Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>009027
MVFLQLRHFNGVSHFPSQVHGKRKVSQRCICLQPQAAVPSRTRRIMESISVSGEVGGAGG
AYSYDALKRLDQIWSNICSTQTVQQEIQQVVSSNAGLFSQSDLSDKAVGTFDVIVCGGTL
GIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFN
PNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVL
LLAEGKILSSHLIIDAMGNFSPVVKQIRSGRKPDGVCLVVGSCARGFKDNSTSDVIYSSS
SVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKLEELLERYWDLMPEYQGV
TLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLST
GVYEAVRGDFVDSYSLSLLNPYMKLGDPVLRPFLQDVIKFGPLAKTLGLVMLNKPQIIPS
IFKQVGIPVLVDWSGHFFMLGYYTLLSTFADPVIRSLLNAFPPRMKYEWNRYLEAWKYGS
GLDYKL

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  009027
        (546 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2046422 - symbol:AT2G32640 species:3702 "Arabi...  1454  2.1e-191  2


>TAIR|locus:2046422 [details] [associations]
            symbol:AT2G32640 species:3702 "Arabidopsis thaliana"
            [GO:0016117 "carotenoid biosynthetic process" evidence=IEA]
            [GO:0016705 "oxidoreductase activity, acting on paired donors, with
            incorporation or reduction of molecular oxygen" evidence=IEA]
            [GO:0009507 "chloroplast" evidence=IDA] InterPro:IPR008671
            Pfam:PF05834 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
            GO:GO:0016117 GO:GO:0016705 EMBL:AK226858 IPI:IPI00520165
            RefSeq:NP_180823.3 UniGene:At.38041 ProteinModelPortal:Q0WVA1
            SMR:Q0WVA1 PRIDE:Q0WVA1 EnsemblPlants:AT2G32640.1 GeneID:817824
            KEGG:ath:AT2G32640 TAIR:At2g32640 OMA:LNPYMPN PhylomeDB:Q0WVA1
            Genevestigator:Q3EBQ1 Uniprot:Q0WVA1
        Length = 585

 Score = 1454 (516.9 bits), Expect = 2.1e-191, Sum P(2) = 2.1e-191
 Identities = 285/446 (63%), Positives = 336/446 (75%)

Query:     1 MVFLQLRHFNG-VSHFP-SQVHGKRKVSQRCICLQPQAAVPSRTRRIMXXXXXXXXXXXX 58
             MV LQ+  FNG VS    +Q +  R+ +   +C+Q Q A PS T++IM            
Sbjct:     1 MVVLQIHQFNGFVSSVSRAQTNQGRRRASTTVCVQTQLA-PSLTQKIMESISVGGEAGGA 59

Query:    59 XXXXXXDALKRLDQIWSNICXXXXXXXXXXXXXXXNAGLFSQS-DLSDKAVGTFDVIVCG 117
                   +ALKRLD IWSNIC                +G FSQ   + +  VGTFD++VCG
Sbjct:    60 GGAYSYNALKRLDNIWSNICTQPTGPQETQQIVSRVSG-FSQDYSMGNNLVGTFDIVVCG 118

Query:   118 GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATAT 177
             GTLGIF+ATAL  KGLRVA+VERN +KGR+QEWNISRKE+ EL E  +L ED+I+E  A 
Sbjct:   119 GTLGIFLATALCAKGLRVAVVERNAIKGRDQEWNISRKEMKELTEVRVLTEDEIEEVIAA 178

Query:   178 KFNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA 237
             KFNPNRCGFE  G+IWVEDILNLGVSPAKL+E VK+RFISLGGVI E  S+SSI  Y + 
Sbjct:   179 KFNPNRCGFENLGDIWVEDILNLGVSPAKLVETVKQRFISLGGVILEDSSLSSIVIYNDL 238

Query:   238 AVLLLAEGKILSSHLIIDAMGNFSPVVKQIRSGRKPDGVCLVVGSCARGFKDNSTSDVIY 297
             AV+ L++G  LSS L+IDAMGNFSP++KQI+ GRKPDG+CLVVGSCA GFK+NS+SDVIY
Sbjct:   239 AVMQLSKGDTLSSRLVIDAMGNFSPILKQIKRGRKPDGMCLVVGSCAHGFKENSSSDVIY 298

Query:   298 XXXXXXXXGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKLEELLERYWDLMPEY 357
                      DS VQLFWEAFPAGSGPLDRTTYMFTY +PQ+ SP LE+LLE YW LMP+Y
Sbjct:   299 SSSSVTRVADSNVQLFWEAFPAGSGPLDRTTYMFTYTEPQSTSPSLEDLLEEYWKLMPKY 358

Query:   358 QGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGR 417
             QGV+LD LEI RV+YGIFPTYR+SPLPAAF+R+LQFGDASGIQSPVSFGGFGSLTRHLGR
Sbjct:   359 QGVSLDELEILRVVYGIFPTYRNSPLPAAFDRVLQFGDASGIQSPVSFGGFGSLTRHLGR 418

Query:   418 LSTGVYEAVRGDFVDSYSLSLLNPYM 443
             LS G+Y+A+ GD +DS SLS LNPYM
Sbjct:   419 LSNGIYDAIDGDLLDSDSLSKLNPYM 444

 Score = 423 (154.0 bits), Expect = 2.1e-191, Sum P(2) = 2.1e-191
 Identities = 76/103 (73%), Positives = 89/103 (86%)

Query:   444 KLGDPVLRPFLQDVIKFGPLAKTLGLVMLNKPQIIPSIFKQVGIPVLVDWSGHFFMLGYY 503
             +LGDPVLRPFLQD+I+FGPLAKTLGLVML KPQIIPSIF+QVGIPVL+DWS HFFMLG Y
Sbjct:   483 RLGDPVLRPFLQDIIQFGPLAKTLGLVMLTKPQIIPSIFRQVGIPVLLDWSVHFFMLGLY 542

Query:   504 TLLSTFADPVIRSLLNAFPPRMKYEWNRYLEAWKYGSGLDYKL 546
             TLLS + DP++R  L   P + ++EW R LEAWKYG+GLDY+L
Sbjct:   543 TLLSAYIDPLLRPSLEGLPSKTRFEWKRCLEAWKYGAGLDYEL 585


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.141   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      546       505   0.00086  119 3  11 22  0.37    34
                                                     35  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  303 KB (2155 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  39.30u 0.09s 39.39t   Elapsed:  00:00:02
  Total cpu time:  39.30u 0.09s 39.39t   Elapsed:  00:00:02
  Start:  Mon May 20 18:16:10 2013   End:  Mon May 20 18:16:12 2013

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