Query 009027
Match_columns 546
No_of_seqs 343 out of 1659
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 17:10:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009027.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009027hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oz2_A Digeranylgeranylglycero 100.0 1.8E-32 6.2E-37 285.7 29.7 309 110-443 4-329 (397)
2 3cgv_A Geranylgeranyl reductas 100.0 2.5E-29 8.5E-34 263.5 32.5 305 110-443 4-329 (397)
3 3fmw_A Oxygenase; mithramycin, 100.0 6.8E-30 2.3E-34 282.7 27.2 311 109-443 48-373 (570)
4 2qa1_A PGAE, polyketide oxygen 100.0 9.5E-29 3.3E-33 269.5 32.7 303 109-443 10-328 (500)
5 2qa2_A CABE, polyketide oxygen 100.0 7.6E-29 2.6E-33 270.2 31.6 303 109-443 11-329 (499)
6 3rp8_A Flavoprotein monooxygen 100.0 2E-28 6.8E-33 259.0 28.3 304 109-443 22-349 (407)
7 3nix_A Flavoprotein/dehydrogen 100.0 4E-28 1.4E-32 257.0 24.7 305 110-430 5-330 (421)
8 3atr_A Conserved archaeal prot 100.0 2.4E-27 8.3E-32 254.9 28.8 306 110-443 6-334 (453)
9 1k0i_A P-hydroxybenzoate hydro 100.0 4.9E-27 1.7E-31 246.9 24.6 311 110-443 2-329 (394)
10 2x3n_A Probable FAD-dependent 100.0 1.5E-27 5E-32 251.5 19.8 306 110-443 6-338 (399)
11 3ihg_A RDME; flavoenzyme, anth 100.0 2.3E-26 7.9E-31 252.3 29.2 311 109-443 4-352 (535)
12 1pn0_A Phenol 2-monooxygenase; 100.0 3.1E-26 1.1E-30 257.8 30.5 307 110-443 8-402 (665)
13 3e1t_A Halogenase; flavoprotei 99.9 1.9E-26 6.5E-31 251.9 23.1 313 110-443 7-348 (512)
14 3i3l_A Alkylhalidase CMLS; fla 99.9 5.1E-26 1.7E-30 252.5 24.1 315 110-443 23-360 (591)
15 3alj_A 2-methyl-3-hydroxypyrid 99.9 3.1E-26 1.1E-30 240.1 20.1 304 110-443 11-329 (379)
16 2vou_A 2,6-dihydroxypyridine h 99.9 2.3E-25 7.7E-30 235.1 25.0 301 110-443 5-347 (397)
17 4hb9_A Similarities with proba 99.9 7.1E-26 2.4E-30 237.5 21.0 320 112-443 3-363 (412)
18 2dkh_A 3-hydroxybenzoate hydro 99.9 6.4E-25 2.2E-29 246.1 30.0 310 109-443 31-393 (639)
19 2r0c_A REBC; flavin adenine di 99.9 2E-24 6.7E-29 238.0 29.1 301 110-443 26-360 (549)
20 3c96_A Flavin-containing monoo 99.9 1.8E-24 6.2E-29 229.1 24.9 305 110-443 4-351 (410)
21 2xdo_A TETX2 protein; tetracyc 99.9 1E-23 3.4E-28 222.6 19.6 152 110-269 26-190 (398)
22 2gmh_A Electron transfer flavo 99.9 3.2E-22 1.1E-26 221.9 30.4 322 110-443 35-403 (584)
23 2weu_A Tryptophan 5-halogenase 99.9 5.8E-23 2E-27 223.8 18.2 299 110-443 2-386 (511)
24 2pyx_A Tryptophan halogenase; 99.9 5.3E-23 1.8E-27 225.3 16.8 291 110-423 7-380 (526)
25 2e4g_A Tryptophan halogenase; 99.9 4.8E-22 1.6E-26 219.0 22.3 301 110-443 25-409 (550)
26 2aqj_A Tryptophan halogenase, 99.9 1.5E-21 5.1E-26 214.3 18.7 284 110-423 5-365 (538)
27 3c4a_A Probable tryptophan hyd 99.8 7.3E-21 2.5E-25 199.6 13.6 288 112-443 2-310 (381)
28 3ihm_A Styrene monooxygenase A 99.8 1.7E-18 5.7E-23 184.9 18.5 299 109-443 21-356 (430)
29 2bry_A NEDD9 interacting prote 99.7 2.4E-16 8.3E-21 171.4 14.9 137 110-268 92-237 (497)
30 1yvv_A Amine oxidase, flavin-c 99.7 6.8E-15 2.3E-19 150.2 22.6 287 110-428 2-329 (336)
31 1ryi_A Glycine oxidase; flavop 99.5 7.9E-13 2.7E-17 137.4 20.8 70 200-270 159-229 (382)
32 2gag_B Heterotetrameric sarcos 99.4 1.3E-11 4.3E-16 129.2 24.4 71 200-271 169-241 (405)
33 1y56_B Sarcosine oxidase; dehy 99.4 3.7E-11 1.2E-15 124.9 26.3 70 200-270 144-215 (382)
34 2qcu_A Aerobic glycerol-3-phos 99.4 1.6E-10 5.4E-15 125.5 28.3 203 201-427 145-370 (501)
35 3dme_A Conserved exported prot 99.3 3.6E-11 1.2E-15 123.5 17.4 71 200-270 145-220 (369)
36 3dje_A Fructosyl amine: oxygen 99.3 5.9E-11 2E-15 126.0 17.1 63 200-262 156-222 (438)
37 3v76_A Flavoprotein; structura 99.3 3.3E-11 1.1E-15 128.1 15.0 150 109-270 26-207 (417)
38 2oln_A NIKD protein; flavoprot 99.3 7.3E-11 2.5E-15 123.5 17.1 68 201-269 149-217 (397)
39 2i0z_A NAD(FAD)-utilizing dehy 99.3 2.2E-11 7.7E-16 130.3 12.7 158 110-270 26-211 (447)
40 3nlc_A Uncharacterized protein 99.3 9.5E-11 3.3E-15 128.5 17.7 60 203-262 218-278 (549)
41 3da1_A Glycerol-3-phosphate de 99.2 2.7E-09 9.4E-14 117.5 26.3 70 201-270 166-242 (561)
42 3ps9_A TRNA 5-methylaminomethy 99.2 1.2E-10 4E-15 131.1 14.5 63 200-262 412-474 (676)
43 3nyc_A D-arginine dehydrogenas 99.2 3.4E-10 1.2E-14 117.0 16.2 70 200-270 149-219 (381)
44 2gf3_A MSOX, monomeric sarcosi 99.2 2.3E-10 8E-15 118.8 14.3 67 201-268 146-213 (389)
45 2uzz_A N-methyl-L-tryptophan o 99.2 2.8E-10 9.5E-15 117.6 14.7 62 200-262 144-205 (372)
46 2ywl_A Thioredoxin reductase r 99.1 4.5E-10 1.5E-14 104.4 14.4 117 110-269 1-118 (180)
47 3jsk_A Cypbp37 protein; octame 99.1 1.4E-10 4.7E-15 119.7 11.5 131 110-266 79-256 (344)
48 3pvc_A TRNA 5-methylaminomethy 99.1 2.7E-10 9.2E-15 128.5 14.0 63 200-262 407-470 (689)
49 1rp0_A ARA6, thiazole biosynth 99.1 3.5E-10 1.2E-14 113.7 12.7 131 110-266 39-196 (284)
50 3c4n_A Uncharacterized protein 99.1 1.2E-10 4E-15 122.9 9.7 71 200-271 167-248 (405)
51 2gqf_A Hypothetical protein HI 99.1 5.8E-10 2E-14 117.8 14.5 156 110-270 4-188 (401)
52 3kkj_A Amine oxidase, flavin-c 99.0 6.1E-08 2.1E-12 92.3 24.1 36 110-145 2-38 (336)
53 4a9w_A Monooxygenase; baeyer-v 99.0 2.7E-09 9.1E-14 108.8 14.7 128 110-262 3-133 (357)
54 1qo8_A Flavocytochrome C3 fuma 99.0 2.2E-09 7.7E-14 118.2 14.5 153 109-265 120-316 (566)
55 2gjc_A Thiazole biosynthetic e 99.0 2.2E-09 7.5E-14 110.1 11.9 132 110-267 65-245 (326)
56 2q0l_A TRXR, thioredoxin reduc 99.0 5E-09 1.7E-13 105.4 14.4 113 110-262 1-115 (311)
57 2cul_A Glucose-inhibited divis 99.0 5.3E-09 1.8E-13 101.8 14.1 125 110-267 3-131 (232)
58 1pj5_A N,N-dimethylglycine oxi 99.0 6.5E-09 2.2E-13 119.6 16.7 69 200-269 146-216 (830)
59 1y0p_A Fumarate reductase flav 99.0 7.1E-09 2.4E-13 114.3 15.9 150 110-263 126-319 (571)
60 3ab1_A Ferredoxin--NADP reduct 98.9 8.1E-09 2.8E-13 106.4 13.7 119 110-264 14-134 (360)
61 3cp8_A TRNA uridine 5-carboxym 98.9 4.9E-09 1.7E-13 116.3 12.7 142 109-262 20-175 (641)
62 3axb_A Putative oxidoreductase 98.9 5.4E-09 1.9E-13 111.2 11.8 70 200-270 176-264 (448)
63 2gv8_A Monooxygenase; FMO, FAD 98.9 1.1E-08 3.9E-13 109.0 14.2 145 110-262 6-178 (447)
64 2zbw_A Thioredoxin reductase; 98.9 1.3E-08 4.5E-13 103.4 13.9 118 110-263 5-123 (335)
65 2zxi_A TRNA uridine 5-carboxym 98.9 7.6E-09 2.6E-13 114.5 12.8 141 110-262 27-181 (637)
66 3ces_A MNMG, tRNA uridine 5-ca 98.9 1.2E-08 4.1E-13 113.2 14.4 141 110-262 28-182 (651)
67 4at0_A 3-ketosteroid-delta4-5a 98.9 3.3E-08 1.1E-12 107.4 17.2 56 206-261 203-264 (510)
68 2q7v_A Thioredoxin reductase; 98.8 1.7E-08 5.7E-13 102.4 12.6 112 110-261 8-123 (325)
69 1kf6_A Fumarate reductase flav 98.8 3.9E-08 1.3E-12 109.1 15.9 63 204-266 133-202 (602)
70 2rgh_A Alpha-glycerophosphate 98.8 1.3E-07 4.3E-12 104.4 18.9 68 201-268 184-258 (571)
71 3cty_A Thioredoxin reductase; 98.8 3.5E-08 1.2E-12 99.8 13.1 111 109-261 15-126 (319)
72 3fbs_A Oxidoreductase; structu 98.8 5.6E-08 1.9E-12 96.5 13.5 110 110-262 2-113 (297)
73 1w4x_A Phenylacetone monooxyge 98.8 2.4E-08 8.3E-13 109.3 11.9 134 110-262 16-155 (542)
74 1vdc_A NTR, NADPH dependent th 98.8 1.8E-08 6.1E-13 102.3 10.0 117 110-262 8-125 (333)
75 2a87_A TRXR, TR, thioredoxin r 98.8 4.2E-08 1.4E-12 100.1 12.7 111 110-261 14-126 (335)
76 3f8d_A Thioredoxin reductase ( 98.8 5.3E-08 1.8E-12 97.8 13.3 110 110-261 15-125 (323)
77 3gwf_A Cyclohexanone monooxyge 98.8 4.1E-08 1.4E-12 107.6 13.3 133 110-261 8-147 (540)
78 3itj_A Thioredoxin reductase 1 98.8 2.5E-08 8.5E-13 101.0 10.8 118 109-261 21-142 (338)
79 3qj4_A Renalase; FAD/NAD(P)-bi 98.7 5.1E-08 1.7E-12 99.8 12.8 41 218-258 122-162 (342)
80 1d4d_A Flavocytochrome C fumar 98.7 1.2E-07 4.1E-12 104.6 16.5 61 203-263 253-319 (572)
81 4ap3_A Steroid monooxygenase; 98.7 2.8E-08 9.7E-13 109.1 11.3 134 109-261 20-159 (549)
82 3d1c_A Flavin-containing putat 98.7 1E-07 3.4E-12 98.1 13.9 136 110-261 4-143 (369)
83 1chu_A Protein (L-aspartate ox 98.7 3.1E-08 1.1E-12 108.6 10.5 59 205-263 138-210 (540)
84 3lzw_A Ferredoxin--NADP reduct 98.7 6.2E-08 2.1E-12 97.8 11.8 115 110-261 7-123 (332)
85 2h88_A Succinate dehydrogenase 98.7 1.4E-07 4.9E-12 104.9 15.7 60 204-263 154-219 (621)
86 4fk1_A Putative thioredoxin re 98.7 1.1E-07 3.6E-12 95.9 13.2 109 110-260 6-116 (304)
87 1trb_A Thioredoxin reductase; 98.7 7.9E-08 2.7E-12 96.8 11.1 111 110-261 5-116 (320)
88 2wdq_A Succinate dehydrogenase 98.7 2.1E-07 7.2E-12 103.0 15.3 59 205-263 143-208 (588)
89 2e5v_A L-aspartate oxidase; ar 98.6 2.3E-07 7.7E-12 100.0 14.5 61 204-265 118-180 (472)
90 1c0p_A D-amino acid oxidase; a 98.6 3.3E-08 1.1E-12 102.0 7.4 140 109-262 5-186 (363)
91 1fl2_A Alkyl hydroperoxide red 98.6 1.2E-07 4.2E-12 95.1 11.3 111 110-261 1-115 (310)
92 3uox_A Otemo; baeyer-villiger 98.6 1.2E-07 4E-12 104.1 11.8 134 110-261 9-147 (545)
93 3ka7_A Oxidoreductase; structu 98.6 2.7E-07 9.2E-12 96.9 14.1 58 205-263 196-254 (425)
94 2bs2_A Quinol-fumarate reducta 98.6 3.1E-07 1.1E-11 102.8 15.1 60 204-263 157-222 (660)
95 4a5l_A Thioredoxin reductase; 98.6 2E-07 7E-12 93.5 12.3 115 110-260 4-120 (314)
96 2xve_A Flavin-containing monoo 98.6 1.8E-07 6.1E-12 100.5 12.3 145 111-262 3-167 (464)
97 4dgk_A Phytoene dehydrogenase; 98.6 4E-07 1.4E-11 98.0 14.5 61 206-266 222-283 (501)
98 3i6d_A Protoporphyrinogen oxid 98.5 1.7E-07 5.7E-12 99.6 10.0 42 220-261 248-289 (470)
99 1jnr_A Adenylylsulfate reducta 98.5 5E-07 1.7E-11 101.0 13.4 153 110-262 22-219 (643)
100 3nrn_A Uncharacterized protein 98.5 3.3E-07 1.1E-11 96.5 11.4 56 205-262 189-244 (421)
101 3s5w_A L-ornithine 5-monooxyge 98.5 1.2E-07 4.2E-12 101.1 7.9 143 109-261 29-192 (463)
102 1hyu_A AHPF, alkyl hydroperoxi 98.5 4.7E-07 1.6E-11 98.6 12.5 112 109-261 211-326 (521)
103 3k7m_X 6-hydroxy-L-nicotine ox 98.5 2.4E-07 8.1E-12 97.7 9.5 44 215-259 214-257 (431)
104 3gyx_A Adenylylsulfate reducta 98.4 7E-07 2.4E-11 100.0 11.9 59 204-262 165-234 (662)
105 4gcm_A TRXR, thioredoxin reduc 98.4 1.6E-06 5.3E-11 87.3 13.2 111 108-260 4-115 (312)
106 3r9u_A Thioredoxin reductase; 98.4 1.7E-06 6E-11 86.3 13.4 109 110-260 4-117 (315)
107 3g3e_A D-amino-acid oxidase; F 98.4 2.9E-08 1E-12 101.9 -0.5 51 200-262 137-187 (351)
108 2a8x_A Dihydrolipoyl dehydroge 98.4 1.7E-07 5.9E-12 100.3 5.3 139 110-262 3-147 (464)
109 1dxl_A Dihydrolipoamide dehydr 98.4 3.6E-07 1.2E-11 97.8 7.2 143 109-263 5-153 (470)
110 3o0h_A Glutathione reductase; 98.4 8.9E-07 3.1E-11 95.4 9.7 58 206-263 233-290 (484)
111 1ojt_A Surface protein; redox- 98.3 3.6E-07 1.2E-11 98.4 6.4 141 110-262 6-161 (482)
112 2vvm_A Monoamine oxidase N; FA 98.3 5.9E-06 2E-10 88.7 15.2 56 206-261 256-312 (495)
113 2ivd_A PPO, PPOX, protoporphyr 98.3 2.3E-06 7.7E-11 91.5 11.8 43 219-261 249-294 (478)
114 1v59_A Dihydrolipoamide dehydr 98.3 4E-07 1.4E-11 97.8 5.5 140 110-261 5-157 (478)
115 3nks_A Protoporphyrinogen oxid 98.2 3.2E-06 1.1E-10 90.2 10.4 54 206-260 235-289 (477)
116 1s3e_A Amine oxidase [flavin-c 98.2 1E-05 3.4E-10 87.7 14.3 44 218-261 225-268 (520)
117 1ebd_A E3BD, dihydrolipoamide 98.2 1E-06 3.6E-11 94.0 6.5 135 110-261 3-145 (455)
118 2v3a_A Rubredoxin reductase; a 98.2 1.2E-05 4E-10 83.8 12.5 106 111-270 146-254 (384)
119 3lov_A Protoporphyrinogen oxid 98.1 1.1E-05 3.9E-10 85.9 12.5 41 220-261 249-289 (475)
120 1zmd_A Dihydrolipoyl dehydroge 98.1 2.4E-06 8.3E-11 91.6 6.5 142 110-261 6-152 (474)
121 1q1r_A Putidaredoxin reductase 98.1 3.8E-06 1.3E-10 89.1 7.8 108 110-261 4-114 (431)
122 1xdi_A RV3303C-LPDA; reductase 98.1 7.3E-06 2.5E-10 88.6 8.9 58 206-263 224-281 (499)
123 2yg5_A Putrescine oxidase; oxi 98.0 3.7E-05 1.3E-09 81.4 13.9 43 217-260 224-267 (453)
124 4gut_A Lysine-specific histone 98.0 1.6E-05 5.5E-10 90.5 11.1 41 218-258 542-582 (776)
125 3lad_A Dihydrolipoamide dehydr 98.0 5.1E-06 1.7E-10 89.1 6.3 34 110-143 3-37 (476)
126 2qae_A Lipoamide, dihydrolipoy 98.0 9.5E-06 3.2E-10 86.8 8.0 139 110-261 2-148 (468)
127 3l8k_A Dihydrolipoyl dehydroge 98.0 2.2E-05 7.4E-10 84.1 10.7 133 110-260 4-143 (466)
128 3urh_A Dihydrolipoyl dehydroge 98.0 1.4E-05 4.8E-10 86.1 9.1 139 110-260 25-169 (491)
129 3qfa_A Thioredoxin reductase 1 98.0 6E-05 2.1E-09 81.9 14.1 34 109-142 31-65 (519)
130 2yqu_A 2-oxoglutarate dehydrog 98.0 4.6E-05 1.6E-09 81.1 12.7 98 111-263 168-266 (455)
131 2eq6_A Pyruvate dehydrogenase 97.9 5.3E-05 1.8E-09 81.0 12.9 98 111-263 170-273 (464)
132 4b63_A L-ornithine N5 monooxyg 97.9 2E-05 6.7E-10 85.4 9.3 58 202-259 142-212 (501)
133 2cdu_A NADPH oxidase; flavoenz 97.9 1E-05 3.6E-10 86.1 7.0 111 111-261 1-117 (452)
134 3cgb_A Pyridine nucleotide-dis 97.9 1.7E-05 5.9E-10 85.2 7.9 110 110-261 36-152 (480)
135 2yqu_A 2-oxoglutarate dehydrog 97.9 7.7E-06 2.6E-10 87.2 4.5 138 110-261 1-141 (455)
136 3lxd_A FAD-dependent pyridine 97.9 2.2E-05 7.6E-10 82.5 8.0 107 110-260 9-118 (415)
137 3dgz_A Thioredoxin reductase 2 97.8 7.9E-05 2.7E-09 80.1 12.4 33 109-141 5-38 (488)
138 1ges_A Glutathione reductase; 97.8 8.9E-05 3E-09 78.9 12.5 97 112-263 169-267 (450)
139 2bc0_A NADH oxidase; flavoprot 97.8 8.8E-06 3E-10 87.8 4.6 110 110-261 35-149 (490)
140 3sx6_A Sulfide-quinone reducta 97.8 1.7E-05 6E-10 84.0 6.6 106 110-262 4-113 (437)
141 2hqm_A GR, grase, glutathione 97.8 3E-05 1E-09 83.4 8.3 137 110-260 11-159 (479)
142 3kd9_A Coenzyme A disulfide re 97.8 5.3E-05 1.8E-09 80.5 10.0 106 110-260 3-113 (449)
143 3dgh_A TRXR-1, thioredoxin red 97.8 9.1E-05 3.1E-09 79.5 11.8 33 109-141 8-41 (483)
144 1nhp_A NADH peroxidase; oxidor 97.8 2.9E-05 1E-09 82.5 7.3 109 111-261 1-115 (447)
145 3oc4_A Oxidoreductase, pyridin 97.8 3.1E-05 1.1E-09 82.4 7.2 108 111-260 3-114 (452)
146 3dk9_A Grase, GR, glutathione 97.7 3.8E-05 1.3E-09 82.3 7.4 36 110-145 20-56 (478)
147 1zk7_A HGII, reductase, mercur 97.7 8.6E-05 3E-09 79.3 10.1 35 110-144 4-39 (467)
148 4dna_A Probable glutathione re 97.7 3.9E-05 1.3E-09 81.9 7.2 35 110-144 5-40 (463)
149 3fg2_P Putative rubredoxin red 97.7 0.00038 1.3E-08 72.8 14.6 105 112-270 144-252 (404)
150 2r9z_A Glutathione amide reduc 97.7 0.00015 5.1E-09 77.5 11.3 97 112-263 168-266 (463)
151 3klj_A NAD(FAD)-dependent dehy 97.7 4E-05 1.4E-09 80.1 6.6 106 110-260 9-115 (385)
152 2eq6_A Pyruvate dehydrogenase 97.7 6.1E-05 2.1E-09 80.6 8.1 36 110-145 6-42 (464)
153 3fg2_P Putative rubredoxin red 97.7 6.1E-05 2.1E-09 78.9 7.8 105 111-260 2-109 (404)
154 1xhc_A NADH oxidase /nitrite r 97.7 3.2E-05 1.1E-09 80.2 5.6 103 111-260 9-112 (367)
155 3fpz_A Thiazole biosynthetic e 97.7 2.4E-05 8.3E-10 79.5 4.5 43 385-427 281-325 (326)
156 3ics_A Coenzyme A-disulfide re 97.7 7.4E-05 2.5E-09 82.2 8.6 110 110-260 36-151 (588)
157 2bcg_G Secretory pathway GDP d 97.6 3.7E-05 1.3E-09 82.0 5.6 56 206-262 243-301 (453)
158 3h8l_A NADH oxidase; membrane 97.6 3.4E-05 1.2E-09 80.8 5.3 104 111-261 2-113 (409)
159 1ebd_A E3BD, dihydrolipoamide 97.6 0.00027 9.1E-09 75.2 12.3 98 111-263 171-272 (455)
160 3h28_A Sulfide-quinone reducta 97.6 1.8E-05 6.2E-10 83.6 3.0 105 110-261 2-109 (430)
161 3k30_A Histamine dehydrogenase 97.6 0.00031 1.1E-08 79.0 13.1 52 208-261 570-624 (690)
162 3iwa_A FAD-dependent pyridine 97.6 0.00013 4.3E-09 78.1 9.4 116 110-260 3-124 (472)
163 1v59_A Dihydrolipoamide dehydr 97.6 0.00034 1.2E-08 74.8 12.8 98 111-263 184-289 (478)
164 1y56_A Hypothetical protein PH 97.6 7.7E-05 2.6E-09 80.5 7.6 108 110-261 108-219 (493)
165 3lxd_A FAD-dependent pyridine 97.6 0.00042 1.4E-08 72.7 13.1 105 112-270 154-262 (415)
166 1fec_A Trypanothione reductase 97.6 0.00013 4.4E-09 78.6 9.3 31 110-140 3-35 (490)
167 3iwa_A FAD-dependent pyridine 97.6 0.00054 1.8E-08 73.2 13.7 106 111-270 160-269 (472)
168 3ef6_A Toluene 1,2-dioxygenase 97.6 6E-05 2.1E-09 79.2 6.0 105 111-260 3-110 (410)
169 4gde_A UDP-galactopyranose mut 97.6 3.5E-05 1.2E-09 82.7 4.0 53 205-259 222-274 (513)
170 2gqw_A Ferredoxin reductase; f 97.5 0.00021 7.1E-09 75.1 9.7 104 110-261 7-113 (408)
171 1onf_A GR, grase, glutathione 97.5 5.3E-05 1.8E-09 81.8 5.2 34 110-143 2-36 (500)
172 1mo9_A ORF3; nucleotide bindin 97.5 0.00035 1.2E-08 75.9 11.5 34 110-143 43-77 (523)
173 4b1b_A TRXR, thioredoxin reduc 97.5 0.00012 4.1E-09 80.0 7.8 37 107-143 39-76 (542)
174 2r9z_A Glutathione amide reduc 97.5 0.00019 6.4E-09 76.8 9.0 34 110-143 4-38 (463)
175 2v3a_A Rubredoxin reductase; a 97.5 0.0002 6.7E-09 74.4 8.7 106 110-261 4-113 (384)
176 1mo9_A ORF3; nucleotide bindin 97.5 0.00048 1.7E-08 74.7 11.8 105 111-270 215-328 (523)
177 2x8g_A Thioredoxin glutathione 97.5 0.0019 6.7E-08 71.0 16.8 34 108-141 105-139 (598)
178 1nhp_A NADH peroxidase; oxidor 97.5 0.00035 1.2E-08 74.1 10.4 97 110-262 149-247 (447)
179 3ef6_A Toluene 1,2-dioxygenase 97.5 0.00036 1.2E-08 73.2 10.1 106 111-270 144-252 (410)
180 1q1r_A Putidaredoxin reductase 97.4 0.00084 2.9E-08 70.9 12.7 105 112-270 151-261 (431)
181 2hqm_A GR, grase, glutathione 97.4 0.0011 3.6E-08 71.1 13.4 97 112-263 187-287 (479)
182 1lvl_A Dihydrolipoamide dehydr 97.4 0.0003 1E-08 75.0 9.0 34 110-143 5-39 (458)
183 2qae_A Lipoamide, dihydrolipoy 97.4 0.00068 2.3E-08 72.3 11.8 103 112-269 176-288 (468)
184 3ntd_A FAD-dependent pyridine 97.4 0.00017 5.9E-09 78.7 6.8 109 111-260 2-116 (565)
185 1zmd_A Dihydrolipoyl dehydroge 97.4 0.001 3.5E-08 71.0 12.7 105 112-270 180-295 (474)
186 2gag_A Heterotetrameric sarcos 97.4 0.00045 1.5E-08 80.6 10.4 108 110-260 128-252 (965)
187 1onf_A GR, grase, glutathione 97.4 0.0013 4.4E-08 71.0 13.2 97 112-263 178-277 (500)
188 2wpf_A Trypanothione reductase 97.4 0.00018 6E-09 77.7 6.4 31 110-140 7-39 (495)
189 2gqw_A Ferredoxin reductase; f 97.3 0.0014 4.7E-08 68.7 12.9 102 111-270 146-250 (408)
190 1ojt_A Surface protein; redox- 97.3 0.001 3.5E-08 71.3 11.6 98 111-263 186-288 (482)
191 1m6i_A Programmed cell death p 97.3 0.00032 1.1E-08 75.7 7.6 43 217-261 102-144 (493)
192 1fec_A Trypanothione reductase 97.3 0.0011 3.8E-08 71.3 11.8 98 111-263 188-290 (490)
193 3p1w_A Rabgdi protein; GDI RAB 97.3 0.00017 5.9E-09 77.4 5.2 55 206-260 257-313 (475)
194 3urh_A Dihydrolipoyl dehydroge 97.3 0.0018 6.2E-08 69.5 13.3 97 112-263 200-302 (491)
195 3ntd_A FAD-dependent pyridine 97.3 0.0017 5.8E-08 70.8 13.2 104 112-270 153-278 (565)
196 3oc4_A Oxidoreductase, pyridin 97.3 0.0016 5.5E-08 69.1 12.7 96 112-262 149-245 (452)
197 1m6i_A Programmed cell death p 97.3 0.002 6.7E-08 69.4 13.4 105 112-270 182-293 (493)
198 1dxl_A Dihydrolipoamide dehydr 97.3 0.00078 2.7E-08 71.8 10.0 98 111-263 178-281 (470)
199 2a8x_A Dihydrolipoyl dehydroge 97.3 0.0021 7.3E-08 68.3 13.3 104 111-269 172-283 (464)
200 1zk7_A HGII, reductase, mercur 97.2 0.0019 6.6E-08 68.7 13.0 95 112-263 178-273 (467)
201 2cdu_A NADPH oxidase; flavoenz 97.2 0.003 1E-07 66.9 14.2 96 112-262 151-248 (452)
202 3cgb_A Pyridine nucleotide-dis 97.2 0.0022 7.5E-08 68.7 13.2 96 110-262 186-283 (480)
203 1trb_A Thioredoxin reductase; 97.2 0.0024 8.1E-08 63.7 12.5 92 112-260 147-246 (320)
204 3t37_A Probable dehydrogenase; 97.2 0.00021 7.3E-09 77.2 5.1 36 109-144 16-53 (526)
205 2wpf_A Trypanothione reductase 97.2 0.0023 7.7E-08 69.0 13.0 97 112-263 193-294 (495)
206 1lvl_A Dihydrolipoamide dehydr 97.2 0.0012 4E-08 70.4 10.1 96 111-263 172-270 (458)
207 1v0j_A UDP-galactopyranose mut 97.2 0.00028 9.6E-09 73.9 5.0 35 110-144 7-43 (399)
208 2b9w_A Putative aminooxidase; 97.1 0.00037 1.3E-08 72.9 5.8 43 217-260 215-257 (424)
209 3hdq_A UDP-galactopyranose mut 97.1 0.00037 1.3E-08 73.2 5.6 36 109-144 28-64 (397)
210 2jae_A L-amino acid oxidase; o 97.1 0.0004 1.4E-08 74.3 5.8 52 207-260 241-295 (489)
211 3ic9_A Dihydrolipoamide dehydr 97.1 0.0035 1.2E-07 67.4 13.1 96 111-262 175-275 (492)
212 4b1b_A TRXR, thioredoxin reduc 97.1 0.0036 1.2E-07 68.3 13.2 97 112-264 225-322 (542)
213 1d5t_A Guanine nucleotide diss 97.1 0.00045 1.5E-08 73.2 5.6 57 206-262 235-291 (433)
214 1i8t_A UDP-galactopyranose mut 97.0 0.00034 1.2E-08 72.4 4.4 35 110-144 1-36 (367)
215 1sez_A Protoporphyrinogen oxid 97.0 0.00043 1.5E-08 74.3 5.1 57 110-166 13-86 (504)
216 3lad_A Dihydrolipoamide dehydr 97.0 0.0034 1.2E-07 66.9 12.2 97 111-262 181-281 (476)
217 1kdg_A CDH, cellobiose dehydro 97.0 0.00047 1.6E-08 75.2 5.3 35 109-143 6-41 (546)
218 2bc0_A NADH oxidase; flavoprot 97.0 0.0033 1.1E-07 67.4 11.9 96 111-262 195-292 (490)
219 3ic9_A Dihydrolipoamide dehydr 97.0 0.00044 1.5E-08 74.5 4.8 36 110-145 8-44 (492)
220 1xhc_A NADH oxidase /nitrite r 97.0 0.0024 8.2E-08 66.0 10.1 97 112-269 145-244 (367)
221 1rsg_A FMS1 protein; FAD bindi 97.0 0.00045 1.6E-08 74.6 4.6 41 220-260 215-256 (516)
222 4dna_A Probable glutathione re 96.9 0.0039 1.3E-07 66.3 11.7 96 111-262 171-269 (463)
223 2e1m_A L-glutamate oxidase; L- 96.9 0.00067 2.3E-08 70.7 5.5 35 110-144 44-80 (376)
224 3dgh_A TRXR-1, thioredoxin red 96.9 0.0057 1.9E-07 65.4 12.5 94 112-261 189-289 (483)
225 3d1c_A Flavin-containing putat 96.9 0.0045 1.6E-07 62.9 11.2 102 112-261 168-272 (369)
226 3q9t_A Choline dehydrogenase a 96.9 0.00062 2.1E-08 75.0 4.6 35 109-143 5-41 (577)
227 3itj_A Thioredoxin reductase 1 96.8 0.0039 1.3E-07 62.4 9.9 89 111-260 174-270 (338)
228 3pl8_A Pyranose 2-oxidase; sub 96.8 0.00086 2.9E-08 74.5 5.4 36 110-145 46-82 (623)
229 3s5w_A L-ornithine 5-monooxyge 96.8 0.011 3.6E-07 62.6 13.7 132 110-260 227-376 (463)
230 3hyw_A Sulfide-quinone reducta 96.8 0.0017 5.9E-08 68.5 7.2 102 112-260 4-108 (430)
231 1ju2_A HydroxynitrIle lyase; f 96.8 0.0006 2E-08 74.4 3.4 34 110-144 26-60 (536)
232 2iid_A L-amino-acid oxidase; f 96.7 0.00096 3.3E-08 71.4 4.8 40 221-260 254-297 (498)
233 2q0l_A TRXR, thioredoxin reduc 96.7 0.014 4.7E-07 57.8 13.0 89 111-260 144-240 (311)
234 3g5s_A Methylenetetrahydrofola 96.7 0.0015 5.1E-08 68.3 5.8 34 111-144 2-36 (443)
235 3dk9_A Grase, GR, glutathione 96.7 0.012 4.1E-07 62.7 13.2 96 112-262 189-294 (478)
236 4eqs_A Coenzyme A disulfide re 96.7 0.0071 2.4E-07 64.0 11.2 108 113-261 3-116 (437)
237 3ics_A Coenzyme A-disulfide re 96.7 0.0075 2.6E-07 66.1 11.6 102 112-270 189-293 (588)
238 3ab1_A Ferredoxin--NADP reduct 96.7 0.0054 1.8E-07 62.4 9.6 93 112-261 165-263 (360)
239 2bi7_A UDP-galactopyranose mut 96.7 0.0014 4.7E-08 68.3 5.1 36 110-145 3-39 (384)
240 3vrd_B FCCB subunit, flavocyto 96.6 0.0071 2.4E-07 62.7 10.3 102 112-261 4-108 (401)
241 3qvp_A Glucose oxidase; oxidor 96.6 0.0012 4.1E-08 72.7 4.5 34 109-142 18-53 (583)
242 2zbw_A Thioredoxin reductase; 96.6 0.016 5.4E-07 58.1 12.5 93 112-261 154-252 (335)
243 1ges_A Glutathione reductase; 96.6 0.0012 4E-08 70.2 4.2 34 110-143 4-38 (450)
244 3kd9_A Coenzyme A disulfide re 96.6 0.012 4.2E-07 62.1 12.1 103 112-270 150-255 (449)
245 4dsg_A UDP-galactopyranose mut 96.6 0.0018 6.2E-08 69.6 5.4 36 110-145 9-46 (484)
246 3dgz_A Thioredoxin reductase 2 96.5 0.017 5.8E-07 61.8 13.0 95 112-262 187-288 (488)
247 1b37_A Protein (polyamine oxid 96.4 0.0021 7.2E-08 68.4 5.0 55 206-260 207-269 (472)
248 2vdc_G Glutamate synthase [NAD 96.4 0.0024 8.2E-08 68.2 5.4 36 110-145 122-158 (456)
249 1vg0_A RAB proteins geranylger 96.4 0.0027 9.3E-08 70.5 5.9 53 206-258 379-434 (650)
250 3r9u_A Thioredoxin reductase; 96.4 0.024 8.2E-07 55.8 12.1 89 112-260 149-243 (315)
251 3fim_B ARYL-alcohol oxidase; A 96.4 0.0015 5.2E-08 71.7 3.4 35 110-144 2-38 (566)
252 3cty_A Thioredoxin reductase; 96.3 0.023 7.8E-07 56.6 11.6 88 112-260 157-251 (319)
253 1fl2_A Alkyl hydroperoxide red 96.3 0.022 7.4E-07 56.4 11.2 88 112-260 146-241 (310)
254 1o94_A Tmadh, trimethylamine d 96.1 0.0048 1.6E-07 69.8 6.0 37 108-144 387-424 (729)
255 4eqs_A Coenzyme A disulfide re 96.1 0.014 4.9E-07 61.6 9.3 91 112-261 149-240 (437)
256 3l8k_A Dihydrolipoyl dehydroge 96.1 0.035 1.2E-06 59.0 12.3 95 112-263 174-274 (466)
257 2q7v_A Thioredoxin reductase; 96.1 0.041 1.4E-06 54.9 12.2 88 112-260 154-248 (325)
258 1n4w_A CHOD, cholesterol oxida 96.1 0.004 1.4E-07 67.2 4.7 33 110-142 5-38 (504)
259 1ps9_A 2,4-dienoyl-COA reducta 96.1 0.0051 1.8E-07 68.7 5.8 38 108-145 371-409 (671)
260 1coy_A Cholesterol oxidase; ox 96.1 0.0047 1.6E-07 66.7 5.2 34 109-142 10-44 (507)
261 3qfa_A Thioredoxin reductase 1 96.0 0.064 2.2E-06 57.9 13.9 95 112-262 212-316 (519)
262 3f8d_A Thioredoxin reductase ( 96.0 0.04 1.4E-06 54.4 11.3 90 111-261 155-251 (323)
263 2jbv_A Choline oxidase; alcoho 96.0 0.0045 1.6E-07 67.5 4.7 36 109-144 12-49 (546)
264 2x8g_A Thioredoxin glutathione 95.9 0.065 2.2E-06 58.7 13.9 96 112-263 288-397 (598)
265 1gpe_A Protein (glucose oxidas 95.9 0.005 1.7E-07 67.8 4.8 36 109-144 23-60 (587)
266 2z3y_A Lysine-specific histone 95.8 0.0076 2.6E-07 67.3 5.9 40 219-258 410-455 (662)
267 3fbs_A Oxidoreductase; structu 95.8 0.014 4.7E-07 57.1 6.8 83 111-260 142-225 (297)
268 1vdc_A NTR, NADPH dependent th 95.7 0.056 1.9E-06 53.9 11.3 88 112-260 161-258 (333)
269 3lzw_A Ferredoxin--NADP reduct 95.7 0.028 9.6E-07 55.8 8.9 88 112-260 156-249 (332)
270 4g6h_A Rotenone-insensitive NA 95.7 0.015 5E-07 62.8 7.2 33 110-142 42-75 (502)
271 3gwf_A Cyclohexanone monooxyge 95.6 0.06 2.1E-06 58.5 11.5 50 112-161 180-231 (540)
272 2xag_A Lysine-specific histone 95.5 0.012 4.2E-07 67.5 6.1 40 219-258 581-626 (852)
273 1cjc_A Protein (adrenodoxin re 95.4 0.099 3.4E-06 55.6 12.4 48 111-162 146-215 (460)
274 1gte_A Dihydropyrimidine dehyd 95.4 0.011 3.8E-07 69.3 5.1 35 110-144 187-223 (1025)
275 4g6h_A Rotenone-insensitive NA 95.2 0.049 1.7E-06 58.7 9.4 53 206-260 273-331 (502)
276 1cjc_A Protein (adrenodoxin re 95.2 0.014 4.8E-07 62.2 4.9 36 110-145 6-44 (460)
277 2a87_A TRXR, TR, thioredoxin r 95.2 0.058 2E-06 54.1 9.1 89 111-260 156-251 (335)
278 3uox_A Otemo; baeyer-villiger 95.1 0.012 4.3E-07 64.0 4.4 32 112-143 187-219 (545)
279 1lqt_A FPRA; NADP+ derivative, 95.1 0.013 4.4E-07 62.4 4.3 36 110-145 3-46 (456)
280 3klj_A NAD(FAD)-dependent dehy 94.9 0.016 5.3E-07 60.3 4.2 83 112-261 148-231 (385)
281 1hyu_A AHPF, alkyl hydroperoxi 94.2 0.18 6.3E-06 54.3 10.8 87 112-259 357-451 (521)
282 4ap3_A Steroid monooxygenase; 94.1 0.094 3.2E-06 57.1 8.2 32 112-143 193-225 (549)
283 1lqt_A FPRA; NADP+ derivative, 93.9 0.11 3.7E-06 55.2 8.1 130 111-260 148-325 (456)
284 3ayj_A Pro-enzyme of L-phenyla 93.6 0.034 1.2E-06 62.5 3.4 33 110-142 56-97 (721)
285 1ps9_A 2,4-dienoyl-COA reducta 93.4 0.32 1.1E-05 54.1 11.0 50 209-261 577-628 (671)
286 3h8l_A NADH oxidase; membrane 93.2 0.3 1E-05 50.4 9.8 50 207-260 220-269 (409)
287 1gte_A Dihydropyrimidine dehyd 92.6 0.62 2.1E-05 54.5 12.4 31 112-142 334-366 (1025)
288 1o94_A Tmadh, trimethylamine d 92.5 0.44 1.5E-05 53.6 10.6 93 112-261 530-646 (729)
289 3fwz_A Inner membrane protein 92.3 0.15 5.3E-06 44.5 5.2 32 111-142 8-40 (140)
290 2g1u_A Hypothetical protein TM 92.1 0.14 4.7E-06 45.6 4.7 32 111-142 20-52 (155)
291 2gv8_A Monooxygenase; FMO, FAD 92.0 0.16 5.5E-06 53.4 5.9 31 112-142 214-246 (447)
292 2gag_A Heterotetrameric sarcos 91.8 0.3 1E-05 56.8 8.3 93 112-268 286-392 (965)
293 3llv_A Exopolyphosphatase-rela 91.6 0.15 5.1E-06 44.4 4.2 31 112-142 8-39 (141)
294 1lss_A TRK system potassium up 91.1 0.19 6.3E-06 43.2 4.3 32 111-142 5-37 (140)
295 2xve_A Flavin-containing monoo 90.7 0.54 1.8E-05 49.8 8.4 31 112-142 199-230 (464)
296 1d5t_A Guanine nucleotide diss 90.4 0.26 9E-06 51.6 5.5 36 110-145 6-42 (433)
297 3p1w_A Rabgdi protein; GDI RAB 90.3 0.37 1.3E-05 51.4 6.6 37 109-145 19-56 (475)
298 3sx6_A Sulfide-quinone reducta 89.9 1.6 5.4E-05 45.5 11.1 55 209-265 212-275 (437)
299 3ic5_A Putative saccharopine d 89.5 0.26 9.1E-06 40.8 3.8 32 111-142 6-39 (118)
300 1b37_A Protein (polyamine oxid 89.5 0.36 1.2E-05 50.9 5.7 35 110-144 4-40 (472)
301 4a9w_A Monooxygenase; baeyer-v 89.4 0.24 8.2E-06 49.3 4.0 31 111-142 164-195 (357)
302 2hmt_A YUAA protein; RCK, KTN, 89.0 0.32 1.1E-05 41.7 4.1 31 112-142 8-39 (144)
303 1jw9_B Molybdopterin biosynthe 89.0 0.3 1E-05 47.4 4.3 33 111-143 32-66 (249)
304 1id1_A Putative potassium chan 88.9 0.4 1.4E-05 42.3 4.8 31 112-142 5-36 (153)
305 2bcg_G Secretory pathway GDP d 88.7 0.64 2.2E-05 49.0 7.0 37 109-145 10-47 (453)
306 3c85_A Putative glutathione-re 88.4 0.29 9.9E-06 44.6 3.5 31 112-142 41-73 (183)
307 3l4b_C TRKA K+ channel protien 87.9 0.39 1.3E-05 45.1 4.2 31 112-142 2-33 (218)
308 3ado_A Lambda-crystallin; L-gu 87.3 0.44 1.5E-05 48.1 4.4 31 112-142 8-39 (319)
309 1f0y_A HCDH, L-3-hydroxyacyl-C 87.1 0.55 1.9E-05 46.6 4.9 31 112-142 17-48 (302)
310 3eag_A UDP-N-acetylmuramate:L- 86.8 0.93 3.2E-05 45.6 6.6 44 112-165 6-51 (326)
311 3i83_A 2-dehydropantoate 2-red 86.8 0.59 2E-05 46.9 5.0 31 112-142 4-35 (320)
312 4gcm_A TRXR, thioredoxin reduc 86.8 0.45 1.5E-05 46.9 4.1 32 112-143 147-179 (312)
313 4e12_A Diketoreductase; oxidor 86.5 0.53 1.8E-05 46.4 4.4 31 112-142 6-37 (283)
314 4a5l_A Thioredoxin reductase; 86.4 0.54 1.9E-05 46.1 4.4 33 111-143 153-186 (314)
315 3ged_A Short-chain dehydrogena 85.3 0.76 2.6E-05 44.6 4.8 30 113-142 5-36 (247)
316 1ks9_A KPA reductase;, 2-dehyd 85.3 0.8 2.7E-05 44.6 5.0 30 113-142 3-33 (291)
317 3hn2_A 2-dehydropantoate 2-red 85.2 0.67 2.3E-05 46.3 4.5 31 112-142 4-35 (312)
318 3h7a_A Short chain dehydrogena 84.9 0.78 2.7E-05 44.1 4.7 30 113-142 10-41 (252)
319 3k6j_A Protein F01G10.3, confi 84.7 0.63 2.2E-05 49.4 4.1 54 111-168 55-109 (460)
320 3fwy_A Light-independent proto 84.7 0.48 1.7E-05 47.7 3.1 31 113-143 51-87 (314)
321 3guy_A Short-chain dehydrogena 84.6 0.85 2.9E-05 42.9 4.7 30 113-142 4-35 (230)
322 3l6e_A Oxidoreductase, short-c 84.5 0.89 3E-05 43.2 4.8 30 113-142 6-37 (235)
323 3pxx_A Carveol dehydrogenase; 84.4 2.1 7E-05 41.6 7.5 33 112-144 12-46 (287)
324 2dpo_A L-gulonate 3-dehydrogen 84.3 0.76 2.6E-05 46.4 4.4 31 112-142 8-39 (319)
325 1zud_1 Adenylyltransferase THI 84.3 0.86 2.9E-05 44.2 4.6 33 111-143 29-63 (251)
326 4b79_A PA4098, probable short- 83.8 1 3.4E-05 43.6 4.8 31 113-143 14-46 (242)
327 2ew2_A 2-dehydropantoate 2-red 83.8 0.85 2.9E-05 44.9 4.5 31 112-142 5-36 (316)
328 3t7c_A Carveol dehydrogenase; 83.8 2.2 7.6E-05 42.0 7.6 31 113-143 31-63 (299)
329 4fc7_A Peroxisomal 2,4-dienoyl 83.8 1.5 5.3E-05 42.6 6.3 30 113-142 30-61 (277)
330 3tpc_A Short chain alcohol deh 83.7 1 3.4E-05 43.3 4.9 31 113-143 10-42 (257)
331 2raf_A Putative dinucleotide-b 83.7 1.1 3.8E-05 42.0 5.0 32 111-142 20-52 (209)
332 3orf_A Dihydropteridine reduct 83.6 1 3.5E-05 43.1 4.9 33 112-144 24-58 (251)
333 3f1l_A Uncharacterized oxidore 83.5 1 3.5E-05 43.2 4.8 31 112-142 14-46 (252)
334 3ghy_A Ketopantoate reductase 83.4 0.94 3.2E-05 45.6 4.7 30 112-141 5-35 (335)
335 3dii_A Short-chain dehydrogena 83.3 1 3.6E-05 43.0 4.8 30 113-142 5-36 (247)
336 3ppi_A 3-hydroxyacyl-COA dehyd 83.3 1 3.5E-05 43.8 4.8 30 113-142 33-64 (281)
337 3tzq_B Short-chain type dehydr 83.1 1.1 3.7E-05 43.5 4.8 31 113-143 14-46 (271)
338 3h8v_A Ubiquitin-like modifier 82.8 0.97 3.3E-05 45.0 4.4 33 111-143 37-71 (292)
339 1dhr_A Dihydropteridine reduct 82.8 1.1 3.8E-05 42.5 4.7 32 112-143 9-42 (241)
340 2y0c_A BCEC, UDP-glucose dehyd 82.7 0.99 3.4E-05 48.1 4.7 33 110-142 8-41 (478)
341 3rwb_A TPLDH, pyridoxal 4-dehy 82.7 1.2 4.1E-05 42.6 4.9 31 112-142 8-40 (247)
342 3vtz_A Glucose 1-dehydrogenase 82.7 0.98 3.3E-05 43.9 4.3 33 112-144 16-50 (269)
343 4h15_A Short chain alcohol deh 82.6 0.98 3.3E-05 44.1 4.3 31 113-143 14-46 (261)
344 3n74_A 3-ketoacyl-(acyl-carrie 82.5 1.2 4E-05 42.8 4.8 31 112-142 11-43 (261)
345 4eso_A Putative oxidoreductase 82.5 1.2 4E-05 42.9 4.8 30 113-142 11-42 (255)
346 3i1j_A Oxidoreductase, short c 82.4 1 3.4E-05 42.8 4.2 30 113-142 17-48 (247)
347 3e03_A Short chain dehydrogena 82.4 1.2 4.1E-05 43.3 4.9 33 112-144 8-42 (274)
348 3l77_A Short-chain alcohol deh 82.4 1.2 4.2E-05 41.9 4.8 30 113-142 5-36 (235)
349 1fjh_A 3alpha-hydroxysteroid d 82.4 1.2 4.2E-05 42.4 4.9 31 113-143 4-36 (257)
350 3gem_A Short chain dehydrogena 82.4 0.98 3.3E-05 43.7 4.2 31 112-142 29-61 (260)
351 3nyw_A Putative oxidoreductase 82.3 0.97 3.3E-05 43.4 4.1 30 113-142 10-41 (250)
352 3g17_A Similar to 2-dehydropan 82.3 0.75 2.5E-05 45.5 3.4 31 112-142 4-35 (294)
353 3sx2_A Putative 3-ketoacyl-(ac 82.2 1.2 4.1E-05 43.2 4.8 32 112-143 15-48 (278)
354 1ooe_A Dihydropteridine reduct 82.2 1.1 3.7E-05 42.4 4.3 32 113-144 6-39 (236)
355 4fgs_A Probable dehydrogenase 82.2 1.2 4.2E-05 43.8 4.8 30 113-142 32-63 (273)
356 3uve_A Carveol dehydrogenase ( 82.1 1.2 4.1E-05 43.4 4.8 31 113-143 14-46 (286)
357 4imr_A 3-oxoacyl-(acyl-carrier 82.0 1 3.4E-05 44.0 4.1 31 113-143 36-68 (275)
358 2ekp_A 2-deoxy-D-gluconate 3-d 82.0 1.3 4.5E-05 41.9 4.9 30 113-142 5-36 (239)
359 1nyt_A Shikimate 5-dehydrogena 81.9 1.3 4.4E-05 43.3 4.9 31 112-142 121-152 (271)
360 4dqx_A Probable oxidoreductase 81.9 1.2 4.2E-05 43.4 4.7 30 113-142 30-61 (277)
361 3r1i_A Short-chain type dehydr 81.8 1.2 4.2E-05 43.4 4.7 31 112-142 34-66 (276)
362 3tfo_A Putative 3-oxoacyl-(acy 81.8 1 3.6E-05 43.7 4.2 30 113-142 7-38 (264)
363 3sju_A Keto reductase; short-c 81.8 1.3 4.3E-05 43.3 4.8 30 113-142 27-58 (279)
364 3zv4_A CIS-2,3-dihydrobiphenyl 81.8 1.3 4.3E-05 43.4 4.8 30 113-142 8-39 (281)
365 2ew8_A (S)-1-phenylethanol deh 81.8 1.3 4.5E-05 42.2 4.9 30 113-142 10-41 (249)
366 3lf2_A Short chain oxidoreduct 81.7 1.3 4.4E-05 42.8 4.8 30 113-142 11-42 (265)
367 3rui_A Ubiquitin-like modifier 81.6 1.4 4.7E-05 44.9 5.1 33 111-143 35-69 (340)
368 2dkn_A 3-alpha-hydroxysteroid 81.5 1.4 4.8E-05 41.6 4.9 31 113-143 4-36 (255)
369 3qiv_A Short-chain dehydrogena 81.5 1.4 4.6E-05 42.1 4.8 31 112-142 11-43 (253)
370 3imf_A Short chain dehydrogena 81.5 1.1 3.6E-05 43.2 4.0 30 113-142 9-40 (257)
371 3s55_A Putative short-chain de 81.5 1.3 4.5E-05 43.1 4.8 32 113-144 13-46 (281)
372 3lk7_A UDP-N-acetylmuramoylala 81.5 1.1 3.7E-05 47.3 4.4 46 112-165 11-57 (451)
373 3uxy_A Short-chain dehydrogena 81.4 1.1 3.6E-05 43.6 4.0 31 113-143 31-63 (266)
374 4g65_A TRK system potassium up 81.4 0.53 1.8E-05 50.0 2.0 31 112-142 5-36 (461)
375 3tsc_A Putative oxidoreductase 81.4 1.3 4.4E-05 43.1 4.6 30 113-142 14-45 (277)
376 3ijr_A Oxidoreductase, short c 81.3 1.4 4.6E-05 43.4 4.8 31 112-142 49-81 (291)
377 3o26_A Salutaridine reductase; 81.3 1.1 3.8E-05 43.7 4.2 30 113-142 15-46 (311)
378 3v8b_A Putative dehydrogenase, 81.3 1.3 4.5E-05 43.3 4.8 30 113-142 31-62 (283)
379 1zej_A HBD-9, 3-hydroxyacyl-CO 81.3 1.2 4E-05 44.5 4.3 31 111-142 13-44 (293)
380 3ucx_A Short chain dehydrogena 81.3 1.3 4.6E-05 42.7 4.7 31 112-142 13-45 (264)
381 3svt_A Short-chain type dehydr 81.1 1.4 4.7E-05 43.0 4.8 30 113-142 14-45 (281)
382 1o5i_A 3-oxoacyl-(acyl carrier 81.1 1.4 4.9E-05 42.1 4.8 31 112-142 21-53 (249)
383 2x5o_A UDP-N-acetylmuramoylala 81.1 1 3.4E-05 47.4 4.0 33 112-144 7-40 (439)
384 3op4_A 3-oxoacyl-[acyl-carrier 81.1 1.2 4E-05 42.7 4.2 30 113-142 12-43 (248)
385 3p19_A BFPVVD8, putative blue 81.1 1.4 4.7E-05 42.8 4.7 31 112-142 18-50 (266)
386 2jah_A Clavulanic acid dehydro 81.0 1.5 5E-05 41.9 4.8 31 112-142 9-41 (247)
387 3awd_A GOX2181, putative polyo 81.0 1.4 4.9E-05 41.9 4.8 30 113-142 16-47 (260)
388 4fn4_A Short chain dehydrogena 81.0 1.4 4.9E-05 42.8 4.8 30 113-142 10-41 (254)
389 2wsb_A Galactitol dehydrogenas 81.0 1.4 5E-05 41.7 4.8 30 113-142 14-45 (254)
390 4e6p_A Probable sorbitol dehyd 80.9 1.4 4.9E-05 42.2 4.8 30 113-142 11-42 (259)
391 1lld_A L-lactate dehydrogenase 80.8 1.4 4.9E-05 43.7 4.9 32 111-142 8-42 (319)
392 3sc4_A Short chain dehydrogena 80.7 1.4 4.9E-05 43.0 4.8 33 112-144 11-45 (285)
393 2dtx_A Glucose 1-dehydrogenase 80.7 1.5 5.2E-05 42.4 4.9 32 113-144 11-44 (264)
394 3pgx_A Carveol dehydrogenase; 80.7 1.4 4.7E-05 42.9 4.6 31 113-143 18-50 (280)
395 1uay_A Type II 3-hydroxyacyl-C 80.7 1.2 4.3E-05 41.7 4.2 31 113-143 5-37 (242)
396 3uf0_A Short-chain dehydrogena 80.6 1.5 5.1E-05 42.7 4.8 30 112-141 33-64 (273)
397 3rkr_A Short chain oxidoreduct 80.6 1.2 4.3E-05 42.8 4.2 31 112-142 31-63 (262)
398 2fwm_X 2,3-dihydro-2,3-dihydro 80.6 1.6 5.4E-05 41.7 4.9 32 112-143 9-42 (250)
399 2cfc_A 2-(R)-hydroxypropyl-COM 80.6 1.5 5.2E-05 41.4 4.8 30 113-142 5-36 (250)
400 2d1y_A Hypothetical protein TT 80.5 1.6 5.3E-05 41.9 4.9 31 113-143 9-41 (256)
401 1xdi_A RV3303C-LPDA; reductase 80.5 1.9 6.4E-05 45.9 5.9 33 111-143 183-216 (499)
402 3e8x_A Putative NAD-dependent 80.5 1.5 5.1E-05 41.2 4.7 31 112-142 23-55 (236)
403 1mv8_A GMD, GDP-mannose 6-dehy 80.5 1.1 3.8E-05 47.0 4.0 30 113-142 3-33 (436)
404 3pk0_A Short-chain dehydrogena 80.5 1.2 4.1E-05 43.0 4.1 30 113-142 13-44 (262)
405 4a7p_A UDP-glucose dehydrogena 80.5 1.6 5.6E-05 46.1 5.3 34 110-143 8-42 (446)
406 4fs3_A Enoyl-[acyl-carrier-pro 80.4 1.4 4.7E-05 42.6 4.4 30 113-142 9-42 (256)
407 3rd5_A Mypaa.01249.C; ssgcid, 80.4 1.5 5.1E-05 42.9 4.8 31 112-142 18-50 (291)
408 3rih_A Short chain dehydrogena 80.4 1.1 3.9E-05 44.2 3.9 30 113-142 44-75 (293)
409 2o23_A HADH2 protein; HSD17B10 80.4 1.6 5.4E-05 41.7 4.9 31 112-142 14-46 (265)
410 3ew7_A LMO0794 protein; Q8Y8U8 80.4 1.7 5.8E-05 40.0 4.9 30 113-142 3-34 (221)
411 3oj0_A Glutr, glutamyl-tRNA re 80.4 0.64 2.2E-05 40.6 1.8 31 112-142 23-54 (144)
412 3pef_A 6-phosphogluconate dehy 80.4 1.5 5.2E-05 42.9 4.8 32 112-143 3-35 (287)
413 3tox_A Short chain dehydrogena 80.3 1.2 4E-05 43.7 3.9 30 113-142 11-42 (280)
414 4gkb_A 3-oxoacyl-[acyl-carrier 80.3 1.6 5.6E-05 42.4 5.0 31 113-143 10-42 (258)
415 3f9i_A 3-oxoacyl-[acyl-carrier 80.3 1.2 4.3E-05 42.2 4.1 31 112-142 16-48 (249)
416 1zcj_A Peroxisomal bifunctiona 80.3 1.2 4.1E-05 47.2 4.3 31 112-142 39-70 (463)
417 3gvc_A Oxidoreductase, probabl 80.2 1.2 4E-05 43.7 3.9 30 113-142 32-63 (277)
418 3ftp_A 3-oxoacyl-[acyl-carrier 80.2 1.2 4.2E-05 43.3 4.0 30 113-142 31-62 (270)
419 4g81_D Putative hexonate dehyd 80.2 1.1 3.9E-05 43.5 3.8 30 113-142 12-43 (255)
420 3oec_A Carveol dehydrogenase ( 80.1 3 0.0001 41.5 7.0 30 113-142 49-80 (317)
421 2vdc_G Glutamate synthase [NAD 80.1 2.9 0.0001 44.0 7.2 33 111-143 265-299 (456)
422 3v2h_A D-beta-hydroxybutyrate 80.1 1.5 5.3E-05 42.8 4.7 30 112-141 27-58 (281)
423 1vl8_A Gluconate 5-dehydrogena 80.1 1.6 5.4E-05 42.3 4.8 30 113-142 24-55 (267)
424 1cyd_A Carbonyl reductase; sho 80.1 1.6 5.6E-05 41.0 4.8 31 112-142 9-41 (244)
425 1iy8_A Levodione reductase; ox 80.0 1.6 5.5E-05 42.1 4.8 30 113-142 16-47 (267)
426 4dyv_A Short-chain dehydrogena 80.0 1.3 4.3E-05 43.3 4.0 30 113-142 31-62 (272)
427 1uls_A Putative 3-oxoacyl-acyl 80.0 1.6 5.6E-05 41.5 4.8 30 113-142 8-39 (245)
428 3ak4_A NADH-dependent quinucli 80.0 1.6 5.5E-05 41.9 4.8 30 113-142 15-46 (263)
429 1bg6_A N-(1-D-carboxylethyl)-L 80.0 1.6 5.5E-05 43.9 4.9 31 112-142 6-37 (359)
430 2z1n_A Dehydrogenase; reductas 79.9 1.6 5.6E-05 41.8 4.8 30 113-142 10-41 (260)
431 3un1_A Probable oxidoreductase 79.9 1.5 5.2E-05 42.3 4.5 32 113-144 31-64 (260)
432 1w4x_A Phenylacetone monooxyge 79.9 7.2 0.00025 41.8 10.4 32 112-143 188-220 (542)
433 3gg2_A Sugar dehydrogenase, UD 79.8 1.3 4.6E-05 46.7 4.5 31 112-142 4-35 (450)
434 4dry_A 3-oxoacyl-[acyl-carrier 79.8 1.3 4.4E-05 43.4 4.0 31 112-142 35-67 (281)
435 3ai3_A NADPH-sorbose reductase 79.8 1.7 5.7E-05 41.8 4.8 30 113-142 10-41 (263)
436 2pd6_A Estradiol 17-beta-dehyd 79.7 1.6 5.6E-05 41.6 4.7 30 113-142 10-41 (264)
437 3ond_A Adenosylhomocysteinase; 79.7 1.4 4.7E-05 47.0 4.5 31 112-142 267-298 (488)
438 3dtt_A NADP oxidoreductase; st 79.6 1.5 5E-05 42.1 4.3 33 111-143 20-53 (245)
439 3t4x_A Oxidoreductase, short c 79.6 1.3 4.5E-05 42.8 4.0 30 113-142 13-44 (267)
440 1hdc_A 3-alpha, 20 beta-hydrox 79.6 1.7 5.8E-05 41.6 4.8 30 113-142 8-39 (254)
441 3dfz_A SIRC, precorrin-2 dehyd 79.6 1.3 4.4E-05 42.3 3.8 31 111-141 32-63 (223)
442 1zem_A Xylitol dehydrogenase; 79.5 1.7 5.8E-05 41.8 4.8 30 113-142 10-41 (262)
443 2nm0_A Probable 3-oxacyl-(acyl 79.5 1.8 6E-05 41.7 4.9 31 113-143 24-56 (253)
444 4egf_A L-xylulose reductase; s 79.5 1.3 4.6E-05 42.7 4.0 30 113-142 23-54 (266)
445 2ehd_A Oxidoreductase, oxidore 79.5 1.5 5E-05 41.2 4.2 30 113-142 8-39 (234)
446 2zat_A Dehydrogenase/reductase 79.5 1.4 4.9E-05 42.2 4.2 30 113-142 17-48 (260)
447 2ae2_A Protein (tropinone redu 79.5 1.7 5.9E-05 41.6 4.8 30 113-142 12-43 (260)
448 3doj_A AT3G25530, dehydrogenas 79.5 1.7 5.7E-05 43.3 4.8 32 111-142 22-54 (310)
449 3gaf_A 7-alpha-hydroxysteroid 79.5 1.2 4.1E-05 42.9 3.6 31 112-142 14-46 (256)
450 1ae1_A Tropinone reductase-I; 79.4 1.7 5.9E-05 42.1 4.8 30 113-142 24-55 (273)
451 1x1t_A D(-)-3-hydroxybutyrate 79.4 1.5 5E-05 42.2 4.2 30 113-142 7-38 (260)
452 3l9w_A Glutathione-regulated p 79.3 1.3 4.6E-05 46.2 4.2 32 112-143 6-38 (413)
453 1kyq_A Met8P, siroheme biosynt 79.3 0.98 3.3E-05 44.6 3.0 32 111-142 14-46 (274)
454 3d3w_A L-xylulose reductase; u 79.3 1.8 6.2E-05 40.8 4.8 31 112-142 9-41 (244)
455 1nff_A Putative oxidoreductase 79.3 1.8 6E-05 41.7 4.8 30 113-142 10-41 (260)
456 1uzm_A 3-oxoacyl-[acyl-carrier 79.3 1.4 5E-05 41.9 4.2 31 113-143 18-50 (247)
457 2b4q_A Rhamnolipids biosynthes 79.2 1.8 6.2E-05 42.1 4.9 30 113-142 32-63 (276)
458 1yde_A Retinal dehydrogenase/r 79.2 1.7 6E-05 42.1 4.8 31 112-142 11-43 (270)
459 2rhc_B Actinorhodin polyketide 79.2 1.7 6E-05 42.2 4.8 31 112-142 24-56 (277)
460 4iin_A 3-ketoacyl-acyl carrier 79.2 1.4 4.9E-05 42.6 4.1 30 113-142 32-63 (271)
461 2gdz_A NAD+-dependent 15-hydro 79.1 1.8 6.1E-05 41.7 4.8 30 113-142 10-41 (267)
462 3g0o_A 3-hydroxyisobutyrate de 79.1 1.6 5.4E-05 43.3 4.5 32 111-142 8-40 (303)
463 2bgk_A Rhizome secoisolaricire 79.0 1.8 6.2E-05 41.6 4.8 30 113-142 19-50 (278)
464 1z82_A Glycerol-3-phosphate de 79.0 1.8 6E-05 43.5 4.9 32 111-142 15-47 (335)
465 1h5q_A NADP-dependent mannitol 79.0 1.6 5.4E-05 41.7 4.3 31 112-142 16-48 (265)
466 4hp8_A 2-deoxy-D-gluconate 3-d 78.9 1.5 5.2E-05 42.5 4.1 30 113-142 12-43 (247)
467 2ag5_A DHRS6, dehydrogenase/re 78.8 1.6 5.3E-05 41.6 4.2 30 113-142 9-40 (246)
468 3tjr_A Short chain dehydrogena 78.8 1.8 6.1E-05 42.8 4.8 31 112-142 33-65 (301)
469 1geg_A Acetoin reductase; SDR 78.8 1.9 6.4E-05 41.3 4.8 30 113-142 5-36 (256)
470 2q2v_A Beta-D-hydroxybutyrate 78.7 1.7 5.7E-05 41.6 4.4 30 113-142 7-38 (255)
471 3ego_A Probable 2-dehydropanto 78.7 1.8 6.1E-05 43.1 4.8 30 112-142 4-34 (307)
472 2a4k_A 3-oxoacyl-[acyl carrier 78.7 1.9 6.4E-05 41.7 4.8 30 113-142 9-40 (263)
473 2qq5_A DHRS1, dehydrogenase/re 78.6 1.6 5.4E-05 41.9 4.2 30 113-142 8-39 (260)
474 4ibo_A Gluconate dehydrogenase 78.6 1.4 4.6E-05 43.0 3.8 30 113-142 29-60 (271)
475 1sby_A Alcohol dehydrogenase; 78.6 1.9 6.4E-05 41.1 4.7 30 113-142 8-40 (254)
476 3qlj_A Short chain dehydrogena 78.6 1.5 5.1E-05 43.7 4.2 30 113-142 30-61 (322)
477 3grp_A 3-oxoacyl-(acyl carrier 78.5 1.6 5.4E-05 42.3 4.2 31 112-142 29-61 (266)
478 3v2g_A 3-oxoacyl-[acyl-carrier 78.5 1.9 6.6E-05 41.9 4.8 30 113-142 34-65 (271)
479 1xg5_A ARPG836; short chain de 78.4 1.9 6.6E-05 41.7 4.8 31 112-142 34-66 (279)
480 3lyl_A 3-oxoacyl-(acyl-carrier 78.3 1.6 5.6E-05 41.3 4.2 30 113-142 8-39 (247)
481 3kvo_A Hydroxysteroid dehydrog 78.3 2 6.7E-05 43.7 5.0 33 112-144 47-81 (346)
482 3tl3_A Short-chain type dehydr 78.3 1.5 5.1E-05 42.0 3.9 29 113-141 12-42 (257)
483 1yb1_A 17-beta-hydroxysteroid 78.3 1.9 6.7E-05 41.6 4.8 31 112-142 33-65 (272)
484 3r3s_A Oxidoreductase; structu 78.2 1.8 6.1E-05 42.6 4.6 30 112-141 51-82 (294)
485 1w6u_A 2,4-dienoyl-COA reducta 78.2 1.9 6.6E-05 42.1 4.8 31 112-142 28-60 (302)
486 1yxm_A Pecra, peroxisomal tran 78.1 1.9 6.7E-05 42.2 4.8 30 113-142 21-52 (303)
487 1fmc_A 7 alpha-hydroxysteroid 78.0 1.5 5.3E-05 41.5 3.9 30 113-142 14-45 (255)
488 1vg0_A RAB proteins geranylger 78.0 5.1 0.00017 44.3 8.5 37 109-145 7-44 (650)
489 4da9_A Short-chain dehydrogena 78.0 2.1 7.1E-05 41.8 4.9 29 113-141 32-62 (280)
490 1hxh_A 3BETA/17BETA-hydroxyste 77.9 1.7 5.8E-05 41.5 4.2 30 113-142 9-40 (253)
491 3h5n_A MCCB protein; ubiquitin 77.8 1.6 5.6E-05 44.5 4.2 33 111-143 119-153 (353)
492 3o0h_A Glutathione reductase; 77.6 2.3 8E-05 44.9 5.6 33 111-143 192-225 (484)
493 3uce_A Dehydrogenase; rossmann 77.6 1.1 3.9E-05 41.9 2.8 31 113-143 9-41 (223)
494 1txg_A Glycerol-3-phosphate de 77.5 1.6 5.6E-05 43.4 4.1 28 113-140 3-31 (335)
495 3hwr_A 2-dehydropantoate 2-red 77.5 2.1 7.1E-05 42.8 4.8 30 111-141 20-50 (318)
496 3afn_B Carbonyl reductase; alp 77.5 1.7 5.8E-05 41.2 4.0 29 113-141 10-40 (258)
497 3mog_A Probable 3-hydroxybutyr 77.5 1.7 5.8E-05 46.4 4.4 31 112-142 7-38 (483)
498 1y8q_A Ubiquitin-like 1 activa 77.4 1.8 6.1E-05 44.1 4.4 33 111-143 37-71 (346)
499 3a28_C L-2.3-butanediol dehydr 77.4 1.5 5.2E-05 42.0 3.7 30 113-142 5-36 (258)
500 3h2s_A Putative NADH-flavin re 77.3 2.3 7.7E-05 39.3 4.8 30 113-142 3-34 (224)
No 1
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=1.8e-32 Score=285.70 Aligned_cols=309 Identities=16% Similarity=0.180 Sum_probs=203.3
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCCc-c-cccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGRE-Q-EWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~~-r-~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
+|||||||| ++|+++|+.||++|++|+|+||++.++.+ + ...|++.. |.++|+....+. +.......++..
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~---l~~l~~~~~~~~---~~~~~~~~~~~~ 77 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGI---LNEADIKADRSF---IANEVKGARIYG 77 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHH---HHHTTCCCCTTT---EEEEESEEEEEC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHH---HHHcCCCchhhh---hhcccceEEEEe
Confidence 599999995 57999999999999999999998866543 2 34576654 566777543211 111111111111
Q ss_pred cCC-ccc-----cccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEE--cCC--cEEEcCEEEEe
Q 009027 187 EGK-GEI-----WVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEG--KILSSHLIIDA 256 (546)
Q Consensus 187 ~~~-~~l-----~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~--~~g--~~i~ArlVV~A 256 (546)
... ..+ ......++.+++..|++.|.+++.+.|++++.+++++++..+++.++... .++ .+++|++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgA 157 (397)
T 3oz2_A 78 PSEKRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAA 157 (397)
T ss_dssp TTCSSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCCceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeC
Confidence 110 000 11123457899999999999999999999999999999999888765332 233 37999999999
Q ss_pred cCCChHHHHHhcCCCC---CCeeeeEEEEEeeccC-CCceeeeeccCCcccccCCCCcceEEEEecCCCCCccceEEEEE
Q 009027 257 MGNFSPVVKQIRSGRK---PDGVCLVVGSCARGFK-DNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFT 332 (546)
Q Consensus 257 DG~~S~vr~ql~~~~~---~~~~~~~vg~~~~~~~-~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~l~~ 332 (546)
||.+|.++++++.... +..............+ +.+..+++.. ... ..+++| .||.+++. ...++..
T Consensus 158 dG~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-----~~g~~~-~~~~~~~~--~~vg~~~ 227 (397)
T 3oz2_A 158 DGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLG--SIA-----PAGYIW-VFPKGEGM--ANVGIGS 227 (397)
T ss_dssp CCTTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECS--TTS-----TTEEEE-EEEEETTE--EEEEEEE
T ss_pred CccccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeee--ccC-----CCceEE-Eeecccce--eEEEEee
Confidence 9999999999976532 2222211111111111 2223333322 222 257888 68877541 2233333
Q ss_pred ccCCCCCCccHHHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCcchhhH
Q 009027 333 YIDPQAGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLT 412 (546)
Q Consensus 333 ~~~~~~~~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Plsg~G~g~~l 412 (546)
..+......++.+.++++.+..|.+... .......+.+|... ...++..+|++|+|||||.++|++|+|++.++
T Consensus 228 ~~~~~~~~~~~~~~l~~~~~~~~~l~~~-----~~~~~~~~~~~~~~-~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~ 301 (397)
T 3oz2_A 228 SINWIHNRFELKNYLDRFIENHPGLKKG-----QDIQLVTGGVSVSK-VKMPITMPGLMLVGDAARLIDPITGGGIANAI 301 (397)
T ss_dssp ETTTSCSHHHHHHHHHHHHHTCHHHHTS-----EEEEEEEEEEECCC-CCSCCEETTEEECGGGGTCSCTTTCCCHHHHH
T ss_pred ccchhhhhhhHHHHHHHHHHhCcccccc-----ceeeeeeccccccC-cccceeeeeEEEcccccccCCCCcchhHHHHH
Confidence 3222222336778888888877765442 22233334566543 23467789999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 413 RHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 413 rd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
.|+..||+.|.++++.++.+.. .|+.|+
T Consensus 302 ~~g~~~A~~i~~~l~~~~~~~~---~L~~Ye 329 (397)
T 3oz2_A 302 VSGMYAAQVTKEAIESNDYSPQ---MMQKYE 329 (397)
T ss_dssp HHHHHHHHHHHHHHHHTCCSHH---HHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCccHH---HHHHHH
Confidence 9999999999999998876554 457898
No 2
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.97 E-value=2.5e-29 Score=263.46 Aligned_cols=305 Identities=16% Similarity=0.196 Sum_probs=202.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCC-cc-cccCCHHHHHHHHHcCCCCcccchhhhhhcc------C
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQ-EWNISRKELLELVESGILVEDDIDEATATKF------N 180 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r-~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~------~ 180 (546)
+||||||||| +|+++|+.|+++|++|+|+||.+.++. .. ...++. +.++.+|++...+. ....+ .
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~---~~~~~lg~~~~~~~---~~~~~~~~~~~~ 77 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSK---GILNEADIKADRSF---IANEVKGARIYG 77 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEET---HHHHHTTCCCCTTT---EEEEESEEEEEC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCH---HHHHHcCCCCChHH---hhhhcceEEEEc
Confidence 5999999965 699999999999999999999986553 22 233443 35778898754211 11111 0
Q ss_pred C--Cc-ccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEE-EEEc---CCcEEEcCEE
Q 009027 181 P--NR-CGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA---EGKILSSHLI 253 (546)
Q Consensus 181 ~--~~-v~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~---~g~~i~ArlV 253 (546)
+ .. +.+... .. ....++.+++..|.+.|.+++.+.|++++.+++|+++..+++.++ |.+. ++.+++|++|
T Consensus 78 ~~~~~~~~~~~~-~~--~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~v 154 (397)
T 3cgv_A 78 PSEKRPIILQSE-KA--GNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMV 154 (397)
T ss_dssp TTCSSCEEEC--------CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCCEEEEEecc-cc--CCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEE
Confidence 0 01 111110 00 123467899999999999999999999999999999999988876 7663 3458999999
Q ss_pred EEecCCChHHHHHhcCCC-C--CCeeeeEEEEEeeccC-CCceeeeeccCCcccccCCCCcceEEEEecCCCCCccceEE
Q 009027 254 IDAMGNFSPVVKQIRSGR-K--PDGVCLVVGSCARGFK-DNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTY 329 (546)
Q Consensus 254 V~ADG~~S~vr~ql~~~~-~--~~~~~~~vg~~~~~~~-~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~ 329 (546)
|+|||.+|.++++++... . +......+.......+ +....++++.. .. ..+++| .+|..++ ....
T Consensus 155 V~A~G~~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~g~~~-~~P~~~~---~~~v 223 (397)
T 3cgv_A 155 IAADGFESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGS--IA-----PAGYIW-VFPKGEG---MANV 223 (397)
T ss_dssp EECCCTTCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEECST--TS-----TTEEEE-EEEEETT---EEEE
T ss_pred EECCCcchHhHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEEeCC--cC-----CCceEE-EEECCCC---eEEE
Confidence 999999999999998665 2 2222221111111111 12223333221 11 257888 7898765 3232
Q ss_pred EEEccCCCC-CCccHHHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCcc
Q 009027 330 MFTYIDPQA-GSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGF 408 (546)
Q Consensus 330 l~~~~~~~~-~~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Plsg~G~ 408 (546)
.+.+..... ...+..+.+++|....|.+... ++.....+.+|.... ..++..+|++++|||||.++|++|+|+
T Consensus 224 g~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~~p~~~~-~~~~~~~~v~liGDAa~~~~P~~G~G~ 297 (397)
T 3cgv_A 224 GIGSSINWIHNRFELKNYLDRFIENHPGLKKG-----QDIQLVTGGVSVSKV-KMPITMPGLMLVGDAARLIDPITGGGI 297 (397)
T ss_dssp EEEEETTTCSCHHHHHHHHHHHHHTCHHHHTS-----EEEEEEEEEEECCCC-CSCCEETTEEECGGGGTCSCTTTCCCH
T ss_pred EEEeccccccCCCCHHHHHHHHHHhCcCCCCC-----eEEeeeeeeeecCCC-ccceeeCCEEEEEccccCCCCCCCCCH
Confidence 233222111 1136677888888877654322 223344567787532 446678999999999999999999999
Q ss_pred hhhHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 409 GSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 409 g~~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
+.+++|+..|++.|.+++..+..+. ..|+.|+
T Consensus 298 ~~a~~~a~~la~~l~~~~~~~~~~~---~~l~~Y~ 329 (397)
T 3cgv_A 298 ANAIVSGMYAAQVTKEAIESNDYSP---QMMQKYE 329 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCSH---HHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCccH---HHHHHHH
Confidence 9999999999999999997765443 3456777
No 3
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.97 E-value=6.8e-30 Score=282.74 Aligned_cols=311 Identities=18% Similarity=0.114 Sum_probs=197.4
Q ss_pred CcccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCC-CcccccCCHHHHHHHHHcCCCCcccchhhhhh-c-cCCCc-
Q 009027 109 GTFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKG-REQEWNISRKELLELVESGILVEDDIDEATAT-K-FNPNR- 183 (546)
Q Consensus 109 ~~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~-~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~-~-~~~~~- 183 (546)
.+|||||||| ++|+++|+.|+++|++|+||||.+.+. ..+...+++.+++.|+++|+++...-...... . +....
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFT 127 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCccc
Confidence 3699999996 569999999999999999999998765 34567899999999999999753210000000 0 11000
Q ss_pred ccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEE--cCC-cEEEcCEEEEecCCC
Q 009027 184 CGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEG-KILSSHLIIDAMGNF 260 (546)
Q Consensus 184 v~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~--~~g-~~i~ArlVV~ADG~~ 260 (546)
..+.. ..+..+....+.+++..|.+.|.+++.+.|++|+.+++|+++..++++++|++ .+| ++++|++||+|||.+
T Consensus 128 ~~~~~-~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 128 QGLDF-GLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp TCCBG-GGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred ccccc-cccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 01110 11111223456799999999999999999999999999999999999999988 567 689999999999999
Q ss_pred hHHHHHhcCCCC---CCeeeeEEEEEeeccCCCceeeeeccCCcccccCCCCcceEEEEecCCCCCccc-eEEEEEccCC
Q 009027 261 SPVVKQIRSGRK---PDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDR-TTYMFTYIDP 336 (546)
Q Consensus 261 S~vr~ql~~~~~---~~~~~~~vg~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~-~~~l~~~~~~ 336 (546)
|.+|+++++..+ +...+.+.. + ..+.... .. .. .. ...+++|..+|..++. . ..++......
T Consensus 207 S~vR~~lGi~~~~~~~~~~~~~~~-v--~~~~~~~-~~--~~-~~-----~~~G~~~~~~P~~~g~--~~~i~~~~~~~~ 272 (570)
T 3fmw_A 207 STVRRLAADRFPGTEATVRALIGY-V--TTPEREV-PR--RW-ER-----TPDGILVLAFPPEGGL--GPGWSSSSTGHS 272 (570)
T ss_dssp CHHHHHTTCCCCCCCCCEEEEEEE-C--CCCSCSS-CC--CC-CC-----CCSSCEEECCCC--------CEEEEEESCC
T ss_pred chHHHHcCCCCccceeeeEEEEEE-E--EecCCCc-ce--EE-Ee-----cCCEEEEEEeecCCCe--EEEEEEEeCCCC
Confidence 999999987543 222222111 0 1111110 00 00 00 1235666337877651 1 1222222111
Q ss_pred CC---CCccHHHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCcchhhHh
Q 009027 337 QA---GSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTR 413 (546)
Q Consensus 337 ~~---~~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Plsg~G~g~~lr 413 (546)
.. ...+.+++.+.+.+.++.. +...+... ....||.......++..+||+|+|||||.++|++|||+|++++
T Consensus 273 ~~~~~~~~~~~~~~~~l~~~~~~~----~~~~~~~~-~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~ 347 (570)
T 3fmw_A 273 PAADEGPVTLEDLGAAVARVRGTP----LTLTEPVS-WLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQ 347 (570)
T ss_dssp -----CCCCHHHHHHHTTSSSSCC----CCCCSCCE-EEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHH
T ss_pred ccccccCCCHHHHHHHHHHHhhcc----cccceeee-eeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHHH
Confidence 11 1235555555443333321 11111110 1234566554456788899999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 414 HLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 414 d~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
|+..|++.|..+++... ....|+.|+
T Consensus 348 DA~~La~~La~~~~g~~----~~~lL~~Ye 373 (570)
T 3fmw_A 348 DAVNLGWKLAARVRGWG----SEELLDTYH 373 (570)
T ss_dssp HHHHHHHHHHHHHHSCC----CHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCC----cHHHHHHHH
Confidence 99999999999886421 245678999
No 4
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.97 E-value=9.5e-29 Score=269.52 Aligned_cols=303 Identities=17% Similarity=0.163 Sum_probs=196.8
Q ss_pred CcccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCC-cccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 109 GTFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 109 ~~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
.++||+|||| ++|+++|+.|+++|++|+||||.+.+.. .+...+++++++.|+++|++++ +... ... ....|
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~--~~~~--~~~--~~~~~ 83 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPR--FGEV--ETS--TQGHF 83 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGG--GCSC--CBC--CEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHH--HHhc--ccc--ccccc
Confidence 4799999995 5799999999999999999999887653 4567899999999999999764 2111 001 00111
Q ss_pred cCC----ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCc---EEEcCEEEEecCC
Q 009027 187 EGK----GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK---ILSSHLIIDAMGN 259 (546)
Q Consensus 187 ~~~----~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~---~i~ArlVV~ADG~ 259 (546)
.+. ..+..+....+.+++..|++.|.+++.+.|++++.+++|+++.+++++++|++.++. +++|++||+|||.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~ 163 (500)
T 2qa1_A 84 GGLPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGG 163 (500)
T ss_dssp TTEEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCT
T ss_pred cceecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCc
Confidence 110 011111223467899999999999999999999999999999999999999887664 8999999999999
Q ss_pred ChHHHHHhcCCCC---CCeeeeEEEEEeeccCCCceeeeeccCCcccccCCCCcceEEEEecCCCCCccceEEEEEc-cC
Q 009027 260 FSPVVKQIRSGRK---PDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTY-ID 335 (546)
Q Consensus 260 ~S~vr~ql~~~~~---~~~~~~~vg~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~l~~~-~~ 335 (546)
+|.||+++++..+ +...+... .+ . .++.. ..+... .. ..+++| ++|.+++ ...+.+.. ..
T Consensus 164 ~S~VR~~lg~~~~~~~~~~~~~~~-~~-~-~~~~~-~~~~~~---~~-----~~g~~~-~~p~~~g---~~~~~~~~~~~ 227 (500)
T 2qa1_A 164 RSSVRKAAGFDFPGTAATMEMYLA-DI-K-GVELQ-PRMIGE---TL-----PGGMVM-VGPLPGG---ITRIIVCERGT 227 (500)
T ss_dssp TCHHHHHTTCCCCEECCCCEEEEE-EE-E-SCCCC-CEEEEE---EE-----TTEEEE-EEEETTT---EEEEEEEETTC
T ss_pred chHHHHHcCCCcCCCccceEEEEE-EE-E-eCCCC-CceEEE---EC-----CCcEEE-EEEcCCC---EEEEEEEcCCC
Confidence 9999999976542 22222211 11 0 11100 011110 11 135566 6787655 23332222 21
Q ss_pred CCC---CCccHHHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCcchhhH
Q 009027 336 PQA---GSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLT 412 (546)
Q Consensus 336 ~~~---~~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Plsg~G~g~~l 412 (546)
... ...+.+++.+.+.+.++. .....+..+. ..++.......++..+||+|+|||||.++|++|||+|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~----~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi 301 (500)
T 2qa1_A 228 PPQRRETPPSWHEVADAWKRLTGD--DIAHAEPVWV----SAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSI 301 (500)
T ss_dssp CC-----CCCHHHHHHHHHHHHSC--CCTTSEEEEE----EEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHH
T ss_pred CCccccCCCCHHHHHHHHHHhcCC--CCCccceeEE----EEeccCcEEccccccCCEEEEEccccCCCCccccchhhhH
Confidence 111 112445444443333221 1111111111 2334433334567789999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 413 RHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 413 rd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
+|+..|+..|..+++. . + ....|..|+
T Consensus 302 ~DA~~La~~La~~~~g-~-~--~~~~L~~Y~ 328 (500)
T 2qa1_A 302 QDAVNLGWKLGAVVNG-T-A--TEELLDSYH 328 (500)
T ss_dssp HHHHHHHHHHHHHHTT-S-S--CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcC-C-C--ChHHHHHHH
Confidence 9999999999988853 2 1 234678999
No 5
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.97 E-value=7.6e-29 Score=270.23 Aligned_cols=303 Identities=16% Similarity=0.206 Sum_probs=198.4
Q ss_pred CcccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCC-cccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 109 GTFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 109 ~~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
.++||+|||| ++|+++|+.|+++|++|+||||.+.+.. .+...+++++++.|+++|+++.. ... .... ...|
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~--~~~--~~~~--~~~~ 84 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAF--GPV--ETST--QGHF 84 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGG--CSC--CEES--EEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHH--Hhc--cccc--ccee
Confidence 3799999995 5799999999999999999999887653 45678999999999999997542 111 0000 0111
Q ss_pred cCC----ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCc---EEEcCEEEEecCC
Q 009027 187 EGK----GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK---ILSSHLIIDAMGN 259 (546)
Q Consensus 187 ~~~----~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~---~i~ArlVV~ADG~ 259 (546)
.+. ..+..+....+.+++..|++.|.+++.+.|++|+.+++|+++.+++++++|++.++. +++|++||+|||.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~ 164 (499)
T 2qa2_A 85 GGRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGG 164 (499)
T ss_dssp TTEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCT
T ss_pred cceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCc
Confidence 110 011111223467899999999999999999999999999999999999999987764 8999999999999
Q ss_pred ChHHHHHhcCCCC---CCeeeeEEEEEeeccCCCceeeeeccCCcccccCCCCcceEEEEecCCCCCccceEEEEEc-cC
Q 009027 260 FSPVVKQIRSGRK---PDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTY-ID 335 (546)
Q Consensus 260 ~S~vr~ql~~~~~---~~~~~~~vg~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~l~~~-~~ 335 (546)
+|.||+++++..+ +...+... .+ . .++.. ..+... .. ..+++| .+|.+++ ...+.+.. ..
T Consensus 165 ~S~VR~~lg~~~~~~~~~~~~~~~-~v-~-~~~~~-~~~~~~---~~-----~~g~~~-~~P~~~g---~~~~~~~~~~~ 228 (499)
T 2qa2_A 165 RSTVRKAAGFDFPGTSASREMFLA-DI-R-GCEIT-PRPIGE---TV-----PLGMVM-SAPLGDG---VDRIIVCERGA 228 (499)
T ss_dssp TCHHHHHTTCCCCEECCCCCEEEE-EE-E-SCCCC-CEEEEE---EE-----TTEEEE-EEECSSS---CEEEEEEETTC
T ss_pred ccHHHHHcCCCCCCCCCccEEEEE-EE-E-ECCCC-cceEEE---EC-----CCeEEE-EEEcCCC---EEEEEEEecCC
Confidence 9999999976532 22222211 11 1 11100 111111 11 135566 6887765 23333222 21
Q ss_pred CCC---CCccHHHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCcchhhH
Q 009027 336 PQA---GSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLT 412 (546)
Q Consensus 336 ~~~---~~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Plsg~G~g~~l 412 (546)
... ...+.+++.+.+.+.++. .....+..+. ..++.......++..+||+|+|||||.++|++|||+|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~----~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi 302 (499)
T 2qa2_A 229 PARRRTGPPPYQEVAAAWQRLTGQ--DISHGEPVWV----SAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSV 302 (499)
T ss_dssp CCCCCSSSCCHHHHHHHHHHHHSC--CCTTCEEEEE----EEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHH
T ss_pred CCccccCCCCHHHHHHHHHHHhCC--CCCccceeEE----EEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhH
Confidence 111 112445554444333321 1111111111 2344433334567789999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 413 RHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 413 rd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
+|+..|+..|..+++.. + ....|+.|+
T Consensus 303 ~DA~~La~~La~~l~g~--~--~~~~L~~Ye 329 (499)
T 2qa2_A 303 QDSVNLGWKLAAVVSGR--A--PAGLLDTYH 329 (499)
T ss_dssp HHHHHHHHHHHHHHTTS--S--CTHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCC--C--ChHHHHHHH
Confidence 99999999999888532 1 234578999
No 6
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.96 E-value=2e-28 Score=259.02 Aligned_cols=304 Identities=16% Similarity=0.112 Sum_probs=188.8
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCC-cccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
.+|||+||||| +|+++|+.|+++|++|+|+||.+.++. .+...+++..++.|+++|+++. +.. .......+.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~--~~~---~~~~~~~~~~ 96 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDI--MET---FGGPLRRMAY 96 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHH--HHH---HSCCCCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHH--HHh---hcCCCcceEE
Confidence 36999999965 699999999999999999999987653 3457899999999999998753 211 1111111111
Q ss_pred cC---Ccc---cccc------ccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEE
Q 009027 187 EG---KGE---IWVE------DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLII 254 (546)
Q Consensus 187 ~~---~~~---l~~~------~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV 254 (546)
.. +.. +... ....+.+++..|++.|.+++.+ ++|+.+++|+++..++++++|++++|++++|++||
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~vV 174 (407)
T 3rp8_A 97 RDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLLI 174 (407)
T ss_dssp EETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEEE
T ss_pred EECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEEE
Confidence 11 010 0000 1235679999999999999976 89999999999999999999999999999999999
Q ss_pred EecCCChHHHHHh-cCCCCCCe--eeeEEEEEee--ccCCCceeeeeccCCcccccCCCCcceEEEEecCCCCCccceEE
Q 009027 255 DAMGNFSPVVKQI-RSGRKPDG--VCLVVGSCAR--GFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTY 329 (546)
Q Consensus 255 ~ADG~~S~vr~ql-~~~~~~~~--~~~~vg~~~~--~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~ 329 (546)
+|||.+|.+|+++ +....+.. .....+.... ..+.......+.. ..+++| .+|..++ ....
T Consensus 175 ~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~p~~~~---~~~~ 240 (407)
T 3rp8_A 175 AADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVG----------EGKQVS-LMPVSAG---RFYF 240 (407)
T ss_dssp ECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEE----------TTEEEE-EEEETTT---EEEE
T ss_pred ECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEEC----------CCcEEE-EEEcCCC---eEEE
Confidence 9999999999998 54322211 1111111100 0001111111110 135566 6887765 2333
Q ss_pred EEEccCCCC---CCccHHHHHHHHH-HhCccccccccCcceE-eeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCC
Q 009027 330 MFTYIDPQA---GSPKLEELLERYW-DLMPEYQGVTLDNLEI-QRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVS 404 (546)
Q Consensus 330 l~~~~~~~~---~~~~l~~l~~~~~-~~lp~~~~~~l~~~~~-~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Pls 404 (546)
.+....... ......+.+.+.+ ...|.+... ++.... ....+..+|... ..++..+|++|||||||.++|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~rv~LvGDAAh~~~P~~ 317 (407)
T 3rp8_A 241 FFDVPLPAGLAEDRDTLRADLSRYFAGWAPPVQKL-IAALDPQTTNRIEIHDIEP--FSRLVRGRVALLGDAGHSTTPDI 317 (407)
T ss_dssp EEEEECCTTCSCCTTTHHHHHHHHTTTCCHHHHHH-HHHSCGGGCEEEEEEECCC--CSCCEETTEEECGGGTCCCCGGG
T ss_pred EEEeCCCcCCCCCchhHHHHHHHHhcCCChHHHHH-HHcCCccceeEEeeEecCC--CCceecCCEEEEEcccccCCcch
Confidence 333321111 1112233332222 222222221 011100 000122344432 14667899999999999999999
Q ss_pred CCcchhhHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 405 FGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 405 g~G~g~~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
|||++.+++|+..|++.|.. .+ .....|+.|+
T Consensus 318 GqG~~~al~da~~La~~L~~---~~----~~~~~l~~Y~ 349 (407)
T 3rp8_A 318 GQGGCAAMEDAVVLGAVFRQ---TR----DIAAALREYE 349 (407)
T ss_dssp SCHHHHHHHHHHHHHHHHHS---CC----CHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhc---CC----CHHHHHHHHH
Confidence 99999999999999988863 22 2345678999
No 7
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.96 E-value=4e-28 Score=257.02 Aligned_cols=305 Identities=15% Similarity=0.106 Sum_probs=199.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhh-----cc--CC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATAT-----KF--NP 181 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~-----~~--~~ 181 (546)
+||||||||| +|+++|+.|+++|++|+|+||.++++......+++..++.|..+|+++. +.+.... .+ ..
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~--~~~~~~~~~~~~~~~~~~ 82 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDA--VKAQGFQQKFGAKFVRGK 82 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHH--HHHTTCEEECEEEEEETT
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHH--HHHcCCcccCCcEEEeCC
Confidence 5999999965 6999999999999999999999888765566788889999999998643 2111000 00 00
Q ss_pred C--cccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEE--EcCCc--EEEcCEEEE
Q 009027 182 N--RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLL--LAEGK--ILSSHLIID 255 (546)
Q Consensus 182 ~--~v~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~--~~~g~--~i~ArlVV~ 255 (546)
. .+.|.. .........+.+++..|++.|.+.+.+.|++++.+++|+++..+++++++. +.+|+ +++|++||+
T Consensus 83 ~~~~~~~~~--~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 83 EIADFNFSD--QFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIID 160 (421)
T ss_dssp EEEEEETTS--CSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEE
T ss_pred eeEEEeehh--hcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEE
Confidence 0 001110 001112234679999999999999999999999999999999988876544 45676 799999999
Q ss_pred ecCCChHHHHHhcCCCCCC---eeeeEEEEEeeccCCCce--eeeeccCCcccccCCCCcceEEEEecCCCCCccceEEE
Q 009027 256 AMGNFSPVVKQIRSGRKPD---GVCLVVGSCARGFKDNST--SDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYM 330 (546)
Q Consensus 256 ADG~~S~vr~ql~~~~~~~---~~~~~vg~~~~~~~~~~~--~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~l 330 (546)
|||.+|.++++++...+.. ..+.... .......... ..+.....+. ...+++| .+|..++ .....
T Consensus 161 A~G~~s~l~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~g~~~-~~P~~~~---~~~vg 230 (421)
T 3nix_A 161 ASGYGRVIPRMFGLDKPSGFESRRTLFTH-IKDVKRPVAAEMEGNRITAVVH-----KPKVWIW-VIPFSNG---NTSVG 230 (421)
T ss_dssp CCGGGCHHHHHTTCEECCSSCCCEEEEEE-EECTTCCC----CCSEEEEEEE-----ETTEEEE-EEECTTS---EEEEE
T ss_pred CCCCchhhHHhcCCCCCCcCCCcEEEEEE-ECCCcCCCccCCCCeEEEEEeC-----CCCEEEE-EEEECCC---CEEEE
Confidence 9999999999987653321 2221111 1111110000 1111111111 1356778 7898865 33333
Q ss_pred EEccCC--CCCCccHHHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCcc
Q 009027 331 FTYIDP--QAGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGF 408 (546)
Q Consensus 331 ~~~~~~--~~~~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Plsg~G~ 408 (546)
+..... .....+..++++++....|.+... ++......+ ...+|.+.....++..+|+++||||||+++|++|+|+
T Consensus 231 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~-l~~~~~~~~-~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~ 308 (421)
T 3nix_A 231 FVGEPSYFDEYTGTPEERMRAMIANEGHIAER-FKSEEFLFE-PRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGA 308 (421)
T ss_dssp EEECHHHHTTSCSCHHHHHHHHHHTCTTTHHH-HTTCCBSSC-CEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHH
T ss_pred EEecHHHhhhcCCCHHHHHHHHHHhCcHHHHH-HhcCccccC-ceeecccceeeeeeccCCEEEecccccccCCcccccH
Confidence 322110 111236778888888877766543 223222211 1233444333346678999999999999999999999
Q ss_pred hhhHhhHHHHHHHHHHHHhCCC
Q 009027 409 GSLTRHLGRLSTGVYEAVRGDF 430 (546)
Q Consensus 409 g~~lrd~~~Lae~I~~Al~~g~ 430 (546)
+.++.++..|++.|..+++.+.
T Consensus 309 ~~A~~~a~~la~~l~~~~~~~~ 330 (421)
T 3nix_A 309 TFAMESGSKGGKLAVQFLKGEE 330 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCc
Confidence 9999999999999999987654
No 8
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.96 E-value=2.4e-27 Score=254.85 Aligned_cols=306 Identities=17% Similarity=0.170 Sum_probs=190.9
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCC--Cc-ccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccc
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKG--RE-QEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~--~~-r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~ 185 (546)
+|||||||| ++|+++|+.|+++|++|+||||.+.++ .. ....++ ...|.++|++... ...+..... .+.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~---~~~l~~lg~~~~~--~~~~~~~~~--~~~ 78 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVS---KAHFDKLGMPYPK--GEELENKIN--GIK 78 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEE---HHHHHHTTCCCCC--GGGEEEEEE--EEE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCccccccccc---HHHHHHhcCCCCc--hHHHHhhhc--ceE
Confidence 589999996 569999999999999999999988653 11 223343 4567888886532 111111110 011
Q ss_pred ccCC---ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEE-EEEc---CCc--EEEcCEEEEe
Q 009027 186 FEGK---GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA---EGK--ILSSHLIIDA 256 (546)
Q Consensus 186 f~~~---~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~---~g~--~i~ArlVV~A 256 (546)
+... ..+..+ ..++.+++..|++.|.+++.+.|++++.+++|+++..+++.++ |++. +|+ +++|++||+|
T Consensus 79 ~~~~~~~~~~~~~-~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~A 157 (453)
T 3atr_A 79 LYSPDMQTVWTVN-GEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEA 157 (453)
T ss_dssp EECTTSSCEEEEE-EEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEEC
T ss_pred EECCCCceEEeEC-CCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEEC
Confidence 1110 111111 1346799999999999999999999999999999998888765 5553 565 8999999999
Q ss_pred cCCChHHHHHhcCCCC-----C-CeeeeEEEEEee-c--cCCCceeeeeccCCcccccCCCCcceEEEEecCCCCCccce
Q 009027 257 MGNFSPVVKQIRSGRK-----P-DGVCLVVGSCAR-G--FKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRT 327 (546)
Q Consensus 257 DG~~S~vr~ql~~~~~-----~-~~~~~~vg~~~~-~--~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~ 327 (546)
||.+|.++++++...+ + ............ . ..+.....+++.. +.. ..+|+| .||..++. ..
T Consensus 158 dG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~g~~~-~~P~~~~~--~~ 228 (453)
T 3atr_A 158 TGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQ-ETS-----PGGYWW-YFPKGKNK--VN 228 (453)
T ss_dssp CGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCT-TTS-----TTSCEE-EEEEETTE--EE
T ss_pred cCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECC-CCC-----CCcEEE-EEECCCCe--EE
Confidence 9999999998876431 1 111211111111 0 1011222232221 111 246888 78987651 22
Q ss_pred EEEEEccCCCCCCccHHHHHHHHHHh-CccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCC
Q 009027 328 TYMFTYIDPQAGSPKLEELLERYWDL-MPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFG 406 (546)
Q Consensus 328 ~~l~~~~~~~~~~~~l~~l~~~~~~~-lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Plsg~ 406 (546)
.++...... ...+..+.+.+++.. .|.+.. .++.....+.+|... ...+++.+|++|+|||||.++|++|+
T Consensus 229 vg~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~p~~~-~~~~~~~~~v~lvGDAAh~~~P~~G~ 300 (453)
T 3atr_A 229 VGLGIQGGM--GYPSIHEYYKKYLDKYAPDVDK-----SKLLVKGGALVPTRR-PLYTMAWNGIIVIGDSGFTVNPVHGG 300 (453)
T ss_dssp EEEEEESSS--CCCCHHHHHHHHHHHHCTTEEE-----EEEEEEEEEEEECSS-CCSCSEETTEEECGGGGTCSCTTTCC
T ss_pred EEEEecCCC--CCCCHHHHHHHHHHhhhhhcCC-----CeEEeccceeccCCC-CCCceecCCEEEEeCcccCCCCCccc
Confidence 222222221 112344555555543 333322 122233334566532 23456789999999999999999999
Q ss_pred cchhhHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 407 GFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 407 G~g~~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
|++.++.|+..|++.|..+++.++.+. ..|+.|+
T Consensus 301 G~~~Ai~da~~la~~l~~~l~~~~~~~---~~L~~Y~ 334 (453)
T 3atr_A 301 GKGSAMISGYCAAKAILSAFETGDFSA---SGLWDMN 334 (453)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTCCST---TTTTHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCccH---HHHHHHH
Confidence 999999999999999999987665432 2456777
No 9
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.95 E-value=4.9e-27 Score=246.86 Aligned_cols=311 Identities=15% Similarity=0.128 Sum_probs=186.6
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCC---CCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccc
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLK---GREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~---~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~ 185 (546)
+|||+|||| ++|+++|+.|+++|++|+|+||.+.+ ...+...+++..++.|+++|+++. +... ........+.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~--~~~~-~~~~~~~~~~ 78 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRR--MARD-GLVHEGVEIA 78 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHH--HHHH-CEEESCEEEE
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHH--HHhc-CCccceEEEE
Confidence 589999996 56999999999999999999998753 223444689999999999999753 2111 0011111111
Q ss_pred ccCCc-ccccc----ccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeC-CeEEEEE-cCCc--EEEcCEEEEe
Q 009027 186 FEGKG-EIWVE----DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NAAVLLL-AEGK--ILSSHLIIDA 256 (546)
Q Consensus 186 f~~~~-~l~~~----~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~-dgv~V~~-~~g~--~i~ArlVV~A 256 (546)
..+.. .+..+ ....+.+++..+.+.|.+++.+.|++++.+++|+++..++ +++.|++ ++|+ +++|++||+|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~A 158 (394)
T 1k0i_A 79 FAGQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGC 158 (394)
T ss_dssp ETTEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEEC
T ss_pred ECCceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEEC
Confidence 11100 00000 1234567888999999999998999999999999998763 5677877 6776 7999999999
Q ss_pred cCCChHHHHHhcCCCCC--CeeeeEE-EEEeeccCCCceeeeeccCCcccccCCCCcceEEEEecCCCCCccceEEEEEc
Q 009027 257 MGNFSPVVKQIRSGRKP--DGVCLVV-GSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTY 333 (546)
Q Consensus 257 DG~~S~vr~ql~~~~~~--~~~~~~v-g~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~l~~~ 333 (546)
||.+|.+|++++....+ ....... .......+. ...+.++.. ...+++| .+|..++ ...+.+..
T Consensus 159 dG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--------~~~g~~~-~~~~~~~---~~~~~~~~ 225 (394)
T 1k0i_A 159 DGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPP-VSHELIYAN--------HPRGFAL-CSQRSAT---RSQYYVQV 225 (394)
T ss_dssp CCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCC-SCSSCEEEC--------CTTCCEE-EEEEETT---EEEEEEEE
T ss_pred CCCCcHHHHhcCccccccccccccceeEEEecCCCC-CccceEEEE--------cCCceEE-EEecCCC---cEEEEEEe
Confidence 99999999988643211 1110000 000001110 001111110 0235666 4554333 23333332
Q ss_pred cCCCCC-CccHHHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCcchhhH
Q 009027 334 IDPQAG-SPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLT 412 (546)
Q Consensus 334 ~~~~~~-~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Plsg~G~g~~l 412 (546)
...... ..+..+..+.+.+.++......+....... ...+|.......++..+|++|+|||||.++|++|||+|+++
T Consensus 226 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai 303 (394)
T 1k0i_A 226 PLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSLE--KSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAA 303 (394)
T ss_dssp CTTCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEEE--EEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHH
T ss_pred CCCCCccccCHHHHHHHHHHhhCcccccccccCccee--eEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHH
Confidence 221111 113334444444444332110011101111 12344433223356679999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 413 RHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 413 rd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
+|+..|++.|..++..+. ...|+.|+
T Consensus 304 ~da~~La~~L~~~~~~~~-----~~~L~~Y~ 329 (394)
T 1k0i_A 304 SDVSTLYRLLLKAYREGR-----GELLERYS 329 (394)
T ss_dssp HHHHHHHHHHHHHHHHCC-----GGGGGGHH
T ss_pred HHHHHHHHHHHHHhccCc-----hHHHHHHH
Confidence 999999999998876432 23568898
No 10
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.95 E-value=1.5e-27 Score=251.49 Aligned_cols=306 Identities=15% Similarity=0.115 Sum_probs=191.1
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCC-cccccCCHHHHHHHHHcCCCCcccchhhhhhccCC------
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNP------ 181 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~------ 181 (546)
++||+||||| +|+++|..|+++|++|+|+||.+.++. .+...+++..++.|+++|+++. +... ......
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~--~~~~-~~~~~~~~~~~~ 82 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAE--VTRR-GGRVRHELEVYH 82 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHH--HHHT-TCEEECEEEEEE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHH--HHHh-CCCcceeEEEeC
Confidence 5899999965 699999999999999999999876632 3456789999999999998643 1110 000000
Q ss_pred -C--cccccCCccccccccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEeCCeE--EEEEcCCcEEEcCEEEE
Q 009027 182 -N--RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAA--VLLLAEGKILSSHLIID 255 (546)
Q Consensus 182 -~--~v~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~dgv--~V~~~~g~~i~ArlVV~ 255 (546)
+ ...+.. ..+.. ..+++.+++..|.+.|.+++.+. |++++.+++|+++..+++++ .|++.+|++++|++||+
T Consensus 83 ~g~~~~~~~~-~~~~~-~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~ 160 (399)
T 2x3n_A 83 DGELLRYFNY-SSVDA-RGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVG 160 (399)
T ss_dssp TTEEEEEEET-TSSCG-GGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEE
T ss_pred CCCEEEecch-HHhcc-cCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEE
Confidence 0 001110 00111 12346799999999999999988 89999999999999988888 89988888999999999
Q ss_pred ecCCChHHHHHhcCCCCCC-----e--eeeEEEEEeeccCCCceeeeeccCCcccccCCCCcceEEEEecCCCCCccceE
Q 009027 256 AMGNFSPVVKQIRSGRKPD-----G--VCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTT 328 (546)
Q Consensus 256 ADG~~S~vr~ql~~~~~~~-----~--~~~~vg~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~ 328 (546)
|||.+|.+|++++...+.. . .+.. ..+....+. .. ..+ .+ ..+++| .+|.+++ ...
T Consensus 161 AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~-~~~~~~~~~-~~--~~~--~~-------~~~~~~-~~p~~~~---~~~ 223 (399)
T 2x3n_A 161 ADGIASYVRRRLLDIDVERRPYPSPMLVGTF-ALAPCVAER-NR--LYV--DS-------QGGLAY-FYPIGFD---RAR 223 (399)
T ss_dssp CCCTTCHHHHHTSCCCCCCCCCSSCEEEEEE-ECCHHHHHC-EE--EEE--CT-------TSCEEE-EEEETTT---EEE
T ss_pred CCCCChHHHHHhCCCccccCCCCCCceEEEE-EEecCCCCC-cc--EEE--cC-------CCcEEE-EEEcCCC---EEE
Confidence 9999999999987653221 1 1111 111000111 11 111 11 034566 6776643 222
Q ss_pred EEEEccCCCCC---C-ccHHHHHHHHHHhCcccc-ccccCcceEeeeeeeeecccc-CCCCCccCCcEEEeCCCCCCCCC
Q 009027 329 YMFTYIDPQAG---S-PKLEELLERYWDLMPEYQ-GVTLDNLEIQRVIYGIFPTYR-DSPLPAAFNRILQFGDASGIQSP 402 (546)
Q Consensus 329 ~l~~~~~~~~~---~-~~l~~l~~~~~~~lp~~~-~~~l~~~~~~~~~~g~~P~~~-~~~~~~~~~rvlLVGDAA~~v~P 402 (546)
+.+.+...... . .+.+++.+.+....+.+. .. ++.... .....+|++. ....++..+|++|+|||||.++|
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P 300 (399)
T 2x3n_A 224 LVVSFPREEARELMADTRGESLRRRLQRFVGDESAEA-IAAVTG--TSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHP 300 (399)
T ss_dssp EEEECCHHHHHHHHHSTTSHHHHHHHHTTCCGGGHHH-HHTCCC--STTCEECCCCCEECSCSEETTEEECGGGTEECCG
T ss_pred EEEEeCccccccccccCCHHHHHHHHhhcCCcchhhH-HhcCCc--cceEEechhhcccccccccCcEEEEechhccCCC
Confidence 22212110000 0 111222222222222221 10 111100 0112456654 23346677999999999999999
Q ss_pred CCCCcchhhHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 403 VSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 403 lsg~G~g~~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
++|+|++.+++|+..|++.|..+++.+. +. ...|+.|+
T Consensus 301 ~~GqG~~~al~da~~La~~L~~~~~~~~-~~--~~~l~~Y~ 338 (399)
T 2x3n_A 301 ITGQGMNLAIEDASALADALDLALRDAC-AL--EDALAGYQ 338 (399)
T ss_dssp GGCCHHHHHHHHHHHHHHHHHHHHTTSS-CH--HHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHhhhcccc-hH--HHHHHHHH
Confidence 9999999999999999999999886542 22 34578899
No 11
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.95 E-value=2.3e-26 Score=252.31 Aligned_cols=311 Identities=19% Similarity=0.090 Sum_probs=191.4
Q ss_pred CcccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCC-CcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCC----
Q 009027 109 GTFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKG-REQEWNISRKELLELVESGILVEDDIDEATATKFNPN---- 182 (546)
Q Consensus 109 ~~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~-~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~---- 182 (546)
.++||||||| ++|+++|+.|+++|++|+||||++.+. ..+...+++.+++.|+++|+++. +...-. .....
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~--~~~~~~-~~~~~~~~~ 80 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADE--VVRADD-IRGTQGDFV 80 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHH--HHHSCC-SSCTTSCCE
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHH--HHhhCC-Cccccccee
Confidence 3699999996 569999999999999999999998664 34567899999999999998653 111000 00000
Q ss_pred --cccccCCccc--------------cc-cccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCC----eEEEE
Q 009027 183 --RCGFEGKGEI--------------WV-EDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN----AAVLL 241 (546)
Q Consensus 183 --~v~f~~~~~l--------------~~-~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d----gv~V~ 241 (546)
.+....+..+ .. .....+.+++..|.+.|.+++.+.|++++++++|+++..+++ +++|+
T Consensus 81 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~ 160 (535)
T 3ihg_A 81 IRLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTAR 160 (535)
T ss_dssp EEEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEE
T ss_pred eeEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEE
Confidence 0000000000 00 011245689999999999999999999999999999999998 99998
Q ss_pred EcCC---cEEEcCEEEEecCCChHHHHHhcCCCCCCeee-eEEEEEee-ccCC---CceeeeeccCCcccccCCCCcceE
Q 009027 242 LAEG---KILSSHLIIDAMGNFSPVVKQIRSGRKPDGVC-LVVGSCAR-GFKD---NSTSDVIYSSSSVKKVGDSEVQLF 313 (546)
Q Consensus 242 ~~~g---~~i~ArlVV~ADG~~S~vr~ql~~~~~~~~~~-~~vg~~~~-~~~~---~~~~~i~~~~~~i~~~~~~~~~~~ 313 (546)
+.++ .+++|++||+|||.+|.+|++++++.+..... ..+..... .++. ......+.... .....
T Consensus 161 ~~~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------p~~~~ 232 (535)
T 3ihg_A 161 LAGPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWYYLHH--------PEFKG 232 (535)
T ss_dssp EEETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEEEEEC--------SSCEE
T ss_pred EEcCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEEEEEC--------CCceE
Confidence 8775 68999999999999999999997654211110 01111111 1110 00000000000 01223
Q ss_pred EEEecCCCCCccceEEEEEccCCCCC---CccHHHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccCCcE
Q 009027 314 WEAFPAGSGPLDRTTYMFTYIDPQAG---SPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRI 390 (546)
Q Consensus 314 W~~fp~~~g~~~~~~~l~~~~~~~~~---~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rv 390 (546)
| ++|..++ +...+.+.+...... ..+.+++.+.+.+.++.. . ...+... ...+|.......++..+||
T Consensus 233 ~-~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~-~---~~~~~~~--~~~~~~~~~~a~~~~~grv 303 (535)
T 3ihg_A 233 T-FGPTDRP--DRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAP-E---VKPELVD--IQGWEMAARIAERWREGRV 303 (535)
T ss_dssp E-EEECSST--TEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCS-S---CCCEEEE--EEEEEEEEEEESCSEETTE
T ss_pred E-EEEecCC--CEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCC-C---CceeEEE--eeEeeeeEEEECccccCCE
Confidence 3 3455432 123333333221111 113333333222222110 0 1112111 1234444333456778999
Q ss_pred EEeCCCCCCCCCCCCCcchhhHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 391 LQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 391 lLVGDAA~~v~Plsg~G~g~~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
+|+|||||.++|++|+|+|.++.|+..|++.|..+++... ....|+.|+
T Consensus 304 ~LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~----~~~lL~~Ye 352 (535)
T 3ihg_A 304 FLAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQA----GAGLLDTYE 352 (535)
T ss_dssp EECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSS----CTTHHHHHH
T ss_pred EEEecccccCCCccCCccccccccHHHHHHHHHHHhcCCC----cHHHHHhhH
Confidence 9999999999999999999999999999999999886432 224578899
No 12
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.95 E-value=3.1e-26 Score=257.75 Aligned_cols=307 Identities=14% Similarity=0.139 Sum_probs=191.2
Q ss_pred cccEEEEcc-hHHHHHHHHHHh-----CCCeEEEEcCCCCCCC-cccccCCHHHHHHHHHcCCCCcccchhhhhhccCCC
Q 009027 110 TFDVIVCGG-TLGIFIATALSF-----KGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPN 182 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~-----~G~rVlLlEr~~~~~~-~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~ 182 (546)
++||+|||| ++|+++|+.|++ .|++|+||||.+.+.. .+...|++++++.|+++|++++. .. ......
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l--~~---~~~~~~ 82 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKI--LS---EANDMS 82 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHH--HT---TCBCCC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHH--HH---hccccc
Confidence 689999995 579999999999 9999999999876543 45678999999999999997531 11 111111
Q ss_pred cccccCC---ccc-----------cccccccceeCHHHHHHHHHHHHHhcC---CEEEeCceEEEEEEeC--------Ce
Q 009027 183 RCGFEGK---GEI-----------WVEDILNLGVSPAKLIEIVKKRFISLG---GVIFEGYSVSSICTYE--------NA 237 (546)
Q Consensus 183 ~v~f~~~---~~l-----------~~~~~l~~~V~~~~L~~~L~~~a~~~G---~~v~~~t~v~~i~~~~--------dg 237 (546)
.+.|... ..+ .......+.+++..|++.|.+++.+.| ++|..+++++++..++ ++
T Consensus 83 ~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~ 162 (665)
T 1pn0_A 83 TIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYP 162 (665)
T ss_dssp EEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCC
T ss_pred eEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCC
Confidence 1111110 000 011112356899999999999999887 7999999999998875 46
Q ss_pred EEEEEc------------------------------------------CC--cEEEcCEEEEecCCChHHHHHhcCCCCC
Q 009027 238 AVLLLA------------------------------------------EG--KILSSHLIIDAMGNFSPVVKQIRSGRKP 273 (546)
Q Consensus 238 v~V~~~------------------------------------------~g--~~i~ArlVV~ADG~~S~vr~ql~~~~~~ 273 (546)
|+|++. +| ++++|++||+|||.+|.||+++++....
T Consensus 163 V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g 242 (665)
T 1pn0_A 163 VTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIG 242 (665)
T ss_dssp EEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEE
T ss_pred EEEEEEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCC
Confidence 777653 34 4799999999999999999999875421
Q ss_pred Ceee---eEEEEEee-ccCCCceeeeeccCCcccccCCCCcceEEEEecCCCCCccceEEEEEccCCC-------CCCcc
Q 009027 274 DGVC---LVVGSCAR-GFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQ-------AGSPK 342 (546)
Q Consensus 274 ~~~~---~~vg~~~~-~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~l~~~~~~~-------~~~~~ 342 (546)
.... .++..... .+++... ...... . ..+.+| ++|..++ ...+.+...... ....+
T Consensus 243 ~~~~~~~~v~d~~~~~~~p~~~~-~~~~~~-------~-~~g~~~-~~P~~~~---~~r~~~~~~~~~~~~~~~~~~~~t 309 (665)
T 1pn0_A 243 EQTDYIWGVLDAVPASNFPDIRS-RCAIHS-------A-ESGSIM-IIPRENN---LVRFYVQLQARAEKGGRVDRTKFT 309 (665)
T ss_dssp EEEEEEEEEEEEEEECCCTTTTS-EEEEEC-------S-SSCEEE-EEECSTT---CEEEEEEECC----------CCCC
T ss_pred CCccEEEEEEEEEECCCCCCcce-EEEEEe-------C-CCceEE-EEEcCCC---EEEEEEEeCCccccccccCcCCCC
Confidence 1111 11111000 1211100 011000 0 134555 5787654 333333322211 01124
Q ss_pred HHHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCcc-CCcEEEeCCCCCCCCCCCCCcchhhHhhHHHHHHH
Q 009027 343 LEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAA-FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTG 421 (546)
Q Consensus 343 l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~-~~rvlLVGDAA~~v~Plsg~G~g~~lrd~~~Lae~ 421 (546)
.+++.+.+.+.+..+. ..+.... .+..++.......++. .+||+|+|||||.++|++|||+|+++.|+..|+..
T Consensus 310 ~e~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawk 384 (665)
T 1pn0_A 310 PEVVIANAKKIFHPYT-FDVQQLD----WFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWK 384 (665)
T ss_dssp HHHHHHHHHHHHTTSC-CEEEEEE----EEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCccc-CceeeEE----EEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHH
Confidence 5555554433332211 0111111 1223444333344666 69999999999999999999999999999999999
Q ss_pred HHHHHhCCCCChhhHHHHhhhh
Q 009027 422 VYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 422 I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
|...++. . + ....|+.|+
T Consensus 385 La~vl~g-~-a--~~~lL~tYe 402 (665)
T 1pn0_A 385 LGLVLTG-R-A--KRDILKTYE 402 (665)
T ss_dssp HHHHHTT-C-B--CGGGGHHHH
T ss_pred HHHHHcC-C-C--cHHHHHHHH
Confidence 9988863 2 1 234678999
No 13
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.95 E-value=1.9e-26 Score=251.90 Aligned_cols=313 Identities=19% Similarity=0.191 Sum_probs=193.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHH-HHHHcCCCCcccchhhhh-------hccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELL-ELVESGILVEDDIDEATA-------TKFN 180 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~-~L~~lGl~~~~~ie~~i~-------~~~~ 180 (546)
+||||||||| +|+++|+.|+++|++|+||||.+.++......+.+.... .+..+|+++. +..... ..+.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~--~~~~~~~~~~~~~~~~~ 84 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDE--MKRAGFPIKRGGTFRWG 84 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHH--HHTTTCCEECEEEEECS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHH--HHHcCCccccCceEEec
Confidence 5999999965 699999999999999999999987765555567776554 7888898643 111000 0000
Q ss_pred C--C--cccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeE---EEEEcCCc--EEEcC
Q 009027 181 P--N--RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA---VLLLAEGK--ILSSH 251 (546)
Q Consensus 181 ~--~--~v~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv---~V~~~~g~--~i~Ar 251 (546)
. . .+.|.... .......+.+++..|.+.|.+++.+.|++++.+++|+++..+++.+ ++...+|+ +++|+
T Consensus 85 ~~~~~~~~~~~~~~--~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad 162 (512)
T 3e1t_A 85 KEPEPWTFGFTRHP--DDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHAR 162 (512)
T ss_dssp SCSSCEEEESSSSS--SSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEE
T ss_pred CCccccccccccCC--CCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcC
Confidence 0 0 01111100 1112235679999999999999999999999999999999988864 44444564 89999
Q ss_pred EEEEecCCChHHHHHhcCCCC---CCeeeeEEEEEee--ccCCCceeeeeccCCcccccCCCCcceEEEEecCCCCCccc
Q 009027 252 LIIDAMGNFSPVVKQIRSGRK---PDGVCLVVGSCAR--GFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDR 326 (546)
Q Consensus 252 lVV~ADG~~S~vr~ql~~~~~---~~~~~~~vg~~~~--~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~ 326 (546)
+||+|||.+|.++++++.... +...+. .+.... ..+.......+.. .. ..+++| .+|..++ .
T Consensus 163 ~VI~AdG~~S~vr~~lg~~~~~~~~~~~a~-~~~~~~~~~~~~~~~~~~~~~---~~-----~~G~~~-~~Pl~~~---~ 229 (512)
T 3e1t_A 163 FIVDASGNRTRVSQAVGERVYSRFFQNVAL-YGYFENGKRLPAPRQGNILSA---AF-----QDGWFW-YIPLSDT---L 229 (512)
T ss_dssp EEEECCCTTCSSGGGTCCEEECSTTCEEEE-EEEEESCCCCSTTCTTSEEEE---EE-----TTEEEE-EEECSSS---E
T ss_pred EEEECCCcchHHHHHcCCCccCchhcceEE-EEEecCCccCCCCCcCceEEE---Ee-----CCceEE-EEEeCCC---e
Confidence 999999999999999854311 112221 111110 0111111111110 00 246788 7898865 3
Q ss_pred eEEEEEccC--CCCCCccHHHHHHHHHHhCccccccccCcceEe-eeeeeeec---cccCCCCCccCCcEEEeCCCCCCC
Q 009027 327 TTYMFTYID--PQAGSPKLEELLERYWDLMPEYQGVTLDNLEIQ-RVIYGIFP---TYRDSPLPAAFNRILQFGDASGIQ 400 (546)
Q Consensus 327 ~~~l~~~~~--~~~~~~~l~~l~~~~~~~lp~~~~~~l~~~~~~-~~~~g~~P---~~~~~~~~~~~~rvlLVGDAA~~v 400 (546)
....+.+.. .........+.+++++...|.+... +...... ...++.++ .+.....++..+|++|||||||++
T Consensus 230 ~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~-l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~ 308 (512)
T 3e1t_A 230 TSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEY-LAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFV 308 (512)
T ss_dssp EEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHH-HTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEEC
T ss_pred EEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHH-HhcCccccccccccceeeccccccccccccCCEEEEechhhcC
Confidence 333332221 1111124567777777666654432 1111100 00001111 111112356789999999999999
Q ss_pred CCCCCCcchhhHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 401 SPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 401 ~Plsg~G~g~~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
+|++|+|++++++|+..|++.|..++..+. +. -..|+.|+
T Consensus 309 ~P~~GqG~~~Al~dA~~La~~L~~~l~~~~-~~--~~aL~~Ye 348 (512)
T 3e1t_A 309 DPVFSSGVHLATYSALLVARAINTCLAGEM-SE--QRCFEEFE 348 (512)
T ss_dssp CSTTCCHHHHHHHHHHHHHHHHHHHTTTCS-CH--HHHHHHHH
T ss_pred CCccccCHHHHHHHHHHHHHHHHHHHcCCc-cH--HHHHHHHH
Confidence 999999999999999999999998876432 22 23567888
No 14
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.94 E-value=5.1e-26 Score=252.51 Aligned_cols=315 Identities=15% Similarity=0.106 Sum_probs=196.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhh-------ccCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATAT-------KFNP 181 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~-------~~~~ 181 (546)
++|||||||| +|+++|+.|+++|++|+|||+.+.++......+++.....|+.+|+++. +...... .+..
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~--l~~~~~~~~~~~~~~~~~ 100 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEK--IDAQNYVKKPSATFLWGQ 100 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHH--HHHHCCEEECEEEEECSS
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHH--HHhcCCcccCCcEEEecC
Confidence 5899999965 6999999999999999999999888766667899999999999998743 2111000 0000
Q ss_pred ----CcccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEe-CCeEEEEEc-CC--cEEEcCEE
Q 009027 182 ----NRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY-ENAAVLLLA-EG--KILSSHLI 253 (546)
Q Consensus 182 ----~~v~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~-~dgv~V~~~-~g--~~i~ArlV 253 (546)
....|............++.+++..|.+.|.+++.+.|++++++++|+++..+ ++.+.|++. +| .+++|++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~AdlV 180 (591)
T 3i3l_A 101 DQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVESDFV 180 (591)
T ss_dssp SCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEESEE
T ss_pred CCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEcCEE
Confidence 01111110000001123467999999999999999999999999999999875 556778776 66 58999999
Q ss_pred EEecCCChHHHHHhcCCCCCCeeee-EEEEEeec---cCCCceeeeeccCCcccccCCCCcceEEEEecCCCCCccceEE
Q 009027 254 IDAMGNFSPVVKQIRSGRKPDGVCL-VVGSCARG---FKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTY 329 (546)
Q Consensus 254 V~ADG~~S~vr~ql~~~~~~~~~~~-~vg~~~~~---~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~ 329 (546)
|+|||.+|.++++++.......... .+...... .+.......+.. .. ..+++| .+|..++ ....
T Consensus 181 V~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~---~~-----~~G~~w-~iPl~~~---~~sv 248 (591)
T 3i3l_A 181 IDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSI---TF-----EDGWVW-MIPIKDD---LYSV 248 (591)
T ss_dssp EECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEE---EE-----TTEEEE-EEECSSS---EEEE
T ss_pred EECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEE---Ec-----CCcEEE-EEECCCC---eEEE
Confidence 9999999999999876432111110 01011110 011001111110 00 246778 7888754 3232
Q ss_pred EEEccCCCCC---CccHHHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCC
Q 009027 330 MFTYIDPQAG---SPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFG 406 (546)
Q Consensus 330 l~~~~~~~~~---~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Plsg~ 406 (546)
.+........ ..+..++++++....|.+... +......... ..++.+.....++..+|+++||||||+++|++|+
T Consensus 249 ~~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~-l~~~~~~~~~-~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~Gq 326 (591)
T 3i3l_A 249 GLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDI-LGGAEQVDEV-RIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQ 326 (591)
T ss_dssp EEEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHH-HTTCEECSCC-EEEEEEEEEESCSEETTEEECGGGTCBCCGGGCC
T ss_pred EEEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHH-HhcCccccCc-eEecccccchhhcccCCEEEEccccccCCCcccc
Confidence 2222111100 113456666666666654332 1111110000 0111111122356789999999999999999999
Q ss_pred cchhhHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 407 GFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 407 G~g~~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
|++++++|+..|++.|..++..+.. .-..++.|+
T Consensus 327 GinlAl~dA~~LA~~L~~~l~~~~~---~~~al~~Y~ 360 (591)
T 3i3l_A 327 GVHLASQSAVSAAAAIDRITRHGDE---KDAVHAWYN 360 (591)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCGGG---HHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCch---HHHHHHHHH
Confidence 9999999999999999999875431 123467788
No 15
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.94 E-value=3.1e-26 Score=240.07 Aligned_cols=304 Identities=18% Similarity=0.102 Sum_probs=184.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCC-cccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
.+||+||||| +|+++|..|+++|++|+|+||.+.++. .+...+++..++.|+++|+++. +.. .......+.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~--~~~---~~~~~~~~~~~ 85 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDD--VLQ---GSHTPPTYETW 85 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHH--HHT---TCBCCSCEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHH--HHh---hCCCccceEEE
Confidence 5899999965 699999999999999999999887653 3456788999999999998642 111 11111111111
Q ss_pred C-Cccc---cccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChHH
Q 009027 188 G-KGEI---WVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 188 ~-~~~l---~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~v 263 (546)
. +..+ ..+....+.+++..|.+.|.+++.+.|++++.+++|+++.. ++ .|++.+|++++|++||+|||.+|.+
T Consensus 86 ~~g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~--~~-~v~~~~g~~~~ad~vV~AdG~~s~v 162 (379)
T 3alj_A 86 MHNKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP--VG-RLTLQTGEVLEADLIVGADGVGSKV 162 (379)
T ss_dssp ETTEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET--TT-EEEETTSCEEECSEEEECCCTTCHH
T ss_pred eCCceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe--CC-EEEECCCCEEEcCEEEECCCccHHH
Confidence 1 1110 00011236789999999999999999999999999999976 45 7888888899999999999999999
Q ss_pred HHHhcCCCCCCe--eeeEEEEEeecc---CC---CceeeeeccCCcccccCCCCcceEEEEecCCCCCccceEEEEEccC
Q 009027 264 VKQIRSGRKPDG--VCLVVGSCARGF---KD---NSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYID 335 (546)
Q Consensus 264 r~ql~~~~~~~~--~~~~vg~~~~~~---~~---~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~l~~~~~ 335 (546)
+++++....+.. .....+.+.... +. ....+.+..++ ..+++| .+|..++ .....+....
T Consensus 163 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~p~~~~---~~~~~~~~~~ 230 (379)
T 3alj_A 163 RDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWP--------RVQRIL-YSPCNEN---ELYLGLMAPA 230 (379)
T ss_dssp HHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSS--------SCCEEE-EEECSSS---EEEEEEEECT
T ss_pred HHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEEC--------CCCEEE-EEECCCC---cEEEEEEecC
Confidence 999975321111 100011111000 10 01112110111 246777 7898765 2232333321
Q ss_pred CCCCCccHHHHHHHHHHhCccccccccCcceEeeeeeeeeccccC-CCCCccCCcEEEeCCCCCCCCCCCCCcchhhHhh
Q 009027 336 PQAGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRD-SPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRH 414 (546)
Q Consensus 336 ~~~~~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~-~~~~~~~~rvlLVGDAA~~v~Plsg~G~g~~lrd 414 (546)
..+....+.+.++++...++.+... ++....... ..+|++.. ...++..+|++|||||||.++|++|+|+|++++|
T Consensus 231 ~~~~~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~~--~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~d 307 (379)
T 3alj_A 231 ADPRGSSVPIDLEVWVEMFPFLEPC-LIEAAKLKT--ARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVN 307 (379)
T ss_dssp TCTTTTCSSCCHHHHHHHCGGGHHH-HHHHHTCTT--CCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCchhccHHHH-HhhCCccce--EEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHH
Confidence 1111123444455555444411111 000000000 01222211 1235567999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 415 LGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 415 ~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
+..|++.|... + + ....|+.|+
T Consensus 308 a~~La~~L~~~---~--~--~~~~l~~Y~ 329 (379)
T 3alj_A 308 AFSLSQDLEEG---S--S--VEDALVAWE 329 (379)
T ss_dssp HHHHHHHTTSS---S--C--HHHHHHHHH
T ss_pred HHHHHHHhccc---c--C--HHHHHHHHH
Confidence 99998877531 1 1 134578898
No 16
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.94 E-value=2.3e-25 Score=235.08 Aligned_cols=301 Identities=15% Similarity=0.130 Sum_probs=176.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCC--cccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR--EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~--~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
.+||+||||| +|+++|+.|+++|++|+|+||.+.+.. ...+.+++..++.|.++|+++ ... ........+
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~~~------~~~~~~~~~ 77 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-DSI------SVPSSSMEY 77 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-GGT------CBCCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-ccc------cccccceEE
Confidence 5899999965 699999999999999999999876522 334568999999999999975 111 011111111
Q ss_pred c---CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChHH
Q 009027 187 E---GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 187 ~---~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~v 263 (546)
. .+..+.........+++..|.+.|.+.+ .|++++.+++|+++..++++++|++.+|++++|++||+|||.+|.+
T Consensus 78 ~~~~~g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~v 155 (397)
T 2vou_A 78 VDALTGERVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASVV 155 (397)
T ss_dssp EETTTCCEEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCHH
T ss_pred EecCCCCccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchhH
Confidence 1 1111111000112366788888888876 4889999999999999999999999889899999999999999999
Q ss_pred HHHhcCCCCCCeeee--EEEEEee-ccCCC------ceeeeeccCCcccccCCCCcceEEEEecCCCCCcc---ceEEEE
Q 009027 264 VKQIRSGRKPDGVCL--VVGSCAR-GFKDN------STSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLD---RTTYMF 331 (546)
Q Consensus 264 r~ql~~~~~~~~~~~--~vg~~~~-~~~~~------~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~---~~~~l~ 331 (546)
|++++ ...+..... ..+.+.. .++.. ....++... +..++ .+|.+++... ...+.+
T Consensus 156 r~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~~~g~~~~~~~~~~ 223 (397)
T 2vou_A 156 RKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLD---------DGHLI--AYPIPGRENAESPRLNFQW 223 (397)
T ss_dssp HHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEET---------TEEEE--EEEECCSSTTSCCEEEEEE
T ss_pred HHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecC---------CCEEE--EEECCCCCCccceeEEEEE
Confidence 99998 543321110 1111110 01000 000010000 11111 1222110000 111111
Q ss_pred EccCCC----------C--------------CCccHHHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccC
Q 009027 332 TYIDPQ----------A--------------GSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAF 387 (546)
Q Consensus 332 ~~~~~~----------~--------------~~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~ 387 (546)
...... . ....+.++.+.+...++.+... ++... .. ..+|++.....++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~-~~~~~~~~~~~~~~~ 298 (397)
T 2vou_A 224 YWNVAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQFHSKGESLFKPFRDL-VLNAS---SP-FVTVVADATVDRMVH 298 (397)
T ss_dssp EEECCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHHHHHHHTTSCHHHHHH-HHHCS---SC-EEEEEEEBCCSCSEE
T ss_pred EecCCCccchhhhccCCCCcccccccCcccCCHHHHHHHHHHHHhhChHHHHH-HhccC---Cc-ceeeeeeecCCceec
Confidence 110000 0 0113334444332222222211 01100 00 123444333446778
Q ss_pred CcEEEeCCCCCCCCCCCCCcchhhHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 388 NRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 388 ~rvlLVGDAA~~v~Plsg~G~g~~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
+||+|+|||||.++|++|||+|++++|+..|++.|.. .+ +. -..|+.|+
T Consensus 299 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~---~~--~~--~~~L~~Ye 347 (397)
T 2vou_A 299 GRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK---NH--DL--RGSLQSWE 347 (397)
T ss_dssp TTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH---CS--CH--HHHHHHHH
T ss_pred CcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc---CC--CH--HHHHHHHH
Confidence 9999999999999999999999999999999988763 11 21 35678999
No 17
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.94 E-value=7.1e-26 Score=237.53 Aligned_cols=320 Identities=17% Similarity=0.163 Sum_probs=174.3
Q ss_pred cEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCCc-cc--ccCCHHHHHHHHHcCCCCcccchhhhh-hccCCCcccc
Q 009027 112 DVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGRE-QE--WNISRKELLELVESGILVEDDIDEATA-TKFNPNRCGF 186 (546)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~~-r~--~~Is~~~l~~L~~lGl~~~~~ie~~i~-~~~~~~~v~f 186 (546)
.|+|||| ++|+++|+.|+++|++|+|+||.+.+... ++ ..+++..++.|+++|+.+. +..+.. .........+
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~--~~~~~~~~~~~~~~~~~ 80 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAEN--WLAFEEASRYIGGQSRF 80 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHH--HHHHHHHCEEECCCCEE
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHH--HHHhhhhhcccCcceeE
Confidence 5999995 57999999999999999999999877542 23 3578999999999998542 111110 0010000000
Q ss_pred ----------cCC-cccc--ccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCC-eEEEEEcCCcEEEcCE
Q 009027 187 ----------EGK-GEIW--VEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHL 252 (546)
Q Consensus 187 ----------~~~-~~l~--~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d-gv~V~~~~g~~i~Arl 252 (546)
.+. .+.. ......+.|++..|.++|.+.+ +.+|+.++++++++..++ .++|+++||++++||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adl 157 (412)
T 4hb9_A 81 YNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDV 157 (412)
T ss_dssp ECTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESE
T ss_pred ecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeE
Confidence 000 0000 0011124688999999887654 457999999999987655 5889999999999999
Q ss_pred EEEecCCChHHHHHhcCCCCCCeee--eEEEEEeeccC-CCceeeeeccCCcccccCCCCc---ceEEEEecCCCCC---
Q 009027 253 IIDAMGNFSPVVKQIRSGRKPDGVC--LVVGSCARGFK-DNSTSDVIYSSSSVKKVGDSEV---QLFWEAFPAGSGP--- 323 (546)
Q Consensus 253 VV~ADG~~S~vr~ql~~~~~~~~~~--~~vg~~~~~~~-~~~~~~i~~~~~~i~~~~~~~~---~~~W~~fp~~~g~--- 323 (546)
||+|||.+|.||++++...+..... ...+....... .....+.+....+....+.... -.+| ..|.....
T Consensus 158 vVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 236 (412)
T 4hb9_A 158 LVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMW-RAPVNIHVEAS 236 (412)
T ss_dssp EEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEE-EEESCTTSCGG
T ss_pred EEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeee-ecCCceeEEEe
Confidence 9999999999999997654432211 11111110000 0000000000001000000011 1112 12211100
Q ss_pred ----ccceEEEEEcc-CCCCCC---ccHHHHHHHHHHh----CccccccccCcceEeeeeeeeeccccC-CCCCccCCcE
Q 009027 324 ----LDRTTYMFTYI-DPQAGS---PKLEELLERYWDL----MPEYQGVTLDNLEIQRVIYGIFPTYRD-SPLPAAFNRI 390 (546)
Q Consensus 324 ----~~~~~~l~~~~-~~~~~~---~~l~~l~~~~~~~----lp~~~~~~l~~~~~~~~~~g~~P~~~~-~~~~~~~~rv 390 (546)
.+...+++... +..+.. .+.+.+.+.+... .|.++.. ++...... . ..++.+.. ...++..+||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l-i~~~~~~~-~-~~~~~~~~~~~~~~~~grv 313 (412)
T 4hb9_A 237 LAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTL-VQQSDMEN-I-SPLHLRSMPHLLPWKSSTV 313 (412)
T ss_dssp GCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHH-HHTSCTTC-C-EEEEEEECCCCCCCCCCSE
T ss_pred ccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHH-HHhcccce-e-ccchhccccccccccccCE
Confidence 01111122111 111111 1222222222222 2322221 01110000 0 01111111 1235678999
Q ss_pred EEeCCCCCCCCCCCCCcchhhHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 391 LQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 391 lLVGDAA~~v~Plsg~G~g~~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
+|+|||||.++|++|||.|+++.|+..|++.|..++.... +. -..|+.||
T Consensus 314 ~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~-~~--~~aL~~Ye 363 (412)
T 4hb9_A 314 TLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHE-EL--VKAISDYE 363 (412)
T ss_dssp EECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSS-CH--HHHHHHHH
T ss_pred EEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCc-CH--HHHHHHHH
Confidence 9999999999999999999999999999999998876532 21 23578999
No 18
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.94 E-value=6.4e-25 Score=246.12 Aligned_cols=310 Identities=17% Similarity=0.191 Sum_probs=189.2
Q ss_pred CcccEEEEcc-hHHHHHHHHHHh-CCCeEEEEcCCCCCCC-cccccCCHHHHHHHHHcCCCCcccchhhhh--h---ccC
Q 009027 109 GTFDVIVCGG-TLGIFIATALSF-KGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATA--T---KFN 180 (546)
Q Consensus 109 ~~yDVIIVGG-g~G~~~Aa~LA~-~G~rVlLlEr~~~~~~-~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~--~---~~~ 180 (546)
.++||+|||| ++|+++|+.|++ +|++|+||||.+.+.. .+...+++.+++.|+++|++++ +..... . -+.
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~--~~~~~~~~~~~~~~~ 108 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADS--ILKEACWINDVTFWK 108 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHH--HHHHSEEECEEEEEE
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHH--HHHhcccccceEEEC
Confidence 3699999996 579999999999 9999999999887653 3567899999999999998643 111000 0 000
Q ss_pred -----CCcccccCC---ccccccccccceeCHHHHHHHHHHHHHhcCC--EEEeCceEEEEEEeCC----eEEEEEc---
Q 009027 181 -----PNRCGFEGK---GEIWVEDILNLGVSPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN----AAVLLLA--- 243 (546)
Q Consensus 181 -----~~~v~f~~~---~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~--~v~~~t~v~~i~~~~d----gv~V~~~--- 243 (546)
...+..... ..........+.+++..+.+.|.+++.+.|+ +|+.+++|+++..+++ +++|++.
T Consensus 109 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~ 188 (639)
T 2dkh_A 109 PDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCD 188 (639)
T ss_dssp ECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECS
T ss_pred CCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecc
Confidence 011100000 0000011123568999999999999999987 9999999999998763 5777765
Q ss_pred ---CC--cEEEcCEEEEecCCChHHHHHhcCCCC---CCeeeeEEEEEe-eccCCCceeeeeccCCcccccCCCCcceEE
Q 009027 244 ---EG--KILSSHLIIDAMGNFSPVVKQIRSGRK---PDGVCLVVGSCA-RGFKDNSTSDVIYSSSSVKKVGDSEVQLFW 314 (546)
Q Consensus 244 ---~g--~~i~ArlVV~ADG~~S~vr~ql~~~~~---~~~~~~~vg~~~-~~~~~~~~~~i~~~~~~i~~~~~~~~~~~W 314 (546)
+| .+++|++||+|||.+|.+|+++++..+ ......++.... ..+++.. ....+.. ..+++|
T Consensus 189 ~~~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~---------~~g~~~ 258 (639)
T 2dkh_A 189 AAHAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVR-YKVAIQS---------EQGNVL 258 (639)
T ss_dssp GGGTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTT-SEEEEEE---------TTEEEE
T ss_pred ccCCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccc-eeEEEEc---------CCceEE
Confidence 45 479999999999999999999986532 111111111111 1122110 0011100 135566
Q ss_pred EEecCCCCCccceEEEEEccC--CC----CCCccHHHHHHHHHHhCccccccccCcceEeee-eeeeeccccCCCCCcc-
Q 009027 315 EAFPAGSGPLDRTTYMFTYID--PQ----AGSPKLEELLERYWDLMPEYQGVTLDNLEIQRV-IYGIFPTYRDSPLPAA- 386 (546)
Q Consensus 315 ~~fp~~~g~~~~~~~l~~~~~--~~----~~~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~-~~g~~P~~~~~~~~~~- 386 (546)
.+|..++ ....+.+.... .. ....+.+++.+.+.+.+..+. ..+... .+..++.......++.
T Consensus 259 -~~P~~~~--~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~a~~~~~ 329 (639)
T 2dkh_A 259 -IIPREGG--HLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYK------LEVKNVPWWSVYEIGQRICAKYDD 329 (639)
T ss_dssp -EEECTTS--SCEEEEEECC-----------CCCHHHHHHHHHHHHTTSC------EEEEEEEEEEEECCCCEECSCSBS
T ss_pred -EEEcCCC--cEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCccc------CcceeeeEEEecccccchhhhhhc
Confidence 6787654 12333333221 00 011245555554433222111 111111 1123333222223444
Q ss_pred -----------CCcEEEeCCCCCCCCCCCCCcchhhHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 387 -----------FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 387 -----------~~rvlLVGDAA~~v~Plsg~G~g~~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
.+||+|+|||||.++|++|||+|.++.|+..|+..|...++. . + ....|+.|+
T Consensus 330 ~~~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g-~-a--~~~lL~~Ye 393 (639)
T 2dkh_A 330 VVDAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRK-Q-C--APELLHTYS 393 (639)
T ss_dssp CCCSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTT-S-B--CGGGGHHHH
T ss_pred cccccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcC-C-C--cHHHHHHHH
Confidence 799999999999999999999999999999999999988863 2 1 234578899
No 19
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.93 E-value=2e-24 Score=238.01 Aligned_cols=301 Identities=14% Similarity=0.107 Sum_probs=184.6
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCC-cccccCCHHHHHHHHHcCCCCcccchhhh-hh------cc-
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEAT-AT------KF- 179 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r~~~Is~~~l~~L~~lGl~~~~~ie~~i-~~------~~- 179 (546)
++||+|||| ++|+++|+.|+++|++|+||||.+.+.. .+...+++.+++.|+++|+++. +.+.. .. .+
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~--~~~~~~~~~~~~~~~~~ 103 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQ--IRTAGWPGDHPLDAAWV 103 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHH--HHTSSCCTTSBCCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHH--HHhhcCCcccccceEEe
Confidence 589999995 5799999999999999999999876643 4567899999999999998643 11100 00 00
Q ss_pred ---CCCc---ccccCCc---cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcC---C--
Q 009027 180 ---NPNR---CGFEGKG---EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE---G-- 245 (546)
Q Consensus 180 ---~~~~---v~f~~~~---~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~---g-- 245 (546)
.... +.+.... .........+.+++..|++.|.+++.+. ++.+++|+++..++++|+|++.+ |
T Consensus 104 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~~ 180 (549)
T 2r0c_A 104 TRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGAT 180 (549)
T ss_dssp SSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCCE
T ss_pred ccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCCE
Confidence 0000 0010000 0000011236789999999999999876 99999999999999999888765 5
Q ss_pred cEEEcCEEEEecCCChHHHHHhcCCCCC---CeeeeEEEEEeec--cC---CCceeeeeccCCcccccCCCCcceEEEEe
Q 009027 246 KILSSHLIIDAMGNFSPVVKQIRSGRKP---DGVCLVVGSCARG--FK---DNSTSDVIYSSSSVKKVGDSEVQLFWEAF 317 (546)
Q Consensus 246 ~~i~ArlVV~ADG~~S~vr~ql~~~~~~---~~~~~~vg~~~~~--~~---~~~~~~i~~~~~~i~~~~~~~~~~~W~~f 317 (546)
.+++|++||+|||.+|.+|+++++..+. ...+.. ..... +. ........+.. .+ +...+| ++
T Consensus 181 ~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~p----~~~~~~-~~ 250 (549)
T 2r0c_A 181 RAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRN--ILFRAPELRSLLGERAALFFFLM---LS----SSLRFP-LR 250 (549)
T ss_dssp EEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEE--EEEECTTHHHHHGGGCCSEEEEE---EE----TTEEEE-EE
T ss_pred EEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEE--EEEECCchHHhcCCCCceEEEEE---CC----CCcEEE-EE
Confidence 4799999999999999999999875432 121111 11110 00 00000000000 00 102333 45
Q ss_pred cCCCCCccceEEEEEccC-CC-CCCccHHHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCC
Q 009027 318 PAGSGPLDRTTYMFTYID-PQ-AGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGD 395 (546)
Q Consensus 318 p~~~g~~~~~~~l~~~~~-~~-~~~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGD 395 (546)
|..++ .. +.+.... .. .....+.+.+.+++. . .. . .+... ...++.......++..+||+|+||
T Consensus 251 p~~~~--~~--~~~~~~~~~~~~~~~~~~~~l~~~~~---~--~~--~-~~~~~--~~~~~~~~~~a~~~~~grv~L~GD 316 (549)
T 2r0c_A 251 ALDGR--GL--YRLTVGVDDASKSTMDSFELVRRAVA---F--DT--E-IEVLS--DSEWHLTHRVADSFSAGRVFLTGD 316 (549)
T ss_dssp ESSSS--SE--EEEEEECSTTCCSCCCHHHHHHHHBC---S--CC--C-CEEEE--EEEEEECCEECSCSEETTEEECGG
T ss_pred EECCC--cE--EEEEecCCCCCCCHHHHHHHHHHHhC---C--CC--c-eeEEE--EecchhHhhhHHhhcCCcEEEEcc
Confidence 65432 12 2222111 11 111245555554432 1 11 1 11111 123444333344677899999999
Q ss_pred CCCCCCCCCCCcchhhHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 396 ASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 396 AA~~v~Plsg~G~g~~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
|||.++|++|||+|.+++|+..|++.|...++... . ...|..|+
T Consensus 317 AAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a-~---~~lL~~Y~ 360 (549)
T 2r0c_A 317 AAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGWA-G---PGLLATYE 360 (549)
T ss_dssp GTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCS-C---TTTTHHHH
T ss_pred ccccCCCccCCccccccHHHHHHHHHHHHHHcCCC-C---HHHHHHHH
Confidence 99999999999999999999999999998886421 1 23567898
No 20
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.93 E-value=1.8e-24 Score=229.11 Aligned_cols=305 Identities=18% Similarity=0.248 Sum_probs=181.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCe-EEEEcCCCCCCC-cccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLR-VAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~r-VlLlEr~~~~~~-~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
++|||||||| +|+++|+.|+++|++ |+|+||.+.++. .+...++++.++.|+++|+++. +... ......+.+
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~--l~~~---~~~~~~~~~ 78 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPA--LAAT---AIPTHELRY 78 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHH--HHHH---SEEECEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHH--HHhh---CCCcceEEE
Confidence 5899999964 699999999999999 999999887653 3456789999999999998643 2111 000001111
Q ss_pred cC--Cccccc-------c-ccccceeCHHHHHHHHHHHHHh-cCC-EEEeCceEEEEEEeCCeEEEEEcC---C--cEEE
Q 009027 187 EG--KGEIWV-------E-DILNLGVSPAKLIEIVKKRFIS-LGG-VIFEGYSVSSICTYENAAVLLLAE---G--KILS 249 (546)
Q Consensus 187 ~~--~~~l~~-------~-~~l~~~V~~~~L~~~L~~~a~~-~G~-~v~~~t~v~~i~~~~dgv~V~~~~---g--~~i~ 249 (546)
.. +..+.. . ....+.+++..|.+.|.+++.+ .|+ +++.+++|+++.. +++++|++.+ | .+++
T Consensus 79 ~~~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ 157 (410)
T 3c96_A 79 IDQSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALG 157 (410)
T ss_dssp ECTTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEE
T ss_pred EcCCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEe
Confidence 10 000000 0 0112568999999999999987 474 8999999999988 7788888765 6 5899
Q ss_pred cCEEEEecCCChHHHHHhcCCCCCCee---eeEEEEEee-ccCCCceeeeeccCCcccccCCCCcceEEEEecCCC----
Q 009027 250 SHLIIDAMGNFSPVVKQIRSGRKPDGV---CLVVGSCAR-GFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGS---- 321 (546)
Q Consensus 250 ArlVV~ADG~~S~vr~ql~~~~~~~~~---~~~vg~~~~-~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~---- 321 (546)
|++||+|||.+|.+|++++........ ....+.... .+..... .+++ ++. ..+++| .||..+
T Consensus 158 ad~vV~AdG~~S~vR~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~--~~~------~~~~~~-~~p~~~~~~~ 227 (410)
T 3c96_A 158 ADVLVGADGIHSAVRAHLHPDQRPLSHGGITMWRGVTEFDRFLDGKT-MIVA--NDE------HWSRLV-AYPISARHAA 227 (410)
T ss_dssp ESEEEECCCTTCHHHHHHCTTCCCCEEEEEEEEEEEEEESCCTTSSE-EEEE--ECT------TCCEEE-EEECCHHHHT
T ss_pred cCEEEECCCccchhHHHhcCCCCCCCcCCeeEEEeecccccccCCCe-EEEe--cCC------CCcEEE-EEecCCcccC
Confidence 999999999999999999654321111 111011100 0101111 1111 110 123455 566542
Q ss_pred -CCccceEEEEEccC--------CCC-C-CccHHHHHHHHHHhCcc---ccccccCcceEeeeeeeeeccccCC-CCCcc
Q 009027 322 -GPLDRTTYMFTYID--------PQA-G-SPKLEELLERYWDLMPE---YQGVTLDNLEIQRVIYGIFPTYRDS-PLPAA 386 (546)
Q Consensus 322 -g~~~~~~~l~~~~~--------~~~-~-~~~l~~l~~~~~~~lp~---~~~~~l~~~~~~~~~~g~~P~~~~~-~~~~~ 386 (546)
+. ....+.+.... ... . .....++.+.|....+. +... +.... . ...+|+.... ..++.
T Consensus 228 ~g~-~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-i~~~~---~-~~~~~~~~~~~~~~~~ 301 (410)
T 3c96_A 228 EGK-SLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWDLGWFDIRDL-LTRNQ---L-ILQYPMVDRDPLPHWG 301 (410)
T ss_dssp TTC-EEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCCBTTBCHHHH-HHTCS---E-EEEEEEEECCCCSCCC
T ss_pred CCC-cEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCCCchhHHHHH-HhcCc---c-cceeecccCCCccccc
Confidence 21 11222221110 000 1 12445555443221111 1111 01111 0 1123443322 23566
Q ss_pred CCcEEEeCCCCCCCCCCCCCcchhhHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 387 FNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 387 ~~rvlLVGDAA~~v~Plsg~G~g~~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
.+||+|||||||.++|++|||+|++++|+..|++.|... + + ....|+.|+
T Consensus 302 ~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~--~--~~~~L~~Ye 351 (410)
T 3c96_A 302 RGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN---A--D--VAAALREYE 351 (410)
T ss_dssp BTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC---S--S--HHHHHHHHH
T ss_pred cCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc---C--C--HHHHHHHHH
Confidence 799999999999999999999999999999999988652 2 1 234678999
No 21
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.91 E-value=1e-23 Score=222.55 Aligned_cols=152 Identities=15% Similarity=0.191 Sum_probs=109.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCc---ccccCCH-HHHHHHHHcCCCCcccchhhhhhccCCCcc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGRE---QEWNISR-KELLELVESGILVEDDIDEATATKFNPNRC 184 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~---r~~~Is~-~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v 184 (546)
++||+||||| +|+++|+.|+++|++|+|+||.+.+... ..+.+++ ...+.|+++|+++. +... ......
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~--~~~~---~~~~~~- 99 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQT--YYDL---ALPMGV- 99 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHH--HHHH---CBCCCE-
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHH--HHHh---hcccce-
Confidence 5899999965 6999999999999999999998765421 2344543 45778999998753 2111 000000
Q ss_pred cccC--Ccccc-c--c---ccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEe
Q 009027 185 GFEG--KGEIW-V--E---DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDA 256 (546)
Q Consensus 185 ~f~~--~~~l~-~--~---~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~A 256 (546)
.+.. +..+. . + ......+++..|.+.|.+++.+ ++++.+++|+++..++++++|++.+|++++||+||+|
T Consensus 100 ~~~~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~A 177 (398)
T 2xdo_A 100 NIADEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILA 177 (398)
T ss_dssp EEECSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEEC
T ss_pred EEECCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEEC
Confidence 1111 10000 0 1 0112458999999999988753 6899999999999988899999988888999999999
Q ss_pred cCCChHHHHHhcC
Q 009027 257 MGNFSPVVKQIRS 269 (546)
Q Consensus 257 DG~~S~vr~ql~~ 269 (546)
||.+|.+|++++.
T Consensus 178 dG~~S~vR~~l~~ 190 (398)
T 2xdo_A 178 NGGMSKVRKFVTD 190 (398)
T ss_dssp SCTTCSCCTTTCC
T ss_pred CCcchhHHhhccC
Confidence 9999999998853
No 22
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.91 E-value=3.2e-22 Score=221.92 Aligned_cols=322 Identities=15% Similarity=0.103 Sum_probs=180.2
Q ss_pred cccEEEEcc-hHHHHHHHHHHhC------CCeEEEEcCCCCCCCc--ccccCCHHHHHHHHHcCCCCcc--cchhhhh-h
Q 009027 110 TFDVIVCGG-TLGIFIATALSFK------GLRVAIVERNTLKGRE--QEWNISRKELLELVESGILVED--DIDEATA-T 177 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~------G~rVlLlEr~~~~~~~--r~~~Is~~~l~~L~~lGl~~~~--~ie~~i~-~ 177 (546)
+|||||||| ++|+++|+.|+++ |++|+||||.+.++.+ ....+++..++.| ++-|... .++..+. .
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l--l~~~~~~g~~~~~~~~~~ 112 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL--FPDWKEKGAPLNTPVTED 112 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH--CTTHHHHTCCCCEECCEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH--HHHHHhcCCceeeeechh
Confidence 599999996 5699999999998 9999999999876642 2334677776655 2211100 0000000 0
Q ss_pred c--c-CC-CcccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe-EE-EEEc------CC
Q 009027 178 K--F-NP-NRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AV-LLLA------EG 245 (546)
Q Consensus 178 ~--~-~~-~~v~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~-V~~~------~g 245 (546)
. + .. ..+.+............++.+++..|.++|.+++.+.|++|+.+++|+++..++++ ++ |.+. +|
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G 192 (584)
T 2gmh_A 113 RFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKDG 192 (584)
T ss_dssp EEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTTS
T ss_pred heeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCCC
Confidence 0 0 00 00111100000001112467899999999999999999999999999999887754 43 6654 23
Q ss_pred ---------cEEEcCEEEEecCCChHHHHHh----cCCC--CCCeeeeEEEEEeeccCC--Cceeee--eccCCcccccC
Q 009027 246 ---------KILSSHLIIDAMGNFSPVVKQI----RSGR--KPDGVCLVVGSCARGFKD--NSTSDV--IYSSSSVKKVG 306 (546)
Q Consensus 246 ---------~~i~ArlVV~ADG~~S~vr~ql----~~~~--~~~~~~~~vg~~~~~~~~--~~~~~i--~~~~~~i~~~~ 306 (546)
.+++||+||+|||.+|.+++++ +... .+......+.... .++. ...+.+ .+.. +....
T Consensus 193 ~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~-~v~~~~~~~~~~~~~~g~-~~~~~- 269 (584)
T 2gmh_A 193 APKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELW-VIDEKKWKPGRVDHTVGW-PLDRH- 269 (584)
T ss_dssp CEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEE-ECCGGGCCTTEEEEEEET-TSCTT-
T ss_pred CcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhhe-ecCcccccCCeEEEEEec-cccCC-
Confidence 6899999999999999999887 4332 1212111111111 1211 011111 1111 11100
Q ss_pred CCCcceEEEEecCC--CCCccceEEEEEccCCCCCCccHHHHHHHHHHhCccccccccCcceEeeee-eeeeccccCCCC
Q 009027 307 DSEVQLFWEAFPAG--SGPLDRTTYMFTYIDPQAGSPKLEELLERYWDLMPEYQGVTLDNLEIQRVI-YGIFPTYRDSPL 383 (546)
Q Consensus 307 ~~~~~~~W~~fp~~--~g~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~-~g~~P~~~~~~~ 383 (546)
..+..| +||.. ++ ....++....+......+..+.+++|.. .|.+... ++..+..... ...++.......
T Consensus 270 --~~gg~~-~~~~~~~~~--~~~vg~~~~~~~~~~~~~~~~~l~~~~~-~p~i~~~-l~~~~~~~~~~~~~~~~~~~~~~ 342 (584)
T 2gmh_A 270 --TYGGSF-LYHLNEGEP--LLALGFVVGLDYQNPYLSPFREFQRWKH-HPSIKPT-LEGGKRIAYGARALNEGGFQSIP 342 (584)
T ss_dssp --SCEEEE-EEECCSSSC--EEEEEEEEETTCCCTTCCHHHHHHHHTT-STTTHHH-HTTCEEEEEEEEEEECCGGGGCC
T ss_pred --cCCceE-EEEecCCCC--eEEEEEEEecCcccccCChHHHHHHHHh-ChHHHHH-hCCCeEEEecceEccCCCcccCC
Confidence 112234 45654 33 1222222211111111133455555543 3444332 2222221111 112233322234
Q ss_pred CccCCcEEEeCCCCCCCCCCCCCcchhhHhhHHHHHHHHHHHHhCCC-CChhhHHHHhhhh
Q 009027 384 PAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDF-VDSYSLSLLNPYM 443 (546)
Q Consensus 384 ~~~~~rvlLVGDAA~~v~Plsg~G~g~~lrd~~~Lae~I~~Al~~g~-l~~~~l~~L~~Ye 443 (546)
++..+|++|||||||+++|++|+|+++++.|+..|++.|..+++.++ ........|+.|+
T Consensus 343 ~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~~Ye 403 (584)
T 2gmh_A 343 KLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYE 403 (584)
T ss_dssp CCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHH
T ss_pred ccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhHHHHH
Confidence 66789999999999999999999999999999999999999997653 1111100257788
No 23
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.89 E-value=5.8e-23 Score=223.81 Aligned_cols=299 Identities=12% Similarity=0.100 Sum_probs=169.6
Q ss_pred cccEEEEcch-HHHHHHHHHHh---CCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhh-----c--
Q 009027 110 TFDVIVCGGT-LGIFIATALSF---KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATAT-----K-- 178 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~---~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~-----~-- 178 (546)
.+|||||||| +|+++|+.|++ +|++|+|||+...+.......+.+.....|..+|+.+..-+...... .
T Consensus 2 ~~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~~~~~~~g~~~~~~~~~~l~~lgi~~~~~~~~~~~~~~~~~~~~ 81 (511)
T 2weu_A 2 IRSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGNVRRIGVGEATFSTVRHFFDYLGLDEREWLPRCAGGYKLGIRFE 81 (511)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC-------CCEECCTTHHHHHHHHTCCHHHHHHHTTCEEECEEEEE
T ss_pred cceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCCCCceeeccccCcchHHHHHHcCCCHHHHHHHcCCeEeccceec
Confidence 4799999976 69999999999 99999999998766543334456666778888898642101111000 0
Q ss_pred -cCC-Cc--c-ccc----------------------C----------------------Cccc----c----------cc
Q 009027 179 -FNP-NR--C-GFE----------------------G----------------------KGEI----W----------VE 195 (546)
Q Consensus 179 -~~~-~~--v-~f~----------------------~----------------------~~~l----~----------~~ 195 (546)
+.. .. + .|. + .... . ..
T Consensus 82 ~w~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 161 (511)
T 2weu_A 82 NWSEPGEYFYHPFERLRVVDGFNMAEWWLAVGDRRTSFSEACYLTHRLCEAKRAPRMLDGSLFASQVDESLGRSTLAEQR 161 (511)
T ss_dssp SSSSTTCEEEEESCCCCEETTEEHHHHHHHHC----CHHHHHCHHHHHHHTTBCSBCTTSCBCC------CCSCCGGGCC
T ss_pred CCCCCCCceEcCCCCCCCCCCCchHHHHHhccccccCcccccccccCHHHhhhhHHhHhcCCccccccccccccccccCc
Confidence 000 00 0 000 0 0000 0 00
Q ss_pred --ccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe--EEEEEcCCcEEEcCEEEEecCCChHHHH-HhcCC
Q 009027 196 --DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAEGKILSSHLIIDAMGNFSPVVK-QIRSG 270 (546)
Q Consensus 196 --~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg--v~V~~~~g~~i~ArlVV~ADG~~S~vr~-ql~~~ 270 (546)
....+.+++..|.+.|.+++.+.|++++.+ +|+++..++++ +.|++.+|++++|++||+|||.+|.+++ .++.+
T Consensus 162 ~~~~~~~~~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~ 240 (511)
T 2weu_A 162 AQFPYAYHFDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGR 240 (511)
T ss_dssp SCCSCEEEECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCC
T ss_pred CCCCeeEEEcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCC
Confidence 123467999999999999999999999999 99999886666 6677778888999999999999999854 45543
Q ss_pred C------CCCeeeeEEEEEeeccCCCc-eeeeeccCCcccccCCCCcceEEEEecCCCCCccceEEEEEccCCCCCCccH
Q 009027 271 R------KPDGVCLVVGSCARGFKDNS-TSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKL 343 (546)
Q Consensus 271 ~------~~~~~~~~vg~~~~~~~~~~-~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~l~~~~~~~~~~~~l 343 (546)
. .+...+..+ ... .+... ....... ... ..+++| .+|..+. .... +.+..........
T Consensus 241 ~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~--~~~-----~~g~~~-~~P~~~~---~~~g-~~~~~~~~~~~~~ 305 (511)
T 2weu_A 241 FQSFSDVLPNNRAVAL--RVP-RENDEDMRPYTTA--TAM-----SAGWMW-TIPLFKR---DGNG-YVYSDEFISPEEA 305 (511)
T ss_dssp EEECTTTCCCCEEEEE--EEE-CSSGGGCCSSEEE--EEE-----TTEEEE-EEECSSE---EEEE-EEECTTTSCHHHH
T ss_pred CccccccCcccceEEE--Eec-cCCCCCCCcceec--eec-----CCCcEE-EEECCCc---eEEE-EEECCCCCCHHHH
Confidence 1 111111111 111 11000 0000000 001 246778 7887642 2222 2222211111233
Q ss_pred HHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCcchhhHhhHHHHHHHHH
Q 009027 344 EELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVY 423 (546)
Q Consensus 344 ~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Plsg~G~g~~lrd~~~Lae~I~ 423 (546)
.+.+.+++...|.+ .+.. .++.+.....++..+|++|||||||.++|++|+|+++++.|+..|++.|.
T Consensus 306 ~~~l~~~~~~~~~~-----~~~~-------~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~ 373 (511)
T 2weu_A 306 ERELRSTVAPGRDD-----LEAN-------HIQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFP 373 (511)
T ss_dssp HHHHHHHHCTTCTT-----SCCE-------EEECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhCccccc-----ccce-------eEEeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhc
Confidence 33333333222211 1111 11221111224456999999999999999999999999999888887664
Q ss_pred HHHhCCCCChhhHHHHhhhh
Q 009027 424 EAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 424 ~Al~~g~l~~~~l~~L~~Ye 443 (546)
.+... -..|+.|+
T Consensus 374 ----~~~~~---~~~l~~Y~ 386 (511)
T 2weu_A 374 ----GERWD---PVLISAYN 386 (511)
T ss_dssp ----CTTCC---HHHHHHHH
T ss_pred ----cCCCC---HHHHHHHH
Confidence 22212 23456787
No 24
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.89 E-value=5.3e-23 Score=225.31 Aligned_cols=291 Identities=15% Similarity=0.164 Sum_probs=171.2
Q ss_pred cccEEEEcch-HHHHHHHHHHh------------CCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhh
Q 009027 110 TFDVIVCGGT-LGIFIATALSF------------KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATA 176 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~------------~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~ 176 (546)
.+|||||||| +|+++|+.|++ .|++|+|||+...++......+++.....|+.+|+.+..-+.+.-.
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~g~~~~p~~~~~l~~lGi~e~~~~~~~~~ 86 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGVGEGTWPSMRSTLSKIGIDENDFIRQCDA 86 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCSCEECCTHHHHHHHHHTCCHHHHHHHTTC
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcceeeechHhHHHHHHHcCCCHHHHHHHcCC
Confidence 5899999975 69999999999 9999999999877664444567888889999999975310121110
Q ss_pred h--------ccCC------C-c-------------ccccC------C--------------------------ccccccc
Q 009027 177 T--------KFNP------N-R-------------CGFEG------K--------------------------GEIWVED 196 (546)
Q Consensus 177 ~--------~~~~------~-~-------------v~f~~------~--------------------------~~l~~~~ 196 (546)
. .+.. . . +.|.. . .....+.
T Consensus 87 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~~~ 166 (526)
T 2pyx_A 87 SFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHFQN 166 (526)
T ss_dssp EEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCCSS
T ss_pred EEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCCCC
Confidence 0 0100 0 0 00100 0 0000001
Q ss_pred cccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEeCCeE--EEEEcCCcEEEcCEEEEecCCChHH-HHHhcCCCC
Q 009027 197 ILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA--VLLLAEGKILSSHLIIDAMGNFSPV-VKQIRSGRK 272 (546)
Q Consensus 197 ~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv--~V~~~~g~~i~ArlVV~ADG~~S~v-r~ql~~~~~ 272 (546)
...+.+++..|.+.|.+++.+ .|++++.+ +|+++..+++++ .|.+++|.+++|++||+|||.+|.+ ++.++....
T Consensus 167 ~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~~ 245 (526)
T 2pyx_A 167 NYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPFL 245 (526)
T ss_dssp CCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCCEE
T ss_pred CeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCcc
Confidence 123569999999999999998 89999999 699998876653 5667677789999999999999998 566664321
Q ss_pred ------CCeeeeEEEEEeeccCCCceeeeeccCCcccccCCCCcceEEEEecCCCCCccceEEEEEccCCCCCCccHHHH
Q 009027 273 ------PDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKLEEL 346 (546)
Q Consensus 273 ------~~~~~~~vg~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~l~~~~~~~~~~~~l~~l 346 (546)
+...+..+.................. .. ..+++| .+|..++ ... .+.+...........+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-----~~g~~~-~~pl~~~---~~~-~~v~~~~~~~~~~~~~~ 312 (526)
T 2pyx_A 246 SQKSVLFNDRALAIQVPYSDANSPIASCTHST---AQ-----PNGWIW-DIGLPTR---KGV-GYVYSSSHTNDIDAQKT 312 (526)
T ss_dssp ECHHHHCCCEEEEEEEECSSTTCCCCSSEEEE---EE-----TTEEEE-EEECSSE---EEE-EEEECTTTCCHHHHHHH
T ss_pred cccccccCccEEEEEeeccCCCCCCCCceeEE---ec-----CCCeEE-EeeCCCc---eEE-EEEecCCCCChHHHHHH
Confidence 01111111110000000000000000 00 246778 6787643 222 22222111111234444
Q ss_pred HHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCcchhhHhhHHHHHHHHH
Q 009027 347 LERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVY 423 (546)
Q Consensus 347 ~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Plsg~G~g~~lrd~~~Lae~I~ 423 (546)
+.+++..... . ++..+.. .++.......++..+|++|||||||.++|++|+|+++++.|+..|++.|.
T Consensus 313 l~~~l~~~~~--~--l~~~~~~-----~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~ 380 (526)
T 2pyx_A 313 LFNYLGVDGA--A--ADKLEPR-----QLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLP 380 (526)
T ss_dssp HHHHHTCCHH--H--HHHCCCE-----EEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHHhcCc--c--cccCCce-----EEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhh
Confidence 4444422110 0 1101111 12222111235567999999999999999999999999999998887654
No 25
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.89 E-value=4.8e-22 Score=218.99 Aligned_cols=301 Identities=13% Similarity=0.100 Sum_probs=174.2
Q ss_pred cccEEEEcch-HHHHHHHHHHh---CCCeEEEEcCCCCCCCcccccCCHHHHH-HHHHcCCCCcccchhhh-----hh--
Q 009027 110 TFDVIVCGGT-LGIFIATALSF---KGLRVAIVERNTLKGREQEWNISRKELL-ELVESGILVEDDIDEAT-----AT-- 177 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~---~G~rVlLlEr~~~~~~~r~~~Is~~~l~-~L~~lGl~~~~~ie~~i-----~~-- 177 (546)
.+|||||||| +|+++|+.|++ .|++|+|||+...+.......+.+.... .|+.+|+.+..-+.... ..
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~~~ 104 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAIKF 104 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCCCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCccceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEeeeE
Confidence 6899999965 69999999999 9999999999877654333467777777 88899987431121110 00
Q ss_pred -ccCCC-------------c-c---ccc--------------------CC-c-c----------cc---c---------c
Q 009027 178 -KFNPN-------------R-C---GFE--------------------GK-G-E----------IW---V---------E 195 (546)
Q Consensus 178 -~~~~~-------------~-v---~f~--------------------~~-~-~----------l~---~---------~ 195 (546)
.+... . . .|. +. . . +. . +
T Consensus 105 ~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (550)
T 2e4g_A 105 INWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGSKV 184 (550)
T ss_dssp ESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSCBC
T ss_pred eecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCCCC
Confidence 01000 0 0 000 00 0 0 00 0 0
Q ss_pred ccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEeCCe--EEEEEcCCcEEEcCEEEEecCCChHH-HHHhcCCC
Q 009027 196 DILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENA--AVLLLAEGKILSSHLIIDAMGNFSPV-VKQIRSGR 271 (546)
Q Consensus 196 ~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~dg--v~V~~~~g~~i~ArlVV~ADG~~S~v-r~ql~~~~ 271 (546)
....+.+++..|.+.|.+++.+. |++++.+ +|+++..++++ +.|.+++|++++|++||+|||.+|.+ ++.++.+.
T Consensus 185 ~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~~ 263 (550)
T 2e4g_A 185 TNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEPF 263 (550)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCCE
T ss_pred CCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCCc
Confidence 12245699999999999999998 9999999 99999886665 56777788889999999999999998 45555432
Q ss_pred C------CCeeeeEEEEEeeccCCCceeeeeccCCcccccCCCCcceEEEEecCCCCCccceEEEEEccCCCCCCccHHH
Q 009027 272 K------PDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKLEE 345 (546)
Q Consensus 272 ~------~~~~~~~vg~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~l~~~~~~~~~~~~l~~ 345 (546)
. +...+..+................. .. ...+++| .+|..+. ....+.+...........+
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~----~~~g~~~-~ipl~~~----~~~g~v~~~~~~~~~~~~~ 330 (550)
T 2e4g_A 264 LDMSDHLLNDSAVATQVPHDDDANGVEPFTSA----IA----MKSGWTW-KIPMLGR----FGTGYVYSSRFATEDEAVR 330 (550)
T ss_dssp EECTTTCCCCEEEEEEEECCHHHHCCCSSEEE----EE----CSSEEEE-EEECSSE----EEEEEEECTTTSCHHHHHH
T ss_pred ccccccccccceEEEeecccCCcccCCCceee----ee----cCCceEE-EccCCCc----cceEEEEecCCCChHHHHH
Confidence 0 1111111110000000000000000 00 0246777 6787642 2222233221111113333
Q ss_pred HHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCcchhhHhhHHHHHHHHHHH
Q 009027 346 LLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEA 425 (546)
Q Consensus 346 l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Plsg~G~g~~lrd~~~Lae~I~~A 425 (546)
.+.+++...|.+ .+... ++.......++..+|++|||||||+++|++|+|+++++.|+..|++.|.
T Consensus 331 ~l~~~~~~~p~l-----~~~~~-------i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~-- 396 (550)
T 2e4g_A 331 EFCEMWHLDPET-----QPLNR-------IRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFP-- 396 (550)
T ss_dssp HHHHHTTCCTTT-----SCCEE-------EECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCC--
T ss_pred HHHHhhCcCccc-----CCCce-------EEecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhcc--
Confidence 333333222211 11111 1111111224567999999999999999999999999999888886553
Q ss_pred HhCCCCChhhHHHHhhhh
Q 009027 426 VRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 426 l~~g~l~~~~l~~L~~Ye 443 (546)
.+... -..|+.|+
T Consensus 397 --~~~~~---~~~l~~Y~ 409 (550)
T 2e4g_A 397 --DKSLN---PVLTARFN 409 (550)
T ss_dssp --CTTCC---HHHHHHHH
T ss_pred --ccCCC---HHHHHHHH
Confidence 22212 23567787
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.87 E-value=1.5e-21 Score=214.33 Aligned_cols=284 Identities=13% Similarity=0.099 Sum_probs=167.7
Q ss_pred cccEEEEcch-HHHHHHHHHHh---CCCeEEEEcCCCCCCCcccccCCHHHHH-HHHHcCCCCcccchhhhhh-----cc
Q 009027 110 TFDVIVCGGT-LGIFIATALSF---KGLRVAIVERNTLKGREQEWNISRKELL-ELVESGILVEDDIDEATAT-----KF 179 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~---~G~rVlLlEr~~~~~~~r~~~Is~~~l~-~L~~lGl~~~~~ie~~i~~-----~~ 179 (546)
.+|||||||| +|+++|+.|++ .|++|+|||+...++.....++++.... .+..+|+.+..-+...... .+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~~~ 84 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAIKF 84 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEEEE
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCccc
Confidence 5899999965 69999999999 9999999999876654434456777777 8888898643111111000 00
Q ss_pred ---CC------CcccccCCc--------cc--------------c----------------c--------cccccceeCH
Q 009027 180 ---NP------NRCGFEGKG--------EI--------------W----------------V--------EDILNLGVSP 204 (546)
Q Consensus 180 ---~~------~~v~f~~~~--------~l--------------~----------------~--------~~~l~~~V~~ 204 (546)
.. ....++... .+ . . +....+.+++
T Consensus 85 ~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~ 164 (538)
T 2aqj_A 85 VNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHAWHFDA 164 (538)
T ss_dssp ESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCEEEECH
T ss_pred cCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCccEEEeH
Confidence 00 000000000 00 0 0 0122456999
Q ss_pred HHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe--EEEEEcCCcEEEcCEEEEecCCChHHHH-HhcCCCC-C-----Ce
Q 009027 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAEGKILSSHLIIDAMGNFSPVVK-QIRSGRK-P-----DG 275 (546)
Q Consensus 205 ~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg--v~V~~~~g~~i~ArlVV~ADG~~S~vr~-ql~~~~~-~-----~~ 275 (546)
..|.+.|.+.+.+.|++++.+ +|+++..++++ +.|.+.+|++++|++||+|||.+|.+++ .++.+.. . ..
T Consensus 165 ~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~~~~~~~ 243 (538)
T 2aqj_A 165 HLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDMSDYLLCD 243 (538)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEECTTTCCCC
T ss_pred HHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCccccccccccc
Confidence 999999999999999999999 89999886664 4677777878999999999999999854 4444310 0 01
Q ss_pred eeeEEEEEeeccCCC---ceeeeeccCCcccccCCCCcceEEEEecCCCCCccceEEEEEccCCCCCCccHHHHHHHHHH
Q 009027 276 VCLVVGSCARGFKDN---STSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDPQAGSPKLEELLERYWD 352 (546)
Q Consensus 276 ~~~~vg~~~~~~~~~---~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~ 352 (546)
.+..+ ... .... ........ .. ..+++| .+|..++ .... +.+...........+.+.+++.
T Consensus 244 ~~~~~--~~~-~~~~~~~~~~~~~~~---~~-----~~g~~~-~~p~~~~---~~~g-~v~~~~~~~~~~~~~~l~~~~~ 307 (538)
T 2aqj_A 244 SAVAS--AVP-NDDARDGVEPYTSSI---AM-----NSGWTW-KIPMLGR---FGSG-YVFSSHFTSRDQATADFLKLWG 307 (538)
T ss_dssp EEEEE--EEE-CCHHHHCCCSSEEEE---EC-----SSEEEE-EEEETTE---EEEE-EEECTTTSCHHHHHHHHHHHHT
T ss_pred eEEEE--ecc-cCCcccCCCCceeee---ec-----CCceEE-EecCCCc---eEEE-EEEcCCCCChHHHHHHHHHHhc
Confidence 11111 110 0000 00000000 00 246788 6787643 2222 2222111111233334444332
Q ss_pred hCccccccccCcceEeeeeeeeeccccCCCCCccCCcEEEeCCCCCCCCCCCCCcchhhHhhHHHHHHHHH
Q 009027 353 LMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPAAFNRILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVY 423 (546)
Q Consensus 353 ~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~~~~rvlLVGDAA~~v~Plsg~G~g~~lrd~~~Lae~I~ 423 (546)
..| +.+.. .++.......++..+|++|||||||.++|++|+|+++++.|+..|++.|.
T Consensus 308 ~~~------~~~~~-------~~~~~~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~ 365 (538)
T 2aqj_A 308 LSD------NQPLN-------QIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFP 365 (538)
T ss_dssp CCT------TCCCE-------EEECCCEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCC
T ss_pred CCC------CCCce-------EEeeccccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhh
Confidence 211 11111 12222111235667999999999999999999999999999888886553
No 27
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.84 E-value=7.3e-21 Score=199.58 Aligned_cols=288 Identities=12% Similarity=0.063 Sum_probs=155.4
Q ss_pred cEEEEcch-HHHHHHHHHHhC--CCeEEEEcCCCCCCCc-ccccCCHHHHHHHHHcCCCCcccchhhhhhcc-CCCcccc
Q 009027 112 DVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGRE-QEWNISRKELLELVESGILVEDDIDEATATKF-NPNRCGF 186 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~--G~rVlLlEr~~~~~~~-r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~-~~~~v~f 186 (546)
||+||||| +|+++|+.|+++ |++|+|+||++.++.. ....++++.+..+...+++. +..+...+ ....+.+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 77 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYL----DAPERLNPQFLEDFKL 77 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGS----SCGGGGCCEEECCEEE
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhh----hhhHHHhhccccceEE
Confidence 89999965 699999999999 9999999998876421 12233333322111122220 11011111 0001111
Q ss_pred c-CCcccccc-ccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChHHH
Q 009027 187 E-GKGEIWVE-DILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVV 264 (546)
Q Consensus 187 ~-~~~~l~~~-~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~vr 264 (546)
. .+..+... ....+.+++..|.+.|.+++.+.|++++.+++|+++... .+++|++||+|||.+|. |
T Consensus 78 ~~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S~-R 145 (381)
T 3c4a_A 78 VHHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNHK-T 145 (381)
T ss_dssp EESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGGG-T
T ss_pred EeCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCch-H
Confidence 1 11111111 111246899999999999999999999999999877421 13689999999999999 8
Q ss_pred HHhcC--CCCCCeeeeEEEEEeeccCC-CceeeeeccCCcccccCCCCcceEE-EEecCCCCCccceEEEEEccC-----
Q 009027 265 KQIRS--GRKPDGVCLVVGSCARGFKD-NSTSDVIYSSSSVKKVGDSEVQLFW-EAFPAGSGPLDRTTYMFTYID----- 335 (546)
Q Consensus 265 ~ql~~--~~~~~~~~~~vg~~~~~~~~-~~~~~i~~~~~~i~~~~~~~~~~~W-~~fp~~~g~~~~~~~l~~~~~----- 335 (546)
+++.. +...... .......+... .+.....+. .. ..+++| ..+|..++ ...+++...+
T Consensus 146 ~~l~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~-----~~g~~~~~~~p~~~~---~~~~~~~~~~~~~~~ 212 (381)
T 3c4a_A 146 AHFTEALVPQVDYG--RNKYIWYGTSQLFDQMNLVFR---TH-----GKDIFIAHAYKYSDT---MSTFIVECSEETYAR 212 (381)
T ss_dssp CCSSGGGCCCCEEE--EEEEEEEEESSCCSSEEEEEE---EE-----TTEEEEEEEEECSSS---CEEEEEEECHHHHHH
T ss_pred HhhhhhcCCCcccC--CccEEEEecCCCCCcceeeEe---eC-----CCcEEEEEEEEecCC---eEEEEEECCcccccc
Confidence 87632 1111111 11111111111 111111111 00 234444 46887654 2333332211
Q ss_pred CCC---CCccHHHHHHHHHH-hCccccccccCcceEeeeeeeeecccc-CCCCCccCCcEEEeCCCCCCCCCCCCCcchh
Q 009027 336 PQA---GSPKLEELLERYWD-LMPEYQGVTLDNLEIQRVIYGIFPTYR-DSPLPAAFNRILQFGDASGIQSPVSFGGFGS 410 (546)
Q Consensus 336 ~~~---~~~~l~~l~~~~~~-~lp~~~~~~l~~~~~~~~~~g~~P~~~-~~~~~~~~~rvlLVGDAA~~v~Plsg~G~g~ 410 (546)
... ......+.+.+++. ..|..+-. +...+ .+|.+. ....++..+||+|+|||||.++|++|||+|+
T Consensus 213 ~~~~~~~~~~~~~~l~~~~~~~~~~~~l~--~~~~~------~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ 284 (381)
T 3c4a_A 213 ARLGEMSEEASAEYVAKVFQAELGGHGLV--SQPGL------GWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTM 284 (381)
T ss_dssp TTSSSSCHHHHHHHHHHHTHHHHTTCCCB--CCTTT------CSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHH
T ss_pred CCcccCChHHHHHHHHHHhcccCCCchhh--cCCCc------ceeeeccccCCCcccCCEEEEEccccccCCCccccHHH
Confidence 000 01122222322222 22222111 11100 122221 1233567799999999999999999999999
Q ss_pred hHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 411 LTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 411 ~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
+++|+..|++.|..+ + + .-..|+.|+
T Consensus 285 al~Da~~La~~L~~~---~--~--~~~aL~~Y~ 310 (381)
T 3c4a_A 285 AVVVAQLLVKALCTE---D--G--VPAALKRFE 310 (381)
T ss_dssp HHHHHHHHHHHHHHS---S--S--HHHHHHHHH
T ss_pred HHHHHHHHHHHHhcc---c--c--HHHHHHHHH
Confidence 999999999988763 1 1 234678899
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.79 E-value=1.7e-18 Score=184.93 Aligned_cols=299 Identities=14% Similarity=0.140 Sum_probs=154.2
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCc--cc---ccCCHHHHHHHHHcCC--CCccc--chhhhhhc
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGRE--QE---WNISRKELLELVESGI--LVEDD--IDEATATK 178 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~--r~---~~Is~~~l~~L~~lGl--~~~~~--ie~~i~~~ 178 (546)
..+||+||||| +|+++|+.|+++|++|+||||.+.+... +. ..+...++..+..+|+ |.... ++......
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~ 100 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEFGYFGHYYYV 100 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHHCEEEEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhcccccceeEEE
Confidence 35899999975 6999999999999999999998743221 11 1244567777777765 32100 00000000
Q ss_pred cCCCcccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCc-eEEEEEEeCCeEEEEEcCCcEEEcCEEEEec
Q 009027 179 FNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGY-SVSSICTYENAAVLLLAEGKILSSHLIIDAM 257 (546)
Q Consensus 179 ~~~~~v~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t-~v~~i~~~~dgv~V~~~~g~~i~ArlVV~AD 257 (546)
..+..+.|.+ .+ ......|++..+...|.+++.+.|++++... .+.++ +....++++||+||
T Consensus 101 ~~~~~~~~~~--~~---~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l------------~~~~~~ad~VV~Ad 163 (430)
T 3ihm_A 101 GGPQPMRFYG--DL---KAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDL------------EGLSEQYDLLVVCT 163 (430)
T ss_dssp CSSSCEEEEE--EE---EEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGH------------HHHHTTSSEEEECC
T ss_pred CCCCccccch--hc---CCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhh------------hhhcccCCEEEECC
Confidence 0111122211 11 1234679999999999999999999887632 11111 00113689999999
Q ss_pred CCChHHHHHhcCC--CCCCe--eeeEEEEEeeccCCCceeeeeccCCcccccCCCCcceEEEEecC--CCCCccceEEEE
Q 009027 258 GNFSPVVKQIRSG--RKPDG--VCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPA--GSGPLDRTTYMF 331 (546)
Q Consensus 258 G~~S~vr~ql~~~--~~~~~--~~~~vg~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~--~~g~~~~~~~l~ 331 (546)
|.+|.++...... .+++. ..... ....++.......+.+. +. + +.+.+| .+|. .++. ...+++
T Consensus 164 G~~S~~~~~~~~~~~~~~~~p~r~~~~-~~~~g~~~~~~~~~~~~---~~--~--~~G~~~-~~p~~~~~g~--~~~~~~ 232 (430)
T 3ihm_A 164 GKYALGKVFEKQSENSPFEKPQRALCV-GLFKGIKEAPIRAVTMS---FS--P--GHGELI-EIPTLSFNGM--STALVL 232 (430)
T ss_dssp CCTTGGGGSCBCGGGCCCSSCSSEEEE-EEEESBCCCSSCCEEEE---EE--T--TTEEEE-EEEEEETTEE--EEEEEE
T ss_pred CCcchHHhccCCCCCCcccCCCeeEEE-EEEccCCCCCcCeeeee---ec--C--CCcceE-EecccCCCcc--eEEEEE
Confidence 9999876322111 11111 11111 11222221111011110 00 0 123344 3442 2221 122222
Q ss_pred EccCCCC----------CCc--cHHHHHHHHHHhCccccccccCcce--E----eee-eeeeeccccCCCCCccCCcEEE
Q 009027 332 TYIDPQA----------GSP--KLEELLERYWDLMPEYQGVTLDNLE--I----QRV-IYGIFPTYRDSPLPAAFNRILQ 392 (546)
Q Consensus 332 ~~~~~~~----------~~~--~l~~l~~~~~~~lp~~~~~~l~~~~--~----~~~-~~g~~P~~~~~~~~~~~~rvlL 392 (546)
....... ..+ .++.+.+.|....|..... +.... . ... ...++|.......++..+|++|
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l 311 (430)
T 3ihm_A 233 ENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAER-IDPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTII 311 (430)
T ss_dssp EECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTT-BCTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEEE
T ss_pred EecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHH-HhhchhccccCccceeecceeecccccccccCCCCEEE
Confidence 2211100 011 1223344444445544332 12222 0 000 1123454433233556788888
Q ss_pred -eCCCCCCCCCCCCCcchhhHhhHHHHHHHHHHHHhCCCCChhhHHHHhhhh
Q 009027 393 -FGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRGDFVDSYSLSLLNPYM 443 (546)
Q Consensus 393 -VGDAA~~v~Plsg~G~g~~lrd~~~Lae~I~~Al~~g~l~~~~l~~L~~Ye 443 (546)
+|||||.++|++|||.|++++|+..|++.|..+ +..+ ..+..|+
T Consensus 312 l~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~---~~~~----~~~~~~~ 356 (430)
T 3ihm_A 312 GLGDIQATVDPVLGQGANMASYAAWILGEEILAH---SVYD----LRFSEHL 356 (430)
T ss_dssp ECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC---SCCS----HHHHHHH
T ss_pred EecCccccCCCchhhhHHHHHHHHHHHHHHHHhc---CCHH----HHHHHHH
Confidence 999999999999999999999999999988764 3222 2456776
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.68 E-value=2.4e-16 Score=171.42 Aligned_cols=137 Identities=19% Similarity=0.124 Sum_probs=106.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
.+||+||||| +|+++|..|+++|++|+|||+.+.++..+..++++.+++.|..+|++... .. |..
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~-------~~-------~~~ 157 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFY-------GR-------FCT 157 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHC-------TT-------TTC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccc-------cc-------ccc
Confidence 6899999965 69999999999999999999998766555567888888888888864210 00 110
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEe---CCeEEEEE--c-CC--cEEEcCEEEEecCCC
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY---ENAAVLLL--A-EG--KILSSHLIIDAMGNF 260 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~---~dgv~V~~--~-~g--~~i~ArlVV~ADG~~ 260 (546)
.. ...+++..+.+.|.+.+.+.|++++.+++|+++..+ ++.+.|++ . +| .+++|++||+|||.+
T Consensus 158 -~~-------~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~ 229 (497)
T 2bry_A 158 -GT-------LDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGK 229 (497)
T ss_dssp -TT-------CCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTT
T ss_pred -cc-------cccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCC
Confidence 00 123667889999999999999999999999999864 34677776 3 55 479999999999999
Q ss_pred hHHHHHhc
Q 009027 261 SPVVKQIR 268 (546)
Q Consensus 261 S~vr~ql~ 268 (546)
|.+++..+
T Consensus 230 S~~r~~~~ 237 (497)
T 2bry_A 230 FVPEGFTI 237 (497)
T ss_dssp CCCTTCEE
T ss_pred cccccccc
Confidence 99986554
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.66 E-value=6.8e-15 Score=150.17 Aligned_cols=287 Identities=13% Similarity=0.042 Sum_probs=141.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCc-------------cc--c-cCCHHHHHHHHHcCCCCcccch
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGRE-------------QE--W-NISRKELLELVESGILVEDDID 172 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~-------------r~--~-~Is~~~l~~L~~lGl~~~~~ie 172 (546)
++||+||||| +|+++|+.|+++|++|+||||.+.++.. +. + ..++...+.+..+... .
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-- 76 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQ---G-- 76 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHH---T--
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhC---C--
Confidence 4799999965 6999999999999999999998765310 00 0 1122222222221100 0
Q ss_pred hhhhhccCCCcccccCCcccc----ccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEE
Q 009027 173 EATATKFNPNRCGFEGKGEIW----VEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKIL 248 (546)
Q Consensus 173 ~~i~~~~~~~~v~f~~~~~l~----~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i 248 (546)
....+......+... .+. ....+........ |.+.+.+ |++++.+++|+++..+++++.|++.+|+.+
T Consensus 77 --~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----l~~~l~~-g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~ 148 (336)
T 1yvv_A 77 --HVAEWTPLLYNFHAG-RLSPSPDEQVRWVGKPGMSA----ITRAMRG-DMPVSFSCRITEVFRGEEHWNLLDAEGQNH 148 (336)
T ss_dssp --SEEEECCCEEEESSS-BCCCCCTTSCEEEESSCTHH----HHHHHHT-TCCEECSCCEEEEEECSSCEEEEETTSCEE
T ss_pred --CeeeccccceeccCc-ccccCCCCCccEEcCccHHH----HHHHHHc-cCcEEecCEEEEEEEeCCEEEEEeCCCcCc
Confidence 000111100001000 000 0000000011122 2333322 889999999999999999999999888766
Q ss_pred -EcCEEEEecCCChHHHHHhcC--------CCCCCeeeeEEEEEeeccCCCceeeeeccCCcccccCCCCcceEEEE--e
Q 009027 249 -SSHLIIDAMGNFSPVVKQIRS--------GRKPDGVCLVVGSCARGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEA--F 317 (546)
Q Consensus 249 -~ArlVV~ADG~~S~vr~ql~~--------~~~~~~~~~~vg~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~--f 317 (546)
+|++||.|+|.+|.++..... ..++ ..+.++......-.......++...++ .+++|.. +
T Consensus 149 ~~a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~~~~ 219 (336)
T 1yvv_A 149 GPFSHVIIATPAPQASTLLAAAPKLASVVAGVKM-DPTWAVALAFETPLQTPMQGCFVQDSP--------LDWLARNRSK 219 (336)
T ss_dssp EEESEEEECSCHHHHGGGGTTCHHHHHHHTTCCE-EEEEEEEEEESSCCSCCCCEEEECSSS--------EEEEEEGGGS
T ss_pred cccCEEEEcCCHHHHHHhhccCHHHHHHHhhcCc-cceeEEEEEecCCCCCCCCeEEeCCCc--------eeEEEecCcC
Confidence 499999999999987754211 1122 122222111110001111222221111 1222211 2
Q ss_pred cCCCCCccceEEEEEccC-----CCC-CCc-cHHHHHHHHHHhCccccccccCcceEeeeeeeeeccccCCCCCc--cCC
Q 009027 318 PAGSGPLDRTTYMFTYID-----PQA-GSP-KLEELLERYWDLMPEYQGVTLDNLEIQRVIYGIFPTYRDSPLPA--AFN 388 (546)
Q Consensus 318 p~~~g~~~~~~~l~~~~~-----~~~-~~~-~l~~l~~~~~~~lp~~~~~~l~~~~~~~~~~g~~P~~~~~~~~~--~~~ 388 (546)
|..++ ....++..... ... +.. ...++.+.+.+.++.- ..........+..+ .+|.+....... ..+
T Consensus 220 p~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~-~~~p~~~~~~rw~~-a~~~~~~~~~~~~~~~~ 295 (336)
T 1yvv_A 220 PERDD--TLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCT-MPAPVFSLAHRWLY-ARPAGAHEWGALSDADL 295 (336)
T ss_dssp TTCCC--SSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSC-CCCCSEEEEEEEEE-EEESSCCCCSCEEETTT
T ss_pred CCCCC--CCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCC-CCCCcEEEccccCc-cCCCCCCCCCeeecCCC
Confidence 43322 11233332210 001 111 2334444444444321 00001111222222 246554322222 348
Q ss_pred cEEEeCCCCCCCCCCCCCcchhhHhhHHHHHHHHHHHHhC
Q 009027 389 RILQFGDASGIQSPVSFGGFGSLTRHLGRLSTGVYEAVRG 428 (546)
Q Consensus 389 rvlLVGDAA~~v~Plsg~G~g~~lrd~~~Lae~I~~Al~~ 428 (546)
|++|+|||+|. +|++.+++++.++++.|.+.++.
T Consensus 296 rl~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 296 GIYVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp TEEECCGGGTT------SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEEEecCCCC------CCHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999963 59999999999999998887653
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.50 E-value=7.9e-13 Score=137.41 Aligned_cols=70 Identities=23% Similarity=0.204 Sum_probs=61.1
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH-HHHHhcCC
Q 009027 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP-VVKQIRSG 270 (546)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~-vr~ql~~~ 270 (546)
..+++..+.+.|.+.+.+.|++++.+++|+++..+++++.|++.+| +++|+.||.|+|..|. +.+.++..
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~ 229 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLN 229 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCC
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCC
Confidence 4578899999999999999999999999999988888888887666 8999999999999987 77777543
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.44 E-value=1.3e-11 Score=129.18 Aligned_cols=71 Identities=8% Similarity=-0.023 Sum_probs=60.0
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe-EEEEEcCCcEEEcCEEEEecCCCh-HHHHHhcCCC
Q 009027 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNFS-PVVKQIRSGR 271 (546)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~~~g~~i~ArlVV~ADG~~S-~vr~ql~~~~ 271 (546)
..+++..+.+.|.+++.+.|++++.+++|+++..+++. +.|++.+| +++|+.||.|+|..| .+++.++...
T Consensus 169 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~ 241 (405)
T 2gag_B 169 GIAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFEL 241 (405)
T ss_dssp BBCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCC
T ss_pred ccCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCC
Confidence 45788899999999999999999999999999887665 45777667 799999999999999 5777776543
No 33
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.42 E-value=3.7e-11 Score=124.89 Aligned_cols=70 Identities=11% Similarity=0.147 Sum_probs=60.9
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEE-EEEcCCcEEEcCEEEEecCCChH-HHHHhcCC
Q 009027 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP-VVKQIRSG 270 (546)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~~g~~i~ArlVV~ADG~~S~-vr~ql~~~ 270 (546)
..+++..+.+.|.+.+.+.|++++.+++|+++..+++.++ |.+.+| +++|+.||.|+|..|. +.+.++..
T Consensus 144 ~~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 215 (382)
T 1y56_B 144 GKADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIK 215 (382)
T ss_dssp CEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCC
T ss_pred eeECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCC
Confidence 3578999999999999999999999999999998888887 887666 7999999999999994 67776644
No 34
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.37 E-value=1.6e-10 Score=125.54 Aligned_cols=203 Identities=14% Similarity=0.144 Sum_probs=112.7
Q ss_pred eeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEc---CCc--EEEcCEEEEecCCChH-HHHH-hcCCCCC
Q 009027 201 GVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGK--ILSSHLIIDAMGNFSP-VVKQ-IRSGRKP 273 (546)
Q Consensus 201 ~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~---~g~--~i~ArlVV~ADG~~S~-vr~q-l~~~~~~ 273 (546)
.+++.++...|.+.+.+.|++++.+++|+++..+++.+.|.+. +|+ +++|+.||.|+|.+|. +.++ ++.....
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~ 224 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPY 224 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCSS
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCccc
Confidence 4799999999999999999999999999999988876777763 465 7999999999999997 4544 5432111
Q ss_pred CeeeeEEEEEe--eccCCCceeeeeccCCcccccCCCCcceEEEEecCCCCCccceEEEEEccCC---CC-----CCccH
Q 009027 274 DGVCLVVGSCA--RGFKDNSTSDVIYSSSSVKKVGDSEVQLFWEAFPAGSGPLDRTTYMFTYIDP---QA-----GSPKL 343 (546)
Q Consensus 274 ~~~~~~vg~~~--~~~~~~~~~~i~~~~~~i~~~~~~~~~~~W~~fp~~~g~~~~~~~l~~~~~~---~~-----~~~~l 343 (546)
.+.++-|... ........ .+++. . + ....+| ++|..++ ...+.+.... .+ .....
T Consensus 225 -~i~p~rG~~~~~~~~~~~~~-~~~~~---~---~--dg~~~~-~~P~~~g----~~~iG~t~~~~~~~~~~~~~~~~~~ 289 (501)
T 2qcu_A 225 -GIRLIKGSHIVVPRVHTQKQ-AYILQ---N---E--DKRIVF-VIPWMDE----FSIIGTTDVEYKGDPKAVKIEESEI 289 (501)
T ss_dssp -CBCCEEEEEEEEECSSSCSC-EEEEE---C---T--TSCEEE-EEEETTT----EEEEECCCEECCSCGGGCCCCHHHH
T ss_pred -ccccceeEEEEECCCCCCce-EEEee---c---C--CCCEEE-EEEcCCC----cEEEcCCCCCCCCCcCCCCCCHHHH
Confidence 1222222211 11001000 11111 0 0 122344 5676544 2223222110 11 11244
Q ss_pred HHHHHHHHHhCc-cccccccCcceEeeeeeeeeccccCCC---CCccCCcEEE--eCCCCCCCCCCCCCcchhhHhhHHH
Q 009027 344 EELLERYWDLMP-EYQGVTLDNLEIQRVIYGIFPTYRDSP---LPAAFNRILQ--FGDASGIQSPVSFGGFGSLTRHLGR 417 (546)
Q Consensus 344 ~~l~~~~~~~lp-~~~~~~l~~~~~~~~~~g~~P~~~~~~---~~~~~~rvlL--VGDAA~~v~Plsg~G~g~~lrd~~~ 417 (546)
+.+++...+.+| .+.. ..+.....|..|...... .+...+.++. .+|..+.+-.++|+|+-. ...
T Consensus 290 ~~l~~~~~~~~p~~l~~-----~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~----~~~ 360 (501)
T 2qcu_A 290 NYLLNVYNTHFKKQLSR-----DDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTT----YRK 360 (501)
T ss_dssp HHHHHHHHHHBSSCCCG-----GGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGG----HHH
T ss_pred HHHHHHHHHhcCCCCCc-----ccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccc----hHH
Confidence 555555556677 4432 222333446777764321 1334566776 677666667777776432 234
Q ss_pred HHHHHHHHHh
Q 009027 418 LSTGVYEAVR 427 (546)
Q Consensus 418 Lae~I~~Al~ 427 (546)
+|+.+.+.+.
T Consensus 361 ~Ae~~~~~~~ 370 (501)
T 2qcu_A 361 LAEHALEKLT 370 (501)
T ss_dssp HHHHHHHHHG
T ss_pred HHHHHHHHHH
Confidence 5665555554
No 35
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.31 E-value=3.6e-11 Score=123.48 Aligned_cols=71 Identities=17% Similarity=0.086 Sum_probs=61.7
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe-EEEEEcCC--cEEEcCEEEEecCCChH-HHHHh-cCC
Q 009027 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEG--KILSSHLIIDAMGNFSP-VVKQI-RSG 270 (546)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~~~g--~~i~ArlVV~ADG~~S~-vr~ql-~~~ 270 (546)
..+++..+.+.|.+.+++.|++++++++|+++..++++ +.|.+.+| .+++|+.||.|+|.+|. +.+++ +..
T Consensus 145 ~~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred EEECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 35889999999999999999999999999999988776 88888777 48999999999999994 77777 653
No 36
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.27 E-value=5.9e-11 Score=125.99 Aligned_cols=63 Identities=14% Similarity=0.100 Sum_probs=57.9
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCc---eEEEEEEeCCeEE-EEEcCCcEEEcCEEEEecCCChH
Q 009027 200 LGVSPAKLIEIVKKRFISLGGVIFEGY---SVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t---~v~~i~~~~dgv~-V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
..+++..+.+.|.+++++.|+++++++ +|+++..++++++ |.+.+|++++|+.||.|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 457888999999999999999999999 9999999888888 99888888999999999999986
No 37
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.27 E-value=3.3e-11 Score=128.09 Aligned_cols=150 Identities=15% Similarity=0.206 Sum_probs=96.1
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcc------cccCC-----HH---------HHHHHHHcCCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQ------EWNIS-----RK---------ELLELVESGILV 167 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r------~~~Is-----~~---------~l~~L~~lGl~~ 167 (546)
.+||||||||| +|+++|+.|+++|++|+||||.+.++.+- ..+++ .. ....+......
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~- 104 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQ- 104 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHH-
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHH-
Confidence 36999999965 69999999999999999999998754210 00000 00 00001000000
Q ss_pred cccchhhhhhccCCCcccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcE
Q 009027 168 EDDIDEATATKFNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKI 247 (546)
Q Consensus 168 ~~~ie~~i~~~~~~~~v~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~ 247 (546)
++..... .. .+.+.... ....+ ...++..+.+.|.+++.+.|++++.+++|+++..+++++.|++.+| +
T Consensus 105 --~~~~~~~-~~---Gi~~~~~~---~g~~~-~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~ 173 (417)
T 3v76_A 105 --DFVALVE-RH---GIGWHEKT---LGQLF-CDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-T 173 (417)
T ss_dssp --HHHHHHH-HT---TCCEEECS---TTEEE-ESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-E
T ss_pred --HHHHHHH-Hc---CCCcEEee---CCEEe-eCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-E
Confidence 0000000 00 00000000 00001 1246778999999999999999999999999999999999998777 8
Q ss_pred EEcCEEEEecCCCh-----------HHHHHhcCC
Q 009027 248 LSSHLIIDAMGNFS-----------PVVKQIRSG 270 (546)
Q Consensus 248 i~ArlVV~ADG~~S-----------~vr~ql~~~ 270 (546)
++|+.||.|+|..| .++++++..
T Consensus 174 i~ad~VIlAtG~~S~p~~gs~g~g~~la~~~G~~ 207 (417)
T 3v76_A 174 VDAASLVVASGGKSIPKMGATGLAYRIAEQFGLP 207 (417)
T ss_dssp EEESEEEECCCCSSCGGGTCCCHHHHHHHHTTCC
T ss_pred EEeeEEEECCCCccCCCCCCCcHHHHHHHHCCCC
Confidence 99999999999999 577777654
No 38
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.27 E-value=7.3e-11 Score=123.50 Aligned_cols=68 Identities=9% Similarity=0.180 Sum_probs=59.4
Q ss_pred eeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh-HHHHHhcC
Q 009027 201 GVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS-PVVKQIRS 269 (546)
Q Consensus 201 ~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S-~vr~ql~~ 269 (546)
.+++..+.+.|.+.+.+.|++++.+++|+++..++++++|.+.++ +++|+.||.|+|.+| .++++++.
T Consensus 149 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~ 217 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEPLGA 217 (397)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGGGTC
T ss_pred EEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhhcCC
Confidence 578889999999999999999999999999999888888887555 799999999999995 47777764
No 39
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.25 E-value=2.2e-11 Score=130.29 Aligned_cols=158 Identities=19% Similarity=0.204 Sum_probs=97.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcc-----c-ccCCH-HHH-HHHHHcCCCCcccchhhhhhccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQ-----E-WNISR-KEL-LELVESGILVEDDIDEATATKFN 180 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r-----~-~~Is~-~~l-~~L~~lGl~~~~~ie~~i~~~~~ 180 (546)
+||||||||| +|+++|+.|+++|++|+||||.+.++.+- . .+++. ... +.+..++.... -+...+ ..+.
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~ 103 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGR-FLYSAF-SIFN 103 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGG-GGHHHH-HHSC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChH-HHHHHH-HhcC
Confidence 6999999965 69999999999999999999987654210 0 01100 000 11122211000 000000 0000
Q ss_pred CC-ccccc-C-Cccccccccccce----eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe-EEEEEcCCcEEEcCE
Q 009027 181 PN-RCGFE-G-KGEIWVEDILNLG----VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHL 252 (546)
Q Consensus 181 ~~-~v~f~-~-~~~l~~~~~l~~~----V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~~~g~~i~Arl 252 (546)
.. .+.+. . +.++.. ...+.. -....+.+.|.+++.+.|++++.+++|+++..+++. +.|.+.+|++++|+.
T Consensus 104 ~~~~~~~~~~~G~~~~~-~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~i~Ad~ 182 (447)
T 2i0z_A 104 NEDIITFFENLGVKLKE-EDHGRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEVLETNH 182 (447)
T ss_dssp HHHHHHHHHHTTCCEEE-CGGGEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCEEECSC
T ss_pred HHHHHHHHHhcCCceEE-eeCCEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCEEECCE
Confidence 00 00000 0 000000 001111 136788899999999999999999999999888777 678887887899999
Q ss_pred EEEecCCCh-----------HHHHHhcCC
Q 009027 253 IIDAMGNFS-----------PVVKQIRSG 270 (546)
Q Consensus 253 VV~ADG~~S-----------~vr~ql~~~ 270 (546)
||.|+|..| .++++++..
T Consensus 183 VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 183 VVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp EEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred EEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 999999999 899888764
No 40
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.25 E-value=9.5e-11 Score=128.52 Aligned_cols=60 Identities=22% Similarity=0.319 Sum_probs=52.7
Q ss_pred CHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEE-EEEcCCcEEEcCEEEEecCCChH
Q 009027 203 SPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 203 ~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
....+.+.|.+.+.+.|++++++++|+++..+++.+. |++.+|++++|++||.|+|+.|.
T Consensus 218 ~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 218 KLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCEEECSCEEECCCTTCH
T ss_pred hHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChh
Confidence 3567888899999999999999999999988877654 88888889999999999999995
No 41
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.20 E-value=2.7e-09 Score=117.49 Aligned_cols=70 Identities=17% Similarity=0.239 Sum_probs=58.5
Q ss_pred eeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEE-EEEcC---C--cEEEcCEEEEecCCCh-HHHHHhcCC
Q 009027 201 GVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAE---G--KILSSHLIIDAMGNFS-PVVKQIRSG 270 (546)
Q Consensus 201 ~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~~---g--~~i~ArlVV~ADG~~S-~vr~ql~~~ 270 (546)
.+++.++...|.+.+.+.|++++.+++|+++..+++++. |.+.+ | .+++|+.||.|+|.+| .+++.++..
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 588999999999999999999999999999999888653 65543 3 3799999999999999 467666543
No 42
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.18 E-value=1.2e-10 Score=131.11 Aligned_cols=63 Identities=17% Similarity=0.171 Sum_probs=58.4
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH
Q 009027 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
..+++..+.+.|.+++.+.|++++.+++|+++..++++|.|++.+|.+++|+.||.|+|..|.
T Consensus 412 g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 412 GWLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQIS 474 (676)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGG
T ss_pred eeeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchh
Confidence 457899999999999999999999999999999999999999888788999999999999986
No 43
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.17 E-value=3.4e-10 Score=116.97 Aligned_cols=70 Identities=10% Similarity=0.090 Sum_probs=62.1
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH-HHHHhcCC
Q 009027 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP-VVKQIRSG 270 (546)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~-vr~ql~~~ 270 (546)
..+++..+.+.|.+.+++.|++++++++|+++..+++++.|++.+| +++|+.||.|+|.+|. +.+.++..
T Consensus 149 ~~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 149 ADIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred ceECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCC
Confidence 3589999999999999999999999999999999999988888766 8999999999999995 67777653
No 44
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.16 E-value=2.3e-10 Score=118.83 Aligned_cols=67 Identities=12% Similarity=0.188 Sum_probs=57.7
Q ss_pred eeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH-HHHHhc
Q 009027 201 GVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP-VVKQIR 268 (546)
Q Consensus 201 ~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~-vr~ql~ 268 (546)
.+++..+.+.|.+++.+.|++++.+++|+++..+++++.|+++++ +++|+.||.|+|..|. +...++
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 146 VLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGGT
T ss_pred EEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhhc
Confidence 477889999999999999999999999999998888888887655 7999999999999986 444444
No 45
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.16 E-value=2.8e-10 Score=117.65 Aligned_cols=62 Identities=13% Similarity=0.061 Sum_probs=55.1
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH
Q 009027 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
..+++..+.+.|.+.+.+.|++++.+++|+++..+++++.|++.+| +++|+.||.|+|..|.
T Consensus 144 g~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 144 GFLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGG
T ss_pred cEEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHH
Confidence 3478889999999999999999999999999998888888888666 5999999999999874
No 46
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.15 E-value=4.5e-10 Score=104.39 Aligned_cols=117 Identities=18% Similarity=0.224 Sum_probs=89.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
+|||+||||| +|+.+|..|++.|.+|+|+|+.+..- .+. ..+. .+ .+
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~-~~~-------------------~~~~-----~~-------~~ 48 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKV-KGV-------------------SRVP-----NY-------PG 48 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTT-TTC-------------------SCCC-----CS-------TT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcc-cCc-------------------hhhh-----cc-------CC
Confidence 3899999965 69999999999999999999876110 000 0000 00 00
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChHHHHHhc
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVVKQIR 268 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~vr~ql~ 268 (546)
.+ ..++...+.+.+.+.+.+.|++++.+ +++++..+++++.|++++| +++|+.||.|+|..|.+++.++
T Consensus 49 -----~~----~~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~~~g 117 (180)
T 2ywl_A 49 -----LL----DEPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLPSLLG 117 (180)
T ss_dssp -----CT----TCCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHHHHHT
T ss_pred -----Cc----CCCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCccccCC
Confidence 00 12456778889999999999999999 9999988888888888778 8999999999999998887775
Q ss_pred C
Q 009027 269 S 269 (546)
Q Consensus 269 ~ 269 (546)
+
T Consensus 118 ~ 118 (180)
T 2ywl_A 118 L 118 (180)
T ss_dssp C
T ss_pred C
Confidence 4
No 47
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.14 E-value=1.4e-10 Score=119.74 Aligned_cols=131 Identities=21% Similarity=0.311 Sum_probs=87.2
Q ss_pred cccEEEEcc-hHHHHHHHHHHhC--CCeEEEEcCCCCCCCcccc---------cCCHHHHHHHHHcCCCCcccchhhhhh
Q 009027 110 TFDVIVCGG-TLGIFIATALSFK--GLRVAIVERNTLKGREQEW---------NISRKELLELVESGILVEDDIDEATAT 177 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~--G~rVlLlEr~~~~~~~r~~---------~Is~~~l~~L~~lGl~~~~~ie~~i~~ 177 (546)
+|||||||| ++|+++|+.|+++ |++|+|||+...++.. .| .+.+...+.|.++|+.-.
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg-~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~--------- 148 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGG-AWLGGQLFSAMVMRKPADVFLDEVGVPYE--------- 148 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTT-TTCCBTTCCCEEEETTTHHHHHHHTCCCE---------
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCc-cccCCccchhhhcchHHHHHHHHcCCccc---------
Confidence 599999996 4699999999997 9999999998765421 11 111223444555554210
Q ss_pred ccCCCcccccCCccccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEeCC--------------------
Q 009027 178 KFNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYEN-------------------- 236 (546)
Q Consensus 178 ~~~~~~v~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~d-------------------- 236 (546)
....+. ...+...+.+.|.+++.+ .|++++.++.++++..+++
T Consensus 149 ----------~~G~~~------~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~r 212 (344)
T 3jsk_A 149 ----------DEGDYV------VVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVR 212 (344)
T ss_dssp ----------ECSSEE------EESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEE
T ss_pred ----------ccCCeE------EEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCce
Confidence 000000 111345677888998888 5899999999999987663
Q ss_pred --eEEEEE----c--------CCcEEEcCEEEEecCCChHHHHH
Q 009027 237 --AAVLLL----A--------EGKILSSHLIIDAMGNFSPVVKQ 266 (546)
Q Consensus 237 --gv~V~~----~--------~g~~i~ArlVV~ADG~~S~vr~q 266 (546)
++++.. . ++.+|+|++||+|+|+.|++++.
T Consensus 213 V~GVv~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~~ 256 (344)
T 3jsk_A 213 IAGVVTNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGAF 256 (344)
T ss_dssp EEEEEEEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSCH
T ss_pred EeEEEeeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhHH
Confidence 222321 1 12479999999999999996543
No 48
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.13 E-value=2.7e-10 Score=128.53 Aligned_cols=63 Identities=13% Similarity=0.051 Sum_probs=57.0
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCc-EEEcCEEEEecCCChH
Q 009027 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK-ILSSHLIIDAMGNFSP 262 (546)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~-~i~ArlVV~ADG~~S~ 262 (546)
..+++..+.+.|.+.+.+.|++++.+++|+++..+++++.|.+.+|. +++|+.||.|+|..|.
T Consensus 407 g~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLP 470 (689)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTT
T ss_pred eEECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchh
Confidence 35789999999999999999999999999999999889999887776 8999999999999986
No 49
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.11 E-value=3.5e-10 Score=113.70 Aligned_cols=131 Identities=18% Similarity=0.323 Sum_probs=87.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhC-CCeEEEEcCCCCCCCccccc---------CCHHHHHHHHHcCCCCcccchhhhhhc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFK-GLRVAIVERNTLKGREQEWN---------ISRKELLELVESGILVEDDIDEATATK 178 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~-G~rVlLlEr~~~~~~~r~~~---------Is~~~l~~L~~lGl~~~~~ie~~i~~~ 178 (546)
+|||+||||| +|+++|..|+++ |++|+||||.+.++.. .|. +.....+.|.++|+.
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~-~~~~~~~~~~~~~~~~~~~~l~~~G~~------------ 105 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGG-AWLGGQLFSAMIVRKPAHLFLDEIGVA------------ 105 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTT-TTCCSTTCCCEEEETTTHHHHHHHTCC------------
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCc-eecCCcchHHHHcCcHHHHHHHHcCCC------------
Confidence 5899999965 699999999997 9999999998765421 110 001112223333321
Q ss_pred cCCCcccccCCccccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEeCCeE-EEEEc---------CC--
Q 009027 179 FNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLA---------EG-- 245 (546)
Q Consensus 179 ~~~~~v~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv-~V~~~---------~g-- 245 (546)
|... ..+....+...+...|.+++.+ .|++++.+++|+++..+++.+ .|.+. ++
T Consensus 106 -------~~~~------~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~ 172 (284)
T 1rp0_A 106 -------YDEQ------DTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSC 172 (284)
T ss_dssp -------CEEC------SSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSC
T ss_pred -------cccC------CCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCcccc
Confidence 1000 0000122567788888888876 699999999999999887754 23331 22
Q ss_pred ---cEEEcCEEEEecCCChHHHHH
Q 009027 246 ---KILSSHLIIDAMGNFSPVVKQ 266 (546)
Q Consensus 246 ---~~i~ArlVV~ADG~~S~vr~q 266 (546)
.+++|+.||.|+|.+|.++..
T Consensus 173 g~~~~i~ad~VV~AtG~~s~~~~~ 196 (284)
T 1rp0_A 173 MDPNVMEAKIVVSSCGHDGPFGAT 196 (284)
T ss_dssp CCCEEEEEEEEEECCCSSSTTTTH
T ss_pred CceEEEECCEEEECCCCchHHHHH
Confidence 579999999999999977643
No 50
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.11 E-value=1.2e-10 Score=122.86 Aligned_cols=71 Identities=14% Similarity=0.200 Sum_probs=55.1
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEE---------EEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh-HHHH-Hhc
Q 009027 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVS---------SICTYENAAVLLLAEGKILSSHLIIDAMGNFS-PVVK-QIR 268 (546)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~---------~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S-~vr~-ql~ 268 (546)
..+++..+.+.|.+++.+.|++++++++|+ ++..+++.+.|.+.+| +++|+.||.|+|.+| .+++ +++
T Consensus 167 g~v~~~~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~~~~g 245 (405)
T 3c4n_A 167 LTYRPGSLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVEQGLG 245 (405)
T ss_dssp EEECHHHHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHHHHHC
T ss_pred EEEcHHHHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHHHhcC
Confidence 357899999999999999999999999999 8877777776666555 799999999999999 6887 776
Q ss_pred CCC
Q 009027 269 SGR 271 (546)
Q Consensus 269 ~~~ 271 (546)
...
T Consensus 246 ~~~ 248 (405)
T 3c4n_A 246 LHT 248 (405)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 51
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.10 E-value=5.8e-10 Score=117.82 Aligned_cols=156 Identities=17% Similarity=0.182 Sum_probs=92.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCC-----C-ccc-chhhhhhccCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGIL-----V-EDD-IDEATATKFNP 181 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~-----~-~~~-ie~~i~~~~~~ 181 (546)
+||||||||| +|+++|+.|+++|++|+||||.+.++.+ +.++.+....+...+.. . ..+ +...+ ..+..
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~--~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l-~~~~~ 80 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRK--ILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSAL-ARYTN 80 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHH--HHHGGGGTCCCEESSCCGGGEECSCTTSTHHHH-HHSCH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchh--cEEcCCCeEEccCCccCHHHhccCCHHHHHHHH-HhCCH
Confidence 5899999965 6999999999999999999998765421 00000000000000000 0 000 00000 00000
Q ss_pred C-ccccc-C-Ccccccccccccee---CHHHHHHHHHHHHHhcCCEEEeCceEEEEEEe----CCeEEEEEcCCcEEEcC
Q 009027 182 N-RCGFE-G-KGEIWVEDILNLGV---SPAKLIEIVKKRFISLGGVIFEGYSVSSICTY----ENAAVLLLAEGKILSSH 251 (546)
Q Consensus 182 ~-~v~f~-~-~~~l~~~~~l~~~V---~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~----~dgv~V~~~~g~~i~Ar 251 (546)
. .+.+. . +-+.... ..+..+ ++..+.+.|.+.+.+.|++++.+++|+++..+ ++++.|++.++ +++|+
T Consensus 81 ~~~~~~~~~~Gi~~~~~-~~g~~~p~~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~i~ad 158 (401)
T 2gqf_A 81 WDFISLVAEQGITYHEK-ELGQLFCDEGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-QWQCK 158 (401)
T ss_dssp HHHHHHHHHTTCCEEEC-STTEEEETTCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-EEEES
T ss_pred HHHHHHHHhCCCceEEC-cCCEEccCCCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-EEECC
Confidence 0 00000 0 0000000 001111 56778889999999999999999999999876 56788887666 79999
Q ss_pred EEEEecCCCh-----------HHHHHhcCC
Q 009027 252 LIIDAMGNFS-----------PVVKQIRSG 270 (546)
Q Consensus 252 lVV~ADG~~S-----------~vr~ql~~~ 270 (546)
.||.|+|..| .++++++..
T Consensus 159 ~VVlAtG~~s~p~~g~~G~g~~la~~~G~~ 188 (401)
T 2gqf_A 159 NLIVATGGLSMPGLGATPFGYQIAEQFGIP 188 (401)
T ss_dssp EEEECCCCSSCGGGTCCSHHHHHHHHTTCC
T ss_pred EEEECCCCccCCCCCCChHHHHHHHHCCCC
Confidence 9999999999 677887654
No 52
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.03 E-value=6.1e-08 Score=92.26 Aligned_cols=36 Identities=25% Similarity=0.403 Sum_probs=32.6
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCC
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKG 145 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~ 145 (546)
++||+|||| |+|+++|+.|+++|++|+|+||.+.++
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCC
Confidence 589999995 679999999999999999999988764
No 53
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.02 E-value=2.7e-09 Score=108.77 Aligned_cols=128 Identities=15% Similarity=0.184 Sum_probs=89.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCc-cccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNR-CGFE 187 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~-v~f~ 187 (546)
+|||+||||| +|+++|..|+++|++|+|+|+.+.++. .|.- .++...+. .+.. ..+.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg--~~~~------------~~~~~~~~-------~~~~~~~~~ 61 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGG--AWQH------------AWHSLHLF-------SPAGWSSIP 61 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSG--GGGG------------SCTTCBCS-------SCGGGSCCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCC--cccC------------CCCCcEec-------CchhhhhCC
Confidence 5899999965 699999999999999999999876542 1210 01100000 0000 0011
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEE-EEEcCCcEEEcCEEEEecCCChH
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
+. ..+.......++..+.+.|.+.+.+.|++++.+++|+++..+++.+. |++.++ +++++.||.|+|.+|.
T Consensus 62 ~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 62 GW---PMPASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp SS---CCCCCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred CC---CCCCCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 00 00011111245678889999999999999999999999999999998 888777 8999999999998773
No 54
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.01 E-value=2.2e-09 Score=118.22 Aligned_cols=153 Identities=14% Similarity=0.164 Sum_probs=91.6
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcc-----cccCCHHHHHHHHHcCCCCccc------------
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQ-----EWNISRKELLELVESGILVEDD------------ 170 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r-----~~~Is~~~l~~L~~lGl~~~~~------------ 170 (546)
.++|||||||| +|+++|+.|+++|++|+||||.+.++..- ..+.... .....+|+.+..+
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~--~~~~~~g~~ds~~~~~~~~~~~~~~ 197 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGT--KQQTAHGVEDKVEWFIEDAMKGGRQ 197 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSC--HHHHHTTCCCCHHHHHHHHHHHTTT
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCC--HHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 36899999965 69999999999999999999998765321 1111100 1122333322100
Q ss_pred ------chhhhh-----hcc-CCCccccc-----CCcc---ccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEE
Q 009027 171 ------IDEATA-----TKF-NPNRCGFE-----GKGE---IWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSS 230 (546)
Q Consensus 171 ------ie~~i~-----~~~-~~~~v~f~-----~~~~---l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~ 230 (546)
++.... .++ ....+.|. +... .+.+ .+-.+....+.+.|.+++.+.|++++.+++|++
T Consensus 198 ~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~--~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~ 275 (566)
T 1qo8_A 198 QNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRP--HGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVVK 275 (566)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEEC--SSSSCHHHHHHHHHHHHHHHTTCCEECSEEEEE
T ss_pred CCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeec--CCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEEE
Confidence 000000 000 00001110 0000 0000 011134678889999999999999999999999
Q ss_pred EEEeC-CeE---EEEEcCCc--EEEcCEEEEecCCChHHHH
Q 009027 231 ICTYE-NAA---VLLLAEGK--ILSSHLIIDAMGNFSPVVK 265 (546)
Q Consensus 231 i~~~~-dgv---~V~~~~g~--~i~ArlVV~ADG~~S~vr~ 265 (546)
+..++ +.+ ++...+|+ +++|+.||.|+|..|..++
T Consensus 276 l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~ 316 (566)
T 1qo8_A 276 LVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKE 316 (566)
T ss_dssp EEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHH
T ss_pred EEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHH
Confidence 98877 543 33333665 7999999999999997644
No 55
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.97 E-value=2.2e-09 Score=110.06 Aligned_cols=132 Identities=22% Similarity=0.321 Sum_probs=86.1
Q ss_pred cccEEEEcc-hHHHHHHHHHHhC--CCeEEEEcCCCCCCCcccc---------cCCHHHHHHHHHcCCCCcccchhhhhh
Q 009027 110 TFDVIVCGG-TLGIFIATALSFK--GLRVAIVERNTLKGREQEW---------NISRKELLELVESGILVEDDIDEATAT 177 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~--G~rVlLlEr~~~~~~~r~~---------~Is~~~l~~L~~lGl~~~~~ie~~i~~ 177 (546)
+|||+|||| ++|+++|..|+++ |++|+|+|+...++.. .| .+.......|.++|+.-
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg-~~~~g~~~~~~~~~~~~~~~L~~~Gv~~---------- 133 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGG-SWLGGQLFSAMVMRKPAHLFLQELEIPY---------- 133 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTT-TTCCGGGCCCEEEETTTHHHHHHTTCCC----------
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCcccccc-ccccCcccchhhhhhHHHHHHHhhCccc----------
Confidence 689999996 5699999999998 9999999998876521 11 01112233333444321
Q ss_pred ccCCCcccccCCccccccccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEeC--C-------eEEEEEc----
Q 009027 178 KFNPNRCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYE--N-------AAVLLLA---- 243 (546)
Q Consensus 178 ~~~~~~v~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~--d-------gv~V~~~---- 243 (546)
..... +....+...+.+.|.+++.+. |++++.+++|+++..++ + ++++...
T Consensus 134 ---------~~~g~------~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~ 198 (326)
T 2gjc_A 134 ---------EDEGD------YVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQ 198 (326)
T ss_dssp ---------EECSS------EEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHT
T ss_pred ---------ccCCC------eEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecc
Confidence 00000 111124567788899988885 88999999999998763 2 2333211
Q ss_pred --------CCcEEEc---------------CEEEEecCCChHHHHHh
Q 009027 244 --------EGKILSS---------------HLIIDAMGNFSPVVKQI 267 (546)
Q Consensus 244 --------~g~~i~A---------------rlVV~ADG~~S~vr~ql 267 (546)
++.++.| ++||+|+|+.|++.+.+
T Consensus 199 ~g~~~~~~d~~~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~ 245 (326)
T 2gjc_A 199 AHGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFC 245 (326)
T ss_dssp C---CCCCCCEEEEESCCCSSSCCCSSTTCCEEEECCCCC--CCSHH
T ss_pred cccceeccCceEEEEeeccccccccccccCCEEEECcCCCchHHHHH
Confidence 2357999 99999999999888655
No 56
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.97 E-value=5e-09 Score=105.42 Aligned_cols=113 Identities=19% Similarity=0.269 Sum_probs=84.3
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCC-eEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGL-RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~-rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
+|||+|||| ++|+++|..|+++|+ +|+|+|+....+. |..+ . .+ .. +.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~~gg~---~~~~----------~-----~~-----~~-------~~ 50 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGMPGGQ---ITGS----------S-----EI-----EN-------YP 50 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSSTTCG---GGGC----------S-----CB-----CC-------ST
T ss_pred CceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCCCCcc---cccc----------c-----cc-----cc-------CC
Confidence 389999996 569999999999999 9999999643221 1000 0 00 00 00
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
+ +...+++..+.+.+.+.+.+.|++++. ++++++..+++.+.|.+.++++++++.||.|+|..+.
T Consensus 51 ~---------~~~~~~~~~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~ 115 (311)
T 2q0l_A 51 G---------VKEVVSGLDFMQPWQEQCFRFGLKHEM-TAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPK 115 (311)
T ss_dssp T---------CCSCBCHHHHHHHHHHHHHTTSCEEEC-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEEC
T ss_pred C---------CcccCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCC
Confidence 0 112356778888888888888999988 7899999888888888888889999999999997663
No 57
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=98.97 E-value=5.3e-09 Score=101.76 Aligned_cols=125 Identities=14% Similarity=0.053 Sum_probs=85.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC-CCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL-KGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~-~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
+|||+||||| +|+.+|..|+++|++|+|||+... .+ .+ ..+ .++-+.. ..+ ..++ .
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G---~~-~~~-------~~~~~~~---~~~-~~~~-------~ 60 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM---MP-FLP-------PKPPFPP---GSL-LERA-------Y 60 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT---CC-SSC-------CCSCCCT---TCH-HHHH-------C
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC---cc-cCc-------cccccch---hhH-Hhhh-------c
Confidence 5899999965 699999999999999999999732 11 00 000 0000000 000 0000 0
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEeCCeE-EEEEcCCcEEEcCEEEEecCCChHHHH
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSPVVK 265 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~dgv-~V~~~~g~~i~ArlVV~ADG~~S~vr~ 265 (546)
. ..+ -++..+.+.|.+.+.+. |++++ +++|+++..+++.+ .|.+.+|++++|+.||.|+|.+|..+.
T Consensus 61 d--------~~g--~~~~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~ 129 (232)
T 2cul_A 61 D--------PKD--ERVWAFHARAKYLLEGLRPLHLF-QATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARL 129 (232)
T ss_dssp C--------TTC--CCHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEE
T ss_pred c--------CCC--CCHHHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhce
Confidence 0 001 16778899999999887 88888 57999998888775 477777878999999999999886654
Q ss_pred Hh
Q 009027 266 QI 267 (546)
Q Consensus 266 ql 267 (546)
.+
T Consensus 130 ~~ 131 (232)
T 2cul_A 130 FL 131 (232)
T ss_dssp EE
T ss_pred ec
Confidence 43
No 58
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.96 E-value=6.5e-09 Score=119.65 Aligned_cols=69 Identities=17% Similarity=0.188 Sum_probs=58.3
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeE-EEEEcCCcEEEcCEEEEecCCChHH-HHHhcC
Q 009027 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSPV-VKQIRS 269 (546)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~~g~~i~ArlVV~ADG~~S~v-r~ql~~ 269 (546)
..+++..+.+.|.+.+.+.|++++++++|+++..+++++ .|.+.+| +++|+.||.|+|..|.. .+.++.
T Consensus 146 g~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~~l~~~~g~ 216 (830)
T 1pj5_A 146 GLASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGAKIGAMIGM 216 (830)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHHHHHHTTTC
T ss_pred ceEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchHHHHHHhCC
Confidence 357899999999999999999999999999999888876 4677666 79999999999999963 444544
No 59
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.95 E-value=7.1e-09 Score=114.27 Aligned_cols=150 Identities=13% Similarity=0.132 Sum_probs=88.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcc-----cccCCHHHHHHHHHcCCCCccc-------------
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQ-----EWNISRKELLELVESGILVEDD------------- 170 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r-----~~~Is~~~l~~L~~lGl~~~~~------------- 170 (546)
++|||||||| +|+++|+.|+++|++|+||||.+.++..- ..+.... .....+|+.+..+
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~--~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWT--DQQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSC--HHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCC--HHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 6899999965 69999999999999999999998765321 1111110 1122333321100
Q ss_pred -----chhhhh-----hcc-CCCccccc-----CCcc---ccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEE
Q 009027 171 -----IDEATA-----TKF-NPNRCGFE-----GKGE---IWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSI 231 (546)
Q Consensus 171 -----ie~~i~-----~~~-~~~~v~f~-----~~~~---l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i 231 (546)
++.+.. .++ ....+.|. ++.. .+.+. .-......+.+.|.+++.+.|++++.+++|+++
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~--~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~~l 281 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPT--GGAGVGAHVVQVLYDNAVKRNIDLRMNTRGIEV 281 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEEST--TTCCHHHHHHHHHHHHHHHTTCEEESSEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecC--CCCCCHHHHHHHHHHHHHhcCCEEEeCCEeeEe
Confidence 000000 000 00001110 0000 00000 001335678899999999999999999999999
Q ss_pred EEeC-CeE---EEEEcCCc--EEEcCEEEEecCCChHH
Q 009027 232 CTYE-NAA---VLLLAEGK--ILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 232 ~~~~-dgv---~V~~~~g~--~i~ArlVV~ADG~~S~v 263 (546)
..++ +.+ ++...+|+ +++|+.||.|+|..|..
T Consensus 282 ~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n 319 (571)
T 1y0p_A 282 LKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKN 319 (571)
T ss_dssp EECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred EEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccC
Confidence 8876 443 33332565 79999999999998863
No 60
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.91 E-value=8.1e-09 Score=106.38 Aligned_cols=119 Identities=17% Similarity=0.164 Sum_probs=86.6
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
++||+|||| ++|+++|..|+++|++|+|||+.+.++. .| ..+ .+. ..+ ..
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg--~~----------~~~--~~~-------------~~~--~~ 64 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGG--QL----------AAL--YPE-------------KHI--YD 64 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH--HH----------HHT--CTT-------------SEE--CC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC--cc----------ccc--CCC-------------ccc--cc
Confidence 699999996 5699999999999999999999865431 01 000 000 000 00
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCC-eEEEEEcCCcEEEcCEEEEecCCChHHH
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNFSPVV 264 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d-gv~V~~~~g~~i~ArlVV~ADG~~S~vr 264 (546)
.+. + ..+++..+.+.|.+.+.+.|++++.+++|+++..+++ .+.|++.+|++++++.||.|+|..|...
T Consensus 65 -----~~~-~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~ 134 (360)
T 3ab1_A 65 -----VAG-F-PEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEP 134 (360)
T ss_dssp -----STT-C-SSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCB
T ss_pred -----CCC-C-CCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCC
Confidence 000 0 0145677888888888888999999999999988765 6888888888999999999999987443
No 61
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.91 E-value=4.9e-09 Score=116.32 Aligned_cols=142 Identities=16% Similarity=0.178 Sum_probs=90.6
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC-CCCCccc-c---cCC-HHHHHHHHHcCCCCcccchhhhhhccCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT-LKGREQE-W---NIS-RKELLELVESGILVEDDIDEATATKFNP 181 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~-~~~~~r~-~---~Is-~~~l~~L~~lGl~~~~~ie~~i~~~~~~ 181 (546)
.+||||||||| +|+++|+.||++|.+|+|||+.. ..+...+ . .+. ...++.+..++-. +......
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~----~~~~~d~---- 91 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGE----MGKAIDA---- 91 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCS----HHHHHHH----
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccH----HHHHHHh----
Confidence 36999999965 69999999999999999999884 1221111 1 111 1122233333211 0000000
Q ss_pred Cccccc----CCcc-ccccccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEeCCeEE-EEEcCCcEEEcCEEE
Q 009027 182 NRCGFE----GKGE-IWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLII 254 (546)
Q Consensus 182 ~~v~f~----~~~~-l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~dgv~-V~~~~g~~i~ArlVV 254 (546)
..+.|. ...+ .+ .+...+|+..+.+.+.+.+.+. |++++.+ .|+++..+++.+. |.+.+|.+++|+.||
T Consensus 92 ~gi~f~~l~~~kgpav~---~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~-~V~~L~~d~g~V~GV~t~~G~~i~Ad~VV 167 (641)
T 3cp8_A 92 TGIQFRMLNRSKGPAMH---SPRAQADKTQYSLYMRRIVEHEPNIDLLQD-TVIGVSANSGKFSSVTVRSGRAIQAKAAI 167 (641)
T ss_dssp HEEEEEEECSSSCTTTC---EEEEEECHHHHHHHHHHHHHTCTTEEEEEC-CEEEEEEETTEEEEEEETTSCEEEEEEEE
T ss_pred cCCchhhcccccCcccc---chhhhcCHHHHHHHHHHHHHhCCCCEEEee-EEEEEEecCCEEEEEEECCCcEEEeCEEE
Confidence 001111 0001 11 1124689999999999999874 8898654 8999988888876 778788899999999
Q ss_pred EecCCChH
Q 009027 255 DAMGNFSP 262 (546)
Q Consensus 255 ~ADG~~S~ 262 (546)
.|+|.+|.
T Consensus 168 LATG~~s~ 175 (641)
T 3cp8_A 168 LACGTFLN 175 (641)
T ss_dssp ECCTTCBT
T ss_pred ECcCCCCC
Confidence 99998754
No 62
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.89 E-value=5.4e-09 Score=111.17 Aligned_cols=70 Identities=17% Similarity=0.191 Sum_probs=58.3
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEE---------------eCCeE-EEEEcCCcEE--EcCEEEEecCCCh
Q 009027 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICT---------------YENAA-VLLLAEGKIL--SSHLIIDAMGNFS 261 (546)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~---------------~~dgv-~V~~~~g~~i--~ArlVV~ADG~~S 261 (546)
..+++.++.+.|.+++.+.|++++.+++|+++.. +++++ .|.+.+| ++ +|+.||.|+|.+|
T Consensus 176 ~~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s 254 (448)
T 3axb_A 176 GFLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWS 254 (448)
T ss_dssp EECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGH
T ss_pred eEEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCH
Confidence 3478999999999999999999999999999987 45554 5777667 68 9999999999999
Q ss_pred H-HHHHhcCC
Q 009027 262 P-VVKQIRSG 270 (546)
Q Consensus 262 ~-vr~ql~~~ 270 (546)
. +...++..
T Consensus 255 ~~l~~~~g~~ 264 (448)
T 3axb_A 255 NRLLNPLGID 264 (448)
T ss_dssp HHHHGGGTCC
T ss_pred HHHHHHcCCC
Confidence 7 77776543
No 63
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.89 E-value=1.1e-08 Score=109.02 Aligned_cols=145 Identities=14% Similarity=0.065 Sum_probs=88.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCC--eEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCc------ccchh------h
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGL--RVAIVERNTLKGREQEWNISRKELLELVESGILVE------DDIDE------A 174 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~--rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~------~~ie~------~ 174 (546)
.+||+||||| +|+++|..|++.|+ +|+|+|+...++. .|...... -..+++-.. ..+.. .
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG--~~~~~~~~---~~~~~ip~~~~~~~~~~~~~g~~~~~~ 80 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGG--VWNYTSTL---SNKLPVPSTNPILTTEPIVGPAALPVY 80 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSST--TCSCCSCC---CSCCCSSBCCTTCCCCCBCCSSSCCBC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCC--eecCCCCC---CcccccccccccccccccccccccCCc
Confidence 5899999965 69999999999999 9999999865431 12211000 000000000 00000 0
Q ss_pred hhhccCCC-------cccccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcC---
Q 009027 175 TATKFNPN-------RCGFEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE--- 244 (546)
Q Consensus 175 i~~~~~~~-------~v~f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~--- 244 (546)
....|..- ...|.+ +..+......+++..+.+.|.+.+.+.+..++.+++|+++...++.++|++.+
T Consensus 81 ~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~ 157 (447)
T 2gv8_A 81 PSPLYRDLQTNTPIELMGYCD---QSFKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKA 157 (447)
T ss_dssp CCCCCTTCBCSSCHHHHSCTT---CCCCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESST
T ss_pred cCchhhhhccCCCHHHhccCC---CCCCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCC
Confidence 00000000 001110 00011111234677888999988887778899999999999888888888865
Q ss_pred Cc---EEEcCEEEEecCCChH
Q 009027 245 GK---ILSSHLIIDAMGNFSP 262 (546)
Q Consensus 245 g~---~i~ArlVV~ADG~~S~ 262 (546)
|+ +++++.||.|+|++|.
T Consensus 158 G~~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 158 GSPISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp TCCEEEEEESEEEECCCSSSS
T ss_pred CCeeEEEEeCEEEECCCCCCC
Confidence 66 7999999999999763
No 64
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.89 E-value=1.3e-08 Score=103.42 Aligned_cols=118 Identities=15% Similarity=0.181 Sum_probs=86.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
++||+||||| +|+++|..|+++|++|+|+|+++..+. .| . . ..+. .. +..
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg--~~---------~-~--~~~~-------------~~--~~~ 55 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGG--QL---------T-A--LYPE-------------KY--IYD 55 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCH--HH---------H-H--TCTT-------------SE--ECC
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC--ee---------e-c--cCCC-------------ce--eec
Confidence 6899999964 699999999999999999999865431 01 0 0 0000 00 000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChHH
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~v 263 (546)
. +. + ..+++..+.+.|.+.+.+.+++++.+++|+++..+++.+.|.+.++++++++.||.|+|.+|..
T Consensus 56 ~-----~~-~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~ 123 (335)
T 2zbw_A 56 V-----AG-F-PKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFE 123 (335)
T ss_dssp S-----TT-C-SSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEE
T ss_pred c-----CC-C-CCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCC
Confidence 0 00 0 0144667788888888888999999999999998888888888778889999999999997643
No 65
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.88 E-value=7.6e-09 Score=114.50 Aligned_cols=141 Identities=21% Similarity=0.166 Sum_probs=91.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC-CCCCccc----ccCCH-HHHHHHHHcCCCCcccchhhhhhccCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT-LKGREQE----WNISR-KELLELVESGILVEDDIDEATATKFNPN 182 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~-~~~~~r~----~~Is~-~~l~~L~~lGl~~~~~ie~~i~~~~~~~ 182 (546)
+||||||||| +|+.+|+.+|+.|++|+|||+.. ..+...+ ..+.. ...+.+..+|-. +...... .
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~----~~~~~d~----~ 98 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGE----MGKAIDQ----T 98 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCS----HHHHHHH----H
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhH----HHHHhhh----c
Confidence 6999999965 69999999999999999999974 2221111 11222 223444444421 1100000 0
Q ss_pred cccccC-----CccccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEeCCeEE-EEEcCCcEEEcCEEEE
Q 009027 183 RCGFEG-----KGEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIID 255 (546)
Q Consensus 183 ~v~f~~-----~~~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv~-V~~~~g~~i~ArlVV~ 255 (546)
.+.|.. +...+ .+...+|+..+.+.|.+.+.+ .|++++ +++|+++..+++.+. |.+.+|.+++|+.||.
T Consensus 99 gi~f~~l~~~kGpav~---~~r~~~Dr~~~~~~L~~~Le~~~GVeI~-~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVL 174 (637)
T 2zxi_A 99 GIQFKMLNTRKGKAVQ---SPRAQADKKRYREYMKKVCENQENLYIK-QEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVV 174 (637)
T ss_dssp EEEEEEESTTSCGGGC---EEEEEECHHHHHHHHHHHHHTCTTEEEE-ESCEEEEEESSSBEEEEEETTSCEEECSEEEE
T ss_pred ccceeecccccCcccc---chhhhCCHHHHHHHHHHHHHhCCCCEEE-EeEEEEEEecCCEEEEEEECCCcEEEeCEEEE
Confidence 011110 01111 122457899999999999988 588985 579999988777663 7777888999999999
Q ss_pred ecCCChH
Q 009027 256 AMGNFSP 262 (546)
Q Consensus 256 ADG~~S~ 262 (546)
|+|.+|.
T Consensus 175 ATG~~s~ 181 (637)
T 2zxi_A 175 TTGTFLN 181 (637)
T ss_dssp CCTTCBT
T ss_pred ccCCCcc
Confidence 9998754
No 66
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=98.88 E-value=1.2e-08 Score=113.24 Aligned_cols=141 Identities=18% Similarity=0.192 Sum_probs=90.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC-CCCCccc----ccCCH-HHHHHHHHcCCCCcccchhhhhhccCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT-LKGREQE----WNISR-KELLELVESGILVEDDIDEATATKFNPN 182 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~-~~~~~r~----~~Is~-~~l~~L~~lGl~~~~~ie~~i~~~~~~~ 182 (546)
+||||||||| +|+++|+.||+.|.+|+|||+.. ..+...+ ..+.. ...+.+..+|-. +...... .
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~----~~~~~d~----~ 99 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGL----MAKAIDQ----A 99 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCS----HHHHHHH----H
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccH----HHHHhhh----c
Confidence 6999999965 69999999999999999999874 2221111 11222 223344444421 1000000 0
Q ss_pred cccccC-----CccccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEeCCeE-EEEEcCCcEEEcCEEEE
Q 009027 183 RCGFEG-----KGEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIID 255 (546)
Q Consensus 183 ~v~f~~-----~~~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv-~V~~~~g~~i~ArlVV~ 255 (546)
.+.|.. +...+. +...+|+..+.+.|.+.+.+ .|++++ +++|+++..+++.+ .|.+.+|.+++|+.||.
T Consensus 100 gi~f~~l~~~kgpav~~---~r~~~Dr~~~~~~L~e~Le~~~GV~I~-~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVL 175 (651)
T 3ces_A 100 GIQFRILNASKGPAVRA---TRAQADRVLYRQAVRTALENQPNLMIF-QQAVEDLIVENDRVVGAVTQMGLKFRAKAVVL 175 (651)
T ss_dssp EEEEEEESTTSCGGGCE---EEEEECHHHHHHHHHHHHHTCTTEEEE-ECCEEEEEESSSBEEEEEETTSEEEEEEEEEE
T ss_pred ccchhhhhcccCccccc---chhhCCHHHHHHHHHHHHHhCCCCEEE-EEEEEEEEecCCEEEEEEECCCCEEECCEEEE
Confidence 011110 011111 12458898999999999988 688985 56899998777765 57777888899999999
Q ss_pred ecCCChH
Q 009027 256 AMGNFSP 262 (546)
Q Consensus 256 ADG~~S~ 262 (546)
|+|.+|.
T Consensus 176 ATGt~s~ 182 (651)
T 3ces_A 176 TVGTFLD 182 (651)
T ss_dssp CCSTTTC
T ss_pred cCCCCcc
Confidence 9999763
No 67
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.87 E-value=3.3e-08 Score=107.41 Aligned_cols=56 Identities=20% Similarity=0.233 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEeC-CeEE-EEEc-CCc--EEEcC-EEEEecCCCh
Q 009027 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYE-NAAV-LLLA-EGK--ILSSH-LIIDAMGNFS 261 (546)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~-dgv~-V~~~-~g~--~i~Ar-lVV~ADG~~S 261 (546)
.+.+.|.+++++.|++++++++|+++..++ +.++ |.+. +++ +|+|+ .||.|+|..|
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 788999999999999999999999998874 4332 3332 343 69995 9999999988
No 68
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.84 E-value=1.7e-08 Score=102.43 Aligned_cols=112 Identities=17% Similarity=0.227 Sum_probs=80.5
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
++||+|||| ++|+++|..|+++|++|+|+|+....+. |..+ + .+ ..+ .+
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~---~~~~----------~-----~~-----~~~-------~~ 57 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKGMPGGQ---IAWS----------E-----EV-----ENF-------PG 57 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGG---GGGC----------S-----CB-----CCS-------TT
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCCCCCcc---cccc----------c-----cc-----ccC-------CC
Confidence 699999996 5699999999999999999999843221 1100 0 00 000 00
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEe--CCe-EEEEEcCCcEEEcCEEEEecCCCh
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY--ENA-AVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~--~dg-v~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
+...+++..+.+.+.+.+.+.|++++. .+++++..+ ++. +.|.+.+|++++++.||.|+|..+
T Consensus 58 ---------~~~~~~~~~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~ 123 (325)
T 2q7v_A 58 ---------FPEPIAGMELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADP 123 (325)
T ss_dssp ---------CSSCBCHHHHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEE
T ss_pred ---------CCCCCCHHHHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 001245677888888888889999887 589888876 444 677777788999999999999865
No 69
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.82 E-value=3.9e-08 Score=109.13 Aligned_cols=63 Identities=14% Similarity=0.180 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHHHhcC-CEEEeCceEEEEEEeCCeE---EEE-EcCCc--EEEcCEEEEecCCChHHHHH
Q 009027 204 PAKLIEIVKKRFISLG-GVIFEGYSVSSICTYENAA---VLL-LAEGK--ILSSHLIIDAMGNFSPVVKQ 266 (546)
Q Consensus 204 ~~~L~~~L~~~a~~~G-~~v~~~t~v~~i~~~~dgv---~V~-~~~g~--~i~ArlVV~ADG~~S~vr~q 266 (546)
...+.+.|.+++.+.| ++++.++.++++..+++.+ .+. +.+|+ +++|+.||.|+|..|.+...
T Consensus 133 g~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~ 202 (602)
T 1kf6_A 133 GFHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRY 202 (602)
T ss_dssp HHHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSS
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccC
Confidence 4578889999998888 8999999999998887743 332 24665 79999999999999987543
No 70
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.80 E-value=1.3e-07 Score=104.40 Aligned_cols=68 Identities=12% Similarity=0.064 Sum_probs=54.6
Q ss_pred eeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeE-EEEEc---CCc--EEEcCEEEEecCCChH-HHHHhc
Q 009027 201 GVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMGNFSP-VVKQIR 268 (546)
Q Consensus 201 ~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~---~g~--~i~ArlVV~ADG~~S~-vr~ql~ 268 (546)
.+++.++...|.+.+.+.|++++.+++|+++..+++.+ .|.+. +++ +++|+.||.|+|.+|. +.+.++
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g 258 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNF 258 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCC
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhc
Confidence 47888999999999999999999999999999887764 35542 233 7999999999999985 554443
No 71
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.79 E-value=3.5e-08 Score=99.77 Aligned_cols=111 Identities=15% Similarity=0.196 Sum_probs=80.6
Q ss_pred CcccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 109 GTFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 109 ~~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
.+|||+|||| ++|+++|..|+++|++|+|+|+....+. +..+ . .+ .. +.
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~---~~~~-------------~--~~-----~~-------~~ 64 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVAGGL---TAEA-------------P--LV-----EN-------YL 64 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSTTGG---GGGC-------------S--CB-----CC-------BT
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcc---cccc-------------c--hh-----hh-------cC
Confidence 3699999996 5699999999999999999998543221 1100 0 00 00 00
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
. + ..++...+.+.+.+.+.+.|++++. .+++++..+++.+.|.+ ++.+++++.||.|+|..+
T Consensus 65 --------~-~-~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~ 126 (319)
T 3cty_A 65 --------G-F-KSIVGSELAKLFADHAANYAKIREG-VEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTH 126 (319)
T ss_dssp --------T-B-SSBCHHHHHHHHHHHHHTTSEEEET-CCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEE
T ss_pred --------C-C-cccCHHHHHHHHHHHHHHcCCEEEE-eeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCc
Confidence 0 0 1245567778888888888999887 78999988888888877 566899999999999765
No 72
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=98.77 E-value=5.6e-08 Score=96.51 Aligned_cols=110 Identities=22% Similarity=0.298 Sum_probs=81.1
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
+|||+||||| +|+++|..|+++|++|+|+|+...... + .. ....|.+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~---~---------------~~--------------~~~~~~~ 49 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNR---F---------------AS--------------HSHGFLG 49 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGG---G---------------CS--------------CCCSSTT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccc---c---------------ch--------------hhcCCcC
Confidence 5899999965 699999999999999999998753110 0 00 0000000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
. ..++...+.+.+.+.+.+. +++++. ++|+++..+++.+.|+++++++++++.||.|+|..+.
T Consensus 50 ~----------~~~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~ 113 (297)
T 3fbs_A 50 Q----------DGKAPGEIIAEARRQIERYPTIHWVE-GRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDE 113 (297)
T ss_dssp C----------TTCCHHHHHHHHHHHHTTCTTEEEEE-SCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEE
T ss_pred C----------CCCCHHHHHHHHHHHHHhcCCeEEEE-eEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCC
Confidence 0 1245677888888888877 456654 5899999998899999988889999999999998753
No 73
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.77 E-value=2.4e-08 Score=109.34 Aligned_cols=134 Identities=19% Similarity=0.212 Sum_probs=85.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
++||+||||| +|+++|..|+++|++|+|+|++...+. .|... ..-|+.. ... ...|. ..|.
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG--~w~~~-------~~pg~~~--d~~---~~~~~---~~f~- 77 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG--VWYWN-------RYPGARC--DIE---SIEYC---YSFS- 77 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT--HHHHC-------CCTTCBC--SSC---TTTSS---CCSC-
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC--ccccc-------CCCceee--ccc---ccccc---cccC-
Confidence 6999999965 699999999999999999999875542 12100 0001100 000 00000 0010
Q ss_pred Ccccc-ccccccceeCHHHHHHHHHHHHHhcC--CEEEeCceEEEEEEeCC--eEEEEEcCCcEEEcCEEEEecCCChH
Q 009027 189 KGEIW-VEDILNLGVSPAKLIEIVKKRFISLG--GVIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 189 ~~~l~-~~~~l~~~V~~~~L~~~L~~~a~~~G--~~v~~~t~v~~i~~~~d--gv~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
..+. .........++..+.+.|...+.+.+ ..++.+++|+++..+++ .+.|++++|++++|+.||.|+|..|.
T Consensus 78 -~~~~~~~~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~ 155 (542)
T 1w4x_A 78 -EEVLQEWNWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSV 155 (542)
T ss_dssp -HHHHHHCCCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCC
T ss_pred -hhhhhccCcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCC
Confidence 0000 00000112456777888877777665 57999999999988764 68899888889999999999998763
No 74
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.76 E-value=1.8e-08 Score=102.32 Aligned_cols=117 Identities=17% Similarity=0.175 Sum_probs=81.4
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
++||+|||| ++|+++|..|+++|++|+|+|+....... +. |.+.. ... . ..
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~----~g----------g~~~~-------~~~-----~--~~ 59 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIA----PG----------GQLTT-------TTD-----V--EN 59 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBC----TT----------CGGGG-------CSE-----E--CC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccC----CC----------ceeee-------ccc-----c--cc
Confidence 589999996 46999999999999999999982110000 00 00000 000 0 00
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
.+ .+...+++..+.+.|.+.+.+.|++++.++ ++++..+++.++|++ ++.+++++.||.|+|.+|.
T Consensus 60 -----~~-~~~~~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~ 125 (333)
T 1vdc_A 60 -----FP-GFPEGILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAK 125 (333)
T ss_dssp -----ST-TCTTCEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEEC
T ss_pred -----CC-CCccCCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcC
Confidence 00 011135567788888888888999999887 888887777888887 7778999999999998764
No 75
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.76 E-value=4.2e-08 Score=100.10 Aligned_cols=111 Identities=20% Similarity=0.270 Sum_probs=79.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
.+||+||||| +|+++|..|+++|++|+|+|+....+. |... . .+ .. +
T Consensus 14 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~---~~~~-------------~--~~-----~~-------~-- 61 (335)
T 2a87_A 14 VRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGA---LMTT-------------T--DV-----EN-------Y-- 61 (335)
T ss_dssp CEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSSCSCG---GGSC-------------S--CB-----CC-------S--
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCCc---eecc-------------c--hh-----hh-------c--
Confidence 6999999975 688999999999999999997633221 1000 0 00 00 0
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEE-EEcCCcEEEcCEEEEecCCCh
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVL-LLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V-~~~~g~~i~ArlVV~ADG~~S 261 (546)
+ .+...+++..+.+.+.+.+.+.|++++.++ +++++. ++.+.| .++++++++++.||.|+|..+
T Consensus 62 ------~-~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~ 126 (335)
T 2a87_A 62 ------P-GFRNGITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAA 126 (335)
T ss_dssp ------T-TCTTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEE
T ss_pred ------C-CCCCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCc
Confidence 0 011125567778888888888899999987 888876 556677 777788999999999999865
No 76
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.76 E-value=5.3e-08 Score=97.76 Aligned_cols=110 Identities=15% Similarity=0.141 Sum_probs=81.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
++||+||||| +|+++|..|+++|++|+|+|+. ..+. |.. .+ ..+ .+.+
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~gg~---~~~----------~~------------~~~-----~~~~ 63 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET-PGGQ---LTE----------AG------------IVD-----DYLG 63 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-TTGG---GGG----------CC------------EEC-----CSTT
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc-CCCe---ecc----------cc------------ccc-----ccCC
Confidence 6999999965 6999999999999999999988 2221 110 00 000 0000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
.+ .++...+.+.+.+.+.+.|++++. ++|+++..+++.+.|.+.++.+++++.||.|+|...
T Consensus 64 -----~~-----~~~~~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~ 125 (323)
T 3f8d_A 64 -----LI-----EIQASDMIKVFNKHIEKYEVPVLL-DIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKR 125 (323)
T ss_dssp -----ST-----TEEHHHHHHHHHHHHHTTTCCEEE-SCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEE
T ss_pred -----CC-----CCCHHHHHHHHHHHHHHcCCEEEE-EEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCC
Confidence 00 144667888888888889999988 899999988888899988888999999999999873
No 77
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.76 E-value=4.1e-08 Score=107.56 Aligned_cols=133 Identities=17% Similarity=0.264 Sum_probs=88.7
Q ss_pred cccEEEEcch-HHHHHHHHHH-hCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 110 TFDVIVCGGT-LGIFIATALS-FKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA-~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
++|||||||| +|+++|..|+ +.|++|+|+|++...+. .|... ..-|... .+. ...|.. .|.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GG--tw~~~-------~ypg~~~--d~~---s~~~~~---~~~ 70 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGG--TWYWN-------RYPGALS--DTE---SHLYRF---SFD 70 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCT--HHHHC-------CCTTCEE--EEE---GGGSSC---CSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCC--ccccc-------CCCCcee--cCC---cceeee---ccc
Confidence 6899999965 6999999999 99999999999865441 12100 0001100 000 001100 010
Q ss_pred CCcccc-ccccccceeCHHHHHHHHHHHHHhcCC--EEEeCceEEEEEEeCC--eEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 188 GKGEIW-VEDILNLGVSPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 188 ~~~~l~-~~~~l~~~V~~~~L~~~L~~~a~~~G~--~v~~~t~v~~i~~~~d--gv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
..+. .+.......++..+.+.|.+.+.+.|+ .++.+++|+++..+++ .+.|++++|++++|+.||.|+|..|
T Consensus 71 --~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 71 --RDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp --HHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred --cccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 0000 000011235677888999999988888 8999999999998876 7889998898999999999999876
No 78
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.76 E-value=2.5e-08 Score=100.98 Aligned_cols=118 Identities=19% Similarity=0.212 Sum_probs=83.7
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
..+||+||||| +|+++|..|+++|++|+|||+.+....... |.|.. .... ..+.
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~g--------------g~~~~-------~~~~----~~~~ 75 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAG--------------GQLTT-------TTEI----ENFP 75 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTT--------------CGGGG-------SSEE----CCST
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcC--------------ccccc-------chhh----cccC
Confidence 36999999965 699999999999999999999752111000 11100 0000 0000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEc---CCcEEEcCEEEEecCCCh
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~---~g~~i~ArlVV~ADG~~S 261 (546)
+ +...+++..+.+.+.+.+.+.|++++.++ ++++..+++.+.+.+. ++.+++++.||.|+|..+
T Consensus 76 ~---------~~~~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~ 142 (338)
T 3itj_A 76 G---------FPDGLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASA 142 (338)
T ss_dssp T---------CTTCEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEE
T ss_pred C---------CcccCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCc
Confidence 0 11124567788889999999999999998 9999888888888874 567899999999999864
No 79
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=98.75 E-value=5.1e-08 Score=99.85 Aligned_cols=41 Identities=17% Similarity=0.116 Sum_probs=37.6
Q ss_pred cCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecC
Q 009027 218 LGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMG 258 (546)
Q Consensus 218 ~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG 258 (546)
.|++|+.+++|+++..+++++.|++.+|++++++.||.|..
T Consensus 122 ~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vV~A~p 162 (342)
T 3qj4_A 122 SGAEVYFRHRVTQINLRDDKWEVSKQTGSPEQFDLIVLTMP 162 (342)
T ss_dssp HTCEEESSCCEEEEEECSSSEEEEESSSCCEEESEEEECSC
T ss_pred cCCEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCC
Confidence 38999999999999999999999998887799999999986
No 80
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.74 E-value=1.2e-07 Score=104.57 Aligned_cols=61 Identities=13% Similarity=0.110 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeC-Ce---EEEEEcCCc--EEEcCEEEEecCCChHH
Q 009027 203 SPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NA---AVLLLAEGK--ILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 203 ~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~-dg---v~V~~~~g~--~i~ArlVV~ADG~~S~v 263 (546)
....+.+.|.+++.+.|++++.+++|+++..++ +. +++...+|+ +++|+.||.|+|..|..
T Consensus 253 ~g~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~ 319 (572)
T 1d4d_A 253 VGAHVAQVLWDNAVKRGTDIRLNSRVVRILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKN 319 (572)
T ss_dssp HHHHHHHHHHHHHHHTTCEEESSEEEEEEEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred CHHHHHHHHHHHHHHcCCeEEecCEEEEEEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccC
Confidence 356788999999999999999999999998766 53 333333564 69999999999998864
No 81
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.74 E-value=2.8e-08 Score=109.10 Aligned_cols=134 Identities=18% Similarity=0.239 Sum_probs=88.4
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
.++|||||||| +|+++|..|++.|++|+|||++...+. .|... ..-|... .+. ...|. ..|.
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG--tw~~~-------~ypg~~~--dv~---s~~y~---~~f~ 82 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGG--VWYWN-------RYPGARC--DVE---SIDYS---YSFS 82 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT--HHHHC-------CCTTCBC--SSC---TTTSS---CCSC
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCC--ccccC-------CCCCcee--CCC---chhcc---cccc
Confidence 36999999975 688999999999999999999875442 11000 0001100 000 00010 0010
Q ss_pred CCcccc-ccccccceeCHHHHHHHHHHHHHhcCC--EEEeCceEEEEEEeCC--eEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 188 GKGEIW-VEDILNLGVSPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 188 ~~~~l~-~~~~l~~~V~~~~L~~~L~~~a~~~G~--~v~~~t~v~~i~~~~d--gv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
..+. .+.......++..+.+.+.+.+.+.|+ .++.+++|+++..+++ .++|++++|++++|+.||.|+|..|
T Consensus 83 --~~~~~~~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 83 --PELEQEWNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLS 159 (549)
T ss_dssp --HHHHHHCCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEE
T ss_pred --cccccCCCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCC
Confidence 0000 000011234677888899988888887 8999999999988776 7889998898999999999999765
No 82
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.71 E-value=1e-07 Score=98.05 Aligned_cols=136 Identities=18% Similarity=0.166 Sum_probs=84.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCC-eEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGL-RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~-rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
+|||+||||| +|+++|..|++.|+ +|+|||+.. .+. .|.-.+.. .-+.+.... ...+... .+.
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg--~~~~~~~~------~~~~~~~~~----~~~~g~~--~~~ 68 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGH--SFKHWPKS------TRTITPSFT----SNGFGMP--DMN 68 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTH--HHHTSCTT------CBCSSCCCC----CGGGTCC--CTT
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCC--ccccCccc------ccccCcchh----cccCCch--hhh
Confidence 5899999965 69999999999999 999999987 331 11100000 000000000 0000000 000
Q ss_pred CCccccccc--cccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 188 GKGEIWVED--ILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 188 ~~~~l~~~~--~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
.......+. .....+++..+.+.+.+.+.+.|++++.+++|+++..+++++.|.+.++ +++++.||.|.|..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 69 AISMDTSPAFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYN 143 (369)
T ss_dssp CSSTTCCHHHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTT
T ss_pred hccccccccccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCC
Confidence 000000000 0011245677888888888888999999999999988877888888666 599999999999876
No 83
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.71 E-value=3.1e-08 Score=108.57 Aligned_cols=59 Identities=10% Similarity=0.059 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHh-cCCEEEeCceEEEEEE-eCC------eEE-EEEc---CCc--EEEcCEEEEecCCChHH
Q 009027 205 AKLIEIVKKRFIS-LGGVIFEGYSVSSICT-YEN------AAV-LLLA---EGK--ILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 205 ~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~-~~d------gv~-V~~~---~g~--~i~ArlVV~ADG~~S~v 263 (546)
..+.+.|.+++.+ .|+++++++.|+++.. +++ .+. |.+. +|+ +++|+.||.|+|..|.+
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 210 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKV 210 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccc
Confidence 4566778888887 6899999999999987 434 332 3332 464 79999999999999865
No 84
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.71 E-value=6.2e-08 Score=97.76 Aligned_cols=115 Identities=21% Similarity=0.266 Sum_probs=84.1
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
.+||+||||| +|+++|..|+++|++|+|+|+.+..+. .| ... +....+ ..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG--~~-------~~~------------------~~~~~~--~~ 57 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGG--QL-------SAL------------------YPEKYI--YD 57 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH--HH-------HHH------------------CTTSEE--CC
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc--ee-------hhc------------------CCCceE--ec
Confidence 5899999965 699999999999999999999875431 11 000 000000 00
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCC-eEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d-gv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
.+.. ..+++..+...+.+.+.+.|++++.+++|+++...++ .+.|.+.+++ ++++.||.|+|..|
T Consensus 58 -----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 58 -----VAGF--PKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGA 123 (332)
T ss_dssp -----STTC--SSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSC
T ss_pred -----cCCC--CCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCc
Confidence 0000 0135678888899999888999999999999988877 7888887775 99999999999954
No 85
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.70 E-value=1.4e-07 Score=104.91 Aligned_cols=60 Identities=13% Similarity=0.203 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeE---EEEE-cCCc--EEEcCEEEEecCCChHH
Q 009027 204 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA---VLLL-AEGK--ILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 204 ~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv---~V~~-~~g~--~i~ArlVV~ADG~~S~v 263 (546)
...+.+.|.+++.+.|++++.++.|+++..+++.+ .+.. .+|+ .++|+.||.|+|..|.+
T Consensus 154 G~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 154 GHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 34788899999998999999999999998876643 3322 3564 79999999999998853
No 86
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=98.70 E-value=1.1e-07 Score=95.87 Aligned_cols=109 Identities=17% Similarity=0.209 Sum_probs=73.5
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
+|||+|||| ++|+++|..|+|+|++|+|+|+....+. +. ..+ +. |..
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~gg~------------------~~----------~~~-~~---~~~ 53 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTNRNR------------------VT----------QNS-HG---FIT 53 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCGGG------------------GS----------SCB-CC---STT
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCe------------------ee----------eec-CC---ccC
Confidence 699999995 5788999999999999999998753220 00 000 00 000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEe-CCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY-ENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~-~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
. -.+++..+.+...+.+.+.+...+....+..+... ++.++|.+.+|+++++|-||-|+|..
T Consensus 54 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 54 R----------DGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp C----------TTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCE
T ss_pred C----------CCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCc
Confidence 0 01345566666667776766654445555555544 44567888889999999999999975
No 87
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.66 E-value=7.9e-08 Score=96.82 Aligned_cols=111 Identities=11% Similarity=0.117 Sum_probs=79.2
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
.+||+|||| ++|+++|..|+++|++|+|+|+....+. +..+ . .+ .. +.
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~gg~---~~~~-------------~--~~-----~~-------~~- 53 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGMEKGGQ---LTTT-------------T--EV-----EN-------WP- 53 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSSTTGG---GGGC-------------S--BC-----CC-------ST-
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCCCCce---Eecc-------------h--hh-----hh-------CC-
Confidence 589999996 5699999999999999999997532221 1000 0 00 00 00
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
. +...+.+..+.+.+.+.+.+.|++++.++ ++.+..+++.+.| +.++.+++++.||.|+|..+
T Consensus 54 -------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~ 116 (320)
T 1trb_A 54 -------G-DPNDLTGPLLMERMHEHATKFETEIIFDH-INKVDLQNRPFRL-NGDNGEYTCDALIIATGASA 116 (320)
T ss_dssp -------T-CCSSCBHHHHHHHHHHHHHHTTCEEECCC-EEEEECSSSSEEE-EESSCEEEEEEEEECCCEEE
T ss_pred -------C-CCCCCCHHHHHHHHHHHHHHCCCEEEEee-eeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCc
Confidence 0 01124456777788888888899999886 8888877777877 66778899999999999865
No 88
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.66 E-value=2.1e-07 Score=102.97 Aligned_cols=59 Identities=14% Similarity=0.212 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhcCCEEEeCceEEEEEEe-CCeEE-EEE---cCCc--EEEcCEEEEecCCChHH
Q 009027 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTY-ENAAV-LLL---AEGK--ILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 205 ~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~-~dgv~-V~~---~~g~--~i~ArlVV~ADG~~S~v 263 (546)
..+.+.|.+++.+.|+++++++.|+++..+ ++.+. |.+ .+|+ +++|+.||.|+|..|.+
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 568888999999999999999999999886 44332 332 3554 69999999999998753
No 89
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.64 E-value=2.3e-07 Score=99.96 Aligned_cols=61 Identities=16% Similarity=0.175 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEE-EEEc-CCcEEEcCEEEEecCCChHHHH
Q 009027 204 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA-EGKILSSHLIIDAMGNFSPVVK 265 (546)
Q Consensus 204 ~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~-~g~~i~ArlVV~ADG~~S~vr~ 265 (546)
...+.+.|.+++.+.|++++.++++ ++..+++.+. |.+. ++.+++|+.||.|+|..|.+..
T Consensus 118 g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g~~~a~~VVlAtGg~~~~~~ 180 (472)
T 2e5v_A 118 GREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGFVTEKRGLVEDVDKLVLATGGYSYLYE 180 (472)
T ss_dssp HHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEEEETTTEEECCCSEEEECCCCCGGGSS
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEEEEEeCCCeEEeeeEEECCCCCcccCc
Confidence 4577888888888889999999999 9988777552 3332 2235889999999999997643
No 90
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.63 E-value=3.3e-08 Score=102.04 Aligned_cols=140 Identities=18% Similarity=0.140 Sum_probs=82.1
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCC-----c-----ccc-------------cCCHHHHHHHHHcC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-----E-----QEW-------------NISRKELLELVESG 164 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~-----~-----r~~-------------~Is~~~l~~L~~lG 164 (546)
.++|||||||| +|+++|+.|+++|++|+||||...+.. . ..+ .++..+++.+.++.
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~~~g~s~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWVELV 84 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCTTCTTCTTSSGGGCCCBCCCCSCTTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCCCCcCCcCcccCcccccccCcccCCCchHHHHHHHHHHHHHHHhC
Confidence 36899999965 699999999999999999999765431 0 001 01122334444431
Q ss_pred CCCcccchhh----h-------hhcc-CC--CcccccCCcccc-ccc---cccceeCHHHHHHHHHHHHHhcCCEEEeCc
Q 009027 165 ILVEDDIDEA----T-------ATKF-NP--NRCGFEGKGEIW-VED---ILNLGVSPAKLIEIVKKRFISLGGVIFEGY 226 (546)
Q Consensus 165 l~~~~~ie~~----i-------~~~~-~~--~~v~f~~~~~l~-~~~---~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t 226 (546)
-.. ..++.. + ..++ .. ..+......++. ... .....+++..+...|.+++.+.|++++. +
T Consensus 85 ~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~p~~~~g~~~~~~~v~p~~~~~~l~~~~~~~G~~i~~-~ 162 (363)
T 1c0p_A 85 PTG-HAMWLKGTRRFAQNEDGLLGHWYKDITPNYRPLPSSECPPGAIGVTYDTLSVHAPKYCQYLARELQKLGATFER-R 162 (363)
T ss_dssp TTT-SSEEEEEEEEEESSGGGGGGGTTTTTSTTCEECCGGGSSTTCEEEEEEEEECCHHHHHHHHHHHHHHTTCEEEE-C
T ss_pred ccc-CCeEEECCEEEEecCccchhHHHHHhCCCcEECCHHHCCCceEEEEEecceecHHHHHHHHHHHHHHCCCEEEE-E
Confidence 110 001000 0 0000 00 000000000110 000 0124589999999999999999999998 8
Q ss_pred eEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH
Q 009027 227 SVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 227 ~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
+|+++..+ .+ +|+.||.|+|.+|.
T Consensus 163 ~v~~l~~~-----------~~-~a~~VV~A~G~~s~ 186 (363)
T 1c0p_A 163 TVTSLEQA-----------FD-GADLVVNATGLGAK 186 (363)
T ss_dssp CCSBGGGT-----------CS-SCSEEEECCGGGGG
T ss_pred EcccHhhc-----------Cc-CCCEEEECCCcchh
Confidence 88876432 12 89999999999984
No 91
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.63 E-value=1.2e-07 Score=95.10 Aligned_cols=111 Identities=21% Similarity=0.222 Sum_probs=79.2
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
+|||+|||| ++|+++|..|+++|++|+|||+.. .+ .|.- ..+ + . .+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~-gG---~~~~---------~~~------~-----~-------~~~~ 49 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERF-GG---QILD---------TVD------I-----E-------NYIS 49 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSST-TG---GGGG---------CCE------E-----C-------CBTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC-Cc---eecc---------ccc------c-----c-------cccC
Confidence 489999996 569999999999999999998631 11 1100 000 0 0 0000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeC---CeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE---NAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~---dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
. ...++..+.+.+.+.+.+.|++++.+++++.+..+. +.+.|.+++|++++++.||.|+|..+
T Consensus 50 -----~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~ 115 (310)
T 1fl2_A 50 -----V-----PKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKW 115 (310)
T ss_dssp -----B-----SSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred -----c-----CCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCc
Confidence 0 012355677788888888899999999999987653 36888888888899999999999865
No 92
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.62 E-value=1.2e-07 Score=104.10 Aligned_cols=134 Identities=18% Similarity=0.179 Sum_probs=86.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
++|||||||| +|+++|..|++.|++|+|||++...+. .|... .--|+.. .... ..|. ..|..
T Consensus 9 ~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GG--tw~~~-------~yPg~~~--d~~~---~~y~---~~f~~ 71 (545)
T 3uox_A 9 ALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGG--TWYWN-------RYPGCRL--DTES---YAYG---YFALK 71 (545)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT--HHHHC-------CCTTCBC--SSCH---HHHC---HHHHT
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC--ccccC-------CCCceee--cCch---hhcc---cccCc
Confidence 6999999976 688999999999999999999875442 12100 0001000 0000 0000 00000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCC--EEEeCceEEEEEEeCC--eEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGG--VIFEGYSVSSICTYEN--AAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~--~v~~~t~v~~i~~~~d--gv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
. .......-....++..+.+.+.+.+.+.|. .++.+++|+++..+++ .+.|++++|++++|+.||.|+|..|
T Consensus 72 ~-~~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s 147 (545)
T 3uox_A 72 G-IIPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLS 147 (545)
T ss_dssp T-SSTTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCB
T ss_pred c-cccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCC
Confidence 0 000000001124567788888888888887 8899999999987655 7889998898999999999999765
No 93
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.62 E-value=2.7e-07 Score=96.95 Aligned_cols=58 Identities=22% Similarity=0.399 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEE-EEEcCCcEEEcCEEEEecCCChHH
Q 009027 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 205 ~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~~g~~i~ArlVV~ADG~~S~v 263 (546)
..+-+.|.+.+.+.|++|+.+++|+++..++++++ |.+ +|++++|+.||-|.|.....
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~~ 254 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAATA 254 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHHH
Confidence 34667788888889999999999999999988886 666 57789999999999877543
No 94
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.61 E-value=3.1e-07 Score=102.85 Aligned_cols=60 Identities=15% Similarity=0.186 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe---EEEEE-cCCc--EEEcCEEEEecCCChHH
Q 009027 204 PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA---AVLLL-AEGK--ILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 204 ~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg---v~V~~-~~g~--~i~ArlVV~ADG~~S~v 263 (546)
...+...|.+++.+.|+++++++.|+++..+++. +.+.. .+|+ .++|+.||.|+|..+.+
T Consensus 157 G~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 157 GHTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 3468889999998899999999999999887663 33322 4565 59999999999998843
No 95
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.61 E-value=2e-07 Score=93.52 Aligned_cols=115 Identities=21% Similarity=0.258 Sum_probs=78.2
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCC-cccchhhhhhccCCCccccc
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILV-EDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~-~~~ie~~i~~~~~~~~v~f~ 187 (546)
.|||+|||| ++|+++|..|+++|++|+|+|+....+.... |-+. ...++ . +.
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~--------------G~~~~~~~i~-----~-------~~ 57 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAG--------------GQLTTTTIIE-----N-------FP 57 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTT--------------CGGGGSSEEC-----C-------ST
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccC--------------CCcCChHHhh-----h-------cc
Confidence 699999995 5799999999999999999998764332100 1000 00000 0 00
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
+ +...++...+.+.+.+.+.+.+.++... .+.......+...+.+.++.+++++-||-|+|..
T Consensus 58 g---------~~~~i~~~~l~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 58 G---------FPNGIDGNELMMNMRTQSEKYGTTIITE-TIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp T---------CTTCEEHHHHHHHHHHHHHHTTCEEECC-CEEEEECSSSSEEEEETTCCEEEEEEEEECCCEE
T ss_pred C---------CcccCCHHHHHHHHHHHHhhcCcEEEEe-EEEEeecCCCceEEEECCCeEEEEeEEEEccccc
Confidence 0 1112455677777888888888887655 4555666666677777788899999999999974
No 96
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.60 E-value=1.8e-07 Score=100.52 Aligned_cols=145 Identities=17% Similarity=0.164 Sum_probs=86.3
Q ss_pred ccEEEEcch-HHHHHHHHHHh---CCCe---EEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCc
Q 009027 111 FDVIVCGGT-LGIFIATALSF---KGLR---VAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNR 183 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~---~G~r---VlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~ 183 (546)
+||+||||| +|+++|..|++ .|++ |+|+|+....+. .|...... -+...|+-....+-...........
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG--~w~~~~~~--g~~~~g~~~~~~~y~~l~~~~~~~~ 78 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGG--QWNYTWRT--GLDENGEPVHSSMYRYLWSNGPKEC 78 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCG--GGSCCSCC--SBCTTSSBCCCCCCTTCBCSSCGGG
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCC--EeecCCCC--CccccCCCCcCccccchhhcCChhh
Confidence 699999965 69999999999 9999 999999865441 22211000 0001111000000000000000000
Q ss_pred ccccCCcccccccc----ccceeCHHHHHHHHHHHHHhcCCE--EEeCceEEEEEEeCC--eEEEEEcC---C--cEEEc
Q 009027 184 CGFEGKGEIWVEDI----LNLGVSPAKLIEIVKKRFISLGGV--IFEGYSVSSICTYEN--AAVLLLAE---G--KILSS 250 (546)
Q Consensus 184 v~f~~~~~l~~~~~----l~~~V~~~~L~~~L~~~a~~~G~~--v~~~t~v~~i~~~~d--gv~V~~~~---g--~~i~A 250 (546)
..|.+ +..+.. ....+++..+.+.|.+.+.+.|++ ++.+++|+++...++ .+.|++.+ | .++++
T Consensus 79 ~~~~~---~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~ 155 (464)
T 2xve_A 79 LEFAD---YTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEF 155 (464)
T ss_dssp TCBTT---BCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEE
T ss_pred cccCC---CCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEc
Confidence 11111 000000 012356788889999988888987 999999999998776 77777754 4 47999
Q ss_pred CEEEEecCCChH
Q 009027 251 HLIIDAMGNFSP 262 (546)
Q Consensus 251 rlVV~ADG~~S~ 262 (546)
+.||.|+|..|.
T Consensus 156 d~VVvAtG~~s~ 167 (464)
T 2xve_A 156 DYVVCCTGHFST 167 (464)
T ss_dssp SEEEECCCSSSS
T ss_pred CEEEECCCCCCC
Confidence 999999997653
No 97
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.59 E-value=4e-07 Score=97.98 Aligned_cols=61 Identities=20% Similarity=0.218 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEE-EEEcCCcEEEcCEEEEecCCChHHHHH
Q 009027 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSPVVKQ 266 (546)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~~g~~i~ArlVV~ADG~~S~vr~q 266 (546)
.+-+.|.+.+++.|++|+.+++|++|..+++.++ |++++|++++||.||.+.+.....++.
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~L 283 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDL 283 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--------
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHh
Confidence 4567788888899999999999999999999887 888899999999999877766544443
No 98
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.55 E-value=1.7e-07 Score=99.57 Aligned_cols=42 Identities=17% Similarity=0.240 Sum_probs=38.2
Q ss_pred CEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 220 GVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 220 ~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
++|+.+++|++|..+++++.|++.+|++++|+.||.|.....
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKA 289 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHH
Confidence 599999999999999899999998898899999999987665
No 99
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.52 E-value=5e-07 Score=101.05 Aligned_cols=153 Identities=19% Similarity=0.205 Sum_probs=85.5
Q ss_pred cccEEEEcc-hHHHHHHHHHH---h-CCCeEEEEcCCCCCCCc----ccc--c--C----------CHHH-HHHHHH--c
Q 009027 110 TFDVIVCGG-TLGIFIATALS---F-KGLRVAIVERNTLKGRE----QEW--N--I----------SRKE-LLELVE--S 163 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA---~-~G~rVlLlEr~~~~~~~----r~~--~--I----------s~~~-l~~L~~--l 163 (546)
+|||||||| ++|+++|+.|+ + +|.+|+||||....+.. ..+ + + ++.. ++.+.. .
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~~~s~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~ 101 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAVERSGAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTLDMM 101 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCTTTCSTTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHHHTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCCCCCcceecccccccchhhHHHhcCCCCCHHHHHHHHHHHhc
Confidence 689999996 57999999999 6 89999999998764321 111 1 2 2221 111111 2
Q ss_pred CCCCcccchhhhh------hccCCCcccccC--CccccccccccceeCHHHHHHHHHHHHHhc-CC-EEEeCceEEEEEE
Q 009027 164 GILVEDDIDEATA------TKFNPNRCGFEG--KGEIWVEDILNLGVSPAKLIEIVKKRFISL-GG-VIFEGYSVSSICT 233 (546)
Q Consensus 164 Gl~~~~~ie~~i~------~~~~~~~v~f~~--~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~-~v~~~t~v~~i~~ 233 (546)
++.++.-++.... .......+.|.. ...+.........++...+.+.|.+++.+. |+ ++++++.|+++..
T Consensus 102 ~l~d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~ 181 (643)
T 1jnr_A 102 GLAREDLVADYARHVDGTVHLFEKWGLPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIFELLK 181 (643)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHTTCCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEEEEEE
T ss_pred CcCcHHHHHHHHHHHHHHHHHHHHcCCcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEEEEEE
Confidence 2322211110000 000000111210 001110000001123345677888888877 99 9999999999988
Q ss_pred eCC---eEE-EE---EcCCc--EEEcCEEEEecCCChH
Q 009027 234 YEN---AAV-LL---LAEGK--ILSSHLIIDAMGNFSP 262 (546)
Q Consensus 234 ~~d---gv~-V~---~~~g~--~i~ArlVV~ADG~~S~ 262 (546)
+++ .+. |. +.+|+ +++|+.||.|+|..|.
T Consensus 182 ~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~ 219 (643)
T 1jnr_A 182 DNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATL 219 (643)
T ss_dssp CTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred cCCccceeEEEEEEEecCCcEEEEEcCEEEECCCcccc
Confidence 766 442 22 24554 6999999999999885
No 100
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.52 E-value=3.3e-07 Score=96.47 Aligned_cols=56 Identities=16% Similarity=0.176 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH
Q 009027 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 205 ~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
..+-+.|.+.+.+.|++|+.+++|+++..+++++ |. .+|++++||.||-|.|....
T Consensus 189 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V~-~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 189 KAVIDELERIIMENKGKILTRKEVVEINIEEKKV-YT-RDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-EE-TTCCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-EE-eCCcEEEeCEEEECCCHHHH
Confidence 3566778888888999999999999999888888 64 57778999999999997754
No 101
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.51 E-value=1.2e-07 Score=101.13 Aligned_cols=143 Identities=13% Similarity=0.077 Sum_probs=84.4
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCC-----CeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKG-----LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPN 182 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G-----~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~ 182 (546)
..||||||||| +|+++|..|+++| ++|+|||+.+..+......+. ...+ +..-++.+.. ...+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~--------~~~~-~~~~~~~l~~-~~~p~ 98 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVS--------QSEL-QISFLKDLVS-LRNPT 98 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCS--------SCBC-SSCTTSSSST-TTCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCC--------CCcC-Ccchhhcccc-ccCCC
Confidence 36999999965 6999999999999 999999999865522110000 0000 0000000000 00000
Q ss_pred -ccccc----CCcccc-ccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEe---CCe--EEEEEcCCc----E
Q 009027 183 -RCGFE----GKGEIW-VEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY---ENA--AVLLLAEGK----I 247 (546)
Q Consensus 183 -~v~f~----~~~~l~-~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~---~dg--v~V~~~~g~----~ 247 (546)
...|. ....+. ....-.....+..+.+.|...+.+.+++++.+++|++++.. ++. +.|.+.++. +
T Consensus 99 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~ 178 (463)
T 3s5w_A 99 SPYSFVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELV 178 (463)
T ss_dssp CTTSHHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEE
T ss_pred CCCChhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEE
Confidence 00110 000000 00000122456778888888888888999999999999876 333 367666664 8
Q ss_pred EEcCEEEEecCCCh
Q 009027 248 LSSHLIIDAMGNFS 261 (546)
Q Consensus 248 i~ArlVV~ADG~~S 261 (546)
++++.||.|+|...
T Consensus 179 ~~~d~lVlAtG~~p 192 (463)
T 3s5w_A 179 RTTRALVVSPGGTP 192 (463)
T ss_dssp EEESEEEECCCCEE
T ss_pred EEeCEEEECCCCCC
Confidence 99999999999743
No 102
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.51 E-value=4.7e-07 Score=98.65 Aligned_cols=112 Identities=21% Similarity=0.246 Sum_probs=81.1
Q ss_pred CcccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 109 GTFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 109 ~~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
..|||+|||| ++|+++|..|+++|++|+|+|+.. .+ .|.- ..+ ++ . +.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~-GG---~~~~---------~~~------~~-----~-------~~ 259 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERF-GG---QVLD---------TVD------IE-----N-------YI 259 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSST-TG---GGTT---------CSC------BC-----C-------BT
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCC-CC---cccc---------ccc------cc-----c-------cC
Confidence 4799999996 569999999999999999999631 11 1100 000 00 0 00
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeC---CeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE---NAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~---dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
+ .+ ..+...+.+.+.+.+.+.|++++.+++|+++..+. +.+.|++++|.+++++.||.|+|..+
T Consensus 260 ~-----~~-----~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~ 326 (521)
T 1hyu_A 260 S-----VP-----KTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKW 326 (521)
T ss_dssp T-----BS-----SBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEE
T ss_pred C-----CC-----CCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCc
Confidence 0 00 13456778888888888999999999999987542 36888888888999999999999865
No 103
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.50 E-value=2.4e-07 Score=97.67 Aligned_cols=44 Identities=16% Similarity=0.100 Sum_probs=38.5
Q ss_pred HHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCC
Q 009027 215 FISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (546)
Q Consensus 215 a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~ 259 (546)
+.+.| +|+.+++|+++..++++++|++.+|++++|+.||.|.|.
T Consensus 214 ~~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~ 257 (431)
T 3k7m_X 214 SQEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPM 257 (431)
T ss_dssp HTTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCG
T ss_pred HhhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCc
Confidence 33446 999999999999888899999988888999999999993
No 104
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.44 E-value=7e-07 Score=100.04 Aligned_cols=59 Identities=17% Similarity=0.125 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHhc--CCEEEeCceEEEEEEeCC---eE---EEE-EcCCc--EEEcCEEEEecCCChH
Q 009027 204 PAKLIEIVKKRFISL--GGVIFEGYSVSSICTYEN---AA---VLL-LAEGK--ILSSHLIIDAMGNFSP 262 (546)
Q Consensus 204 ~~~L~~~L~~~a~~~--G~~v~~~t~v~~i~~~~d---gv---~V~-~~~g~--~i~ArlVV~ADG~~S~ 262 (546)
...+...|.+++++. |+++++++.++++..+++ .+ .+. ..+|+ .|+|+.||.|+|..+.
T Consensus 165 G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~ 234 (662)
T 3gyx_A 165 GESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVN 234 (662)
T ss_dssp ETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCS
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCcccc
Confidence 345778888888887 999999999999988766 33 222 23454 6999999999998774
No 105
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.43 E-value=1.6e-06 Score=87.33 Aligned_cols=111 Identities=22% Similarity=0.203 Sum_probs=69.7
Q ss_pred CCcccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 108 VGTFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 108 ~~~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
+.+|||+|||| ++|+++|..|+++|++|+|+||..+.+.. .+ .+- +. . +
T Consensus 4 e~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~gG~~--~~-----------~~~-----i~-----~-------~ 53 (312)
T 4gcm_A 4 EIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIPGGQM--AN-----------TEE-----VE-----N-------F 53 (312)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTGGG--GG-----------CSC-----BC-----C-------S
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCee--ec-----------ccc-----cC-----C-------c
Confidence 34799999995 57999999999999999999987543311 00 000 00 0 0
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
.+.. .+....+.........+.+..+..+..+..... .....+ ..+++++++|.||-|+|..
T Consensus 54 p~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 54 PGFE----------MITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDK-GEYKVI-NFGNKELTAKAVIIATGAE 115 (312)
T ss_dssp TTCS----------SBCHHHHHHHHHHHHHHTTCEEEECCCCEEEEC-SSCEEE-ECSSCEEEEEEEEECCCEE
T ss_pred CCcc----------ccchHHHHHHHHHHHhhccccccceeeeeeeee-ecceee-ccCCeEEEeceeEEcccCc
Confidence 0000 123345555556666667777777766554332 233333 3467799999999999964
No 106
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.43 E-value=1.7e-06 Score=86.33 Aligned_cols=109 Identities=16% Similarity=0.182 Sum_probs=76.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEE-EcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAI-VERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlL-lEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
++||+||||| +|+++|..|+++|++|+| +||....+. |..+ . .. ..+.
T Consensus 4 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~~~gG~---~~~~----------~-------------~~----~~~~ 53 (315)
T 3r9u_A 4 MLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKGMPGGQ---ITSS----------S-------------EI----ENYP 53 (315)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSSSTTGG---GGGC----------S-------------CB----CCST
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCCCCce---eeee----------c-------------ee----ccCC
Confidence 6999999965 699999999999999999 999443221 1000 0 00 0000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeC--CeEEEEEc-CCcEEEcCEEEEecCCC
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE--NAAVLLLA-EGKILSSHLIIDAMGNF 260 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~--dgv~V~~~-~g~~i~ArlVV~ADG~~ 260 (546)
+ +...++...+...+.+.+.+.|++++.+ +++++ .++ +.+.|.+. ++ +++++.||-|.|..
T Consensus 54 ~---------~~~~~~~~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~ 117 (315)
T 3r9u_A 54 G---------VAQVMDGISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSA 117 (315)
T ss_dssp T---------CCSCBCHHHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEE
T ss_pred C---------CCCCCCHHHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCC
Confidence 0 0112456778888888888899999888 88888 776 67775343 34 89999999999973
No 107
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.40 E-value=2.9e-08 Score=101.92 Aligned_cols=51 Identities=16% Similarity=0.247 Sum_probs=42.3
Q ss_pred ceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH
Q 009027 200 LGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 200 ~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
..+++..+.+.|.+++++.|+++++ ++|+++...+ .++|+.||.|+|.+|.
T Consensus 137 ~~v~p~~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~-----------~~~a~~VV~A~G~~s~ 187 (351)
T 3g3e_A 137 LILEGKNYLQWLTERLTERGVKFFQ-RKVESFEEVA-----------REGADVIVNCTGVWAG 187 (351)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEE-CCCCCHHHHH-----------HTTCSEEEECCGGGGG
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEE-EEeCCHHHhh-----------cCCCCEEEECCCcChH
Confidence 4589999999999999999999988 8887653221 2689999999999984
No 108
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.39 E-value=1.7e-07 Score=100.31 Aligned_cols=139 Identities=18% Similarity=0.073 Sum_probs=78.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
+|||+||||| +|+++|..|+++|++|+|+|+....+....++. ..+...+...++++ .+. .......+. +
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~gG~~~~~g~-~psk~ll~~~~~~~-----~~~-~~~~~~g~~--~ 73 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKYWGGVCLNVGC-IPSKALLRNAELVH-----IFT-KDAKAFGIS--G 73 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCTTHHHHHHSH-HHHHHHHHHHHHHH-----HHH-HHTTTTTEE--E
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCcccccCc-hhhHHHHHHHHHHH-----HHH-HHHHhcCCC--C
Confidence 5899999965 689999999999999999999844321110000 01112222222211 000 001000010 0
Q ss_pred Cccccccccc---cceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCC--cEEEcCEEEEecCCChH
Q 009027 189 KGEIWVEDIL---NLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFSP 262 (546)
Q Consensus 189 ~~~l~~~~~l---~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g--~~i~ArlVV~ADG~~S~ 262 (546)
...+..+... ... ...+.+.+.+.+.+.|++++.++.+. .+++.+.|.+.+| ++++++.||.|+|..+.
T Consensus 74 ~~~~~~~~~~~~~~~~--~~~l~~~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~ 147 (464)
T 2a8x_A 74 EVTFDYGIAYDRSRKV--AEGRVAGVHFLMKKNKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGSSTR 147 (464)
T ss_dssp CCEECHHHHHHHHHHH--HHHHHHHHHHHHHHTTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCEEEC
T ss_pred CCccCHHHHHHHHHHH--HHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCCCCC
Confidence 0000000000 000 12355566777777899999887653 4566788888777 68999999999998774
No 109
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.37 E-value=3.6e-07 Score=97.83 Aligned_cols=143 Identities=20% Similarity=0.196 Sum_probs=77.3
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCC-Cccccc-CCHHHHHHHHHcCCCCcccchhhhhhccCCCccc
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG-REQEWN-ISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~-~~r~~~-Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~ 185 (546)
.+|||+||||| +|+++|..|++.|++|+|||+.+..+ ....+. +.... .+....++ +.+. ..+....+.
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~--l~~~~~~~-----~~~~-~~~~~~g~~ 76 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKA--LLHSSHMY-----HEAK-HSFANHGVK 76 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHH--HHHHHHHH-----HHHH-HTHHHHTEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHH--HHHHHHHH-----HHHH-HHHHhcCcc
Confidence 36999999965 68899999999999999999985433 211111 11111 11100000 0000 000000000
Q ss_pred ccCCccccccccccce-eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCC--cEEEcCEEEEecCCChH
Q 009027 186 FEGKGEIWVEDILNLG-VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFSP 262 (546)
Q Consensus 186 f~~~~~l~~~~~l~~~-V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g--~~i~ArlVV~ADG~~S~ 262 (546)
+.. .....+...... --...+.+.+.+.+.+.|++++.++.+. .+++.+.|.+++| .+++++.||.|+|..+.
T Consensus 77 ~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~ 152 (470)
T 1dxl_A 77 VSN-VEIDLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF---VSPSEISVDTIEGENTVVKGKHIIIATGSDVK 152 (470)
T ss_dssp ESC-EEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE---EETTEEEECCSSSCCEEEECSEEEECCCEEEC
T ss_pred cCC-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCEEEEEeCCCceEEEEcCEEEECCCCCCC
Confidence 000 000000000000 0012344455666667799999998654 4667788877677 68999999999998764
Q ss_pred H
Q 009027 263 V 263 (546)
Q Consensus 263 v 263 (546)
+
T Consensus 153 ~ 153 (470)
T 1dxl_A 153 S 153 (470)
T ss_dssp C
T ss_pred C
Confidence 3
No 110
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.35 E-value=8.9e-07 Score=95.37 Aligned_cols=58 Identities=19% Similarity=0.306 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChHH
Q 009027 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~v 263 (546)
.+.+.+.+.+++.|++++.+++|+++..+++++.|.+++|+++.|+.||.|.|..+..
T Consensus 233 ~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 233 DLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPNT 290 (484)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcCC
Confidence 4667778888888999999999999998888888999888899999999999986543
No 111
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.35 E-value=3.6e-07 Score=98.39 Aligned_cols=141 Identities=21% Similarity=0.144 Sum_probs=75.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCC-cccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
+||||||||| +|+++|..|++.|++|+|||+....+. ...+...+ +...+....++. .++.. ..+ .+.+.
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p-sk~ll~~~~~~~--~~~~~--~~~---gi~~~ 77 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIP-SKALLHNAAVID--EVRHL--AAN---GIKYP 77 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHH-HHHHHHHHHHHH--HHHHG--GGG---TCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccc-hHHHHHHHHHHH--HHHHH--HhC---CcccC
Confidence 6999999965 688999999999999999999654331 10000001 111111111110 00000 000 01110
Q ss_pred CCccccccccccce-eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCC------------cEEEcCEEE
Q 009027 188 GKGEIWVEDILNLG-VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG------------KILSSHLII 254 (546)
Q Consensus 188 ~~~~l~~~~~l~~~-V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g------------~~i~ArlVV 254 (546)
. ..+..+...... --...+.+.+.+.+.+.|++++.++.+. .+++.+.|.+.+| .+++++.||
T Consensus 78 ~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lV 153 (482)
T 1ojt_A 78 E-PELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCI 153 (482)
T ss_dssp C-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEE
T ss_pred C-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEE
Confidence 0 000000000000 0002233445566677899999887654 4566777776555 579999999
Q ss_pred EecCCChH
Q 009027 255 DAMGNFSP 262 (546)
Q Consensus 255 ~ADG~~S~ 262 (546)
.|+|..+.
T Consensus 154 iAtGs~p~ 161 (482)
T 1ojt_A 154 IAAGSRVT 161 (482)
T ss_dssp ECCCEEEC
T ss_pred ECCCCCCC
Confidence 99998753
No 112
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.32 E-value=5.9e-06 Score=88.73 Aligned_cols=56 Identities=13% Similarity=0.071 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhcC-CEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 206 KLIEIVKKRFISLG-GVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 206 ~L~~~L~~~a~~~G-~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
.+-+.|.+.+.+.| ++|+.+++|++|..+++++.|++.+|++++|+.||.|.|...
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHH
Confidence 45566777777788 899999999999988888999988888899999999999653
No 113
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.32 E-value=2.3e-06 Score=91.46 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=35.9
Q ss_pred CCEEEeCceEEEEEEeCCeEEEEE---cCCcEEEcCEEEEecCCCh
Q 009027 219 GGVIFEGYSVSSICTYENAAVLLL---AEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 219 G~~v~~~t~v~~i~~~~dgv~V~~---~~g~~i~ArlVV~ADG~~S 261 (546)
|++|+.+++|++|..+++++.|++ .+|++++|+.||.|.+...
T Consensus 249 g~~i~~~~~V~~i~~~~~~~~v~~~~~~~g~~~~ad~vV~a~~~~~ 294 (478)
T 2ivd_A 249 GDAAHVGARVEGLAREDGGWRLIIEEHGRRAELSVAQVVLAAPAHA 294 (478)
T ss_dssp GGGEESSEEEEEEECC--CCEEEEEETTEEEEEECSEEEECSCHHH
T ss_pred hhhEEcCCEEEEEEecCCeEEEEEeecCCCceEEcCEEEECCCHHH
Confidence 679999999999998888888887 6777899999999998764
No 114
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.30 E-value=4e-07 Score=97.79 Aligned_cols=140 Identities=19% Similarity=0.157 Sum_probs=76.0
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCC-cccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
+|||+|||| ++|+++|..|+++|++|+|||+....+. ...... ..+...+...+++. .+. ..+....+.+.
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~-~psk~l~~~~~~~~-----~~~-~~~~~~gi~~~ 77 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGC-IPSKALLNNSHLFH-----QMH-TEAQKRGIDVN 77 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSH-HHHHHHHHHHHHHH-----HHH-HTSGGGTEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceecc-HHHHHHHHHHHHHH-----HHH-HHHHhcCcccC
Confidence 699999996 5699999999999999999999654431 100000 01111121111110 000 00000001000
Q ss_pred CCcccccccc---ccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCC--cE------EEcCEEEEe
Q 009027 188 GKGEIWVEDI---LNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KI------LSSHLIIDA 256 (546)
Q Consensus 188 ~~~~l~~~~~---l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g--~~------i~ArlVV~A 256 (546)
....+..+.. .... ...+...+.+.+.+.|++++.++.+. .+++.+.|.+.+| ++ ++++.||.|
T Consensus 78 ~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViA 152 (478)
T 1v59_A 78 GDIKINVANFQKAKDDA--VKQLTGGIELLFKKNKVTYYKGNGSF---EDETKIRVTPVDGLEGTVKEDHILDVKNIIVA 152 (478)
T ss_dssp SCEEECHHHHHHHHHHH--HHHHHHHHHHHHHHTTCEEEESEEEE---SSSSEEEEECCTTCTTCCSSCEEEEEEEEEEC
T ss_pred CCCccCHHHHHHHHHHH--HHHHHHHHHHHHHhCCCEEEEEEEEE---ccCCeEEEEecCCCcccccccceEEeCEEEEC
Confidence 0000000000 0000 11334445666677899999998764 2566788877666 56 999999999
Q ss_pred cCCCh
Q 009027 257 MGNFS 261 (546)
Q Consensus 257 DG~~S 261 (546)
+|..+
T Consensus 153 tGs~p 157 (478)
T 1v59_A 153 TGSEV 157 (478)
T ss_dssp CCEEE
T ss_pred cCCCC
Confidence 99876
No 115
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.23 E-value=3.2e-06 Score=90.18 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe-EEEEEcCCcEEEcCEEEEecCCC
Q 009027 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
.|-+.|.+.+.+.|++|+.+++|++|..++++ +.|++ ++.+++|+.||-|.+..
T Consensus 235 ~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~ 289 (477)
T 3nks_A 235 MLPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPAS 289 (477)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHH
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHH
Confidence 35667777788889999999999999887777 88876 55579999999998754
No 116
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.22 E-value=1e-05 Score=87.73 Aligned_cols=44 Identities=14% Similarity=0.095 Sum_probs=39.6
Q ss_pred cCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 218 LGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 218 ~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
.|++|+.+++|++|..++++++|.+.+|++++||.||.|.+...
T Consensus 225 lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 225 LGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGG
T ss_pred cCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHH
Confidence 37899999999999988888999988888999999999999765
No 117
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.22 E-value=1e-06 Score=93.95 Aligned_cols=135 Identities=19% Similarity=0.092 Sum_probs=75.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCccccc-CCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWN-ISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~-Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
+|||+||||| +|+++|..|++.|++|+|||+....+....+. +.... .+....+ .+.+ ..+....+.+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~gG~~~~~g~~p~k~--l~~~~~~-----~~~~--~~~~~~g~~~~ 73 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKGNLGGVCLNVGCIPSKA--LISASHR-----YEQA--KHSEEMGIKAE 73 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTHHHHHTSHHHHHH--HHHHHHH-----HHHH--HTCGGGTEECC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCcCcCcCchhhHH--HHHHHHH-----HHHH--HHHHhcCcccC
Confidence 6899999965 68899999999999999999984432111111 11111 1110000 0000 00000001110
Q ss_pred CCccccccccccceeCH-----HHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCC-cEEEcCEEEEecCCCh
Q 009027 188 GKGEIWVEDILNLGVSP-----AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG-KILSSHLIIDAMGNFS 261 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~-----~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g-~~i~ArlVV~ADG~~S 261 (546)
. .....+. .+.+ ..+.+.+.+.+.+.|++++.++.+. .+++.+.|.+.+| ++++++.||.|+|..+
T Consensus 74 ~-~~~~~~~----~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~i~~d~lViATGs~p 145 (455)
T 1ebd_A 74 N-VTIDFAK----VQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAYF---VDANTVRVVNGDSAQTYTFKNAIIATGSRP 145 (455)
T ss_dssp S-CEECHHH----HHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEEE---EETTEEEEEETTEEEEEECSEEEECCCEEE
T ss_pred C-CccCHHH----HHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ccCCeEEEEeCCCcEEEEeCEEEEecCCCC
Confidence 0 0000000 0111 1244455667777899999998653 4677888888777 6899999999999764
No 118
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.15 E-value=1.2e-05 Score=83.80 Aligned_cols=106 Identities=17% Similarity=0.188 Sum_probs=82.5
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-+|+||||| .|+-+|..|++.|.+|.|+|+.+.+.. .
T Consensus 146 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------~ 183 (384)
T 2v3a_A 146 RRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP------------------------------------------G 183 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh------------------------------------------c
Confidence 469999975 699999999999999999998652110 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH--HHHHh
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP--VVKQI 267 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~--vr~ql 267 (546)
..+..+.+.+.+.+++.|++++.+++++++..+++++.|.+++|+++.|+.||.|.|..+. +.+.+
T Consensus 184 ------------~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~~~l~~~~ 251 (384)
T 2v3a_A 184 ------------LLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPRTELAFAA 251 (384)
T ss_dssp ------------TSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECCHHHHHT
T ss_pred ------------ccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcCHHHHHHC
Confidence 0012344566777778899999999999998888888898888889999999999998764 45555
Q ss_pred cCC
Q 009027 268 RSG 270 (546)
Q Consensus 268 ~~~ 270 (546)
+..
T Consensus 252 g~~ 254 (384)
T 2v3a_A 252 GLA 254 (384)
T ss_dssp TCC
T ss_pred CCC
Confidence 543
No 119
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.14 E-value=1.1e-05 Score=85.94 Aligned_cols=41 Identities=10% Similarity=-0.022 Sum_probs=36.9
Q ss_pred CEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 220 GVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 220 ~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
++|+.+++|++|..+++++.|++.+| +++|+.||-|.+...
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~ 289 (475)
T 3lov_A 249 SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQ 289 (475)
T ss_dssp CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHH
T ss_pred CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHH
Confidence 69999999999999999999998888 799999999988653
No 120
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.11 E-value=2.4e-06 Score=91.62 Aligned_cols=142 Identities=19% Similarity=0.175 Sum_probs=73.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCC-cccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
+|||+||||| +|+++|..|+++|++|+|||+.+..+. ...+...+ +...+....++ +......+....+..
T Consensus 6 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~P-sk~l~~~~~~~-----~~~~~~~~~~~g~~~- 78 (474)
T 1zmd_A 6 DADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIP-SKALLNNSHYY-----HMAHGTDFASRGIEM- 78 (474)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHH-HHHHHHHHHHH-----HHHHSSHHHHTTEEE-
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccc-hHHHHHHHHHH-----HHhhhhhHhhCcccc-
Confidence 6999999965 688999999999999999999864431 11111001 00011100000 000000000000000
Q ss_pred CCccccccccccce-eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcC-C-cEEEcCEEEEecCCCh
Q 009027 188 GKGEIWVEDILNLG-VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE-G-KILSSHLIIDAMGNFS 261 (546)
Q Consensus 188 ~~~~l~~~~~l~~~-V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~-g-~~i~ArlVV~ADG~~S 261 (546)
+......+...... --...+...+.+.+.+.|++++.++.+. .+++.+.|.+.+ + ++++++.||.|+|..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~~~v~~~~gg~~~~~~d~lViAtGs~p 152 (474)
T 1zmd_A 79 SEVRLNLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKI---TGKNQVTATKADGGTQVIDTKNILIATGSEV 152 (474)
T ss_dssp SCEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---EETTEEEEECTTSCEEEEEEEEEEECCCEEE
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ecCCEEEEEecCCCcEEEEeCEEEECCCCCC
Confidence 00000000000000 0011233344566677899999886532 356778888766 4 5799999999999765
No 121
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.10 E-value=3.8e-06 Score=89.10 Aligned_cols=108 Identities=16% Similarity=0.286 Sum_probs=69.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCC--eEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGL--RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~--rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
.+|||||||| +|+++|..|+++|+ +|+|+|+.+.....+. .++ ..+-.....
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-~l~-----------------------~~~~~~~~~- 58 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLP-PLS-----------------------KAYLAGKAT- 58 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSG-GGG-----------------------TTTTTTCSC-
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCC-CCc-----------------------HHHhCCCCC-
Confidence 5899999965 69999999999999 7999998764321110 000 000000000
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
...+. +. +.+.+.+.|++++.+++|+.++.++. .|.+++|++++++.||.|+|..+
T Consensus 59 --~~~~~--------~~-------~~~~~~~~gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~p 114 (431)
T 1q1r_A 59 --AESLY--------LR-------TPDAYAAQNIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGGRP 114 (431)
T ss_dssp --SGGGB--------SS-------CHHHHHHTTEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEE
T ss_pred --hHHhc--------cc-------CHHHHHhCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCCCc
Confidence 00000 00 11233457899999999998875444 56667788999999999999865
No 122
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.05 E-value=7.3e-06 Score=88.55 Aligned_cols=58 Identities=10% Similarity=0.273 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChHH
Q 009027 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~v 263 (546)
.+.+.+.+.+++.|++++.+++|+++..+++++.|.+.+|+++.|+.||-|.|..+..
T Consensus 224 ~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 224 DAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred HHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 4567788888889999999999999988777788888788899999999999987654
No 123
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.04 E-value=3.7e-05 Score=81.39 Aligned_cols=43 Identities=21% Similarity=0.155 Sum_probs=37.4
Q ss_pred hcCCEEEeCceEEEEEEeCCe-EEEEEcCCcEEEcCEEEEecCCC
Q 009027 217 SLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 217 ~~G~~v~~~t~v~~i~~~~dg-v~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
+.|++|+.+++|++|..++++ +.|++ ++++++||.||.|.+..
T Consensus 224 ~lg~~i~~~~~V~~i~~~~~~~v~v~~-~~~~~~ad~VI~a~p~~ 267 (453)
T 2yg5_A 224 ALGDDVFLNAPVRTVKWNESGATVLAD-GDIRVEASRVILAVPPN 267 (453)
T ss_dssp HHGGGEECSCCEEEEEEETTEEEEEET-TTEEEEEEEEEECSCGG
T ss_pred hcCCcEEcCCceEEEEEeCCceEEEEE-CCeEEEcCEEEEcCCHH
Confidence 347899999999999999888 88876 67789999999999875
No 124
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.01 E-value=1.6e-05 Score=90.53 Aligned_cols=41 Identities=15% Similarity=0.034 Sum_probs=37.7
Q ss_pred cCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecC
Q 009027 218 LGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMG 258 (546)
Q Consensus 218 ~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG 258 (546)
.|++|+.+++|++|..++++++|++.+|++++|+.||.|..
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P 582 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVP 582 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCC
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCC
Confidence 47899999999999998899999998888999999999985
No 125
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.00 E-value=5.1e-06 Score=89.07 Aligned_cols=34 Identities=35% Similarity=0.454 Sum_probs=30.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
+|||+||||| +|+++|..|+++|++|+||||.+.
T Consensus 3 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~ 37 (476)
T 3lad_A 3 KFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKG 37 (476)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCc
Confidence 6999999965 688999999999999999999873
No 126
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.98 E-value=9.5e-06 Score=86.81 Aligned_cols=139 Identities=17% Similarity=0.138 Sum_probs=73.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCC-ccccc-CCHHHHHHHHHcCCCCcccchhhh--hhccCCCcc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWN-ISRKELLELVESGILVEDDIDEAT--ATKFNPNRC 184 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r~~~-Is~~~l~~L~~lGl~~~~~ie~~i--~~~~~~~~v 184 (546)
+|||+||||| +|+++|..|++.|++|+|||+.+..+. ...++ +.... .+....+ .+... ...+. +
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~--l~~~~~~-----~~~~~~~~~~~g---~ 71 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKA--LLHATHL-----YHDAHANFARYG---L 71 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHH--HHHHHHH-----HHHHHHTHHHHT---E
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHH--HHHHHHH-----HHHHHHHHHhcC---c
Confidence 6999999965 688999999999999999999854431 11000 11111 1100000 00000 00000 0
Q ss_pred cccCCccccccccccce-eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCC--cEEEcCEEEEecCCCh
Q 009027 185 GFEGKGEIWVEDILNLG-VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFS 261 (546)
Q Consensus 185 ~f~~~~~l~~~~~l~~~-V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g--~~i~ArlVV~ADG~~S 261 (546)
.+.....+..+...... --...+...+.+.+.+.|++++.++.+. .+++.+.|.+.+| .+++++.||.|+|...
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~---i~~~~~~v~~~~G~~~~~~~d~lviAtG~~p 148 (468)
T 2qae_A 72 MGGEGVTMDSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSF---ETAHSIRVNGLDGKQEMLETKKTIIATGSEP 148 (468)
T ss_dssp ECGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEE---EETTEEEEEETTSCEEEEEEEEEEECCCEEE
T ss_pred ccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---eeCCEEEEEecCCceEEEEcCEEEECCCCCc
Confidence 00000000000000000 0001233344556667799999887542 4567888888777 6899999999999743
No 127
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.98 E-value=2.2e-05 Score=84.05 Aligned_cols=133 Identities=16% Similarity=0.051 Sum_probs=71.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCC-ccccc-CCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWN-ISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r~~~-Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
+|||+||||| +|+++|..|+++|++|+||||....+. ...++ +....+ +..... .+...........+.+
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l--~~~a~~-----~~~~~~~~~~~~~~~~ 76 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTV--REVIQT-----AWRLTNIANVKIPLDF 76 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHH--HHHHHH-----HHHHHHHHCSCCCCCH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHH--HHHHHH-----HHHHHhcccCCCCcCH
Confidence 6999999965 688999999999999999997664431 11000 100000 000000 0000000000000000
Q ss_pred cCCccccccccccceeCHHHHH--HHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcE--EEcCEEEEecCCC
Q 009027 187 EGKGEIWVEDILNLGVSPAKLI--EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKI--LSSHLIIDAMGNF 260 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~--~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~--i~ArlVV~ADG~~ 260 (546)
+......-.-..+. ..+.+.+.+.|++++.+ ++..+ +++.+.|...+|++ ++++.||.|.|..
T Consensus 77 --------~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g-~v~~i--d~~~~~V~~~~g~~~~~~~d~lviAtG~~ 143 (466)
T 3l8k_A 77 --------STVQDRKDYVQELRFKQHKRNMSQYETLTFYKG-YVKIK--DPTHVIVKTDEGKEIEAETRYMIIASGAE 143 (466)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESE-EEEEE--ETTEEEEEETTSCEEEEEEEEEEECCCEE
T ss_pred --------HHHHHHHHhheeccccchHHHHHHhCCCEEEEe-EEEEe--cCCeEEEEcCCCcEEEEecCEEEECCCCC
Confidence 00000000000022 44455556678888877 45544 46788888888887 9999999999963
No 128
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.97 E-value=1.4e-05 Score=86.10 Aligned_cols=139 Identities=19% Similarity=0.212 Sum_probs=70.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCC-ccccc-CCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWN-ISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r~~~-Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
+|||+||||| +|+++|..|+++|++|+||||....+. ...++ +....+ +....+ .... ...+....+..
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l--~~~~~~-----~~~~-~~~~~~~g~~~ 96 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKAL--LHASEM-----FHQA-QHGLEALGVEV 96 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHH--HHHHHH-----HHHH-HHSSGGGTEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHH--HHHHHH-----HHHH-HhhHhhcCccc
Confidence 5999999965 688999999999999999998754431 10000 111110 000000 0000 00000000000
Q ss_pred cCCccccccccccc-eeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCC--cEEEcCEEEEecCCC
Q 009027 187 EGKGEIWVEDILNL-GVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNF 260 (546)
Q Consensus 187 ~~~~~l~~~~~l~~-~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g--~~i~ArlVV~ADG~~ 260 (546)
.. ..+..+..... .-.-..+...+...+.+.+++++.++... .+++.+.|...+| .+++++.||-|.|..
T Consensus 97 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~---~~~~~~~v~~~~g~~~~~~~d~lViATGs~ 169 (491)
T 3urh_A 97 AN-PKLNLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKV---LGQGKVSVTNEKGEEQVLEAKNVVIATGSD 169 (491)
T ss_dssp CC-CEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---CSSSEEEEECTTSCEEEEECSEEEECCCEE
T ss_pred CC-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ecCCEEEEEeCCCceEEEEeCEEEEccCCC
Confidence 00 00000000000 00001233344455666789998886432 4566778877666 489999999999965
No 129
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.96 E-value=6e-05 Score=81.86 Aligned_cols=34 Identities=26% Similarity=0.392 Sum_probs=30.1
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.+|||+||||| +|+++|..|++.|++|+|||+.+
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 36999999964 68889999999999999999864
No 130
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.95 E-value=4.6e-05 Score=81.11 Aligned_cols=98 Identities=19% Similarity=0.254 Sum_probs=77.4
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.|+|+.+..-.. .
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~-----------------------~------------------ 206 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT-----------------------M------------------ 206 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----------------------S------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-----------------------c------------------
Confidence 369999975 6999999999999999999987521100 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChHH
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~v 263 (546)
...+.+.+.+.+.+.|++++.+++++++..+++++.|++++|+++.++.||.|+|..+..
T Consensus 207 --------------~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 207 --------------DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYT 266 (455)
T ss_dssp --------------CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEECC
T ss_pred --------------CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcCC
Confidence 012334456666778999999999999998888888888788899999999999988754
No 131
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.94 E-value=5.3e-05 Score=81.00 Aligned_cols=98 Identities=12% Similarity=0.133 Sum_probs=76.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.|+|+.+..-..
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 207 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ------------------------------------------ 207 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------------------------------
Confidence 369999975 6999999999999999999987521100
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEc-C--Cc--EEEcCEEEEecCCChHH
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-E--GK--ILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~-~--g~--~i~ArlVV~ADG~~S~v 263 (546)
.+ ..+.+.+.+.+.+.|++++.+++++++..+++++.|+++ + |+ ++.+++||.|.|..+..
T Consensus 208 ------------~~-~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 208 ------------GD-PETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp ------------SC-HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESC
T ss_pred ------------cC-HHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCC
Confidence 00 123455666777889999999999999888888888876 6 76 89999999999987654
No 132
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.92 E-value=2e-05 Score=85.43 Aligned_cols=58 Identities=9% Similarity=0.039 Sum_probs=47.7
Q ss_pred eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCC--------eEEEEEcCC-----cEEEcCEEEEecCC
Q 009027 202 VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN--------AAVLLLAEG-----KILSSHLIIDAMGN 259 (546)
Q Consensus 202 V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d--------gv~V~~~~g-----~~i~ArlVV~ADG~ 259 (546)
..+..+.+.|...|.+.+..|+++++|+++...++ .++|++.++ .+++||.||-|.|.
T Consensus 142 p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 142 PARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp CBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 56888999999988887778999999999986543 488887643 37999999999995
No 133
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.92 E-value=1e-05 Score=86.08 Aligned_cols=111 Identities=14% Similarity=0.058 Sum_probs=68.8
Q ss_pred ccEEEEcch-HHHHHHHHHHhC--CCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 111 FDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~--G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
+|||||||| +|+++|..|+++ |++|+|||+.+......+ .+... --|.. . .+.+
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~------~~~~~-~~g~~-----~----------~~~~- 57 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC------GIALY-LGKEI-----K----------NNDP- 57 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG------GHHHH-HTTCB-----G----------GGCG-
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc------cchhh-hcCCc-----c----------cCCH-
Confidence 589999965 688899999988 999999999874332111 00000 00000 0 0000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEc-C--CcEEEcCEEEEecCCCh
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-E--GKILSSHLIIDAMGNFS 261 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~-~--g~~i~ArlVV~ADG~~S 261 (546)
..+. . .+.+.+.+.|++++.+++++.++.+++.+.+... + +.+++++.||.|+|...
T Consensus 58 --~~~~------~---------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p 117 (452)
T 2cdu_A 58 --RGLF------Y---------SSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKP 117 (452)
T ss_dssp --GGGB------S---------CCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred --HHhh------h---------cCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCc
Confidence 0000 0 0112234568999999999998776777766542 2 35799999999999653
No 134
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.88 E-value=1.7e-05 Score=85.23 Aligned_cols=110 Identities=14% Similarity=0.097 Sum_probs=69.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhC--CCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~--G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
.+|||||||| +|+++|..|++. |++|+|||+.+.....++ .+ ..+ ..... .
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-~~-----~~~--------------~~~~~----~-- 89 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC-GL-----PYV--------------ISGAI----A-- 89 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG-GH-----HHH--------------HTTSS----S--
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC-Cc-----chh--------------hcCCc----C--
Confidence 4799999965 688899999985 999999999875432111 01 000 00000 0
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHH-HhcCCEEEeCceEEEEEEeCCeEEEEE-cCCc--EEEcCEEEEecCCCh
Q 009027 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRF-ISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNFS 261 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a-~~~G~~v~~~t~v~~i~~~~dgv~V~~-~~g~--~i~ArlVV~ADG~~S 261 (546)
....+.. . ..+.+ ...|++++.+++++.++.+++.+.+.. .+|+ +++++.||.|+|...
T Consensus 90 -~~~~l~~-----~----------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p 152 (480)
T 3cgb_A 90 -STEKLIA-----R----------NVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRP 152 (480)
T ss_dssp -CGGGGBS-----S----------CHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred -CHHHhhh-----c----------CHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcc
Confidence 0000000 0 01122 234899999999999887777777765 3465 799999999999653
No 135
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.86 E-value=7.7e-06 Score=87.21 Aligned_cols=138 Identities=18% Similarity=0.150 Sum_probs=71.4
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCC-CcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKG-REQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~-~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
+|||+|||| ++|+++|..|++.|++|+|||+.+..+ ....+...+ +...+....++ +.+....+ .+.+.
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p-~k~l~~~~~~~-----~~~~~~~~---g~~~~ 71 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIP-SKALLETTERI-----YEAKKGLL---GAKVK 71 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHH-HHHHHHHHHHH-----HHHHHCCT---TEEEC
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchh-HHHHHHHHHHH-----HHHhhhcC---CcccC
Confidence 489999996 468899999999999999999985433 111111101 11111111100 00000000 01110
Q ss_pred CCccccccccccce-eCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 188 GKGEIWVEDILNLG-VSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 188 ~~~~l~~~~~l~~~-V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
. .....+...... --...+...+.+.+.+.|++++.++.+. .+++.+.|.+ +|.+++++.||.|+|...
T Consensus 72 ~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~---i~~~~~~v~~-~g~~~~~d~lviAtG~~p 141 (455)
T 2yqu_A 72 G-VELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARF---LSERKVLVEE-TGEELEARYILIATGSAP 141 (455)
T ss_dssp C-EEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE---SSSSEEEETT-TCCEEEEEEEEECCCEEE
T ss_pred C-CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEee-CCEEEEecEEEECCCCCC
Confidence 0 000000000000 0001233334555666799999887542 3455666655 677899999999999753
No 136
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.85 E-value=2.2e-05 Score=82.50 Aligned_cols=107 Identities=20% Similarity=0.204 Sum_probs=69.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCe--EEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLR--VAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~r--VlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
++|||||||| +|+++|..|+++|++ |+|+|+.+.....+. .+ ...+-.....
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~-~l-----------------------~~~~~~~~~~- 63 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERP-PL-----------------------SKEYLAREKT- 63 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSG-GG-----------------------GTTTTTTSSC-
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcc-cC-----------------------CHHHHcCCCC-
Confidence 6899999965 699999999999998 999999875432211 00 0000000000
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
...+. ... .+.+.+.|++++.+++++.++.+. ..|.+.+++++.++.||-|+|..
T Consensus 64 --~~~~~--------~~~-------~~~~~~~~i~~~~~~~v~~id~~~--~~v~~~~g~~~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 64 --FERIC--------IRP-------AQFWEDKAVEMKLGAEVVSLDPAA--HTVKLGDGSAIEYGKLIWATGGD 118 (415)
T ss_dssp --SGGGB--------SSC-------HHHHHHTTEEEEETCCEEEEETTT--TEEEETTSCEEEEEEEEECCCEE
T ss_pred --HHHhc--------cCC-------HHHHHHCCcEEEeCCEEEEEECCC--CEEEECCCCEEEeeEEEEccCCc
Confidence 00000 000 122345689999999999886543 35667788899999999999953
No 137
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.85 E-value=7.9e-05 Score=80.14 Aligned_cols=33 Identities=30% Similarity=0.460 Sum_probs=29.4
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERN 141 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~ 141 (546)
.+|||+||||| +|+++|..|++.|++|+||||.
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 47999999964 6888999999999999999974
No 138
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.84 E-value=8.9e-05 Score=78.94 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=75.5
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.|+|+.+.+-. .
T Consensus 169 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~------------ 205 (450)
T 1ges_A 169 RVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-------------------------------S------------ 205 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------T------------
T ss_pred eEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-------------------------------h------------
Confidence 69999976 699999999999999999998742100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe-EEEEEcCCcEEEcCEEEEecCCChHH
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~~~g~~i~ArlVV~ADG~~S~v 263 (546)
++ ..+.+.+.+.+++.|++++.+++++++..++++ +.|++++|+++.++.||.|.|..+.+
T Consensus 206 -----------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 206 -----------FD-PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPAN 267 (450)
T ss_dssp -----------SC-HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred -----------hh-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 00 113445566677789999999999999876654 77888888899999999999987654
No 139
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.84 E-value=8.8e-06 Score=87.75 Aligned_cols=110 Identities=16% Similarity=0.183 Sum_probs=69.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhCC---CeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKG---LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G---~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~ 185 (546)
++|||||||| +|+++|..|+++| ++|+|||+.+......+ . +... ++ .. +
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~-~-----~~~~--~~------------~~-----~- 88 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGA-G-----MALW--IG------------EQ-----I- 88 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGG-G-----HHHH--HT------------TS-----S-
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCcccc-c-----cchh--hc------------Cc-----c-
Confidence 4899999965 6888999999988 99999999874332111 0 0000 00 00 0
Q ss_pred ccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcC-CcEEEcCEEEEecCCCh
Q 009027 186 FEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE-GKILSSHLIIDAMGNFS 261 (546)
Q Consensus 186 f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~-g~~i~ArlVV~ADG~~S 261 (546)
.....+.. . +.+.+.+.|++++.+++++.++.+++.+.+...+ +.+++++.||.|+|...
T Consensus 89 -~~~~~~~~--------~-------~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p 149 (490)
T 2bc0_A 89 -AGPEGLFY--------S-------DKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQP 149 (490)
T ss_dssp -SCSGGGBS--------C-------CHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEE
T ss_pred -CCHHHhhh--------c-------CHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCc
Confidence 00000000 0 0122345689999999999987767766665222 34799999999999653
No 140
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.82 E-value=1.7e-05 Score=84.03 Aligned_cols=106 Identities=15% Similarity=0.104 Sum_probs=69.7
Q ss_pred cccEEEEcch-HHHHHHHHHHh---CCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSF---KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCG 185 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~---~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~ 185 (546)
+.|||||||| +|+++|..|++ .|++|+|||+.+....... +..+ ..|.
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~~-------~~~~-~~g~-------------------- 55 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVPS-------NPWV-GVGW-------------------- 55 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGGG-------HHHH-HHTS--------------------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccCC-------cccc-ccCc--------------------
Confidence 4799999975 69999999998 8999999998863211100 0000 0000
Q ss_pred ccCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH
Q 009027 186 FEGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 186 f~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
.+...+...+.+.+.+.|++++. .++++++.++. .|++++++++.+|.||.|.|..+.
T Consensus 56 ----------------~~~~~~~~~l~~~~~~~gv~~~~-~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~~~~ 113 (437)
T 3sx6_A 56 ----------------KERDDIAFPIRHYVERKGIHFIA-QSAEQIDAEAQ--NITLADGNTVHYDYLMIATGPKLA 113 (437)
T ss_dssp ----------------SCHHHHEEECHHHHHTTTCEEEC-SCEEEEETTTT--EEEETTSCEEECSEEEECCCCEEC
T ss_pred ----------------cCHHHHHHHHHHHHHHCCCEEEE-eEEEEEEcCCC--EEEECCCCEEECCEEEECCCCCcC
Confidence 01111222233445567899874 68888865544 567778888999999999998654
No 141
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.81 E-value=3e-05 Score=83.35 Aligned_cols=137 Identities=18% Similarity=0.158 Sum_probs=71.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCccccc-CCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWN-ISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~-Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
+||||||||| +|+++|..|++.|++|+||||....+....++ +..+.+..-. .+...+ .. .....+.
T Consensus 11 ~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~~GG~~~n~gciP~k~l~~~~--------~~~~~~-~~--~~~~g~~ 79 (479)
T 2hqm_A 11 HYDYLVIGGGSGGVASARRAASYGAKTLLVEAKALGGTCVNVGCVPKKVMWYAS--------DLATRV-SH--ANEYGLY 79 (479)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSCTTHHHHHHSHHHHHHHHHHH--------HHHHHH-TT--TTTTTBS
T ss_pred cCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCCcCCcCcccCcHHHHHHHHHH--------HHHHHH-Hh--HHhcCcc
Confidence 6999999965 68899999999999999999985433211000 1111110000 000000 00 0000000
Q ss_pred CCcc-ccccccccc--eeC-----HHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCc--EEEcCEEEEec
Q 009027 188 GKGE-IWVEDILNL--GVS-----PAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK--ILSSHLIIDAM 257 (546)
Q Consensus 188 ~~~~-l~~~~~l~~--~V~-----~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~--~i~ArlVV~AD 257 (546)
.... ........+ .+. ...+...+.+.+.+.|++++.++ ++.+ +++.+.|.+.+|+ +++++.||.|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~-~~~i--~~~~~~v~~~~g~~~~~~~d~lviAt 156 (479)
T 2hqm_A 80 QNLPLDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGW-ARFN--KDGNVEVQKRDNTTEVYSANHILVAT 156 (479)
T ss_dssp TTSCCSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEE-EEEC--TTSCEEEEESSSCCEEEEEEEEEECC
T ss_pred cccccccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeE-EEEe--eCCEEEEEeCCCcEEEEEeCEEEEcC
Confidence 0000 000000000 000 01233445556667788988774 4433 4556777776776 89999999999
Q ss_pred CCC
Q 009027 258 GNF 260 (546)
Q Consensus 258 G~~ 260 (546)
|..
T Consensus 157 Gs~ 159 (479)
T 2hqm_A 157 GGK 159 (479)
T ss_dssp CEE
T ss_pred CCC
Confidence 964
No 142
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.80 E-value=5.3e-05 Score=80.52 Aligned_cols=106 Identities=20% Similarity=0.170 Sum_probs=65.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhC--CCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~--G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
.+||+||||| +|+++|..|++. |++|+|+|+.+......+ ++- .+ +
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~--------------~~p-----------~~----~-- 51 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC--------------GIP-----------YV----V-- 51 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc--------------CCc-----------cc----c--
Confidence 4799999965 699999999987 899999999874331110 000 00 0
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHH-HhcCCEEEeCceEEEEEEeCCeEEEEEcCC-cEEEcCEEEEecCCC
Q 009027 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRF-ISLGGVIFEGYSVSSICTYENAAVLLLAEG-KILSSHLIIDAMGNF 260 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a-~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g-~~i~ArlVV~ADG~~ 260 (546)
.+. .+...+.....+.+ .+.|++++.++++++++ .+...|.++++ .+++++.||-|.|..
T Consensus 52 ~~~------------~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~--~~~~~v~~~~g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 52 EGL------------STPDKLMYYPPEVFIKKRGIDLHLNAEVIEVD--TGYVRVRENGGEKSYEWDYLVFANGAS 113 (449)
T ss_dssp --------------------------CTHHHHTTCEEETTCEEEEEC--SSEEEEECSSSEEEEECSEEEECCCEE
T ss_pred CCC------------CCHHHhhhcCHHHHHHhcCcEEEecCEEEEEe--cCCCEEEECCceEEEEcCEEEECCCCC
Confidence 000 00001111111222 45689999999998874 45567777666 489999999999964
No 143
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.80 E-value=9.1e-05 Score=79.51 Aligned_cols=33 Identities=33% Similarity=0.484 Sum_probs=29.0
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERN 141 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~ 141 (546)
.+||||||||| +|+++|..|+++|++|+||||.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 37999999965 6888999999999999999963
No 144
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.77 E-value=2.9e-05 Score=82.48 Aligned_cols=109 Identities=15% Similarity=0.153 Sum_probs=68.2
Q ss_pred ccEEEEcch-HHHHHHHHHHhC--CCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 111 FDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~--G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
+|||||||| +|+++|..|++. |++|+|||+.+..+...+ . +... --+. + .
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-~-----~~~~-~~~~-------------~-------~ 53 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSA-G-----MQLY-LEGK-------------V-------K 53 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGG-G-----HHHH-HTTS-------------S-------C
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccc-c-----chhh-hcCc-------------c-------C
Confidence 489999965 688899999987 999999999875432111 0 0000 0000 0 0
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEE-cCCc--EEEcCEEEEecCCCh
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNFS 261 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~-~~g~--~i~ArlVV~ADG~~S 261 (546)
....+.. .+.+.+.+.|++++.+++++.++.+++.+.+.. .+|+ +++++.||.|+|...
T Consensus 54 ~~~~~~~---------------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 54 DVNSVRY---------------MTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp CGGGSBS---------------CCHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred CHHHhhc---------------CCHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCc
Confidence 0000000 001223356899999999999877777776664 3454 499999999999653
No 145
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.75 E-value=3.1e-05 Score=82.42 Aligned_cols=108 Identities=15% Similarity=0.148 Sum_probs=69.2
Q ss_pred ccEEEEcch-HHHHHHHHHHhC--CCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 111 FDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~--G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
.|||||||| +|+++|..|+++ |++|+|||+.+..+..+. ++. .+..... .
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~--------------~~~-----------~~~~~~~--~ 55 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSG--------------GLS-----------AYFNHTI--N 55 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCc--------------cch-----------hhhcCCC--C
Confidence 599999965 699999999988 999999999875442111 000 0000000 0
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEc-CCcEEEcCEEEEecCCC
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-EGKILSSHLIIDAMGNF 260 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~-~g~~i~ArlVV~ADG~~ 260 (546)
....+. . .+.+.+.+.|++++.+++|++++..+..+.+... ++.+++++.||-|.|..
T Consensus 56 ~~~~~~--------~-------~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~ 114 (452)
T 3oc4_A 56 ELHEAR--------Y-------ITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGAS 114 (452)
T ss_dssp -----C--------C-------CCHHHHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCC
T ss_pred CHHHhh--------c-------CCHHHHHHCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcc
Confidence 000000 0 0112334568899999999999887777777632 35589999999999985
No 146
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.73 E-value=3.8e-05 Score=82.30 Aligned_cols=36 Identities=36% Similarity=0.529 Sum_probs=31.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~ 145 (546)
+|||+||||| +|+++|..|+++|++|+||||....+
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~~~GG 56 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESHKLGG 56 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCCCCC
Confidence 6999999965 68899999999999999999876544
No 147
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.73 E-value=8.6e-05 Score=79.28 Aligned_cols=35 Identities=26% Similarity=0.348 Sum_probs=30.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
+|||+||||| +|+++|..|+++|++|+|||+....
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~G 39 (467)
T 1zk7_A 4 PVQVAVIGSGGAAMAAALKAVEQGAQVTLIERGTIG 39 (467)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCC
Confidence 6999999965 6889999999999999999998543
No 148
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.71 E-value=3.9e-05 Score=81.93 Aligned_cols=35 Identities=29% Similarity=0.369 Sum_probs=30.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
+|||+||||| +|+++|..|+++|++|+||||....
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~~~G 40 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEFRYG 40 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCTT
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCCC
Confidence 6999999965 6889999999999999999995443
No 149
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.71 E-value=0.00038 Score=72.75 Aligned_cols=105 Identities=20% Similarity=0.312 Sum_probs=80.5
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++|+.+.+-. .
T Consensus 144 ~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~------------------------------------------~- 180 (404)
T 3fg2_P 144 HVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA------------------------------------------R- 180 (404)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT------------------------------------------T-
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh------------------------------------------h-
Confidence 59999975 699999999999999999997752110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeE-EEEEcCCcEEEcCEEEEecCCCh--HHHHHh
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFS--PVVKQI 267 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~~g~~i~ArlVV~ADG~~S--~vr~ql 267 (546)
. . ...+.+.+.+.+++.|++++.+++++++..+++.+ .|.+++|+++.|++||-|.|... .+.+.+
T Consensus 181 ------~----~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~~~l~~~~ 249 (404)
T 3fg2_P 181 ------V----V-TPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPNVEIAAAA 249 (404)
T ss_dssp ------T----S-CHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEECCHHHHHT
T ss_pred ------c----c-CHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccCHHHHHhC
Confidence 0 0 02344566777788899999999999998877766 48888899999999999999854 456666
Q ss_pred cCC
Q 009027 268 RSG 270 (546)
Q Consensus 268 ~~~ 270 (546)
++.
T Consensus 250 gl~ 252 (404)
T 3fg2_P 250 GLP 252 (404)
T ss_dssp TCC
T ss_pred CCC
Confidence 554
No 150
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.69 E-value=0.00015 Score=77.52 Aligned_cols=97 Identities=18% Similarity=0.182 Sum_probs=76.2
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.|+|+.+.+-. .
T Consensus 168 ~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~------------ 204 (463)
T 2r9z_A 168 RVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-------------------------------Q------------ 204 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------T------------
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-------------------------------c------------
Confidence 69999976 699999999999999999997742100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCc-EEEcCEEEEecCCChHH
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK-ILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~-~i~ArlVV~ADG~~S~v 263 (546)
++ ..+.+.+.+.+.+.|++++.+++++++..+++++.|++++|+ ++.++.||.|.|..+..
T Consensus 205 -----------~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 205 -----------FD-PLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred -----------cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 00 012244566677789999999999999888778888888888 89999999999987654
No 151
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.69 E-value=4e-05 Score=80.13 Aligned_cols=106 Identities=12% Similarity=0.124 Sum_probs=69.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
..-|+||||| +|+++|..|+..|.+|+|||+.+.....+. .++. .+ .|- ..
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~-~l~~----~l--~g~-------------~~-------- 60 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRP-RLNE----II--AKN-------------KS-------- 60 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGG-GHHH----HH--HSC-------------CC--------
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccC-hhhH----HH--cCC-------------CC--------
Confidence 3569999965 688899999888999999999876443221 0100 01 000 00
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
...+.. . ..+.+.+.|++++.+++|++++.++. .|++++|+++.+|.||-|.|..
T Consensus 61 ~~~l~~--------~-------~~~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~~ 115 (385)
T 3klj_A 61 IDDILI--------K-------KNDWYEKNNIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGSI 115 (385)
T ss_dssp GGGTBS--------S-------CHHHHHHTTCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred HHHccC--------C-------CHHHHHHCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCCC
Confidence 000000 0 01223356899999999999876554 5667788899999999999963
No 152
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=97.68 E-value=6.1e-05 Score=80.56 Aligned_cols=36 Identities=36% Similarity=0.469 Sum_probs=31.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~ 145 (546)
+||||||||| +|+++|..|++.|++|+|||+....+
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~~GG 42 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGEVGG 42 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTTH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 5999999965 68889999999999999999987433
No 153
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.67 E-value=6.1e-05 Score=78.92 Aligned_cols=105 Identities=18% Similarity=0.197 Sum_probs=66.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCC--eEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGL--RVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~--rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
.|||||||| +|+++|..|+++|+ +|+|||+.+.....+. .++ ..+-.....
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~-~l~-----------------------~~~l~~~~~-- 55 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRP-PLS-----------------------KAYLKSGGD-- 55 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSG-GGG-----------------------TGGGGSCCC--
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCc-cCC-----------------------HHHHCCCCC--
Confidence 489999965 69999999999999 8999999874332211 000 000000000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
...+. .. ..+.+.+.+++++. ++++.++.+.. .|.+.+|+++.++.||-|+|..
T Consensus 56 -~~~~~--------~~-------~~~~~~~~~i~~~~-~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 56 -PNSLM--------FR-------PEKFFQDQAIELIS-DRMVSIDREGR--KLLLASGTAIEYGHLVLATGAR 109 (404)
T ss_dssp -TTSSB--------SS-------CHHHHHHTTEEEEC-CCEEEEETTTT--EEEESSSCEEECSEEEECCCEE
T ss_pred -HHHcc--------CC-------CHHHHHhCCCEEEE-EEEEEEECCCC--EEEECCCCEEECCEEEEeeCCC
Confidence 00000 00 01223356889988 89998865544 5667788899999999999963
No 154
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.67 E-value=3.2e-05 Score=80.21 Aligned_cols=103 Identities=16% Similarity=0.130 Sum_probs=64.7
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-||+||||| +|+++|..|++.| +|+|||+.+.+...+. .++ . .+ .|. +.+
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~~~~~-~l~-~---~~--~g~------------------~~~--- 59 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPYYSKP-MLS-H---YI--AGF------------------IPR--- 59 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCCCCST-THH-H---HH--TTS------------------SCG---
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCccccc-hhH-H---HH--hCC------------------CCH---
Confidence 599999965 6888999999999 9999999875432111 000 0 00 010 000
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
..+.. . . .+.+.+.|++++.+++++.++.+. ..|. .++++++++.||-|+|..
T Consensus 60 ~~~~~-~----------~----~~~~~~~~v~~~~g~~v~~id~~~--~~V~-~~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 60 NRLFP-Y----------S----LDWYRKRGIEIRLAEEAKLIDRGR--KVVI-TEKGEVPYDTLVLATGAR 112 (367)
T ss_dssp GGGCS-S----------C----HHHHHHHTEEEECSCCEEEEETTT--TEEE-ESSCEEECSEEEECCCEE
T ss_pred HHhcc-C----------C----HHHHHhCCcEEEECCEEEEEECCC--CEEE-ECCcEEECCEEEECCCCC
Confidence 00000 0 0 112234688999999998876543 3455 577889999999999964
No 155
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.67 E-value=2.4e-05 Score=79.46 Aligned_cols=43 Identities=12% Similarity=0.109 Sum_probs=34.9
Q ss_pred ccCCcEEEeCCCCCCCCCCCCCc--chhhHhhHHHHHHHHHHHHh
Q 009027 385 AAFNRILQFGDASGIQSPVSFGG--FGSLTRHLGRLSTGVYEAVR 427 (546)
Q Consensus 385 ~~~~rvlLVGDAA~~v~Plsg~G--~g~~lrd~~~Lae~I~~Al~ 427 (546)
+.-++++.+||||..++++...| ||.|+.+..+.|+.|.++|.
T Consensus 281 t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 281 AGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 34578999999999999987767 67777777777888888775
No 156
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.66 E-value=7.4e-05 Score=82.24 Aligned_cols=110 Identities=17% Similarity=0.125 Sum_probs=71.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhC--CCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~--G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
..||+||||| +|+++|..|+++ |++|+|+|+.+..+..++ .+... -.|. +.
T Consensus 36 ~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~------~lp~~-~~g~------------------~~- 89 (588)
T 3ics_A 36 SRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANC------GLPYY-IGGV------------------IT- 89 (588)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG------GHHHH-HTTS------------------SC-
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCC------CCchh-hcCc------------------CC-
Confidence 5799999965 699999999988 999999999876442211 00000 0000 00
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEE-cCCc--EEEcCEEEEecCCC
Q 009027 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNF 260 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~-~~g~--~i~ArlVV~ADG~~ 260 (546)
....+ + ...+...+.+.|++++.+++|++++.++..+.+.. .+|+ +++++.||-|.|..
T Consensus 90 -~~~~~-----~---------~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (588)
T 3ics_A 90 -ERQKL-----L---------VQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAK 151 (588)
T ss_dssp -CGGGG-----B---------SSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -ChHHh-----h---------ccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCC
Confidence 00000 0 01112223356899999999999988777777764 3455 78999999999963
No 157
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=97.64 E-value=3.7e-05 Score=82.04 Aligned_cols=56 Identities=11% Similarity=0.052 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEe--CCeE-EEEEcCCcEEEcCEEEEecCCChH
Q 009027 206 KLIEIVKKRFISLGGVIFEGYSVSSICTY--ENAA-VLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~--~dgv-~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
.+-+.|.+.+++.|++++.+++|+++..+ ++.+ .|.+ +|++++|+.||.|.|..+.
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 46677788888889999999999999988 6665 3555 6788999999999998864
No 158
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.64 E-value=3.4e-05 Score=80.77 Aligned_cols=104 Identities=14% Similarity=0.099 Sum_probs=64.9
Q ss_pred ccEEEEcch-HHHHHHHHHHh---CCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 111 FDVIVCGGT-LGIFIATALSF---KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~---~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
.||+||||| +|+++|..|++ .|++|+|||+++.......+ . .......
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~----------------~----------~~~~~~~-- 53 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPAL----------------P----------HVAIGVR-- 53 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSS----------------C----------CCCSSCC--
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccch----------------h----------hcccCCc--
Confidence 479999975 69999999999 89999999988732110000 0 0000000
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCc----EEEcCEEEEecCCCh
Q 009027 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGK----ILSSHLIIDAMGNFS 261 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~----~i~ArlVV~ADG~~S 261 (546)
....+ ...+.+.+.+.|++++.+ +|++++.++..++ +++++ +++++.||.|+|...
T Consensus 54 -~~~~~---------------~~~~~~~~~~~gv~~~~~-~v~~i~~~~~~V~--~~~g~~~~~~~~~d~lViAtG~~~ 113 (409)
T 3h8l_A 54 -DVDEL---------------KVDLSEALPEKGIQFQEG-TVEKIDAKSSMVY--YTKPDGSMAEEEYDYVIVGIGAHL 113 (409)
T ss_dssp -CCCCE---------------EEEHHHHTGGGTCEEEEC-EEEEEETTTTEEE--EECTTSCEEEEECSEEEECCCCEE
T ss_pred -CHHHH---------------HHHHHHHHhhCCeEEEEe-eEEEEeCCCCEEE--EccCCcccceeeCCEEEECCCCCc
Confidence 00000 011233444678999887 8888876555444 44443 599999999999854
No 159
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.64 E-value=0.00027 Score=75.19 Aligned_cols=98 Identities=20% Similarity=0.263 Sum_probs=75.1
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-+|+||||| .|+-+|..|++.|.+|.|+|+.+.+- . .
T Consensus 171 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l---------------------~---------------------~ 208 (455)
T 1ebd_A 171 KSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEIL---------------------S---------------------G 208 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS---------------------T---------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccc---------------------c---------------------c
Confidence 479999975 69999999999999999999875211 0 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEc---CCcEEEcCEEEEecCCChHH
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGKILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~---~g~~i~ArlVV~ADG~~S~v 263 (546)
.+ ..+.+.+.+.+.+.|++++.+++++++..+++++.|++. +++++.++.||.|.|.....
T Consensus 209 ------------~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 209 ------------FE-KQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp ------------SC-HHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEESC
T ss_pred ------------cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCccc
Confidence 00 123445566677889999999999999888777777764 34689999999999987643
No 160
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.63 E-value=1.8e-05 Score=83.64 Aligned_cols=105 Identities=20% Similarity=0.178 Sum_probs=65.8
Q ss_pred cccEEEEcch-HHHHHHHHHHh--CCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSF--KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~--~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
.+|||||||| +|+++|..|++ .|++|+|||+++....... +..+ ..|..+ .
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~-------~~~~-~~g~~~-------------~----- 55 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPA-------FPHL-AMGWRK-------------F----- 55 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGG-------HHHH-HHTCSC-------------G-----
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCC-------cchh-ccCccC-------------H-----
Confidence 3689999965 69999999999 8999999999864331100 0000 001110 0
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
..+..+ +.+.+.+.|++++. .+++.++.+.. .|.+++++++.++.||.|+|...
T Consensus 56 ---~~~~~~---------------~~~~~~~~gv~~~~-~~v~~id~~~~--~v~~~~g~~i~~d~liiAtG~~~ 109 (430)
T 3h28_A 56 ---EDISVP---------------LAPLLPKFNIEFIN-EKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp ---GGSEEE---------------STTTGGGGTEEEEC-SCEEEEETTTT--EEEETTCCEEECSEEEECCCCEE
T ss_pred ---HHHHHH---------------HHHHHHhcCCEEEE-EEEEEEECCCC--EEEECCCcEEECCEEEEcCCccc
Confidence 000000 01122346788876 48888765443 56777888899999999999864
No 161
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.62 E-value=0.00031 Score=78.98 Aligned_cols=52 Identities=10% Similarity=0.159 Sum_probs=40.4
Q ss_pred HHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEc---CCcEEEcCEEEEecCCCh
Q 009027 208 IEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 208 ~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~---~g~~i~ArlVV~ADG~~S 261 (546)
...+.+.+.+.|++++.+++|+++. ++++.+... +++++.|+.||-|.|...
T Consensus 570 ~~~l~~~l~~~GV~i~~~~~V~~i~--~~~~~v~~~~~~~~~~i~aD~VV~A~G~~p 624 (690)
T 3k30_A 570 VNRIQRRLIENGVARVTDHAVVAVG--AGGVTVRDTYASIERELECDAVVMVTARLP 624 (690)
T ss_dssp HHHHHHHHHHTTCEEEESEEEEEEE--TTEEEEEETTTCCEEEEECSEEEEESCEEE
T ss_pred HHHHHHHHHHCCCEEEcCcEEEEEE--CCeEEEEEccCCeEEEEECCEEEECCCCCC
Confidence 4567778888999999999999875 456666542 345899999999999653
No 162
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.62 E-value=0.00013 Score=78.13 Aligned_cols=116 Identities=14% Similarity=0.096 Sum_probs=62.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhC--CCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~--G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
+.||+||||| +|+++|..|+++ |++|+|||+.+.....++ |+.. +-...+.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~--------------gl~~-----------~~~g~~~- 56 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGC--------------GIPY-----------YVSGEVS- 56 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccccccc--------------ccch-----------hhcCCCC-
Confidence 4699999965 799999999988 999999999875432111 1100 0000000
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEE-cCCc--EEEcCEEEEecCCC
Q 009027 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNF 260 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~-~~g~--~i~ArlVV~ADG~~ 260 (546)
....+. +. +..+...+...+...|++++.+++|++++..+..+.+.. .+|. +++++.||.|.|..
T Consensus 57 -~~~~~~-~~-------~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 124 (472)
T 3iwa_A 57 -NIESLQ-AT-------PYNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSK 124 (472)
T ss_dssp ---------------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -chHHhc-cc-------cchhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCC
Confidence 000000 00 000111111222246889999999999987777777764 2354 89999999999963
No 163
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.62 E-value=0.00034 Score=74.82 Aligned_cols=98 Identities=17% Similarity=0.221 Sum_probs=74.3
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.|+|+.+.+...
T Consensus 184 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 221 (478)
T 1v59_A 184 KRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS------------------------------------------ 221 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS------------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc------------------------------------------
Confidence 369999976 6999999999999999999987521100
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEE--eCCeEEEEEc-----CCcEEEcCEEEEecCCChH
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICT--YENAAVLLLA-----EGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~--~~dgv~V~~~-----~g~~i~ArlVV~ADG~~S~ 262 (546)
.+ ..+.+.+.+.+++.|++++.+++++++.. +++.+.|.++ +++++.++.||.|.|....
T Consensus 222 ------------~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 288 (478)
T 1v59_A 222 ------------MD-GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPY 288 (478)
T ss_dssp ------------SC-HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEEC
T ss_pred ------------cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcC
Confidence 00 13445566677788999999999999987 5566777765 3468999999999997765
Q ss_pred H
Q 009027 263 V 263 (546)
Q Consensus 263 v 263 (546)
.
T Consensus 289 ~ 289 (478)
T 1v59_A 289 I 289 (478)
T ss_dssp C
T ss_pred C
Confidence 4
No 164
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=97.61 E-value=7.7e-05 Score=80.50 Aligned_cols=108 Identities=20% Similarity=0.245 Sum_probs=72.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
++||+||||| +|+++|..|+++ ++|+|||+.+.++..... . .+ ....+
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~-~-------------------------~~--~~~g~-- 156 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWL-K-------------------------GI--KQEGF-- 156 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGG-T-------------------------CS--EETTT--
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeec-c-------------------------cc--ccCCC--
Confidence 5899999965 699999999999 999999998754421000 0 00 00000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEE-cCCc--EEEcCEEEEecCCCh
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNFS 261 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~-~~g~--~i~ArlVV~ADG~~S 261 (546)
+. +...+...+.+.+ +.|++++.++++.++..+++.+.+.. ++++ +++++.||-|.|...
T Consensus 157 ------~~------~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 157 ------NK------DSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp ------TE------EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEE
T ss_pred ------CC------CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCc
Confidence 00 2233444444444 56889999999999887777665544 3454 799999999999653
No 165
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.61 E-value=0.00042 Score=72.67 Aligned_cols=105 Identities=16% Similarity=0.245 Sum_probs=80.1
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++|+.+.+-. .
T Consensus 154 ~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~------------------------------------------~- 190 (415)
T 3lxd_A 154 NAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA------------------------------------------R- 190 (415)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT------------------------------------------T-
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh------------------------------------------h-
Confidence 58999976 699999999999999999997753110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeE-EEEEcCCcEEEcCEEEEecCCChH--HHHHh
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSP--VVKQI 267 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~~g~~i~ArlVV~ADG~~S~--vr~ql 267 (546)
. . ...+.+.+.+.+++.|++++.+++++++..+++.+ .|.+++|+++.|++||-|.|.... +.+.+
T Consensus 191 ------~----~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~~~l~~~~ 259 (415)
T 3lxd_A 191 ------V----A-GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPCVGALISA 259 (415)
T ss_dssp ------T----S-CHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEESCHHHHHT
T ss_pred ------h----c-CHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccChHHHHhC
Confidence 0 0 02344566677778899999999999998776665 588888999999999999998654 55565
Q ss_pred cCC
Q 009027 268 RSG 270 (546)
Q Consensus 268 ~~~ 270 (546)
++.
T Consensus 260 gl~ 262 (415)
T 3lxd_A 260 GAS 262 (415)
T ss_dssp TCC
T ss_pred CCC
Confidence 544
No 166
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.61 E-value=0.00013 Score=78.63 Aligned_cols=31 Identities=23% Similarity=0.349 Sum_probs=28.0
Q ss_pred cccEEEEcch-HHHHHHHHHHh-CCCeEEEEcC
Q 009027 110 TFDVIVCGGT-LGIFIATALSF-KGLRVAIVER 140 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~-~G~rVlLlEr 140 (546)
+|||+||||| +|+++|..|++ .|++|+|||+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 6999999965 68889999999 9999999993
No 167
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.58 E-value=0.00054 Score=73.18 Aligned_cols=106 Identities=17% Similarity=0.235 Sum_probs=81.7
Q ss_pred ccEEEEcch-HHHHHHHHHHhC-CCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 111 FDVIVCGGT-LGIFIATALSFK-GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~-G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
-.|+||||| .|+-+|..|++. |.+|.++|+.+..-..
T Consensus 160 ~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~----------------------------------------- 198 (472)
T 3iwa_A 160 SKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG----------------------------------------- 198 (472)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc-----------------------------------------
Confidence 369999975 699999999999 9999999976421000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh--HHHHH
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS--PVVKQ 266 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S--~vr~q 266 (546)
. .+ ..+.+.+.+.+++.|++++.+++++++..+++.++|.+++|+++.|+.||-|.|... .+.+.
T Consensus 199 --~----------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~~l~~~ 265 (472)
T 3iwa_A 199 --F----------TS-KSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPNTQLARD 265 (472)
T ss_dssp --T----------SC-HHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEECCHHHHH
T ss_pred --c----------cC-HHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcCHHHHHh
Confidence 0 00 134556677777889999999999999887778888888888999999999999853 46666
Q ss_pred hcCC
Q 009027 267 IRSG 270 (546)
Q Consensus 267 l~~~ 270 (546)
+++.
T Consensus 266 ~gl~ 269 (472)
T 3iwa_A 266 AGLE 269 (472)
T ss_dssp HTCC
T ss_pred CCcc
Confidence 6654
No 168
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.57 E-value=6e-05 Score=79.20 Aligned_cols=105 Identities=17% Similarity=0.240 Sum_probs=68.4
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCe--EEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLR--VAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~r--VlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
.||+||||| +|+++|..|+++|++ |+|+|+.+.....+. .++.. .......+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~-~l~~~------------------~~~g~~~~------ 57 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRP-SLSKA------------------VLDGSLER------ 57 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSG-GGGTH------------------HHHTSSSS------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCc-cccHH------------------HhCCCCCH------
Confidence 589999965 699999999999988 999999875442211 01100 00000000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
..+ . .. .+.+.+.|++++.+++++.++.+.. .|.+.+|+++.++.||-|+|..
T Consensus 58 --~~~-~--------~~-------~~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 58 --PPI-L--------AE-------ADWYGEARIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp --CCB-S--------SC-------TTHHHHTTCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEE
T ss_pred --HHh-c--------CC-------HHHHHHCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCc
Confidence 001 0 00 0112346899999999998865443 5667788899999999999965
No 169
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=97.55 E-value=3.5e-05 Score=82.66 Aligned_cols=53 Identities=11% Similarity=0.114 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCC
Q 009027 205 AKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGN 259 (546)
Q Consensus 205 ~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~ 259 (546)
..+-+.|.+.+.+.|++++.+++|+++..++.. +++.+|++++|+.||-+.-.
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~ 274 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAV 274 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCH
Confidence 346667777777789999999999999766654 45678999999999976543
No 170
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.55 E-value=0.00021 Score=75.06 Aligned_cols=104 Identities=15% Similarity=0.165 Sum_probs=67.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCe--EEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLR--VAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~r--VlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
.+||+||||| +|+++|..|+++|++ |+|+|+.+.....+. .++.. ...... .
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-~~~~~------------------~~~~~~-~----- 61 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRP-PLSKD------------------FMAHGD-A----- 61 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSG-GGGTH------------------HHHHCC-G-----
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCC-CCCHH------------------HhCCCc-h-----
Confidence 6899999965 689999999999984 999998864332111 01100 000000 0
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
..+. +. .+.+.|++++.+++|+.++.+. ..|++++|++++++.||.|+|...
T Consensus 62 ---~~~~--------~~----------~~~~~~v~~~~~~~v~~i~~~~--~~v~~~~g~~~~~d~lviAtG~~~ 113 (408)
T 2gqw_A 62 ---EKIR--------LD----------CKRAPEVEWLLGVTAQSFDPQA--HTVALSDGRTLPYGTLVLATGAAP 113 (408)
T ss_dssp ---GGSB--------CC----------CTTSCSCEEEETCCEEEEETTT--TEEEETTSCEEECSEEEECCCEEE
T ss_pred ---hhhh--------HH----------HHHHCCCEEEcCCEEEEEECCC--CEEEECCCCEEECCEEEECCCCCC
Confidence 0000 11 2235688999999999886543 356677788999999999999754
No 171
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.54 E-value=5.3e-05 Score=81.85 Aligned_cols=34 Identities=35% Similarity=0.544 Sum_probs=30.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
+||||||||| +|+++|..|++.|++|+|||+...
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 36 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSRL 36 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSST
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCc
Confidence 5899999965 688899999999999999999864
No 172
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.53 E-value=0.00035 Score=75.85 Aligned_cols=34 Identities=35% Similarity=0.467 Sum_probs=30.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
++|||||||| +|+++|..|++.|++|+|||+...
T Consensus 43 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 77 (523)
T 1mo9_A 43 EYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF 77 (523)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 6999999965 688999999999999999999873
No 173
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.53 E-value=0.00012 Score=80.04 Aligned_cols=37 Identities=24% Similarity=0.311 Sum_probs=31.0
Q ss_pred CCCcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 107 AVGTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 107 ~~~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
.+.+||||||||| .|..+|..+|+.|.||+|||+...
T Consensus 39 ~~ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~ 76 (542)
T 4b1b_A 39 HTYDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKP 76 (542)
T ss_dssp CCSSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCC
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCeEEEEecccc
Confidence 3447999999965 577888899999999999997654
No 174
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.51 E-value=0.00019 Score=76.76 Aligned_cols=34 Identities=38% Similarity=0.589 Sum_probs=30.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
+|||+||||| +|+++|..|++.|++|+|||+...
T Consensus 4 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 38 (463)
T 2r9z_A 4 HFDLIAIGGGSGGLAVAEKAAAFGKRVALIESKAL 38 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCCCC
Confidence 6999999965 688999999999999999999854
No 175
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=97.50 E-value=0.0002 Score=74.42 Aligned_cols=106 Identities=10% Similarity=0.055 Sum_probs=64.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCC--CeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKG--LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G--~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
+||||||||| +|+++|..|+++| .+|+|+|++......+. .+.. .+
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~g~~~~~~--------------------~l~~----~~------- 52 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADDGRSYSKP--------------------MLST----GF------- 52 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSCCCEECGG--------------------GGGG----TT-------
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCCCCccCcc--------------------cccH----HH-------
Confidence 5899999965 6888999999999 56899998752110000 0000 00
Q ss_pred cCCccccccccccceeCHHHHHH-HHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 187 EGKGEIWVEDILNLGVSPAKLIE-IVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~-~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
... .....+.. .+.+.+.+.|++++.+++++.++.++. .|.+. +.+++++.||.|+|...
T Consensus 53 ~~~------------~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~--~v~~~-~~~~~~d~lviAtG~~p 113 (384)
T 2v3a_A 53 SKN------------KDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQ--RIWIG-EEEVRYRDLVLAWGAEP 113 (384)
T ss_dssp TTT------------CCHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGGT--EEEET-TEEEECSEEEECCCEEE
T ss_pred hCC------------CCHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCCC--EEEEC-CcEEECCEEEEeCCCCc
Confidence 000 00111111 122233456899999988888765443 45554 44799999999999754
No 176
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.48 E-value=0.00048 Score=74.73 Aligned_cols=105 Identities=18% Similarity=0.234 Sum_probs=80.1
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.++|+.+..- . .
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l---------------------~---------------------~ 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK---------------------L---------------------I 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT---------------------T---------------------C
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc---------------------c---------------------c
Confidence 469999976 69999999999999999999775210 0 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe----EEEEEcCCc-EEEcCEEEEecCCChHH-
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA----AVLLLAEGK-ILSSHLIIDAMGNFSPV- 263 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg----v~V~~~~g~-~i~ArlVV~ADG~~S~v- 263 (546)
.+ ..+.+.|.+.+++.|++++.+++|+++..++++ +.|++++|+ ++.|+.||-|.|..+..
T Consensus 253 ------------~~-~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~~ 319 (523)
T 1mo9_A 253 ------------KD-NETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRSA 319 (523)
T ss_dssp ------------CS-HHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECCH
T ss_pred ------------cc-HHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCCc
Confidence 00 123455677777889999999999999876666 778887887 89999999999987653
Q ss_pred --HHHhcCC
Q 009027 264 --VKQIRSG 270 (546)
Q Consensus 264 --r~ql~~~ 270 (546)
.+.+++.
T Consensus 320 ~~l~~~gl~ 328 (523)
T 1mo9_A 320 ELAKILGLD 328 (523)
T ss_dssp HHHHHHTCC
T ss_pred cCHHHcCCc
Confidence 4566543
No 177
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.48 E-value=0.0019 Score=71.03 Aligned_cols=34 Identities=24% Similarity=0.374 Sum_probs=29.9
Q ss_pred CCcccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCC
Q 009027 108 VGTFDVIVCGG-TLGIFIATALSFKGLRVAIVERN 141 (546)
Q Consensus 108 ~~~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~ 141 (546)
..+|||+|||| ++|+++|..|+++|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 44799999996 56889999999999999999974
No 178
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=97.48 E-value=0.00035 Score=74.07 Aligned_cols=97 Identities=15% Similarity=0.215 Sum_probs=72.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
..+|+||||| .|+.+|..|++.|.+|.|+|+.+.+... +
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------~--------- 188 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV-------------------------------Y--------- 188 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-------------------------------T---------
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc-------------------------------c---------
Confidence 4689999965 6999999999999999999987521100 0
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeE-EEEEcCCcEEEcCEEEEecCCChH
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
.+ ..+.+.+.+.+.+.|++++.+++++++..+ +.+ .|.+ ++.++.++.||.|.|..+.
T Consensus 189 -------------~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 189 -------------LD-KEFTDVLTEEMEANNITIATGETVERYEGD-GRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp -------------CC-HHHHHHHHHHHHTTTEEEEESCCEEEEECS-SBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred -------------CC-HHHHHHHHHHHHhCCCEEEcCCEEEEEEcc-CcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 00 134456677778889999999999998755 433 4555 5678999999999997764
No 179
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.46 E-value=0.00036 Score=73.22 Aligned_cols=106 Identities=16% Similarity=0.213 Sum_probs=79.5
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.++|+.+.+- +..
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l--------~~~--------------------------------- 182 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELL--------VRV--------------------------------- 182 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS--------HHH---------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc--------hhh---------------------------------
Confidence 369999976 69999999999999999999775211 000
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH--HHHHh
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP--VVKQI 267 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~--vr~ql 267 (546)
++ ..+.+.+.+.+++.|++++.+++++++..++....|.+++|+++.|++||-|.|..+. +.+.+
T Consensus 183 ------------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~~~l~~~~ 249 (410)
T 3ef6_A 183 ------------LG-RRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPADQLARQA 249 (410)
T ss_dssp ------------HC-HHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEECCHHHHHT
T ss_pred ------------cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeecHHHHHhC
Confidence 00 1234556667777899999999999987655445688888999999999999998654 56666
Q ss_pred cCC
Q 009027 268 RSG 270 (546)
Q Consensus 268 ~~~ 270 (546)
++.
T Consensus 250 gl~ 252 (410)
T 3ef6_A 250 GLA 252 (410)
T ss_dssp TCC
T ss_pred CCc
Confidence 544
No 180
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.43 E-value=0.00084 Score=70.94 Aligned_cols=105 Identities=15% Similarity=0.228 Sum_probs=77.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++|+.+.+-. .
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~------------ 187 (431)
T 1q1r_A 151 RLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE-------------------------------R------------ 187 (431)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT-------------------------------T------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc-------------------------------c------------
Confidence 69999975 699999999999999999998642110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEE--eCCeE-EEEEcCCcEEEcCEEEEecCCCh--HHHH
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICT--YENAA-VLLLAEGKILSSHLIIDAMGNFS--PVVK 265 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~--~~dgv-~V~~~~g~~i~ArlVV~ADG~~S--~vr~ 265 (546)
. ++ ..+.+.+.+.+++.|++++.+++++++.. +++.+ .|.+++|+++.|++||.|.|..+ .+.+
T Consensus 188 ~----------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~~~l~~ 256 (431)
T 1q1r_A 188 V----------TA-PPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPNCELAS 256 (431)
T ss_dssp T----------SC-HHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEECCHHHH
T ss_pred h----------hh-HHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcCcchhh
Confidence 0 00 12334556667778999999999999986 44555 67788888999999999999653 4666
Q ss_pred HhcCC
Q 009027 266 QIRSG 270 (546)
Q Consensus 266 ql~~~ 270 (546)
.+++.
T Consensus 257 ~~gl~ 261 (431)
T 1q1r_A 257 AAGLQ 261 (431)
T ss_dssp HTTCC
T ss_pred ccCCC
Confidence 66543
No 181
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.42 E-value=0.0011 Score=71.15 Aligned_cols=97 Identities=16% Similarity=0.198 Sum_probs=74.0
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++|+.+.+-. .
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~------------ 223 (479)
T 2hqm_A 187 KVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-------------------------------K------------ 223 (479)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------------------T------------
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-------------------------------c------------
Confidence 59999976 699999999999999999998752110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe--EEEEEcCC-cEEEcCEEEEecCCChHH
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAEG-KILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg--v~V~~~~g-~~i~ArlVV~ADG~~S~v 263 (546)
++ ..+.+.+.+.+++.|++++.+++++++..++++ +.|++++| +++.++.||.|.|.....
T Consensus 224 -----------~d-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 224 -----------FD-ECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp -----------SC-HHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEECC
T ss_pred -----------cC-HHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCcc
Confidence 00 123345566667789999999999999876555 77888888 789999999999976654
No 182
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.42 E-value=0.0003 Score=74.99 Aligned_cols=34 Identities=24% Similarity=0.351 Sum_probs=29.9
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
+|||+||||| +|+++|..|++.|++|+|||+...
T Consensus 5 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~ 39 (458)
T 1lvl_A 5 QTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQAL 39 (458)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCEEEEEccCCC
Confidence 6999999965 688899999999999999999544
No 183
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.42 E-value=0.00068 Score=72.27 Aligned_cols=103 Identities=13% Similarity=0.193 Sum_probs=76.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++|+.+..-. .
T Consensus 176 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~------------ 212 (468)
T 2qae_A 176 TMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP-------------------------------T------------ 212 (468)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------T------------
T ss_pred eEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc-------------------------------c------------
Confidence 68999976 699999999999999999998752100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHH-HhcCCEEEeCceEEEEEEeCCeEEEEEc--CC--cEEEcCEEEEecCCChHH--
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRF-ISLGGVIFEGYSVSSICTYENAAVLLLA--EG--KILSSHLIIDAMGNFSPV-- 263 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a-~~~G~~v~~~t~v~~i~~~~dgv~V~~~--~g--~~i~ArlVV~ADG~~S~v-- 263 (546)
++ ..+.+.+.+.+ ++.|++++.+++++++..+++++.|.++ +| +++.++.||-|.|..+..
T Consensus 213 -----------~d-~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~~~~ 280 (468)
T 2qae_A 213 -----------LD-EDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPFTGG 280 (468)
T ss_dssp -----------SC-HHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEECCTT
T ss_pred -----------CC-HHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccCCCC
Confidence 00 12345566677 7889999999999999887777777775 56 589999999999987653
Q ss_pred --HHHhcC
Q 009027 264 --VKQIRS 269 (546)
Q Consensus 264 --r~ql~~ 269 (546)
.+.+++
T Consensus 281 l~l~~~gl 288 (468)
T 2qae_A 281 LGLDKINV 288 (468)
T ss_dssp SCHHHHTC
T ss_pred CCchhcCC
Confidence 455554
No 184
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.39 E-value=0.00017 Score=78.67 Aligned_cols=109 Identities=10% Similarity=0.030 Sum_probs=68.7
Q ss_pred ccEEEEcch-HHHHHHHHHHhC--CCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 111 FDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~--G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
.||+||||| +|+++|..|+++ |++|+|+|+.+.....+. .+ ... .......
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~-~l-----~~~--------------~~~~~~~------ 55 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANC-GL-----PYH--------------ISGEIAQ------ 55 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGG-GH-----HHH--------------HTSSSCC------
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccccc-Cc-----hHH--------------hcCCcCC------
Confidence 489999965 699999999988 899999999876542211 00 000 0000000
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEE-cCCc--EEEcCEEEEecCCC
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL-AEGK--ILSSHLIIDAMGNF 260 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~-~~g~--~i~ArlVV~ADG~~ 260 (546)
..... .. .+...+...|++++.+++|++++.+...+.+.. .+|+ +++++.||-|.|..
T Consensus 56 -~~~~~--------~~------~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 56 -RSALV--------LQ------TPESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp -GGGGB--------CC------CHHHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -hHHhh--------cc------CHHHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCC
Confidence 00000 00 001112235889999999999988777777764 2343 79999999999974
No 185
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.38 E-value=0.001 Score=71.02 Aligned_cols=105 Identities=10% Similarity=0.168 Sum_probs=77.5
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.|+|+.+..-..
T Consensus 180 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------- 216 (474)
T 1zmd_A 180 KMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV------------------------------------------- 216 (474)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS-------------------------------------------
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc-------------------------------------------
Confidence 69999975 6999999999999999999987521100
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe-EEEEE-----cCCcEEEcCEEEEecCCChHH-
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLL-----AEGKILSSHLIIDAMGNFSPV- 263 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~-----~~g~~i~ArlVV~ADG~~S~v- 263 (546)
. ++ ..+.+.+.+.+++.|++++.+++++++..++++ +.|++ .+++++.++.||.|.|..+..
T Consensus 217 ~----------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~~ 285 (474)
T 1zmd_A 217 G----------ID-MEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFTK 285 (474)
T ss_dssp S----------CC-HHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECCT
T ss_pred c----------cC-HHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCCC
Confidence 0 00 123345666777889999999999999877766 77764 345689999999999977543
Q ss_pred ---HHHhcCC
Q 009027 264 ---VKQIRSG 270 (546)
Q Consensus 264 ---r~ql~~~ 270 (546)
.+.+++.
T Consensus 286 ~l~l~~~g~~ 295 (474)
T 1zmd_A 286 NLGLEELGIE 295 (474)
T ss_dssp TSSHHHHTCC
T ss_pred cCCchhcCCc
Confidence 4555543
No 186
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.37 E-value=0.00045 Score=80.65 Aligned_cols=108 Identities=17% Similarity=0.182 Sum_probs=67.0
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
+|||||||| ++|+++|..|+++|++|+|||+.+.++. +.++. +. ..+ .+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG-~~~~~--------------~k-------------~~i--~~ 177 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGG-TLLDT--------------AG-------------EQI--DG 177 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSG-GGGGS--------------SC-------------CEE--TT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCc-eeccC--------------Cc-------------ccc--CC
Confidence 589999995 5799999999999999999999865431 00000 00 000 00
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEeCCeEEE---------EE------cCCcEEEcCE
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAAVL---------LL------AEGKILSSHL 252 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~dgv~V---------~~------~~g~~i~Arl 252 (546)
.....+...+.+.+.+. +++++.+++|.++..++....+ .. .++.++++|.
T Consensus 178 -------------~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~ 244 (965)
T 2gag_A 178 -------------MDSSAWIEQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQ 244 (965)
T ss_dssp -------------EEHHHHHHHHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEE
T ss_pred -------------CCHHHHHHHHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCE
Confidence 01123334455556554 8899999999887532211111 11 0123799999
Q ss_pred EEEecCCC
Q 009027 253 IIDAMGNF 260 (546)
Q Consensus 253 VV~ADG~~ 260 (546)
||-|.|..
T Consensus 245 lVlATGs~ 252 (965)
T 2gag_A 245 VVLATGAH 252 (965)
T ss_dssp EEECCCEE
T ss_pred EEECCCCc
Confidence 99999974
No 187
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.36 E-value=0.0013 Score=70.95 Aligned_cols=97 Identities=15% Similarity=0.189 Sum_probs=74.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.|+|+.+.+-. .
T Consensus 178 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~------------ 214 (500)
T 1onf_A 178 KIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-------------------------------K------------ 214 (500)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-------------------------------T------------
T ss_pred eEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-------------------------------c------------
Confidence 69999976 699999999999999999997652110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe-EEEEEcCCcE-EEcCEEEEecCCChHH
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLLLAEGKI-LSSHLIIDAMGNFSPV 263 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~~~~g~~-i~ArlVV~ADG~~S~v 263 (546)
++ ..+.+.+.+.+++.|++++.+++++++..++++ +.|.+++|++ +.++.||-|.|.....
T Consensus 215 -----------~d-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 215 -----------FD-ESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred -----------cc-hhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 00 123345566777889999999999999876544 7788888887 9999999999987654
No 188
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.36 E-value=0.00018 Score=77.71 Aligned_cols=31 Identities=32% Similarity=0.434 Sum_probs=27.9
Q ss_pred cccEEEEcch-HHHHHHHHHHh-CCCeEEEEcC
Q 009027 110 TFDVIVCGGT-LGIFIATALSF-KGLRVAIVER 140 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~-~G~rVlLlEr 140 (546)
+|||+||||| +|+++|..|++ .|++|+|||+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 6999999965 68889999999 9999999994
No 189
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.34 E-value=0.0014 Score=68.72 Aligned_cols=102 Identities=19% Similarity=0.331 Sum_probs=76.3
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.++|+.+.+-.. .
T Consensus 146 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------~------------------------ 184 (408)
T 2gqw_A 146 SRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR-----------------A------------------------ 184 (408)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------T------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc-----------------c------------------------
Confidence 469999976 6999999999999999999987521100 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh--HHHHHh
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS--PVVKQI 267 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S--~vr~ql 267 (546)
++ ..+.+.+.+.+++.|++++.+++++++. ++ .|++++|+++.++.||-|.|... .+.+.+
T Consensus 185 ------------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~~p~~~l~~~~ 247 (408)
T 2gqw_A 185 ------------AP-ATLADFVARYHAAQGVDLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIGVLANDALARAA 247 (408)
T ss_dssp ------------SC-HHHHHHHHHHHHHTTCEEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSCEEECCHHHHHH
T ss_pred ------------cC-HHHHHHHHHHHHHcCcEEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcCCCccHHHHHhC
Confidence 00 1234556667778899999999999987 34 66777888999999999999764 456666
Q ss_pred cCC
Q 009027 268 RSG 270 (546)
Q Consensus 268 ~~~ 270 (546)
++.
T Consensus 248 gl~ 250 (408)
T 2gqw_A 248 GLA 250 (408)
T ss_dssp TCC
T ss_pred CCC
Confidence 554
No 190
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.31 E-value=0.001 Score=71.31 Aligned_cols=98 Identities=15% Similarity=0.129 Sum_probs=76.1
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.|+|+.+..-. .
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~----------- 223 (482)
T 1ojt_A 186 GKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-------------------------------G----------- 223 (482)
T ss_dssp SEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-------------------------------T-----------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-------------------------------c-----------
Confidence 369999976 699999999999999999997752100 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcC----CcEEEcCEEEEecCCChHH
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE----GKILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~----g~~i~ArlVV~ADG~~S~v 263 (546)
.+ ..+.+.+.+.+++.|++++.++++.++..+++++.|++++ |+++.++.||-|.|.....
T Consensus 224 ------------~~-~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 224 ------------AD-RDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp ------------SC-HHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred ------------cC-HHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 00 1233455667778899999999999998888788888776 6789999999999987654
No 191
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.30 E-value=0.00032 Score=75.67 Aligned_cols=43 Identities=19% Similarity=0.269 Sum_probs=35.0
Q ss_pred hcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 217 SLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 217 ~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
+.|++++.+++|++++..+. +|.+++|+++.++.||.|+|...
T Consensus 102 ~~gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs~p 144 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGGTP 144 (493)
T ss_dssp TCEEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCEEE
T ss_pred cCCeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCC
Confidence 46889999999998875543 56677888999999999999753
No 192
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.30 E-value=0.0011 Score=71.30 Aligned_cols=98 Identities=12% Similarity=0.153 Sum_probs=75.8
Q ss_pred ccEEEEcch-HHHHHHHHHHhC---CCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 111 FDVIVCGGT-LGIFIATALSFK---GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~---G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
-.|+||||| .|+-+|..|++. |.+|.++|+.+..- . .
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l---------------------~----------~-------- 228 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMIL---------------------R----------G-------- 228 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSS---------------------T----------T--------
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcc---------------------c----------c--------
Confidence 369999976 699999999998 99999999875210 0 0
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCC-eEEEEEcCCcEEEcCEEEEecCCChHH
Q 009027 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d-gv~V~~~~g~~i~ArlVV~ADG~~S~v 263 (546)
++ ..+.+.+.+.+++.|++++.+++++++..+++ .+.|++++|+++.++.||-|.|.....
T Consensus 229 ---------------~d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 229 ---------------FD-SELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPRS 290 (490)
T ss_dssp ---------------SC-HHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEESC
T ss_pred ---------------cC-HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcCc
Confidence 00 12345566677788999999999999987665 477888888899999999999987654
No 193
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.29 E-value=0.00017 Score=77.44 Aligned_cols=55 Identities=15% Similarity=0.106 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEE-eCCe-EEEEEcCCcEEEcCEEEEecCCC
Q 009027 206 KLIEIVKKRFISLGGVIFEGYSVSSICT-YENA-AVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~-~~dg-v~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
.|-+.|.+.+++.|++++.+++|+++.. +++. +.|.+.+|++++|+.||.|.|..
T Consensus 257 ~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 257 GIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 4666777888889999999999999988 4444 45778788899999999999977
No 194
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.29 E-value=0.0018 Score=69.47 Aligned_cols=97 Identities=18% Similarity=0.250 Sum_probs=74.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++|+.+..-. .
T Consensus 200 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------~- 236 (491)
T 3urh_A 200 SMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG------------------------------------------G- 236 (491)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS------------------------------------------S-
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc------------------------------------------c-
Confidence 58999976 699999999999999999987652100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcC---C--cEEEcCEEEEecCCChHH
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE---G--KILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~---g--~~i~ArlVV~ADG~~S~v 263 (546)
.+ ..+.+.+.+.+++.|++++.+++++++..+++++.|.+.+ | +++.++.||-|.|.....
T Consensus 237 -----------~d-~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 237 -----------MD-GEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred -----------CC-HHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 00 1234555667777899999999999999888888887753 4 589999999999986543
No 195
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.28 E-value=0.0017 Score=70.79 Aligned_cols=104 Identities=18% Similarity=0.296 Sum_probs=78.9
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++|+.+..-..
T Consensus 153 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------- 189 (565)
T 3ntd_A 153 HATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMTP------------------------------------------- 189 (565)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCTT-------------------------------------------
T ss_pred EEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccchh-------------------------------------------
Confidence 69999976 6999999999999999999986521000
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEe-------------------CCeEEEEEcCCcEEEcC
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY-------------------ENAAVLLLAEGKILSSH 251 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~-------------------~dgv~V~~~~g~~i~Ar 251 (546)
.+ ..+.+.+.+.+++.|++++.+++++++..+ ++.+.+.+.+|+++.|+
T Consensus 190 -----------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D 257 (565)
T 3ntd_A 190 -----------VD-REMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETD 257 (565)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEES
T ss_pred -----------cC-HHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcC
Confidence 00 123445566677889999999999999873 56778888888899999
Q ss_pred EEEEecCCCh--HHHHHhcCC
Q 009027 252 LIIDAMGNFS--PVVKQIRSG 270 (546)
Q Consensus 252 lVV~ADG~~S--~vr~ql~~~ 270 (546)
.||-|.|... .+.+.+++.
T Consensus 258 ~vi~a~G~~p~~~l~~~~g~~ 278 (565)
T 3ntd_A 258 LLIMAIGVRPETQLARDAGLA 278 (565)
T ss_dssp EEEECSCEEECCHHHHHHTCC
T ss_pred EEEECcCCccchHHHHhCCcc
Confidence 9999999854 355566544
No 196
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.28 E-value=0.0016 Score=69.07 Aligned_cols=96 Identities=19% Similarity=0.061 Sum_probs=74.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++|+.+..-. .
T Consensus 149 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------------------~ 185 (452)
T 3oc4_A 149 TVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP-------------------------------------------K 185 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------------------T
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc-------------------------------------------c
Confidence 59999976 699999999999999999998752100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
. ++ ..+.+.+.+.+++.|++++.+++++++...++++.|.++++ ++.|+.||-|.|....
T Consensus 186 ~----------~d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 186 Y----------FD-KEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp T----------CC-HHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCC
T ss_pred c----------CC-HHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCC
Confidence 0 00 12445667777788999999999999987778887888666 8999999999998643
No 197
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.27 E-value=0.002 Score=69.42 Aligned_cols=105 Identities=20% Similarity=0.187 Sum_probs=78.6
Q ss_pred cEEEEcch-HHHHHHHHHHh----CCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccc
Q 009027 112 DVIVCGGT-LGIFIATALSF----KGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGF 186 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~----~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f 186 (546)
.|+||||| .|+-+|..|++ .|.+|.++++.+.+- .
T Consensus 182 ~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~---------------------~------------------- 221 (493)
T 1m6i_A 182 SITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM---------------------G------------------- 221 (493)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT---------------------T-------------------
T ss_pred eEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc---------------------c-------------------
Confidence 59999976 69999998876 488999998653100 0
Q ss_pred cCCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH--HH
Q 009027 187 EGKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP--VV 264 (546)
Q Consensus 187 ~~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~--vr 264 (546)
..+ + ..+.+.+.+.+++.|++++.+++++++..+++.+.|.+++|+++.|++||-|.|.... +.
T Consensus 222 ---------~~l----~-~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn~~l~ 287 (493)
T 1m6i_A 222 ---------KIL----P-EYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELA 287 (493)
T ss_dssp ---------TTS----C-HHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEECCTTH
T ss_pred ---------ccC----C-HHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCccHHHH
Confidence 000 0 1344556677788899999999999998777778888888999999999999997653 56
Q ss_pred HHhcCC
Q 009027 265 KQIRSG 270 (546)
Q Consensus 265 ~ql~~~ 270 (546)
+.+++.
T Consensus 288 ~~~gl~ 293 (493)
T 1m6i_A 288 KTGGLE 293 (493)
T ss_dssp HHHTCC
T ss_pred HHcCCc
Confidence 666543
No 198
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.26 E-value=0.00078 Score=71.76 Aligned_cols=98 Identities=15% Similarity=0.190 Sum_probs=74.0
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.|+|+.+..-..
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~~------------------------------------------ 215 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVPT------------------------------------------ 215 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCccccc------------------------------------------
Confidence 369999976 6999999999999999999987521100
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEc---CC--cEEEcCEEEEecCCChHH
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EG--KILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~---~g--~~i~ArlVV~ADG~~S~v 263 (546)
.+ ..+.+.+.+.+++.|++++.+++++++..+++++.|+++ +| +++.++.||.|.|..+..
T Consensus 216 ------------~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 216 ------------MD-AEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp ------------SC-HHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred ------------cc-HHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 00 123455666777889999999999999876666777764 44 589999999999987643
No 199
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.25 E-value=0.0021 Score=68.33 Aligned_cols=104 Identities=22% Similarity=0.302 Sum_probs=76.9
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.|+|+.+..-. .
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~----------- 209 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP-------------------------------N----------- 209 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------T-----------
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc-------------------------------c-----------
Confidence 369999976 699999999999999999998752100 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEc-CC--cEEEcCEEEEecCCChHH---
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA-EG--KILSSHLIIDAMGNFSPV--- 263 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~-~g--~~i~ArlVV~ADG~~S~v--- 263 (546)
++ ..+.+.+.+.+++.|++++.+++++++..+++++.|.++ +| +++.++.||-|.|.....
T Consensus 210 ------------~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~~~~l 276 (464)
T 2a8x_A 210 ------------ED-ADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPNVEGY 276 (464)
T ss_dssp ------------SC-HHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEECCSSS
T ss_pred ------------cC-HHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCccCCCC
Confidence 00 123344566667789999999999999877767777775 56 589999999999976543
Q ss_pred -HHHhcC
Q 009027 264 -VKQIRS 269 (546)
Q Consensus 264 -r~ql~~ 269 (546)
.+.+++
T Consensus 277 ~~~~~gl 283 (464)
T 2a8x_A 277 GLDKAGV 283 (464)
T ss_dssp CHHHHTC
T ss_pred CchhcCC
Confidence 455544
No 200
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.25 E-value=0.0019 Score=68.70 Aligned_cols=95 Identities=22% Similarity=0.258 Sum_probs=74.2
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++|+.+.. | . +
T Consensus 178 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~---------------l------~------------------~---- 214 (467)
T 1zk7_A 178 RLAVIGSSVVALELAQAFARLGSKVTVLARNTLF---------------F------R------------------E---- 214 (467)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTT---------------T------T------------------S----
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEEECCcc---------------C------C------------------C----
Confidence 58999976 6999999999999999999976420 0 0 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChHH
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~v 263 (546)
+ ..+.+.+.+.+++.|++++.+++++++..+++.+.|.++ +.++.++.||-|.|..+..
T Consensus 215 ------------~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 215 ------------D-PAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPNT 273 (467)
T ss_dssp ------------C-HHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEESC
T ss_pred ------------C-HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcCC
Confidence 0 123455666777889999999999999887777777775 5589999999999987653
No 201
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.23 E-value=0.003 Score=66.87 Aligned_cols=96 Identities=18% Similarity=0.272 Sum_probs=72.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++|+.+..-.. .
T Consensus 151 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------~------------------------- 188 (452)
T 2cdu_A 151 TITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK-----------------Y------------------------- 188 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT-----------------T-------------------------
T ss_pred eEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh-----------------h-------------------------
Confidence 59999976 6999999999999999999986521000 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEE-EEEcCCcEEEcCEEEEecCCChH
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
++ ..+.+.+.+.+++.|++++.+++++++..+++.+. |.+ +|+++.|+.||-|.|....
T Consensus 189 -----------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~-~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 189 -----------FD-KEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTL-DGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEET-TSCEEEESEEEECCCEEEC
T ss_pred -----------hh-hhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEe-CCCEEECCEEEECcCCCCC
Confidence 00 12345566677788999999999999987666665 444 7789999999999997654
No 202
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.23 E-value=0.0022 Score=68.68 Aligned_cols=96 Identities=20% Similarity=0.243 Sum_probs=71.4
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
.-+|+||||| .|+-+|..|++.|.+|.|+|+.+.... .
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------~----------------------- 224 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT------------------I----------------------- 224 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS------------------S-----------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh------------------c-----------------------
Confidence 3579999976 699999999999999999997642100 0
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeE-EEEEcCCcEEEcCEEEEecCCChH
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
++ ..+.+.+.+.+++.|++++.+++++++..+ +.+ .|.+ ++.++.|+.||.|.|..+.
T Consensus 225 -------------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~-~~v~~v~~-~~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 225 -------------YD-GDMAEYIYKEADKHHIEILTNENVKAFKGN-ERVEAVET-DKGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp -------------SC-HHHHHHHHHHHHHTTCEEECSCCEEEEEES-SBEEEEEE-TTEEEECSEEEECSCEEES
T ss_pred -------------CC-HHHHHHHHHHHHHcCcEEEcCCEEEEEEcC-CcEEEEEE-CCCEEEcCEEEECcCCCcC
Confidence 00 123455667777889999999999998764 444 3555 4558999999999998653
No 203
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.22 E-value=0.0024 Score=63.70 Aligned_cols=92 Identities=16% Similarity=0.134 Sum_probs=67.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++.+.... .
T Consensus 147 ~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------~- 183 (320)
T 1trb_A 147 KVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA------------------------------------------E- 183 (320)
T ss_dssp EEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC------------------------------------------C-
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc------------------------------------------C-
Confidence 69999965 699999999999999999997642110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEE-EEEcC----C--cEEEcCEEEEecCCC
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLAE----G--KILSSHLIIDAMGNF 260 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~~----g--~~i~ArlVV~ADG~~ 260 (546)
..+.+.+.+.+.+.|++++.+++++++..+++.+. |.+++ | .++.++.||-|.|..
T Consensus 184 --------------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 184 --------------KILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp --------------HHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred --------------HHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 11233455667778999999999999987664432 55543 4 479999999998854
No 204
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.21 E-value=0.00021 Score=77.17 Aligned_cols=36 Identities=28% Similarity=0.440 Sum_probs=30.8
Q ss_pred CcccEEEEcch-HHHHHHHHHHh-CCCeEEEEcCCCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSF-KGLRVAIVERNTLK 144 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~-~G~rVlLlEr~~~~ 144 (546)
.+||+|||||| +|+.+|..|++ .|++|+|||+...+
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~~ 53 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEEP 53 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBCC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCCC
Confidence 37999999965 69999999997 78999999998653
No 205
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.21 E-value=0.0023 Score=68.95 Aligned_cols=97 Identities=21% Similarity=0.299 Sum_probs=74.7
Q ss_pred cEEEEcch-HHHHHHHHHHhC---CCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCccccc
Q 009027 112 DVIVCGGT-LGIFIATALSFK---GLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFE 187 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~---G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~ 187 (546)
.|+||||| .|+-+|..|++. |.+|.|+|+.+.+-. .
T Consensus 193 ~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-------------------------------~--------- 232 (495)
T 2wpf_A 193 RVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-------------------------------G--------- 232 (495)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT-------------------------------T---------
T ss_pred eEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc-------------------------------c---------
Confidence 69999976 699999999998 999999997642100 0
Q ss_pred CCccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCC-eEEEEEcCCcEEEcCEEEEecCCChHH
Q 009027 188 GKGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGKILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 188 ~~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d-gv~V~~~~g~~i~ArlVV~ADG~~S~v 263 (546)
++ ..+.+.+.+.+++.|++++.+++++++..+++ .+.|++++|+++.+++||-|.|.....
T Consensus 233 --------------~d-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 233 --------------FD-ETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPRT 294 (495)
T ss_dssp --------------SC-HHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEECC
T ss_pred --------------cC-HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCcccc
Confidence 00 12334556677788999999999999987654 477888888899999999999987654
No 206
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.17 E-value=0.0012 Score=70.39 Aligned_cols=96 Identities=21% Similarity=0.239 Sum_probs=70.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.|+|+.+.+...
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------------------ 209 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT------------------------------------------ 209 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT------------------------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc------------------------------------------
Confidence 369999975 6999999999999999999987521100
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCC--cEEEcCEEEEecCCChHH
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g--~~i~ArlVV~ADG~~S~v 263 (546)
.+ ..+.+.+.+.+.+.|++++.+++++++.. +.+.++..+| +++.++.||.|.|.....
T Consensus 210 ------------~~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~--~~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 210 ------------YD-SELTAPVAESLKKLGIALHLGHSVEGYEN--GCLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp ------------SC-HHHHHHHHHHHHHHTCEEETTCEEEEEET--TEEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred ------------cC-HHHHHHHHHHHHHCCCEEEECCEEEEEEe--CCEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 00 12334455666778999999999999875 3466664356 589999999999987643
No 207
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.15 E-value=0.00028 Score=73.90 Aligned_cols=35 Identities=31% Similarity=0.526 Sum_probs=31.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhC-CCeEEEEcCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFK-GLRVAIVERNTLK 144 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~-G~rVlLlEr~~~~ 144 (546)
++||+||||| .|+++|..|+++ |++|+|+|++..+
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHI 43 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCC
Confidence 6999999976 599999999998 9999999998644
No 208
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=97.13 E-value=0.00037 Score=72.89 Aligned_cols=43 Identities=7% Similarity=0.004 Sum_probs=36.5
Q ss_pred hcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 217 SLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 217 ~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
..+.+++.+++|++|..++++++|++.+|+ ++||.||-|.+..
T Consensus 215 ~l~~~v~~~~~V~~i~~~~~~v~v~~~~g~-~~ad~Vv~a~~~~ 257 (424)
T 2b9w_A 215 TLEHPAERNVDITRITREDGKVHIHTTDWD-RESDVLVLTVPLE 257 (424)
T ss_dssp HSSSCCBCSCCEEEEECCTTCEEEEESSCE-EEESEEEECSCHH
T ss_pred hhcceEEcCCEEEEEEEECCEEEEEECCCe-EEcCEEEECCCHH
Confidence 345688999999999988888998887775 9999999999865
No 209
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=97.13 E-value=0.00037 Score=73.16 Aligned_cols=36 Identities=33% Similarity=0.501 Sum_probs=31.7
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
.++||+||||| +|+++|..|+++|++|+|+|++...
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHI 64 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCC
Confidence 47999999976 5999999999999999999998654
No 210
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.11 E-value=0.0004 Score=74.26 Aligned_cols=52 Identities=15% Similarity=0.181 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCC---cEEEcCEEEEecCCC
Q 009027 207 LIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG---KILSSHLIIDAMGNF 260 (546)
Q Consensus 207 L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g---~~i~ArlVV~ADG~~ 260 (546)
|-+.|.+++.+ ++|+.+++|++|..++++++|++.+| ++++||.||.|....
T Consensus 241 l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 241 IYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHHHHHCG--GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHhcCC--CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 44445544421 68999999999999999999988776 589999999998753
No 211
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.10 E-value=0.0035 Score=67.37 Aligned_cols=96 Identities=21% Similarity=0.189 Sum_probs=73.2
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.++|+.+.... .
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------------~------------------------ 212 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN------------------L------------------------ 212 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT------------------C------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc------------------c------------------------
Confidence 369999975 699999999999999999998753110 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEc--CC--cEEEcCEEEEecCCChH
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA--EG--KILSSHLIIDAMGNFSP 262 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~--~g--~~i~ArlVV~ADG~~S~ 262 (546)
.+ ..+.+.+.+.+.+. ++++.+++++++..+++++.|++. +| +++.++.||-|.|....
T Consensus 213 ------------~d-~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 213 ------------QD-EEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp ------------CC-HHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred ------------CC-HHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 00 12334455555666 999999999999888888888875 56 58999999999998654
No 212
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.09 E-value=0.0036 Score=68.30 Aligned_cols=97 Identities=12% Similarity=0.147 Sum_probs=77.6
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.++||||| +|+=+|..+++.|.+|+|+++....+ .
T Consensus 225 ~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~-------------------------------------------~- 260 (542)
T 4b1b_A 225 KTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR-------------------------------------------G- 260 (542)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST-------------------------------------------T-
T ss_pred eEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc-------------------------------------------c-
Confidence 59999976 69999999999999999998643110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChHHH
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSPVV 264 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~vr 264 (546)
.| ..+-+.+.+.+++.|++++.++.+..+...++.+.|.+.++.++.++.|+.|.|+.-.+.
T Consensus 261 -----------~D-~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 261 -----------FD-QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCG
T ss_pred -----------cc-hhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 01 123345566777889999999999999999999999998888999999999999875543
No 213
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.06 E-value=0.00045 Score=73.15 Aligned_cols=57 Identities=16% Similarity=0.127 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH
Q 009027 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
.+-+.|.+.+++.|++++.+++|+++..+++++++...+|++++|+.||.|.|..+.
T Consensus 235 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 566778888888899999999999999888887643457889999999999999874
No 214
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.05 E-value=0.00034 Score=72.43 Aligned_cols=35 Identities=23% Similarity=0.401 Sum_probs=30.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
+|||+||||| .|+++|..|+++|++|+|+|++..+
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHI 36 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCC
Confidence 3799999976 5999999999999999999997654
No 215
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.03 E-value=0.00043 Score=74.25 Aligned_cols=57 Identities=21% Similarity=0.247 Sum_probs=43.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCc-c-------------cc--cCCHHHHHHHHHcCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGRE-Q-------------EW--NISRKELLELVESGIL 166 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~-r-------------~~--~Is~~~l~~L~~lGl~ 166 (546)
.+||+||||| .|+++|+.|+++|++|+|+|++..++.. . .| .-.+...+.++++|+.
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~lgl~ 86 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEGANTMTESEGDVTFLIDSLGLR 86 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESSCCCBCCCSHHHHHHHHHTTCG
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecCCcccccCcHHHHHHHHHcCCc
Confidence 5899999976 5999999999999999999998765421 0 01 1235677888999974
No 216
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.03 E-value=0.0034 Score=66.90 Aligned_cols=97 Identities=16% Similarity=0.146 Sum_probs=74.9
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.++++.+..-.
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~------------------------------------------- 217 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP------------------------------------------- 217 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-------------------------------------------
Confidence 369999975 699999999999999999998642100
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCC---cEEEcCEEEEecCCChH
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG---KILSSHLIIDAMGNFSP 262 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g---~~i~ArlVV~ADG~~S~ 262 (546)
. .+ ..+.+.+.+.+++.|++++.+++++++..+++.+.|.+.++ +++.++.||-|.|....
T Consensus 218 -~----------~~-~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 218 -A----------VD-EQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp -T----------SC-HHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEEC
T ss_pred -c----------cC-HHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCccc
Confidence 0 00 12345556677788999999999999988888888887654 58999999999997654
No 217
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.02 E-value=0.00047 Score=75.17 Aligned_cols=35 Identities=34% Similarity=0.479 Sum_probs=31.2
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
.+||+|||||| +|+++|..|++.|++|+|||+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 36999999965 699999999999999999999864
No 218
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.01 E-value=0.0033 Score=67.43 Aligned_cols=96 Identities=18% Similarity=0.213 Sum_probs=71.1
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.|+|+.+..-.. .
T Consensus 195 ~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-----------------~------------------------ 233 (490)
T 2bc0_A 195 KRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG-----------------Y------------------------ 233 (490)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT-----------------T------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh-----------------H------------------------
Confidence 369999976 6999999999999999999987521000 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeE-EEEEcCCcEEEcCEEEEecCCChH
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~~g~~i~ArlVV~ADG~~S~ 262 (546)
++ ..+.+.+.+.+++.|++++.+++++++.. ++.+ .|.+ +|+++.++.||-|.|....
T Consensus 234 ------------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 234 ------------YD-RDLTDLMAKNMEEHGIQLAFGETVKEVAG-NGKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp ------------SC-HHHHHHHHHHHHTTTCEEEETCCEEEEEC-SSSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred ------------HH-HHHHHHHHHHHHhCCeEEEeCCEEEEEEc-CCcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 00 12345566777888999999999999875 3433 3555 6778999999999997654
No 219
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.00 E-value=0.00044 Score=74.51 Aligned_cols=36 Identities=19% Similarity=0.195 Sum_probs=31.6
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~ 145 (546)
+|||+||||| +|+++|..|+++|++|+||||.+..+
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~~GG 44 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGAYGT 44 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSCSSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 5999999965 68889999999999999999987555
No 220
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.98 E-value=0.0024 Score=65.97 Aligned_cols=97 Identities=22% Similarity=0.352 Sum_probs=71.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++|+.+.+- . +
T Consensus 145 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l------------------~-~------------------------ 181 (367)
T 1xhc_A 145 EAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL------------------G-L------------------------ 181 (367)
T ss_dssp EEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT------------------T-C------------------------
T ss_pred cEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec------------------c-C------------------------
Confidence 68999975 69999999999999999999875210 0 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCChH--HHHHhc
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFSP--VVKQIR 268 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S~--vr~ql~ 268 (546)
+ ..+.+.+.+.+++.|++++.+++++++. .+. |++++|+ +.++.||.|.|.... +.+.++
T Consensus 182 ------------~-~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~~--v~~~~g~-i~~D~vi~a~G~~p~~~ll~~~g 243 (367)
T 1xhc_A 182 ------------D-EELSNMIKDMLEETGVKFFLNSELLEAN--EEG--VLTNSGF-IEGKVKICAIGIVPNVDLARRSG 243 (367)
T ss_dssp ------------C-HHHHHHHHHHHHHTTEEEECSCCEEEEC--SSE--EEETTEE-EECSCEEEECCEEECCHHHHHTT
T ss_pred ------------C-HHHHHHHHHHHHHCCCEEEcCCEEEEEE--eeE--EEECCCE-EEcCEEEECcCCCcCHHHHHhCC
Confidence 0 1233455666778899999999999886 333 5666777 999999999996644 455555
Q ss_pred C
Q 009027 269 S 269 (546)
Q Consensus 269 ~ 269 (546)
+
T Consensus 244 l 244 (367)
T 1xhc_A 244 I 244 (367)
T ss_dssp C
T ss_pred C
Confidence 4
No 221
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=96.97 E-value=0.00045 Score=74.62 Aligned_cols=41 Identities=12% Similarity=0.130 Sum_probs=35.8
Q ss_pred CEEEeCceEEEEEEe-CCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 220 GVIFEGYSVSSICTY-ENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 220 ~~v~~~t~v~~i~~~-~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
++|+.+++|++|..+ ++++.|++.+|++++|+.||.|.+..
T Consensus 215 ~~i~~~~~V~~I~~~~~~~v~v~~~~g~~~~ad~VI~t~p~~ 256 (516)
T 1rsg_A 215 NWLKLSCEVKSITREPSKNVTVNCEDGTVYNADYVIITVPQS 256 (516)
T ss_dssp GGEETTCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCCHH
T ss_pred CEEEECCEEEEEEEcCCCeEEEEECCCcEEECCEEEECCCHH
Confidence 479999999999886 66799999888899999999998743
No 222
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=96.95 E-value=0.0039 Score=66.34 Aligned_cols=96 Identities=13% Similarity=0.213 Sum_probs=74.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.++++.+..- . .
T Consensus 171 ~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l---------------------~---------------------~ 208 (463)
T 4dna_A 171 ESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL---------------------S---------------------R 208 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS---------------------T---------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc---------------------c---------------------c
Confidence 369999975 69999999999999999999875210 0 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe-EEEE-EcCCcEEEcCEEEEecCCChH
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA-AVLL-LAEGKILSSHLIIDAMGNFSP 262 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg-v~V~-~~~g~~i~ArlVV~ADG~~S~ 262 (546)
++ ..+.+.+.+.+++.|++++.+++++++..++++ +.|. +++|+ +.++.||-|.|..+.
T Consensus 209 ------------~~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 209 ------------FD-QDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp ------------SC-HHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred ------------cC-HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 00 123456677778889999999999999887666 6788 77887 999999999998654
No 223
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=96.95 E-value=0.00067 Score=70.67 Aligned_cols=35 Identities=23% Similarity=0.361 Sum_probs=30.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCC-CCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERN-TLK 144 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~-~~~ 144 (546)
.+||+||||| +|+++|..|+++|++|+|+|++ ...
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRV 80 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEecccccc
Confidence 5899999976 5999999999999999999998 543
No 224
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.90 E-value=0.0057 Score=65.40 Aligned_cols=94 Identities=14% Similarity=0.131 Sum_probs=70.1
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++...... +
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~------------------------~------------------- 225 (483)
T 3dgh_A 189 KTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLRG------------------------F------------------- 225 (483)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSSTT------------------------S-------------------
T ss_pred cEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCcc------------------------c-------------------
Confidence 58999975 699999999999999999987421000 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCC-eEEEEEcCCc-----EEEcCEEEEecCCCh
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYEN-AAVLLLAEGK-----ILSSHLIIDAMGNFS 261 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~d-gv~V~~~~g~-----~i~ArlVV~ADG~~S 261 (546)
+ ..+.+.+.+.+.+.|++++.++++.++...++ .+.|++.++. ++.++.||-|.|...
T Consensus 226 ------------d-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p 289 (483)
T 3dgh_A 226 ------------D-QQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKG 289 (483)
T ss_dssp ------------C-HHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEE
T ss_pred ------------C-HHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECccccc
Confidence 0 12334556677788999999999999987655 4667765543 799999999999754
No 225
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=96.89 E-value=0.0045 Score=62.93 Aligned_cols=102 Identities=19% Similarity=0.139 Sum_probs=70.4
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|.-+|..|++.|.+|.++++.+..... .+.+
T Consensus 168 ~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~------------------------------~~d~--------- 208 (369)
T 3d1c_A 168 QYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP------------------------------DADP--------- 208 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECC----------------------------------------C---------
T ss_pred EEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC------------------------------CCCC---------
Confidence 69999976 6999999999999999999987521100 0000
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcC-CEEEeCceEEEEEEeCCeEEEEEcCCcEEE-cCEEEEecCCCh
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLG-GVIFEGYSVSSICTYENAAVLLLAEGKILS-SHLIIDAMGNFS 261 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G-~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~-ArlVV~ADG~~S 261 (546)
... ++ ..+.+.+.+.+.+.| ++++.++++.++..+++.+.|++.+|+++. ++.||-|.|...
T Consensus 209 ~~~--------~~-~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~ 272 (369)
T 3d1c_A 209 SVR--------LS-PYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDA 272 (369)
T ss_dssp TTS--------CC-HHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCG
T ss_pred Ccc--------CC-HHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCC
Confidence 000 01 233455666667786 999999999999877888888888887665 588888988654
No 226
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.86 E-value=0.00062 Score=74.97 Aligned_cols=35 Identities=31% Similarity=0.424 Sum_probs=31.1
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCC-CeEEEEcCCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKG-LRVAIVERNTL 143 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G-~rVlLlEr~~~ 143 (546)
.+||+|||||| +|+++|..|++.| ++|+|||+...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 36999999965 7999999999987 79999999876
No 227
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=96.83 E-value=0.0039 Score=62.35 Aligned_cols=89 Identities=18% Similarity=0.034 Sum_probs=64.7
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.++++.+....
T Consensus 174 ~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------- 210 (338)
T 3itj_A 174 KPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------- 210 (338)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-------------------------------------------
Confidence 359999965 699999999999999999997652110
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhc-CCEEEeCceEEEEEEeCCeEE-EEEcC-----CcEEEcCEEEEecCCC
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISL-GGVIFEGYSVSSICTYENAAV-LLLAE-----GKILSSHLIIDAMGNF 260 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~-G~~v~~~t~v~~i~~~~dgv~-V~~~~-----g~~i~ArlVV~ADG~~ 260 (546)
.+.+.+++.+. |++++.+++++++..+++++. |.+.+ +.++.+++||-|.|..
T Consensus 211 ------------------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 211 ------------------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp ------------------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred ------------------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 01123344444 899999999999987766443 55544 3579999999999854
No 228
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=96.82 E-value=0.00086 Score=74.50 Aligned_cols=36 Identities=25% Similarity=0.486 Sum_probs=32.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~ 145 (546)
+||||||||| +|+++|..|+++|++|+|||+....+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDS 82 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCC
Confidence 6999999965 69999999999999999999987655
No 229
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=96.81 E-value=0.011 Score=62.58 Aligned_cols=132 Identities=11% Similarity=0.046 Sum_probs=77.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhC--CCeEEEEcCCCCCCC--cccc---cCCHHHHHHHHHcCCCCcccchhhhhhccCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFK--GLRVAIVERNTLKGR--EQEW---NISRKELLELVESGILVEDDIDEATATKFNP 181 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~--G~rVlLlEr~~~~~~--~r~~---~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~ 181 (546)
.-.|+||||| .|+=+|..|++. |.+|.+++|...... ...+ ..++...+.+..+.- +....+.....
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~~~~l~~----~~~~~~~~~~~- 301 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDLIYSREH----AERERLLREYH- 301 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHHHHHSCH----HHHHHHHHHTG-
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHHHhcCCH----HHHHHHHHHhh-
Confidence 3479999976 599999999988 999999998864321 1000 122222222222210 00000000000
Q ss_pred CcccccCCccccccccccceeCHH----HHHHHHHHHHHh-cCCEEEeCceEEEEEEeCCeEEEEEc---CCc--EEEcC
Q 009027 182 NRCGFEGKGEIWVEDILNLGVSPA----KLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAVLLLA---EGK--ILSSH 251 (546)
Q Consensus 182 ~~v~f~~~~~l~~~~~l~~~V~~~----~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv~V~~~---~g~--~i~Ar 251 (546)
...+ -.++.. ....+..+++.. .|++++.+++|+++..+++++.|++. +|+ ++.+|
T Consensus 302 --------~~~~------~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D 367 (463)
T 3s5w_A 302 --------NTNY------SVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYD 367 (463)
T ss_dssp --------GGTS------SCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEES
T ss_pred --------ccCC------CcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECC
Confidence 0000 012222 222333333333 58899999999999998889888886 565 59999
Q ss_pred EEEEecCCC
Q 009027 252 LIIDAMGNF 260 (546)
Q Consensus 252 lVV~ADG~~ 260 (546)
+||-|.|..
T Consensus 368 ~Vv~AtG~~ 376 (463)
T 3s5w_A 368 AVILATGYE 376 (463)
T ss_dssp EEEECCCEE
T ss_pred EEEEeeCCC
Confidence 999999954
No 230
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=96.79 E-value=0.0017 Score=68.49 Aligned_cols=102 Identities=19% Similarity=0.108 Sum_probs=62.1
Q ss_pred cEEEEcch-HHHHHHHHHHhCC--CeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 112 DVIVCGGT-LGIFIATALSFKG--LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G--~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
.||||||| +|+++|..|++.+ ++|+|||+++.-... +...+. -.|..+. ..+
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~------p~l~~v--~~g~~~~-------------~~i---- 58 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT------PAFPHL--AMGWRKF-------------EDI---- 58 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG------GGHHHH--HHTCSCG-------------GGS----
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccC------ccHHHH--hcCCCCH-------------HHh----
Confidence 49999965 6888999999765 899999987632111 100000 1122111 000
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
..+ + .+.+.+.|++++.+ +|++++.+. -+|++++|+++..|.||-|.|..
T Consensus 59 ----~~~--~-------------~~~~~~~gv~~i~~-~v~~Id~~~--~~V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 59 ----SVP--L-------------APLLPKFNIEFINE-KAESIDPDA--NTVTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp ----EEE--S-------------TTTGGGGTEEEECS-CEEEEETTT--TEEEETTCCEEECSEEEECCCCE
T ss_pred ----hhc--H-------------HHHHHHCCcEEEEe-EEEEEECCC--CEEEECCCCEEECCEEEEeCCCC
Confidence 000 0 00122457888765 688776544 35677889999999999999975
No 231
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.75 E-value=0.0006 Score=74.36 Aligned_cols=34 Identities=32% Similarity=0.580 Sum_probs=30.7
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
+||+|||||| +|+.+|..|++ |.+|+|||+.+..
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 6999999965 69999999999 9999999998754
No 232
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=96.74 E-value=0.00096 Score=71.43 Aligned_cols=40 Identities=8% Similarity=0.033 Sum_probs=34.7
Q ss_pred EEEeCceEEEEEEeCCeEEEEEcCCc----EEEcCEEEEecCCC
Q 009027 221 VIFEGYSVSSICTYENAAVLLLAEGK----ILSSHLIIDAMGNF 260 (546)
Q Consensus 221 ~v~~~t~v~~i~~~~dgv~V~~~~g~----~i~ArlVV~ADG~~ 260 (546)
+|+.+++|++|..+++++.|++.+|+ +++||.||.|.+..
T Consensus 254 ~i~~~~~V~~I~~~~~~v~v~~~~~~~~~~~~~ad~vI~t~p~~ 297 (498)
T 2iid_A 254 KVHFNAQVIKIQQNDQKVTVVYETLSKETPSVTADYVIVCTTSR 297 (498)
T ss_dssp GEESSCEEEEEEECSSCEEEEEECSSSCCCEEEESEEEECSCHH
T ss_pred ccccCCEEEEEEECCCeEEEEEecCCcccceEEeCEEEECCChH
Confidence 79999999999998889999887654 58999999999854
No 233
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=96.73 E-value=0.014 Score=57.83 Aligned_cols=89 Identities=18% Similarity=0.063 Sum_probs=63.7
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.++++.+.... +
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------~------------------------------------ 181 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC------A------------------------------------ 181 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS------C------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC------C------------------------------------
Confidence 469999975 699999999999999999987642110 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHH-hcCCEEEeCceEEEEEEeCCeE-EEEEc---CCc--EEEcCEEEEecCCC
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFI-SLGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMGNF 260 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~-~~G~~v~~~t~v~~i~~~~dgv-~V~~~---~g~--~i~ArlVV~ADG~~ 260 (546)
+ .+.+++. +.|++++.+++++++..+++++ .|.+. +|+ ++.++.||-|.|..
T Consensus 182 --------------~-----~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 182 --------------P-----ITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp --------------H-----HHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred --------------H-----HHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 0 0122333 3688999999999998775654 35544 565 79999999998844
No 234
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.71 E-value=0.0015 Score=68.29 Aligned_cols=34 Identities=26% Similarity=0.168 Sum_probs=30.2
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
+||+||||| +|+.+|..||++|++|+|+|+.+.+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 799999976 6999999999999999999987743
No 235
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=96.71 E-value=0.012 Score=62.72 Aligned_cols=96 Identities=14% Similarity=0.142 Sum_probs=71.9
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++.+..-. .
T Consensus 189 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~------------ 225 (478)
T 3dk9_A 189 RSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR-------------------------------S------------ 225 (478)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------------------T------------
T ss_pred cEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc-------------------------------c------------
Confidence 69999976 699999999999999999997642100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCe--EEEEEcC---C----cEEEcCEEEEecCCCh
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENA--AVLLLAE---G----KILSSHLIIDAMGNFS 261 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dg--v~V~~~~---g----~~i~ArlVV~ADG~~S 261 (546)
.+ ..+.+.+.+.+.+.|++++.+++++++..++++ +.|.+.+ + +++.++.||-|.|...
T Consensus 226 -----------~d-~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p 293 (478)
T 3dk9_A 226 -----------FD-SMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVP 293 (478)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEE
T ss_pred -----------cC-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeecccc
Confidence 00 123345566677789999999999999877666 5676654 2 5799999999999764
Q ss_pred H
Q 009027 262 P 262 (546)
Q Consensus 262 ~ 262 (546)
.
T Consensus 294 ~ 294 (478)
T 3dk9_A 294 N 294 (478)
T ss_dssp S
T ss_pred C
Confidence 4
No 236
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.70 E-value=0.0071 Score=63.96 Aligned_cols=108 Identities=14% Similarity=0.090 Sum_probs=66.3
Q ss_pred EEEEcch-HHHHHHHHHHhCC--CeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 113 VIVCGGT-LGIFIATALSFKG--LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 113 VIIVGGg-~G~~~Aa~LA~~G--~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
||||||| +|+++|..|++.| .+|+|||+.+.....++ .+ ..+. -+... .
T Consensus 3 VvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-~l-----~~~~-~~~~~---------------------~ 54 (437)
T 4eqs_A 3 IVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANC-AL-----PYVI-GEVVE---------------------D 54 (437)
T ss_dssp EEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGG-GH-----HHHH-TTSSC---------------------C
T ss_pred EEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcc-hh-----HHHH-cCCcc---------------------c
Confidence 8999965 6999999999888 57999998764332221 01 0000 00000 0
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcC---CcEEEcCEEEEecCCCh
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE---GKILSSHLIIDAMGNFS 261 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~---g~~i~ArlVV~ADG~~S 261 (546)
.. ..+...+..+ ..+.+++++.+++|+.++.....+.+.... +.++++|.||-|.|...
T Consensus 55 ~~------~~~~~~~~~~-------~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 55 RR------YALAYTPEKF-------YDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASA 116 (437)
T ss_dssp GG------GTBCCCHHHH-------HHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEE
T ss_pred hh------hhhhcCHHHH-------HHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcc
Confidence 00 0011122221 234589999999999988777776665432 33799999999999753
No 237
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=96.67 E-value=0.0075 Score=66.11 Aligned_cols=102 Identities=17% Similarity=0.246 Sum_probs=75.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++.+....
T Consensus 189 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------------------- 224 (588)
T 3ics_A 189 HATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP-------------------------------------------- 224 (588)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT--------------------------------------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc--------------------------------------------
Confidence 59999976 699999999999999999997642110
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh--HHHHHhc
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS--PVVKQIR 268 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S--~vr~ql~ 268 (546)
. .+ ..+.+.+.+.+++.|++++.+++++++..++++ |.+++|+++.++.||-|.|... .+.+.++
T Consensus 225 ~----------~~-~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--v~~~~g~~i~~D~Vi~a~G~~p~~~~l~~~g 291 (588)
T 3ics_A 225 P----------ID-YEMAAYVHEHMKNHDVELVFEDGVDALEENGAV--VRLKSGSVIQTDMLILAIGVQPESSLAKGAG 291 (588)
T ss_dssp T----------SC-HHHHHHHHHHHHHTTCEEECSCCEEEEEGGGTE--EEETTSCEEECSEEEECSCEEECCHHHHHTT
T ss_pred c----------CC-HHHHHHHHHHHHHcCCEEEECCeEEEEecCCCE--EEECCCCEEEcCEEEEccCCCCChHHHHhcC
Confidence 0 00 123455666777889999999999998765454 5667888999999999999754 3555555
Q ss_pred CC
Q 009027 269 SG 270 (546)
Q Consensus 269 ~~ 270 (546)
+.
T Consensus 292 ~~ 293 (588)
T 3ics_A 292 LA 293 (588)
T ss_dssp CC
T ss_pred ce
Confidence 43
No 238
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=96.65 E-value=0.0054 Score=62.44 Aligned_cols=93 Identities=18% Similarity=0.159 Sum_probs=66.4
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++.+..... .
T Consensus 165 ~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~------------------------------------------~ 202 (360)
T 3ab1_A 165 RVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH------------------------------------------G 202 (360)
T ss_dssp EEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC------------------------------------------S
T ss_pred cEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC------------------------------------------H
Confidence 69999975 6999999999999999999987521100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeE-EEEE--cCC--cEEEcCEEEEecCCCh
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLL--AEG--KILSSHLIIDAMGNFS 261 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~--~~g--~~i~ArlVV~ADG~~S 261 (546)
.+.+.|.+..++.|++++.+++++++..+++.+ .|.+ .+| .++.++.||-|.|...
T Consensus 203 ---------------~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p 263 (360)
T 3ab1_A 203 ---------------KTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKS 263 (360)
T ss_dssp ---------------HHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCC
T ss_pred ---------------HHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCC
Confidence 011123334456789999999999998876643 3444 366 5799999999999553
No 239
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=96.65 E-value=0.0014 Score=68.33 Aligned_cols=36 Identities=25% Similarity=0.455 Sum_probs=31.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~ 145 (546)
++||+||||| .|+++|..|+++|++|+|+|++...+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 4799999976 59999999999999999999976543
No 240
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.61 E-value=0.0071 Score=62.68 Aligned_cols=102 Identities=19% Similarity=0.124 Sum_probs=61.2
Q ss_pred cEEEEcch-HHHHHHHHHHhCC--CeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 112 DVIVCGGT-LGIFIATALSFKG--LRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G--~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
-||||||| +|+++|..|+++| .+|+|||+++.-.... .+. ..+ .|..+.
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p---~~~---~v~--~g~~~~-------------------- 55 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY---MSN---EVI--GGDREL-------------------- 55 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST---THH---HHH--HTSSCG--------------------
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc---CHH---HHh--cCCCCH--------------------
Confidence 49999965 6888888898765 6999999876421110 000 000 011100
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
..+. .+.. .+...|++++.+ +|++++.+. -.|.+.+|+++..+.||.|.|...
T Consensus 56 -~~~~--------~~~~--------~~~~~gv~~i~~-~v~~id~~~--~~v~~~~g~~i~yd~LviAtG~~~ 108 (401)
T 3vrd_B 56 -ASLR--------VGYD--------GLRAHGIQVVHD-SALGIDPDK--KLVKTAGGAEFAYDRCVVAPGIDL 108 (401)
T ss_dssp -GGGE--------ECSH--------HHHHTTCEEECS-CEEEEETTT--TEEEETTSCEEECSEEEECCCEEE
T ss_pred -HHHh--------hCHH--------HHHHCCCEEEEe-EEEEEEccC--cEEEecccceeecceeeeccCCcc
Confidence 0000 1111 123468888765 677765443 356677888999999999999753
No 241
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.60 E-value=0.0012 Score=72.71 Aligned_cols=34 Identities=29% Similarity=0.494 Sum_probs=30.2
Q ss_pred CcccEEEEcch-HHHHHHHHHHh-CCCeEEEEcCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSF-KGLRVAIVERNT 142 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~-~G~rVlLlEr~~ 142 (546)
..||+|||||| +|+++|..|++ .|++|+|||+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 37999999965 79999999996 489999999987
No 242
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=96.60 E-value=0.016 Score=58.09 Aligned_cols=93 Identities=13% Similarity=0.113 Sum_probs=66.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|.-+|..|++.|.+|.++++.+.... .
T Consensus 154 ~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~------------------------------------------~- 190 (335)
T 2zbw_A 154 RVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA------------------------------------------H- 190 (335)
T ss_dssp EEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS------------------------------------------C-
T ss_pred EEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc------------------------------------------c-
Confidence 69999976 699999999999999999998752110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEc---CC--cEEEcCEEEEecCCCh
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLA---EG--KILSSHLIIDAMGNFS 261 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~---~g--~~i~ArlVV~ADG~~S 261 (546)
..+.+.|.+.+++.|++++.++++.++..++....|.++ +| +++.++.||-|.|...
T Consensus 191 --------------~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 191 --------------EASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYIT 252 (335)
T ss_dssp --------------HHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred --------------HHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCC
Confidence 001123455566779999999999999874332245554 56 5799999999998553
No 243
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.59 E-value=0.0012 Score=70.18 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=30.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
+|||+||||| +|+++|..|++.|++|+|+|+...
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~ 38 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAKEL 38 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESSCT
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCCCC
Confidence 6999999965 688899999999999999999854
No 244
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.59 E-value=0.012 Score=62.10 Aligned_cols=103 Identities=19% Similarity=0.240 Sum_probs=73.4
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++|+.+..-. .
T Consensus 150 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~------------ 186 (449)
T 3kd9_A 150 NVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR-------------------------------R------------ 186 (449)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT-------------------------------T------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch-------------------------------h------------
Confidence 79999976 699999999999999999998652100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCC--hHHHHHhc
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF--SPVVKQIR 268 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~--S~vr~ql~ 268 (546)
. ++ ..+.+.+.+.+.+. ++++.++.+.++..++ .+.+...+++++.++.||-|.|.. +.+.+.++
T Consensus 187 ~----------~~-~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~~p~~~l~~~~g 253 (449)
T 3kd9_A 187 S----------FD-KEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGIKPNIELAKQLG 253 (449)
T ss_dssp T----------SC-HHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCEEECCHHHHHTT
T ss_pred h----------cC-HHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCCccCHHHHHhCC
Confidence 0 00 12345566666667 9999999999886544 443334477889999999999975 34566665
Q ss_pred CC
Q 009027 269 SG 270 (546)
Q Consensus 269 ~~ 270 (546)
+.
T Consensus 254 l~ 255 (449)
T 3kd9_A 254 VR 255 (449)
T ss_dssp CC
T ss_pred cc
Confidence 44
No 245
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=96.55 E-value=0.0018 Score=69.56 Aligned_cols=36 Identities=25% Similarity=0.278 Sum_probs=31.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCC-CeEEEEcCCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKG-LRVAIVERNTLKG 145 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G-~rVlLlEr~~~~~ 145 (546)
.+||+||||| .|+++|..|+++| .+|+|+|+...++
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPG 46 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 6899999976 5999999999998 7999999986543
No 246
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.54 E-value=0.017 Score=61.79 Aligned_cols=95 Identities=19% Similarity=0.240 Sum_probs=69.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++....+.
T Consensus 187 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~~-------------------------------------------- 222 (488)
T 3dgz_A 187 KTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLRG-------------------------------------------- 222 (488)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT--------------------------------------------
T ss_pred eEEEECCCHHHHHHHHHHHHcCCceEEEEcCccccc--------------------------------------------
Confidence 59999975 699999999999999999987531100
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeC-CeEEEEEcC---Cc--EEEcCEEEEecCCChH
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NAAVLLLAE---GK--ILSSHLIIDAMGNFSP 262 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~-dgv~V~~~~---g~--~i~ArlVV~ADG~~S~ 262 (546)
++ ..+.+.+.+.+.+.|++++.++++.++...+ +.+.|.+.+ |+ ++.++.||-|.|....
T Consensus 223 -----------~d-~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 223 -----------FD-QQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEES
T ss_pred -----------CC-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcc
Confidence 00 1233455667778899999999999998754 446666643 44 5899999999997643
No 247
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=96.43 E-value=0.0021 Score=68.40 Aligned_cols=55 Identities=5% Similarity=0.038 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHhc--------CCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 206 KLIEIVKKRFISL--------GGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 206 ~L~~~L~~~a~~~--------G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
.+.+.|.+++.+. |++|+.+++|++|..++++++|++.+|++++|+.||.|.+..
T Consensus 207 ~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~ 269 (472)
T 1b37_A 207 AVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLG 269 (472)
T ss_dssp HHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHH
T ss_pred HHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHH
Confidence 3444555555443 678999999999999999999999888899999999999853
No 248
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.43 E-value=0.0024 Score=68.17 Aligned_cols=36 Identities=31% Similarity=0.395 Sum_probs=31.4
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCCC
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLKG 145 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~~ 145 (546)
.+||+|||| ++|+++|..|+++|++|+|+|+....+
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~G 158 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMG 158 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCC
Confidence 589999996 579999999999999999999986543
No 249
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.43 E-value=0.0027 Score=70.47 Aligned_cols=53 Identities=15% Similarity=0.117 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEeC--CeEE-EEEcCCcEEEcCEEEEecC
Q 009027 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYE--NAAV-LLLAEGKILSSHLIIDAMG 258 (546)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~--dgv~-V~~~~g~~i~ArlVV~ADG 258 (546)
.|-+.|.+.++..|++++.+++|.+|..++ +.++ |...+|++++|+.||....
T Consensus 379 ~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 379 ELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS 434 (650)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG
T ss_pred HHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh
Confidence 344566677888999999999999998877 4444 3446789999999997444
No 250
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=96.38 E-value=0.024 Score=55.84 Aligned_cols=89 Identities=18% Similarity=0.121 Sum_probs=63.5
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+|+||| .|+-+|..|++.|.+|.++++.+.... .
T Consensus 149 ~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------~- 185 (315)
T 3r9u_A 149 EVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA------------------------------------------A- 185 (315)
T ss_dssp EEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS------------------------------------------C-
T ss_pred EEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC------------------------------------------C-
Confidence 69999965 699999999999999999987642100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEE-EEEc--CCc--EEEcCEEEEecCCC
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAV-LLLA--EGK--ILSSHLIIDAMGNF 260 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~-V~~~--~g~--~i~ArlVV~ADG~~ 260 (546)
+. .+.+.+++.|++++.++++.++..+++.+. |.+. +|+ ++.++.||-|.|..
T Consensus 186 -------------~~----~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 186 -------------PS----TVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp -------------HH----HHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred -------------HH----HHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 00 111122467899999999999988775432 4443 665 79999999998843
No 251
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.37 E-value=0.0015 Score=71.68 Aligned_cols=35 Identities=26% Similarity=0.410 Sum_probs=30.9
Q ss_pred cccEEEEcch-HHHHHHHHHHh-CCCeEEEEcCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSF-KGLRVAIVERNTLK 144 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~-~G~rVlLlEr~~~~ 144 (546)
+||+|||||| +|+.+|..|++ .|++|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5999999965 69999999998 79999999998654
No 252
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=96.31 E-value=0.023 Score=56.59 Aligned_cols=88 Identities=15% Similarity=0.089 Sum_probs=62.4
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++.+.... .
T Consensus 157 ~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~------------------------------------------~- 193 (319)
T 3cty_A 157 RVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC------------------------------------------E- 193 (319)
T ss_dssp EEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS------------------------------------------C-
T ss_pred eEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC------------------------------------------C-
Confidence 59999965 699999999999999999997642100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeE-EEEEc---CCc--EEEcCEEEEecCCC
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMGNF 260 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv-~V~~~---~g~--~i~ArlVV~ADG~~ 260 (546)
..+.+++.+.|++++.+++++++..+++.+ .|.+. +|+ ++.++.||-|.|..
T Consensus 194 ------------------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 194 ------------------NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp ------------------HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred ------------------HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 012333446799999999999997765422 34443 554 68999999988844
No 253
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=96.29 E-value=0.022 Score=56.39 Aligned_cols=88 Identities=17% Similarity=0.108 Sum_probs=62.1
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++.+.... .
T Consensus 146 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------~- 182 (310)
T 1fl2_A 146 RVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA------------------------------------------D- 182 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCCS------------------------------------------C-
T ss_pred EEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccCc------------------------------------------c-
Confidence 69999965 699999999999999999997652100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEeCCeE-EEEEc---CCc--EEEcCEEEEecCCC
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMGNF 260 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv-~V~~~---~g~--~i~ArlVV~ADG~~ 260 (546)
+.+.+++.+ .|++++.+++++++..+++.+ .|.+. +|+ ++.++.||-|.|..
T Consensus 183 ------------------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 183 ------------------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLL 241 (310)
T ss_dssp ------------------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ------------------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCc
Confidence 012233444 588999999999997665543 34443 243 78999999888743
No 254
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.13 E-value=0.0048 Score=69.75 Aligned_cols=37 Identities=19% Similarity=0.183 Sum_probs=32.0
Q ss_pred CCcccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 108 VGTFDVIVCGG-TLGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 108 ~~~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
+..+||+|||| ++|+++|..|+++|++|+|+|+....
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 44689999996 56999999999999999999998654
No 255
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=96.12 E-value=0.014 Score=61.61 Aligned_cols=91 Identities=15% Similarity=0.265 Sum_probs=67.1
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..+++.|.+|.|+|+...... .. ..
T Consensus 149 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~------------------~~----------------------d~ 188 (437)
T 4eqs_A 149 KVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK------------------LM----------------------DA 188 (437)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST------------------TS----------------------CG
T ss_pred EEEEECCccchhhhHHHHHhcCCcceeeeeeccccc------------------cc----------------------cc
Confidence 69999975 699999999999999999997752110 00 00
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
.+.+.+.+.+.+.|++++.+++++++. ++ .|.+++|+++.+++||-|.|...
T Consensus 189 ---------------~~~~~~~~~l~~~gV~i~~~~~v~~~~--~~--~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 189 ---------------DMNQPILDELDKREIPYRLNEEINAIN--GN--EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp ---------------GGGHHHHHHHHHTTCCEEESCCEEEEE--TT--EEEETTSCEEECSEEEECCCEEE
T ss_pred ---------------hhHHHHHHHhhccceEEEeccEEEEec--CC--eeeecCCeEEeeeeEEEEeceec
Confidence 011334556667899999999998763 33 35677899999999999999653
No 256
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=96.10 E-value=0.035 Score=58.97 Aligned_cols=95 Identities=14% Similarity=0.218 Sum_probs=68.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++.+..-.. +
T Consensus 174 ~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------------~---- 211 (466)
T 3l8k_A 174 DMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT--------------------------------------L---- 211 (466)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT--------------------------------------S----
T ss_pred eEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC--------------------------------------C----
Confidence 59999976 6999999999999999999986521100 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeC-CeEEEEEc--CCc--EEEcCEEEEecCCChHH
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE-NAAVLLLA--EGK--ILSSHLIIDAMGNFSPV 263 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~-dgv~V~~~--~g~--~i~ArlVV~ADG~~S~v 263 (546)
++ ..+.+.+.+.+. ++++.+++++++..++ +++.|.++ +|+ ++.++.||-|.|.....
T Consensus 212 -----------~d-~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 212 -----------ED-QDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPVI 274 (466)
T ss_dssp -----------CC-HHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEECC
T ss_pred -----------CC-HHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCccc
Confidence 00 012222333332 8999999999998877 78888887 565 89999999999976543
No 257
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=96.10 E-value=0.041 Score=54.88 Aligned_cols=88 Identities=16% Similarity=0.166 Sum_probs=61.4
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++.+.... +
T Consensus 154 ~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------~------------------------------------- 190 (325)
T 2q7v_A 154 KVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA------N------------------------------------- 190 (325)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS------C-------------------------------------
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc------c-------------------------------------
Confidence 59999965 699999999999999999997642110 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEeCCeEEEEEc---CCc--EEEcCEEEEecCCC
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAVLLLA---EGK--ILSSHLIIDAMGNF 260 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv~V~~~---~g~--~i~ArlVV~ADG~~ 260 (546)
..+.+++.+ .|++++.+++++++..++....|.+. +|+ ++.++.||-|.|..
T Consensus 191 ------------------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 191 ------------------KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp ------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ------------------hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 011223333 58899999999998764332234443 564 78999999988844
No 258
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.07 E-value=0.004 Score=67.21 Aligned_cols=33 Identities=18% Similarity=0.173 Sum_probs=30.2
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
+||+|||||| +|+++|..|++.|++|+|||+..
T Consensus 5 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 5 YVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 6999999965 69999999999999999999876
No 259
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.06 E-value=0.0051 Score=68.73 Aligned_cols=38 Identities=21% Similarity=0.353 Sum_probs=32.1
Q ss_pred CCcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCC
Q 009027 108 VGTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (546)
Q Consensus 108 ~~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~ 145 (546)
+..+||+||||| +|+.+|..|+++|++|+|+|+.+..+
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~g 409 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIG 409 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 446899999965 68899999999999999999986543
No 260
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.06 E-value=0.0047 Score=66.75 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=30.5
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.+||+|||||| +|+++|..|++.|++|+|||+..
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 44 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGR 44 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCC
Confidence 37999999965 69999999999999999999875
No 261
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=95.99 E-value=0.064 Score=57.88 Aligned_cols=95 Identities=14% Similarity=0.151 Sum_probs=67.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++....+.
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~~-------------------------------------------- 247 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAGIGLDVTVMVRSILLRG-------------------------------------------- 247 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT--------------------------------------------
T ss_pred eEEEECCcHHHHHHHHHHHHcCCeEEEEeccccccc--------------------------------------------
Confidence 59999975 699999999999999999987421000
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeC----CeEEEEE--cCC-c--EEEcCEEEEecCCCh
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYE----NAAVLLL--AEG-K--ILSSHLIIDAMGNFS 261 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~----dgv~V~~--~~g-~--~i~ArlVV~ADG~~S 261 (546)
+| ..+.+.+.+.+++.|++++.+++++++...+ +.+.|++ .++ + ++.+++||-|.|...
T Consensus 248 -----------~d-~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 248 -----------FD-QDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEE
T ss_pred -----------CC-HHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcc
Confidence 00 1233455666778899999999888886543 3455544 344 2 578999999999764
Q ss_pred H
Q 009027 262 P 262 (546)
Q Consensus 262 ~ 262 (546)
.
T Consensus 316 ~ 316 (519)
T 3qfa_A 316 C 316 (519)
T ss_dssp S
T ss_pred c
Confidence 3
No 262
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=95.97 E-value=0.04 Score=54.37 Aligned_cols=90 Identities=18% Similarity=0.090 Sum_probs=64.3
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+|+||| .|+-+|..|++.|.+|.++++.+....
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------- 191 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA------------------------------------------- 191 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-------------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-------------------------------------------
Confidence 369999975 699999999999999999997642110
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEeCCeEEEEEcC---Cc--EEEcCEEEEecCCCh
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAAVLLLAE---GK--ILSSHLIIDAMGNFS 261 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv~V~~~~---g~--~i~ArlVV~ADG~~S 261 (546)
++ .+.+++.+ .|++++.+++++++..++....|.+.+ |+ ++.+++||-|.|...
T Consensus 192 -------------~~-----~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 251 (323)
T 3f8d_A 192 -------------QP-----IYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDP 251 (323)
T ss_dssp -------------CH-----HHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEC
T ss_pred -------------CH-----HHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCC
Confidence 00 11223333 488999999999998765544466654 65 799999999998653
No 263
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=95.97 E-value=0.0045 Score=67.51 Aligned_cols=36 Identities=39% Similarity=0.498 Sum_probs=31.3
Q ss_pred CcccEEEEcch-HHHHHHHHHHhC-CCeEEEEcCCCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFK-GLRVAIVERNTLK 144 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~-G~rVlLlEr~~~~ 144 (546)
.+||+|||||| .|+++|..|++. |.+|+|||+....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 36999999965 699999999998 9999999988643
No 264
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=95.94 E-value=0.065 Score=58.73 Aligned_cols=96 Identities=18% Similarity=0.171 Sum_probs=66.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.|+++....+.
T Consensus 288 ~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~~-------------------------------------------- 323 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLASLGGDVTVMVRSILLRG-------------------------------------------- 323 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSSTT--------------------------------------------
T ss_pred EEEEECCCHHHHHHHHHHHHcCCEEEEEECCcCcCc--------------------------------------------
Confidence 59999976 699999999999999999997621000
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEe------C---CeEEEE--EcCCcEEE--cCEEEEec
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY------E---NAAVLL--LAEGKILS--SHLIIDAM 257 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~------~---dgv~V~--~~~g~~i~--ArlVV~AD 257 (546)
++ ..+.+.+.+.+++.|++++.++.++++... + +.+.+. ..+|+++. ++.||-|.
T Consensus 324 -----------~d-~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~ 391 (598)
T 2x8g_A 324 -----------FD-QQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAV 391 (598)
T ss_dssp -----------SC-HHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECS
T ss_pred -----------CC-HHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEe
Confidence 00 012233445566789999999988887543 2 445554 35676555 99999999
Q ss_pred CCChHH
Q 009027 258 GNFSPV 263 (546)
Q Consensus 258 G~~S~v 263 (546)
|.....
T Consensus 392 G~~p~~ 397 (598)
T 2x8g_A 392 GREPQL 397 (598)
T ss_dssp CEEECG
T ss_pred CCcccc
Confidence 976543
No 265
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=95.92 E-value=0.005 Score=67.79 Aligned_cols=36 Identities=28% Similarity=0.564 Sum_probs=31.4
Q ss_pred CcccEEEEcch-HHHHHHHHHHh-CCCeEEEEcCCCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSF-KGLRVAIVERNTLK 144 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~-~G~rVlLlEr~~~~ 144 (546)
.+||+|||||| +|+++|..|++ .|++|+|||+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 36999999965 69999999999 89999999988643
No 266
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=95.84 E-value=0.0076 Score=67.32 Aligned_cols=40 Identities=10% Similarity=0.046 Sum_probs=35.4
Q ss_pred CCEEEeCceEEEEEEeCCeEEEEEcC------CcEEEcCEEEEecC
Q 009027 219 GGVIFEGYSVSSICTYENAAVLLLAE------GKILSSHLIIDAMG 258 (546)
Q Consensus 219 G~~v~~~t~v~~i~~~~dgv~V~~~~------g~~i~ArlVV~ADG 258 (546)
+.+|+.+++|++|..++++++|++.+ +++++||.||.|..
T Consensus 410 ~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP 455 (662)
T 2z3y_A 410 GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLP 455 (662)
T ss_dssp TCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCC
T ss_pred cCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCC
Confidence 56899999999999999999998765 56899999998876
No 267
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=95.78 E-value=0.014 Score=57.14 Aligned_cols=83 Identities=13% Similarity=0.078 Sum_probs=60.4
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+|+||| .|+-+|..|++.| +|.++++.+. .++
T Consensus 142 ~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~-------~~~------------------------------------ 177 (297)
T 3fbs_A 142 GKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV-------EPD------------------------------------ 177 (297)
T ss_dssp CEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC-------CCC------------------------------------
T ss_pred CEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC-------CCC------------------------------------
Confidence 369999965 6999999999999 9999976532 000
Q ss_pred ccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
+.+.+.+.+.|++++. ++++++.. ++ .|.+++|+++.+++||-|.|..
T Consensus 178 -------------------~~~~~~l~~~gv~i~~-~~v~~i~~--~~-~v~~~~g~~~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 178 -------------------ADQHALLAARGVRVET-TRIREIAG--HA-DVVLADGRSIALAGLFTQPKLR 225 (297)
T ss_dssp -------------------HHHHHHHHHTTCEEEC-SCEEEEET--TE-EEEETTSCEEEESEEEECCEEE
T ss_pred -------------------HHHHHHHHHCCcEEEc-ceeeeeec--CC-eEEeCCCCEEEEEEEEEccCcc
Confidence 0123344567899885 88887753 33 6777788899999999998853
No 268
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=95.74 E-value=0.056 Score=53.93 Aligned_cols=88 Identities=20% Similarity=0.137 Sum_probs=62.3
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++.+.... .
T Consensus 161 ~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~------------------------------------------~- 197 (333)
T 1vdc_A 161 PLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA------------------------------------------S- 197 (333)
T ss_dssp EEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------C-
T ss_pred eEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc------------------------------------------c-
Confidence 69999976 699999999999999999998753110 0
Q ss_pred cccccccccceeCHHHHHHHHHHH-HHhcCCEEEeCceEEEEEEeCC--eE-EEEEc---CC--cEEEcCEEEEecCCC
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKR-FISLGGVIFEGYSVSSICTYEN--AA-VLLLA---EG--KILSSHLIIDAMGNF 260 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~-a~~~G~~v~~~t~v~~i~~~~d--gv-~V~~~---~g--~~i~ArlVV~ADG~~ 260 (546)
+.+.++ +.+.|++++.+++++++..+++ .+ .|.+. +| .++.++.||-|.|..
T Consensus 198 ------------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 258 (333)
T 1vdc_A 198 ------------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHE 258 (333)
T ss_dssp ------------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred ------------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCc
Confidence 001112 2356889999999999987654 33 24443 34 479999999998854
No 269
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=95.70 E-value=0.028 Score=55.80 Aligned_cols=88 Identities=17% Similarity=0.151 Sum_probs=63.1
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++.+.... ..
T Consensus 156 ~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~------------------------------------------~~ 193 (332)
T 3lzw_A 156 RVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA------------------------------------------HE 193 (332)
T ss_dssp EEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS------------------------------------------CH
T ss_pred EEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc------------------------------------------cH
Confidence 59999965 699999999999999999987642100 00
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcC-----CcEEEcCEEEEecCCC
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAE-----GKILSSHLIIDAMGNF 260 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~-----g~~i~ArlVV~ADG~~ 260 (546)
. ..+++.+.|++++.++++.++..+++...|.+.+ +.++.+++||-|.|..
T Consensus 194 ~-------------------~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 194 H-------------------SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp H-------------------HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred H-------------------HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 0 0122456799999999999987665544455543 3479999999988843
No 270
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.69 E-value=0.015 Score=62.80 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=28.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
...||||||| +|+.+|..|++.+++|+|||+++
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 4579999976 68888889999999999999875
No 271
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=95.56 E-value=0.06 Score=58.51 Aligned_cols=50 Identities=16% Similarity=0.139 Sum_probs=35.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCC-cccccCCHHHHHHHH
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGR-EQEWNISRKELLELV 161 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~-~r~~~Is~~~l~~L~ 161 (546)
.|+||||| .|+-+|..|++.|.+|.|++|.+..-. ...-.++....+.|.
T Consensus 180 rV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~ 231 (540)
T 3gwf_A 180 RVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIK 231 (540)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHH
T ss_pred eEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHH
Confidence 69999976 599999999999999999999875211 111235655554454
No 272
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=95.53 E-value=0.012 Score=67.49 Aligned_cols=40 Identities=10% Similarity=0.046 Sum_probs=34.5
Q ss_pred CCEEEeCceEEEEEEeCCeEEEEEcC------CcEEEcCEEEEecC
Q 009027 219 GGVIFEGYSVSSICTYENAAVLLLAE------GKILSSHLIIDAMG 258 (546)
Q Consensus 219 G~~v~~~t~v~~i~~~~dgv~V~~~~------g~~i~ArlVV~ADG 258 (546)
+.+|+.+++|++|..++++|.|++.+ +.+++||.||.|--
T Consensus 581 ~l~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvP 626 (852)
T 2xag_A 581 GLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLP 626 (852)
T ss_dssp TCCEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCC
T ss_pred CCCEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCC
Confidence 45799999999999999999998754 46899999998865
No 273
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.43 E-value=0.099 Score=55.57 Aligned_cols=48 Identities=23% Similarity=0.227 Sum_probs=35.2
Q ss_pred ccEEEEcch-HHHHHHHHHH--------------------hCCC-eEEEEcCCCCCCCcccccCCHHHHHHHHH
Q 009027 111 FDVIVCGGT-LGIFIATALS--------------------FKGL-RVAIVERNTLKGREQEWNISRKELLELVE 162 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA--------------------~~G~-rVlLlEr~~~~~~~r~~~Is~~~l~~L~~ 162 (546)
-.|+||||| .|+=+|..|+ +.|. +|.|++|...... ..+..++..|..
T Consensus 146 ~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~----~ft~~el~~l~~ 215 (460)
T 1cjc_A 146 DTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQV----AFTIKELREMIQ 215 (460)
T ss_dssp SEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGC----CCCHHHHHHHHT
T ss_pred CEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhh----ccCHHHHHHhhc
Confidence 369999976 6999999998 6788 6999998764322 356666665543
No 274
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.35 E-value=0.011 Score=69.32 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=30.6
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCC-eEEEEcCCCCC
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGL-RVAIVERNTLK 144 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~-rVlLlEr~~~~ 144 (546)
.+||+|||| ++|+++|..|+++|+ +|+|+|+....
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~ 223 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYV 223 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCC
Confidence 689999996 579999999999999 79999998644
No 275
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.25 E-value=0.049 Score=58.68 Aligned_cols=53 Identities=19% Similarity=0.159 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEE--cCCc----EEEcCEEEEecCCC
Q 009027 206 KLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEGK----ILSSHLIIDAMGNF 260 (546)
Q Consensus 206 ~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~--~~g~----~i~ArlVV~ADG~~ 260 (546)
.+.+.+.+.+++.|++++.+++|+++ +++++.+.. .+|+ +|.|++||-|.|..
T Consensus 273 ~~~~~~~~~L~~~GV~v~~~~~v~~v--~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 273 KLSSYAQSHLENTSIKVHLRTAVAKV--EEKQLLAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp HHHHHHHHHHHHTTCEEETTEEEEEE--CSSEEEEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHhcceeeecCceEEEE--eCCceEEEEEecCcccceeeeccCEEEEccCCc
Confidence 45566777888899999999999887 456665543 4553 69999999999953
No 276
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=95.19 E-value=0.014 Score=62.17 Aligned_cols=36 Identities=25% Similarity=0.275 Sum_probs=31.1
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCC--CeEEEEcCCCCCC
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKG--LRVAIVERNTLKG 145 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G--~rVlLlEr~~~~~ 145 (546)
.+||+|||| ++|+.+|..|+++| ++|+|+|+.+.+.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~g 44 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPF 44 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSC
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCC
Confidence 589999996 56999999999988 9999999987543
No 277
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=95.15 E-value=0.058 Score=54.13 Aligned_cols=89 Identities=19% Similarity=0.083 Sum_probs=60.4
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGK 189 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~ 189 (546)
-.|+||||| .|+-+|..|++.|.+|.++++.+.... .
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~------------------------------------------~ 193 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA------------------------------------------S 193 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS------------------------------------------C
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc------------------------------------------c
Confidence 369999965 699999999999999999997642100 0
Q ss_pred ccccccccccceeCHHHHHHHHHHH-HHhcCCEEEeCceEEEEEEeCC--eEEEEE-cCC--cEEEcCEEEEecCCC
Q 009027 190 GEIWVEDILNLGVSPAKLIEIVKKR-FISLGGVIFEGYSVSSICTYEN--AAVLLL-AEG--KILSSHLIIDAMGNF 260 (546)
Q Consensus 190 ~~l~~~~~l~~~V~~~~L~~~L~~~-a~~~G~~v~~~t~v~~i~~~~d--gv~V~~-~~g--~~i~ArlVV~ADG~~ 260 (546)
. .+.++ ..+.|++++.+++++++..+++ ++.+.. .+| +++.++.||-|.|..
T Consensus 194 ~-------------------~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 194 K-------------------IMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp T-------------------THHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred H-------------------HHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 0 00111 2357889999999998875543 244432 134 478999999888843
No 278
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.14 E-value=0.012 Score=64.04 Aligned_cols=32 Identities=19% Similarity=0.161 Sum_probs=28.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
.|+||||| .|.-+|..|++.|.+|.|++|.+.
T Consensus 187 rV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 187 RVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp EEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred eEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 59999976 599999999999999999999874
No 279
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=95.12 E-value=0.013 Score=62.45 Aligned_cols=36 Identities=17% Similarity=0.239 Sum_probs=30.7
Q ss_pred cccEEEEcc-hHHHHHHHHHHh-C------CCeEEEEcCCCCCC
Q 009027 110 TFDVIVCGG-TLGIFIATALSF-K------GLRVAIVERNTLKG 145 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~-~------G~rVlLlEr~~~~~ 145 (546)
.+||+|||| ++|+.+|..|++ + |++|+|||+.+.+.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~g 46 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPW 46 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCS
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCC
Confidence 589999996 568899999999 7 99999999986543
No 280
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=94.93 E-value=0.016 Score=60.29 Aligned_cols=83 Identities=22% Similarity=0.264 Sum_probs=60.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.|+|+.+.+-..
T Consensus 148 ~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~------------------------------------------- 184 (385)
T 3klj_A 148 KAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER------------------------------------------- 184 (385)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT-------------------------------------------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh-------------------------------------------
Confidence 59999976 6999999999999999999987531100
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCCh
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNFS 261 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~S 261 (546)
. ++ ..+.+.+.+.+++.|++++.+++++++ |+++.+++||-|.|...
T Consensus 185 ~----------~~-~~~~~~~~~~l~~~gV~~~~~~~v~~i-------------g~~~~~D~vv~a~G~~p 231 (385)
T 3klj_A 185 Q----------LD-RDGGLFLKDKLDRLGIKIYTNSNFEEM-------------GDLIRSSCVITAVGVKP 231 (385)
T ss_dssp T----------SC-HHHHHHHHHHHHTTTCEEECSCCGGGC-------------HHHHHHSEEEECCCEEE
T ss_pred h----------cC-HHHHHHHHHHHHhCCCEEEeCCEEEEc-------------CeEEecCeEEECcCccc
Confidence 0 00 123344556666788888888877665 55688999999999764
No 281
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=94.24 E-value=0.18 Score=54.27 Aligned_cols=87 Identities=17% Similarity=0.098 Sum_probs=61.4
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.++++.+....
T Consensus 357 ~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~~-------------------------------------------- 392 (521)
T 1hyu_A 357 RVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKA-------------------------------------------- 392 (521)
T ss_dssp EEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCCS--------------------------------------------
T ss_pred eEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccCc--------------------------------------------
Confidence 69999976 699999999999999999987642110
Q ss_pred cccccccccceeCHHHHHHHHHHHHHh-cCCEEEeCceEEEEEEeCCeE-EEEEc---CCc--EEEcCEEEEecCC
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFIS-LGGVIFEGYSVSSICTYENAA-VLLLA---EGK--ILSSHLIIDAMGN 259 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~-~G~~v~~~t~v~~i~~~~dgv-~V~~~---~g~--~i~ArlVV~ADG~ 259 (546)
+ ..+.+++.+ .|++++.+++++++..+++.+ .|.+. +|+ ++.++.||-|.|.
T Consensus 393 ------------~-----~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 451 (521)
T 1hyu_A 393 ------------D-----QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGL 451 (521)
T ss_dssp ------------C-----HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred ------------C-----HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCC
Confidence 0 112334444 488999999999987665544 34443 243 6889999988773
No 282
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=94.10 E-value=0.094 Score=57.10 Aligned_cols=32 Identities=19% Similarity=0.171 Sum_probs=28.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
.|+||||| .|.-+|..|++.|.+|.|++|.+.
T Consensus 193 rV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 193 RVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp EEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred EEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 59999976 599999999999999999999874
No 283
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=93.93 E-value=0.11 Score=55.19 Aligned_cols=130 Identities=21% Similarity=0.151 Sum_probs=69.5
Q ss_pred ccEEEEcch-HHHHHHHHHHhC--------------------CC-eEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCc
Q 009027 111 FDVIVCGGT-LGIFIATALSFK--------------------GL-RVAIVERNTLKGREQEWNISRKELLELVESGILVE 168 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~--------------------G~-rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~ 168 (546)
-.|+||||| .|+-+|..|++. |. +|.|++|...... ..+..++..|..+. .
T Consensus 148 ~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~----~f~~~elrel~~lp---~ 220 (456)
T 1lqt_A 148 ARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQA----AFTTLELRELADLD---G 220 (456)
T ss_dssp SEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGC----CCCHHHHHHGGGCT---T
T ss_pred CEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhh----ccChHHHHHhhcCC---C
Confidence 369999975 699999999874 65 9999998763221 24455544332221 0
Q ss_pred ccchhhhhhccCCCcccccCCccccccccccceeC--HHHHHHHHHHHHHh------cCCEEEeCceEEEEEEeCC--eE
Q 009027 169 DDIDEATATKFNPNRCGFEGKGEIWVEDILNLGVS--PAKLIEIVKKRFIS------LGGVIFEGYSVSSICTYEN--AA 238 (546)
Q Consensus 169 ~~ie~~i~~~~~~~~v~f~~~~~l~~~~~l~~~V~--~~~L~~~L~~~a~~------~G~~v~~~t~v~~i~~~~d--gv 238 (546)
.++ .+.+..+. ....... ...+ ..++.+.|.+.+.+ .|+++++++++.++..++. ++
T Consensus 221 ~~~------~~~~~~~~-~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v 287 (456)
T 1lqt_A 221 VDV------VIDPAELD-GITDEDA------AAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERI 287 (456)
T ss_dssp EEE------ECCGGGGT-TCCHHHH------HHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEE
T ss_pred cee------eeChHHhc-cchhhhh------hhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEE
Confidence 000 00000000 0000000 0011 12334566666655 6889999999998864422 23
Q ss_pred EEEE--------------cCC--cEEEcCEEEEecCCC
Q 009027 239 VLLL--------------AEG--KILSSHLIIDAMGNF 260 (546)
Q Consensus 239 ~V~~--------------~~g--~~i~ArlVV~ADG~~ 260 (546)
++.. .+| +++.|++||-|-|..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~ 325 (456)
T 1lqt_A 288 VLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGYR 325 (456)
T ss_dssp EEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCEE
T ss_pred EEEEEEecCCCcccccccCCCceEEEEcCEEEEccccc
Confidence 3331 123 357888888777754
No 284
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=93.58 E-value=0.034 Score=62.46 Aligned_cols=33 Identities=24% Similarity=0.368 Sum_probs=29.5
Q ss_pred cccEEEEcch-HHHHHHHHHHhCC--------CeEEEEcCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKG--------LRVAIVERNT 142 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G--------~rVlLlEr~~ 142 (546)
..+|+||||| +|+++|..|+++| ++|+|+|+..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~ 97 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADP 97 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccC
Confidence 4799999976 5999999999999 9999999886
No 285
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=93.38 E-value=0.32 Score=54.15 Aligned_cols=50 Identities=18% Similarity=0.282 Sum_probs=39.6
Q ss_pred HHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCC--cEEEcCEEEEecCCCh
Q 009027 209 EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEG--KILSSHLIIDAMGNFS 261 (546)
Q Consensus 209 ~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g--~~i~ArlVV~ADG~~S 261 (546)
..+.+.+++.|++++.+++++++. +++++++ .+| +++.++.||-|.|...
T Consensus 577 ~~~~~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 577 WIHRTTLLSRGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHHTTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHHhcCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCccc
Confidence 455667778899999999999875 5676665 566 5799999999999764
No 286
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=93.19 E-value=0.3 Score=50.42 Aligned_cols=50 Identities=14% Similarity=0.196 Sum_probs=38.8
Q ss_pred HHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEEcCCcEEEcCEEEEecCCC
Q 009027 207 LIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLLAEGKILSSHLIIDAMGNF 260 (546)
Q Consensus 207 L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~~~g~~i~ArlVV~ADG~~ 260 (546)
+.+.+.+.+++.|++++.++++++++ +++ |.+++|+++.+|+||-|.|..
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~--~~~--v~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIR--EHE--IVDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEEC--SSE--EEETTSCEEECSEEEEECCEE
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEEC--CCe--EEECCCCEEeeeEEEECCCCC
Confidence 34555666677899999999998874 344 566788899999999998854
No 287
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=92.62 E-value=0.62 Score=54.50 Aligned_cols=31 Identities=35% Similarity=0.262 Sum_probs=27.5
Q ss_pred cEEEEcch-HHHHHHHHHHhCCC-eEEEEcCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGL-RVAIVERNT 142 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~-rVlLlEr~~ 142 (546)
.|+||||| .|+=+|..+++.|. +|.|+++..
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 79999977 69999999999997 899999864
No 288
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=92.51 E-value=0.44 Score=53.64 Aligned_cols=93 Identities=17% Similarity=0.135 Sum_probs=63.5
Q ss_pred cEEEEc--ch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccC
Q 009027 112 DVIVCG--GT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEG 188 (546)
Q Consensus 112 DVIIVG--Gg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~ 188 (546)
.|+||| || .|+-+|..|++.|.+|.|+++.+ .... . . +
T Consensus 530 ~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~------------~-----------------~-------~-- 570 (729)
T 1o94_A 530 RVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANY------------M-----------------H-------F-- 570 (729)
T ss_dssp EEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHH------------H-----------------H-------H--
T ss_pred eEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-cccc------------c-----------------c-------c--
Confidence 699997 55 69999999999999999999875 2100 0 0 0
Q ss_pred CccccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEE--cCC-cE------------------
Q 009027 189 KGEIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AEG-KI------------------ 247 (546)
Q Consensus 189 ~~~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~--~~g-~~------------------ 247 (546)
.. +. ..+.+.+.+.|++++.+++++++. +++++++. .++ ++
T Consensus 571 ~~------------~~----~~~~~~l~~~GV~i~~~~~v~~i~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (729)
T 1o94_A 571 TL------------EY----PNMMRRLHELHVEELGDHFCSRIE--PGRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRW 632 (729)
T ss_dssp TT------------CH----HHHHHHHHHTTCEEECSEEEEEEE--TTEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEE
T ss_pred cc------------cH----HHHHHHHHhCCCEEEcCcEEEEEE--CCeEEEEEecCCceEEecccccccccccCCccee
Confidence 00 01 223445567899999999999875 45666653 232 22
Q ss_pred EEcCEEEEecCCCh
Q 009027 248 LSSHLIIDAMGNFS 261 (546)
Q Consensus 248 i~ArlVV~ADG~~S 261 (546)
+.|+.||-|.|..+
T Consensus 633 i~aD~Vv~a~G~~p 646 (729)
T 1o94_A 633 IEFDSLVLVTGRHS 646 (729)
T ss_dssp EECSEEEEESCEEE
T ss_pred eeCCEEEECCCCCC
Confidence 88999999988654
No 289
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=92.29 E-value=0.15 Score=44.53 Aligned_cols=32 Identities=16% Similarity=0.421 Sum_probs=28.5
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-.|+|+| |..|..+|..|.+.|++|+++|+.+
T Consensus 8 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3599999 5589999999999999999999875
No 290
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=92.10 E-value=0.14 Score=45.59 Aligned_cols=32 Identities=31% Similarity=0.472 Sum_probs=28.4
Q ss_pred ccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 111 FDVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 111 yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-.|+|+|+ ..|..+|..|.+.|++|.++|+.+
T Consensus 20 ~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 20 KYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 36999994 579999999999999999999875
No 291
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=92.00 E-value=0.16 Score=53.35 Aligned_cols=31 Identities=16% Similarity=0.090 Sum_probs=27.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCe-EEEEcCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLR-VAIVERNT 142 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~r-VlLlEr~~ 142 (546)
.|+||||| .|+=+|..|++.|.+ |.|++|..
T Consensus 214 ~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 214 SVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp CEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred EEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 69999976 699999999999999 99999875
No 292
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=91.82 E-value=0.3 Score=56.84 Aligned_cols=93 Identities=16% Similarity=0.168 Sum_probs=66.0
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCcccchhhhhhccCCCcccccCCc
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVEDDIDEATATKFNPNRCGFEGKG 190 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~~~ie~~i~~~~~~~~v~f~~~~ 190 (546)
.|+||||| .|+-+|..|++.|.+|.|+|+.+... .
T Consensus 286 ~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~--------~------------------------------------ 321 (965)
T 2gag_A 286 RIAVATTNDSAYELVRELAATGGVVAVIDARSSIS--------A------------------------------------ 321 (965)
T ss_dssp SEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC--------H------------------------------------
T ss_pred eEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc--------h------------------------------------
Confidence 59999965 69999999999999999999764210 0
Q ss_pred cccccccccceeCHHHHHHHHHHHHHhcCCEEEeCceEEEEEEe-CCeE-EEEEcC-------C--cEEEcCEEEEecCC
Q 009027 191 EIWVEDILNLGVSPAKLIEIVKKRFISLGGVIFEGYSVSSICTY-ENAA-VLLLAE-------G--KILSSHLIIDAMGN 259 (546)
Q Consensus 191 ~l~~~~~l~~~V~~~~L~~~L~~~a~~~G~~v~~~t~v~~i~~~-~dgv-~V~~~~-------g--~~i~ArlVV~ADG~ 259 (546)
. .+++++.|++++.+++++++..+ ++.+ .|.+.+ | +++.++.||-|.|.
T Consensus 322 --------------~------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 322 --------------A------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp --------------H------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred --------------h------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 0 13345679999999999998763 3432 344432 4 58999999999996
Q ss_pred Ch--HHHHHhc
Q 009027 260 FS--PVVKQIR 268 (546)
Q Consensus 260 ~S--~vr~ql~ 268 (546)
.. .+.++.+
T Consensus 382 ~P~~~l~~~~~ 392 (965)
T 2gag_A 382 NPVVHLHSQRQ 392 (965)
T ss_dssp EECCHHHHHTT
T ss_pred CcChHHHHhCC
Confidence 43 3455543
No 293
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.55 E-value=0.15 Score=44.35 Aligned_cols=31 Identities=26% Similarity=0.460 Sum_probs=27.7
Q ss_pred cEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|+|+|+ ..|..+|..|+++|++|.++|+.+
T Consensus 8 ~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 8 EYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 5999995 589999999999999999999864
No 294
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=91.10 E-value=0.19 Score=43.16 Aligned_cols=32 Identities=25% Similarity=0.469 Sum_probs=28.0
Q ss_pred ccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 111 FDVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 111 yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
..|+|+|+ ..|..+|..|++.|++|.++|+.+
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 46999995 579999999999999999999753
No 295
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=90.74 E-value=0.54 Score=49.78 Aligned_cols=31 Identities=19% Similarity=0.119 Sum_probs=27.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|+||||| .|+=+|..|++.|.+|.++++.+
T Consensus 199 ~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 199 TVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred EEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 59999976 69999999999999999999765
No 296
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=90.38 E-value=0.26 Score=51.65 Aligned_cols=36 Identities=31% Similarity=0.498 Sum_probs=31.8
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~ 145 (546)
+|||+||||| .|+++|+.|+++|++|+|+|++..++
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~g 42 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYG 42 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCcc
Confidence 6999999976 58899999999999999999987554
No 297
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=90.30 E-value=0.37 Score=51.45 Aligned_cols=37 Identities=27% Similarity=0.492 Sum_probs=32.7
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~ 145 (546)
.+|||||||+| .|+++|+.|+++|++|+|+||+...+
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~G 56 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYG 56 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCC
Confidence 46999999976 58899999999999999999997654
No 298
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=89.95 E-value=1.6 Score=45.52 Aligned_cols=55 Identities=13% Similarity=0.110 Sum_probs=39.3
Q ss_pred HHHHHHHHhcCCEEEeCceEEEEEEeCCeEEEEE--cC-----CcEEEcCEEEEecCC--ChHHHH
Q 009027 209 EIVKKRFISLGGVIFEGYSVSSICTYENAAVLLL--AE-----GKILSSHLIIDAMGN--FSPVVK 265 (546)
Q Consensus 209 ~~L~~~a~~~G~~v~~~t~v~~i~~~~dgv~V~~--~~-----g~~i~ArlVV~ADG~--~S~vr~ 265 (546)
+.+.+.+++.|++++.++++++++ +++++++. .+ ++++.+++||-|.|. ..++..
T Consensus 212 ~~~~~~l~~~gI~~~~~~~v~~v~--~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~~~~~~~ 275 (437)
T 3sx6_A 212 GILTKGLKEEGIEAYTNCKVTKVE--DNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKGVPAVAG 275 (437)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEE--TTEEEEEEECTTSCEEEEEEEECSEEEEECCEECCHHHHT
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEE--CCeEEEEecccCCccccceEEEEeEEEEcCCCcCchhhhc
Confidence 445566677899999999998874 56666653 22 457999999999873 345553
No 299
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=89.51 E-value=0.26 Score=40.77 Aligned_cols=32 Identities=25% Similarity=0.553 Sum_probs=28.0
Q ss_pred ccEEEEc-chHHHHHHHHHHhCC-CeEEEEcCCC
Q 009027 111 FDVIVCG-GTLGIFIATALSFKG-LRVAIVERNT 142 (546)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LA~~G-~rVlLlEr~~ 142 (546)
-.|+|+| |++|..+|..|.+.| ++|.+++|.+
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 4699999 468999999999999 9999999864
No 300
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=89.48 E-value=0.36 Score=50.94 Aligned_cols=35 Identities=34% Similarity=0.338 Sum_probs=30.3
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCC-eEEEEcCCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGL-RVAIVERNTLK 144 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~-rVlLlEr~~~~ 144 (546)
.+||+||||| +|+++|..|+++|+ +|+|+|+...+
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~ 40 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHI 40 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCC
Confidence 6899999976 59999999999999 89999997654
No 301
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=89.37 E-value=0.24 Score=49.32 Aligned_cols=31 Identities=19% Similarity=0.302 Sum_probs=26.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-.|+||||| .|+-+|..|++.| +|.++.+..
T Consensus 164 ~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 164 MRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 369999976 6999999999998 799999774
No 302
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=88.98 E-value=0.32 Score=41.72 Aligned_cols=31 Identities=32% Similarity=0.368 Sum_probs=27.5
Q ss_pred cEEEEc-chHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVG-Gg~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|+|+| |..|..+|..|++.|++|.++|+.+
T Consensus 8 ~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 8 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 499999 5689999999999999999999763
No 303
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=88.96 E-value=0.3 Score=47.44 Aligned_cols=33 Identities=24% Similarity=0.478 Sum_probs=29.2
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCC-eEEEEcCCCC
Q 009027 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (546)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LA~~G~-rVlLlEr~~~ 143 (546)
..|+|+| ||+|..+|..|++.|. ++.|+|+...
T Consensus 32 ~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 32 SRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 4699999 7899999999999998 8999998753
No 304
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=88.95 E-value=0.4 Score=42.33 Aligned_cols=31 Identities=29% Similarity=0.480 Sum_probs=27.6
Q ss_pred cEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|+|+|+ ..|...|..|.+.|++|+++|+.+
T Consensus 5 ~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 5 HFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 5899995 579999999999999999999863
No 305
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=88.73 E-value=0.64 Score=48.96 Aligned_cols=37 Identities=27% Similarity=0.430 Sum_probs=32.9
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~ 145 (546)
.+||||||||| .|+++|+.|+++|++|+|+|++..++
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~G 47 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYG 47 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCC
Confidence 36999999976 58899999999999999999998765
No 306
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=88.36 E-value=0.29 Score=44.60 Aligned_cols=31 Identities=23% Similarity=0.285 Sum_probs=27.8
Q ss_pred cEEEEc-chHHHHHHHHHHhC-CCeEEEEcCCC
Q 009027 112 DVIVCG-GTLGIFIATALSFK-GLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVG-Gg~G~~~Aa~LA~~-G~rVlLlEr~~ 142 (546)
.|+|+| |.+|..+|..|.+. |++|.++|+.+
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 599999 56899999999999 99999999864
No 307
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.90 E-value=0.39 Score=45.12 Aligned_cols=31 Identities=23% Similarity=0.510 Sum_probs=27.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|+|+|+| .|..+|..|.++|++|+++|+.+
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 38999965 79999999999999999999764
No 308
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=87.28 E-value=0.44 Score=48.15 Aligned_cols=31 Identities=26% Similarity=0.435 Sum_probs=27.9
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|.|||+| +|.-.|..+|++|++|.|+|..+
T Consensus 8 ~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999965 79999999999999999999765
No 309
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=87.10 E-value=0.55 Score=46.60 Aligned_cols=31 Identities=32% Similarity=0.472 Sum_probs=27.8
Q ss_pred cEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|.|||+ .+|..+|..|+++|++|.++|+.+
T Consensus 17 ~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 17 HVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 5999995 579999999999999999999875
No 310
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=86.82 E-value=0.93 Score=45.62 Aligned_cols=44 Identities=18% Similarity=0.167 Sum_probs=33.6
Q ss_pred cEEEEc-chHHHH-HHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCC
Q 009027 112 DVIVCG-GTLGIF-IATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGI 165 (546)
Q Consensus 112 DVIIVG-Gg~G~~-~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl 165 (546)
-|.|+| ||.|++ +|..|+++|++|.+.|+...+. ..+.|++.|+
T Consensus 6 ~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~~~----------~~~~L~~~gi 51 (326)
T 3eag_A 6 HIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMYPP----------MSTQLEALGI 51 (326)
T ss_dssp EEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCCTT----------HHHHHHHTTC
T ss_pred EEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCCcH----------HHHHHHhCCC
Confidence 589999 789997 6778889999999999875422 2345666675
No 311
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=86.82 E-value=0.59 Score=46.85 Aligned_cols=31 Identities=29% Similarity=0.554 Sum_probs=27.7
Q ss_pred cEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|.|+|+ ..|++.|..|+++|++|.+++|.+
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 4 NILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp EEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 5899995 579999999999999999999864
No 312
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=86.77 E-value=0.45 Score=46.90 Aligned_cols=32 Identities=28% Similarity=0.258 Sum_probs=28.4
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
.|+||||| .|+-+|..|++.|.+|.|+|+.+.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 59999976 699999999999999999998753
No 313
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=86.53 E-value=0.53 Score=46.36 Aligned_cols=31 Identities=39% Similarity=0.503 Sum_probs=27.7
Q ss_pred cEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|.|||+ .+|..+|..|+++|++|.++|+.+
T Consensus 6 kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 6 NVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4899995 579999999999999999999875
No 314
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=86.39 E-value=0.54 Score=46.08 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=28.8
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
-.|+||||| .|+-+|..|++.|.+|.|+||...
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~ 186 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDA 186 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeeccccc
Confidence 369999976 699999999999999999998654
No 315
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=85.33 E-value=0.76 Score=44.58 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|-|| |+|..+|..|++.|.+|++.++..
T Consensus 5 vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~ 36 (247)
T 3ged_A 5 VIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE 36 (247)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788885 799999999999999999999864
No 316
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=85.30 E-value=0.8 Score=44.56 Aligned_cols=30 Identities=33% Similarity=0.285 Sum_probs=27.2
Q ss_pred EEEEcc-hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|.|+|+ .+|...|..|+++|++|.+++|.+
T Consensus 3 i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 33 (291)
T 1ks9_A 3 ITVLGCGALGQLWLTALCKQGHEVQGWLRVP 33 (291)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEECcCHHHHHHHHHHHhCCCCEEEEEcCc
Confidence 889995 479999999999999999999875
No 317
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=85.23 E-value=0.67 Score=46.26 Aligned_cols=31 Identities=23% Similarity=0.442 Sum_probs=27.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|.|+|+| .|++.|..|+++|++|.+++|.+
T Consensus 4 kI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 4 RIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 58999955 69999999999999999999864
No 318
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.92 E-value=0.78 Score=44.10 Aligned_cols=30 Identities=33% Similarity=0.402 Sum_probs=27.2
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 10 vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 41 (252)
T 3h7a_A 10 VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNG 41 (252)
T ss_dssp EEEECCSSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 789999999999999999999865
No 319
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=84.71 E-value=0.63 Score=49.42 Aligned_cols=54 Identities=19% Similarity=0.170 Sum_probs=38.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCCCCc
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGILVE 168 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl~~~ 168 (546)
--|.|||+| +|..+|..|+++|++|.++|+.+. +..+.....++.+.+.|.++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e----~a~~~i~~~l~~~~~~G~l~~ 109 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ----RCKQELEVMYAREKSFKRLND 109 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH----HHHHHHHHHHHHHHHTTSCCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH----HHHHHHHHHHHHHHHcCCCCH
Confidence 359999965 699999999999999999998864 111111234555666776654
No 320
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=84.69 E-value=0.48 Score=47.67 Aligned_cols=31 Identities=29% Similarity=0.416 Sum_probs=24.8
Q ss_pred EEEEc-chHHHH-----HHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCG-GTLGIF-----IATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVG-Gg~G~~-----~Aa~LA~~G~rVlLlEr~~~ 143 (546)
++|.| ||+|=+ +|++||+.|.||+|||-.+.
T Consensus 51 IAIaGKGGVGKTTtavNLA~aLA~~GkkVllID~Dpq 87 (314)
T 3fwy_A 51 FAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDPK 87 (314)
T ss_dssp EEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEESSS
T ss_pred EEEECCCccCHHHHHHHHHHHHHHCCCeEEEEecCCC
Confidence 56668 887654 67788999999999997753
No 321
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=84.63 E-value=0.85 Score=42.94 Aligned_cols=30 Identities=20% Similarity=0.372 Sum_probs=27.1
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 35 (230)
T 3guy_A 4 IVITGASSGLGAELAKLYDAEGKATYLTGRSE 35 (230)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 789999999999999999999864
No 322
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=84.48 E-value=0.89 Score=43.21 Aligned_cols=30 Identities=30% Similarity=0.491 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 6 vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~ 37 (235)
T 3l6e_A 6 IIVTGAGSGLGRALTIGLVERGHQVSMMGRRY 37 (235)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 788894 789999999999999999999864
No 323
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=84.39 E-value=2.1 Score=41.55 Aligned_cols=33 Identities=24% Similarity=0.231 Sum_probs=28.6
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
-|+|.|| |+|..+|..|+++|.+|+++++....
T Consensus 12 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~ 46 (287)
T 3pxx_A 12 VVLVTGGARGQGRSHAVKLAEEGADIILFDICHDI 46 (287)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccc
Confidence 3888895 78999999999999999999987543
No 324
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=84.28 E-value=0.76 Score=46.35 Aligned_cols=31 Identities=26% Similarity=0.435 Sum_probs=27.9
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|.|||+| .|...|..|+++|++|.++|+.+
T Consensus 8 kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 8 DVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred eEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999955 79999999999999999999875
No 325
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=84.28 E-value=0.86 Score=44.20 Aligned_cols=33 Identities=24% Similarity=0.421 Sum_probs=28.6
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCC-eEEEEcCCCC
Q 009027 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (546)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LA~~G~-rVlLlEr~~~ 143 (546)
..|+|+| ||+|+.+|..|++.|+ ++.|+|....
T Consensus 29 ~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 29 SQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred CcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 4699999 7899999999999998 7789987653
No 326
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=83.78 E-value=1 Score=43.62 Aligned_cols=31 Identities=29% Similarity=0.392 Sum_probs=27.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
++|-|| |+|..+|..|++.|.+|++.+|...
T Consensus 14 alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~ 46 (242)
T 4b79_A 14 VLVTGGSSGIGAAIAMQFAELGAEVVALGLDAD 46 (242)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 677785 7999999999999999999998764
No 327
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=83.77 E-value=0.85 Score=44.87 Aligned_cols=31 Identities=16% Similarity=0.354 Sum_probs=27.5
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|.|+|+| +|..+|..|+++|++|.+++|.+
T Consensus 5 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 58999954 79999999999999999999764
No 328
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=83.76 E-value=2.2 Score=41.96 Aligned_cols=31 Identities=16% Similarity=0.216 Sum_probs=27.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
++|.|| |+|..+|..|+++|.+|+++++.+.
T Consensus 31 ~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~ 63 (299)
T 3t7c_A 31 AFITGAARGQGRSHAITLAREGADIIAIDVCKQ 63 (299)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEecccc
Confidence 888894 7899999999999999999998754
No 329
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=83.76 E-value=1.5 Score=42.57 Aligned_cols=30 Identities=27% Similarity=0.455 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 30 ~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 61 (277)
T 4fc7_A 30 AFITGGGSGIGFRIAEIFMRHGCHTVIASRSL 61 (277)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEESCH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 789999999999999999999874
No 330
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=83.74 E-value=1 Score=43.28 Aligned_cols=31 Identities=26% Similarity=0.333 Sum_probs=27.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
++|.|| |+|..+|..|+++|.+|++++|...
T Consensus 10 ~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 42 (257)
T 3tpc_A 10 FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPP 42 (257)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 788894 7899999999999999999998764
No 331
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=83.68 E-value=1.1 Score=41.95 Aligned_cols=32 Identities=16% Similarity=0.340 Sum_probs=28.3
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
..|.|+|.| +|.++|..|+++|++|.+++|.+
T Consensus 20 ~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 20 MEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 469999955 79999999999999999999875
No 332
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=83.62 E-value=1 Score=43.15 Aligned_cols=33 Identities=18% Similarity=0.303 Sum_probs=28.9
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
-|+|.|| |+|..+|..|+++|++|++++|....
T Consensus 24 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~ 58 (251)
T 3orf_A 24 NILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP 58 (251)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 3888894 68999999999999999999988754
No 333
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=83.53 E-value=1 Score=43.19 Aligned_cols=31 Identities=26% Similarity=0.340 Sum_probs=27.2
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
=|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 14 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 46 (252)
T 3f1l_A 14 IILVTGASDGIGREAAMTYARYGATVILLGRNE 46 (252)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3788884 789999999999999999999864
No 334
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=83.37 E-value=0.94 Score=45.64 Aligned_cols=30 Identities=17% Similarity=0.529 Sum_probs=26.9
Q ss_pred cEEEEcc-hHHHHHHHHHHhCCCeEEEEcCC
Q 009027 112 DVIVCGG-TLGIFIATALSFKGLRVAIVERN 141 (546)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~ 141 (546)
.|.|+|+ ..|++.|..|+++|++|.+++|.
T Consensus 5 kI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 5 RICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 5899995 57999999999999999999974
No 335
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=83.35 E-value=1 Score=42.95 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (247)
T 3dii_A 5 VIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE 36 (247)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 789999999999999999999864
No 336
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=83.29 E-value=1 Score=43.79 Aligned_cols=30 Identities=37% Similarity=0.490 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 33 vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~ 64 (281)
T 3ppi_A 33 AIVSGGAGGLGEATVRRLHADGLGVVIADLAA 64 (281)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCh
Confidence 888895 789999999999999999999864
No 337
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=83.08 E-value=1.1 Score=43.54 Aligned_cols=31 Identities=23% Similarity=0.405 Sum_probs=27.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
|+|.|| |+|..+|..|+++|.+|++++|...
T Consensus 14 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 46 (271)
T 3tzq_B 14 AIITGACGGIGLETSRVLARAGARVVLADLPET 46 (271)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECTTS
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 788894 7899999999999999999998753
No 338
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=82.78 E-value=0.97 Score=45.03 Aligned_cols=33 Identities=24% Similarity=0.529 Sum_probs=29.0
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCC-eEEEEcCCCC
Q 009027 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (546)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LA~~G~-rVlLlEr~~~ 143 (546)
.-|+||| ||+|+.+|..||+.|+ ++.|+|....
T Consensus 37 ~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 37 FAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 5699999 7899999999999997 7889997754
No 339
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=82.76 E-value=1.1 Score=42.49 Aligned_cols=32 Identities=28% Similarity=0.339 Sum_probs=28.2
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
-|+|.|| |+|..+|..|+++|++|.+++|...
T Consensus 9 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 42 (241)
T 1dhr_A 9 RVLVYGGRGALGSRCVQAFRARNWWVASIDVVEN 42 (241)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 3888894 7899999999999999999998764
No 340
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=82.74 E-value=0.99 Score=48.14 Aligned_cols=33 Identities=15% Similarity=0.374 Sum_probs=28.9
Q ss_pred cccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 110 TFDVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 110 ~yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
...|.|||. -+|+.+|..||++|++|.++|+.+
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 357999995 579999999999999999999764
No 341
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=82.74 E-value=1.2 Score=42.61 Aligned_cols=31 Identities=29% Similarity=0.443 Sum_probs=27.3
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 8 ~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~ 40 (247)
T 3rwb_A 8 TALVTGAAQGIGKAIAARLAADGATVIVSDINA 40 (247)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3888894 789999999999999999999864
No 342
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=82.68 E-value=0.98 Score=43.91 Aligned_cols=33 Identities=30% Similarity=0.412 Sum_probs=27.8
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
-|+|.|| |+|..+|..|+++|.+|++++|....
T Consensus 16 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~ 50 (269)
T 3vtz_A 16 VAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKS 50 (269)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchh
Confidence 4888894 78999999999999999999987643
No 343
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=82.64 E-value=0.98 Score=44.10 Aligned_cols=31 Identities=16% Similarity=0.194 Sum_probs=27.3
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
++|-|| |+|.++|..|++.|.+|++.+|...
T Consensus 14 alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~ 46 (261)
T 4h15_A 14 ALITAGTKGAGAATVSLFLELGAQVLTTARARP 46 (261)
T ss_dssp EEESCCSSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEeccCcHHHHHHHHHHHHcCCEEEEEECCch
Confidence 677784 7999999999999999999998754
No 344
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=82.55 E-value=1.2 Score=42.76 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=27.6
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 11 ~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~ 43 (261)
T 3n74_A 11 VALITGAGSGFGEGMAKRFAKGGAKVVIVDRDK 43 (261)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3888894 689999999999999999999874
No 345
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=82.45 E-value=1.2 Score=42.90 Aligned_cols=30 Identities=33% Similarity=0.484 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 11 ~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~ 42 (255)
T 4eso_A 11 AIVIGGTHGMGLATVRRLVEGGAEVLLTGRNE 42 (255)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 789999999999999999999864
No 346
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=82.43 E-value=1 Score=42.78 Aligned_cols=30 Identities=27% Similarity=0.467 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 17 vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~ 48 (247)
T 3i1j_A 17 ILVTGAARGIGAAAARAYAAHGASVVLLGRTE 48 (247)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEecCH
Confidence 888894 789999999999999999999874
No 347
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=82.41 E-value=1.2 Score=43.28 Aligned_cols=33 Identities=24% Similarity=0.447 Sum_probs=28.7
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
-|+|.|| |+|..+|..|+++|.+|++++|....
T Consensus 8 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~ 42 (274)
T 3e03_A 8 TLFITGASRGIGLAIALRAARDGANVAIAAKSAVA 42 (274)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeccchh
Confidence 3888894 78999999999999999999988643
No 348
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=82.41 E-value=1.2 Score=41.86 Aligned_cols=30 Identities=30% Similarity=0.473 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 5 vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (235)
T 3l77_A 5 AVITGASRGIGEAIARALARDGYALALGARSV 36 (235)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 789999999999999999999864
No 349
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=82.40 E-value=1.2 Score=42.35 Aligned_cols=31 Identities=13% Similarity=0.293 Sum_probs=27.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
|+|.|| |+|..+|..|+++|++|.+++|...
T Consensus 4 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~ 36 (257)
T 1fjh_A 4 IVISGCATGIGAATRKVLEAAGHQIVGIDIRDA 36 (257)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCch
Confidence 788894 7899999999999999999998753
No 350
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=82.39 E-value=0.98 Score=43.71 Aligned_cols=31 Identities=29% Similarity=0.444 Sum_probs=27.6
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 29 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 61 (260)
T 3gem_A 29 PILITGASQRVGLHCALRLLEHGHRVIISYRTE 61 (260)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 3888894 789999999999999999999875
No 351
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=82.32 E-value=0.97 Score=43.39 Aligned_cols=30 Identities=33% Similarity=0.653 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
++|.|| |+|..+|..|+++|.+|++++|..
T Consensus 10 ~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 41 (250)
T 3nyw_A 10 AIITGASQGIGAVIAAGLATDGYRVVLIARSK 41 (250)
T ss_dssp EEEESTTSHHHHHHHHHHHHHTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 788894 789999999999999999999864
No 352
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=82.32 E-value=0.75 Score=45.49 Aligned_cols=31 Identities=23% Similarity=0.291 Sum_probs=27.7
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|.|+|+| .|++.|..|+++|++|.+++|.+
T Consensus 4 kI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 4 SVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred EEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 58999954 79999999999999999999874
No 353
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=82.24 E-value=1.2 Score=43.23 Aligned_cols=32 Identities=19% Similarity=0.180 Sum_probs=28.0
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
=|+|.|| |+|..+|..|+++|++|+++++...
T Consensus 15 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 48 (278)
T 3sx2_A 15 VAFITGAARGQGRAHAVRLAADGADIIAVDLCDQ 48 (278)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCeEEEEecccc
Confidence 3888894 7899999999999999999998753
No 354
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=82.21 E-value=1.1 Score=42.39 Aligned_cols=32 Identities=31% Similarity=0.407 Sum_probs=28.2
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
|+|.|| |+|..+|..|+++|++|++++|....
T Consensus 6 vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~ 39 (236)
T 1ooe_A 6 VIVYGGKGALGSAILEFFKKNGYTVLNIDLSAND 39 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCT
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEecCccc
Confidence 788894 68999999999999999999987643
No 355
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=82.17 E-value=1.2 Score=43.81 Aligned_cols=30 Identities=27% Similarity=0.470 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
++|-|| |+|.++|..|++.|.+|++.+|..
T Consensus 32 alVTGas~GIG~aiA~~la~~Ga~V~i~~r~~ 63 (273)
T 4fgs_A 32 AVITGATSGIGLAAAKRFVAEGARVFITGRRK 63 (273)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCcCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 677785 799999999999999999999864
No 356
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=82.11 E-value=1.2 Score=43.44 Aligned_cols=31 Identities=23% Similarity=0.211 Sum_probs=27.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
|+|.|| |+|..+|..|+++|.+|+++++...
T Consensus 14 ~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~ 46 (286)
T 3uve_A 14 AFVTGAARGQGRSHAVRLAQEGADIIAVDICKP 46 (286)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred EEEeCCCchHHHHHHHHHHHCCCeEEEEecccc
Confidence 888894 7899999999999999999998753
No 357
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=81.98 E-value=1 Score=44.02 Aligned_cols=31 Identities=26% Similarity=0.296 Sum_probs=27.3
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
|+|.|| |+|..+|..|+++|.+|++++|...
T Consensus 36 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~ 68 (275)
T 4imr_A 36 ALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPG 68 (275)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 778884 7899999999999999999998653
No 358
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=81.96 E-value=1.3 Score=41.92 Aligned_cols=30 Identities=50% Similarity=0.719 Sum_probs=27.1
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 5 vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~ 36 (239)
T 2ekp_A 5 ALVTGGSRGIGRAIAEALVARGYRVAIASRNP 36 (239)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 789999999999999999999875
No 359
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=81.89 E-value=1.3 Score=43.30 Aligned_cols=31 Identities=19% Similarity=0.217 Sum_probs=27.7
Q ss_pred cEEEEc-chHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVG-Gg~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|+| ||+|.++|..|++.|.+|.+++|..
T Consensus 121 ~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 121 RILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred EEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 599999 6789999999999999999998763
No 360
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=81.86 E-value=1.2 Score=43.43 Aligned_cols=30 Identities=30% Similarity=0.440 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 30 vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 61 (277)
T 4dqx_A 30 CIVTGGGSGIGRATAELFAKNGAYVVVADVNE 61 (277)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 789999999999999999999764
No 361
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=81.83 E-value=1.2 Score=43.43 Aligned_cols=31 Identities=26% Similarity=0.452 Sum_probs=27.4
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 34 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 66 (276)
T 3r1i_A 34 RALITGASTGIGKKVALAYAEAGAQVAVAARHS 66 (276)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3788894 789999999999999999999864
No 362
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=81.82 E-value=1 Score=43.72 Aligned_cols=30 Identities=23% Similarity=0.454 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 7 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 38 (264)
T 3tfo_A 7 ILITGASGGIGEGIARELGVAGAKILLGARRQ 38 (264)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEeCCccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 788884 789999999999999999999874
No 363
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=81.82 E-value=1.3 Score=43.31 Aligned_cols=30 Identities=27% Similarity=0.451 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 27 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 58 (279)
T 3sju_A 27 AFVTGVSSGIGLAVARTLAARGIAVYGCARDA 58 (279)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 789999999999999999999864
No 364
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=81.82 E-value=1.3 Score=43.37 Aligned_cols=30 Identities=27% Similarity=0.594 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 8 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 39 (281)
T 3zv4_A 8 ALITGGASGLGRALVDRFVAEGARVAVLDKSA 39 (281)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH
Confidence 788884 799999999999999999999864
No 365
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=81.81 E-value=1.3 Score=42.23 Aligned_cols=30 Identities=27% Similarity=0.510 Sum_probs=27.1
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|.+
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (249)
T 2ew8_A 10 AVITGGANGIGRAIAERFAVEGADIAIADLVP 41 (249)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCc
Confidence 888894 789999999999999999999875
No 366
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=81.71 E-value=1.3 Score=42.79 Aligned_cols=30 Identities=30% Similarity=0.460 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 11 ~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~ 42 (265)
T 3lf2_A 11 AVVTGGSSGIGLATVELLLEAGAAVAFCARDG 42 (265)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999999864
No 367
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=81.65 E-value=1.4 Score=44.86 Aligned_cols=33 Identities=33% Similarity=0.655 Sum_probs=28.6
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCC-eEEEEcCCCC
Q 009027 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (546)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LA~~G~-rVlLlEr~~~ 143 (546)
.-|+||| ||+|+.+|..|++.|+ ++.|+|....
T Consensus 35 ~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 35 TKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 4699999 7899999999999998 6778897754
No 368
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=81.53 E-value=1.4 Score=41.59 Aligned_cols=31 Identities=19% Similarity=0.345 Sum_probs=27.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
|+|.|| ++|..+|..|+++|++|.+++|.+.
T Consensus 4 vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~ 36 (255)
T 2dkn_A 4 IAITGSASGIGAALKELLARAGHTVIGIDRGQA 36 (255)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 788994 6899999999999999999998753
No 369
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=81.50 E-value=1.4 Score=42.07 Aligned_cols=31 Identities=32% Similarity=0.379 Sum_probs=27.4
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 11 ~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~ 43 (253)
T 3qiv_A 11 VGIVTGSGGGIGQAYAEALAREGAAVVVADINA 43 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3888894 789999999999999999999864
No 370
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=81.48 E-value=1.1 Score=43.19 Aligned_cols=30 Identities=40% Similarity=0.602 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 9 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 40 (257)
T 3imf_A 9 VIITGGSSGMGKGMATRFAKEGARVVITGRTK 40 (257)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999999864
No 371
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=81.48 E-value=1.3 Score=43.06 Aligned_cols=32 Identities=31% Similarity=0.443 Sum_probs=28.1
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
|+|.|| |+|..+|..|+++|.+|++++|....
T Consensus 13 ~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~ 46 (281)
T 3s55_A 13 ALITGGARGMGRSHAVALAEAGADIAICDRCENS 46 (281)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCC
T ss_pred EEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccc
Confidence 888894 78999999999999999999987543
No 372
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=81.47 E-value=1.1 Score=47.31 Aligned_cols=46 Identities=26% Similarity=0.327 Sum_probs=35.1
Q ss_pred cEEEEc-chHHHHHHHHHHhCCCeEEEEcCCCCCCCcccccCCHHHHHHHHHcCC
Q 009027 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTLKGREQEWNISRKELLELVESGI 165 (546)
Q Consensus 112 DVIIVG-Gg~G~~~Aa~LA~~G~rVlLlEr~~~~~~~r~~~Is~~~l~~L~~lGl 165 (546)
-|.|+| |+.|.++|..|+++|++|.+.|++.... + ...+.|++.|+
T Consensus 11 ~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~~~~-------~-~~~~~L~~~gi 57 (451)
T 3lk7_A 11 KVLVLGLARSGEAAARLLAKLGAIVTVNDGKPFDE-------N-PTAQSLLEEGI 57 (451)
T ss_dssp EEEEECCTTTHHHHHHHHHHTTCEEEEEESSCGGG-------C-HHHHHHHHTTC
T ss_pred EEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCcccC-------C-hHHHHHHhCCC
Confidence 599999 7789999999999999999999875310 1 23346777775
No 373
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=81.43 E-value=1.1 Score=43.63 Aligned_cols=31 Identities=35% Similarity=0.523 Sum_probs=27.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
|+|.|| |+|..+|..|+++|.+|++++|...
T Consensus 31 vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~ 63 (266)
T 3uxy_A 31 ALVTGAAGGIGGAVVTALRAAGARVAVADRAVA 63 (266)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEECSSCCT
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 788884 7899999999999999999998754
No 374
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=81.41 E-value=0.53 Score=49.99 Aligned_cols=31 Identities=23% Similarity=0.382 Sum_probs=28.2
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|||||+| .|..+|..|...|++|+|||+.+
T Consensus 5 ~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp EEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 49999965 79999999999999999999875
No 375
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=81.35 E-value=1.3 Score=43.09 Aligned_cols=30 Identities=17% Similarity=0.238 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
++|.|| |+|..+|..|+++|.+|++++|..
T Consensus 14 ~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~ 45 (277)
T 3tsc_A 14 AFITGAARGQGRAHAVRMAAEGADIIAVDIAG 45 (277)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred EEEECCccHHHHHHHHHHHHcCCEEEEEeccc
Confidence 788894 789999999999999999999864
No 376
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=81.32 E-value=1.4 Score=43.42 Aligned_cols=31 Identities=26% Similarity=0.509 Sum_probs=27.4
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 49 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 81 (291)
T 3ijr_A 49 NVLITGGDSGIGRAVSIAFAKEGANIAIAYLDE 81 (291)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3888894 789999999999999999999874
No 377
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=81.31 E-value=1.1 Score=43.75 Aligned_cols=30 Identities=33% Similarity=0.570 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|+++.|..
T Consensus 15 vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~ 46 (311)
T 3o26_A 15 AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDV 46 (311)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEecCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 799999999999999999999874
No 378
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=81.31 E-value=1.3 Score=43.33 Aligned_cols=30 Identities=27% Similarity=0.442 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 31 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 62 (283)
T 3v8b_A 31 ALITGAGSGIGRATALALAADGVTVGALGRTR 62 (283)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999999764
No 379
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=81.28 E-value=1.2 Score=44.47 Aligned_cols=31 Identities=26% Similarity=0.351 Sum_probs=27.1
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
--|.|||.| +|...|..|+ +|++|.++|+.+
T Consensus 13 ~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 13 MKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 469999954 7999999999 999999999764
No 380
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=81.25 E-value=1.3 Score=42.66 Aligned_cols=31 Identities=23% Similarity=0.380 Sum_probs=27.2
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 13 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 45 (264)
T 3ucx_A 13 VVVISGVGPALGTTLARRCAEQGADLVLAARTV 45 (264)
T ss_dssp EEEEESCCTTHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCH
Confidence 3888894 789999999999999999999864
No 381
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=81.13 E-value=1.4 Score=42.95 Aligned_cols=30 Identities=40% Similarity=0.543 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 14 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 45 (281)
T 3svt_A 14 YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNP 45 (281)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 789999999999999999999864
No 382
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=81.10 E-value=1.4 Score=42.08 Aligned_cols=31 Identities=35% Similarity=0.489 Sum_probs=27.4
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 21 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 53 (249)
T 1o5i_A 21 GVLVLAASRGIGRAVADVLSQEGAEVTICARNE 53 (249)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3888894 789999999999999999999864
No 383
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=81.10 E-value=1 Score=47.37 Aligned_cols=33 Identities=15% Similarity=0.362 Sum_probs=28.3
Q ss_pred cEEEEc-chHHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 112 DVIIVG-Gg~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
-|.|+| |+.|+++|..|+++|++|.+.|....+
T Consensus 7 ~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred EEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 489999 678999998999999999999976543
No 384
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=81.08 E-value=1.2 Score=42.68 Aligned_cols=30 Identities=27% Similarity=0.364 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 12 ~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~ 43 (248)
T 3op4_A 12 ALVTGASRGIGKAIAELLAERGAKVIGTATSE 43 (248)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999999764
No 385
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=81.06 E-value=1.4 Score=42.80 Aligned_cols=31 Identities=26% Similarity=0.395 Sum_probs=27.2
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 18 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 50 (266)
T 3p19_A 18 LVVITGASSGIGEAIARRFSEEGHPLLLLARRV 50 (266)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3788884 789999999999999999999863
No 386
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=81.00 E-value=1.5 Score=41.93 Aligned_cols=31 Identities=32% Similarity=0.439 Sum_probs=27.2
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-++|.|| |+|..+|..|+++|++|++++|..
T Consensus 9 ~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 41 (247)
T 2jah_A 9 VALITGASSGIGEATARALAAEGAAVAIAARRV 41 (247)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3888894 789999999999999999999763
No 387
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=81.00 E-value=1.4 Score=41.89 Aligned_cols=30 Identities=40% Similarity=0.608 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| ++|..+|..|+++|++|.+++|..
T Consensus 16 vlItGasggiG~~la~~l~~~G~~V~~~~r~~ 47 (260)
T 3awd_A 16 AIVTGGAQNIGLACVTALAEAGARVIIADLDE 47 (260)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999999764
No 388
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=80.98 E-value=1.4 Score=42.80 Aligned_cols=30 Identities=33% Similarity=0.368 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
++|-|| |+|..+|..||+.|.+|++.+|..
T Consensus 10 alVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~ 41 (254)
T 4fn4_A 10 VIVTGAGSGIGRAIAKKFALNDSIVVAVELLE 41 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCCHHHHHHHHHHHHcCCEEEEEECCH
Confidence 677785 799999999999999999999864
No 389
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=80.98 E-value=1.4 Score=41.70 Aligned_cols=30 Identities=27% Similarity=0.556 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| ++|..+|..|+++|++|.+++|..
T Consensus 14 vlITGasggiG~~la~~l~~~G~~V~~~~r~~ 45 (254)
T 2wsb_A 14 AAVTGAGSGIGLEICRAFAASGARLILIDREA 45 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999999864
No 390
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=80.92 E-value=1.4 Score=42.23 Aligned_cols=30 Identities=27% Similarity=0.399 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 11 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 42 (259)
T 4e6p_A 11 ALITGSARGIGRAFAEAYVREGATVAIADIDI 42 (259)
T ss_dssp EEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 789999999999999999999764
No 391
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=80.81 E-value=1.4 Score=43.72 Aligned_cols=32 Identities=19% Similarity=0.346 Sum_probs=28.0
Q ss_pred ccEEEEcc-hHHHHHHHHHHhCCC--eEEEEcCCC
Q 009027 111 FDVIVCGG-TLGIFIATALSFKGL--RVAIVERNT 142 (546)
Q Consensus 111 yDVIIVGG-g~G~~~Aa~LA~~G~--rVlLlEr~~ 142 (546)
.-|+|+|+ .+|..+|..|++.|+ +|.++|+..
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 36999995 479999999999999 999999864
No 392
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=80.72 E-value=1.4 Score=43.05 Aligned_cols=33 Identities=27% Similarity=0.539 Sum_probs=28.7
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
-|+|.|| |+|..+|..|+++|++|++++|....
T Consensus 11 ~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~ 45 (285)
T 3sc4_A 11 TMFISGGSRGIGLAIAKRVAADGANVALVAKSAEP 45 (285)
T ss_dssp EEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhh
Confidence 3788894 78999999999999999999988653
No 393
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=80.72 E-value=1.5 Score=42.36 Aligned_cols=32 Identities=28% Similarity=0.291 Sum_probs=28.1
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
|+|.|| |+|..+|..|+++|++|++++|....
T Consensus 11 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~ 44 (264)
T 2dtx_A 11 VIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG 44 (264)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc
Confidence 888894 78999999999999999999987643
No 394
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=80.68 E-value=1.4 Score=42.90 Aligned_cols=31 Identities=16% Similarity=0.179 Sum_probs=27.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
|+|.|| |+|..+|..|+++|.+|++++|...
T Consensus 18 ~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~ 50 (280)
T 3pgx_A 18 AFITGAARGQGRSHAVRLAAEGADIIACDICAP 50 (280)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEecccc
Confidence 888894 7899999999999999999998643
No 395
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=80.66 E-value=1.2 Score=41.71 Aligned_cols=31 Identities=35% Similarity=0.522 Sum_probs=27.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
|+|.|| ++|..+|..|+++|++|.+++|...
T Consensus 5 vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~ 37 (242)
T 1uay_A 5 ALVTGGASGLGRAAALALKARGYRVVVLDLRRE 37 (242)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc
Confidence 788994 6899999999999999999998764
No 396
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=80.65 E-value=1.5 Score=42.70 Aligned_cols=30 Identities=27% Similarity=0.336 Sum_probs=26.5
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERN 141 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~ 141 (546)
-|+|.|| |+|..+|..|+++|.+|++++|.
T Consensus 33 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~ 64 (273)
T 3uf0_A 33 TAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT 64 (273)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH
Confidence 3888894 78999999999999999999954
No 397
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=80.65 E-value=1.2 Score=42.77 Aligned_cols=31 Identities=32% Similarity=0.475 Sum_probs=27.3
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 31 ~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 63 (262)
T 3rkr_A 31 VAVVTGASRGIGAAIARKLGSLGARVVLTARDV 63 (262)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEECCH
Confidence 3888894 789999999999999999999864
No 398
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=80.62 E-value=1.6 Score=41.71 Aligned_cols=32 Identities=25% Similarity=0.281 Sum_probs=28.0
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
-|+|.|| |+|..+|..|+++|++|++++|...
T Consensus 9 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~ 42 (250)
T 2fwm_X 9 NVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFT 42 (250)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchh
Confidence 3788894 7899999999999999999998754
No 399
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=80.58 E-value=1.5 Score=41.42 Aligned_cols=30 Identities=37% Similarity=0.465 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| ++|..+|..|+++|++|++++|..
T Consensus 5 vlItGasggiG~~~a~~l~~~G~~V~~~~r~~ 36 (250)
T 2cfc_A 5 AIVTGASSGNGLAIATRFLARGDRVAALDLSA 36 (250)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 689999999999999999999764
No 400
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=80.53 E-value=1.6 Score=41.92 Aligned_cols=31 Identities=35% Similarity=0.492 Sum_probs=27.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
|+|.|| |+|..+|..|+++|++|.+++|...
T Consensus 9 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (256)
T 2d1y_A 9 VLVTGGARGIGRAIAQAFAREGALVALCDLRPE 41 (256)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 788894 7899999999999999999998753
No 401
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=80.51 E-value=1.9 Score=45.86 Aligned_cols=33 Identities=24% Similarity=0.276 Sum_probs=28.9
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
-.|+||||| .|+-+|..|++.|.+|.++|+.+.
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 216 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDH 216 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCc
Confidence 369999976 699999999999999999998864
No 402
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=80.49 E-value=1.5 Score=41.18 Aligned_cols=31 Identities=26% Similarity=0.426 Sum_probs=27.9
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| ++|..+|..|+++|++|.++.|.+
T Consensus 23 ~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 23 RVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred eEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4899994 589999999999999999999875
No 403
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=80.47 E-value=1.1 Score=47.03 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=27.0
Q ss_pred EEEEcc-hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|.|||. -+|+.+|..|+++|++|.++|+.+
T Consensus 3 I~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 3 ISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 789995 579999999999999999999764
No 404
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=80.47 E-value=1.2 Score=42.98 Aligned_cols=30 Identities=43% Similarity=0.598 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 13 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 44 (262)
T 3pk0_A 13 VVVTGGTKGIGRGIATVFARAGANVAVAGRST 44 (262)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999999874
No 405
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=80.47 E-value=1.6 Score=46.05 Aligned_cols=34 Identities=18% Similarity=0.324 Sum_probs=30.0
Q ss_pred cccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 110 TFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 110 ~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
...+.|||.| .|+.+|..||++|++|+++|+.+.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4679999955 799999999999999999998864
No 406
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=80.42 E-value=1.4 Score=42.60 Aligned_cols=30 Identities=17% Similarity=0.346 Sum_probs=26.7
Q ss_pred EEEEc--c--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCG--G--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVG--G--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
++|-| | |+|..+|..||+.|.+|++.+|..
T Consensus 9 alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~ 42 (256)
T 4fs3_A 9 YVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKE 42 (256)
T ss_dssp EEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEECCCCCchHHHHHHHHHHHCCCEEEEEECCH
Confidence 77778 4 799999999999999999999874
No 407
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=80.41 E-value=1.5 Score=42.90 Aligned_cols=31 Identities=32% Similarity=0.529 Sum_probs=27.3
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 18 ~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~ 50 (291)
T 3rd5_A 18 TVVITGANSGLGAVTARELARRGATVIMAVRDT 50 (291)
T ss_dssp EEEEECCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCH
Confidence 3888884 789999999999999999999864
No 408
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=80.41 E-value=1.1 Score=44.16 Aligned_cols=30 Identities=40% Similarity=0.577 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 44 vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 75 (293)
T 3rih_A 44 VLVTGGTKGIGRGIATVFARAGANVAVAARSP 75 (293)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 778884 789999999999999999999875
No 409
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=80.40 E-value=1.6 Score=41.72 Aligned_cols=31 Identities=23% Similarity=0.395 Sum_probs=27.7
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| ++|..+|..|+++|++|++++|..
T Consensus 14 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~ 46 (265)
T 2o23_A 14 VAVITGGASGLGLATAERLVGQGASAVLLDLPN 46 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCc
Confidence 3888994 689999999999999999999875
No 410
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=80.39 E-value=1.7 Score=39.98 Aligned_cols=30 Identities=23% Similarity=0.309 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| ++|..++..|+++|++|.++.|.+
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 3 IGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred EEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 889994 589999999999999999999874
No 411
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=80.36 E-value=0.64 Score=40.57 Aligned_cols=31 Identities=29% Similarity=0.523 Sum_probs=27.3
Q ss_pred cEEEEc-chHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVG-Gg~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|+|+| |++|..+|..|++.|++|.+++|.+
T Consensus 23 ~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 23 KILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp EEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 599999 6689999999999999999999764
No 412
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=80.36 E-value=1.5 Score=42.90 Aligned_cols=32 Identities=28% Similarity=0.325 Sum_probs=28.2
Q ss_pred cEEEEc-chHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 112 DVIIVG-Gg~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
.|.||| |-+|..+|..|+++|++|.+.||.+.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 488999 55899999999999999999998753
No 413
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=80.35 E-value=1.2 Score=43.74 Aligned_cols=30 Identities=30% Similarity=0.445 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 11 vlVTGas~GIG~aia~~la~~G~~V~~~~r~~ 42 (280)
T 3tox_A 11 AIVTGASSGIGRAAALLFAREGAKVVVTARNG 42 (280)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEECCSCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 788884 789999999999999999999874
No 414
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=80.35 E-value=1.6 Score=42.44 Aligned_cols=31 Identities=29% Similarity=0.350 Sum_probs=27.2
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
++|-|| |+|.++|..|++.|.+|++++|...
T Consensus 10 alVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~ 42 (258)
T 4gkb_A 10 VIVTGGASGIGGAISMRLAEERAIPVVFARHAP 42 (258)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred EEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcc
Confidence 677785 7999999999999999999998753
No 415
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=80.30 E-value=1.2 Score=42.20 Aligned_cols=31 Identities=29% Similarity=0.373 Sum_probs=27.3
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 16 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~ 48 (249)
T 3f9i_A 16 TSLITGASSGIGSAIARLLHKLGSKVIISGSNE 48 (249)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4888894 689999999999999999999763
No 416
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=80.27 E-value=1.2 Score=47.25 Aligned_cols=31 Identities=32% Similarity=0.327 Sum_probs=27.9
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|.|||+| +|..+|..|+++|++|.++|+.+
T Consensus 39 kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 39 SVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp EEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999955 79999999999999999999875
No 417
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=80.24 E-value=1.2 Score=43.65 Aligned_cols=30 Identities=27% Similarity=0.420 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 32 vlVTGas~gIG~aia~~la~~G~~V~~~~r~~ 63 (277)
T 3gvc_A 32 AIVTGAGAGIGLAVARRLADEGCHVLCADIDG 63 (277)
T ss_dssp EEETTTTSTHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999999764
No 418
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=80.21 E-value=1.2 Score=43.29 Aligned_cols=30 Identities=30% Similarity=0.328 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 31 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 62 (270)
T 3ftp_A 31 AIVTGASRGIGRAIALELARRGAMVIGTATTE 62 (270)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 777784 789999999999999999999864
No 419
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=80.16 E-value=1.1 Score=43.53 Aligned_cols=30 Identities=30% Similarity=0.445 Sum_probs=26.3
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
++|-|| |+|.++|..|++.|.+|++.+|+.
T Consensus 12 alVTGas~GIG~aia~~la~~Ga~Vvi~~~~~ 43 (255)
T 4g81_D 12 ALVTGSARGLGFAYAEGLAAAGARVILNDIRA 43 (255)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEECCSCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 666684 799999999999999999999864
No 420
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=80.15 E-value=3 Score=41.50 Aligned_cols=30 Identities=17% Similarity=0.244 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|+++++..
T Consensus 49 ~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~ 80 (317)
T 3oec_A 49 AFITGAARGQGRTHAVRLAQDGADIVAIDLCR 80 (317)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCeEEEEeccc
Confidence 778884 799999999999999999999764
No 421
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=80.11 E-value=2.9 Score=44.05 Aligned_cols=33 Identities=21% Similarity=0.189 Sum_probs=27.9
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCC-eEEEEcCCCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGL-RVAIVERNTL 143 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~-rVlLlEr~~~ 143 (546)
-.|+||||| .|+=+|..+.+.|. +|.+++|...
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 369999976 58889999999998 4999998764
No 422
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=80.11 E-value=1.5 Score=42.77 Aligned_cols=30 Identities=20% Similarity=0.398 Sum_probs=26.7
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERN 141 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~ 141 (546)
-|+|.|| |+|..+|..|+++|.+|++++|.
T Consensus 27 ~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~ 58 (281)
T 3v2h_A 27 TAVITGSTSGIGLAIARTLAKAGANIVLNGFG 58 (281)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEECCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3788894 78999999999999999999985
No 423
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=80.11 E-value=1.6 Score=42.29 Aligned_cols=30 Identities=40% Similarity=0.567 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 24 ~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 55 (267)
T 1vl8_A 24 ALVTGGSRGLGFGIAQGLAEAGCSVVVASRNL 55 (267)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 789999999999999999999864
No 424
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=80.06 E-value=1.6 Score=41.02 Aligned_cols=31 Identities=29% Similarity=0.403 Sum_probs=27.3
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| ++|..+|..|+++|++|.+++|..
T Consensus 9 ~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 1cyd_A 9 RALVTGAGKGIGRDTVKALHASGAKVVAVTRTN 41 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3889994 689999999999999999999864
No 425
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=80.04 E-value=1.6 Score=42.07 Aligned_cols=30 Identities=30% Similarity=0.582 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 16 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 47 (267)
T 1iy8_A 16 VLITGGGSGLGRATAVRLAAEGAKLSLVDVSS 47 (267)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888884 789999999999999999999864
No 426
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=80.03 E-value=1.3 Score=43.27 Aligned_cols=30 Identities=37% Similarity=0.460 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 31 ~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 62 (272)
T 4dyv_A 31 AIVTGAGSGVGRAVAVALAGAGYGVALAGRRL 62 (272)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 677784 789999999999999999999864
No 427
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=80.00 E-value=1.6 Score=41.49 Aligned_cols=30 Identities=17% Similarity=0.331 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
++|.|| |+|..+|..|+++|++|.+++|..
T Consensus 8 vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~ 39 (245)
T 1uls_A 8 VLITGAAHGIGRATLELFAKEGARLVACDIEE 39 (245)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 789999999999999999998764
No 428
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=79.98 E-value=1.6 Score=41.88 Aligned_cols=30 Identities=43% Similarity=0.585 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 15 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 46 (263)
T 3ak4_A 15 AIVTGGSKGIGAAIARALDKAGATVAIADLDV 46 (263)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999998864
No 429
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=79.95 E-value=1.6 Score=43.89 Aligned_cols=31 Identities=26% Similarity=0.208 Sum_probs=27.5
Q ss_pred cEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|.|+|+ .+|..+|..|+++|++|.+++|.+
T Consensus 6 ki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 6 TYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 5999995 579999999999999999999764
No 430
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=79.89 E-value=1.6 Score=41.81 Aligned_cols=30 Identities=33% Similarity=0.506 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (260)
T 2z1n_A 10 AVVTAGSSGLGFASALELARNGARLLLFSRNR 41 (260)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 789999999999999999999864
No 431
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=79.87 E-value=1.5 Score=42.30 Aligned_cols=32 Identities=22% Similarity=0.334 Sum_probs=28.1
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
|+|.|| |+|..+|..|+++|++|++++|....
T Consensus 31 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~ 64 (260)
T 3un1_A 31 VVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP 64 (260)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 788884 78999999999999999999987643
No 432
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=79.86 E-value=7.2 Score=41.82 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=28.0
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
.|+|||+| .|.-+|..|++.|.+|.+++|.+.
T Consensus 188 ~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~ 220 (542)
T 1w4x_A 188 RVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPH 220 (542)
T ss_dssp EEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred EEEEECCCccHHHHHHHHhhcCceEEEEEcCCc
Confidence 59999976 599999999999999999998763
No 433
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=79.85 E-value=1.3 Score=46.70 Aligned_cols=31 Identities=26% Similarity=0.405 Sum_probs=27.8
Q ss_pred cEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|.|||. -+|+.+|..|+++|++|.++|+.+
T Consensus 4 kI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 5899995 479999999999999999999774
No 434
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=79.80 E-value=1.3 Score=43.39 Aligned_cols=31 Identities=42% Similarity=0.506 Sum_probs=27.2
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 35 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~ 67 (281)
T 4dry_A 35 IALVTGGGTGVGRGIAQALSAEGYSVVITGRRP 67 (281)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3788884 789999999999999999999874
No 435
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=79.77 E-value=1.7 Score=41.78 Aligned_cols=30 Identities=23% Similarity=0.558 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (263)
T 3ai3_A 10 AVITGSSSGIGLAIAEGFAKEGAHIVLVARQV 41 (263)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCchHHHHHHHHHHHCCCEEEEEcCCH
Confidence 788894 789999999999999999999864
No 436
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=79.74 E-value=1.6 Score=41.57 Aligned_cols=30 Identities=23% Similarity=0.378 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| ++|..+|..|+++|++|++++|..
T Consensus 10 vlITGasggiG~~la~~l~~~G~~V~~~~r~~ 41 (264)
T 2pd6_A 10 ALVTGAGSGIGRAVSVRLAGEGATVAACDLDR 41 (264)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCh
Confidence 888894 689999999999999999998764
No 437
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=79.70 E-value=1.4 Score=47.03 Aligned_cols=31 Identities=35% Similarity=0.465 Sum_probs=27.8
Q ss_pred cEEEEc-chHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVG-Gg~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|+| |++|..+|..|+..|.+|++.|+.+
T Consensus 267 tVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 267 VAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 488999 6789999999999999999999764
No 438
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=79.62 E-value=1.5 Score=42.09 Aligned_cols=33 Identities=33% Similarity=0.379 Sum_probs=29.0
Q ss_pred ccEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 111 FDVIVCGG-TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 111 yDVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
..|.|||. -.|..+|..|+++|++|.+.+|.+.
T Consensus 20 ~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 20 MKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 46999995 5799999999999999999998753
No 439
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=79.60 E-value=1.3 Score=42.79 Aligned_cols=30 Identities=37% Similarity=0.472 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 13 ~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 44 (267)
T 3t4x_A 13 ALVTGSTAGIGKAIATSLVAEGANVLINGRRE 44 (267)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999999874
No 440
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=79.57 E-value=1.7 Score=41.62 Aligned_cols=30 Identities=33% Similarity=0.429 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 8 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 39 (254)
T 1hdc_A 8 VIITGGARGLGAEAARQAVAAGARVVLADVLD 39 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 789999999999999999998764
No 441
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=79.57 E-value=1.3 Score=42.32 Aligned_cols=31 Identities=19% Similarity=0.313 Sum_probs=27.0
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERN 141 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~ 141 (546)
--|+||||| +|...|..|.+.|.+|+|+++.
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 359999976 7999999999999999999864
No 442
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=79.54 E-value=1.7 Score=41.80 Aligned_cols=30 Identities=27% Similarity=0.500 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (262)
T 1zem_A 10 CLVTGAGGNIGLATALRLAEEGTAIALLDMNR 41 (262)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 789999999999999999999764
No 443
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=79.54 E-value=1.8 Score=41.67 Aligned_cols=31 Identities=42% Similarity=0.560 Sum_probs=27.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
|+|.|| |+|..+|..|+++|++|.+++|...
T Consensus 24 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~ 56 (253)
T 2nm0_A 24 VLVTGGNRGIGLAIARAFADAGDKVAITYRSGE 56 (253)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 888894 7899999999999999999998753
No 444
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=79.53 E-value=1.3 Score=42.74 Aligned_cols=30 Identities=27% Similarity=0.495 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 23 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 54 (266)
T 4egf_A 23 ALITGATKGIGADIARAFAAAGARLVLSGRDV 54 (266)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999999864
No 445
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=79.49 E-value=1.5 Score=41.19 Aligned_cols=30 Identities=33% Similarity=0.564 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| ++|..+|..|+++|++|.+++|..
T Consensus 8 vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~ 39 (234)
T 2ehd_A 8 VLITGASRGIGEATARLLHAKGYRVGLMARDE 39 (234)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 888884 689999999999999999998763
No 446
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=79.49 E-value=1.4 Score=42.17 Aligned_cols=30 Identities=27% Similarity=0.461 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 17 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 48 (260)
T 2zat_A 17 ALVTASTDGIGLAIARRLAQDGAHVVVSSRKQ 48 (260)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999999864
No 447
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=79.48 E-value=1.7 Score=41.64 Aligned_cols=30 Identities=33% Similarity=0.447 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 12 vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~ 43 (260)
T 2ae2_A 12 ALVTGGSRGIGYGIVEELASLGASVYTCSRNQ 43 (260)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888884 789999999999999999999864
No 448
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=79.48 E-value=1.7 Score=43.30 Aligned_cols=32 Identities=25% Similarity=0.440 Sum_probs=28.7
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-.|.||| |-+|..+|..|+++|++|.++||.+
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4699999 5579999999999999999999875
No 449
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=79.48 E-value=1.2 Score=42.87 Aligned_cols=31 Identities=26% Similarity=0.374 Sum_probs=27.0
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
=|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 14 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 46 (256)
T 3gaf_A 14 VAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKS 46 (256)
T ss_dssp EEEECSCSSHHHHHHHHHHHHHTCEEEEEESSH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3788884 789999999999999999999864
No 450
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=79.43 E-value=1.7 Score=42.09 Aligned_cols=30 Identities=37% Similarity=0.505 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 24 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~ 55 (273)
T 1ae1_A 24 ALVTGGSKGIGYAIVEELAGLGARVYTCSRNE 55 (273)
T ss_dssp EEEESCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCcchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 789999999999999999999864
No 451
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=79.38 E-value=1.5 Score=42.18 Aligned_cols=30 Identities=30% Similarity=0.444 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 7 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 38 (260)
T 1x1t_A 7 AVVTGSTSGIGLGIATALAAQGADIVLNGFGD 38 (260)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEECCSC
T ss_pred EEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCc
Confidence 788884 789999999999999999999864
No 452
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=79.32 E-value=1.3 Score=46.16 Aligned_cols=32 Identities=19% Similarity=0.382 Sum_probs=28.6
Q ss_pred cEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 112 DVIVCGG-TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
.|||||. -.|..+|..|.+.|++|++||+.+.
T Consensus 6 ~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 6 RVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred eEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 5999995 5899999999999999999998753
No 453
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=79.30 E-value=0.98 Score=44.58 Aligned_cols=32 Identities=19% Similarity=0.352 Sum_probs=27.6
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
--|+||||| +|...|..|.+.|.+|+|++...
T Consensus 14 k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 14 KRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 359999976 79999999999999999999653
No 454
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=79.29 E-value=1.8 Score=40.80 Aligned_cols=31 Identities=35% Similarity=0.449 Sum_probs=27.2
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| ++|..+|..|+++|++|.+++|..
T Consensus 9 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 41 (244)
T 3d3w_A 9 RVLVTGAGKGIGRGTVQALHATGARVVAVSRTQ 41 (244)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3888894 689999999999999999998764
No 455
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=79.29 E-value=1.8 Score=41.74 Aligned_cols=30 Identities=23% Similarity=0.354 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (260)
T 1nff_A 10 ALVSGGARGMGASHVRAMVAEGAKVVFGDILD 41 (260)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999998764
No 456
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=79.28 E-value=1.4 Score=41.94 Aligned_cols=31 Identities=39% Similarity=0.636 Sum_probs=27.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
|+|.|| |+|..+|..|+++|++|.+++|...
T Consensus 18 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 50 (247)
T 1uzm_A 18 VLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSG 50 (247)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSSC
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChH
Confidence 788884 7899999999999999999998753
No 457
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=79.25 E-value=1.8 Score=42.13 Aligned_cols=30 Identities=40% Similarity=0.603 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 32 vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~ 63 (276)
T 2b4q_A 32 ALVTGGSRGIGQMIAQGLLEAGARVFICARDA 63 (276)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 789999999999999999999764
No 458
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=79.23 E-value=1.7 Score=42.05 Aligned_cols=31 Identities=35% Similarity=0.553 Sum_probs=27.3
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|++|++++|.+
T Consensus 11 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 43 (270)
T 1yde_A 11 VVVVTGGGRGIGAGIVRAFVNSGARVVICDKDE 43 (270)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3888894 789999999999999999999864
No 459
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=79.19 E-value=1.7 Score=42.18 Aligned_cols=31 Identities=35% Similarity=0.534 Sum_probs=27.3
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 24 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 56 (277)
T 2rhc_B 24 VALVTGATSGIGLEIARRLGKEGLRVFVCARGE 56 (277)
T ss_dssp EEEEETCSSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3888894 789999999999999999999864
No 460
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=79.19 E-value=1.4 Score=42.59 Aligned_cols=30 Identities=37% Similarity=0.510 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|+++.|..
T Consensus 32 vlITGas~gIG~~la~~l~~~G~~V~~~~r~~ 63 (271)
T 4iin_A 32 VLITGASKGIGAEIAKTLASMGLKVWINYRSN 63 (271)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 888894 789999999999999999999853
No 461
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=79.13 E-value=1.8 Score=41.68 Aligned_cols=30 Identities=40% Similarity=0.589 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 10 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 41 (267)
T 2gdz_A 10 ALVTGAAQGIGRAFAEALLLKGAKVALVDWNL 41 (267)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCcHHHHHHHHHHHCCCEEEEEECCH
Confidence 888894 689999999999999999999764
No 462
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=79.10 E-value=1.6 Score=43.27 Aligned_cols=32 Identities=28% Similarity=0.344 Sum_probs=28.0
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 111 FDVIVCG-GTLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-.|.||| |-+|..+|..|+++|++|.++||.+
T Consensus 8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4699999 5579999999999999999998764
No 463
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=79.04 E-value=1.8 Score=41.64 Aligned_cols=30 Identities=27% Similarity=0.395 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 19 vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 50 (278)
T 2bgk_A 19 AIITGGAGGIGETTAKLFVRYGAKVVIADIAD 50 (278)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEcCCh
Confidence 888894 689999999999999999998763
No 464
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=79.03 E-value=1.8 Score=43.52 Aligned_cols=32 Identities=25% Similarity=0.326 Sum_probs=28.1
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.-|.|+|+| .|.++|..|+++|++|.+++|.+
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 469999955 79999999999999999998763
No 465
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=79.00 E-value=1.6 Score=41.66 Aligned_cols=31 Identities=32% Similarity=0.615 Sum_probs=27.4
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| ++|..+|..|+++|++|++++|..
T Consensus 16 ~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~ 48 (265)
T 1h5q_A 16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSA 48 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTEEEEEEESSC
T ss_pred EEEEECCCchHHHHHHHHHHHCCCeEEEEeCcc
Confidence 3889994 689999999999999999999864
No 466
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=78.88 E-value=1.5 Score=42.52 Aligned_cols=30 Identities=33% Similarity=0.461 Sum_probs=26.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
++|-|| |+|.++|..||+.|.+|++.+|..
T Consensus 12 alVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~ 43 (247)
T 4hp8_A 12 ALVTGANTGLGQAIAVGLAAAGAEVVCAARRA 43 (247)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCc
Confidence 566684 799999999999999999999864
No 467
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=78.85 E-value=1.6 Score=41.57 Aligned_cols=30 Identities=23% Similarity=0.348 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 9 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 40 (246)
T 2ag5_A 9 IILTAAAQGIGQAAALAFAREGAKVIATDINE 40 (246)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 788884 789999999999999999999864
No 468
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=78.82 E-value=1.8 Score=42.76 Aligned_cols=31 Identities=26% Similarity=0.553 Sum_probs=27.5
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 33 ~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~ 65 (301)
T 3tjr_A 33 AAVVTGGASGIGLATATEFARRGARLVLSDVDQ 65 (301)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3888994 789999999999999999999864
No 469
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=78.82 E-value=1.9 Score=41.31 Aligned_cols=30 Identities=37% Similarity=0.491 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (256)
T 1geg_A 5 ALVTGAGQGIGKAIALRLVKDGFAVAIADYND 36 (256)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788894 789999999999999999998764
No 470
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=78.75 E-value=1.7 Score=41.61 Aligned_cols=30 Identities=23% Similarity=0.364 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 7 vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~ 38 (255)
T 2q2v_A 7 ALVTGSTSGIGLGIAQVLARAGANIVLNGFGD 38 (255)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 788884 789999999999999999999865
No 471
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=78.68 E-value=1.8 Score=43.07 Aligned_cols=30 Identities=30% Similarity=0.440 Sum_probs=26.5
Q ss_pred cEEEEcc-hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG-TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG-g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
.|.|+|+ ..|++.|..|+ +|.+|.+++|.+
T Consensus 4 kI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 4 KIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp EEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 5899995 47999999999 999999999864
No 472
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=78.67 E-value=1.9 Score=41.68 Aligned_cols=30 Identities=20% Similarity=0.393 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 9 vlITGas~gIG~aia~~l~~~G~~V~~~~r~~ 40 (263)
T 2a4k_A 9 ILVTGAASGIGRAALDLFAREGASLVAVDREE 40 (263)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999999864
No 473
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=78.65 E-value=1.6 Score=41.92 Aligned_cols=30 Identities=33% Similarity=0.371 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 8 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 39 (260)
T 2qq5_A 8 CVVTGASRGIGRGIALQLCKAGATVYITGRHL 39 (260)
T ss_dssp EEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 778884 789999999999999999998763
No 474
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=78.61 E-value=1.4 Score=42.97 Aligned_cols=30 Identities=30% Similarity=0.476 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 29 ~lVTGas~gIG~aia~~la~~G~~V~~~~r~~ 60 (271)
T 4ibo_A 29 ALVTGSSRGLGRAMAEGLAVAGARILINGTDP 60 (271)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEECCSCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999998764
No 475
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=78.59 E-value=1.9 Score=41.11 Aligned_cols=30 Identities=23% Similarity=0.401 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCe-EEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLR-VAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~r-VlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++ |++++|..
T Consensus 8 vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~ 40 (254)
T 1sby_A 8 VIFVAALGGIGLDTSRELVKRNLKNFVILDRVE 40 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHHTCCSEEEEEESSC
T ss_pred EEEECCCChHHHHHHHHHHHCCCcEEEEEecCc
Confidence 888894 6899999999999997 99998864
No 476
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=78.56 E-value=1.5 Score=43.74 Aligned_cols=30 Identities=33% Similarity=0.440 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|+++++..
T Consensus 30 vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~ 61 (322)
T 3qlj_A 30 VIVTGAGGGIGRAHALAFAAEGARVVVNDIGV 61 (322)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEECCCB
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCcc
Confidence 788884 789999999999999999999873
No 477
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=78.53 E-value=1.6 Score=42.35 Aligned_cols=31 Identities=23% Similarity=0.338 Sum_probs=27.0
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|.+|.+++|..
T Consensus 29 ~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~ 61 (266)
T 3grp_A 29 KALVTGATGGIGEAIARCFHAQGAIVGLHGTRE 61 (266)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3788884 789999999999999999998763
No 478
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=78.51 E-value=1.9 Score=41.86 Aligned_cols=30 Identities=37% Similarity=0.553 Sum_probs=26.4
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|+++++..
T Consensus 34 ~lVTGas~GIG~aia~~la~~G~~V~~~~~~~ 65 (271)
T 3v2g_A 34 AFVTGGSRGIGAAIAKRLALEGAAVALTYVNA 65 (271)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 888894 789999999999999999997653
No 479
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=78.38 E-value=1.9 Score=41.73 Aligned_cols=31 Identities=32% Similarity=0.444 Sum_probs=27.1
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| ++|..+|..|+++|++|++++|..
T Consensus 34 ~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~ 66 (279)
T 1xg5_A 34 LALVTGASGGIGAAVARALVQQGLKVVGCARTV 66 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCh
Confidence 3888884 689999999999999999998763
No 480
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=78.33 E-value=1.6 Score=41.31 Aligned_cols=30 Identities=30% Similarity=0.405 Sum_probs=26.8
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|.+|++++|..
T Consensus 8 vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~ 39 (247)
T 3lyl_A 8 ALVTGASRGIGFEVAHALASKGATVVGTATSQ 39 (247)
T ss_dssp EEESSCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 789999999999999999999864
No 481
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=78.33 E-value=2 Score=43.66 Aligned_cols=33 Identities=21% Similarity=0.349 Sum_probs=29.0
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNTLK 144 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~~ 144 (546)
-|+|.|| |+|..+|..|+++|.+|++++|....
T Consensus 47 ~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~ 81 (346)
T 3kvo_A 47 TVFITGASRGIGKAIALKAAKDGANIVIAAKTAQP 81 (346)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSC
T ss_pred EEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhh
Confidence 3888894 79999999999999999999988654
No 482
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=78.29 E-value=1.5 Score=42.02 Aligned_cols=29 Identities=28% Similarity=0.480 Sum_probs=26.2
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERN 141 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~ 141 (546)
|+|.|| |+|..+|..|+++|.+|++++|.
T Consensus 12 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~ 42 (257)
T 3tl3_A 12 AVVTGGASGLGLATTKRLLDAGAQVVVLDIR 42 (257)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTCEEEEEESS
T ss_pred EEEeCCCCHHHHHHHHHHHHCCCEEEEEeCc
Confidence 788894 78999999999999999999984
No 483
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=78.28 E-value=1.9 Score=41.62 Aligned_cols=31 Identities=16% Similarity=0.253 Sum_probs=27.3
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| ++|..+|..|+++|++|++++|..
T Consensus 33 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~ 65 (272)
T 1yb1_A 33 IVLITGAGHGIGRLTAYEFAKLKSKLVLWDINK 65 (272)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEEcCH
Confidence 3888994 689999999999999999999764
No 484
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=78.20 E-value=1.8 Score=42.60 Aligned_cols=30 Identities=33% Similarity=0.362 Sum_probs=26.7
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERN 141 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~ 141 (546)
-|+|.|| |+|..+|..|+++|.+|+++++.
T Consensus 51 ~vlVTGas~GIG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 51 KALVTGGDSGIGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCG
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3888894 78999999999999999999876
No 485
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=78.17 E-value=1.9 Score=42.09 Aligned_cols=31 Identities=32% Similarity=0.411 Sum_probs=27.3
Q ss_pred cEEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|+|.|| |+|..+|..|+++|++|++++|..
T Consensus 28 ~vlITGasggiG~~la~~L~~~G~~V~~~~r~~ 60 (302)
T 1w6u_A 28 VAFITGGGTGLGKGMTTLLSSLGAQCVIASRKM 60 (302)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3888894 689999999999999999999864
No 486
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=78.10 E-value=1.9 Score=42.15 Aligned_cols=30 Identities=37% Similarity=0.457 Sum_probs=27.0
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| ++|..+|..|+++|++|++++|..
T Consensus 21 vlVTGasggIG~~la~~l~~~G~~V~~~~r~~ 52 (303)
T 1yxm_A 21 AIVTGGATGIGKAIVKELLELGSNVVIASRKL 52 (303)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEECCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 888894 689999999999999999999864
No 487
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=77.98 E-value=1.5 Score=41.46 Aligned_cols=30 Identities=27% Similarity=0.429 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| ++|..+|..|+++|++|.+++|..
T Consensus 14 vlVtGasggiG~~la~~l~~~G~~V~~~~r~~ 45 (255)
T 1fmc_A 14 AIITGAGAGIGKEIAITFATAGASVVVSDINA 45 (255)
T ss_dssp EEETTTTSHHHHHHHHHHHTTTCEEEEEESCH
T ss_pred EEEECCccHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 788884 689999999999999999999864
No 488
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=77.98 E-value=5.1 Score=44.31 Aligned_cols=37 Identities=41% Similarity=0.462 Sum_probs=33.4
Q ss_pred CcccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCCCC
Q 009027 109 GTFDVIVCGGT-LGIFIATALSFKGLRVAIVERNTLKG 145 (546)
Q Consensus 109 ~~yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~~~ 145 (546)
.+|||+|||.| .|+.+|+.|++.|.+|++|||+...+
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~g 44 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYG 44 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCccc
Confidence 37999999976 59999999999999999999998765
No 489
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=77.96 E-value=2.1 Score=41.82 Aligned_cols=29 Identities=41% Similarity=0.605 Sum_probs=26.1
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERN 141 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~ 141 (546)
|+|.|| |+|..+|..|+++|.+|+++++.
T Consensus 32 ~lVTGas~GIG~aia~~la~~G~~V~~~~~~ 62 (280)
T 4da9_A 32 AIVTGGRRGIGLGIARALAASGFDIAITGIG 62 (280)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC
T ss_pred EEEecCCCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 788894 78999999999999999999864
No 490
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=77.89 E-value=1.7 Score=41.55 Aligned_cols=30 Identities=30% Similarity=0.480 Sum_probs=26.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 9 vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~ 40 (253)
T 1hxh_A 9 ALVTGGASGVGLEVVKLLLGEGAKVAFSDINE 40 (253)
T ss_dssp EEETTTTSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 788884 689999999999999999998764
No 491
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=77.77 E-value=1.6 Score=44.49 Aligned_cols=33 Identities=18% Similarity=0.579 Sum_probs=28.6
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCC-eEEEEcCCCC
Q 009027 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (546)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LA~~G~-rVlLlEr~~~ 143 (546)
.-|+||| ||+|+.+|..|++.|+ ++.|+|....
T Consensus 119 ~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 119 AKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 4699999 7899999999999998 7889997653
No 492
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=77.61 E-value=2.3 Score=44.88 Aligned_cols=33 Identities=21% Similarity=0.512 Sum_probs=28.8
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
-.|+||||| .|+-+|..|++.|.+|.++++.+.
T Consensus 192 ~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~ 225 (484)
T 3o0h_A 192 KSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDL 225 (484)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCc
Confidence 369999975 699999999999999999998764
No 493
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=77.60 E-value=1.1 Score=41.87 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=27.6
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNTL 143 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~~ 143 (546)
++|.|| |+|..+|..|+++|.+|.+++|...
T Consensus 9 vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~ 41 (223)
T 3uce_A 9 YVVLGGTSGIGAELAKQLESEHTIVHVASRQTG 41 (223)
T ss_dssp EEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc
Confidence 788894 7899999999999999999998754
No 494
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=77.55 E-value=1.6 Score=43.40 Aligned_cols=28 Identities=25% Similarity=0.301 Sum_probs=25.7
Q ss_pred EEEEcch-HHHHHHHHHHhCCCeEEEEcC
Q 009027 113 VIVCGGT-LGIFIATALSFKGLRVAIVER 140 (546)
Q Consensus 113 VIIVGGg-~G~~~Aa~LA~~G~rVlLlEr 140 (546)
|.|+|+| +|..+|..|+++|++|.+++|
T Consensus 3 I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 3 VSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 7899954 799999999999999999997
No 495
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=77.54 E-value=2.1 Score=42.81 Aligned_cols=30 Identities=20% Similarity=0.424 Sum_probs=26.3
Q ss_pred ccEEEEcch-HHHHHHHHHHhCCCeEEEEcCC
Q 009027 111 FDVIVCGGT-LGIFIATALSFKGLRVAIVERN 141 (546)
Q Consensus 111 yDVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~ 141 (546)
..|.|+|+| .|.+.|..|+++|++|.++ +.
T Consensus 20 ~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~ 50 (318)
T 3hwr_A 20 MKVAIMGAGAVGCYYGGMLARAGHEVILI-AR 50 (318)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CC
T ss_pred CcEEEECcCHHHHHHHHHHHHCCCeEEEE-Ec
Confidence 359999955 7999999999999999999 55
No 496
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=77.51 E-value=1.7 Score=41.22 Aligned_cols=29 Identities=24% Similarity=0.484 Sum_probs=26.5
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERN 141 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~ 141 (546)
|+|.|| ++|..+|..|+++|++|.+++|.
T Consensus 10 vlVTGasggiG~~~a~~l~~~G~~V~~~~r~ 40 (258)
T 3afn_B 10 VLITGSSQGIGLATARLFARAGAKVGLHGRK 40 (258)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred EEEeCCCChHHHHHHHHHHHCCCEEEEECCC
Confidence 788884 68999999999999999999987
No 497
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=77.50 E-value=1.7 Score=46.41 Aligned_cols=31 Identities=26% Similarity=0.326 Sum_probs=27.8
Q ss_pred cEEEEcch-HHHHHHHHHHhCCCeEEEEcCCC
Q 009027 112 DVIVCGGT-LGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 112 DVIIVGGg-~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
-|.|||+| +|..+|..|+++|++|.++|+.+
T Consensus 7 kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 7 TVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred EEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 58999955 79999999999999999999875
No 498
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=77.41 E-value=1.8 Score=44.09 Aligned_cols=33 Identities=24% Similarity=0.459 Sum_probs=28.9
Q ss_pred ccEEEEc-chHHHHHHHHHHhCCC-eEEEEcCCCC
Q 009027 111 FDVIVCG-GTLGIFIATALSFKGL-RVAIVERNTL 143 (546)
Q Consensus 111 yDVIIVG-Gg~G~~~Aa~LA~~G~-rVlLlEr~~~ 143 (546)
..|+||| ||+|+.+|..|++.|+ ++.|+|....
T Consensus 37 ~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 37 SRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 4699999 7899999999999999 7889996653
No 499
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=77.37 E-value=1.5 Score=42.00 Aligned_cols=30 Identities=27% Similarity=0.489 Sum_probs=26.7
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| |+|..+|..|+++|++|.+++|..
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~ 36 (258)
T 3a28_C 5 AMVTGGAQGIGRGISEKLAADGFDIAVADLPQ 36 (258)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTCEEEEEECGG
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 788894 789999999999999999998764
No 500
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=77.34 E-value=2.3 Score=39.32 Aligned_cols=30 Identities=27% Similarity=0.337 Sum_probs=26.9
Q ss_pred EEEEcc--hHHHHHHHHHHhCCCeEEEEcCCC
Q 009027 113 VIVCGG--TLGIFIATALSFKGLRVAIVERNT 142 (546)
Q Consensus 113 VIIVGG--g~G~~~Aa~LA~~G~rVlLlEr~~ 142 (546)
|+|.|| ++|..++..|+++|++|.++.|.+
T Consensus 3 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 3 IAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 889995 589999999999999999999864
Done!