCCCcccccCceEEEEEeecccccccc
Q 009026 176 QEEILCPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVGSIKNMEKAKVAVFAGGVDTSATET 255 (546)
Q Consensus 176 ~~~~ls~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~~~~~~i~n~kI~ll~~~l~~~~~~~ 255 (546)
++++|++++++|+.++++++ ..+++++|+|.|.+||++.||++++|++|++++.+||++++|+||+++++||++.+++.
T Consensus 159 ~~~~i~~livdAv~~V~~~~-~~i~v~~I~i~k~~Ggs~~ds~lv~G~~~dk~~~~~~~~~~n~kI~ll~~~le~~~~e~ 237 (512)
T 3iyg_Q 159 NEVFLAKLIAQACVSIFPDS-GHFNVDNIRVCKILGSGVHSSSVLHGMVFKKETEGDVTSVKDAKIAVYSCPFDGMITET 237 (512)
T ss_pred chHHHHHHHHHHHHHHhccC-CcccHhHeeEeeccCCCcccceEEeeEEEecCcCCCCcccccCceEEEecccccccccc
Confidence 78999999999999998752 14899999999999999999999999999999988999999999999999999999999
Q ss_pred cceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHhCCeec
Q 009026 256 KGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAM 335 (546)
Q Consensus 256 ~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~tGa~ii 335 (546)
++++.++++++++.+.+.|++++++++++|++.|++|||++++|++++++||+++||++++++++.+|+|||++|||+++
T Consensus 238 k~~v~Is~~~~l~~~~~~E~~~l~~~v~~I~~~g~~vvi~~~~I~~la~~~l~k~~I~av~~~~~~dle~ia~~tGa~ii 317 (512)
T 3iyg_Q 238 KGTVLIKSAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGRVADMALHYANKYNIMLVRLNSKWDLRRLCKTVGATAL 317 (512)
T ss_pred cceEEeCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEECCCccHHHHHHHHHCCeEEEEeCCHHHHHHHHHHhCCEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCcccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCC
Q 009026 336 LKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAA 415 (546)
Q Consensus 336 ~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~~~~~vvpGGG 415 (546)
+++++++++++|+|++|++.++|+++|++|++|+..+++|||+|||+|+.+++|.||+++|||+++|+++++|++|||||
T Consensus 318 s~l~~~~~~~LG~a~~v~~~~~g~~~~~~~~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpGGG 397 (512)
T 3iyg_Q 318 PRLNPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGG 397 (512)
T ss_pred cccccCCHHHCCcccEEEEEEeCCeEEEEEEcccCCCceEEEEECCCcHHHHHHHHHHHHHHHHHHHHHHhCCCEecCCc
Confidence 99999999999999999999999999999999964578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEeccCC--cccccc
Q 009026 416 ATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENG--VCADIS 493 (546)
Q Consensus 416 ~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~~~g--~i~d~~ 493 (546)
++|++++.+|++++.+.++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+++.++|+|+.+| ++.||+
T Consensus 398 a~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~~~g~~~d~~ 477 (512)
T 3iyg_Q 398 ATEIELAKQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDML 477 (512)
T ss_pred HHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCcEEEecCCCCCcccchH
Confidence 999999999999998899999999999999999999999999999999999999999988778999999965 999999
Q ss_pred cCccccchHHHHHHHHHHHHHHHHHhchhhhhhcC
Q 009026 494 TMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 528 (546)
Q Consensus 494 ~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~ 528 (546)
+.|||||+.||+++|+.|+|+|++|||||++|.++
T Consensus 478 ~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~k 512 (512)
T 3iyg_Q 478 EAGVLDTYLGKYWAIKLATNAAVTVLRVDQIIMAK 512 (512)
T ss_pred hccCeEcHHHHHHHHHHHHHHHHHHHhHhHheecC
Confidence 99999999999999999999999999999999753
No 11
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=100.00 E-value=1.9e-110 Score=901.75 Aligned_cols=506 Identities=26% Similarity=0.433 Sum_probs=482.3
Q ss_pred ccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCC--CCEEEecCHHHHHHhccccChHHHHHHHHHHHhhh
Q 009026 17 GHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHL--DKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQE 94 (546)
Q Consensus 17 ~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~--g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~ 94 (546)
+.++.+| .+++.+|+.||+.|+++++|||||+||+|||+++. |+++|||||+|||++|+++||+|+|++++|++|++
T Consensus 2 ~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~~G~~~iTnDG~tIlk~i~v~hp~Akll~e~a~~qd~ 80 (513)
T 3iyg_B 2 GADEERA-ETARLSSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTNDGATILKNIGVDNPAAKVLVDMSRVQDD 80 (513)
T ss_pred Ccchhhh-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEeecCCCCCCeEEECCHHHHHHHccccCHHHHHHHHHHHHhhh
Confidence 3455567 59999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred hhCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCC-CCHHHHHHHHHhhhcccc
Q 009026 95 EIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDV-RNTEEVIYRMKAAVASKQ 173 (546)
Q Consensus 95 ~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~-~~~~~l~~i~~t~l~sk~ 173 (546)
++||||||+++||++||+++.+++.+|+||..|++||++|++.++++|++++++... +. .+++.|.++++|+++||+
T Consensus 81 e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~--~~~~~~~~l~~va~tslssK~ 158 (513)
T 3iyg_B 81 EVGDGTTSVTVLAAELLREAESLIAKKIHPQTIIAGWREATKAARQALLNSAVDHGS--DEVKFRQDLMNIAGTTLSSKL 158 (513)
T ss_pred hhCCChhhhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcCccc--ccccCHHHHHHHHHhhhcccc
Confidence 999999999999999999999999999999999999999999999999999886211 11 368899999999999996
Q ss_pred c-CchhhHHHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccceeEeeEEEeccCC-CCcccccCceEEEEEeecccc
Q 009026 174 F-GQEEILCPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV-GSIKNMEKAKVAVFAGGVDTS 251 (546)
Q Consensus 174 ~-~~~~~ls~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~-~~~~~i~n~kI~ll~~~l~~~ 251 (546)
. +++++|++++++|+.+++++ +|++.|+|+++.||+..||++++|++|++++. .||++++||||++++++|+++
T Consensus 159 ~~~~~~~i~~livdAv~~V~~~----~d~~~I~V~ki~gg~~~ds~lv~G~v~dk~~~~~m~~~~en~kIll~~~~Le~~ 234 (513)
T 3iyg_B 159 LTHHKDHFTKLAVEAVLRLKGS----GNLEAIHVIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIANTGMDTD 234 (513)
T ss_pred cccchHHHHHHHHHHHHHhccc----CCcCeEEEEEeCCCCccceeEEeeEEEeccccCCCceeecCceEEEEcCCcccc
Confidence 4 57889999999999999753 78889999999999999999999999999883 499999999999999999999
Q ss_pred ccc-ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHh
Q 009026 252 ATE-TKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTT 330 (546)
Q Consensus 252 ~~~-~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~t 330 (546)
+++ .++++.+++++++..+.+.|++++++++++|++.|++|||++++|++.+++||.++||++++++++.+|+|||++|
T Consensus 235 k~e~~~~~v~iss~~~l~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~t 314 (513)
T 3iyg_B 235 KIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVT 314 (513)
T ss_pred cccccCCceEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHh
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCee
Q 009026 331 GAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRI 410 (546)
Q Consensus 331 Ga~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~~~~~v 410 (546)
||++++++++++++++|+|+.|++..+|+++|++|++|+ .+++|||+|||+|+.+++|.||++|||++++|++++++++
T Consensus 315 Ga~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~-~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~i 393 (513)
T 3iyg_B 315 GGEIASTFDHPELVKLGSCKLIEEVMIGEDKLIHFSGVA-LGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRT 393 (513)
T ss_pred CCEEecccccCCHhHCCcccEEEEEEECCeEEEEEecCC-CCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcE
Confidence 999999999999999999999999999999999999997 4789999999999999999999999999999999999899
Q ss_pred ecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEeccCCccc
Q 009026 411 VPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCA 490 (546)
Q Consensus 411 vpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~~~g~i~ 490 (546)
|||||++|++++.+|++++.+.++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+++.++|+|+.+|++.
T Consensus 394 VpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~ 473 (513)
T 3iyg_B 394 VYGGGCSEMLMAHAVTQLASRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGKTTAGLDMKEGTIG 473 (513)
T ss_pred EeCCcHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeecCCCCCcc
Confidence 99999999999999999998899999999999999999999999999999999999999999988778899999999999
Q ss_pred ccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcCCC
Q 009026 491 DISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPA 530 (546)
Q Consensus 491 d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~ 530 (546)
||++.|||||+.||+++|+.|+|+|++|||||++|..+|+
T Consensus 474 d~~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~ 513 (513)
T 3iyg_B 474 DMSVLGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPR 513 (513)
T ss_pred chHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999999999999988763
No 12
>3p9d_G T-complex protein 1 subunit ETA; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_g* 4d8q_G* 4d8r_g*
Probab=100.00 E-value=3.2e-112 Score=920.76 Aligned_cols=525 Identities=26% Similarity=0.435 Sum_probs=484.8
Q ss_pred CCCCCCCcccccccccccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccCh
Q 009026 1 MGFSMQPYGIQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHP 80 (546)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP 80 (546)
|.+.|. ++...+++++.++.+| .+++.+||.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||
T Consensus 1 ~~~~~~-~~~~~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hP 78 (550)
T 3p9d_G 1 MNFGSQ-TPTIVVLKEGTDASQG-KGQIISNINACVAVQEALKPTLGPLGSDILIVTSNQKTTISNDGATILKLLDVVHP 78 (550)
T ss_dssp ----------------CCCEEES-HHHHHHHHHHHHHHHTTTGGGSTTTCCCEEEECSSSCEEEECCHHHHTTTSCCCSH
T ss_pred CCcccC-CcchhhhcCCcchhhh-HHHHHHHHHHHHHHHHHHHhccCCCCCcEEEECCCCCeEEECCHHHHHHHccCCCH
Confidence 444443 3667788999999889 59999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCC---
Q 009026 81 AAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRN--- 157 (546)
Q Consensus 81 ~a~ll~~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~--- 157 (546)
+|+|++++|++|++++||||||++|||++||+++.+++.+|+||..|++||++|++.++++|++++.+ ++..|
T Consensus 79 ~Akll~e~a~~qd~e~GDGTTtvvVLA~~Ll~~a~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~----v~~~~~~~ 154 (550)
T 3p9d_G 79 AAKTLVDISRAQDAEVGDGTTSVTILAGELMKEAKPFLEEGISSHLIMKGYRKAVSLAVEKINELAVD----ITSEKSSG 154 (550)
T ss_dssp HHHHHHHHHHHHHTTTSSCHHHHHHHHHHHHHTTSHHHHSSSCTTHHHHHHHHHHHHHHHHHHHSEEC----CCCC----
T ss_pred HHHHHHHHHHHhhhhhCCCceehHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccc----CCCCcchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999886 23344
Q ss_pred HHHHHHHHHhhhcccc-cCchhhHHHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccceeEeeEEEeccCC-----C
Q 009026 158 TEEVIYRMKAAVASKQ-FGQEEILCPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV-----G 231 (546)
Q Consensus 158 ~~~l~~i~~t~l~sk~-~~~~~~ls~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~-----~ 231 (546)
++.|.++++|+++||+ +.++++|++++++|+.+++++ ++|+++|+|++++||+++||++++|++|++++. +
T Consensus 155 ~~~L~~vA~tsl~sK~~~~~~~~i~~livdAv~~V~~~---~~dl~~I~Vikv~Gg~~~ds~lv~G~~~dk~~~s~yf~~ 231 (550)
T 3p9d_G 155 RELLERCARTAMSSKLIHNNADFFVKMCVDAVLSLDRN---DLDDKLIGIKKIPGGAMEESLFINGVAFKKTFSYAGFEQ 231 (550)
T ss_dssp --CHHHHHHHHHHHTTTGGGHHHHHHHHHHHHHHCCSS---SCCGGGCCCCBCCSSCGGGCCCCSSEEECCCSSCTTCSC
T ss_pred HHHHHHHHHHhccCccccccHhHHHHHHHHHHHHhCcc---ccCchheeEEEecCCCccceeEEeeEEEecccccccccc
Confidence 7889999999999995 567899999999999999752 488999999999999999999999999999873 6
Q ss_pred CcccccCceEEEEEeecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCC
Q 009026 232 SIKNMEKAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYK 311 (546)
Q Consensus 232 ~~~~i~n~kI~ll~~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~ 311 (546)
||++++||||++++++|++++++.++++.+++++++..+.+.|++++++++++|++.|++|||++++|++++++||+++|
T Consensus 232 ~~~~~en~kIll~~~~Le~~k~e~~~~v~is~~~~l~~il~~E~~~l~~~v~~I~~~g~~vVi~~~~I~dla~~~L~~~g 311 (550)
T 3p9d_G 232 QPKKFNNPKILSLNVELELKAEKDNAEVRVEHVEDYQAIVDAEWQLIFEKLRQVEETGANIVLSKLPIGDLATQFFADRN 311 (550)
T ss_dssp SCSCCSSCCEEEECSCCSCCCCSSCEEEEECSSSHHHHHHHHHHHHHHHHHHHHHTTTCSEEEESSCCCHHHHHTTGGGT
T ss_pred CcccccCceEEEeccccccccccccceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCccHHHHHHHHHcC
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecCHHHHHHHHHHhCCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHH
Q 009026 312 LMVLKISSKFELRRFCRTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLE 391 (546)
Q Consensus 312 I~vv~~v~~~~l~~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~ 391 (546)
|++++++++++|+|||++|||++++++++++++.+|+|+.|++.++|+++|++|++|+ .+++|||+|||+|+.+++|.|
T Consensus 312 I~~v~~v~k~~lerIa~~tGa~iis~l~~l~~~~LG~a~~v~~~~ig~e~~~~~~g~~-~~~~~tI~lrG~te~~l~E~k 390 (550)
T 3p9d_G 312 IFCAGRVSADDMNRVIQAVGGSIQSTTSDIKPEHLGTCALFEEMQIGSERYNLFQGCP-QAKTCTLLLRGGAEQVIAEVE 390 (550)
T ss_dssp CEEEECCCTTHHHHHHHHTCCCCBSSGGGCCGGGCCCCSBCCCCCCSSSCCEEEBCCT-TCCCCCCCBCSSSHHHHHHHH
T ss_pred CccccCcCHHHHHHHHHHhCCceecchhhCCHHHcCCceEEEEEEeCCeEEEEEecCC-CCceeEEEEeCCcHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999997 488999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCCeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHH
Q 009026 392 RAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYA 471 (546)
Q Consensus 392 r~~~dal~~l~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~ 471 (546)
|+++|||+++|+++++|++|||||++|++++.+|++++...++++|+++++||+|||.||++|++|||+|+.+++.+|++
T Consensus 391 r~l~DAl~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~ 470 (550)
T 3p9d_G 391 RSLHDAIMIVKRALQNKLIVAGGGATEMEVSKCLRDYSKTIAGKQQMIINAFAKALEVIPRQLCENAGFDAIEILNKLRL 470 (550)
T ss_dssp HHHHHHHHHHHHHHHSCCEEETTTHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHTHHHHHHHHTSCSCHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHHhcCCcccCCCHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999889999999999999999999999999999999999999999
Q ss_pred HHhcCCCceeEeccCCcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCCC
Q 009026 472 EHASGKTKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPRR 535 (546)
Q Consensus 472 ~~~~~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~~~~ 535 (546)
.|.+++.++|+|+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|..+|...+..
T Consensus 471 ~h~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~a~~iL~id~ii~~~~~~~~~~ 534 (550)
T 3p9d_G 471 AHSKGEKWYGVVFETENIGDNFAKFVWEPALVKINALNSATEATNLILSVDETITNKGSESANA 534 (550)
T ss_dssp HHHHSCSCCCBCSSSSSBCCHHHHTCEEEHHHHHHHHHHHHHHHHHHHTEEEEECCCCCC----
T ss_pred HHhcCCCceeeeCCCCcccchHhccCEecHHHHHHHHHHHHHHHHHHHhHHHHhhCCCcccccC
Confidence 9977777899999999999999999999999999999999999999999999999988755533
No 13
>3iyg_D T-complex protein 1 subunit delta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=3.3e-110 Score=900.87 Aligned_cols=505 Identities=28% Similarity=0.517 Sum_probs=482.5
Q ss_pred ccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHHHhhhhhCC
Q 009026 19 KHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGD 98 (546)
Q Consensus 19 ~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 98 (546)
++.+| .+++.+|+.||+.|+++++|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 5 ~~~~g-~~~~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~~~a~~qd~~~GD 83 (518)
T 3iyg_D 5 DRDKP-AQIRFSNISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGD 83 (518)
T ss_pred cchhh-HHHHHHHHHHHHHHHHHHHhccCCCCCceeeeCCCCCeEEECCHHHHHHHcccchHHHHHHHHHHHHhhhhhCC
Confidence 34566 48999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhcccc-cCch
Q 009026 99 GANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQ-FGQE 177 (546)
Q Consensus 99 Gttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~-~~~~ 177 (546)
||||++|||++||+++.+++.+|+||..|++||++|++.++++|++++.+ ++..|++.|.++++|+++||+ ..++
T Consensus 84 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~----v~~~~~~~l~~vA~tsl~sK~~~~~~ 159 (518)
T 3iyg_D 84 GTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRP----VELSDRETLLNSAATSLNSKVVSQYS 159 (518)
T ss_pred CceeHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHheee----CCCCChHHHHHHhHhhhccccchhhH
Confidence 99999999999999999999999999999999999999999999999886 355689999999999999995 4578
Q ss_pred hhHHHHHHHHHHHhcCC-CCCcccccchhhhhcCCCCcccceeEeeEEEeccCC-CCcccccCceEEEEEeecccccccc
Q 009026 178 EILCPLIADACIQVCPK-NPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV-GSIKNMEKAKVAVFAGGVDTSATET 255 (546)
Q Consensus 178 ~~ls~lv~~a~~~v~~~-~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~-~~~~~i~n~kI~ll~~~l~~~~~~~ 255 (546)
++|++++++|+.++++. +...||+++|+|+++.||+..||++++|++|++++. +||++++||||++++|+|+++++++
T Consensus 160 ~~i~~livdAv~~V~~~~~~~~~d~~~I~V~k~~Gg~~~ds~lv~G~~~dk~~~~~mp~~i~n~kIlll~~~Le~~k~~~ 239 (518)
T 3iyg_D 160 SLLSPMSVDAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDM 239 (518)
T ss_pred HHHHHHHHHHHHHhhccccCCCcccceEEEEEcCCCChhhheEeccEEEecccccCCCccccCceEEEEEeecccccccc
Confidence 99999999999999752 122488999999999999999999999999999987 6999999999999999999999999
Q ss_pred cceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEe-----CCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHh
Q 009026 256 KGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVS-----GAAVGEMALHFCERYKLMVLKISSKFELRRFCRTT 330 (546)
Q Consensus 256 ~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~-----~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~t 330 (546)
+.++.+++++++..+.++|++++++++++|.+.|+||||+ +++|++.+++||.++||++++++++.+|+|||++|
T Consensus 240 ~~~i~is~~~~~~~~~~~E~~~l~~~le~I~~~g~~lvi~~k~i~~~~I~~~Al~~L~~~~I~av~~~~~~~le~ia~~t 319 (518)
T 3iyg_D 240 DNQIVVSDYVQMDRVLREERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDIEREDIEFICKTI 319 (518)
T ss_pred CceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccccccCcCHHHHHHHHHcCcEEEecCCHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999 89999999999999999999999999999999999
Q ss_pred CCeeccccCCCCCCCcccceeEEEEEECC-eEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCe
Q 009026 331 GAVAMLKLCQPNPDDLGYVDSVSVEEIGG-ARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSR 409 (546)
Q Consensus 331 Ga~ii~~l~~l~~~~lG~~~~v~~~~ig~-~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~~~~~ 409 (546)
||++++++++++++++|+|+.|++.++|+ ++|++|++|++.+++|||+|||+|+.+++|.||+++||++++|+++++|+
T Consensus 320 Ga~ii~~l~~l~~~~LG~a~~v~~~~~g~~~~~~~~~g~~~~~~~~tI~lrG~te~~l~E~kr~l~DAl~~~r~av~~~~ 399 (518)
T 3iyg_D 320 GTKPVAHVDQFTADMLGSAELAEEVSLNGSGKLIKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRA 399 (518)
T ss_pred CCEEecccccCCHHHCCcCcEEEEEEeCCCceEEEEECCCCCCceEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999 89999999974478999999999999999999999999999999999999
Q ss_pred eecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEeccCCcc
Q 009026 410 IVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVC 489 (546)
Q Consensus 410 vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~~~g~i 489 (546)
+|||||++|++++.+|++++...++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+++.++|+|+.+|++
T Consensus 400 iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~ 479 (518)
T 3iyg_D 400 LIAGGGAPEIELALRLTEYSRTLSGMESYCIRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGI 479 (518)
T ss_pred EeecCcHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhccCCceeEeCCCCcc
Confidence 99999999999999999999889999999999999999999999999999999999999999998877789999999999
Q ss_pred cccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcC
Q 009026 490 ADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 528 (546)
Q Consensus 490 ~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~ 528 (546)
.||++.|||||+.||+++|+.|+|+|++|||||++|.++
T Consensus 480 ~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 518 (518)
T 3iyg_D 480 SNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR 518 (518)
T ss_pred cchhhccCEEcHHHHHHHHHHHHHHHHHHHhhcceEecC
Confidence 999999999999999999999999999999999999764
No 14
>3p9d_A T-complex protein 1 subunit alpha; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_a* 4d8q_A* 4d8r_a*
Probab=100.00 E-value=2.6e-110 Score=907.43 Aligned_cols=512 Identities=29% Similarity=0.463 Sum_probs=486.1
Q ss_pred cccccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHHHhh
Q 009026 14 LKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQ 93 (546)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~ 93 (546)
|+++.+..+| .+++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|+
T Consensus 13 ~~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd 91 (559)
T 3p9d_A 13 LFLGGEKISG-DDIRNQNVLATMAVANVVKSSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQD 91 (559)
T ss_dssp CCSSCEEEET-HHHHHHHHHHHHHHHHHTTTTSSTTCCEEEECCSSSCCCEECCHHHHHHHHCCCSHHHHHHHHHHHHHH
T ss_pred hhccccccch-HHHHHHHHHHHHHHHHHHHhccCCCCCeeEeEcCCCCEEEECCHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 5778878788 599999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHh-hhhccCCCCCCCCHHHHHHHHHhhhccc
Q 009026 94 EEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEE-LVEEGSENMDVRNTEEVIYRMKAAVASK 172 (546)
Q Consensus 94 ~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~-~~~~~~~~~~~~~~~~l~~i~~t~l~sk 172 (546)
+++||||||++|||++||+++.+++.+|+||..|++||++|++.++++|++ ++.+ ++..|++.|.++++|+++||
T Consensus 92 ~e~GDGTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~~s~~----v~~~~~e~L~~vA~tsl~sK 167 (559)
T 3p9d_A 92 REIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTS----VDTLGKETLINIAKTSMSSK 167 (559)
T ss_dssp HHTSSCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHTGGG----SCC--CTTHHHHHHHTTSSS
T ss_pred HHcCCCcchHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhcccC----CCCCCHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999999999 8876 24456788999999999999
Q ss_pred c-cCchhhHHHHHHHHHHHhcC-C--CCCcccccchhhhhcCCCCcccceeEeeEEEeccC--CCCccccc--CceEEEE
Q 009026 173 Q-FGQEEILCPLIADACIQVCP-K--NPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDA--VGSIKNME--KAKVAVF 244 (546)
Q Consensus 173 ~-~~~~~~ls~lv~~a~~~v~~-~--~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~--~~~~~~i~--n~kI~ll 244 (546)
+ ..++++|++++++|+.++++ + +...|++++|+|++++||+++||++++|++|++++ .+||++++ ||||+++
T Consensus 168 ~~~~~~~~i~~livdAv~~V~~~~~~~~~~i~l~~I~I~k~~Ggs~~ds~lv~G~v~dk~~~~~~m~~~ie~~n~kIll~ 247 (559)
T 3p9d_A 168 IIGADSDFFSNMVVDALLAVKTQNSKGEIKYPVKAVNVLKAHGKSATESLLVPGYALNCTVASQAMPKRIAGGNVKIACL 247 (559)
T ss_dssp GGGTTHHHHHHHHHHHHHHHCCEESSSCEECCTTCCCEEEEESSCSSCCBCCSEECCCCCCSSTTSCSEECSSSBCEEEE
T ss_pred cccchhHHHHHHHHHHHHHhcccccCCCCccchhHeEEEEecCCCccceeEeccEEEeecccCCCcceeeccCCceEEEE
Confidence 5 45789999999999999984 1 12358899999999999999999999999999987 46899999 9999999
Q ss_pred EeecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHH
Q 009026 245 AGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELR 324 (546)
Q Consensus 245 ~~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~ 324 (546)
+++|++++++.++++.+++++++..+.++|++++++++++|++.|++|||++++|++.+++||.++||++++++++.+|+
T Consensus 248 ~~~Le~~k~e~~~~v~is~~~~l~~i~~~E~~~l~~~le~I~~~g~~lvI~~~~I~~~al~~L~~~~I~av~~~~k~~le 327 (559)
T 3p9d_A 248 DLNLQKARMAMGVQINIDDPEQLEQIRKREAGIVLERVKKIIDAGAQVVLTTKGIDDLCLKEFVEAKIMGVRRCKKEDLR 327 (559)
T ss_dssp TTCCSCCCCCTTCCEEECSSSCHHHHHHHHHHHHHHHHHHHHTTCCSEEEESSCCCGGGTHHHHHTTCEEESSCCHHHHH
T ss_pred eccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhhCCCEEEEcCCCCHHHHHHHHHcCCceEccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCeecccc------CCCCCCCcccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHH
Q 009026 325 RFCRTTGAVAMLKL------CQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGV 398 (546)
Q Consensus 325 ~ia~~tGa~ii~~l------~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal 398 (546)
|||++|||++++++ ++++++++|+|+.|++.++++++|++|++|+ .+++|||+|||+|+.+++|.||+++||+
T Consensus 328 ~ia~~TGa~iis~~~~l~~~e~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~-~~~~~tI~lrG~te~~l~E~kr~l~DAL 406 (559)
T 3p9d_A 328 RIARATGATLVSSMSNLEGEETFESSYLGLCDEVVQAKFSDDECILIKGTS-KHSSSSIILRGANDYSLDEMERSLHDSL 406 (559)
T ss_dssp HHHHHSSCCCBCCSCCSTTCCCCCTTTSCCEEEEEEEECSSCEEECEEEES-SSCCCCEEEEESCHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCEEEeccccccccccCCHhHCccceEEEEEEEcCceEEEEEcCC-CCCEEEEEEcCCCHHHHHHHHHHHHHHH
Confidence 99999999999998 7888999999999999999999999999997 4889999999999999999999999999
Q ss_pred HHHHHHhhCCeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCC
Q 009026 399 NTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKT 478 (546)
Q Consensus 399 ~~l~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~ 478 (546)
+++|+++++|++|||||++|++++.+|++++.+.++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+++.
T Consensus 407 ~~~r~av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~ 486 (559)
T 3p9d_A 407 SVVKRTLESGNVVPGGGCVEAALNIYLDNFATTVGSREQLAIAEFAAALLIIPKTLAVNAAKDSSELVAKLRSYHAASQM 486 (559)
T ss_dssp HHHHHHHTSSCEECTTTTHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHHHHHHHHHTSSSCCHHHHHHHHHHHHTTSC
T ss_pred HHHHHHhhcCCEEeCccHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHhcccc
Confidence 99999999999999999999999999999998899999999999999999999999999999999999999999976654
Q ss_pred ------------ceeEeccCCcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCC
Q 009026 479 ------------KVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAG 531 (546)
Q Consensus 479 ------------~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~ 531 (546)
++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|...|+.
T Consensus 487 ~~~~~~~~~~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 551 (559)
T 3p9d_A 487 AKPEDVKRRSYRNYGLDLIRGKIVDEIHAGVLEPTISKVKSLKSALEACVAILRIDTMITVDPEP 551 (559)
T ss_dssp CC----CCCCCCCEEECTTSSSEEESTTSSCCEEHHHHHHHHHHHHHHHHHHHTEEEEEECCCCC
T ss_pred ccccccccccccceeEECCCCcEeehhhccCEecHHHHHHHHHHHHHHHHHHHhHHhhhhcCCcc
Confidence 79999999999999999999999999999999999999999999999987663
No 15
>3iyg_Z T-complex protein 1 subunit zeta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=4.1e-109 Score=891.18 Aligned_cols=497 Identities=25% Similarity=0.430 Sum_probs=476.2
Q ss_pred cChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHHHhhhhhCCCch
Q 009026 22 SGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGAN 101 (546)
Q Consensus 22 ~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGtt 101 (546)
+| .+++.+||.||++|+++++|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++|||||
T Consensus 7 ~~-~~a~~~ni~a~~~la~~vkttlGPkG~~kml~~~~g~~~iTnDG~tIlk~i~v~hp~akll~~~a~~qd~e~GDGTT 85 (517)
T 3iyg_Z 7 RA-QAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTT 85 (517)
T ss_pred hH-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHHHHHhCCCce
Confidence 45 59999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhccccc-CchhhH
Q 009026 102 LTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQF-GQEEIL 180 (546)
Q Consensus 102 t~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~-~~~~~l 180 (546)
|+++|+++||+++.+++.+|+||..|++||++|++.++++|++++.+. +. +++.|.++++|+++||+. .+.++|
T Consensus 86 tvvvLa~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v----~~-~~~~L~~va~tsl~sKi~~~~~d~l 160 (517)
T 3iyg_Z 86 SNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQFLEQVKVSK----EM-DRETLIDVARTSLRTKVHAELADVL 160 (517)
T ss_pred eHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhhCcCC----CC-CHHHHHHHHHHHhccccchhHHHHH
Confidence 999999999999999999999999999999999999999999998752 33 789999999999999964 468999
Q ss_pred HHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccceeEeeEEEeccCC--CCcccccCceEEEEEeecccccccccce
Q 009026 181 CPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFAGGVDTSATETKGT 258 (546)
Q Consensus 181 s~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~--~~~~~i~n~kI~ll~~~l~~~~~~~~~~ 258 (546)
++++++|+..+.+.+ ..+|+++|+|+|++||+..||++++|++|++++. +||++++||||++++++|++++++.+++
T Consensus 161 a~l~vdaV~~V~~~~-~~~dl~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~p~m~~~ien~kIll~~~~le~~k~e~~~~ 239 (517)
T 3iyg_Z 161 TEAVVDSILAIKKQD-EPIDLFMVEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSG 239 (517)
T ss_pred HHHHHHHhheeccCC-CcCChhHheeeeecCCCccccceEeeEEEeccCCCCCccccccCCeEEEeccccccccccccee
Confidence 999999999987543 3589999999999999999999999999999873 6899999999999999999999999999
Q ss_pred EEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCc---------EEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHH
Q 009026 259 VLIHNAEQLENYAKTEEAKVEGLIKAVAESGAE---------VIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRT 329 (546)
Q Consensus 259 v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~---------vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~ 329 (546)
+.++++++++++.++|+++++..+++|...+++ |||++++|++.+++||.++||++++++++++|+|||++
T Consensus 240 ~~i~~~~~l~~~~~~E~~~i~~~v~~I~~~~~~v~~~~~~~lvIi~~~~I~d~al~~L~~~gI~~v~~v~~~~leria~~ 319 (517)
T 3iyg_Z 240 FFYKSAEEREKLVKAERKFIEDRVKKIIELKKKVCGDSDKGFVVINQKGIDPFSLDALAKEGIIALRRAKRRNMERLTLA 319 (517)
T ss_pred EEeCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCCceEEEecccCCHHHHHHHHHCCCEEEEecCHHHHHHHHHH
Confidence 999999999999999999999999999999877 58999999999999999999999999999999999999
Q ss_pred hCCeeccccCCCCCCC-cccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCC
Q 009026 330 TGAVAMLKLCQPNPDD-LGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDS 408 (546)
Q Consensus 330 tGa~ii~~l~~l~~~~-lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~~~~ 408 (546)
|||+++++++++++++ +|+|+ |++.++|+++|++|++|+ .++.|||+|||+|+.+++|.||++|||++++|+++++|
T Consensus 320 tGa~iv~~l~~l~~~~~LG~a~-v~e~~ig~~~~~~~~g~~-~~~~~TI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~ 397 (517)
T 3iyg_Z 320 CGGIALNSLDDLNPDCLLGHAG-VYEYTLGEEKFTFIEKCN-NPRSVTLLIKGPNKHTLTQIKDAIRDGLRAVKNAIDDG 397 (517)
T ss_pred hCCEEecchhhCcccccCCcce-EEEEEEcCceEEEEeCCC-CchhheeeecCCcHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9999999999999999 99999 999999999999999997 48899999999999999999999999999999999999
Q ss_pred eeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEeccCCc
Q 009026 409 RIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGV 488 (546)
Q Consensus 409 ~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~~~g~ 488 (546)
++|||||++|++++.+|++++.+.++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+++.++|+|+.+|+
T Consensus 398 ~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~iP~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~ 477 (517)
T 3iyg_Z 398 CVVPGAGAVEVAMAEALVKYKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKVQAEHSESGQLVGVDLNTGE 477 (517)
T ss_pred eEecCccHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCcEEEeCCCCc
Confidence 99999999999999999999988899999999999999999999999999999999999999999877788999999999
Q ss_pred ccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhc
Q 009026 489 CADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMA 527 (546)
Q Consensus 489 i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~ 527 (546)
+.||++.|||||+.||+++|+.|+|+|++|||||++|.+
T Consensus 478 ~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~ 516 (517)
T 3iyg_Z 478 PMVAAEAGIWDNYCVKKQLLHSCTVIATNILLVDEIMRA 516 (517)
T ss_pred ccchhhccCeecHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999975
No 16
>3iyg_E T-complex protein 1 subunit; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus}
Probab=100.00 E-value=7.8e-109 Score=890.39 Aligned_cols=505 Identities=27% Similarity=0.445 Sum_probs=480.4
Q ss_pred ccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHHHhhhhhCC
Q 009026 19 KHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGD 98 (546)
Q Consensus 19 ~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 98 (546)
.+.+| .+++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 4 ~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~g~~~iTnDG~tIlk~i~~~hP~Akll~~~a~~qd~~~GD 82 (515)
T 3iyg_E 4 SRLMG-LEALKSHIMAAKAVANTMKTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGD 82 (515)
T ss_pred hhhch-HHHHHHHHHHHHHHHHHHhhccCCCCCeEEEEcCCCCeEEeCcHHHHHHHcccCCHHHHHHHHHHHHhhhhhCC
Confidence 34567 59999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhccccc-Cch
Q 009026 99 GANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQF-GQE 177 (546)
Q Consensus 99 Gttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~-~~~ 177 (546)
||||++|||++||+++.+++.+|+||..|++||+.|++.++++|++++.+... +..|++.|.++++|+++||.. .+.
T Consensus 83 GTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~--~~~~~~~l~~vA~tsl~sK~i~~~~ 160 (515)
T 3iyg_E 83 GTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARIAIEHLDKISDSVLV--DMKNTEPLIQTAKTTLGSKVVNSCH 160 (515)
T ss_pred chhHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhceecCC--CccCHHHHHHHHHHHhcccchhHHH
Confidence 99999999999999999999999999999999999999999999999876321 335689999999999999954 468
Q ss_pred hhHHHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccceeEeeEEEeccCC--CCcccccCceEEEEEeecccccccc
Q 009026 178 EILCPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFAGGVDTSATET 255 (546)
Q Consensus 178 ~~ls~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~--~~~~~i~n~kI~ll~~~l~~~~~~~ 255 (546)
++|++++++|+..+.+....++|+++|+|++++||++.||++++|++|++++. +||+.++||||++++|||++.+++.
T Consensus 161 ~~l~~l~~dav~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lv~G~~~dk~~~~~~m~~~~~~~kIall~~~le~~k~~~ 240 (515)
T 3iyg_E 161 RQMAEIAVNAVLTVADMQRRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKQVEDAKIAILTCPFEPPKPKT 240 (515)
T ss_pred HHHHHHHHHHHHhhcccccCCCCcccEEEEEecCCCcccceEEeeEEEecccccccccccCCCceEEEEcCccccccccc
Confidence 99999999999999764333588899999999999999999999999999984 6899999999999999999999999
Q ss_pred cceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHhCCeec
Q 009026 256 KGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAM 335 (546)
Q Consensus 256 ~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~tGa~ii 335 (546)
++++.+++++++..+.++|+++++++++++.+.|++|||++++|++.+++||.++||++++++++.+|+|||++|||+++
T Consensus 241 ~~~~~is~~~~l~~~~~~E~~~l~~~lekI~~~g~~vvi~~~~I~~~al~~L~~~~I~~v~~v~k~~le~ia~~tGa~ii 320 (515)
T 3iyg_E 241 KHKLDVTSVEDFKALQKYEKEKFEEMIRQIKETGANLAVCQWGFDDEANHLLLQNDLPAVRWVGGPEIELIAIATGGRIV 320 (515)
T ss_pred cceeeeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHHHHhCCEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCcccceeEEEEEECC--eEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCeeecC
Q 009026 336 LKLCQPNPDDLGYVDSVSVEEIGG--ARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPG 413 (546)
Q Consensus 336 ~~l~~l~~~~lG~~~~v~~~~ig~--~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~~~~~vvpG 413 (546)
+++++++++++|+|+.|++.++|+ ++|++|++|+ .++.|||+|||+|+.+++|.||+++||++++|+++++|++|||
T Consensus 321 ~~l~~l~~~~LG~a~~v~~~~ig~~k~~~~~~~g~~-~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~a~~~~~iVpG 399 (515)
T 3iyg_E 321 PRFSELTAEKLGFAGLVKEISFGTTKDKMLVIEQCK-NSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYG 399 (515)
T ss_pred cccccCCHHHCCcceEEEEEEeccccceEEEEEcCC-CCceEEEEEeCCcHHHHHHHHHHHHHHHHHHHHHHhcCCcCCC
Confidence 999999999999999999999997 8999999997 4889999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhc-CCCceeEeccCCccccc
Q 009026 414 AAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHAS-GKTKVGIDLENGVCADI 492 (546)
Q Consensus 414 GG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~-~~~~~Gid~~~g~i~d~ 492 (546)
||++|++++.+|++++...++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+ ++.++|+|+.+|++.||
T Consensus 400 GGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~~G~d~~~g~~~d~ 479 (515)
T 3iyg_E 400 GGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALAENSGMNPIQTMTEVRARQVKEVNPALGIDCLHKGTNDM 479 (515)
T ss_pred CcHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHhccCCCeeeEecCCCcccch
Confidence 99999999999999998899999999999999999999999999999999999999999975 45689999999999999
Q ss_pred ccCccccchHHHHHHHHHHHHHHHHHhchhhhhhc
Q 009026 493 STMNVWDLYVTKFFALKYAADAACTVLRVDQIIMA 527 (546)
Q Consensus 493 ~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~ 527 (546)
++.|||||+.||+++|+.|+|+|++|||||++|.+
T Consensus 480 ~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~ 514 (515)
T 3iyg_E 480 KHQHVIETLIGKKQQISLATQMVRMILKIDDIRKP 514 (515)
T ss_pred HhccCEEcHHHHHHHHHHHHHHHHHHHhHHHhhcC
Confidence 99999999999999999999999999999999975
No 17
>3p9d_D T-complex protein 1 subunit delta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_d* 4d8q_D* 4d8r_d*
Probab=100.00 E-value=9.3e-111 Score=906.15 Aligned_cols=511 Identities=25% Similarity=0.470 Sum_probs=486.3
Q ss_pred ccccccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHHHh
Q 009026 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQ 92 (546)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~ 92 (546)
-++.+.+..+| ++++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|
T Consensus 7 ~~~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~q 85 (528)
T 3p9d_D 7 SNATFKNKEKP-QEVRKANIIAARSVADAIRTSLGPKGMDKMIKTSRGEIIISNDGHTILKQMAILHPVARMLVEVSAAQ 85 (528)
T ss_dssp CCCSSCBCCCH-HHHHHHHHHHHHHHHHHHTTTSSTTCCCEEEECSSCCEEEECCHHHHHHHSCCCCTTHHHHHHHHHHH
T ss_pred cccccchhcch-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCeEEECCHHHHHHHcccCCHHHHHHHHHHHHh
Confidence 34556666667 59999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhccc
Q 009026 93 QEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASK 172 (546)
Q Consensus 93 ~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~sk 172 (546)
++++||||||++|||++||+++.+++.+|+||..|++||+.|++.++++|++++.+ ++..|++.|.++++|+++||
T Consensus 86 d~e~GDGTTtvvVLA~~Ll~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~----v~~~~~e~l~~va~tsl~sK 161 (528)
T 3p9d_D 86 DSEAGDGTTSVVILTGALLGAAERLLNKGIHPTIIADSFQSAAKRSVDILLEMCHK----VSLSDREQLVRAASTSLSSK 161 (528)
T ss_dssp HHHTCSCSHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHTTCCC----CCSCCHHHHHHHHHHHSCSS
T ss_pred hhhhCCChhhHHHHHHHHHHHHHHHHHCCCChHHHHHHHHHHHHHHHHHHHHhhCC----CCCCCHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999999999999999875 35568999999999999999
Q ss_pred c-cCchhhHHHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccceeEeeEEEeccCC--C-CcccccCceEEEEEeec
Q 009026 173 Q-FGQEEILCPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--G-SIKNMEKAKVAVFAGGV 248 (546)
Q Consensus 173 ~-~~~~~~ls~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~--~-~~~~i~n~kI~ll~~~l 248 (546)
+ ..++++|++++++|+.++++.....+++++|+|++++||+++||++++|++|++++. . ||++++||||++++++|
T Consensus 162 ~~~~~~~~i~~livdAv~~V~~~~~~~i~v~~I~I~k~~Gg~~~ds~lv~G~v~dk~~~~~~~m~~~ien~kIll~~~~l 241 (528)
T 3p9d_D 162 IVSQYSSFLAPLAVDSVLKISDENSKNVDLNDIRLVKKVGGTIDDTEMIDGVVLTQTAIKSAGGPTRKEKAKIGLIQFQI 241 (528)
T ss_dssp SCSTTHHHHHHHHHHHHHTTCCTTTTCCCGGGSBCCCCCSSCSCCCEEESSCBCCCCCCCSSSCCSEESSEEEEEECCCS
T ss_pred ccchhHHHHHHHHHHHHHHhccccCCccceEEEEEEEecCCCccceEEEeeeEEeecccCcccCcccccCceEEEEeccc
Confidence 5 457999999999999999863223589999999999999999999999999999983 4 89999999999999999
Q ss_pred ccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcc-----cHHHHHHHHHCCeEEEEecCHHHH
Q 009026 249 DTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAV-----GEMALHFCERYKLMVLKISSKFEL 323 (546)
Q Consensus 249 ~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i-----~~~~~~~l~~~~I~vv~~v~~~~l 323 (546)
++++++.++++.+++++++..+.++|++++++++++|.+.|++|||++++| ++.+++||.++||++++++++++|
T Consensus 242 e~~k~~~~~~i~i~~~~~~~~~~~~E~~~l~~~le~I~~~g~~vvi~~~~I~~~a~~~~al~~L~~~~I~av~~~~k~~l 321 (528)
T 3p9d_D 242 SPPKPDTENNIIVNDYRQMDKILKEERAYLLNICKKIKKAKCNVLLIQKSILRDAVNDLALHFLSKLNIMVVKDIEREEI 321 (528)
T ss_dssp SCCCCSSEEEEEESSSSHHHHHTHHHHHHHHHHHHHHHHTTCCEEEESSCSCTTSCSCHHHHHHTTTSCCEEECCCTHHH
T ss_pred cccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCCcccccCCHHHHHHHHHcCcEEEEeCCHHHH
Confidence 999999999999999999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHhCCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEecC--CCCceEEEEEeCCCHHHHHHHHHHHHHHHHHH
Q 009026 324 RRFCRTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEG--GGNSVSTVVLRGSTDSILDDLERAVDDGVNTY 401 (546)
Q Consensus 324 ~~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~--~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l 401 (546)
+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|+ +.+++|||+|||+|+.+++|.||+++||++++
T Consensus 322 e~ia~~tGa~ii~~~~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~~~~~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~ 401 (528)
T 3p9d_D 322 EFLSKGLGCKPIADIELFTEDRLDSADLVEEIDSDGSKIVRVTGIRNNNARPTVSVVIRGANNMIIDETERSLHDALCVI 401 (528)
T ss_dssp HHHHHHHTCCCCSCSTTCCSSSEEEESCEECCEETTEECCBCTTBCCGGGCCCCEEECCCSSTTHHHHHHHHHTTTHHHH
T ss_pred HHHHHHHCCEEecccccCCHHHCCcccEEEEEEECCEEEEEEEcccccCCCceEEEEEcCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999986 22689999999999999999999999999999
Q ss_pred HHHhhCCeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCcee
Q 009026 402 KAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVG 481 (546)
Q Consensus 402 ~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~G 481 (546)
|+++++|++|||||++|++++.+|++++.+.++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+++.++|
T Consensus 402 r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G 481 (528)
T 3p9d_D 402 RCLVKERGLIAGGGAPEIEISRRLSKEARSMEGVQAFIWQEFASALEVIPTTLAENAGLNSIKVVTELRSKHENGELNDG 481 (528)
T ss_dssp HHHHHSSCEEETTTHHHHHHHHHHHHCCTTSCHHHHTTHHHHHHHHTHHHHHHHHTTSSCHHHHHHHHTTCCCSSSCCCC
T ss_pred HHHHhcCCccCCCCHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhccCCccc
Confidence 99999999999999999999999999988889999999999999999999999999999999999999999877778899
Q ss_pred EeccCCcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcC
Q 009026 482 IDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAK 528 (546)
Q Consensus 482 id~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~ 528 (546)
+|+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|.++
T Consensus 482 ~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~ 528 (528)
T 3p9d_D 482 ISVRRSGTTNTYEEHILQPVLVSTSAITLASECVKSILRIDDIAFSR 528 (528)
T ss_dssp CCSSSSSCCCHHHHCCEEEHHHHHHHHHHHHHHHHHHHHCSCCCBCC
T ss_pred eecCCCCccchHhccCeecHHHHHHHHHHHHHHHHHHHhhhHheecC
Confidence 99999999999999999999999999999999999999999999764
No 18
>3p9d_E T-complex protein 1 subunit epsilon; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_e* 4d8q_E* 4d8r_e*
Probab=100.00 E-value=4e-109 Score=898.71 Aligned_cols=508 Identities=27% Similarity=0.440 Sum_probs=477.3
Q ss_pred ccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHHHhhhhhCC
Q 009026 19 KHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGD 98 (546)
Q Consensus 19 ~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GD 98 (546)
...+| .+++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|++++||
T Consensus 39 ~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GD 117 (562)
T 3p9d_E 39 KRQHG-LEAKKSHILAARSVASIIKTSLGPRGLDKILISPDGEITITNDGATILSQMELDNEIAKLLVQLSKSQDDEIGD 117 (562)
T ss_dssp SCSHH-HHHHHHHHHHHHHHHHHTTTSSSTTCCEEEEECSSSCEEEESCHHHHHHHSCCCSHHHHHHHHHHHHHHHHTSS
T ss_pred eecch-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCEEEECCHHHHHHHccCCCHHHHHHHHHHHHHHhhcCC
Confidence 33345 69999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCC--HHHHHHHHHhhhccccc-C
Q 009026 99 GANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRN--TEEVIYRMKAAVASKQF-G 175 (546)
Q Consensus 99 Gttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~--~~~l~~i~~t~l~sk~~-~ 175 (546)
||||++|||++||+++.+++.+|+||..|++||+.|++.++++|++++.+.-. +..| ++.|.++++|+++||+. .
T Consensus 118 GTTtvvVLA~~LL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v~~--~~~~~~~e~L~~vA~tSl~sK~i~~ 195 (562)
T 3p9d_E 118 GTTGVVVLASALLDQALELIQKGIHPIKIANGFDEAAKLAISKLEETCDDISA--SNDELFRDFLLRAAKTSLGSKIVSK 195 (562)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHTTTTTSSSSB--CCCSSCHHHHHHHHHHHHSSSTTTT
T ss_pred CcccHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccCcCC--CcchhhHHHHHHHHHHhcCCchhHH
Confidence 99999999999999999999999999999999999999999999999875211 1122 38899999999999964 4
Q ss_pred chhhHHHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccceeEeeEEEeccCC--CCcccc------cCceEEEEEee
Q 009026 176 QEEILCPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNM------EKAKVAVFAGG 247 (546)
Q Consensus 176 ~~~~ls~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~--~~~~~i------~n~kI~ll~~~ 247 (546)
+.++|++++++|+..+.+...+++|+++|+|+++.||+++||++++|++|++++. +||+.+ +|+||++++||
T Consensus 196 ~~d~la~l~vdAV~~V~~~~~~~~d~~~I~I~k~~Ggs~~ds~lveGmv~dk~~~sp~m~~~~~~~~~~~~~kIall~~~ 275 (562)
T 3p9d_E 196 DHDRFAEMAVEAVINVMDKDRKDVDFDLIKMQGRVGGSISDSKLINGVILDKDFSHPQMPKCVLPKEGSDGVKLAILTCP 275 (562)
T ss_dssp THHHHHHHHHHHHHTSSTTTCSCCCCCCCEEEEESSSCGGGCEEESSEEESSCCCTTSCCC-----TTCSSCEECEEESC
T ss_pred HHHHHHHHHHHHheeecccccCCCCcccEEEEEecCCChhhhceeeeEEEecCCCCCCcCcccccccccccceEEEeccc
Confidence 7899999999999999764334688999999999999999999999999999984 688888 89999999999
Q ss_pred cccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHH
Q 009026 248 VDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFC 327 (546)
Q Consensus 248 l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia 327 (546)
|++.+++.++++.+++++++..+.++|++++++++++|++.|++|||++++|++.+++||.++||++++++++++|+|||
T Consensus 276 le~~k~~~~~~~~Iss~~~~~~~~~~E~~~l~~~lekI~~~g~~vvI~~~~I~~~Al~~L~~~~I~~v~~v~k~~le~ia 355 (562)
T 3p9d_E 276 FEPPKPKTKHKLDISSVEEYQKLQTYEQDKFKEMIDDVKKAGADVVICQWGFDDEANHLLLQNDLPAVRWVGGQELEHIA 355 (562)
T ss_dssp CSSCCCSSCCCCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHTCSCCEECSSCCSHHHHHHHTTTCCCEECCCTTTHHHHH
T ss_pred ccccccccCceEEECCHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCHHHHHHHHHCCCEEEeccCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhCCeeccccCCCCCCCcccceeEEEEEECC--eEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHh
Q 009026 328 RTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGG--ARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMC 405 (546)
Q Consensus 328 ~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~--~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~ 405 (546)
++|||++++++++++++++|+|+.|++.++|+ ++|++|++|+ .++.|||+|||+|+.+++|.||+++||++++|+++
T Consensus 356 ~~TGa~iis~l~~l~~~~LG~a~~v~~~~ig~~~~~~~~i~g~~-~~~~~TIllrG~te~~l~E~kr~i~DAL~~~r~av 434 (562)
T 3p9d_E 356 ISTNGRIVPRFQDLSKDKLGTCSRIYEQEFGTTKDRMLIIEQSK-ETKTVTCFVRGSNKMIVDEAERALHDSLCVVRNLV 434 (562)
T ss_dssp HHHCCCEEESSSCCCTTSCEECSCEEEECCSSSSCCEEEECCCS-CCSCCEEEEECTTTTTHHHHTHHHHHHHHHHHHHH
T ss_pred HHhCCEEEeccccCCHHHCCcceEEEEEEeccCCceEEEEecCC-CCCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999995 8999999997 48899999999999999999999999999999999
Q ss_pred hCCeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhc-CCCceeEec
Q 009026 406 RDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHAS-GKTKVGIDL 484 (546)
Q Consensus 406 ~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~-~~~~~Gid~ 484 (546)
++|++|||||++|++++.+|++++.+.++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+ ++.++|+|+
T Consensus 435 ~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~~G~d~ 514 (562)
T 3p9d_E 435 KDSRVVYGGGAAEVTMSLAVSEEADKQRGIDQYAFRGFAQALDTIPMTLAENSGLDPIGTLSTLKSKQLKEKISNIGVDC 514 (562)
T ss_dssp HSCCEEETTTHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTHHHHHHHHTTTSCHHHHHHHHHHHHHHTTTSSBCCBT
T ss_pred hCCCcCCCCcHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHhhcCCCceeEec
Confidence 9999999999999999999999998899999999999999999999999999999999999999999975 457899999
Q ss_pred cCCcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcCCC
Q 009026 485 ENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPA 530 (546)
Q Consensus 485 ~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~ 530 (546)
.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|.+++.
T Consensus 515 ~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~ii~~~~~ 560 (562)
T 3p9d_E 515 LGYGSNDMKELFVVDPFIGKKQQILLATQLCRMILKIDNVIISGKD 560 (562)
T ss_dssp TTTBCCBTTTTTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEECCC-
T ss_pred CCCcccchHhccCEEcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 9999999999999999999999999999999999999999987654
No 19
>3p9d_C T-complex protein 1 subunit gamma; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_c* 4d8q_C* 4d8r_c* 2bbm_B 2bbn_B
Probab=100.00 E-value=1.1e-109 Score=902.31 Aligned_cols=515 Identities=28% Similarity=0.476 Sum_probs=483.3
Q ss_pred cccccccccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHH
Q 009026 10 IQSMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAG 89 (546)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~ 89 (546)
...+++++.+..+| .+++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|
T Consensus 4 ~~~~~~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~~~hP~Akll~e~a 82 (590)
T 3p9d_C 4 PVVFMNASQERTTG-RQAQISNITAAKAVADVIRTCLGPKAMLKMLLDPMGGLVLTNDGHAILREIDVAHPAAKSMLELS 82 (590)
T ss_dssp --CCSCTTCCBCTT-HHHHHTTHHHHHHHHHHSTTTCSSSCCCCEEECTTTCCBCCCCHHHHHHHSCCCCHHHHTHHHHT
T ss_pred CeEeecCCcchhhH-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECCHHHHHHHhhCCCHHHHHHHHHH
Confidence 45678999988888 59999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhCCCchhHHHHHHHHHHHHHHH-HHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhh
Q 009026 90 KAQQEEIGDGANLTISFAGEILQGAEEL-IRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAA 168 (546)
Q Consensus 90 ~~~~~~~GDGttt~vlL~~~Ll~~~~~l-i~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~ 168 (546)
++|++++||||||++|||++||+++.+| +.+|+||..|++||+.|++.++++|++++.+ ++..|++.|.++++|+
T Consensus 83 ~~qd~e~GDGTTtvvVLA~eLL~~a~~l~l~~GihP~~I~~G~~~A~~~a~~~L~~~s~~----v~~~~~e~L~~vA~ts 158 (590)
T 3p9d_C 83 RTQDEEVGDGTTTVIILAGEILAQCAPYLIEKNIHPVIIIQALKKALTDALEVIKQVSKP----VDVENDAAMKKLIQAS 158 (590)
T ss_dssp TTHHHHCSSCHHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHCCT----TTTCCTHHHHHHHTTT
T ss_pred HhhhhhhCCCccchHHHHHHHHhhhHHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHhhc----cccCCHHHHHHHHHHH
Confidence 9999999999999999999999999999 9999999999999999999999999999875 3566789999999999
Q ss_pred hcccc-cCchhhHHHHHHHHHHHhcCCCCC--------ccccc-chhhhhcCCCCcccceeEeeEEEeccCC--CCcccc
Q 009026 169 VASKQ-FGQEEILCPLIADACIQVCPKNPA--------NFNVD-NVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNM 236 (546)
Q Consensus 169 l~sk~-~~~~~~ls~lv~~a~~~v~~~~~~--------~~~~~-~I~i~k~~Gg~~~dS~li~Giv~~~~~~--~~~~~i 236 (546)
++||+ .+++++|++++++|+.++++++.. ++|++ +|+|++++||++.||++++|++|++++. .||+++
T Consensus 159 lsSK~~~~~~~~i~~livdAv~~V~~~~~~~~~~~~~~~vDl~~~I~I~ki~Ggs~~ds~lv~Gmvfdk~~~~~~m~~~~ 238 (590)
T 3p9d_C 159 IGTKYVIHWSEKMCELALDAVKTVRKDLGQTVEGEPNFEIDIKRYVRVEKIPGGDVLDSRVLKGVLLNKDVVHPKMSRHI 238 (590)
T ss_dssp STTSTTGGGHHHHHHHHHHHHTTSTTCC-----------CCCSSSSCEEEESSCCGGGCBCCSSEEECCCCSCTTSCSCE
T ss_pred HhcccccccHHHHHHHHHHHHHHhcccccCccccccccccchhhceEEEEecCCCcccceeeeEEEEecccCCCCCccee
Confidence 99996 457899999999999999865421 24444 6999999999999999999999999874 689999
Q ss_pred cCceEEEEEeecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEE
Q 009026 237 EKAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLK 316 (546)
Q Consensus 237 ~n~kI~ll~~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~ 316 (546)
+||||++++++|++++++.++++.+++++++..+.+.|++++++++++|++.|++|||++++|++++++||.++||++|+
T Consensus 239 en~kIll~d~~Le~~K~e~~~~v~Is~~~~l~~il~~E~~~l~~~vekI~~~g~~vII~e~~I~d~Al~~L~k~~I~av~ 318 (590)
T 3p9d_C 239 ENPRVVLLDCPLEYKKGESQTNIEIEKEEDWNRILQIEEEQVQLMCEQILAVRPTLVITEKGVSDLAQHYLLKGGCSVLR 318 (590)
T ss_dssp ESCCEECCCCCCSCCCCTTTEECCBCSTTHHHHHHHHHHHHHHHHHHHHHTTCCSEECCSSCCCTHHHHHHHHTTCCCCC
T ss_pred eeeEEEEEcccccccccccCceEEeCCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEecCCcCHHHHHHHHhccceeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCHHHHHHHHHHhCCeeccccCCCCCCCccc-ceeEEEEEECCeEEEEEEecCCCCce---------------------
Q 009026 317 ISSKFELRRFCRTTGAVAMLKLCQPNPDDLGY-VDSVSVEEIGGARVTIVRNEGGGNSV--------------------- 374 (546)
Q Consensus 317 ~v~~~~l~~ia~~tGa~ii~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~~~~~~~~--------------------- 374 (546)
++++.+|+|||++|||++++++++++++++|+ |+.|++.++|+++|++|++|++ +..
T Consensus 319 ~~~k~~le~ia~~TGa~iis~l~~~~~~~LG~~a~~v~~~~ig~d~~~~i~g~~~-~~~~~~~~~~~~~~~~~k~~~~~~ 397 (590)
T 3p9d_C 319 RVKKSDNNRIARVTGATIVNRVEDLKESDVGTNCGLFKVEMIGDEYFSFLDNCKE-PGSGSGWSHPQFEKGSGKRRWKKN 397 (590)
T ss_dssp CCCHHHHHHHHHHHTCCCCSCSTTCCTTSCBCCCSEEECCEETTEECEEECC----------------------------
T ss_pred cCCHHHHHHHHHHhCCceeecccCCCHHHhCCcCCEEEEEEEcCcEEEEEeCCCC-ccccccccccccccccchhhhhcc
Confidence 99999999999999999999999999999999 9999999999999999999863 444
Q ss_pred -----------------------------------EEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCHHHH
Q 009026 375 -----------------------------------STVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEI 419 (546)
Q Consensus 375 -----------------------------------~TIll~G~~~~~l~e~~r~~~dal~~l~~~~~~~~vvpGGG~~E~ 419 (546)
|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|+
T Consensus 398 ~~~~~i~~r~~~i~~~~~~~~~~~~~~~~~l~ggv~tI~lrg~te~~l~E~kr~i~DAl~a~r~av~~~~iVpGGGa~e~ 477 (590)
T 3p9d_C 398 FIAVSAANRFKKISSSGALGSGHHHHHHHHGSGKACTIMLRGGSKDILNEIDRNLQDAMAVARNVMLSPSLSPGGGATEM 477 (590)
T ss_dssp ------------------------------CCCSCCCEEEECSSTTTHHHHHHHHHHHHHHHHHHHHCCCEECTTTHHHH
T ss_pred hhhHHHHHHHHHHHHHHhccCCHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHHHHHHHHHHHHHHhcCCEEeCccHHHH
Confidence 999999999999999999999999999999999889999999999
Q ss_pred HHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEeccCCcccccccCcccc
Q 009026 420 ELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCADISTMNVWD 499 (546)
Q Consensus 420 ~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~~~g~i~d~~~~gi~d 499 (546)
+++.+|++++...++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+++.++|||+.+|++.||++.||||
T Consensus 478 ~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d~~~g~~~dm~~~gI~d 557 (590)
T 3p9d_C 478 AVSVKLAEKAKQLEGIQQWPYQAVADAMECIPRTLIQNAGGDPIRLLSQLRAKHAQGNFTTGIDGDKGKIVDMVSYGIWE 557 (590)
T ss_dssp HHHHHHHHHHHHSCSTTHHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHTTSCTTCBCCTTSSSCBCTTTTTCCE
T ss_pred HHHHHHHHHhhcCChHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEeEeCCCCeEeehHHcCCeE
Confidence 99999999988899999999999999999999999999999999999999999987778899999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHhchhhhhhcCCC
Q 009026 500 LYVTKFFALKYAADAACTVLRVDQIIMAKPA 530 (546)
Q Consensus 500 p~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~ 530 (546)
|+.||+++|+.|+|+|++|||||++|...|.
T Consensus 558 p~~vk~~al~~A~e~a~~iL~id~ii~~~~~ 588 (590)
T 3p9d_C 558 PEVIKQQSVKTAIESACLLLRVDDIVSGVRK 588 (590)
T ss_dssp EHHHHHHHHHHHHHHHHHTTSEEEEECCCC-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 9999999999999999999999999987653
No 20
>3p9d_F T-complex protein 1 subunit zeta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_f* 4d8q_F* 4d8r_f*
Probab=100.00 E-value=1.4e-109 Score=901.23 Aligned_cols=518 Identities=25% Similarity=0.407 Sum_probs=484.6
Q ss_pred ccccccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHHHh
Q 009026 13 MLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQ 92 (546)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~ 92 (546)
+++++.+..+| .+++..||.||++|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+|+|++++|++|
T Consensus 5 ~~~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~G~~~iTnDG~tIlk~i~v~hP~akll~e~a~~q 83 (546)
T 3p9d_F 5 LLNPKAESLRR-DAALKVNVTSAEGLQSVLETNLGPKGTLKMLVDGAGNIKLTKDGKVLLTEMQIQSPTAVLIARAAAAQ 83 (546)
T ss_dssp SSCTTEEEEEH-HHHHHHHHHHHTHHHHHHTTTSSTTCCEEEEECTTSCEEEECCHHHHHHTSCCCCHHHHHHHHHHHHH
T ss_pred ccCCCcchhhH-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCEEEECCHHHHHHHccCcCHHHHHHHHHHHHH
Confidence 34566667677 59999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhccc
Q 009026 93 QEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASK 172 (546)
Q Consensus 93 ~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~sk 172 (546)
++++||||||++|||++||+++.+++.+|+||..|++||++|++.++++|++++++... +..|++.|.++++|+++||
T Consensus 84 d~e~GDGTTtvvVLA~eLL~~a~~li~~GihP~~I~~G~~~A~~~a~~~L~~~a~~v~~--~~~~~~~L~~vA~tsl~sK 161 (546)
T 3p9d_F 84 DEITGDGTTTVVCLVGELLRQAHRFIQEGVHPRIITDGFEIARKESMKFLDEFKISKTN--LSNDREFLLQVARSSLLTK 161 (546)
T ss_dssp HHHCSSCHHHHHHHHHHHHHHHHHHTTTTBCHHHHHHHHHHHHHHHHHHHHHHCCCCSS--SSTTCHHHHHHHHHHTCST
T ss_pred HHHhCCCcccHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHhhccccc--cccCHHHHHHHHHHHhCCC
Confidence 99999999999999999999999999999999999999999999999999999886211 2367899999999999999
Q ss_pred cc-CchhhHHHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccceeEeeEEEeccCC--CCcccccCceEEEEEeecc
Q 009026 173 QF-GQEEILCPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFAGGVD 249 (546)
Q Consensus 173 ~~-~~~~~ls~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~--~~~~~i~n~kI~ll~~~l~ 249 (546)
+. .+.++|++++++|+..+.+.....+|+++|+|++++||+..||++++|++|++++. .||++++||||++++|+|+
T Consensus 162 i~~~~~d~la~l~vdaV~~V~~~~~~~~dl~~I~i~ki~Gg~~~ds~lv~G~v~dk~~~~~~m~~~~en~kIll~~~~Le 241 (546)
T 3p9d_F 162 VDADLTEVLTPIVTDAVLSVYDAQADNLDLHMVEIMQMQHLSPKDTTFIKGLVLDHGGRHPDMPTRVKNAYVLILNVSLE 241 (546)
T ss_dssp THHHHCSSHHHHHHHHHHHTHHHHHTTCCGGGEEEECCCCSCTTTCCCCSSCEESCCCCSSSSCSSBCSCCCCEECCCSS
T ss_pred cchhHHHHHHHHHHHhheEeecCCCCcccchheEEEEecCCCccccEEEeeEEEecccccccCcceecCceEEEecCccc
Confidence 64 46889999999999998642222588999999999999999999999999998873 6899999999999999999
Q ss_pred cccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcEEEeCCcccHHHHHHHHHCCeEEEEecC
Q 009026 250 TSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESG----------AEVIVSGAAVGEMALHFCERYKLMVLKISS 319 (546)
Q Consensus 250 ~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~----------v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~ 319 (546)
+++++.++++.+++++++..+.++|++++++++++|...+ ++|||++++|++.+++||.++||+++++++
T Consensus 242 ~~k~e~~~~~~i~~~~~~~~~~~~E~~~~~~~v~~I~~~~~~v~~~~~g~~~vIi~~k~I~~~Al~~L~~~gI~~vr~v~ 321 (546)
T 3p9d_F 242 YEKTEVNSGFFYSSADQRDKLAASERKFVDAKLKKIIDLKNEVCGMDPDKGFVIINQKGIDPMSLDVFAKHNILALRRAK 321 (546)
T ss_dssp SCCCSSCBCCCCCSSSCHHHHHHHHHHHHHHHHHHHHHCC-----------CEEEESSCCCHHHHHHHTTTTCEEECCCC
T ss_pred ccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCceEEEecCcCcHHHHHHHHHCCCeeEecCC
Confidence 9999999999999999999999999999999999998764 249999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHH
Q 009026 320 KFELRRFCRTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVN 399 (546)
Q Consensus 320 ~~~l~~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~ 399 (546)
+++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|+ .+..|||+|||+|+.+++|.||+++||++
T Consensus 322 ~~~leria~~tGa~ii~~l~~l~~~~LG~a~~v~~~~ig~~~~~~i~g~~-~~~~~tI~lrG~te~~l~E~kr~l~DAl~ 400 (546)
T 3p9d_F 322 RRNMERLQLVTGGEAQNSVEDLSPQILGFSGLVYQETIGEEKFTYVTENT-DPKSCTILIKGSTHYALAQTKDAVRDGLR 400 (546)
T ss_dssp HHHHHHHHHTTTBCCCCCCSSCSTTCCBCCCCBCBCCCSSCCCEECSSCS-CCSCEEEECCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEecchhhCCHhHCCcccEEEEEEecCceEEEEecCC-CCceEEEEECCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999997 48899999999999999999999999999
Q ss_pred HHHHHhhCCeeecCCCHHHHHHHHHHHH---HhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhc-
Q 009026 400 TYKAMCRDSRIVPGAAATEIELARRLKE---FSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHAS- 475 (546)
Q Consensus 400 ~l~~~~~~~~vvpGGG~~E~~la~~L~~---~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~- 475 (546)
++|+++++|++|||||++|++++.+|++ ++...++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+
T Consensus 401 ~~r~av~~~~iVpGGGa~e~~~s~~L~~~~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~~v~~l~~~h~~~ 480 (546)
T 3p9d_F 401 AVANVLKDKNIIPGAGAFYIALSRYLRSANMNKLGAKGKTKTGIEAFAEALLVIPKTLVKNSGFDPLDVLAMVEDELDDA 480 (546)
T ss_dssp HHHHHTTSCCEEETTTHHHHHHHHHHHHHHTTTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHH
T ss_pred HHHHHhcCCcEEeCCCHHHHHHHHHHHhhhhhhhcCchHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999998 588889999999999999999999999999999999999999999873
Q ss_pred ----CCCceeEeccCCcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCCCCC
Q 009026 476 ----GKTKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAGGPR 534 (546)
Q Consensus 476 ----~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~~~~ 534 (546)
++.++|||+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|.+++.++..
T Consensus 481 ~~~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~~~a~~iL~iD~ii~~~~~~~~~ 543 (546)
T 3p9d_F 481 QDSDETRYVGVDLNIGDSCDPTIEGIWDSYRVLRNAITGATGIASNLLLCDELLRAGRSTLKE 543 (546)
T ss_dssp TTSTTSSCCCCBTTTTBCCCSGGGTCEEEHHHHHHHHHHHHHHHHHHHTEEEEEEECCSSCCC
T ss_pred hcccCCceeeEeCCCCeecchHhccCEecHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCC
Confidence 44679999999999999999999999999999999999999999999999998775543
No 21
>3p9d_B T-complex protein 1 subunit beta; HSP60, eukaryotic chaperonin, actin/tubulin binding, hexadec chaperone; HET: ADP; 3.80A {Saccharomyces cerevisiae} PDB: 3p9e_b* 4d8q_B* 4d8r_b*
Probab=100.00 E-value=1.9e-108 Score=889.64 Aligned_cols=510 Identities=25% Similarity=0.414 Sum_probs=481.2
Q ss_pred cccccccccccChHHHHHHHHHHHHHHHHhhhhcCCCCCccceeEc-CCCCEEEecCHHHHHHhccccChHHHHHHHHHH
Q 009026 12 SMLKEGHKHMSGLDEAVLKNIDACKQLSTITRTSLGPNGMNKMVIN-HLDKLFVTNDAATIVNELEVQHPAAKLLVLAGK 90 (546)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~-~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~ 90 (546)
.+|+++.+..+| ++++.+|+.||+.|+++|+|||||+||+|||++ +.|+++|||||+|||++|+++||+|+|++++|+
T Consensus 4 ~~l~~~~~~~~g-~~a~~~ni~a~~~la~~vkttLGPkG~~kml~~~~~G~~~iTnDG~tIlk~i~~~hP~Akll~e~a~ 82 (527)
T 3p9d_B 4 QIFGDQVTEERA-ENARLSAFVGAIAVGDLVKSTLGPKGMDKLLQSASSNTCMVTNDGATILKSIPLDNPAAKVLVNISK 82 (527)
T ss_dssp CSSCSCEEEEES-HHHHHHHHHHHHHHHHHHHSCSSSSCCEEEEECTTTCCEECCCCHHHHHHTCCCCCHHHHHHHHHHH
T ss_pred ehhcCcchhhhh-HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEecCCCCeEEeCCHHHHHHHhccCCHHHHHHHHHHH
Confidence 357888888888 599999999999999999999999999999999 899999999999999999999999999999999
Q ss_pred HhhhhhCCCchhHHHHHHHHHHHHHHHHHc-CCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCC---HHHHHHHHH
Q 009026 91 AQQEEIGDGANLTISFAGEILQGAEELIRM-GLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRN---TEEVIYRMK 166 (546)
Q Consensus 91 ~~~~~~GDGttt~vlL~~~Ll~~~~~li~~-gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~---~~~l~~i~~ 166 (546)
+|++++||||||++|||++||+++.+++.+ |+||..|++||++|.+.++++|++++.+. +..+ ++.|.++++
T Consensus 83 ~qd~~~GDGTTtavVLA~~Ll~ea~~lv~~~GihP~~I~~G~~~A~~~a~~~L~~~s~~v----~~~~~~~~~~l~~vA~ 158 (527)
T 3p9d_B 83 VQDDEVGDGTTSVTVLSAELLREAEKLIDQSKIHPQTIIEGYRLASAAALDALTKAAVDN----SHDKTMFREDLIHIAK 158 (527)
T ss_dssp HHHHHTCSCTTTTTHHHHHHHHHHHHHTC---CCHHHHHHHHHHHHHHHHHHHHHTCBCC----CCCHHHHHHHHHHHHH
T ss_pred HhHhhhCCcHhHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhCccC----CCcchhhHHHHHHHHH
Confidence 999999999999999999999999999999 99999999999999999999999998752 2222 789999999
Q ss_pred hhhcccc-cCchhhHHHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccceeEeeEEEeccCCC-CcccccCceEEEE
Q 009026 167 AAVASKQ-FGQEEILCPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAVG-SIKNMEKAKVAVF 244 (546)
Q Consensus 167 t~l~sk~-~~~~~~ls~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~~-~~~~i~n~kI~ll 244 (546)
|+++||+ ..++++|++++++|+.++++++ |++.|+|.++.||++.||++++|++|++++.+ +|++++||||+++
T Consensus 159 tSl~sK~~~~~~~~i~~li~dAv~~V~~~~----~~~~I~V~k~~gg~~~ds~lv~G~~~dk~~~~~~p~~~~n~kIlll 234 (527)
T 3p9d_B 159 TTLSSKILSQDKDHFAELATNAILRLKGST----NLEHIQIIKILGGKLSDSFLDEGFILAKKFGNNQPKRIENAKILIA 234 (527)
T ss_dssp HHHTTSGGGGGHHHHHHHHHHHHHTTCTTC----CTTSSCCCBCCCSSSSCCCEESSCCCSCCCSSSCCSCCSSCEEEEE
T ss_pred hccccCcccchHHHHHHHHHHHHHHhcccC----CcceEEEEEcCCCCccccEEEEeEEEecccCCCCCeeeecceEEEe
Confidence 9999996 4568999999999999998653 56789999999999999999999999999854 3889999999999
Q ss_pred Eeeccccccc-ccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHH
Q 009026 245 AGGVDTSATE-TKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFEL 323 (546)
Q Consensus 245 ~~~l~~~~~~-~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l 323 (546)
+|+|++++++ +++++.+++++++..+.++|++++++++++|.+.|++|||++++|++.+++||.++||++++++++.+|
T Consensus 235 ~~~le~~k~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~l~~I~~~g~~vvi~~~~I~~~al~~L~~~~i~av~~~~~~dl 314 (527)
T 3p9d_B 235 NTTLDTDKVKIFGTKFKVDSTAKLAQLEKAEREKMKNKIAKISKFGINTFINRQLIYDYPEQLFTDLGINSIEHADFEGV 314 (527)
T ss_dssp CSCSSCCCCSSCCCBCCCCHHHHHHHHHHHHHHHHHHHHHHHTTTCCBEEESSCCCTTTHHHHHHHTCBCCCCCCHHHHH
T ss_pred ccccccccccccCceEEEcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHCCCEEEecCCHHHH
Confidence 9999999998 688999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEecCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHH
Q 009026 324 RRFCRTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKA 403 (546)
Q Consensus 324 ~~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~ 403 (546)
+|||++|||++++++++++++++|+|+.|++.++|+++|++|++|+ .+++|||+|||+|+.+++|.||+++||++++|+
T Consensus 315 e~ia~~tGa~iv~~~~~~~~~~LG~a~~v~~~~ig~~~~~~~~g~~-~~~~~tI~lrg~te~~l~E~kr~i~DAl~~~r~ 393 (527)
T 3p9d_B 315 ERLALVTGGEVVSTFDEPSKCKLGECDVIEEIMLGEQPFLKFSGCK-AGEACTIVLRGATDQTLDEAERSLHDALSVLSQ 393 (527)
T ss_dssp HHHHHHTCCCCCSTTSCCTTSCEECSBCCBCCCSSSCCBCCBCSSC-CSCCEECBCCTTCTTHHHHHHTHHHHHHHHHHH
T ss_pred HHHHHHhCCEEecchhhCCHHHCCCCcEEEEEEecceEEEEEECCC-CCCEEEEEEcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999997 488999999999999999999999999999999
Q ss_pred HhhCCeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEe
Q 009026 404 MCRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGID 483 (546)
Q Consensus 404 ~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid 483 (546)
++++|++|||||++|++++.+|++++...++++|+++++||+|||.||++|++|||+|+.+++.+|++.|.+++.++|||
T Consensus 394 av~~g~iVpGGGa~e~~~s~~L~~~~~~~~g~eq~~i~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h~~~~~~~G~d 473 (527)
T 3p9d_B 394 TTKETRTVLGGGCAEMVMSKAVDTEAQNIDGKKSLAVEAFARALRQLPTILADNAGFDSSELVSKLRSSIYNGISTSGLD 473 (527)
T ss_dssp HHHCCCEEETTTHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHTSCSHHHHHHHHHHHHHTCSCCCCC
T ss_pred HHhcCCcccCCcHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhcCCCceeEE
Confidence 99999999999999999999999998888999999999999999999999999999999999999999998777889999
Q ss_pred ccCCcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhcCCCC
Q 009026 484 LENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMAKPAG 531 (546)
Q Consensus 484 ~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~~~~~ 531 (546)
+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|..+|+.
T Consensus 474 ~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~id~ii~~~~~~ 521 (527)
T 3p9d_B 474 LNNGTIADMRQLGIVESYKLKRAVVSSASEAAEVLLRVDNIIRARPRT 521 (527)
T ss_dssp SSSTTCCCHHHHTCEEETTHHHHHHHHHHHHHHHHHHCCEEEEEC---
T ss_pred CCCCCCcchHhccCEEcHHHHHHHHHHHHHHHHHHHhHHHHHhcCCcc
Confidence 999999999999999999999999999999999999999999988764
No 22
>3aq1_B Thermosome subunit; group II chaperonin, protein folding, chaperone; 2.75A {Methanococcoides burtonii}
Probab=100.00 E-value=8.1e-104 Score=847.63 Aligned_cols=486 Identities=29% Similarity=0.492 Sum_probs=380.5
Q ss_pred eeEcCCCCEEEecCHHHHHHhccccChHHHHHHHHHHHhhhhhCCCchhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Q 009026 54 MVINHLDKLFVTNDAATIVNELEVQHPAAKLLVLAGKAQQEEIGDGANLTISFAGEILQGAEELIRMGLHPSEIISGYTK 133 (546)
Q Consensus 54 mi~~~~g~~~iTnDg~tIl~~l~~~hP~a~ll~~~~~~~~~~~GDGttt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~ 133 (546)
||+++.|+++|||||+|||++|+++||+|||++++|++|++++||||||+++||++||+++.+++++|+||+.|++||++
T Consensus 1 mlv~~~G~~~iTnDG~tIlk~i~v~hP~Akll~e~a~~qd~e~GDGTTtvvvLa~~LL~~a~~ll~~GihP~~I~~G~~~ 80 (500)
T 3aq1_B 1 MLVDSMGDIVITNDGATILKEMDIQHPAAKMIVEVSKTQDAEVGDGTTTAAVLSGELLSKAEELIMKGVHSTIISEGYRH 80 (500)
T ss_dssp ------------------------------------------CCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHH
T ss_pred CccCCCCCeEEECcHHHHHHhCcCCCHHHHHHHHHHHhhhhhhCCChHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhccccc-CchhhHHHHHHHHHHHhcCC--CCCccc-ccchhhhhc
Q 009026 134 AINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQF-GQEEILCPLIADACIQVCPK--NPANFN-VDNVRVAKL 209 (546)
Q Consensus 134 a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~-~~~~~ls~lv~~a~~~v~~~--~~~~~~-~~~I~i~k~ 209 (546)
|++.++++|++++.+ ++..|++.|.++++|+++||+. +++++|++++++|+.+++++ +..++| +++|+|+++
T Consensus 81 A~~~a~~~L~~~s~~----v~~~d~~~l~~va~tsl~sKi~~~~~~~i~~li~dAv~~v~~~~~g~~~~di~~~I~V~k~ 156 (500)
T 3aq1_B 81 AAEKCREILETITIA----ISPDDEAALIKIAGTAITGKGAEAYKEKLSALTVKAVRSIVEEEEDGLKVNVLENIKIEKR 156 (500)
T ss_dssp HHHHHHHHHHHHCEE----CCTTCHHHHHHHHHTTCCSSSTTSSHHHHHHHHHHHHTTSEECCSSSCEECHHHHEEEEEE
T ss_pred HHHHHHHHHHHhcCC----CCCCcHHHHHHHHHHHhhcccccccHHHHHHHHHHHHHHhcccccCCccccccccEEEEEe
Confidence 999999999999886 2556799999999999999964 58999999999999999765 433577 788999999
Q ss_pred CCCCcccceeEeeEEEeccC--CCCcccccCceEEEEEeecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHh
Q 009026 210 LGGGLHNSTIVRGMVLKSDA--VGSIKNMEKAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAE 287 (546)
Q Consensus 210 ~Gg~~~dS~li~Giv~~~~~--~~~~~~i~n~kI~ll~~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~ 287 (546)
+||+++||++++|++|++++ .+||++++||||++++++|++++++.++++.++++++++.+.++|++++++++++|.+
T Consensus 157 ~G~~~~ds~lv~G~v~dk~~~~~~m~~~i~n~kIll~~~~Le~~k~e~~~~v~i~~~~~l~~~~~~E~~~l~~~le~I~~ 236 (500)
T 3aq1_B 157 AGGSIDDSELIDGLVIDKERSHPNMPEKVENAKILLLSCPVEFRKTEVDSEIKITSPGQMQLFLDQEEKMMREMAEKVIA 236 (500)
T ss_dssp ESSCGGGCEEESEEEESCCCSSTTSCSEEEEEEEEEESSCBCC-------------------------CHHHHHHHHHHT
T ss_pred cCCCccceEEEeeeEEeecCCCCCCcccccCCEEEEEeCCccccccccceeEeeCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998 4689999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHhCCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEe
Q 009026 288 SGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRN 367 (546)
Q Consensus 288 ~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~ 367 (546)
.|++|||++++|++.+++||.++||++++++++++|+|||++|||++++++++++++++|+|+.|++.++|+++|++|++
T Consensus 237 ~g~~lvi~~~~I~~~al~~L~~~~I~av~~~~k~~le~ia~~tGa~iis~l~~~~~~~LG~a~~v~~~~ig~~~~~~~~g 316 (500)
T 3aq1_B 237 SGANVVFCQKGIDDMAQYYIEKAGIYAVRRVKKSDLKRLSKVTGATIIQDLDQITTEDVGTAGLVEEKEVRGGKMTYVTG 316 (500)
T ss_dssp TCCSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHCCCCBSCTTCCCSTTCEEEEEEEEEECSSSEEEEEEE
T ss_pred hCcCEEEECCCcCHHHHHHHHHCCEEEEEeCCHHHHHHHHHHhCCeEecccccCCHhHCCCceEEEEEEecCeEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCHHHHHHHHHHHHHhccccchHHHHHHHHHHHh
Q 009026 368 EGGGNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIAKFAESF 447 (546)
Q Consensus 368 ~~~~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~~~a~aL 447 (546)
|+ .+++|||+|||+|+.+++|.||+++||++++|+++++|++|||||++|++++.+|++++.+.++++|+++++||+||
T Consensus 317 ~~-~~~~~TI~lrG~t~~~l~E~er~l~Dal~~~r~~~~~~~iVpGGGa~e~~~~~~L~~~~~~~~g~~q~~i~~~a~AL 395 (500)
T 3aq1_B 317 CQ-NSKAVTVLLHGGTEHVVDSLDHALNDALHVVGVVIEDGKVVVGGGSSEVELSLRLSEYASTLKGREQLAVSKFAEAL 395 (500)
T ss_dssp ET-TCCCEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHSEEEETTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHT
T ss_pred CC-CCceEEEEecCCcHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHhhhcCchHHHHHHHHHHHH
Confidence 97 48999999999999999999999999999999999999999999999999999999999888999999999999999
Q ss_pred hHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEeccCCcccccccCccccchHHHHHHHHHHHHHHHHHhchhhhhhc
Q 009026 448 EMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRVDQIIMA 527 (546)
Q Consensus 448 e~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~iD~ii~~ 527 (546)
+.||++|++|||+|+.+++.+|++.|..++.++|+|+.+|++.||++.|||||+.||+++|+.|+|+|++|||||++|..
T Consensus 396 e~ip~~La~NaG~d~~~~v~~l~~~h~~~~~~~G~d~~~g~~~d~~~~gI~dp~~vk~~al~~A~e~a~~iL~iD~iI~~ 475 (500)
T 3aq1_B 396 EVIPVALAENAGLDPIDIMVELRSQHEKGNKNAGLNVYTGEVVDMWENDVIEPLRIKTQAINAAMEATVMILRIDDVVAS 475 (500)
T ss_dssp THHHHHHHHHTTCCHHHHHHHHHHHHHTTCTTEEECTTTCCEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHCC------
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeeEeCCCCCccchHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999877778999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCC-----CCCCCCCCCCC
Q 009026 528 KPAGGPRR-----DQQPGGGMDED 546 (546)
Q Consensus 528 ~~~~~~~~-----~~~~~~~~~~~ 546 (546)
+|..+|++ ++ .++||.|
T Consensus 476 ~~~~~~~~~~g~~~~--~~~~~~~ 497 (500)
T 3aq1_B 476 KGSANQGMGPGGLPD--MPDLDMD 497 (500)
T ss_dssp ------------------------
T ss_pred CccCCCCCCCCCCCC--CCCCCcc
Confidence 88877754 23 4778865
No 23
>1we3_A CPN60(groel); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1wf4_a*
Probab=100.00 E-value=6.3e-94 Score=774.78 Aligned_cols=469 Identities=21% Similarity=0.304 Sum_probs=421.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccCh----HHHHHHHHHHHhhhhhCCCc
Q 009026 25 DEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHP----AAKLLVLAGKAQQEEIGDGA 100 (546)
Q Consensus 25 ~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~~~GDGt 100 (546)
.+++.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++|| .|+|++++|++|++++||||
T Consensus 9 ~~ar~~~~~~~~~la~~vkttLGPkG~~kmi~~~~g~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGT 88 (543)
T 1we3_A 9 EAARRALERGVNAVANAVKVTLGPRGRNVVLEKKFGSPTITKDGVTVAKEVELEDHLENIGAQLLKEVASKTNDVAGDGT 88 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHcccCChHHhHHHHHHHHHHHhhheecCCCc
Confidence 59999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhcccccCchhhH
Q 009026 101 NLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEIL 180 (546)
Q Consensus 101 tt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~l 180 (546)
||+++||++||+++.+++.+|+||..|++||++|++.+++.|++++.+ +.+++.|.++++++.+ +++|
T Consensus 89 TtvvVLA~~LL~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~------v~~~~~l~~vA~iS~~------~~~i 156 (543)
T 1we3_A 89 TTATVLAQAIVREGLKNVAAGANPLALKRGIEKAVEAAVEKIKALAIP------VEDRKAIEEVATISAN------DPEV 156 (543)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTCBC------CCSHHHHHHHHHHHHT------CHHH
T ss_pred chHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccc------CCCHHHHHHhhhhhcC------CHHH
Confidence 999999999999999999999999999999999999999999999875 3478999999877654 6789
Q ss_pred HHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccc-eeEeeEEEeccCC---------CCcccccCceEEEEEeeccc
Q 009026 181 CPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNS-TIVRGMVLKSDAV---------GSIKNMEKAKVAVFAGGVDT 250 (546)
Q Consensus 181 s~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS-~li~Giv~~~~~~---------~~~~~i~n~kI~ll~~~l~~ 250 (546)
++++++|+.++++++. |.|. .|+++++| ++++|++|++++. .|++.++||+|++++++
T Consensus 157 ~~li~dAv~~V~~~g~-------I~Ve--~G~~~~ds~~lv~G~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~--- 224 (543)
T 1we3_A 157 GKLIADAMEKVGKEGI-------ITVE--ESKSLETELKFVEGYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKK--- 224 (543)
T ss_dssp HHHHHHHHHTTCTTSE-------EEEE--ECSSSSCEEEEECSEEESCCBSSGGGCSBTTTTBCCEEEEEEEEESSC---
T ss_pred HHHHHHHHHHhCcCCc-------EEEe--cCCccccceEEEcCEEEecCccccccccCcccCceeecCceEEEECCC---
Confidence 9999999999976542 3333 79999999 9999999999862 36777999999999986
Q ss_pred ccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHH------CCeEEEE-----ecC
Q 009026 251 SATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCER------YKLMVLK-----ISS 319 (546)
Q Consensus 251 ~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~------~~I~vv~-----~v~ 319 (546)
+++++++. ++++++.+.|++|||++++|++.+++||.. .+|++|+ +++
T Consensus 225 ----------Is~~~~l~-----------~~le~i~~~g~~lvii~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~ 283 (543)
T 1we3_A 225 ----------VSNVRELL-----------PILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRR 283 (543)
T ss_dssp ----------BCCHHHHH-----------HHHHHHHTTTCCEEEEESCBCHHHHHHHHHHHHHTSCCEEEEECSSSHHHH
T ss_pred ----------cCCHHHHH-----------HHHHHHHhcCCCEEEEcCCccHHHHHHHHHhccccceeEEEEeccchhhhh
Confidence 45666654 688899999999999999999999999986 6789999 556
Q ss_pred HHHHHHHHHHhCCeeccc-----cCCCCCCCcccceeEEEEEECCeEEEEEEecCC------------------------
Q 009026 320 KFELRRFCRTTGAVAMLK-----LCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGG------------------------ 370 (546)
Q Consensus 320 ~~~l~~ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~------------------------ 370 (546)
+++|+|||++|||+++++ +++++++++|+|+.|++ +.+++++|++|.+
T Consensus 284 ~~~le~ia~~tGa~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ 360 (543)
T 1we3_A 284 KEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRI---TKDETTIVGGKGKKEDIEARINGIKKELETTDSEYAR 360 (543)
T ss_dssp HHHHHHHHHHHCCCCBCTTTTCCGGGCCGGGCEEEEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHTTCCSHHHH
T ss_pred HHHHHHHHHHhCCceeeccccCCcccCCHHHCCCceEEEE---EcCEEEEEcCCCCHHHHHHHHHHHHHHhhccCchhHH
Confidence 789999999999999996 89999999999999975 5689999999863
Q ss_pred ----------CCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCHHHHHHHHHHHHHhccccchHHHHH
Q 009026 371 ----------GNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAI 440 (546)
Q Consensus 371 ----------~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~ 440 (546)
.+++|||+|||+|+.+++|.||+++||++++|+++++| +|||||++|++++.+|++++.+.++++|+++
T Consensus 361 e~l~erlakl~~~~~tI~lrG~te~~l~E~~r~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~~~~g~~q~~i 439 (543)
T 1we3_A 361 EKLQERLAKLAGGVAVIRVGAATETELKEKKHRFEDALNATRAAVEEG-IVPGGGVTLLRAISAVEELIKKLEGDEATGA 439 (543)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhccC-cCCCccHHHHHHHHHHHHHhhccCchHHHHH
Confidence 13789999999999999999999999999999999999 9999999999999999999888889999999
Q ss_pred HHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEeccCCcccccccCccccchHHHHHHHHHHHHHHHHHhc
Q 009026 441 AKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLR 520 (546)
Q Consensus 441 ~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~ 520 (546)
++||+||+.||++|++|||+|+.+++.+|++.| ++.++|+|..+|++.||++.|||||+.||+++|+.|+|+|++||+
T Consensus 440 ~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~h--~~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~e~a~~iL~ 517 (543)
T 1we3_A 440 KIVRRALEEPARQIAENAGYEGSVIVQQILAET--KNPRYGFNAATGEFVDMVEAGIVDPAKVTRSALQNAASIGALILT 517 (543)
T ss_dssp HHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHCC--SCTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHhc--CCCCEEEeCCCCeecccccCCcCccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999877 356899999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCCCCCCCCCC-CCCC
Q 009026 521 VDQIIMAKPAGGPRRDQQPG-GGMD 544 (546)
Q Consensus 521 iD~ii~~~~~~~~~~~~~~~-~~~~ 544 (546)
||++|..+|...+++|..++ ++||
T Consensus 518 id~iI~~~~~~~~~~~~~~~~~~~~ 542 (543)
T 1we3_A 518 TEAVVAEKPEKKESTPASAGAGDMD 542 (543)
T ss_dssp EEEEEEECSCC--------------
T ss_pred HHHHhhcCCccCCCCCCCCCCCCCC
Confidence 99999999987776654333 5554
No 24
>1kp8_A Groel protein; chaperonin, assisted protein folding, chaperone; HET: ATP; 2.00A {Escherichia coli} SCOP: a.129.1.1 c.8.5.1 d.56.1.1 PDB: 1gr5_A 2c7e_A* 1grl_A 1oel_A 1xck_A 1gru_A 1mnf_A 1aon_A 2c7c_A 2c7d_A 2cgt_A 2nwc_A 3e76_A* 2eu1_A 1j4z_A 1kpo_O 1sx3_A* 3c9v_A 1ss8_A 3cau_A ...
Probab=100.00 E-value=6.3e-92 Score=757.99 Aligned_cols=455 Identities=19% Similarity=0.302 Sum_probs=417.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccCh----HHHHHHHHHHHhhhhhCCCc
Q 009026 25 DEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHP----AAKLLVLAGKAQQEEIGDGA 100 (546)
Q Consensus 25 ~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~~~GDGt 100 (546)
.+++.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+||+++|+++|| .|+|++++|++|++++||||
T Consensus 9 ~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~G~~~ITnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGT 88 (547)
T 1kp8_A 9 NDAGVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREIELEDKFENMGAQMVKEVASKANDAAGDGT 88 (547)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHHHHHHSSCH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEEcCHHHHHHHccccChhhhHHHHHHHHHHHhhccccCCCc
Confidence 59999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhcccccCchhhH
Q 009026 101 NLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEIL 180 (546)
Q Consensus 101 tt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~l 180 (546)
||+++|+++||+++.+++.+|+||..|++||++|++.+++.|++++.+ +.+++.|.++++++++ ++++|
T Consensus 89 TtvvVLA~~Ll~ea~~lv~~GihP~~I~~G~~~A~~~a~~~L~~~s~~------v~~~e~l~~vA~iS~~-----~~~~i 157 (547)
T 1kp8_A 89 TTATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTVAVEELKALSVP------CSDSKAIAQVGTISAN-----SDETV 157 (547)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHCBC------CCSHHHHHHHHHHHTT-----SCHHH
T ss_pred chhHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhCcC------CCCHHHHHHHHHHhcc-----chhHH
Confidence 999999999999999999999999999999999999999999999875 3478999999887654 47899
Q ss_pred HHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccc-eeEeeEEEeccCC---------CCcccccCceEEEEEeeccc
Q 009026 181 CPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNS-TIVRGMVLKSDAV---------GSIKNMEKAKVAVFAGGVDT 250 (546)
Q Consensus 181 s~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS-~li~Giv~~~~~~---------~~~~~i~n~kI~ll~~~l~~ 250 (546)
++++++|+.++++++. |+|. .|+++++| ++++|++|++++. .|++.++||+|++++++
T Consensus 158 ~~liadAv~~V~~dg~-------I~Ve--~G~~~~ds~~lveG~~fdkg~~~p~~vt~~~~m~~~lenp~Ill~d~~--- 225 (547)
T 1kp8_A 158 GKLIAEAMDKVGKEGV-------ITVE--DGTGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKK--- 225 (547)
T ss_dssp HHHHHHHHHHHCTTSE-------EEEE--CCSSSSCEEEEESCEEESCCBSSTTCCSBTTTTBEEEESCEEECEESE---
T ss_pred HHHHHHHHHHhCcCCc-------EEEE--eCCccccccEEEecEEEecCccccccccCcccCceEecCceEEEEcCc---
Confidence 9999999999976542 3333 79999999 9999999999862 36677999999999997
Q ss_pred ccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHH------CCeEEEE-----ecC
Q 009026 251 SATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCER------YKLMVLK-----ISS 319 (546)
Q Consensus 251 ~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~------~~I~vv~-----~v~ 319 (546)
+++++++. ++++++.+.|++|||++++|++.+++||.. .+|++|+ +++
T Consensus 226 ----------Is~~~~l~-----------~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~r 284 (547)
T 1kp8_A 226 ----------ISNIREML-----------PVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRR 284 (547)
T ss_dssp ----------ECCGGGTH-----------HHHHHHHGGGCCEEEEESEECHHHHHHHHHHGGGTSSCEEEEECSSCHHHH
T ss_pred ----------CCCHHHHH-----------HHHHHHHhcCCCEEEECCCcCHHHHHHHHhcccccceeEEEEecccccccc
Confidence 45566654 688899999999999999999999999987 5789999 666
Q ss_pred HHHHHHHHHHhCCeeccc-----cCCCCCCCcccceeEEEEEECCeEEEEEEecCCC-----------------------
Q 009026 320 KFELRRFCRTTGAVAMLK-----LCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGG----------------------- 371 (546)
Q Consensus 320 ~~~l~~ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~----------------------- 371 (546)
+++|+|||++|||+++++ +++++++++|+|+.|++ +.+++++|++|.+.
T Consensus 285 k~~le~ia~~tG~~ii~~~~g~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ 361 (547)
T 1kp8_A 285 KAMLQDIATLTGGTVISEEIGMELEKATLEDLGQAKRVVI---NKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDYDR 361 (547)
T ss_dssp HHHHHHHHHHHTCCCEEGGGTCCSTTCCTTTSEEEEEEEE---CSSCEEEEEECCCHHHHHHHHHHHHHHHHSCCSHHHH
T ss_pred HHHHHHHHHHhCCeEecccccCCcccCCHHHCCceeEEEE---ccceEEEEcCCCCHHHHHHHHHHHHHHhhcccchhhH
Confidence 789999999999999996 89999999999999976 56899999998631
Q ss_pred -----------CceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCHHHHHHHHHHHHHhccccchHHHHH
Q 009026 372 -----------NSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAI 440 (546)
Q Consensus 372 -----------~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~ 440 (546)
+++|||+|||+|+.+++|.||+++||++++|+++++| +|||||++|++++.+|++++. .++++|+++
T Consensus 362 ekl~erlakl~~~~~tI~vrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~i 439 (547)
T 1kp8_A 362 EKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEG-VVAGGGVALIRVASKLADLRG-QNADQNVGI 439 (547)
T ss_dssp HHHHHHHHHHHHCEEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHHHHTTTCCC-SSHHHHHHH
T ss_pred HHHHHHHHHhcCCeEEEEEcCCcHhHHHHHHHHHHHHHHHHHHhccCC-EEeCCcHHHHHHHHHHHHHhc-cCchHHHHH
Confidence 2689999999999999999999999999999999999 999999999999999999876 788999999
Q ss_pred HHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEeccCCcccccccCccccchHHHHHHHHHHHHHHHHHhc
Q 009026 441 AKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLR 520 (546)
Q Consensus 441 ~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~ 520 (546)
++||+||+.||++|++|||+|+.+++.+|++. +.++|+|..+|++.||++.|||||+.||+++|+.|+|+|++||+
T Consensus 440 ~~~a~ALe~ip~~la~NaG~d~~~vv~~l~~~----~~~~G~d~~~g~~~dm~~~gI~Dp~~vk~~al~~A~~~A~~iL~ 515 (547)
T 1kp8_A 440 KVALRAMEAPLRQIVLNCGEEPSVVANTVKGG----DGNYGYNAATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMIT 515 (547)
T ss_dssp HHHHHHTTHHHHHHHHHHTSCHHHHHHHHHHS----CTTEEEETTTTEEEETTTTTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhc----CCCEeEeCCCCccccchhcCceechHhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999864 46899999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCC
Q 009026 521 VDQIIMAKPAGG 532 (546)
Q Consensus 521 iD~ii~~~~~~~ 532 (546)
||++|..+|...
T Consensus 516 id~iI~~~~~~~ 527 (547)
T 1kp8_A 516 TECMVTDLPKND 527 (547)
T ss_dssp EEEEEEECCC--
T ss_pred HhheeecCCccC
Confidence 999999988744
No 25
>1iok_A Chaperonin 60; chaperone; 3.20A {Paracoccus denitrificans} SCOP: a.129.1.1 c.8.5.1 d.56.1.1
Probab=100.00 E-value=1.9e-92 Score=762.74 Aligned_cols=456 Identities=21% Similarity=0.297 Sum_probs=388.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccCh----HHHHHHHHHHHhhhhhCCCc
Q 009026 25 DEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHP----AAKLLVLAGKAQQEEIGDGA 100 (546)
Q Consensus 25 ~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP----~a~ll~~~~~~~~~~~GDGt 100 (546)
.+++.+|+.||..|+++|+|||||+||+|||+++.|+++|||||+|||++|+++|| .|+|++++|++|++++||||
T Consensus 10 ~~ar~~~i~~~~~la~~vkttLGPkG~~kmi~~~~g~~~iTnDG~tIlk~i~~~hp~en~~Akll~e~a~~qd~e~GDGT 89 (545)
T 1iok_A 10 SDARDRMLKGVNILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVSVAKEIELSDKFENMGAQMVREVASRTNDEAGDGT 89 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGCSTTCCEEEECCSSSSCEEECCHHHHHHHCCCSSHHHHHHHHHHHHHHHHGGGGCSTHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEECCCCCeEEeCCHHHHHHHhccCChhhHHHHHHHHHHHHhhccccCCCc
Confidence 59999999999999999999999999999999999999999999999999999999 99999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhcccccCchhhH
Q 009026 101 NLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEIL 180 (546)
Q Consensus 101 tt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~l 180 (546)
||+++|+++||+++.+++.+|+||..|++||+.|++.+++.|++++.+ +.+++.|.++++++++ ++++|
T Consensus 90 TtvvVLA~~Ll~ea~~li~~GihP~~I~~G~~~A~~~a~~~L~~~s~~------v~~~e~l~~va~iS~~-----~~~~i 158 (545)
T 1iok_A 90 TTATVLAQAIVREGLKAVAAGMNPMDLKRGIDVATAKVVEAIKSAARP------VNDSSEVAQVGTISAN-----GESFI 158 (545)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCBC------CCSTTTTTHHHHHTTT-----TCHHH
T ss_pred chHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccc------CCCHHHHHHHHHhhcC-----CchhH
Confidence 999999999999999999999999999999999999999999999875 2356788899877654 47899
Q ss_pred HHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccc-eeEeeEEEeccCC---------CCcccccCceEEEEEeeccc
Q 009026 181 CPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNS-TIVRGMVLKSDAV---------GSIKNMEKAKVAVFAGGVDT 250 (546)
Q Consensus 181 s~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS-~li~Giv~~~~~~---------~~~~~i~n~kI~ll~~~l~~ 250 (546)
++++++|+.++++++. +. |. .|+++++| ++++|++|++++. .|++.++||+|+++++++
T Consensus 159 ~~li~dAv~~V~~~g~--I~-----Ve--~G~~~~ds~~lveG~~~dkg~~~p~~vt~~~~m~~~~en~~Ill~d~~I-- 227 (545)
T 1iok_A 159 GQQIAEAMQRVGNEGV--IT-----VE--ENKGMETEVEVVEGMQFDRGYLSPYFVTNADKMIAELEDAYILLHEKKL-- 227 (545)
T ss_dssp HHHHHHHHHHHCTTSC--CC-----CE--ECSSSCCEEEEECCEECSCCCSCGGGCCCSSSSCEEEEEEEEEECSSCB--
T ss_pred HHHHHHHHHHhccCCe--EE-----EE--eCCccccceEEEecEEEecCccccccccCcccCceeecCCeEEEEcCCc--
Confidence 9999999999986542 33 33 79999999 9999999999863 367779999999999975
Q ss_pred ccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHH------CCeEEEE-----ecC
Q 009026 251 SATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCER------YKLMVLK-----ISS 319 (546)
Q Consensus 251 ~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~------~~I~vv~-----~v~ 319 (546)
++++++. ++++++.+.|++|||++++|++.+++||.. .+|++|+ +++
T Consensus 228 -----------~~~~~l~-----------~~le~i~~~g~~lvIi~~~I~~~Al~~L~~n~irg~~~v~aVk~~~~~~~~ 285 (545)
T 1iok_A 228 -----------SSLQPMV-----------PLLESVIQSQKPLLIVAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRR 285 (545)
T ss_dssp -----------CCCCC----------------------CCCCEEEESCBC-----------------CEEEECSCCTTHH
T ss_pred -----------CCHHHHH-----------HHHHHHHhcCCCEEEECCCcCHHHHHHHHHccccccceeEEEecchhhhcc
Confidence 3444443 678889999999999999999999999987 4678888 667
Q ss_pred HHHHHHHHHHhCCeeccc-----cCCCCCCCcccceeEEEEEECCeEEEEEEecCC------------------------
Q 009026 320 KFELRRFCRTTGAVAMLK-----LCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGG------------------------ 370 (546)
Q Consensus 320 ~~~l~~ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~------------------------ 370 (546)
+++|+|||++|||+++++ +++++++++|+|+.|++ +.+++++|++|++
T Consensus 286 ~~~le~ia~~tGa~ii~~~~~~~l~~~~~~~LG~a~~v~~---~~~~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~ 362 (545)
T 1iok_A 286 KAMLQDIAILTGGQVISEDLGMKLENVTIDMLGRAKKVSI---NKDNTTIVDGAGEKAEIEARVSQIRQQIEETTSDYDR 362 (545)
T ss_dssp HHHHHHHHHHHTC---------------CTTSEEEEEEEE---CSSCEEEESCCCCHHHHHHHHHHHHHHHTTCCCSSHH
T ss_pred HHHHHHHHHhcCCeeecccccCCcccCCHHHcCcCcEEEE---ecCEEEEEeCCCCHHHHHHHHHHHHHHHhccCchhhH
Confidence 889999999999999996 99999999999999976 5689999999863
Q ss_pred ----------CCceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCHHHHHHHHHHHHHhccccchHHHHH
Q 009026 371 ----------GNSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAI 440 (546)
Q Consensus 371 ----------~~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~ 440 (546)
.+++|||+|||+|+.+++|.||+++||++++|+++++| +|||||++|++++.+|++++. .++++|+++
T Consensus 363 ekl~erlakl~~~~~tI~lrG~te~~l~E~kr~i~DAl~~~r~av~~g-iVpGGGa~e~~~s~~L~~~~~-~~g~~q~~i 440 (545)
T 1iok_A 363 EKLQERVAKLAGGVAVIRVGGMTEIEVKERKDRVDDALNATRAAVQEG-IVVGGGVALVQGAKVLEGLSG-ANSDQDAGI 440 (545)
T ss_dssp HHHHHHHHTTSSCEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHHHGGGGGSCCC-SSHHHHHHH
T ss_pred HHHHHHHHhccCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHhhcC-CCCCchHHHHHHHHHHHHHhc-cCchHHHHH
Confidence 13789999999999999999999999999999999999 999999999999999999877 788999999
Q ss_pred HHHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEeccCCcccccccCccccchHHHHHHHHHHHHHHHHHhc
Q 009026 441 AKFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLR 520 (546)
Q Consensus 441 ~~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~ 520 (546)
++||+||+.||++|++|||+|+.+++.+|++.| +.++|+|..+|++.||++.|||||+.||+++|+.|+|+|++||+
T Consensus 441 ~~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~~---~~~~G~d~~~g~~~dm~~~gI~dp~~vk~~al~~A~~~A~~iL~ 517 (545)
T 1iok_A 441 AIIRRALEAPMRQIAENAGVDGAVVAGKVRESS---DKAFGFNAQTEEYGDMFKFGVIDPAKVVRTALEDAASVAGLLIT 517 (545)
T ss_dssp HHHHHHTTHHHHHHHHHHTSCHHHHHHHHHSCC---STTEEEETTTTEEEEHHHHTCEEEHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhhc---CCCeeEeCCCCcccchHhcCcEEccHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999765 46899999999999999999999999999999999999999999
Q ss_pred hhhhhhcCCCCC
Q 009026 521 VDQIIMAKPAGG 532 (546)
Q Consensus 521 iD~ii~~~~~~~ 532 (546)
||++|...|...
T Consensus 518 id~iI~~~~~~~ 529 (545)
T 1iok_A 518 TEAMIAEKPEPK 529 (545)
T ss_dssp EEEEEEECC---
T ss_pred HHHhhccCCccC
Confidence 999999988643
No 26
>3rtk_A 60 kDa chaperonin 2; heat shock protein, chaperone; 2.80A {Mycobacterium tuberculosis} PDB: 1sjp_A
Probab=100.00 E-value=3.6e-92 Score=757.71 Aligned_cols=457 Identities=21% Similarity=0.269 Sum_probs=346.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCCccceeEcCCCCEEEecCHHHHHHhccccChH----HHHHHHHHHHhhhhhCCCc
Q 009026 25 DEAVLKNIDACKQLSTITRTSLGPNGMNKMVINHLDKLFVTNDAATIVNELEVQHPA----AKLLVLAGKAQQEEIGDGA 100 (546)
Q Consensus 25 ~~~~~~~i~~~~~l~~~v~sslGP~G~~kmi~~~~g~~~iTnDg~tIl~~l~~~hP~----a~ll~~~~~~~~~~~GDGt 100 (546)
++++.+|+.||+.|+++|+|||||+||+|||+++.|+++|||||+|||++|+++||+ |+|++++|++|++++||||
T Consensus 9 ~~ar~~~~~~~~~la~~vkttLGPkG~~kml~~~~G~~~ITnDG~TIlk~i~v~hp~~n~gAkll~e~a~~qd~e~GDGT 88 (546)
T 3rtk_A 9 EEARRGLERGLNALADAVKVTLGPKGRNVVLEKKWGAPTITNDGVSIAKEIELEDPYEKIGAELVKEVAKKTDDVAGDGT 88 (546)
T ss_dssp ----------------------------------------------------CCCHHHHHHHHHHHHHHTSCC-------
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCCeEEEECCCCCeEEECcHHHHHHHccCCChhhhHHHHHHHHHHHhhhhhhCCCc
Confidence 599999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHhhhhccCCCCCCCCHHHHHHHHHhhhcccccCchhhH
Q 009026 101 NLTISFAGEILQGAEELIRMGLHPSEIISGYTKAINKTIEVLEELVEEGSENMDVRNTEEVIYRMKAAVASKQFGQEEIL 180 (546)
Q Consensus 101 tt~vlL~~~Ll~~~~~li~~gi~p~~I~~g~~~a~~~~~~~L~~~~~~~~~~~~~~~~~~l~~i~~t~l~sk~~~~~~~l 180 (546)
||+++||++||+++.+++.+|+||..|++||++|.+.++++|++++.+ +.+++.|.++++++.+ ++++
T Consensus 89 TtvvVLAgeLL~ea~~li~~GihP~~I~~G~~~A~~~a~e~L~~~s~~------v~~~e~L~~vA~iS~~------~~~i 156 (546)
T 3rtk_A 89 TTATVLAQALVREGLRNVAAGANPLGLKRGIEKAVEKVTETLLKGAKE------VETKEQIAATAAISAG------DQSI 156 (546)
T ss_dssp CHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHTCBC------CCSHHHHHHHHHHHHT------CHHH
T ss_pred chHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHhccc------CCChHHHHhHeEEeCC------chHH
Confidence 999999999999999999999999999999999999999999999875 3478899999987665 5689
Q ss_pred HHHHHHHHHHhcCCCCCcccccchhhhhcCCCCcccceeEeeEEEeccCC---------CCcccccCceEEEEEeecccc
Q 009026 181 CPLIADACIQVCPKNPANFNVDNVRVAKLLGGGLHNSTIVRGMVLKSDAV---------GSIKNMEKAKVAVFAGGVDTS 251 (546)
Q Consensus 181 s~lv~~a~~~v~~~~~~~~~~~~I~i~k~~Gg~~~dS~li~Giv~~~~~~---------~~~~~i~n~kI~ll~~~l~~~ 251 (546)
++++++|+.++++++. |+|.+. ++...+|++++|++|++++. .|++.++||+|++++++
T Consensus 157 ~~liadAv~~V~~dgv-------I~Ve~~-~~~~~ds~lveGm~fdkg~~sp~~vt~~e~m~~~len~kIll~d~k---- 224 (546)
T 3rtk_A 157 GDLIAEAMDKVGNEGV-------ITVEES-NTFGLQLELTEGMRFDKGYISGYFVTDPERQEAVLEDPYILLVSSK---- 224 (546)
T ss_dssp HHHHHHHHHHSCTTSE-------EEEECC-SSSSCEEEEECEEEESCCBSSGGGCSBTTTTBEEEESCEEEEBSSE----
T ss_pred HHHHHHHHHHhccCCc-------eEEEec-CCcccceEEeeeEEEcCCccCcccccCcccCeeEecccEEEEECCc----
Confidence 9999999999976542 444442 24557999999999998862 47888999999999986
Q ss_pred cccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCCcccHHHHHHHHHC------CeEEEEecC-----H
Q 009026 252 ATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGAAVGEMALHFCERY------KLMVLKISS-----K 320 (546)
Q Consensus 252 ~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~------~I~vv~~v~-----~ 320 (546)
+++++++. ++++++.+.|++|||++++|++.+++||..+ +|++|+.++ +
T Consensus 225 ---------Is~~~~l~-----------~~le~I~~~g~~lvIi~~~I~~~Al~~L~~n~lrg~~~v~aVk~~~~~~~rk 284 (546)
T 3rtk_A 225 ---------VSTVKDLL-----------PLLEKVIGAGKPLLIIAEDVEGEALSTLVVNKIRGTFKSVAVKAPGFGDRRK 284 (546)
T ss_dssp ---------ECCSTTTH-----------HHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHHSSCCEEEEECSSCHHHHH
T ss_pred ---------cCCHHHHH-----------HHHHHHHhcCCCEEEEcCCCCHHHHHHHHHhCCCCceEEEEeccccccccch
Confidence 45666654 5789999999999999999999999999854 468887665 6
Q ss_pred HHHHHHHHHhCCeecc-----ccCCCCCCCcccceeEEEEEECCeEEEEEEecCCC------------------------
Q 009026 321 FELRRFCRTTGAVAML-----KLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGGG------------------------ 371 (546)
Q Consensus 321 ~~l~~ia~~tGa~ii~-----~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~~------------------------ 371 (546)
++|+|||++|||++++ +++++++++||+|+.|+ ++.+++++|++|.+.
T Consensus 285 ~~le~ia~~tG~~ii~~~~~~~l~~~~~~~LG~a~~v~---i~~d~~~~i~g~~~~~~i~~r~~~i~~~~~~~~s~~~~e 361 (546)
T 3rtk_A 285 AMLQDMAILTGGQVISEEVGLTLENADLSLLGKARKVV---VTKDETTIVEGAGDTDAIAGRVAQIRQEIENSDSDYDRE 361 (546)
T ss_dssp HHHHHHHHHHTCCCBCSSSSCCSTTCCTTTSEEEEEEE---ECSSCEEEEEECSCHHHHHHHHHHHHHHHHTCSCHHHHH
T ss_pred hhHHHHHHHhCCEEeeccccCccccCCHhhCCeeEEEE---EcCCeEEEEcCCCCHHHHHHHHHHHHHHHhhccchhhHH
Confidence 7899999999999999 58999999999999997 588899999998631
Q ss_pred ----------CceEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCHHHHHHHHHHHHHhccccchHHHHHH
Q 009026 372 ----------NSVSTVVLRGSTDSILDDLERAVDDGVNTYKAMCRDSRIVPGAAATEIELARRLKEFSFKETGLDQYAIA 441 (546)
Q Consensus 372 ----------~~~~TIll~G~~~~~l~e~~r~~~dal~~l~~~~~~~~vvpGGG~~E~~la~~L~~~~~~~~~~~~~~~~ 441 (546)
+.+|||+|||+|+.+++|.||+++||++++|+++++| +|||||++|++++.+|++++ .++++|++++
T Consensus 362 kl~erlakl~g~~atI~vrG~te~~l~E~er~l~DAl~a~r~av~~g-iVpGGGa~e~~~s~~L~~~~--~~g~eq~~i~ 438 (546)
T 3rtk_A 362 KLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEG-IVAGGGVTLLQAAPTLDELK--LEGDEATGAN 438 (546)
T ss_dssp HHHHHHHHHHHCEEEEECCCCSSTHHHHHHHHHHHHHHHHHHHHHHC-EEETTTHHHHTTGGGSTTSC--CCTTHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEeCCCCHHHHHHHHHHHHHHHHHHHHHHhCC-cccCCcHHHHHHHHHHHHhc--cccHHHHHHH
Confidence 2489999999999999999999999999999999999 99999999999999999887 7899999999
Q ss_pred HHHHHhhHhHHHHHHhcCCCHHHHHHHHHHHHhcCCCceeEeccCCcccccccCccccchHHHHHHHHHHHHHHHHHhch
Q 009026 442 KFAESFEMVPKTLAENAGLNAMEIISSLYAEHASGKTKVGIDLENGVCADISTMNVWDLYVTKFFALKYAADAACTVLRV 521 (546)
Q Consensus 442 ~~a~aLe~ip~~L~~NaG~~~~~~l~~l~~~~~~~~~~~Gid~~~g~i~d~~~~gi~dp~~vk~~~l~~A~e~a~~lL~i 521 (546)
+||+|||.||++|++|||+|+.+++.+|++. ...+|+|..+|++.||++.|||||+.||+++|+.|+|+|++||+|
T Consensus 439 ~~a~ALe~ip~~La~NaG~d~~~vv~~l~~~----~~~~G~d~~~g~~~Dm~~~gI~dp~~vk~~al~~A~e~A~~iL~i 514 (546)
T 3rtk_A 439 IVKVALEAPLKQIAFNSGLEPGVVAEKVRNL----PAGHGLNAQTGVYEDLLAAGVADPVKVTRSALQNAASIAGLFLTT 514 (546)
T ss_dssp HHHHHTTHHHHHHHTTTTCCHHHHHHHHHHS----CTTEECCSSSCCCEETTTTTCEEEHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHHHHHHHhh----cCCEeEcCCCCcEeeHHHcCCEecHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999874 234899999999999999999999999999999999999999999
Q ss_pred hhhhhcCCCCCCCC
Q 009026 522 DQIIMAKPAGGPRR 535 (546)
Q Consensus 522 D~ii~~~~~~~~~~ 535 (546)
|++|..+|..+|.+
T Consensus 515 d~iI~~~~~~~~~~ 528 (546)
T 3rtk_A 515 EAVVADKPEKEKAS 528 (546)
T ss_dssp C-------------
T ss_pred HHHHhcCCCCCCCC
Confidence 99999998877644
No 27
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=100.00 E-value=4.7e-37 Score=285.09 Aligned_cols=171 Identities=17% Similarity=0.366 Sum_probs=147.5
Q ss_pred cccceeEeeEEEeccCC--CCcccccCceEEEEEeecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 009026 214 LHNSTIVRGMVLKSDAV--GSIKNMEKAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAE 291 (546)
Q Consensus 214 ~~dS~li~Giv~~~~~~--~~~~~i~n~kI~ll~~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~ 291 (546)
++||++++|++|++.+. +||++++||||++++|+|++++++.++++.++++++++.+.++|++++++++++|++.|+|
T Consensus 1 ~~dS~lv~Gvvl~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~n 80 (178)
T 1gml_A 1 MEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIHQLCEDIIQLKPD 80 (178)
T ss_dssp --CCSEEEEEEESCCCSSTTSCCEEESCCEEEESSCBSCC--------------CHHHHHHHHHHHHHHHHHHHHTTCCS
T ss_pred CCCcEEEEEEEEeccccCCCCCcccccceEEEEecccCCccccCccEEEECCHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Confidence 36999999999999984 5899999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHhCCeeccccCCCCCCCccc-ceeEEEEEECCeEEEEEEecCC
Q 009026 292 VIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAMLKLCQPNPDDLGY-VDSVSVEEIGGARVTIVRNEGG 370 (546)
Q Consensus 292 vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~tGa~ii~~l~~l~~~~lG~-~~~v~~~~ig~~~~~~~~~~~~ 370 (546)
|||++++|+|++++||+++||++++++++++|+|||++|||++++++++++++.+|+ |+.|++.++|+++|++|++|+
T Consensus 81 VVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~~v~~~~ig~~~~~~~~gc~- 159 (178)
T 1gml_A 81 VVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCK- 159 (178)
T ss_dssp EEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCCEESCGGGCCGGGSBCCEEEEEEEEETTEEEEEEEEES-
T ss_pred EEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCeEeCChhhCChhhhCCcccEEEEEEECCeEEEEEECCC-
Confidence 999999999999999999999999999999999999999999999999999999999 999999999999999999998
Q ss_pred CCceEEEEEeCCCHH
Q 009026 371 GNSVSTVVLRGSTDS 385 (546)
Q Consensus 371 ~~~~~TIll~G~~~~ 385 (546)
.+++|||+|||++..
T Consensus 160 ~~~~~TIllRG~~~~ 174 (178)
T 1gml_A 160 DPKACTILLRGASHH 174 (178)
T ss_dssp STTSCEEEEEC----
T ss_pred CCCEEEEEEECCCcc
Confidence 489999999999864
No 28
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=99.98 E-value=2.3e-32 Score=248.41 Aligned_cols=151 Identities=21% Similarity=0.408 Sum_probs=146.5
Q ss_pred EeeEEEeccCCC--CcccccCceEEEEEeecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEeCC
Q 009026 220 VRGMVLKSDAVG--SIKNMEKAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEVIVSGA 297 (546)
Q Consensus 220 i~Giv~~~~~~~--~~~~i~n~kI~ll~~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~vVi~~~ 297 (546)
++|++|++.+.+ ||++++||||++++|+|++++++.++++.++++++++.+.++|++++++++++|++.|+|||||++
T Consensus 1 i~Gvv~~k~~~~~~mpk~i~nakI~ll~~~Le~~k~e~~~~v~i~~~~~~~~~~~~E~~~l~~~v~kI~~~g~nVVl~~k 80 (159)
T 1ass_A 1 MSGIVIDKEKVHSKMPDVVKNAKIALIDSALEIKKTEIEAKVQISDPSKIQDFLNQETNTFKQMVEKIKKSGANVVLCQK 80 (159)
T ss_dssp CCCEEESCCCSCTTSCSEEEEEEEEEESSCBSCCHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHHHHHTTCSEEEESS
T ss_pred CceEEEecccCCCCCCcCcCCccEEEEecCcCCcccccceeEEECCHHHHHHHHHHHHHHHHHHhhhhhhCCCeEEEECC
Confidence 579999999864 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHCCeEEEEecCHHHHHHHHHHhCCeeccccCCCCCCCcccceeEEEEEECCeEEEEEEecCC
Q 009026 298 AVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAVAMLKLCQPNPDDLGYVDSVSVEEIGGARVTIVRNEGG 370 (546)
Q Consensus 298 ~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~tGa~ii~~l~~l~~~~lG~~~~v~~~~ig~~~~~~~~~~~~ 370 (546)
+|++++++||+++||++++++++++|+|||++|||++++++++++++.+|+|+.|++.++|+++|++|++|++
T Consensus 81 ~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~iv~~~~~l~~~~LG~~~~v~e~~ig~~~~~~~~g~~~ 153 (159)
T 1ass_A 81 GIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAKIVTDLDDLTPSVLGEAETVEERKIGDDRMTFVMGCKN 153 (159)
T ss_dssp CBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCCCBSSTTSCCTTSCEEEEEEEEEEETTEEEEEEESCC-
T ss_pred ccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCeeeCccccCCcccCccceEEEEEEECCeEEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999974
No 29
>3m6c_A 60 kDa chaperonin 1; chaperone, ATP-binding, nucleotide-binding; 2.20A {Mycobacterium tuberculosis}
Probab=98.92 E-value=2.5e-08 Score=90.57 Aligned_cols=141 Identities=19% Similarity=0.219 Sum_probs=108.6
Q ss_pred ceeEeeEEEeccCC---------CCcccccCceEEEEEeecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHh
Q 009026 217 STIVRGMVLKSDAV---------GSIKNMEKAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAE 287 (546)
Q Consensus 217 S~li~Giv~~~~~~---------~~~~~i~n~kI~ll~~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~ 287 (546)
.++++|+-|++++. .|...++||.|++.+.. +++.+++. ++++++.+
T Consensus 2 levvEGmqfDrGYiSpyfvtd~~~m~~~le~p~ILitdkK-------------Is~i~~il-----------P~LE~~~~ 57 (194)
T 3m6c_A 2 LEFTEGIGFDKGFLSAYFVTDFDNQQAVLEDALILLHQDK-------------ISSLPDLL-----------PLLEKVAG 57 (194)
T ss_dssp CCCCSSEEESCCBSCGGGCSBTTTTBEEEEEEEEEEBSSE-------------ECCHHHHH-----------HHHHHHHH
T ss_pred eEEEeeeEccCcccCceeeeccCCcEEEEecceEEEEcCc-------------cCCHHHHH-----------HHHHHHHH
Confidence 35789999999862 35556889999988876 68888887 68888889
Q ss_pred cCCcEEEeCCcccHHHHHHH--HH----CCeEEEEecC-----HHHHHHHHHHhCCeecc-----ccCCCCCCCccccee
Q 009026 288 SGAEVIVSGAAVGEMALHFC--ER----YKLMVLKISS-----KFELRRFCRTTGAVAML-----KLCQPNPDDLGYVDS 351 (546)
Q Consensus 288 ~~v~vVi~~~~i~~~~~~~l--~~----~~I~vv~~v~-----~~~l~~ia~~tGa~ii~-----~l~~l~~~~lG~~~~ 351 (546)
.+.+++|...+|+..++..| |+ .++++|+.+. +..|++||.+|||++++ .+++.+.++||+|++
T Consensus 58 ~~kpLlIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~ 137 (194)
T 3m6c_A 58 TGKPLLIVAEDVEGEALATLVVNAIRKTLKAVAVKGPYFGDRRKAFLEDLAVVTGGQVVNPDAGMVLREVGLEVLGSARR 137 (194)
T ss_dssp HTCCEEEEESEECHHHHHHHHHHHHHTSSCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEE
T ss_pred hCCCeEEEecccccchhhhhhhhhccceEEEEEEECCCCchhhhhhhHhHHHhcCCeEEeccCCcccccCCHHHCCCccE
Confidence 99999999999999888765 33 6799999997 46799999999999997 356777889999999
Q ss_pred EEEEEECCeEEEEEEecCCCCceEEEEEeC-CCHHHHHHHHHHHHHHH
Q 009026 352 VSVEEIGGARVTIVRNEGGGNSVSTVVLRG-STDSILDDLERAVDDGV 398 (546)
Q Consensus 352 v~~~~ig~~~~~~~~~~~~~~~~~TIll~G-~~~~~l~e~~r~~~dal 398 (546)
+.+ . +--|.++.| +++..++++-..++..+
T Consensus 138 v~v-----------t------kd~T~iv~G~g~~~~I~~Rv~qIr~~i 168 (194)
T 3m6c_A 138 VVV-----------S------KDDTVIVDGGGTAEAVANRAKHLRAEI 168 (194)
T ss_dssp EEE-----------C------SSCEEEEEECCCHHHHHHHHHHHHHHH
T ss_pred EEE-----------c------CCceEEecCCCCHHHHHHHHHHHHHHH
Confidence 843 1 223555544 56666666666555544
No 30
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=98.85 E-value=9.8e-08 Score=86.90 Aligned_cols=138 Identities=17% Similarity=0.264 Sum_probs=106.0
Q ss_pred eeEEEeccCC---------CCcccccCceEEEEEeecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Q 009026 221 RGMVLKSDAV---------GSIKNMEKAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAE 291 (546)
Q Consensus 221 ~Giv~~~~~~---------~~~~~i~n~kI~ll~~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~ 291 (546)
+|+-|++++. .|...++||.|++.+.. |++.+++. ++++++.+.+.+
T Consensus 13 ~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkK-------------Is~i~~il-----------P~LE~v~~~~rp 68 (201)
T 3osx_A 13 EGMQFDRGYLSPYFINKPESGSVELENPYILLVDKK-------------ISNIRELL-----------PVLEGVAKASKP 68 (201)
T ss_dssp CCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEE-------------ECCHHHHH-----------HHHHHHHTSSCC
T ss_pred cccEecCccCChheeecccCCEEEecCCeEEEEcCc-------------cCCHHHHH-----------HHHHHHHHhCCC
Confidence 4888888762 35567889999999976 68888887 688889999999
Q ss_pred EEEeCCcccHHHHHHH--HH----CCeEEEEecC-----HHHHHHHHHHhCCeeccc-----cCCCCCCCcccceeEEEE
Q 009026 292 VIVSGAAVGEMALHFC--ER----YKLMVLKISS-----KFELRRFCRTTGAVAMLK-----LCQPNPDDLGYVDSVSVE 355 (546)
Q Consensus 292 vVi~~~~i~~~~~~~l--~~----~~I~vv~~v~-----~~~l~~ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~~ 355 (546)
++|...+|+..++..| |+ .++++|+.+. +..|++||.+|||++++. +++.+.++||+|++|.+
T Consensus 69 LlIIAEDvegEALatLvvNklrg~l~v~AVKAPgFGdrRk~~L~DIAilTGg~visee~g~~Le~~~~~~LG~a~~V~v- 147 (201)
T 3osx_A 69 LVIIAEDVEGEALATLVVNNMRGIVKVASVKAPGFGDRRKAMLQDIATLTNGTVISEEIGLELEKATLEDLGQAKRVVI- 147 (201)
T ss_dssp EEEEEEEECHHHHHHHHHHHHHTSCCEEEEECSSCHHHHHHHHHHHHHHHTCCCBCGGGTCCGGGCCGGGCEEEEEEEE-
T ss_pred eEEEeccccchhhhHHHHhhccceEEEEEEeCCCCccchhhhhHhHHHHhCCEEEecccCCccccCCHhhCCCccEEEE-
Confidence 9999999999888765 33 6799999997 456999999999999974 56677889999999843
Q ss_pred EECCeEEEEEEecCCCCceEEEEEeC-CCHHHHHHHHHHHHHHHH
Q 009026 356 EIGGARVTIVRNEGGGNSVSTVVLRG-STDSILDDLERAVDDGVN 399 (546)
Q Consensus 356 ~ig~~~~~~~~~~~~~~~~~TIll~G-~~~~~l~e~~r~~~dal~ 399 (546)
. +--|+++.| +++..++++-..++.-+.
T Consensus 148 ----------t------kd~TtIv~G~G~~~~I~~Rv~qIr~qie 176 (201)
T 3osx_A 148 ----------N------KDTTTIIDGVGEEGAIAARVTQIRQQIE 176 (201)
T ss_dssp ----------C------SSCEEEEEECCCHHHHHHHHHHHHHHHH
T ss_pred ----------c------CCceEEecCCCCHHHHHHHHHHHHHHHH
Confidence 1 123555644 566666666665555443
No 31
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=98.80 E-value=3.6e-08 Score=85.43 Aligned_cols=109 Identities=18% Similarity=0.248 Sum_probs=89.4
Q ss_pred eEEEeccC---------CCCcccccCceEEEEEeecccccccccceEEecCHHHHHHHHHHHHHHHHHHHHHHHhcCCcE
Q 009026 222 GMVLKSDA---------VGSIKNMEKAKVAVFAGGVDTSATETKGTVLIHNAEQLENYAKTEEAKVEGLIKAVAESGAEV 292 (546)
Q Consensus 222 Giv~~~~~---------~~~~~~i~n~kI~ll~~~l~~~~~~~~~~v~i~~~~~l~~~~~~E~~~l~~~v~~l~~~~v~v 292 (546)
|+-|++++ ..|...++||.|++.+.. +++.+++. ++++++.+.+.++
T Consensus 1 GmqfDrGYlSpYfvtd~e~m~~~le~p~ILitdkK-------------Is~i~~ll-----------P~LE~v~~~~~pL 56 (145)
T 1srv_A 1 GYQFDKGYISPYFVTNPETMEAVLEDAFILIVEKK-------------VSNVRELL-----------PILEQVAQTGKPL 56 (145)
T ss_dssp CEEESCCBSCGGGCSBTTTTBEEEEEEEEEEESSE-------------ECCHHHHH-----------HHHHHHHTTTCCE
T ss_pred CccccCCccCceeecCccccEEEeeccEEEEeccc-------------ccCHHHHH-----------HHHHHHHHHCCCE
Confidence 67777775 235566789999998876 78888887 6888889999999
Q ss_pred EEeCCcccHHHHHHHH--H----CCeEEEEecC-----HHHHHHHHHHhCCeeccc-----cCCCCCCCcccceeEEE
Q 009026 293 IVSGAAVGEMALHFCE--R----YKLMVLKISS-----KFELRRFCRTTGAVAMLK-----LCQPNPDDLGYVDSVSV 354 (546)
Q Consensus 293 Vi~~~~i~~~~~~~l~--~----~~I~vv~~v~-----~~~l~~ia~~tGa~ii~~-----l~~l~~~~lG~~~~v~~ 354 (546)
+|.+.+|+..++..|. + .++++|+.+. +..|++||.+||+++++. +++.+.+++|+|+++.+
T Consensus 57 lIIAedvegeaLatLvvNklrg~l~v~AVKAPgfGd~Rk~~L~DiAilTGg~visee~g~~Le~~~~~~LG~a~~v~v 134 (145)
T 1srv_A 57 LIIAEDVEGEALATLVVNKLRGTLSVAAVKAPGFGDRRKEMLKDIAAVTGGTVISEELGFKLENATLSMLGRAERVRI 134 (145)
T ss_dssp EEEESEECHHHHHHHHHHHHTTSCCEEEEECCSSHHHHHHHHHHHHHHHTCCEECTTTTCCGGGCCGGGCEEEEEEEE
T ss_pred EEEecccchhhhhhhhhhhhcccceEEEEeCCCcchhhHHHHHHHHHHhCCEEEccccCCccccCCHhHCCccCEEEE
Confidence 9999999999988663 3 6799999996 567999999999999974 45667788999999954
No 32
>1o13_A Probable NIFB protein; ribonuclease H-like motif fold, structural genomics, joint C structural genomics, JCSG, protein structure initiative; 1.83A {Thermotoga maritima} SCOP: c.55.5.1 PDB: 1t3v_A
Probab=62.49 E-value=14 Score=31.34 Aligned_cols=53 Identities=21% Similarity=0.193 Sum_probs=40.3
Q ss_pred HHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHhCCe
Q 009026 280 GLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAV 333 (546)
Q Consensus 280 ~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~tGa~ 333 (546)
...+.|.+.++++|||. ++.+-+...|.+.||-++......--+.|.....++
T Consensus 67 ~~a~~L~~~gv~vVI~g-~IG~~a~~~L~~~GI~v~~~~~g~i~eal~~~~~G~ 119 (136)
T 1o13_A 67 AVPNFVKEKGAELVIVR-GIGRRAIAAFEAMGVKVIKGASGTVEEVVNQYLSGQ 119 (136)
T ss_dssp CHHHHHHHTTCSEEECS-CCCHHHHHHHHHTTCEEECSCCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHCCCCEEEEC-CCCHHHHHHHHHCCCEEEecCCCCHHHHHHHHHhCC
Confidence 35566677899999998 589999999999999999876544445555555554
No 33
>1eo1_A Hypothetical protein MTH1175; mixed A/B protein, mixed beta sheet, strand order 321456; NMR {Methanothermobacterthermautotrophicus} SCOP: c.55.5.1
Probab=62.41 E-value=19 Score=29.78 Aligned_cols=52 Identities=10% Similarity=0.161 Sum_probs=39.4
Q ss_pred HHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHhCCe
Q 009026 281 LIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAV 333 (546)
Q Consensus 281 ~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~tGa~ 333 (546)
..+.|...|+++|||.+ +.+-+...|.+.||-++......--+.|.....+.
T Consensus 57 ~~~~l~~~gv~~vi~~~-iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 108 (124)
T 1eo1_A 57 TAQIIANNGVKAVIASS-PGPNAFEVLNELGIKIYRATGTSVEENLKLFTEGN 108 (124)
T ss_dssp HHHHHHHTTCCEEEECC-SSHHHHHHHHHHTCEEEECCSCCHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEECC-cCHHHHHHHHHCCCEEEEcCCCCHHHHHHHHHhCC
Confidence 45556788999999995 89999999999999999975543344555555554
No 34
>2yx6_A Hypothetical protein PH0822; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=61.91 E-value=16 Score=30.17 Aligned_cols=53 Identities=13% Similarity=0.174 Sum_probs=40.4
Q ss_pred HHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHhCCe
Q 009026 280 GLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAV 333 (546)
Q Consensus 280 ~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~tGa~ 333 (546)
...+.|.+.++++|||. ++.+-+...|.+.||-++......--+.|.....+.
T Consensus 54 ~~~~~L~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~~~v~eal~~~~~g~ 106 (121)
T 2yx6_A 54 DLPNFIKDHGAKIVLTY-GIGRRAIEYFNSLGISVVTGVYGRISDVIKAFIGGK 106 (121)
T ss_dssp HHHHHHHHTTCCEEECS-BCCHHHHHHHHHTTCEEECSBCSBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHcCC
Confidence 45666778899999998 589999999999999999875543344555555554
No 35
>2wfb_A Putative uncharacterized protein ORP; mixed molybdenum-copper sulphide cluster, alpha and beta protein, biosynthetic protein; 2.00A {Desulfovibrio gigas}
Probab=58.51 E-value=16 Score=30.02 Aligned_cols=52 Identities=21% Similarity=0.172 Sum_probs=39.1
Q ss_pred HHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCH-HHHHHHHHHhCC
Q 009026 280 GLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSK-FELRRFCRTTGA 332 (546)
Q Consensus 280 ~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~-~~l~~ia~~tGa 332 (546)
...+.|.+.++++|||. ++.+-+...|.+.||-++..... .--+.|.....+
T Consensus 58 ~~~~~l~~~gv~~vi~~-~iG~~a~~~L~~~GI~v~~~~~g~~i~eal~~~~~g 110 (120)
T 2wfb_A 58 NAAQVLAKSGAGVLLTG-YVGPKAFQALQAAGIKVGQDLEGLTVRQAVQRFLDG 110 (120)
T ss_dssp HHHHHHHHHTEEEEECS-CCCHHHHHHHHHTTCEEECCCTTSBHHHHHHHHHTT
T ss_pred HHHHHHHHCCCCEEEEC-CCCHhHHHHHHHCCCEEEEcCCCCcHHHHHHHHHcC
Confidence 35566677899999998 58999999999999999987654 334445554444
No 36
>1rdu_A Conserved hypothetical protein; atnos, candid, structural genomics, joint center for structu genomics, JCSG, protein structure initiative; NMR {Thermotoga maritima} SCOP: c.55.5.1
Probab=51.86 E-value=23 Score=28.86 Aligned_cols=52 Identities=12% Similarity=0.181 Sum_probs=39.2
Q ss_pred HHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHhCCe
Q 009026 281 LIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAV 333 (546)
Q Consensus 281 ~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~tGa~ 333 (546)
..+.|...++++|||.+ +.+-+...|.+.||-++......--+.|.....+.
T Consensus 54 ~~~~l~~~gv~~vi~~~-iG~~a~~~L~~~GI~v~~~~~~~i~eal~~~~~g~ 105 (116)
T 1rdu_A 54 VVQSLVSKGVEYLIASN-VGRNAFETLKAAGVKVYRFEGGTVQEAIDAFSEGR 105 (116)
T ss_dssp HHHHHHTTTCCEEECSS-CCSSCHHHHHTTTCEEECCCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHcCCCEEEECC-CCHhHHHHHHHCCCEEEECCCCCHHHHHHHHHhCC
Confidence 44556788999999985 89999999999999999875544445555555554
No 37
>2re2_A Uncharacterized protein TA1041; dinitrogenase iron-molybdenum cofactor, structural genomics, center for structural genomics; HET: MSE; 1.30A {Thermoplasma acidophilum dsm 1728}
Probab=47.96 E-value=32 Score=29.08 Aligned_cols=52 Identities=15% Similarity=0.201 Sum_probs=38.4
Q ss_pred HHHHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHhCCe
Q 009026 280 GLIKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGAV 333 (546)
Q Consensus 280 ~~v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~tGa~ 333 (546)
...+.|.+.++++|||. ++.+-+...|.+ ||-++......--+.|.....+.
T Consensus 70 ~~~~~L~~~gv~~VI~g-~iG~~a~~~L~~-GI~v~~~~~~~veeal~~~~~G~ 121 (136)
T 2re2_A 70 FMLKSALDHGANALVLS-EIGSPGFNFIKN-KMDVYIVPEMPVADALKLILEGK 121 (136)
T ss_dssp HHHHHHHHTTCSEEEES-CCBHHHHHHHTT-TSEEEECCSCBHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEEC-CCCHhHHHHHHC-CCEEEEcCCCCHHHHHHHHHhCC
Confidence 35566677899999998 579999999999 99999986533334445445443
No 38
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=40.15 E-value=47 Score=25.33 Aligned_cols=48 Identities=17% Similarity=0.241 Sum_probs=35.4
Q ss_pred HHHHHHHhcCCcEEEeCCcccHHHH----HHHHHCCeEEEEecCHHHHHHHH
Q 009026 280 GLIKAVAESGAEVIVSGAAVGEMAL----HFCERYKLMVLKISSKFELRRFC 327 (546)
Q Consensus 280 ~~v~~l~~~~v~vVi~~~~i~~~~~----~~l~~~~I~vv~~v~~~~l~~ia 327 (546)
+.++.|.+-.+.+||.+.+.++... .++.+++|.++...++.+|-+.+
T Consensus 18 ~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~sk~eLG~a~ 69 (82)
T 3v7e_A 18 QTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVESMKKLGKAC 69 (82)
T ss_dssp HHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHHHHHHH
T ss_pred HHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCHHHHHHHh
Confidence 4555566667899999999998544 45678999999988877665443
No 39
>2qtd_A Uncharacterized protein MJ0327; ribonuclease H-like motif fold, iron-molybdenum cofactor, ST genomics; HET: MSE PG4; 1.70A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 2kla_A
Probab=35.38 E-value=71 Score=25.29 Aligned_cols=48 Identities=6% Similarity=0.082 Sum_probs=35.8
Q ss_pred HHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecCHHHHHHHHHHhCC
Q 009026 283 KAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISSKFELRRFCRTTGA 332 (546)
Q Consensus 283 ~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~~~~l~~ia~~tGa 332 (546)
+.|.+.++++|||. ++.+-+...|.+. |-++......--+.|.....+
T Consensus 50 ~~l~~~gv~~vi~~-~iG~~a~~~L~~~-I~v~~~~~~~v~eal~~~~~g 97 (105)
T 2qtd_A 50 KSIVKENVNAIICK-NISEENYKKFSKK-IEIYHAEGDDVDKNISLFIEG 97 (105)
T ss_dssp HHHHHTCCSEEEES-CCCHHHHHHHHTT-CEEEECCSSCHHHHHHHHHTT
T ss_pred HHHHHCCCCEEEEC-CCCHHHHHHHHhc-cEEEECCCCCHHHHHHHHHcC
Confidence 45567899999997 5899999999999 999986554334445544444
No 40
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=34.85 E-value=91 Score=25.66 Aligned_cols=48 Identities=19% Similarity=0.217 Sum_probs=36.7
Q ss_pred HHHHHHHhcCCcEEEeCCcccHH-----HHHHHHHCCeEEEEecCHHHHHHHH
Q 009026 280 GLIKAVAESGAEVIVSGAAVGEM-----ALHFCERYKLMVLKISSKFELRRFC 327 (546)
Q Consensus 280 ~~v~~l~~~~v~vVi~~~~i~~~-----~~~~l~~~~I~vv~~v~~~~l~~ia 327 (546)
+.++.|.+-.+.+||.+.++++. ...+|.+++|.++...++.+|-+.+
T Consensus 27 ~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~sk~eLG~a~ 79 (121)
T 2lbw_A 27 EVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIPSKQDLGAAG 79 (121)
T ss_dssp HHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECCCHHHHHHHH
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEECCHHHHHHHh
Confidence 45666777788999999999883 3356788999999888877766543
No 41
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=34.60 E-value=85 Score=26.15 Aligned_cols=49 Identities=6% Similarity=0.284 Sum_probs=36.1
Q ss_pred HHHHHHHhcCCcEEEeCCcccH-----HHHHHHHHCCeEEEEecCHHHHHHHHH
Q 009026 280 GLIKAVAESGAEVIVSGAAVGE-----MALHFCERYKLMVLKISSKFELRRFCR 328 (546)
Q Consensus 280 ~~v~~l~~~~v~vVi~~~~i~~-----~~~~~l~~~~I~vv~~v~~~~l~~ia~ 328 (546)
+.++.|.+-.+.+||.+.+.+| ....+|.+++|.++...++.+|-+.+-
T Consensus 31 ~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v~sk~~LG~a~G 84 (126)
T 2xzm_U 31 EVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSVPKRASLGEYLG 84 (126)
T ss_dssp HHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEESCSHHHHHHHT
T ss_pred HHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEECCHHHHHHHHC
Confidence 4555566778899999999975 345678899999998776666655544
No 42
>3on1_A BH2414 protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, unknown function; HET: MSE; 1.65A {Bacillus halodurans}
Probab=31.20 E-value=90 Score=24.65 Aligned_cols=48 Identities=19% Similarity=0.314 Sum_probs=35.3
Q ss_pred HHHHHHHhcCCcEEEeCCcccHHHH----HHHHHCCeEEEEecCHHHHHHHH
Q 009026 280 GLIKAVAESGAEVIVSGAAVGEMAL----HFCERYKLMVLKISSKFELRRFC 327 (546)
Q Consensus 280 ~~v~~l~~~~v~vVi~~~~i~~~~~----~~l~~~~I~vv~~v~~~~l~~ia 327 (546)
+..+.|.+-.+.+||.+.+.++... +++.+++|.++...++.+|-..+
T Consensus 25 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~~s~~eLG~a~ 76 (101)
T 3on1_A 25 QVVKAVQNGQVTLVILSSDAGIHTKKKLLDKCGSYQIPVKVVGNRQMLGRAI 76 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHHTCCEEEESCHHHHHHHT
T ss_pred HHHHHHHcCCCcEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCHHHHHHHh
Confidence 4556667777899999999988444 45678899999887776665443
No 43
>3psh_A Protein HI_1472; substrate binding protein, periplasmic binding protein, MOLY binding protein, metal transport; 1.50A {Haemophilus influenzae} PDB: 3psa_A
Probab=30.60 E-value=72 Score=30.81 Aligned_cols=52 Identities=12% Similarity=0.072 Sum_probs=38.1
Q ss_pred HHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecC--------------------------HHHHHHHHHHhCCe
Q 009026 282 IKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISS--------------------------KFELRRFCRTTGAV 333 (546)
Q Consensus 282 v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~--------------------------~~~l~~ia~~tGa~ 333 (546)
+++|...+++|||.....++...+.|.+.||.++-.-. .+.++.++.++|-.
T Consensus 77 ~E~i~~l~PDlIi~~~~~~~~~~~~L~~~Gipvv~~~~~~~~~~~~~~~~pt~~~~~~~~~~~~~~~i~~lg~~lg~e 154 (326)
T 3psh_A 77 IESLLALKPDVVFVTNYAPSEMIKQISDVNIPVVAISLRTGEVGEKGKLNPTLTDEDKAYNDGLKQGIELIAEVFEKK 154 (326)
T ss_dssp HHHHHHTCCSEEEEETTCCHHHHHHHHTTTCCEEEECSCCSCGGGTTCSSCCCTTHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEeCCCChHHHHHHHHcCCCEEEEeccccccccccccccccccccchhhhhHHHHHHHHHHHcCCH
Confidence 35567889999998766566677788898887775421 25678888888865
No 44
>3md9_A Hemin-binding periplasmic protein HMUT; transport protein, alpha beta protein, rigid helical backbon substrate-free, heme transport; 1.50A {Yersinia pestis} PDB: 3nu1_A*
Probab=30.54 E-value=1e+02 Score=28.32 Aligned_cols=52 Identities=4% Similarity=0.110 Sum_probs=38.1
Q ss_pred HHHHHhcCCcEEEeCCccc-HHHHHHHHHCCeEEEEec---C----HHHHHHHHHHhCCe
Q 009026 282 IKAVAESGAEVIVSGAAVG-EMALHFCERYKLMVLKIS---S----KFELRRFCRTTGAV 333 (546)
Q Consensus 282 v~~l~~~~v~vVi~~~~i~-~~~~~~l~~~~I~vv~~v---~----~~~l~~ia~~tGa~ 333 (546)
+++|...++||||...... +...+.|.+.||.++..- + .+.++.++.++|-.
T Consensus 52 ~E~i~~l~PDlIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (255)
T 3md9_A 52 AEGILAMKPTMLLVSELAQPSLVLTQIASSGVNVVTVPGQTTPESVAMKINAVATALHQT 111 (255)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHccCCCEEEEcCCcCchhHHHHHHHcCCcEEEeCCCCCHHHHHHHHHHHHHHhCCH
Confidence 4566889999999876654 456677899987776542 2 34578899999864
No 45
>2q8p_A Iron-regulated surface determinant E; helical backbone metal receptor superfamily, metal transport; HET: HEM; 1.95A {Staphylococcus aureus subsp} PDB: 2q8q_A*
Probab=30.48 E-value=52 Score=30.54 Aligned_cols=51 Identities=10% Similarity=0.095 Sum_probs=35.0
Q ss_pred HHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEE--ecC----HHHHHHHHHHhCCe
Q 009026 283 KAVAESGAEVIVSGAAVGEMALHFCERYKLMVLK--ISS----KFELRRFCRTTGAV 333 (546)
Q Consensus 283 ~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~--~v~----~~~l~~ia~~tGa~ 333 (546)
++|...++||||.....++...+.|.+.||.++- .-+ .+.++.++.++|-.
T Consensus 54 E~i~~l~PDLIi~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~~g~~ 110 (260)
T 2q8p_A 54 EAVKKLKPTHVLSVSTIKDEMQPFYKQLNMKGYFYDFDSLKGMQKSITQLGDQFNRK 110 (260)
T ss_dssp HHHHHTCCSEEEEEGGGHHHHHHHHHHHTSCCEEECCSSHHHHHHHHHHHHHHTTCH
T ss_pred HHHHhcCCCEEEecCccCHHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHHHHhCCh
Confidence 4567889999998766555666778888865443 222 24577888888864
No 46
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=30.31 E-value=1.2e+02 Score=23.96 Aligned_cols=47 Identities=21% Similarity=0.284 Sum_probs=35.1
Q ss_pred HHHHHHHhcCCcEEEeCCcccHHHH----HHHHHCCeEEEEecCHHHHHHH
Q 009026 280 GLIKAVAESGAEVIVSGAAVGEMAL----HFCERYKLMVLKISSKFELRRF 326 (546)
Q Consensus 280 ~~v~~l~~~~v~vVi~~~~i~~~~~----~~l~~~~I~vv~~v~~~~l~~i 326 (546)
+..+.|.+-.+.+||.+.+.++... +++...+|.++...++.+|-..
T Consensus 26 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~~s~~eLG~A 76 (101)
T 3v7q_A 26 LVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKVESRAVLGRS 76 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEESCHHHHHHH
T ss_pred hhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeeechHHHHHhh
Confidence 4556667778899999999988443 4567899999988777665444
No 47
>2r7a_A Bacterial heme binding protein; periplasmic binding protein, heme transport, transport protein; HET: HEM; 2.05A {Shigella dysenteriae} PDB: 2rg7_A
Probab=28.62 E-value=1.2e+02 Score=28.00 Aligned_cols=52 Identities=10% Similarity=0.155 Sum_probs=36.7
Q ss_pred HHHHHhcCCcEEEeCCc-ccHHHHHHHHHCCeEEEEec----CH----HHHHHHHHHhCCe
Q 009026 282 IKAVAESGAEVIVSGAA-VGEMALHFCERYKLMVLKIS----SK----FELRRFCRTTGAV 333 (546)
Q Consensus 282 v~~l~~~~v~vVi~~~~-i~~~~~~~l~~~~I~vv~~v----~~----~~l~~ia~~tGa~ 333 (546)
+++|...++||||.... .++...+.|.+.||.++-.. +. +.++.++.++|-.
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~~i~~lg~~~g~~ 112 (256)
T 2r7a_A 52 SEGILSLRPDSVITWQDAGPQIVLDQLRAQKVNVVTLPRVPATLEQMYANIRQLAKTLQVP 112 (256)
T ss_dssp HHHHHTTCCSEEEEETTCSCHHHHHHHHHTTCEEEEECCCSCCHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHccCCCEEEEcCCCCCHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHHHHHhCCH
Confidence 45567889999998654 45667778899998665431 22 3578888888864
No 48
>2r79_A Periplasmic binding protein; heme transport, transport prote; HET: HEM; 2.40A {Pseudomonas aeruginosa}
Probab=27.85 E-value=1.1e+02 Score=28.75 Aligned_cols=52 Identities=13% Similarity=0.150 Sum_probs=37.5
Q ss_pred HHHHHhcCCcEEEeCCcc-cHHHHHHHHHCCeEEEEec---C----HHHHHHHHHHhCCe
Q 009026 282 IKAVAESGAEVIVSGAAV-GEMALHFCERYKLMVLKIS---S----KFELRRFCRTTGAV 333 (546)
Q Consensus 282 v~~l~~~~v~vVi~~~~i-~~~~~~~l~~~~I~vv~~v---~----~~~l~~ia~~tGa~ 333 (546)
+++|...+++|||..... ++...+.|.+.||.++-.. + .+.++.++.++|-.
T Consensus 52 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~~i~~lg~~~g~~ 111 (283)
T 2r79_A 52 AEGVLALRPDILIGTEEMGPPPVLKQLEGAGVRVETLSAKPDLEALESNLKKLGDWLGVP 111 (283)
T ss_dssp HHHHHTTCCSEEEECTTCCCHHHHHHHHHTTCCEEECCCCSSHHHHHHHHHHHHHHHTCH
T ss_pred HHHHHhcCCCEEEEeCccCcHHHHHHHHHcCCcEEEecCCCCHHHHHHHHHHHHHHhCCH
Confidence 355788999999987643 4567778899998766432 2 35678888888864
No 49
>1n2z_A Vitamin B12 transport protein BTUF; HET: CNC PG4; 2.00A {Escherichia coli} SCOP: c.92.2.2 PDB: 2qi9_F* 4dbl_E 1n4a_A* 1n4d_A
Probab=26.91 E-value=83 Score=28.85 Aligned_cols=52 Identities=10% Similarity=0.135 Sum_probs=34.6
Q ss_pred HHHHHhcCCcEEEeCC-cccHHHHHHHHHCCeEEEEec--C----HHHHHHHHHHhCCe
Q 009026 282 IKAVAESGAEVIVSGA-AVGEMALHFCERYKLMVLKIS--S----KFELRRFCRTTGAV 333 (546)
Q Consensus 282 v~~l~~~~v~vVi~~~-~i~~~~~~~l~~~~I~vv~~v--~----~~~l~~ia~~tGa~ 333 (546)
+++|...++||||... ..++...+.|.+.||.++-.- + .+.++.+++++|-.
T Consensus 50 ~E~i~~l~PDLIi~~~~~~~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~~ 108 (245)
T 1n2z_A 50 LERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQP 108 (245)
T ss_dssp HHHHHHTCCSEEEECTTTSCHHHHHHHHHHTCCEEECCCCSHHHHHHHHHHHGGGCSCH
T ss_pred HHHHhccCCCEEEEeCCCCcHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHHHhCCH
Confidence 3456788999999853 456667778888887766432 1 23466677777653
No 50
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=26.65 E-value=80 Score=26.64 Aligned_cols=48 Identities=19% Similarity=0.245 Sum_probs=34.8
Q ss_pred HHHHHHHHhcCCcEEEeCCcccHH-----HHHHHHHCCeEEEEecCHHHHHHH
Q 009026 279 EGLIKAVAESGAEVIVSGAAVGEM-----ALHFCERYKLMVLKISSKFELRRF 326 (546)
Q Consensus 279 ~~~v~~l~~~~v~vVi~~~~i~~~-----~~~~l~~~~I~vv~~v~~~~l~~i 326 (546)
++.++.|.+-.+.+||.+.++++. ...+|.+.||.++...++.+|-+.
T Consensus 38 ~~v~kai~~gkakLViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG~a 90 (134)
T 2ale_A 38 NEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRA 90 (134)
T ss_dssp HHHHHHHHHTCEEEEEEETTCSSGGGGTHHHHHHHHHTCCEEEESCHHHHHHH
T ss_pred hHHHHHHHhCCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCEEEECCHHHHHHH
Confidence 455666677778899999888884 446678889998887666655443
No 51
>2wi8_A Iron-uptake system-binding protein; bacillibactin and enterobactin binding, triscatecholate BIND protein, iron transport; 1.55A {Bacillus subtilis} PDB: 2why_A 2xuz_A* 2xv1_A* 2phz_A
Probab=26.20 E-value=1.1e+02 Score=29.24 Aligned_cols=51 Identities=16% Similarity=0.123 Sum_probs=36.6
Q ss_pred HHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecC----HHHHHHHHHHhCCe
Q 009026 283 KAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISS----KFELRRFCRTTGAV 333 (546)
Q Consensus 283 ~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~----~~~l~~ia~~tGa~ 333 (546)
++|..+++||||.....++...+.|.+.+..++-... .+.++.+++++|-.
T Consensus 90 E~I~~l~PDLIi~~~~~~~~~~~~L~~~gp~v~~~~~~~~~~~~i~~lg~~lg~e 144 (311)
T 2wi8_A 90 EKILEMKPDVILASTKFPEKTLQKISTAGTTIPVSHISSNWKENMMLLAQLTGKE 144 (311)
T ss_dssp HHHHHHCCSEEEEETTSCHHHHHHHHTTSCEEEECCCGGGHHHHHHHHHHHHTCH
T ss_pred HHHHhCCCCEEEEcCccCHHHHHHHHhhCCEEEeeCCCcCHHHHHHHHHHHhCCH
Confidence 4557789999998766677777888888765554322 34578888888864
No 52
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=25.71 E-value=1.7e+02 Score=23.17 Aligned_cols=50 Identities=16% Similarity=0.278 Sum_probs=36.1
Q ss_pred HHHHHHHHHhcCCcEEEeCCcccHHHH----HHHHHCCeEEEE-ecCHHHHHHHH
Q 009026 278 VEGLIKAVAESGAEVIVSGAAVGEMAL----HFCERYKLMVLK-ISSKFELRRFC 327 (546)
Q Consensus 278 l~~~v~~l~~~~v~vVi~~~~i~~~~~----~~l~~~~I~vv~-~v~~~~l~~ia 327 (546)
.++..+.|.+-.+.+||.+.+.++... .|+.+++|.++. ..++.+|-..+
T Consensus 27 ~~~v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eLG~a~ 81 (104)
T 4a18_G 27 YKSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVGSNVELGTAC 81 (104)
T ss_dssp HHHHHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHHHHHT
T ss_pred HHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHh
Confidence 345666777778999999999998443 456678999996 66666654433
No 53
>2etv_A Iron(III) ABC transporter, periplasmic iron-bindi protein, putative; periplasmic iron-binding protein, structural genomics; HET: MLY; 1.70A {Thermotoga maritima} SCOP: c.92.2.4
Probab=23.95 E-value=93 Score=30.45 Aligned_cols=52 Identities=12% Similarity=0.029 Sum_probs=31.9
Q ss_pred HHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecC-----------HHHHHHHHHHhCCe
Q 009026 282 IKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISS-----------KFELRRFCRTTGAV 333 (546)
Q Consensus 282 v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~-----------~~~l~~ia~~tGa~ 333 (546)
+++|..+++||||....-.+...+.+.+.||.++---. .+.++.++.++|-.
T Consensus 89 ~E~Ilal~PDLIi~~~~~~~~~~~~~~~~GiPvv~~~~~~~~~~~~~~~~~~i~~lG~~lG~e 151 (346)
T 2etv_A 89 LESLITLQPDVVFITYVDRXTAXDIQEXTGIPVVVLSYGNLGTFEDEDLFRSIELAGXILGRE 151 (346)
T ss_dssp HHHHHHHCCSEEEEESCCHHHHHHHHHHHTSCEEEECCCCTTCSCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHhcCCCCEEEEeCCccchHHHHHHhcCCcEEEEecCccCcccHHHHHHHHHHHHHHcCCH
Confidence 34556778999987654334555667776665554310 34567777777753
No 54
>3tny_A YFIY (ABC transport system substrate-binding PROT; schizokinen, nutrient binding protein, ABC transporter, metal transport; HET: SKZ; 1.55A {Bacillus cereus}
Probab=22.91 E-value=82 Score=30.00 Aligned_cols=51 Identities=10% Similarity=0.111 Sum_probs=36.8
Q ss_pred HHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEecC----HHHHHHHHHHhCCe
Q 009026 283 KAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKISS----KFELRRFCRTTGAV 333 (546)
Q Consensus 283 ~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v~----~~~l~~ia~~tGa~ 333 (546)
++|..+++||||.....++...+.+.+.++.++..-. .+.++.++.++|-.
T Consensus 90 E~I~~l~PDLIi~~~~~~~~~~~~l~~i~p~v~~~~~~~~~~~~i~~lg~~~g~e 144 (303)
T 3tny_A 90 ETIASLKPDLIIGNKMRHEKVYEQLKAIAPTVFSETLRGEWKDNFKFYAKALNKE 144 (303)
T ss_dssp HHHHHTCCSEEEEEHHHHGGGHHHHHTTSCEEEECCCTTCHHHHHHHHHHHTTCH
T ss_pred HHHHcCCCCEEEEeccchHHHHHHhhcCCcEEEeccCcccHHHHHHHHHHHhCch
Confidence 4567889999998766666666677777777765443 35678888888854
No 55
>4hn9_A Iron complex transport system substrate-binding P; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.85A {Eubacterium eligens}
Probab=22.79 E-value=1.3e+02 Score=29.10 Aligned_cols=51 Identities=8% Similarity=0.038 Sum_probs=35.6
Q ss_pred HHHHHhcCCcEEEeCCcccHHHHHHHHHCCeEEEEec--C----HHHHHHHHHHhCCe
Q 009026 282 IKAVAESGAEVIVSGAAVGEMALHFCERYKLMVLKIS--S----KFELRRFCRTTGAV 333 (546)
Q Consensus 282 v~~l~~~~v~vVi~~~~i~~~~~~~l~~~~I~vv~~v--~----~~~l~~ia~~tGa~ 333 (546)
+++|..++++|||.... +....+.|.+.||.++-.- + .+.++.+++++|-.
T Consensus 109 ~E~i~al~PDLIi~~~~-~~~~~~~L~~~gipvv~~~~~~~~~~~~~i~~lg~~lg~e 165 (335)
T 4hn9_A 109 TEACVAATPDVVFLPMK-LKKTADTLESLGIKAVVVNPEDQSLLEECITLVGKITNNA 165 (335)
T ss_dssp HHHHHHTCCSEEEEEGG-GHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHHHHHTTCH
T ss_pred HHHHHhcCCCEEEEeCc-chhHHHHHHHcCCCEEEEcCCCHHHHHHHHHHHHHHcCCH
Confidence 46678889999998765 4555667888887766542 2 24577788888764
No 56
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=22.52 E-value=2.1e+02 Score=22.88 Aligned_cols=50 Identities=16% Similarity=0.228 Sum_probs=35.5
Q ss_pred HHHHHHHHHhcCCcEEEeCCcccHHHH----HHHHHCCeEEEEe-cCHHHHHHHH
Q 009026 278 VEGLIKAVAESGAEVIVSGAAVGEMAL----HFCERYKLMVLKI-SSKFELRRFC 327 (546)
Q Consensus 278 l~~~v~~l~~~~v~vVi~~~~i~~~~~----~~l~~~~I~vv~~-v~~~~l~~ia 327 (546)
.++..+.|.+-.+.+||.+.+.++... .++.+++|.++.. .++.+|-..+
T Consensus 26 ~~~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~sk~eLG~a~ 80 (110)
T 3cpq_A 26 SKRTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKITSLELGAVC 80 (110)
T ss_dssp HHHHHHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCSCHHHHHHHT
T ss_pred HHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcCCHHHHHHHh
Confidence 345666667777899999988887544 4567789998877 6666665443
No 57
>1xbi_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich fold, RNA binding protein/structural protein complex; HET: EPE; 1.45A {Methanocaldococcus jannaschii} SCOP: d.79.3.1 PDB: 1ra4_A* 1sds_A 3paf_A
Probab=21.56 E-value=1.4e+02 Score=24.51 Aligned_cols=49 Identities=20% Similarity=0.224 Sum_probs=35.3
Q ss_pred HHHHHHHhcCCcEEEeCCcccHH-----HHHHHHHCCeEEEEecCHHHHHHHHH
Q 009026 280 GLIKAVAESGAEVIVSGAAVGEM-----ALHFCERYKLMVLKISSKFELRRFCR 328 (546)
Q Consensus 280 ~~v~~l~~~~v~vVi~~~~i~~~-----~~~~l~~~~I~vv~~v~~~~l~~ia~ 328 (546)
+..+.|.+-.+.+||.+.++++. ...+|.+++|.++...++.+|-+.+-
T Consensus 36 ~v~kai~~gka~lViiA~D~~p~~~~~~l~~lc~~~~VP~~~v~sk~eLG~a~G 89 (120)
T 1xbi_A 36 EVTKAVERGIAKLVIIAEDVKPEEVVAHLPYLCEEKGIPYAYVASKQDLGKAAG 89 (120)
T ss_dssp HHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHHHTCCEEEESCHHHHHHHTT
T ss_pred HHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHhcCCCEEEeCCHHHHHHHhC
Confidence 45556666778899998888773 34567788999888877776655443
No 58
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=21.16 E-value=1.7e+02 Score=23.77 Aligned_cols=50 Identities=14% Similarity=0.239 Sum_probs=37.3
Q ss_pred HHHHHHHHHhcCCcEEEeCCcccHH----HHHHHHHCCeEEEEe-cCHHHHHHHH
Q 009026 278 VEGLIKAVAESGAEVIVSGAAVGEM----ALHFCERYKLMVLKI-SSKFELRRFC 327 (546)
Q Consensus 278 l~~~v~~l~~~~v~vVi~~~~i~~~----~~~~l~~~~I~vv~~-v~~~~l~~ia 327 (546)
.++.++.|.+-.+.+||.+.+.++. ...++..++|.++.. .++.+|-+.+
T Consensus 31 ~~~t~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~~~s~~eLG~A~ 85 (112)
T 3iz5_f 31 YKTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHFHGNNVDLGTAC 85 (112)
T ss_dssp HHHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECCCCTTCTHHHHH
T ss_pred HHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEeCCCHHHHHHHh
Confidence 3456667777789999999999984 345677899999987 6667765544
No 59
>2aif_A Ribosomal protein L7A; high-mobility like protein, transcription factor, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum} SCOP: d.79.3.1
Probab=21.04 E-value=1.4e+02 Score=24.99 Aligned_cols=50 Identities=24% Similarity=0.310 Sum_probs=35.5
Q ss_pred HHHHHHHHHhcCCcEEEeCCcccHHH-----HHHHHHCCeEEEEecCHHHHHHHH
Q 009026 278 VEGLIKAVAESGAEVIVSGAAVGEMA-----LHFCERYKLMVLKISSKFELRRFC 327 (546)
Q Consensus 278 l~~~v~~l~~~~v~vVi~~~~i~~~~-----~~~l~~~~I~vv~~v~~~~l~~ia 327 (546)
.++..+.|.+-.+.+||.+.+.++.- ..+|.+++|.++...++.+|-+.+
T Consensus 46 ~~~v~kal~~gkaklViiA~D~~~~~~~~~l~~lc~~~~IP~~~v~sk~eLG~a~ 100 (135)
T 2aif_A 46 ANEATKALNRGIAEIVLLAADAEPLEILLHLPLVCEDKNTPYVFVRSKVALGRAC 100 (135)
T ss_dssp HHHHHHHHHTTCEEEEEEETTCSCHHHHHHHHHHHHHTTCCEEEESCHHHHHHHT
T ss_pred HHHHHHHHHcCCCeEEEEecCCChHHHHhHHHHHHHhcCCcEEEECCHHHHHHHh
Confidence 34556666666788999998888852 246778999999887776655443
No 60
>3u5e_c L32, RP73, YL38, 60S ribosomal protein L30; translation, ribosome, ribosomal R ribosomal protein, STM1, eukaryotic ribosome; 3.00A {Saccharomyces cerevisiae} PDB: 3izc_f 3izs_f 3o58_Z 3o5h_Z 1t0k_B 3u5i_c 4b6a_c 1ck2_A 1cn7_A 1nmu_B* 3jyw_2
Probab=20.68 E-value=2e+02 Score=22.87 Aligned_cols=51 Identities=16% Similarity=0.170 Sum_probs=36.7
Q ss_pred HHHHHHHHhcCCcEEEeCCcccHHH----HHHHHHCCeEEEE-ecCHHHHHHHHHHhCC
Q 009026 279 EGLIKAVAESGAEVIVSGAAVGEMA----LHFCERYKLMVLK-ISSKFELRRFCRTTGA 332 (546)
Q Consensus 279 ~~~v~~l~~~~v~vVi~~~~i~~~~----~~~l~~~~I~vv~-~v~~~~l~~ia~~tGa 332 (546)
++.++.|.+-.+.+||...+.++.. .+++..++|.++. ..++.+| ..++|-
T Consensus 28 ~~v~kai~~gkaklVilA~D~~~~~~~~i~~~c~~~~ip~~~~~~s~~eL---G~A~Gk 83 (105)
T 3u5e_c 28 KSTVKSLRQGKSKLIIIAANTPVLRKSELEYYAMLSKTKVYYFQGGNNEL---GTAVGK 83 (105)
T ss_dssp HHHHHHHHTTCCSEEEECTTSCHHHHHHHHHHHHHHTCEEEECSSCHHHH---HHHTTC
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEeCCCHHHH---HHHhCC
Confidence 4566667777889999999998844 4566788999995 5566665 444554
No 61
>1vq8_F 50S ribosomal protein L7AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.79.3.1 PDB: 1vq4_F* 1vq5_F* 1vq6_F* 1vq7_F* 1s72_F* 1vq9_F* 1vqk_F* 1vql_F* 1vqm_F* 1vqn_F* 1vqo_F* 1vqp_F* 1yhq_F* 1yi2_F* 1yij_F* 1yit_F* 1yj9_F* 1yjn_F* 1yjw_F* 2otj_F* ...
Probab=20.61 E-value=1.7e+02 Score=23.87 Aligned_cols=50 Identities=10% Similarity=0.133 Sum_probs=36.2
Q ss_pred HHHHHHHHhcCCcEEEeCCcccHH-----HHHHHHHCCeEEEEecCHHHHHHHHH
Q 009026 279 EGLIKAVAESGAEVIVSGAAVGEM-----ALHFCERYKLMVLKISSKFELRRFCR 328 (546)
Q Consensus 279 ~~~v~~l~~~~v~vVi~~~~i~~~-----~~~~l~~~~I~vv~~v~~~~l~~ia~ 328 (546)
++..+.|.+-.+.+||.+.+.++. ...+|.+++|.++...++.+|-+.+-
T Consensus 35 ~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~~~sk~eLG~a~G 89 (120)
T 1vq8_F 35 NETTKSIERGSAELVFVAEDVQPEEIVMHIPELADEKGVPFIFVEQQDDLGHAAG 89 (120)
T ss_dssp HHHHHHHHHTCCSEEEEESCCSSGGGTTTHHHHHHTTCCCEEEESCHHHHHHHTT
T ss_pred HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHhcCCCEEEECCHHHHHHHhC
Confidence 455666677778899998888763 34567789999888877776655443
No 62
>2fc3_A 50S ribosomal protein L7AE; alpha-beta-alpha sandwich, ribosome, RNA binding protein; 1.56A {Aeropyrum pernix} SCOP: d.79.3.1 PDB: 3pla_C* 3id5_C* 3hax_D* 2hvy_D* 3hay_D* 3nvi_B 3nmu_C 3nvk_E* 3lwr_C 3lwo_C* 3lwq_C* 3lwp_C 3lwv_C 3hjw_C* 2czw_A 1pxw_A
Probab=20.36 E-value=1.7e+02 Score=24.04 Aligned_cols=50 Identities=22% Similarity=0.224 Sum_probs=35.6
Q ss_pred HHHHHHHHHhcCCcEEEeCCcccHH-----HHHHHHHCCeEEEEecCHHHHHHHH
Q 009026 278 VEGLIKAVAESGAEVIVSGAAVGEM-----ALHFCERYKLMVLKISSKFELRRFC 327 (546)
Q Consensus 278 l~~~v~~l~~~~v~vVi~~~~i~~~-----~~~~l~~~~I~vv~~v~~~~l~~ia 327 (546)
.++..+.|.+-.+.+||.+.+.++. ...+|.+++|.++...++.+|-+.+
T Consensus 33 ~~~v~kal~~gka~lViiA~D~~~~~~~~~l~~lc~~~~Vp~~~v~sk~eLG~a~ 87 (124)
T 2fc3_A 33 TNETTKAVERGLAKLVVIAEDVDPPEIVMHLPLLCDEKKIPYVYVPSKKRLGEAA 87 (124)
T ss_dssp HHHHHHHHHTTCCSEEEEETTCSSGGGTTTHHHHHHHTTCCEEEESCHHHHHHHT
T ss_pred HHHHHHHHHcCCceEEEEcCCCChHHHHHHHHHHHHHcCCCEEEECCHHHHHHHh
Confidence 3456666777778899998888763 3456788999988887776655433
Done!