Query 009029
Match_columns 546
No_of_seqs 333 out of 985
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 17:13:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009029.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009029hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2j0a_A Beta-1,3-N-acetylglucos 100.0 3.4E-32 1.2E-36 276.2 12.5 209 123-351 9-238 (280)
2 1qg8_A Protein (spore coat pol 71.0 5.1 0.00017 37.5 5.5 98 218-315 87-201 (255)
3 4fix_A UDP-galactofuranosyl tr 63.1 5.6 0.00019 44.4 4.6 98 219-322 268-410 (657)
4 3bcv_A Putative glycosyltransf 61.9 7.6 0.00026 35.8 4.6 98 219-320 84-216 (240)
5 2c0n_A A197; thermophil protei 55.3 11 0.00038 36.1 4.4 109 217-328 51-175 (203)
6 1xhb_A Polypeptide N-acetylgal 54.6 6.1 0.00021 41.3 2.8 46 271-321 204-250 (472)
7 4hg6_A Cellulose synthase subu 54.2 14 0.00049 41.9 6.1 96 218-321 237-360 (802)
8 2z86_A Chondroitin synthase; G 53.3 9.7 0.00033 41.2 4.3 99 219-322 174-323 (625)
9 2ffu_A Ppgalnact-2, polypeptid 48.4 13 0.00044 39.3 4.2 47 271-322 236-283 (501)
10 2d7i_A Polypeptide N-acetylgal 45.9 9 0.00031 41.6 2.5 46 271-321 284-330 (570)
11 2z86_A Chondroitin synthase; G 27.5 38 0.0013 36.5 3.8 91 219-315 454-559 (625)
12 2p6w_A VP54, putative glycosyl 24.9 57 0.0019 31.2 3.9 47 207-254 61-110 (213)
13 2bo4_A Mannosylglycerate synth 20.7 1.4E+02 0.0049 30.9 6.4 102 218-322 91-210 (397)
No 1
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=99.97 E-value=3.4e-32 Score=276.15 Aligned_cols=209 Identities=20% Similarity=0.260 Sum_probs=145.7
Q ss_pred CCCCCcEEEEEecCcccHHHHHHHHHHhhhccCC-cEEEEecCCccccCCCCCCCCCCCce----eecCCccccccCCCC
Q 009029 123 ELSLKHIVFGIAGSSHLWKRRKEFVRLWWLPNLM-RGHVWLEDNYKLQKGQGDDSLQLPPI----MVSEDISRFRYTNPT 197 (546)
Q Consensus 123 ~~~~~~Ivf~I~Ts~~~~~tR~~~ik~tW~~~~~-r~~vFsD~~~~v~~~~~~~~~~LP~v----~is~dts~f~Y~~~~ 197 (546)
++++++|+|+|+|++++|.+|+++|++||++.+. +++||+|.+++ . +|.+ .+..+.+. .|
T Consensus 9 ~~~~~~I~~~V~T~~~~~~~R~~~I~~TW~~~~~~~~fifsd~~d~--------~--l~~~~~~~~~~~~~~~-~~---- 73 (280)
T 2j0a_A 9 ELQLGDIFIAVKTTWAFHRSRLDLLLDTWVSRIRQQTFIFTDSPDE--------R--LQERLGPHLVVTQCSA-EH---- 73 (280)
T ss_dssp CCCGGGEEEEEECCGGGTTTTHHHHHHTGGGGSGGGEEEEESSCCH--------H--HHHHHGGGEEECCC---------
T ss_pred CCCcccEEEEEECcHHHHHHHHHHHHHHHhccCCCceEEEcCCCcc--------c--ccccccccceeccccc-cc----
Confidence 6778999999999999999999999999998764 57889997632 1 2221 12223221 11
Q ss_pred CCCCCchhhHHHHHHHHhcCCCccEEEEEcCCccccHHHHHHHHhcCCCCCCeEEeccCCCCCCC----------ccccc
Q 009029 198 GHPSGLRISRIVIECFRLGLPNVRWFVLADDDTIFNSDNLVAVLSKYDPTEMVYIGTPSESHSAN----------TYFSH 267 (546)
Q Consensus 198 G~~~a~ri~rmv~e~~~~~~p~~kWfv~~DDDTy~~~~nL~~~LskyD~~ep~YIG~~se~~~~~----------~~~g~ 267 (546)
.++++.+ +|..++.++..+++|||+++||||||+++||+++|++||+++++|||..++..... ...++
T Consensus 74 -~~~~l~~-K~~~~~~~~l~~~~~Wf~~~DDDtyv~~~nL~~~L~~~d~~~~~YiG~~~~~~~~~~~~~~~~~~~~~~~~ 151 (280)
T 2j0a_A 74 -SHPALSC-KMAAEFDAFLVSGLRWFCHVDDDNYVNPKALLQLLKTFPQDRDVYVGKPSLNRPIHASELQSKQRTKLVRF 151 (280)
T ss_dssp ----CCCH-HHHHHHHHHHHHTCSEEEEEETTEEECHHHHHHHHTTSCTTSCCEEECEEC-------------------C
T ss_pred -cccchHH-HHHHHHHHHhCCCCcEEEEeCCCcEEcHHHHHHHHHhCCCCCCEEEEEeccCccccccccCcccccccccc
Confidence 1233322 33333322234799999999999999999999999999999999999998764321 11246
Q ss_pred cccccCcccccCHHHHHHHHhhhccccc--cC-CCCCCchHHHHHHHH-HcCCCceecCCCCCCCCC-CCCC-CccCCCC
Q 009029 268 SMAFGGGGIAISYPLAEALSNIHDDCID--RY-PKLYGSDDRLHACIT-ELGIPLTVEPGFHQWDIR-GNAH-GLLSSHP 341 (546)
Q Consensus 268 ~fa~GGaG~vLSr~LlkkL~~~~d~C~~--~~-~~~~~~D~~Lg~Cl~-~lGV~LT~~pgfhq~d~~-gd~~-g~~es~~ 341 (546)
+||+|||||+||++|+++|.+..+.|.- .. .....+|..||+||+ ++||+++++++|||+... ++.. ..+..
T Consensus 152 ~y~~GGaG~vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~~Fh~~~~~~~~~~~~~l~~-- 229 (280)
T 2j0a_A 152 WFATGGAGFCINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSPLFHSHLETLQLLGAAQLPE-- 229 (280)
T ss_dssp CEECGGGCEEEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECTTCCCSSSCGGGCCTTTGGG--
T ss_pred CcccCCCEEEECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecccccCCCchhccCCHHHhcc--
Confidence 7999999999999999999987766621 00 112346889999998 799999999999998652 2222 22222
Q ss_pred CCCceecccC
Q 009029 342 IAPFVSIHHV 351 (546)
Q Consensus 342 ~~PlvSlHH~ 351 (546)
+..+|+|.+
T Consensus 230 -~~~~s~~~~ 238 (280)
T 2j0a_A 230 -QVTLSYGVF 238 (280)
T ss_dssp -CSEEECEEE
T ss_pred -Ccceecccc
Confidence 345899944
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=71.04 E-value=5.1 Score=37.52 Aligned_cols=98 Identities=15% Similarity=0.240 Sum_probs=54.7
Q ss_pred CCccEEEEEcCCccccHHHHHHHHhcCC--CCCCeEEeccCC---CCCCC-----------ccccccccccCcccccCHH
Q 009029 218 PNVRWFVLADDDTIFNSDNLVAVLSKYD--PTEMVYIGTPSE---SHSAN-----------TYFSHSMAFGGGGIAISYP 281 (546)
Q Consensus 218 p~~kWfv~~DDDTy~~~~nL~~~LskyD--~~ep~YIG~~se---~~~~~-----------~~~g~~fa~GGaG~vLSr~ 281 (546)
-+.+|++++|+|.++..+.|.++++.+. ++-.+..|.... +.... ..........|+++++.+.
T Consensus 87 a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~ 166 (255)
T 1qg8_A 87 AEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVTWNAPCAIDHCSVMHRYS 166 (255)
T ss_dssp CCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCCSCBSCCTTTSCGGGEEEETH
T ss_pred cCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCchHHHHHhhcCCCccceEEEEHH
Confidence 3679999999999999776666665442 344444443321 11000 0001123456889999999
Q ss_pred HHHHHHhhhccccc-cCCCCCCchHHHHHHHHHcC
Q 009029 282 LAEALSNIHDDCID-RYPKLYGSDDRLHACITELG 315 (546)
Q Consensus 282 LlkkL~~~~d~C~~-~~~~~~~~D~~Lg~Cl~~lG 315 (546)
+++++...+..... ......++|..+..-+...|
T Consensus 167 ~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g 201 (255)
T 1qg8_A 167 VLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY 201 (255)
T ss_dssp HHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC
T ss_pred HHHhhcccccccccCCcccchHHHHHHHHHHHHhC
Confidence 99998633310000 00012467887766665545
No 3
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=63.10 E-value=5.6 Score=44.37 Aligned_cols=98 Identities=18% Similarity=0.162 Sum_probs=59.1
Q ss_pred CccEEEEEcCCccccHHHHHHHHhcCCCC-CCeEEeccCCCC-CC---------------------Cc----cc------
Q 009029 219 NVRWFVLADDDTIFNSDNLVAVLSKYDPT-EMVYIGTPSESH-SA---------------------NT----YF------ 265 (546)
Q Consensus 219 ~~kWfv~~DDDTy~~~~nL~~~LskyD~~-ep~YIG~~se~~-~~---------------------~~----~~------ 265 (546)
+.+|++++|||+.+..+.|.++++.++.. +...+|...... .. .. .+
T Consensus 268 ~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~f~~~~l~ 347 (657)
T 4fix_A 268 DCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAPHAEYDHDFAEYPLN 347 (657)
T ss_dssp CCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECTTCCSCEETTTSCSS
T ss_pred CCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccccccccccccccccc
Confidence 78999999999999987777766554322 234455311100 00 00 00
Q ss_pred ----------c--ccccccCcccccCHHHHHHHHhhhccccccCCCCCCchHHHHHHHHHcCCCceecC
Q 009029 266 ----------S--HSMAFGGGGIAISYPLAEALSNIHDDCIDRYPKLYGSDDRLHACITELGIPLTVEP 322 (546)
Q Consensus 266 ----------g--~~fa~GGaG~vLSr~LlkkL~~~~d~C~~~~~~~~~~D~~Lg~Cl~~lGV~LT~~p 322 (546)
. .....+|+++++.+.+++++-. ++. + ..+.+|..++.=+.+.|.++...|
T Consensus 348 ~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGg-fd~----~-F~~~ED~Dl~lR~~~~G~ki~~~p 410 (657)
T 4fix_A 348 DNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQ-PLP----L-FIKWDDADYGLRAAEHGYPTVTLP 410 (657)
T ss_dssp CSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCS-CCS----C-SSSSHHHHHHHHHHHTTCCEEEEE
T ss_pred cccccccccccceeccccchhHhHhhHHHHHHhCC-Chh----H-hccCcHHHHHHHHHHcCCeEEEEC
Confidence 0 0113578889999999998753 221 1 235688888877778887654433
No 4
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=61.86 E-value=7.6 Score=35.83 Aligned_cols=98 Identities=11% Similarity=0.019 Sum_probs=52.2
Q ss_pred CccEEEEEcCCccccHHHHHHHHhcCCC-CCCeEEeccCC-CCCC------------Ccccc----------c-------
Q 009029 219 NVRWFVLADDDTIFNSDNLVAVLSKYDP-TEMVYIGTPSE-SHSA------------NTYFS----------H------- 267 (546)
Q Consensus 219 ~~kWfv~~DDDTy~~~~nL~~~LskyD~-~ep~YIG~~se-~~~~------------~~~~g----------~------- 267 (546)
..+|++++|+|.++..+.|.++++.+.. ...+.+|.... .... ...+. +
T Consensus 84 ~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (240)
T 3bcv_A 84 TGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNKNEIHTLLKDLIASDPYA 163 (240)
T ss_dssp CSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC--------------------CEEECSHHHHHHHHGGGTSSCHHH
T ss_pred CCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCHHHHHHHHHHHhhcchhh
Confidence 5699999999999997666666554432 33444443211 0000 00000 0
Q ss_pred ----cccccCcccccCHHHHHHHHhhhccccccCCCCCCchHHHHHHHHHcCCCcee
Q 009029 268 ----SMAFGGGGIAISYPLAEALSNIHDDCIDRYPKLYGSDDRLHACITELGIPLTV 320 (546)
Q Consensus 268 ----~fa~GGaG~vLSr~LlkkL~~~~d~C~~~~~~~~~~D~~Lg~Cl~~lGV~LT~ 320 (546)
.+...|++.++.+.+++++.-.+++- + ...++|..+..=+...|.++..
T Consensus 164 ~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~---~-~~~~eD~~~~~r~~~~g~~i~~ 216 (240)
T 3bcv_A 164 REERAIQVSAKVVLYRRNLIEKKHLRFVSE---R-ILPSEDLIFNVDVLANSNIVCV 216 (240)
T ss_dssp HHHHHHHHTCSCEEEEHHHHHHTTCCCCCT---T-TCTTHHHHHHHHHHTTCSCEEE
T ss_pred ccccccccchhheeeeHHHHHHcCCccCCC---C-CccCCCHHHHHHHHHhCCEEEE
Confidence 01123678899999998864123221 1 1245787776666566655443
No 5
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=55.30 E-value=11 Score=36.14 Aligned_cols=109 Identities=15% Similarity=0.100 Sum_probs=63.5
Q ss_pred CCCccEEEEEcCC---ccccHHHHHHHHhcCCCCCCeEEeccCCCCC----------CCccccccccccCcccc-cCHHH
Q 009029 217 LPNVRWFVLADDD---TIFNSDNLVAVLSKYDPTEMVYIGTPSESHS----------ANTYFSHSMAFGGGGIA-ISYPL 282 (546)
Q Consensus 217 ~p~~kWfv~~DDD---Ty~~~~nL~~~LskyD~~ep~YIG~~se~~~----------~~~~~g~~fa~GGaG~v-LSr~L 282 (546)
..++++++++|.| .-|.++.+.++|.. ..++..|...-... .....+.....+|+||. ++|+.
T Consensus 51 ~~~~dhllfIDAD~~~I~FdPe~V~rLl~~---g~DVV~GsYp~K~~~~~s~~a~~y~~~i~~~~V~d~~tGF~lIkR~V 127 (203)
T 2c0n_A 51 MKDYDTLAFLDEDVVPIEIDFQKVEAKFNE---GYDVVCGYYYLKTLRGYSVYRKDWEKEIFDGEVNGCGLGFTFIKREF 127 (203)
T ss_dssp CTTCCEEEEECTTEEEEECCHHHHHHHHHH---TCSEEEEECBCTTSSSBSEESSSBCSSCCCEECSEECSSEEEEEHHH
T ss_pred cCCCCEEEEEeCCCCccccCHHHHHHHHhC---CCCEEEEEeeccCCCccchHHHHHHHhccCceeeeccccEEEEhHHH
Confidence 5789999999999 99999999999954 67788887643210 00111224556777875 89999
Q ss_pred HHHHHhh-hcc-ccccCCCCCCchHHHHHHHHHcCCCceecCCCCCCC
Q 009029 283 AEALSNI-HDD-CIDRYPKLYGSDDRLHACITELGIPLTVEPGFHQWD 328 (546)
Q Consensus 283 lkkL~~~-~d~-C~~~~~~~~~~D~~Lg~Cl~~lGV~LT~~pgfhq~d 328 (546)
+++|.+- +-. -.++....+|+|..+-.=++..|-.+.....||-.|
T Consensus 128 ~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~~~~~~~~~~~ 175 (203)
T 2c0n_A 128 LEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYALSSLKAYHFID 175 (203)
T ss_dssp HTTSCSSCCCC---------CCHHHHHHHHHCCCEEEEEEEEEEEESS
T ss_pred HHHHhhhhhhcCChhhhccccCCceEEEeccccccccccccccceeec
Confidence 9888542 200 001111234566554333333454454444455544
No 6
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=54.59 E-value=6.1 Score=41.33 Aligned_cols=46 Identities=17% Similarity=0.270 Sum_probs=30.4
Q ss_pred ccCcccccCHHHHHHHHhhhccccccCCCCC-CchHHHHHHHHHcCCCceec
Q 009029 271 FGGGGIAISYPLAEALSNIHDDCIDRYPKLY-GSDDRLHACITELGIPLTVE 321 (546)
Q Consensus 271 ~GGaG~vLSr~LlkkL~~~~d~C~~~~~~~~-~~D~~Lg~Cl~~lGV~LT~~ 321 (546)
..|+.+++++.+++++-. +++- + ..| ++|..|..=+.+.|.++...
T Consensus 204 ~~g~~~~irr~~~~~iGg-fde~---~-~~~g~ED~dl~~R~~~~G~~i~~~ 250 (472)
T 1xhb_A 204 MAGGLFSIDRDYFQEIGT-YDAG---M-DIWGGENLEISFRIWQCGGTLEIV 250 (472)
T ss_dssp CCSSSEEEEHHHHHHTTS-CCTT---S-CTTCCCCSHHHHHHHHTTCEEEEE
T ss_pred ccceeEEEEHHHHHHcCC-CCCc---c-cccCchhHHHHHHHHhcCCeEEEc
Confidence 456778899999998754 3332 1 234 57878877777778665443
No 7
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=54.15 E-value=14 Score=41.88 Aligned_cols=96 Identities=13% Similarity=0.108 Sum_probs=61.6
Q ss_pred CCccEEEEEcCCccccHHHHHHHHhcC--CCCCCeEEeccCCCCCC-------------C--c-c----------ccccc
Q 009029 218 PNVRWFVLADDDTIFNSDNLVAVLSKY--DPTEMVYIGTPSESHSA-------------N--T-Y----------FSHSM 269 (546)
Q Consensus 218 p~~kWfv~~DDDTy~~~~nL~~~Lsky--D~~ep~YIG~~se~~~~-------------~--~-~----------~g~~f 269 (546)
-+.+|++++|+|+.+..+.|.++++.+ |++-....|........ . . . ++..
T Consensus 237 a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 315 (802)
T 4hg6_A 237 LKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDRCPPENEMFYGKIHRGLDRWGGA- 315 (802)
T ss_dssp CCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTTSCCTTHHHHHTHHHHHHHTTCC-
T ss_pred cCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhhhhHHHHHHHHHHHhhHhhcCCc-
Confidence 367999999999999988888887776 55544444432211100 0 0 0 1112
Q ss_pred cccCcccccCHHHHHHHHhhhccccccCCCCCCchHHHHHHHHHcCCCceec
Q 009029 270 AFGGGGIAISYPLAEALSNIHDDCIDRYPKLYGSDDRLHACITELGIPLTVE 321 (546)
Q Consensus 270 a~GGaG~vLSr~LlkkL~~~~d~C~~~~~~~~~~D~~Lg~Cl~~lGV~LT~~ 321 (546)
...|++.++.+.+++++....+ ...++|..++.-+.+.|.+....
T Consensus 316 ~~~G~~~~~Rr~al~~vGgf~~-------~~~~ED~~l~~rl~~~G~ri~~~ 360 (802)
T 4hg6_A 316 FFCGSAAVLRRRALDEAGGFAG-------ETITEDAETALEIHSRGWKSLYI 360 (802)
T ss_dssp CCCSSSEEEEHHHHHHHTTCCC-------SSSSHHHHHHHHHHTTTCCEEEC
T ss_pred eecccchhhhHHHHHHcCCcCC-------CCcchHHHHHHHHHHcCCeEEEe
Confidence 3467889999999998753221 13468889988888887665433
No 8
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=53.30 E-value=9.7 Score=41.25 Aligned_cols=99 Identities=13% Similarity=0.155 Sum_probs=58.7
Q ss_pred CccEEEEEcCCccccHHHHHHHHhcCCC-CCCeEEeccCCCCCCC----------------------------------c
Q 009029 219 NVRWFVLADDDTIFNSDNLVAVLSKYDP-TEMVYIGTPSESHSAN----------------------------------T 263 (546)
Q Consensus 219 ~~kWfv~~DDDTy~~~~nL~~~LskyD~-~ep~YIG~~se~~~~~----------------------------------~ 263 (546)
..+|++++|+|+.+..+-|.++++.+.. .....+|......... .
T Consensus 174 ~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (625)
T 2z86_A 174 KYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGKVEQNKSV 253 (625)
T ss_dssp CSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC---------------CC
T ss_pred CcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhhhccCCcc
Confidence 6899999999999997777776665532 2334444431100000 0
Q ss_pred cc--------------cc-cccccCcccccCHHHHHHHHhhhccccccCCCCC-CchHHHHHHHHHcCCCceecC
Q 009029 264 YF--------------SH-SMAFGGGGIAISYPLAEALSNIHDDCIDRYPKLY-GSDDRLHACITELGIPLTVEP 322 (546)
Q Consensus 264 ~~--------------g~-~fa~GGaG~vLSr~LlkkL~~~~d~C~~~~~~~~-~~D~~Lg~Cl~~lGV~LT~~p 322 (546)
.| .. .....|+++++++.+++++.. ++.- + ..| ++|..++.=+.+.|..+...|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGg-fde~---~-~~~g~ED~dl~~Rl~~~G~~i~~~p 323 (625)
T 2z86_A 254 DWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGW-FDEE---F-THWGGEDNEFGYRLYREGCYFRSVE 323 (625)
T ss_dssp CTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCC-CCTT---C-SSCCCHHHHHHHHHHHTTCEEEECG
T ss_pred ccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCC-Cccc---c-ccCCcchhhhhhhHHhCCceEEEcc
Confidence 00 00 012578889999999998753 3322 1 233 478788777777886655443
No 9
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=48.40 E-value=13 Score=39.27 Aligned_cols=47 Identities=19% Similarity=0.268 Sum_probs=31.2
Q ss_pred ccCcccccCHHHHHHHHhhhccccccCCCCC-CchHHHHHHHHHcCCCceecC
Q 009029 271 FGGGGIAISYPLAEALSNIHDDCIDRYPKLY-GSDDRLHACITELGIPLTVEP 322 (546)
Q Consensus 271 ~GGaG~vLSr~LlkkL~~~~d~C~~~~~~~~-~~D~~Lg~Cl~~lGV~LT~~p 322 (546)
..|+.+++++.+++++-. +++- + ..+ ++|..|..=+.+.|..+...|
T Consensus 236 ~~g~~~~irr~~~~~iGg-fde~---~-~~~g~ED~dl~~Rl~~~G~~i~~~p 283 (501)
T 2ffu_A 236 IAGGLFVMDKFYFEELGK-YDMM---M-DVWGGENLEISFRVWQCGGSLEIIP 283 (501)
T ss_dssp CCSSSEEEEHHHHHHTTC-CCTT---C-CSSSSHHHHHHHHHHHTTCEEEEEE
T ss_pred ccceEEEEEHHHHHHhCC-CCcc---c-cccCcchHHHHHHHHhcCCeEEEcc
Confidence 457789999999998863 3322 1 234 578788777777776655433
No 10
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=45.86 E-value=9 Score=41.60 Aligned_cols=46 Identities=15% Similarity=0.133 Sum_probs=31.7
Q ss_pred ccCcccccCHHHHHHHHhhhccccccCCCCC-CchHHHHHHHHHcCCCceec
Q 009029 271 FGGGGIAISYPLAEALSNIHDDCIDRYPKLY-GSDDRLHACITELGIPLTVE 321 (546)
Q Consensus 271 ~GGaG~vLSr~LlkkL~~~~d~C~~~~~~~~-~~D~~Lg~Cl~~lGV~LT~~ 321 (546)
..|+.+++++.+++++-. +|+- + ..| ++|..|..=+.+.|..+...
T Consensus 284 ~~g~~~~irr~~~~~iGg-fDe~---~-~~~g~ED~dl~~Rl~~~G~~i~~~ 330 (570)
T 2d7i_A 284 MAGGLFAVDRKWFWELGG-YDPG---L-EIWGGEQYEISFKVWMCGGRMEDI 330 (570)
T ss_dssp CCSSSEEEEHHHHHHTTS-SCTT---C-CSSSSHHHHHHHHHHHTTCEEEEE
T ss_pred ccceEEEEEHHHHHhcCC-CCCc---c-cccCcchHHHHHHHHhCCCeEEEc
Confidence 347789999999999854 3332 2 234 57888888787888766543
No 11
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=27.52 E-value=38 Score=36.49 Aligned_cols=91 Identities=13% Similarity=0.092 Sum_probs=49.3
Q ss_pred CccEEEEEcCCccccHHHHHHHHhcC--CCCCCeEEeccC-CCCCCCc--------ccc----ccccccCcccccCHHHH
Q 009029 219 NVRWFVLADDDTIFNSDNLVAVLSKY--DPTEMVYIGTPS-ESHSANT--------YFS----HSMAFGGGGIAISYPLA 283 (546)
Q Consensus 219 ~~kWfv~~DDDTy~~~~nL~~~Lsky--D~~ep~YIG~~s-e~~~~~~--------~~g----~~fa~GGaG~vLSr~Ll 283 (546)
..+|++++|+|.++.++.|.++++.+ ++.-....|... .+..... .+. ......|++.++.+.++
T Consensus 454 ~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 533 (625)
T 2z86_A 454 RGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWPIYSREKLTSAMICHHFRMFTARAW 533 (625)
T ss_dssp CSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCCCSSCCHHHHTTSCCCCSCEEEEHHHH
T ss_pred CCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcccccCCHHHHhhcccCCceEEEEHHHH
Confidence 57999999999999987777776654 333333333211 0100000 000 01123456778888877
Q ss_pred HHHHhhhccccccCCCCCCchHHHHHHHHHcC
Q 009029 284 EALSNIHDDCIDRYPKLYGSDDRLHACITELG 315 (546)
Q Consensus 284 kkL~~~~d~C~~~~~~~~~~D~~Lg~Cl~~lG 315 (546)
+++.. +++ .+ .+++|..+..-+.+.|
T Consensus 534 ~~~gg-fd~---~~--~~~eD~dl~~r~~~~g 559 (625)
T 2z86_A 534 NLTEG-FNE---SI--SNAVDYDMYLKLSEVG 559 (625)
T ss_dssp TTTTC-CCS---SC--SSCHHHHHHHHHTTTS
T ss_pred HHhCC-CCC---cc--CChHHHHHHHHHHHhC
Confidence 65432 221 11 2457877766555556
No 12
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=24.89 E-value=57 Score=31.21 Aligned_cols=47 Identities=19% Similarity=0.448 Sum_probs=34.0
Q ss_pred HHHHHHHHhcCCCccEEEEEcCCccccHHHHHHHHhcC---CCCCCeEEec
Q 009029 207 RIVIECFRLGLPNVRWFVLADDDTIFNSDNLVAVLSKY---DPTEMVYIGT 254 (546)
Q Consensus 207 rmv~e~~~~~~p~~kWfv~~DDDTy~~~~nL~~~Lsky---D~~ep~YIG~ 254 (546)
.+++++.. ..|++.||..+|-|++|--.+...-|.+| +....++-|-
T Consensus 61 W~IR~AM~-khPeAEWfWWLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw 110 (213)
T 2p6w_A 61 WIIQQAAE-KFPSTEWFLWLDSDVYVNPKNKNKPITSFIDLSDPNILYHTF 110 (213)
T ss_dssp HHHHHHHH-HCTTCSEEEEECTTEEECGGGTTSCGGGTCCCCCTTCCEEEE
T ss_pred HHHHHHHH-HCCCceEEEEecCCceeecCCCCCcHHHccccccCceeeccc
Confidence 36666664 48999999999999999966666667777 3333366565
No 13
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=20.75 E-value=1.4e+02 Score=30.93 Aligned_cols=102 Identities=12% Similarity=0.028 Sum_probs=60.0
Q ss_pred CCccEEEEEcCCcc-ccHHHHHHHHhcCCCCCCeEEeccCCCCCCCcc---c-------cccccc-------cCcccccC
Q 009029 218 PNVRWFVLADDDTI-FNSDNLVAVLSKYDPTEMVYIGTPSESHSANTY---F-------SHSMAF-------GGGGIAIS 279 (546)
Q Consensus 218 p~~kWfv~~DDDTy-~~~~nL~~~LskyD~~ep~YIG~~se~~~~~~~---~-------g~~fa~-------GGaG~vLS 279 (546)
.+.+|++++|.|.- .+++-+.++++..+..-++.+|........... . .|+... .++-++++
T Consensus 91 a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~g~D~V~g~~~r~~~~~~~~~~~~~~ll~~~~~~~~~~~i~dp~sG~~a~~ 170 (397)
T 2bo4_A 91 TQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWIEQPLGGELLMR 170 (397)
T ss_dssp CCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTSSGGGCSCTTCCCEEEE
T ss_pred CCCCEEEEEcCCCCCCCHHHHHHHHHHHHcCCCEEEEEeccccCCcHHHHHHHHHHHHHHHHHhhccccccCCcccEEEe
Confidence 46899999999995 787777777765544456788863221111100 0 111111 13456899
Q ss_pred HHHHHHHHhhhccccccCCCCCCchHHHHHHHHHcCCCceecC
Q 009029 280 YPLAEALSNIHDDCIDRYPKLYGSDDRLHACITELGIPLTVEP 322 (546)
Q Consensus 280 r~LlkkL~~~~d~C~~~~~~~~~~D~~Lg~Cl~~lGV~LT~~p 322 (546)
+.+++.+.... ... ....|+.|..+-.-+.+.|..+...|
T Consensus 171 R~vl~~l~~~~--~~~-~~~~fg~eiel~~~a~~~G~rI~EVp 210 (397)
T 2bo4_A 171 REVAAMLYEDE--RVR-RRSDWGIDTLYTFVTVQQGVSIYECY 210 (397)
T ss_dssp HHHHHHHHHCH--HHH-TCCSTTHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHhhhc--ccC-cCCCcchHHHHHHHHHHcCCEEEEEE
Confidence 99999885311 000 12357788877776667787776543
Done!