BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 009029
(546 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9NS00|C1GLT_HUMAN Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Homo sapiens GN=C1GALT1 PE=1 SV=1
Length = 363
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 217 LPNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTYFSHSMAFGGGGI 276
L + WF+ ADDDT DNL +LSKYDP E +Y G + + Y S GG G
Sbjct: 159 LEDADWFLKADDDTYVILDNLRWLLSKYDPEEPIYFGRRFKPYVKQGYMS-----GGAGY 213
Query: 277 AISYPLAEALSNIHDDCIDRYPKLYGSDDRLH-ACITELGIPLTVEPGFHQWDIRGNAHG 335
+S EAL R+ + +D H + I +L + +E + G++
Sbjct: 214 VLS---KEALK--------RFVDAFKTDKCTHSSSIEDLALGRCMEIMNVE---AGDSRD 259
Query: 336 LLSSHPIAPFVSIHHV 351
+ PFV HH+
Sbjct: 260 TIGKETFHPFVPEHHL 275
>sp|Q8BHT6|B3GLT_MOUSE Beta-1,3-glucosyltransferase OS=Mus musculus GN=B3galtl PE=2 SV=3
Length = 489
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 219 NVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTYFSHSMAFGGGGIAI 278
+ W V+ DDDT+ + L +LS YD ++ V++G +S GGGG+
Sbjct: 332 KISWLVIVDDDTLISISRLRHLLSCYDSSDPVFLG--ERYGYGLGTGGYSYVTGGGGMVF 389
Query: 279 SYPLAEALSNIHDDCIDRYPKLYGSDDRLHACITELGIPLTVEPGFHQ 326
S EA+ + Y D L C + LG+P+T P FHQ
Sbjct: 390 S---REAIRRLLVSSCRCYSNDAPDDMVLGMCFSGLGVPVTHSPLFHQ 434
>sp|Q6Y288|B3GLT_HUMAN Beta-1,3-glucosyltransferase OS=Homo sapiens GN=B3GALTL PE=1 SV=2
Length = 498
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 47/105 (44%), Gaps = 5/105 (4%)
Query: 222 WFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTYFSHSMAFGGGGIAISYP 281
W V+ DDDT+ + L +LS YD E V++G +S GGGG+ S
Sbjct: 344 WLVIVDDDTLISISRLQHLLSCYDSGEPVFLG--ERYGYGLGTGGYSYITGGGGMVFS-- 399
Query: 282 LAEALSNIHDDCIDRYPKLYGSDDRLHACITELGIPLTVEPGFHQ 326
EA+ + Y D L C + LGIP+T P FHQ
Sbjct: 400 -REAVRRLLASKCRCYSNDAPDDMVLGMCFSGLGIPVTHSPLFHQ 443
>sp|O12972|RFNG_CHICK Beta-1,3-N-acetylglucosaminyltransferase radical fringe OS=Gallus
gallus GN=RFNG PE=2 SV=2
Length = 372
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 78/197 (39%), Gaps = 32/197 (16%)
Query: 108 PSPNRSLSLS---EEKQEELSLKHIVFGIAGSSHLWKRRKEFVRLWWLPNLMRGHVWLED 164
P P+R + + +E L LK I + + K R E + W+ RG ++
Sbjct: 82 PWPSRRVRMGPPGGSAKESLELKDIFIAVKTTRKYHKTRLELLFQTWISR-ARGQTFIFT 140
Query: 165 NYK---LQKGQGDDSLQLPPIMVSEDISRFRYTNPTGHPSGLRISRIVIECFRLGLPNVR 221
+++ L+ GD M++ + S H ++ +E + +
Sbjct: 141 DWEDRELRLKAGDH-------MINTNCSAV-------HTRQALCCKMSVEYDKFLESGQK 186
Query: 222 WFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPS-----------ESHSANTYFSHSMA 270
WF DDD N L+ +LS + P++ VY+G PS +S + T A
Sbjct: 187 WFCHVDDDNYVNPRTLLRLLSAFSPSQDVYVGRPSLDHPIEAADHVQSDGSKTSVKFWFA 246
Query: 271 FGGGGIAISYPLAEALS 287
GG G IS LA +S
Sbjct: 247 TGGAGFCISRGLALKMS 263
>sp|Q0VC84|C1GLT_BOVIN Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Bos taurus GN=C1GALT1 PE=2 SV=1
Length = 368
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 217 LPNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTYFSHSMAFGGGGI 276
L + WF+ ADDDT DNL +LSKY+P E +Y G + + Y S GG G
Sbjct: 159 LEDADWFMKADDDTYVILDNLRWLLSKYNPEEPIYFGRRFKPYVKQGYMS-----GGAGY 213
Query: 277 AISYPLAEALSNIHDDCIDRYPKLYGSDDRLH-ACITELGIPLTVEPGFHQWDIRGNAHG 335
+S EAL R+ + + +D H + I +L + +E + G++
Sbjct: 214 VLS---KEALK--------RFVEAFKTDKCTHSSSIEDLALGRCMEIINVE---AGDSRD 259
Query: 336 LLSSHPIAPFVSIHHV 351
PFV HH+
Sbjct: 260 TTGKETFHPFVPEHHL 275
>sp|Q08BL3|C1GTA_DANRE Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-A
OS=Danio rerio GN=c1galt1a PE=2 SV=1
Length = 408
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 59/152 (38%), Gaps = 32/152 (21%)
Query: 209 VIECFRLGLPN----VRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTY 264
I F L N WF+ ADDDT DNL +LS Y P + +Y G + ++ Y
Sbjct: 152 TIRAFHYALKNHGHEADWFLKADDDTFVVVDNLRWILSNYTPEQPIYFGKRFKPYTKQGY 211
Query: 265 FSHSMAFGGGGIAISYPLAEALSNIHDD-----CIDRYPKLYGSDDRLHACITELGIPLT 319
S GG G +S EAL + C P D + C+ ++G+
Sbjct: 212 MS-----GGAGYVLS---KEALRRFVEGFSTKVCTHTTPV---EDLAMGQCLEKMGV--- 257
Query: 320 VEPGFHQWDIRGNAHGLLSSHPIAPFVSIHHV 351
+ G++ L PF+ HH+
Sbjct: 258 ---------LAGDSRDSLHRETFHPFIPEHHL 280
>sp|Q66H69|B3GN7_RAT UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
OS=Rattus norvegicus GN=B3gnt7 PE=2 SV=1
Length = 397
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 54/130 (41%), Gaps = 26/130 (20%)
Query: 218 PNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIG-----------------TPSESHS 260
PNV + DDD N NL+ LS P E +++G P+ +S
Sbjct: 227 PNVPFIFKGDDDVFVNPTNLLEFLSDRQPQENLFVGDVLKHARPIRKKDNKYYIPAVMYS 286
Query: 261 ANTYFSHSMAFGGGGIAISYPLAEALSNIHDDCIDRYPKLYGSDDR-LHACITELGIPLT 319
TY ++ GGGG +S LA L + D +L+ DD L C+ LG+ T
Sbjct: 287 KATYPPYA---GGGGFLMSGSLARQLHHACDTL-----ELFPIDDVFLGMCLEVLGVKPT 338
Query: 320 VEPGFHQWDI 329
GF + I
Sbjct: 339 GHEGFKTFGI 348
>sp|Q9JJ06|C1GLT_MOUSE Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Mus musculus GN=C1galt1 PE=1 SV=1
Length = 363
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 217 LPNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTYFSHSMAFGGGGI 276
L + WF+ ADDDT DNL +LSKY+P + +Y G + + Y S GG G
Sbjct: 159 LEDADWFMKADDDTYVIVDNLRWLLSKYNPEQPIYFGRRFKPYVKQGYMS-----GGAGY 213
Query: 277 AIS 279
+S
Sbjct: 214 VLS 216
>sp|Q8NFL0|B3GN7_HUMAN UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
OS=Homo sapiens GN=B3GNT7 PE=2 SV=1
Length = 401
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 57/139 (41%), Gaps = 20/139 (14%)
Query: 218 PNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSE-----SHSANTYF------- 265
P+V + DDD N NL+ L+ P E +++G + N Y+
Sbjct: 231 PHVPFIFKGDDDVFVNPTNLLEFLADRQPQENLFVGDVLQHARPIRRKDNKYYIPGALYG 290
Query: 266 --SHSMAFGGGGIAISYPLAEALSNIHDDCIDRYPKLYGSDDR-LHACITELGIPLTVEP 322
S+ GGGG ++ LA L + D +LY DD L C+ LG+ T
Sbjct: 291 KASYPPYAGGGGFLMAGSLARRLHHACDTL-----ELYPIDDVFLGMCLEVLGVQPTAHE 345
Query: 323 GFHQWDIRGNAHGLLSSHP 341
GF + I N + ++ P
Sbjct: 346 GFKTFGISRNRNSRMNKEP 364
>sp|Q9JJ05|C1GLT_RAT Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Rattus norvegicus GN=C1galt1 PE=1 SV=1
Length = 363
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 217 LPNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTYFSHSMAFGGGGI 276
L + WF+ ADDDT DNL +LSKY+P + +Y G + + Y S GG G
Sbjct: 159 LEDADWFMKADDDTYVILDNLRWLLSKYNPEQPIYFGRRFKPYVKQGYMS-----GGAGY 213
Query: 277 AIS 279
+S
Sbjct: 214 VLS 216
>sp|P79948|LFNG_XENLA Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Xenopus
laevis GN=lfng PE=2 SV=1
Length = 375
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 73/179 (40%), Gaps = 27/179 (15%)
Query: 121 QEELSLKHIVFGIAGSSHLWKRRKEFVRLWWLP-NLMRGHVWLE-DNYKLQKGQGDDSLQ 178
+E+++ + + + + R + + W+ N + ++ + ++ +LQK G+
Sbjct: 103 EEDITANDVFIAVKTTKKFHRSRMDLLMDTWISRNKEQTFIFTDGEDEELQKKTGN---- 158
Query: 179 LPPIMVSEDISRFRYTNPTGHPSGLRISRIVIECFRLGLPNVRWFVLADDDTIFNSDNLV 238
++S + S H ++ +E + + +WF DDD N LV
Sbjct: 159 ----VISTNCS-------AAHSRQALSCKMAVEYDKFIESDKKWFCHVDDDNYVNVRTLV 207
Query: 239 AVLSKYDPTEMVYIGTPSESH--SANTYFSHS--------MAFGGGGIAISYPLAEALS 287
+LS+Y T +YIG PS A S S A GG G IS LA +S
Sbjct: 208 KLLSRYSHTNDIYIGKPSLDRPIQATERISESNMRPVNFWFATGGAGFCISRGLALKMS 266
>sp|Q8K0J2|B3GN7_MOUSE UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
OS=Mus musculus GN=B3gnt7 PE=2 SV=2
Length = 397
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 53/130 (40%), Gaps = 26/130 (20%)
Query: 218 PNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIG-----------------TPSESHS 260
PNV + DDD N NL+ LS P E +++G P+ +
Sbjct: 227 PNVPFVFKGDDDVFVNPTNLLEFLSDRQPQENLFVGDVLKHARPIRKKDNKYYIPAVMYG 286
Query: 261 ANTYFSHSMAFGGGGIAISYPLAEALSNIHDDCIDRYPKLYGSDDR-LHACITELGIPLT 319
TY ++ GGGG +S LA L + D +L+ DD L C+ LG+ T
Sbjct: 287 KATYPPYA---GGGGFLMSGSLARQLHHACDTL-----ELFPIDDVFLGMCLEVLGVKPT 338
Query: 320 VEPGFHQWDI 329
GF + I
Sbjct: 339 GHEGFKTFGI 348
>sp|Q24342|FNG_DROME Fringe glycosyltransferase OS=Drosophila melanogaster GN=fng PE=1
SV=1
Length = 412
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 50/120 (41%), Gaps = 15/120 (12%)
Query: 221 RWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSES-------HSANTYFSHSMAF-- 271
+WF DDD N LV +L +Y P+ Y+G PS S S NT + + F
Sbjct: 230 KWFCHFDDDNYVNVPRLVKLLDEYSPSVDWYLGKPSISSPLEIHLDSKNTTTNKKITFWF 289
Query: 272 --GGGGIAISYPLAEALSNIH--DDCIDRYPKLYGSDDRLHACITE--LGIPLTVEPGFH 325
GG G +S L + I I K+ DD I E L +PLTV FH
Sbjct: 290 ATGGAGFCLSRALTLKMLPIAGGGKFISIGDKIRFPDDVTMGFIIEHLLKVPLTVVDNFH 349
>sp|Q8JHF2|LFNG_DANRE Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Danio
rerio GN=lfng PE=2 SV=2
Length = 374
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 87/223 (39%), Gaps = 36/223 (16%)
Query: 122 EELSLKHIVFGIAGSSHLWKRRKEFVRLWWLPNLMRGHVWLEDNYKLQKGQGDDSLQLPP 181
E++S I + + + R + + W+ MR D G+D +L
Sbjct: 102 EDISADDIFIAVKTTKKFHRSRLDLLLDTWISRNMRQTYIFTD--------GEDE-ELKK 152
Query: 182 IMVSEDISRFRYTNPTGHPSGLRIS-RIVIECFRLGLPNVRWFVLADDDTIFNSDNLVAV 240
+ S I+ TN + S +S ++ +E + +WF DDD N+ LV +
Sbjct: 153 KIGSHAIN----TNCSAAHSRQALSCKMAVEYDKFIESGKKWFCHVDDDNYVNTKTLVKL 208
Query: 241 LSKYDPTEMVYIGTPS--------------ESHSANTYFSHSMAFGGGGIAISYPLAEAL 286
LS Y T+ +YIG PS + N +F A GG G IS LA +
Sbjct: 209 LSNYPHTQDMYIGKPSLDRPIEATERLGDNKMRPVNFWF----ATGGAGFCISRGLALKM 264
Query: 287 S--NIHDDCIDRYPKLYGSDDRLHACITE--LGIPLTVEPGFH 325
S ++ K+ DD I E LG+ LT FH
Sbjct: 265 SPWASGGHFMNTAEKIRLPDDCTIGYIIESVLGVSLTRSSLFH 307
>sp|Q5F3G7|C1GLT_CHICK Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Gallus gallus GN=C1GALT1 PE=2 SV=1
Length = 366
Score = 41.6 bits (96), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Query: 219 NVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTYFSHSMAFGGGGIAI 278
+ WF+ ADDDT DNL +LSKY P + +Y G + + Y S GG G +
Sbjct: 162 DADWFMKADDDTYVILDNLRWLLSKYSPEQPIYFGRRFKPYVKQGYMS-----GGAGYVL 216
Query: 279 S 279
S
Sbjct: 217 S 217
>sp|O12971|LFNG_CHICK Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Gallus
gallus GN=LFNG PE=2 SV=1
Length = 363
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 34/77 (44%), Gaps = 10/77 (12%)
Query: 221 RWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESH--SANTYFSHS--------MA 270
+WF DDD N LV +LS Y T+ +YIG PS A S + A
Sbjct: 178 KWFCHVDDDNYVNVRTLVKLLSSYPHTQDIYIGKPSLDRPIQATERISENKMHPVHFWFA 237
Query: 271 FGGGGIAISYPLAEALS 287
GG G IS LA +S
Sbjct: 238 TGGAGFCISRGLALKMS 254
>sp|Q7SYI5|C1GTB_DANRE Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B
OS=Danio rerio GN=c1galt1b PE=2 SV=1
Length = 374
Score = 39.3 bits (90), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 222 WFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTYFSHSMAFGGGGIAIS 279
WF+ ADDDT DNL +L+++ P + VY G + + Y S GG G +S
Sbjct: 164 WFLKADDDTYVIVDNLRWILARHSPEDPVYFGRRFKPYVKQGYMS-----GGAGYVLS 216
>sp|Q2KJ92|LFNG_BOVIN Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Bos
taurus GN=LFNG PE=2 SV=1
Length = 380
Score = 38.1 bits (87), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 207 RIVIECFRLGLPNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESH--SANTY 264
++ +E R +WF DDD N L+ +L Y T+ VY+G PS A
Sbjct: 181 KMAVEYDRFIESGRKWFCHVDDDNYVNVRALLRLLGSYPHTQDVYLGKPSLDRPIQATER 240
Query: 265 FSHS--------MAFGGGGIAISYPLAEALS 287
S + A GG G IS LA +S
Sbjct: 241 VSENKVRPVHFWFATGGAGFCISRGLALKMS 271
>sp|O00587|MFNG_HUMAN Beta-1,3-N-acetylglucosaminyltransferase manic fringe OS=Homo
sapiens GN=MFNG PE=1 SV=2
Length = 321
Score = 38.1 bits (87), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 37/104 (35%), Gaps = 25/104 (24%)
Query: 219 NVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPS----------ESHSANTYFSHS 268
+RWF DDD N L+ +L + VY+G PS + H+
Sbjct: 134 GLRWFCHVDDDNYVNPRALLQLLRAFPLARDVYVGRPSLNRPIHASEPQPHNRTRLVQFW 193
Query: 269 MAFGGGGIAISYPLA---------------EALSNIHDDCIDRY 297
A GG G I+ LA AL + DDC Y
Sbjct: 194 FATGGAGFCINRKLALKMAPWASGSRFMDTSALIRLPDDCTMGY 237
>sp|Q9R1U9|RFNG_RAT Beta-1,3-N-acetylglucosaminyltransferase radical fringe OS=Rattus
norvegicus GN=Rfng PE=2 SV=1
Length = 334
Score = 37.7 bits (86), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 13/79 (16%)
Query: 221 RWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESH------------SANTYFSHS 268
+WF DDD N +L+ +LS + + +Y+G PS H ++NT
Sbjct: 143 KWFCHVDDDNYVNPKSLLHLLSTFSSNQDIYLGRPSLDHPIEATERVQGGGTSNT-VKFW 201
Query: 269 MAFGGGGIAISYPLAEALS 287
A GG G +S LA +S
Sbjct: 202 FATGGAGFCLSRGLALKMS 220
>sp|O09009|RFNG_MOUSE Beta-1,3-N-acetylglucosaminyltransferase radical fringe OS=Mus
musculus GN=Rfng PE=2 SV=1
Length = 332
Score = 37.7 bits (86), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 13/79 (16%)
Query: 221 RWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESH------------SANTYFSHS 268
+WF DDD N +L+ +LS + + +Y+G PS H ++NT
Sbjct: 141 KWFCHVDDDNYVNPKSLLHLLSTFSSNQDIYLGRPSLDHPIEATERVQGGGTSNT-VKFW 199
Query: 269 MAFGGGGIAISYPLAEALS 287
A GG G +S LA +S
Sbjct: 200 FATGGAGFCLSRGLALKMS 218
>sp|Q5IS64|MFNG_PANTR Beta-1,3-N-acetylglucosaminyltransferase manic fringe OS=Pan
troglodytes GN=MFNG PE=2 SV=1
Length = 321
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 37/104 (35%), Gaps = 25/104 (24%)
Query: 219 NVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPS----------ESHSANTYFSHS 268
+RWF DDD N L+ +L + VY+G PS + H+
Sbjct: 134 GLRWFCHVDDDNYVNPRALLQLLRAFPLAHDVYVGRPSLNRPIHASEPQPHNRTRLVQFW 193
Query: 269 MAFGGGGIAISYPLA---------------EALSNIHDDCIDRY 297
A GG G I+ LA AL + DDC Y
Sbjct: 194 FATGGAGFCINRRLALKMAPWASGSRFMDTSALIRLPDDCTMGY 237
>sp|Q6GNL1|C1GLT_XENLA Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Xenopus laevis GN=c1galt1 PE=2 SV=1
Length = 360
Score = 37.4 bits (85), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Query: 217 LPNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTYFSHSMAFGGGGI 276
L WF ADDDT DNL +LS Y + +Y G + + Y S GG G
Sbjct: 147 LNETEWFFKADDDTYVIMDNLRWMLSNYTADQPIYFGKRFKPYIKQGYMS-----GGAGY 201
Query: 277 AIS 279
+S
Sbjct: 202 VLS 204
>sp|O09008|MFNG_MOUSE Beta-1,3-N-acetylglucosaminyltransferase manic fringe OS=Mus
musculus GN=Mfng PE=1 SV=1
Length = 321
Score = 37.0 bits (84), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 37/104 (35%), Gaps = 25/104 (24%)
Query: 219 NVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPS----------ESHSANTYFSHS 268
+RWF DDD N L+ +L + VY+G PS +S +
Sbjct: 134 GLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHASELQSKNRTKLVRFW 193
Query: 269 MAFGGGGIAISYPLA---------------EALSNIHDDCIDRY 297
A GG G I+ LA AL + DDC Y
Sbjct: 194 FATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGY 237
>sp|Q9C0J1|B3GN4_HUMAN UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4
OS=Homo sapiens GN=B3GNT4 PE=2 SV=1
Length = 378
Score = 36.6 bits (83), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 20/128 (15%)
Query: 218 PNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIG------TPSESHSANTYFSHSM-- 269
P + + DDD + N++ L +DP + + +G P+ + + SM
Sbjct: 209 PQAHFMLKGDDDVFVHVPNVLEFLDGWDPAQDLLVGDVIRQALPNRNTKVKYFIPPSMYR 268
Query: 270 ------AFGGGGIAISYPLAEALSNIHDDCIDRYPKLYGSDDR-LHACITELGIPLTVEP 322
GGGG +S L I +D +L+ DD + C+ LG+
Sbjct: 269 ATHYPPYAGGGGYVMSRATVRRLQAIMEDA-----ELFPIDDVFVGMCLRRLGLSPMHHA 323
Query: 323 GFHQWDIR 330
GF + IR
Sbjct: 324 GFKTFGIR 331
>sp|Q18515|C1GLT_CAEEL Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Caenorhabditis elegans GN=C38H2.2 PE=2 SV=2
Length = 389
Score = 36.2 bits (82), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 55/144 (38%), Gaps = 21/144 (14%)
Query: 217 LPNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTYFSHSMAFGGGGI 276
L + WF+ ADDDT +NL +L + P E ++ G + + Y S GG G
Sbjct: 176 LNDYDWFLKADDDTYVVMENLRFMLLAHSPDEPIHFGCKFKPFTQGGYHS-----GGAGY 230
Query: 277 AISYPLAEALSNIH--DDCIDRYPKLYGSDDRLHACITELGIPLTVEPGFHQWDIRGNAH 334
+S + + D + D + C+ ++G+ G++
Sbjct: 231 VLSREALKKFIEVALPDKSLCSQNHGGAEDAEMGKCLEKVGVKA------------GDSR 278
Query: 335 GLLSSHPIAPFVSIHHVEA--VDP 356
H PFV HH+ VDP
Sbjct: 279 DADGHHRFMPFVPEHHLSPGHVDP 302
>sp|P79949|RFNG_XENLA Beta-1,3-N-acetylglucosaminyltransferase radical fringe OS=Xenopus
laevis GN=rfng PE=2 SV=1
Length = 340
Score = 35.8 bits (81), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 10/91 (10%)
Query: 207 RIVIECFRLGLPNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTY-- 264
++ +E + L + +WF DDD N L+ +LS + + VY+G PS H T
Sbjct: 162 KMAVEYDKFVLSDKKWFCHLDDDNYLNLHALLDLLSTFSHSTDVYVGRPSLDHPVETVDR 221
Query: 265 ----FSHSMAF----GGGGIAISYPLAEALS 287
S S+ F GG G IS LA +S
Sbjct: 222 MKGDGSGSLKFWFATGGAGFCISRGLALKMS 252
>sp|Q9YHB3|RFNG_NOTVI Beta-1,3-N-acetylglucosaminyltransferase radical fringe
OS=Notophthalmus viridescens GN=RFNG PE=2 SV=1
Length = 396
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 36/79 (45%), Gaps = 14/79 (17%)
Query: 221 RWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESH------------SANTYFSHS 268
+WF DDD N +L +L+ + ++ VY+G PS H SA+ F
Sbjct: 211 KWFCHVDDDNYVNLFSLRHLLASFSHSQDVYLGRPSLDHPIEAIERVKSDGSASVRF--W 268
Query: 269 MAFGGGGIAISYPLAEALS 287
A GG G IS LA +S
Sbjct: 269 FATGGAGFCISRGLALKMS 287
>sp|Q7K237|C1GLT_DROME Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
OS=Drosophila melanogaster GN=C1GalTA PE=2 SV=1
Length = 388
Score = 35.8 bits (81), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 9/89 (10%)
Query: 217 LPNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTYFSHSMAFGGGGI 276
+ + WF+ ADDDT +N+ +L Y P VY G + + Y S +
Sbjct: 171 INDADWFLKADDDTYTIVENMRYMLYPYSPETPVYFGCKFKPYVKQGYMSGGAGYVLSRE 230
Query: 277 AISYPLAEALSNIHDDCIDRYPKLYGSDD 305
A+ + EAL N PKL SD+
Sbjct: 231 AVRRFVVEALPN---------PKLCKSDN 250
>sp|A7IAL9|DTDA_METB6 D-tyrosyl-tRNA(Tyr) deacylase OS=Methanoregula boonei (strain 6A8)
GN=dtdA PE=3 SV=2
Length = 436
Score = 35.4 bits (80), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
Query: 294 IDRYPKLYGSDDRLHACITELGIPLTVEP-----GFHQWDIRGNAHGLLSSHPIAPFVSI 348
IDR L G R+ A + ELGIP E G W+ L ++ I
Sbjct: 228 IDRKAVLPGDVSRISAILDELGIPRLSETEITSLGHLAWEAYREVRALAATVGPQTRCFI 287
Query: 349 HHVEAVDPFYPGLTSLDSLKLFTKAMRADPRSFLQR 384
H +E P L SLD + L ++A R D + +QR
Sbjct: 288 HALEGTGPLV--LVSLDPV-LLSEAKRCDESALVQR 320
>sp|P45895|CHSS2_CAEEL Chondroitin sulfate synthase 2 OS=Caenorhabditis elegans GN=mig-22
PE=2 SV=1
Length = 804
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 47/110 (42%), Gaps = 13/110 (11%)
Query: 219 NVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSANTYFSHSMAFGGGGIAI 278
N WF+LA D T N L+ ++ + E V +G +E S G+ +
Sbjct: 178 NYDWFLLAKDSTYINPFVLLRMIDTMNWNEPVVMGEAAEDGSGRCRLD-------TGMLL 230
Query: 279 SYPLAEALSNIHDDCIDRYPKLYGSDDRL--HACITELGIPLTVEPGFHQ 326
S P AL N + C + L DD+L CI ++ LT +P HQ
Sbjct: 231 SQPAMHALMNNRNACNNF--ALAADDDQLAFEKCI-QIATNLTCKP-LHQ 276
>sp|Q8NES3|LFNG_HUMAN Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Homo
sapiens GN=LFNG PE=1 SV=2
Length = 379
Score = 33.5 bits (75), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 207 RIVIECFRLGLPNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPS--------ES 258
++ +E R +WF DDD N L+ +L+ Y T VY+G PS E
Sbjct: 180 KMAVEYDRFIESGRKWFCHVDDDNYVNLRALLRLLASYPHTRDVYVGKPSLDRPIQAMER 239
Query: 259 HSANTY--FSHSMAFGGGGIAISYPLAEALS--NIHDDCIDRYPKLYGSDDRLHACITE- 313
S N A GG G IS LA +S ++ ++ DD I E
Sbjct: 240 VSENKVRPVHFWFATGGAGFCISRGLALKMSPWASGGHFMNTAERIRLPDDCTIGYIVEA 299
Query: 314 -LGIPLTVEPGFH 325
LG+PL FH
Sbjct: 300 LLGVPLIRSGLFH 312
>sp|O09010|LFNG_MOUSE Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Mus
musculus GN=Lfng PE=1 SV=1
Length = 378
Score = 33.5 bits (75), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 207 RIVIECFRLGLPNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSES---HSANT 263
++ +E R +WF DDD N L+ +L+ Y T+ VYIG PS +
Sbjct: 179 KMAVEYDRFIESGKKWFCHVDDDNYVNLRALLRLLASYPHTQDVYIGKPSLDRPIQATER 238
Query: 264 YFSHSM-------AFGGGGIAISYPLA 283
H + A GG G IS LA
Sbjct: 239 ISEHKVRPVHFWFATGGAGFCISRGLA 265
>sp|Q924T4|LFNG_RAT Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe OS=Rattus
norvegicus GN=Lfng PE=2 SV=1
Length = 378
Score = 33.1 bits (74), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 207 RIVIECFRLGLPNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSES---HSANT 263
++ +E R +WF DDD N L+ +L+ Y T+ VYIG PS +
Sbjct: 179 KMAVEYDRFIESGKKWFCHVDDDNYVNLRALLRLLASYPHTQDVYIGKPSLDRPIQATER 238
Query: 264 YFSHSM-------AFGGGGIAISYPLA 283
H + A GG G IS LA
Sbjct: 239 ISEHRVRPVHFWFATGGAGFCISRGLA 265
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.137 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 219,347,571
Number of Sequences: 539616
Number of extensions: 9648379
Number of successful extensions: 42775
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 42128
Number of HSP's gapped (non-prelim): 524
length of query: 546
length of database: 191,569,459
effective HSP length: 122
effective length of query: 424
effective length of database: 125,736,307
effective search space: 53312194168
effective search space used: 53312194168
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)