Query 009029
Match_columns 546
No_of_seqs 333 out of 985
Neff 5.7
Searched_HMMs 13730
Date Mon Mar 25 17:13:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009029.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009029hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1qg8a_ c.68.1.1 (A:) Spore co 74.0 2.1 0.00015 38.1 5.8 94 219-312 88-198 (255)
2 d1omza_ c.68.1.15 (A:) Alpha-1 60.6 2.9 0.00021 35.3 3.7 31 218-248 80-110 (265)
3 d1xhba2 c.68.1.17 (A:95-422) P 53.4 3.9 0.00029 37.9 3.5 45 271-320 197-242 (328)
4 d1lzia_ c.68.1.9 (A:) Glycosyl 23.8 18 0.0013 34.1 2.6 99 123-233 51-155 (283)
5 d2bo4a1 c.68.1.18 (A:2-382) Ma 21.9 97 0.0071 29.7 7.9 101 217-321 89-208 (381)
6 d1nrva_ d.93.1.1 (A:) Growth f 19.3 71 0.0052 24.4 5.1 50 357-408 8-57 (105)
7 d1kifa1 c.4.1.2 (A:1-194,A:288 17.2 11 0.00082 32.2 -0.5 27 268-294 215-241 (246)
8 d1o7qa_ c.68.1.9 (A:) alpha-1, 15.6 52 0.0038 30.8 3.9 19 216-234 133-151 (287)
9 d2oq1a2 d.93.1.1 (A:135-258) T 13.4 99 0.0072 24.6 4.7 49 357-408 32-80 (124)
10 d1qcfa2 d.93.1.1 (A:146-248) H 12.1 66 0.0048 24.4 3.0 50 357-408 4-58 (103)
No 1
>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}
Probab=73.96 E-value=2.1 Score=38.13 Aligned_cols=94 Identities=17% Similarity=0.261 Sum_probs=53.5
Q ss_pred CccEEEEEcCCccccHHHHHHHHhcC--CCCCCeEEecc-CCCCC-------------CCccccccccccCcccccCHHH
Q 009029 219 NVRWFVLADDDTIFNSDNLVAVLSKY--DPTEMVYIGTP-SESHS-------------ANTYFSHSMAFGGGGIAISYPL 282 (546)
Q Consensus 219 ~~kWfv~~DDDTy~~~~nL~~~Lsky--D~~ep~YIG~~-se~~~-------------~~~~~g~~fa~GGaG~vLSr~L 282 (546)
+.+|++++|+|.++.++.|.++++.+ +++..++.|.. ..... ....+...+..+++++++++.+
T Consensus 88 ~g~~i~~lD~Dd~~~p~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (255)
T d1qg8a_ 88 EGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAAQVTWNAPCAIDHCSVMHRYSV 167 (255)
T ss_dssp CCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCCSCBSCCTTTSCGGGEEEETHH
T ss_pred ccccccccccccccccchHHHHHHHHHhCCCCCeEeecceeeeeCCCCcEeeeecccchhhhhhhcccccchhHHHHHHH
Confidence 67999999999988865555444432 34444444332 11100 0011223456788889999999
Q ss_pred HHHHHhhhccccccCC-CCCCchHHHHHHHH
Q 009029 283 AEALSNIHDDCIDRYP-KLYGSDDRLHACIT 312 (546)
Q Consensus 283 lkkL~~~~d~C~~~~~-~~~~~D~~Lg~Cl~ 312 (546)
++++........+... ....+|..+...+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl~ 198 (255)
T d1qg8a_ 168 LEKVKEKFGSYWDESPAFYRIGDARFFWRVN 198 (255)
T ss_dssp HHHHHHHHSSSSCCCGGGSTTHHHHHHHHHT
T ss_pred HHHHHHhhCCCccccchhcchhhHHHHHHHH
Confidence 9998765433322111 12356777655553
No 2
>d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=60.59 E-value=2.9 Score=35.33 Aligned_cols=31 Identities=23% Similarity=0.383 Sum_probs=24.8
Q ss_pred CCccEEEEEcCCccccHHHHHHHHhcCCCCC
Q 009029 218 PNVRWFVLADDDTIFNSDNLVAVLSKYDPTE 248 (546)
Q Consensus 218 p~~kWfv~~DDDTy~~~~nL~~~LskyD~~e 248 (546)
-+.+|++++|||+++..+.|.++++.+....
T Consensus 80 a~ge~i~~lD~D~~~~~~~l~~l~~~~~~~~ 110 (265)
T d1omza_ 80 VETNAVLMVDDDTLISAQDLVFAFSIWQQFP 110 (265)
T ss_dssp CCSSEEEEECTTEEECHHHHHHHHHHHTTST
T ss_pred CCcCEEEEeCcccCCCHHHHHHHHHHHHhCC
Confidence 3679999999999999888877777665433
No 3
>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=53.42 E-value=3.9 Score=37.87 Aligned_cols=45 Identities=18% Similarity=0.310 Sum_probs=30.3
Q ss_pred ccCcccccCHHHHHHHHhhhccccccCCCCC-CchHHHHHHHHHcCCCcee
Q 009029 271 FGGGGIAISYPLAEALSNIHDDCIDRYPKLY-GSDDRLHACITELGIPLTV 320 (546)
Q Consensus 271 ~GGaG~vLSr~LlkkL~~~~d~C~~~~~~~~-~~D~~Lg~Cl~~lGV~LT~ 320 (546)
..|+.+++++.+++++-. +|+.. ..+ ++|..|..-+.+.|-.+..
T Consensus 197 ~~g~~~~irr~~f~~vGg-fDe~~----~~~g~ED~Dl~~R~~~~G~~i~~ 242 (328)
T d1xhba2 197 MAGGLFSIDRDYFQEIGT-YDAGM----DIWGGENLEISFRIWQCGGTLEI 242 (328)
T ss_dssp CCSSSEEEEHHHHHHTTS-CCTTS----CTTCCCCSHHHHHHHHTTCEEEE
T ss_pred ecceeeeeeHHHHHHhCC-CCCCC----cCcCchHHHHHHHHHHhCCeEEE
Confidence 356678899999998754 44322 223 4788888878888866543
No 4
>d1lzia_ c.68.1.9 (A:) Glycosyltransferase A catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.83 E-value=18 Score=34.07 Aligned_cols=99 Identities=17% Similarity=0.135 Sum_probs=44.5
Q ss_pred CCCCCcEEEEEecCcccHHHHHHHHHHhhhccCC-cEEEEecCCccccCCCCCCCCCCCceeecC--CccccccCCCCCC
Q 009029 123 ELSLKHIVFGIAGSSHLWKRRKEFVRLWWLPNLM-RGHVWLEDNYKLQKGQGDDSLQLPPIMVSE--DISRFRYTNPTGH 199 (546)
Q Consensus 123 ~~~~~~Ivf~I~Ts~~~~~tR~~~ik~tW~~~~~-r~~vFsD~~~~v~~~~~~~~~~LP~v~is~--dts~f~Y~~~~G~ 199 (546)
++++.=++|++.-...++++-.+-++.-.-+... ..+||+|.+.++.. .+.+ ....+.+.. ...+
T Consensus 51 ~~tIgl~vfATGkY~~Fl~~f~eSaek~Fmpg~~v~yyvFTD~~~~vP~--i~l~-~~~~v~v~~i~~~~~--------- 118 (283)
T d1lzia_ 51 NTTIGLTVFAIKKYVAFLKLFLETAEKHFMVGHRVHYYVFTDQPAAVPR--VTLG-TGRQLSVLEVRAYKR--------- 118 (283)
T ss_dssp TCEEEEEEEECGGGGGGHHHHHHHHHHHBSTTSEEEEEEEESCGGGSCC--CCCC-TTEEEEEEECC-------------
T ss_pred CceEEEEEEEeChHHHHHHHHHHHHHHhcCCCCeeEEEEEECCCccCCc--cccc-cCCceEEEeccCCCC---------
Confidence 4444444444444446666666666666655442 57799998632211 0000 011222211 1111
Q ss_pred CCCchhhH--HHHHH-HHhcCCCccEEEEEcCCcccc
Q 009029 200 PSGLRISR--IVIEC-FRLGLPNVRWFVLADDDTIFN 233 (546)
Q Consensus 200 ~~a~ri~r--mv~e~-~~~~~p~~kWfv~~DDDTy~~ 233 (546)
.+.+++.| ++.+. .+....+++|++++|-|+.|.
T Consensus 119 Wp~iTL~R~~~i~k~i~~~~~~e~DyLf~~DaDm~f~ 155 (283)
T d1lzia_ 119 WQDVSMRRMEMISDFCERRFLSEVDYLVCVDVDMEFR 155 (283)
T ss_dssp ---------------CHHHHHHHCSEEEEECSSEEEC
T ss_pred CchHHHHHHHHHHHHHHHHhhhcCCEEEEeecceEEe
Confidence 12222322 23321 122345799999999999887
No 5
>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}
Probab=21.90 E-value=97 Score=29.71 Aligned_cols=101 Identities=13% Similarity=0.074 Sum_probs=61.4
Q ss_pred CCCccEEEEEcCCc-cccHHHHHHHHhcCCCCCCeEEeccCCCCCCC-c-----------cc------cccccccCcccc
Q 009029 217 LPNVRWFVLADDDT-IFNSDNLVAVLSKYDPTEMVYIGTPSESHSAN-T-----------YF------SHSMAFGGGGIA 277 (546)
Q Consensus 217 ~p~~kWfv~~DDDT-y~~~~nL~~~LskyD~~ep~YIG~~se~~~~~-~-----------~~------g~~fa~GGaG~v 277 (546)
....+.++++|.|. =..++-|.+++...+..-.+.+|..+-..... . .+ ++..+.|| =++
T Consensus 89 ~a~gd~lvflDADl~~~~pe~i~~L~~~i~~g~d~V~g~y~R~~~~grvt~~l~~pll~~l~~~~~~~~i~dPl~G-~~a 167 (381)
T d2bo4a1 89 ETQWERIHFYDADITSFGPDWITKAEEAADFGYGLVRHYFPRASTDAMITWMITRTGFALLWPHTELSWIEQPLGG-ELL 167 (381)
T ss_dssp HCCCSEEEECCTTCSSCCHHHHHHHHHHHHTTCSEEEEECCCCTTSCHHHHHTHHHHHHHHCTTSSGGGCSCTTCC-CEE
T ss_pred hCCCCEEEEEcCCcCcCCHHHHHHHHHHHhhhcCeEEEeeccccCCCceehHhhHHHHHHHhhhhcccccccCCcc-cce
Confidence 35789999999995 34455555555555555677777443221111 0 00 12233333 478
Q ss_pred cCHHHHHHHHhhhccccccCCCCCCchHHHHHHHHHcCCCceec
Q 009029 278 ISYPLAEALSNIHDDCIDRYPKLYGSDDRLHACITELGIPLTVE 321 (546)
Q Consensus 278 LSr~LlkkL~~~~d~C~~~~~~~~~~D~~Lg~Cl~~lGV~LT~~ 321 (546)
|+|.+++.|....+ + .....||-|..|-.-+...|+++...
T Consensus 168 ~~R~~~~~L~~~~~-v--~~~~~~G~Di~lt~~A~~~G~rI~EV 208 (381)
T d2bo4a1 168 MRREVAAMLYEDER-V--RRRSDWGIDTLYTFVTVQQGVSIYEC 208 (381)
T ss_dssp EEHHHHHHHHHCHH-H--HTCCSTTHHHHHHHHHHHTTCCEEEE
T ss_pred eeHHHHHHhhhhcc-c--cccCCcccchHHHHHHHHcCCeEEec
Confidence 99999999876422 1 11246899998777666789888654
No 6
>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=19.26 E-value=71 Score=24.39 Aligned_cols=50 Identities=16% Similarity=0.192 Sum_probs=28.2
Q ss_pred CCCCCCcHHHHHHHHHHhhcCCCCeeeEEEeecCCCceEEEEEeceEEEEeC
Q 009029 357 FYPGLTSLDSLKLFTKAMRADPRSFLQRSICYDLAGHFTLVVSLGYVVQVFP 408 (546)
Q Consensus 357 ~fP~~~~~~~~~~l~~aa~~~~~~~lqr~i~~D~~~~w~~~vs~GySi~~y~ 408 (546)
+++++++.+|-++|.+...-+|+.+++.+- -+ ...+.++|..+=.|.+|.
T Consensus 8 yhg~isR~~Ae~lL~~~g~~dG~FLVR~S~-~~-~g~y~LSv~~~~~v~H~~ 57 (105)
T d1nrva_ 8 FHGRISREESHRIIKQQGLVDGLFLLRDSQ-SN-PKAFVLTLCHHQKIKNFQ 57 (105)
T ss_dssp BCTTCCHHHHHHHHHHTTCCTTEEEEEECS-SC-TTCEEEEEEETTEEEEEE
T ss_pred cCCCCCHHHHHHHHhhcCCCCceEEEEeCC-CC-CCCEEEEEEECCceeEEE
Confidence 457888999988887543334544443322 11 123555666665566553
No 7
>d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Probab=17.16 E-value=11 Score=32.18 Aligned_cols=27 Identities=19% Similarity=0.427 Sum_probs=21.2
Q ss_pred cccccCcccccCHHHHHHHHhhhcccc
Q 009029 268 SMAFGGGGIAISYPLAEALSNIHDDCI 294 (546)
Q Consensus 268 ~fa~GGaG~vLSr~LlkkL~~~~d~C~ 294 (546)
+|.+||+||.+|...+.+..+..++.+
T Consensus 215 ~yghgg~G~~l~~G~a~~~~~lv~~~l 241 (246)
T d1kifa1 215 NYGHGGYGLTIHWGCALEVAKLFGKVL 241 (246)
T ss_dssp EECCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCeEEeehHHHHHHHHHHHHHH
Confidence 478999999999998888777655443
No 8
>d1o7qa_ c.68.1.9 (A:) alpha-1,3-galactosyltransferase catalytic domain {Cow (Bos taurus) [TaxId: 9913]}
Probab=15.62 E-value=52 Score=30.75 Aligned_cols=19 Identities=21% Similarity=0.319 Sum_probs=15.9
Q ss_pred cCCCccEEEEEcCCccccH
Q 009029 216 GLPNVRWFVLADDDTIFNS 234 (546)
Q Consensus 216 ~~p~~kWfv~~DDDTy~~~ 234 (546)
...+++|++++|-|+.|.-
T Consensus 133 ~~~e~Dylf~~DaDm~f~~ 151 (287)
T d1o7qa_ 133 IQHEVDFLFCMDVDQVFQD 151 (287)
T ss_dssp HHHHCSEEEEECSSEEECS
T ss_pred hhccCCeEEEEeCCceEec
Confidence 3568999999999998873
No 9
>d2oq1a2 d.93.1.1 (A:135-258) Tyrosine-protein kinase zap-70 {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.37 E-value=99 Score=24.57 Aligned_cols=49 Identities=16% Similarity=0.255 Sum_probs=28.7
Q ss_pred CCCCCCcHHHHHHHHHHhhcCCCCeeeEEEeecCCCceEEEEEeceEEEEeC
Q 009029 357 FYPGLTSLDSLKLFTKAMRADPRSFLQRSICYDLAGHFTLVVSLGYVVQVFP 408 (546)
Q Consensus 357 ~fP~~~~~~~~~~l~~aa~~~~~~~lqr~i~~D~~~~w~~~vs~GySi~~y~ 408 (546)
+++.++|.+|.++|......++..+++.+- ....+.++|..|=.|.+|.
T Consensus 32 yhg~isR~eAe~lL~~~~~~dGtFLVR~S~---~~g~yvLSv~~~~~v~H~~ 80 (124)
T d2oq1a2 32 YHSSLTREEAERKLYSGAQTDGKFLLRPRK---EQGTYALSLIYGKTVYHYL 80 (124)
T ss_dssp BCSSCCHHHHHHHHHSSCCCTTEEEEEECS---STTEEEEEEEETTEEEEEE
T ss_pred ccCCCCHHHHHHHHhhcCCCCceEEeEecC---CCCCEEEEeecCCceEEEE
Confidence 456888999988887544455554444342 1233555555554565554
No 10
>d1qcfa2 d.93.1.1 (A:146-248) Hemopoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}
Probab=12.12 E-value=66 Score=24.40 Aligned_cols=50 Identities=16% Similarity=0.224 Sum_probs=27.8
Q ss_pred CCCCCCcHHHHHHHHHHhhcCCCCeeeEEEeecCCCceEEEEE-----eceEEEEeC
Q 009029 357 FYPGLTSLDSLKLFTKAMRADPRSFLQRSICYDLAGHFTLVVS-----LGYVVQVFP 408 (546)
Q Consensus 357 ~fP~~~~~~~~~~l~~aa~~~~~~~lqr~i~~D~~~~w~~~vs-----~GySi~~y~ 408 (546)
++++++|.+|-++|.+..+-++.-+++.+-...+ ...++|. +|-.|.+|.
T Consensus 4 y~g~isR~eAe~~L~~~~~~~G~FLVR~S~~~~g--~~~Lsv~~~~~~~~~~v~H~~ 58 (103)
T d1qcfa2 4 FFKGISRKDAERQLLAPGNMLGSFMIRDSETTKG--SYSLSVRDYDPRQGDTVKHYK 58 (103)
T ss_dssp EETTCCHHHHHHHHHSTTCCTTCEEEEECSSSTT--SEEEEEEEEETTTEEEEEEEE
T ss_pred cCCCCCHHHHHHHHhhcCCCCCcEEEEccCCCCC--CeEEEEEecCCCcCceEEEEE
Confidence 3578899999888875544455544444332222 2344443 355565553
Done!