Query 009035
Match_columns 546
No_of_seqs 230 out of 1886
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 17:21:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009035.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/009035hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 9E-114 3E-118 926.6 51.9 479 64-544 5-487 (490)
2 3ed6_A Betaine aldehyde dehydr 100.0 4E-108 1E-112 889.3 55.6 478 65-546 32-518 (520)
3 3ifg_A Succinate-semialdehyde 100.0 4E-108 1E-112 884.0 49.9 471 65-539 12-483 (484)
4 3rh9_A Succinate-semialdehyde 100.0 2E-107 7E-112 881.1 55.3 474 63-540 9-484 (506)
5 2o2p_A Formyltetrahydrofolate 100.0 4E-107 1E-111 881.1 53.5 472 67-539 38-516 (517)
6 3u4j_A NAD-dependent aldehyde 100.0 8E-107 3E-111 880.8 54.4 475 65-541 22-499 (528)
7 3iwj_A Putative aminoaldehyde 100.0 2E-106 5E-111 875.9 56.1 482 63-546 5-497 (503)
8 3ek1_A Aldehyde dehydrogenase; 100.0 3E-107 9E-112 879.9 48.4 471 65-541 32-503 (504)
9 4f3x_A Putative aldehyde dehyd 100.0 4E-107 1E-111 878.0 49.7 473 63-540 23-497 (498)
10 1bxs_A Aldehyde dehydrogenase; 100.0 3E-106 1E-110 871.4 55.5 476 66-541 21-497 (501)
11 3b4w_A Aldehyde dehydrogenase; 100.0 2E-106 8E-111 872.0 52.2 474 64-540 7-482 (495)
12 3k2w_A Betaine-aldehyde dehydr 100.0 2E-106 6E-111 874.0 50.2 478 61-542 8-490 (497)
13 1o04_A Aldehyde dehydrogenase, 100.0 4E-106 1E-110 870.8 51.3 475 67-541 21-496 (500)
14 3i44_A Aldehyde dehydrogenase; 100.0 1E-105 4E-110 866.4 53.7 468 64-537 24-495 (497)
15 3r31_A BADH, betaine aldehyde 100.0 2E-106 8E-111 874.9 47.7 470 63-541 12-489 (517)
16 1a4s_A ALDH, betaine aldehyde 100.0 1E-105 4E-110 868.4 51.2 472 65-541 19-497 (503)
17 3jz4_A Succinate-semialdehyde 100.0 2E-105 8E-110 863.1 53.2 471 65-539 9-480 (481)
18 3prl_A NADP-dependent glyceral 100.0 1E-105 5E-110 867.2 50.3 467 65-541 11-484 (505)
19 2ve5_A BADH, betaine aldehyde 100.0 3E-105 9E-110 865.3 52.0 479 61-542 2-485 (490)
20 2d4e_A 5-carboxymethyl-2-hydro 100.0 4E-105 1E-109 866.4 53.2 470 67-541 28-506 (515)
21 1wnd_A Putative betaine aldehy 100.0 3E-105 1E-109 862.3 50.7 469 65-539 23-494 (495)
22 2imp_A Lactaldehyde dehydrogen 100.0 8E-105 3E-109 858.8 51.6 471 65-539 6-478 (479)
23 3qan_A 1-pyrroline-5-carboxyla 100.0 1E-104 4E-109 865.9 52.1 470 65-541 37-517 (538)
24 4e4g_A Methylmalonate-semialde 100.0 4E-105 2E-109 865.8 48.4 475 63-542 24-507 (521)
25 3r64_A NAD dependent benzaldeh 100.0 8E-104 3E-108 855.5 50.2 479 61-546 8-496 (508)
26 2w8n_A Succinate-semialdehyde 100.0 7E-104 2E-108 852.1 48.4 467 66-539 13-485 (487)
27 3ros_A NAD-dependent aldehyde 100.0 8E-104 3E-108 849.7 48.3 454 82-540 5-458 (484)
28 3pqa_A Lactaldehyde dehydrogen 100.0 2E-103 6E-108 847.0 49.3 458 68-540 2-464 (486)
29 4dng_A Uncharacterized aldehyd 100.0 2E-103 7E-108 849.5 49.6 471 65-542 6-480 (485)
30 1euh_A NADP dependent non phos 100.0 5E-103 2E-107 843.9 49.0 464 65-540 4-474 (475)
31 1t90_A MMSDH, probable methylm 100.0 7E-103 3E-107 844.2 50.2 474 65-544 5-484 (486)
32 2j6l_A Aldehyde dehydrogenase 100.0 1E-102 3E-107 845.4 49.8 470 64-540 22-499 (500)
33 1uxt_A Glyceraldehyde-3-phosph 100.0 5E-103 2E-107 847.5 46.5 470 65-545 18-498 (501)
34 3ty7_A Putative aldehyde dehyd 100.0 3E-103 1E-107 846.5 44.3 467 64-538 6-475 (478)
35 1uzb_A 1-pyrroline-5-carboxyla 100.0 6E-102 2E-106 842.5 52.1 467 66-539 38-515 (516)
36 3etf_A Putative succinate-semi 100.0 9E-101 3E-105 824.4 50.9 457 79-540 5-461 (462)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 8E-100 3E-104 829.4 49.8 477 64-546 62-559 (563)
38 4h7n_A Aldehyde dehydrogenase; 100.0 2.6E-99 9E-104 814.7 46.0 461 78-546 3-472 (474)
39 3ju8_A Succinylglutamic semial 100.0 8.4E-99 3E-103 813.4 47.5 461 67-540 7-471 (490)
40 4f9i_A Proline dehydrogenase/d 100.0 4.6E-97 2E-101 849.0 49.8 470 65-540 531-1010(1026)
41 2y53_A Aldehyde dehydrogenase 100.0 2.6E-97 9E-102 809.8 44.0 465 66-539 8-518 (534)
42 3lns_A Benzaldehyde dehydrogen 100.0 3.6E-95 1.2E-99 779.0 48.4 444 81-539 6-456 (457)
43 3sza_A Aldehyde dehydrogenase, 100.0 1.2E-93 4.1E-98 768.1 48.3 428 100-540 15-448 (469)
44 3v4c_A Aldehyde dehydrogenase 100.0 5.8E-93 2E-97 774.5 41.4 453 63-536 27-514 (528)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 9.1E-91 3.1E-95 754.2 42.9 443 77-537 3-480 (510)
46 3haz_A Proline dehydrogenase; 100.0 6.8E-89 2.3E-93 779.8 45.3 435 97-540 544-987 (1001)
47 2h5g_A Delta 1-pyrroline-5-car 100.0 1E-83 3.6E-88 689.5 23.7 404 84-540 10-435 (463)
48 3k9d_A LMO1179 protein, aldehy 100.0 5.1E-81 1.7E-85 670.7 27.7 421 96-542 5-451 (464)
49 1vlu_A Gamma-glutamyl phosphat 100.0 2E-81 7E-86 672.6 21.9 395 104-540 15-440 (468)
50 4ghk_A Gamma-glutamyl phosphat 100.0 1.2E-78 4E-83 648.5 27.5 389 102-540 25-439 (444)
51 1o20_A Gamma-glutamyl phosphat 100.0 1.1E-78 3.6E-83 645.7 26.5 387 102-540 13-422 (427)
52 3my7_A Alcohol dehydrogenase/a 100.0 3E-77 1E-81 639.4 28.5 419 97-543 1-452 (452)
53 4gic_A HDH, histidinol dehydro 97.3 0.19 6.4E-06 51.6 29.4 265 193-537 119-400 (423)
54 1kae_A HDH, histidinol dehydro 95.8 2.1 7E-05 44.1 27.2 260 194-537 114-393 (434)
55 3lap_A Arginine repressor; arg 74.2 29 0.00098 31.0 10.9 119 133-269 22-146 (170)
56 3v4g_A Arginine repressor; vib 69.0 35 0.0012 30.7 10.2 38 229-269 115-152 (180)
57 2fiu_A Conserved hypothetical 63.1 13 0.00043 30.0 5.6 61 391-471 16-77 (99)
58 1b4a_A Arginine repressor; hel 59.1 53 0.0018 28.5 9.3 36 230-269 90-125 (149)
59 1s7i_A Hypothetical protein PA 54.4 23 0.00079 29.8 6.0 73 393-471 30-108 (124)
60 3fxd_A Protein ICMQ; helix bun 50.4 52 0.0018 23.4 6.1 47 100-152 5-51 (57)
61 2xw6_A MGS, methylglyoxal synt 43.8 11 0.00036 32.5 2.1 87 216-313 16-111 (134)
62 2yvq_A Carbamoyl-phosphate syn 42.1 30 0.001 29.7 4.9 63 250-314 60-132 (143)
63 1b4b_A Arginine repressor; cor 41.8 46 0.0016 24.9 5.3 36 230-269 12-47 (71)
64 1vmd_A MGS, methylglyoxal synt 41.2 1.5E+02 0.0051 26.5 9.3 122 197-344 19-151 (178)
65 2zfz_A Arginine repressor; DNA 40.7 49 0.0017 25.3 5.4 36 230-269 20-55 (79)
66 3lo3_A Uncharacterized conserv 38.1 50 0.0017 26.1 5.2 62 390-471 14-76 (94)
67 3v42_A Folliculin; tumor suppr 36.9 21 0.00073 33.4 3.2 67 221-295 21-87 (226)
68 1xxa_A ARGR, arginine represso 35.9 41 0.0014 25.7 4.2 37 230-269 14-50 (78)
69 3pzy_A MOG; ssgcid, seattle st 35.9 29 0.00098 30.7 3.8 52 244-296 27-80 (164)
70 1b93_A Protein (methylglyoxal 34.9 55 0.0019 28.5 5.4 114 205-344 12-135 (152)
71 2p5m_A Arginine repressor; alp 34.9 48 0.0016 25.6 4.5 36 230-269 24-59 (83)
72 1y5e_A Molybdenum cofactor bio 34.6 24 0.00083 31.2 3.1 54 242-295 29-85 (169)
73 2ioj_A Hypothetical protein AF 34.3 44 0.0015 28.3 4.7 49 261-310 53-101 (139)
74 3iwt_A 178AA long hypothetical 30.7 47 0.0016 29.4 4.4 54 242-295 38-94 (178)
75 3rfq_A Pterin-4-alpha-carbinol 30.4 33 0.0011 31.0 3.3 55 242-296 47-103 (185)
76 3hhl_A RPA0582; alpha-beta-bar 29.8 62 0.0021 27.8 4.9 66 389-471 45-111 (143)
77 2pjk_A 178AA long hypothetical 23.4 54 0.0018 29.3 3.4 57 240-296 36-95 (178)
78 1wu2_A MOEA protein, molybdopt 21.6 27 0.00093 35.6 1.1 53 244-296 211-264 (396)
79 1mkz_A Molybdenum cofactor bio 21.1 53 0.0018 29.1 2.8 52 244-295 28-82 (172)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=9e-114 Score=926.62 Aligned_cols=479 Identities=43% Similarity=0.745 Sum_probs=460.8
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
...++||||+|+++.++++++++||+||++|++++.++.+|+++|+++|++||. .|+++|..+|.++|++++++|++|
T Consensus 5 ~~~kl~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~ 82 (490)
T 2wme_A 5 EEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDILRER 82 (490)
T ss_dssp CCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCcEEECCeeeCCCCCCEEEeeCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHh
Confidence 345799999999998999999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
.++|++++++|+|||+.+++..|+..+++.++||+.+++++.+...+...+...+++++|+|||++|+|||||+.+.+++
T Consensus 83 ~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~ 162 (490)
T 2wme_A 83 NDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWK 162 (490)
T ss_dssp HHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEEEEeccccCcchhhhhh
Confidence 99999999999999999998767999999999999999998887776666677899999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|.+.++
T Consensus 163 ~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~~a 242 (490)
T 2wme_A 163 SAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASAS 242 (490)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECChHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987666
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
..++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|||+|++
T Consensus 243 ~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~ 322 (490)
T 2wme_A 243 SSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDEN 322 (490)
T ss_dssp HHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCcccc
Confidence 65899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCCHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 459 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ 459 (546)
+++||+++..+++++.++|++++++|+++++||.... .+|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 323 ~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 402 (490)
T 2wme_A 323 TNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDED 402 (490)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESCHH
T ss_pred CccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhccccCCEEEEEEeCCHH
Confidence 9999999999999999999999999999999998643 368999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+||++||+.|+|+++
T Consensus 403 eAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PFGG~k~SG~Gre~G~~gl~~ft~~K~v~i~ 482 (490)
T 2wme_A 403 EAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKSVQVE 482 (490)
T ss_dssp HHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCCCCCCCCCcccccccccCchhHHHHHHHhhceeEEEEE
Confidence 99999999999999999999999999999999999999999888888999999999999999999999999999999999
Q ss_pred CCCCC
Q 009035 540 LKNPA 544 (546)
Q Consensus 540 ~~~~~ 544 (546)
+++.+
T Consensus 483 ~g~~~ 487 (490)
T 2wme_A 483 LGDYA 487 (490)
T ss_dssp CSCCC
T ss_pred CCCCC
Confidence 88753
No 2
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=4.2e-108 Score=889.33 Aligned_cols=478 Identities=38% Similarity=0.671 Sum_probs=457.6
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhc--ccCCCCCCCHHHHHHHHHHHHHHHHH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAF--DEGPWPRMTAYERSKIILRFADLLER 142 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~--~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++|| . .|+.++..+|.++|++++++|++
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~~~--~w~~~~~~~R~~~L~~~a~~l~~ 109 (520)
T 3ed6_A 32 SQRQYIDGEWVESANKNTRDIINPYNQEVIFTVSEGTKEDAERAILAARRAFESG--EWSQETAETRGKKVRAIADKIKE 109 (520)
T ss_dssp CCSEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHHHT--TTTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCceEECCEEecCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHHHHHHH
Confidence 4478999999998888999999999999999999999999999999999999 7 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHH
Q 009035 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (546)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (546)
+.++|++++++|+|||+.+++. |+..+++.++|++.+++++.+...+.. .+...++.++|+|||++|+|||||+.+.+
T Consensus 110 ~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 188 (520)
T 3ed6_A 110 HREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVVTQITPWNYPLLQAS 188 (520)
T ss_dssp THHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccEEEEECCCccHHHHHH
Confidence 9999999999999999999986 999999999999999988777655433 45667899999999999999999999999
Q ss_pred HHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
++++|||++||+||+|||+.+|+++.+|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 189 ~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~FTGS~~vG~~i~~~ 268 (520)
T 3ed6_A 189 WKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKN 268 (520)
T ss_dssp HHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
+++ ++||+++|||||||+||++|||+|.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 269 aa~-~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d 347 (520)
T 3ed6_A 269 AAN-NVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFD 347 (520)
T ss_dssp HHT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTS
T ss_pred hhh-cCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 987 7999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEeCC
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 457 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~ 457 (546)
+++++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 348 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 427 (520)
T 3ed6_A 348 ADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEEVFGPVVTVEGFET 427 (520)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESS
T ss_pred CCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCceeCcEEEEEEeCC
Confidence 999999999999999999999999999999999998642 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+||||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 428 ~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gre~G~~gl~~~t~~k~v~ 507 (520)
T 3ed6_A 428 EQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHPYFAQAPWGGYKQSGIGRELGKEGLEEYLVSKHIL 507 (520)
T ss_dssp HHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCcCCccchHHHHHHhhceEEEE
Confidence 99999999999999999999999999999999999999999998877889999999999999999999999999999999
Q ss_pred EeCCC--CCCC
Q 009035 538 TALKN--PAWL 546 (546)
Q Consensus 538 ~~~~~--~~~~ 546 (546)
++... ..||
T Consensus 508 ~~~~~~~~~~~ 518 (520)
T 3ed6_A 508 TNTNPQLVNWF 518 (520)
T ss_dssp EESSCCCCCCS
T ss_pred EcCCCCccCcc
Confidence 98763 3575
No 3
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=3.6e-108 Score=883.96 Aligned_cols=471 Identities=38% Similarity=0.625 Sum_probs=453.1
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 12 ~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 89 (484)
T 3ifg_A 12 RHQAYIGGEWQAADSDATFEVFDPATGESLGTVPKMGAAETARAIEAAQAAWA--GWRMKTAKERAAILRRWFDLVIANS 89 (484)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEeeCCCCCEEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
++|++++++|+|||+.+++. |+..+++.++||+.+++++.+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 90 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 168 (484)
T 3ifg_A 90 DDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAITPWNFPAAMIARK 168 (484)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSSEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcEEEEECCCcChHHHHHHH
Confidence 99999999999999999875 999999999999999888776655533 3567889999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 169 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~~~G~~i~~~aa 248 (484)
T 3ifg_A 169 VGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGSTAVGRLLMAQSA 248 (484)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHTG
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 249 ~-~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 327 (484)
T 3ifg_A 249 P-TVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESG 327 (484)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred c-cCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
+++||+++..+++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 328 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 407 (484)
T 3ifg_A 328 ATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPLFRFASEEELVR 407 (484)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999987555799999999999999999999999999999999999999999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 408 ~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~~~~~k~v~~~ 483 (484)
T 3ifg_A 408 LANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGLISNEVAPFGGVKQSGLGREGSHYGIDDYVVIKYLCVA 483 (484)
T ss_dssp HHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCEETTEECCBSTTTTTGGGEEEEEEEEE
T ss_pred HHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCcCCCCchHHHHHHhhceEEEEEe
Confidence 9999999999999999999999999999999999999877788999999999999999999999999999999875
No 4
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=2.1e-107 Score=881.11 Aligned_cols=474 Identities=35% Similarity=0.558 Sum_probs=455.4
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (546)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|++++++|++
T Consensus 9 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 86 (506)
T 3rh9_A 9 LENLTGYIGGRWKDSAGGATFDVYNPATGSVIAKVPSMPEEDVVAAVEAGQSALR--LTNPWPIETRRKWLEDIRDGLKE 86 (506)
T ss_dssp GSCCSEEETTEEECCCTTCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHCC--SSSCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 3455789999999988889999999999999999999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeee-ccceeEEEEcCccchHHHHH
Q 009035 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLH-EPIGVAGQIIPWNFPLLMFA 221 (546)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~-~P~GVv~~i~p~n~P~~~~~ 221 (546)
+.++|++++++|+|||+.+++ .|+..+++.++|++.++++..+...+...+...++.+ +|+|||++|+|||||+.+.+
T Consensus 87 ~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 165 (506)
T 3rh9_A 87 NREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVPWNFPIGMIA 165 (506)
T ss_dssp THHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCSEEEECCSSSTTHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceEEEEECCCchHHHHHH
Confidence 999999999999999999998 5999999999999999998877665544456678889 99999999999999999999
Q ss_pred HHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 166 ~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~vG~~i~~~ 245 (506)
T 3rh9_A 166 KKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFTGSTEVGRKLIVD 245 (506)
T ss_dssp HHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999888999999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 246 aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~ 324 (506)
T 3rh9_A 246 TAE-QVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMN 324 (506)
T ss_dssp TTT-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHHHHHHHHHCCBSCTTS
T ss_pred hhh-cCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHHHHHHHHhccCCCCcc
Confidence 887 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC-CCceecceeeccCCCCCcccccccccceEEEEEeCCHHH
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~e 460 (546)
+++++||+++.++++++.++|++++++|+++++||...+. .|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 325 ~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 404 (506)
T 3rh9_A 325 DGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPLVPMALFRTEEE 404 (506)
T ss_dssp TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHH
T ss_pred cCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCcEEEEEEeCCHHH
Confidence 9999999999999999999999999999999999986544 799999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|++|+++||+.|+|+++.
T Consensus 405 Ai~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~K~v~~~~ 484 (506)
T 3rh9_A 405 VIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTGPTPEAPFGGMKASGIGREGGLEGLFEFVEAQTVPRGF 484 (506)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHTTTEEEEEEEEC-
T ss_pred HHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCccCcCcCcCCcCccHHHHHHhcceEEEEEcC
Confidence 99999999999999999999999999999999999999999888889999999999999999999999999999998764
No 5
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=4e-107 Score=881.10 Aligned_cols=472 Identities=43% Similarity=0.807 Sum_probs=450.3
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|+.+.++++++++||+||++|++++.++.+|+++|+++|++||++|.|+.+|..+|.++|++++++|+++.++
T Consensus 38 ~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~~~e 117 (517)
T 2o2p_A 38 QLFIGGEFVDAEGSKTYNTINPTDGSVICQVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYRLADVMEQHQEE 117 (517)
T ss_dssp SEEETTEEECCGGGCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeEECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHhHHH
Confidence 57999999987667899999999999999999999999999999999999855699999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC----CCCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA----DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~----~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
|++++++|+|||+.+++..|+..+++.++||+.+++++.+...+. ..+...++.++|+|||++|+|||||+.+.++
T Consensus 118 la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 197 (517)
T 2o2p_A 118 LATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPVGVCGIVIPWNYPLMMLSW 197 (517)
T ss_dssp HHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEecCCccEEEECCCcchHHHHHH
Confidence 999999999999999874599999999999999998877665443 2223568999999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 198 ~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTGS~~~G~~I~~~a 277 (517)
T 2o2p_A 198 KTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSC 277 (517)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred h-hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 303 A-KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 303 a-~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
+ + ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|
T Consensus 278 a~~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~ 356 (517)
T 2o2p_A 278 ALS-NVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLE 356 (517)
T ss_dssp HHH-TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBSCTTS
T ss_pred HHh-cCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 8 6 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCC--HH
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LD 459 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~--~~ 459 (546)
+++++||+++.++++++.++|++++++|+++++||......|+|++|||+.+++++|++++||+||||++|++|+| +|
T Consensus 357 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~~d 436 (517)
T 2o2p_A 357 RDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPIMIISRFADGDVD 436 (517)
T ss_dssp TTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECTTCSH
T ss_pred CCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccEEEEEEcCCCCHH
Confidence 9999999999999999999999999999999999986544699999999999999999999999999999999999 99
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 437 eAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~~~~k~v~~~ 516 (517)
T 2o2p_A 437 AVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYNKTDVAAPFGGFKQSGFGKDLGEAALNEYLRIKTVTFE 516 (517)
T ss_dssp HHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCCGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCCCCCCCCCcCCcCcCCcCccChHHHHHHhCCceEEEee
Confidence 99999999999999999999999999999999999999999877788999999999999999999999999999999875
No 6
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=8.1e-107 Score=880.77 Aligned_cols=475 Identities=43% Similarity=0.730 Sum_probs=455.4
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
..++||||+|+.+.++++++++||+| |+++++++.++.+|+++|+++|++||+++.|+.++..+|.++|++++++|+++
T Consensus 22 ~~~~~I~G~~~~~~~~~~~~v~nP~t~g~~i~~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~~L~~~a~~l~~~ 101 (528)
T 3u4j_A 22 RYQMLVDGKSVDAASGSTIDRVSPGHAGEVVGTWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSRLMFKVADLILAR 101 (528)
T ss_dssp BCCEEETTEEECCTTCCEEEEECTTSTTCEEEEEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCEEEEeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHHHHHHH
Confidence 45789999999988889999999999 99999999999999999999999999322899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
.++|++++++|+|||+.++. .|+..+++.++|++.++++..+...+.. .+...++.++|+|||++|+|||||+.+.++
T Consensus 102 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 180 (528)
T 3u4j_A 102 QEELALIESLEVGKPIAQAR-GEIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVGIITPWNFPFIIASE 180 (528)
T ss_dssp HHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceEEEEECCCccHHHHHHH
Confidence 99999999999999999995 5999999999999999988877665544 456789999999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~a 260 (528)
T 3u4j_A 181 RVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA 260 (528)
T ss_dssp HHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999998
Q ss_pred hhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCC
Q 009035 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (546)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~ 382 (546)
++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+++
T Consensus 261 a~-~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~ 339 (528)
T 3u4j_A 261 AR-TVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNE 339 (528)
T ss_dssp HT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHCCEECTTST
T ss_pred Hh-cCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHHHHHHHHhhcCCCCCCc
Confidence 87 89999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCC-CCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGA-KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 383 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~-~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
++++||+++.++++++.++|++++++|+++++||..... .|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 340 ~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 419 (528)
T 3u4j_A 340 RTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIFGPVLSTLTFKTADEA 419 (528)
T ss_dssp TCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceeeccEEEEEEeCCHHHH
Confidence 999999999999999999999999999999999986544 7999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCC
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~ 541 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|++|+++||+.|+|+++..
T Consensus 420 i~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~~ 499 (528)
T 3u4j_A 420 VALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVIDGTPELPIGGYKKSGLGRELGRYGFDEYSQFKGVHVTLG 499 (528)
T ss_dssp HHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSTTHHHHHTEEEEEEEEESS
T ss_pred HHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceEEEEEeCC
Confidence 99999999999999999999999999999999999999988888999999999999999999999999999999998875
No 7
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=1.5e-106 Score=875.85 Aligned_cols=482 Identities=40% Similarity=0.727 Sum_probs=456.6
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC---CCCCCCHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG---PWPRMTAYERSKIILRFADL 139 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~---~W~~~~~~~R~~~L~~~a~~ 139 (546)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||.++ .|+.++..+|.++|++++++
T Consensus 5 ~~~~~~~i~g~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~~~L~~~a~~ 84 (503)
T 3iwj_A 5 IPTRQLFINGDWKAPVLNKRIPVINPATQNIIGDIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRARYLRAIAAK 84 (503)
T ss_dssp CCCCCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHHHHHHHHHHH
T ss_pred CCCCceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHHHHHHHHHHH
Confidence 344578999999998888999999999999999999999999999999999999843 69999999999999999999
Q ss_pred HHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCccc-C--C-CCCCceeeeeccceeEEEEcCccc
Q 009035 140 LERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-P--A-DGPYHVQTLHEPIGVAGQIIPWNF 215 (546)
Q Consensus 140 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~-~--~-~~~~~~~~~~~P~GVv~~i~p~n~ 215 (546)
|+++.++|++++++|+|||+.+++. |+..+++.++|++.+++++.+... + . ..+...++.++|+|||++|+||||
T Consensus 85 l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~ 163 (503)
T 3iwj_A 85 VTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGVVGLITPWNY 163 (503)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCEEEEECCSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCceEEEECCCch
Confidence 9999999999999999999999875 999999999999999987765431 1 1 134568899999999999999999
Q ss_pred hHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHH
Q 009035 216 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295 (546)
Q Consensus 216 P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g 295 (546)
|+.+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|
T Consensus 164 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G 243 (503)
T 3iwj_A 164 PMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKVAFTGSSATG 243 (503)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEEEEESCHHHH
T ss_pred HHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEEEEECcHHHH
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcc
Q 009035 296 KIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRV 375 (546)
Q Consensus 296 ~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~ 375 (546)
+.|++.++. ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++
T Consensus 244 ~~i~~~aa~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~ 322 (503)
T 3iwj_A 244 SKIMTAAAQ-LVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIK 322 (503)
T ss_dssp HHHHHHHGG-GTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHHHHHHHHHHHTCC
T ss_pred HHHHHHHhc-CCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHHHHHHHHHHHhcc
Confidence 999999887 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC--CCCceecceeeccCCCCCcccccccccceEEEE
Q 009035 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSIL 453 (546)
Q Consensus 376 vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~ 453 (546)
+|+|+++++++||+++.++++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 323 ~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 402 (503)
T 3iwj_A 323 ISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREEVFGPVLCVK 402 (503)
T ss_dssp BSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEE
T ss_pred CCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCceeeCceEEEE
Confidence 999999999999999999999999999999999999999998654 579999999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhhee
Q 009035 454 KYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQV 533 (546)
Q Consensus 454 ~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~ 533 (546)
+|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+|+++|++.
T Consensus 403 ~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~PfGG~k~SG~G~~~G~~g~~~f~~~ 482 (503)
T 3iwj_A 403 TFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSV 482 (503)
T ss_dssp EESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEE
T ss_pred EeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcccCCCcchHHHHHHhhCe
Confidence 99999999999999999999999999999999999999999999999887888999999999999999999999999999
Q ss_pred eEEEEeCCC--CCCC
Q 009035 534 KAVVTALKN--PAWL 546 (546)
Q Consensus 534 k~v~~~~~~--~~~~ 546 (546)
|+|++++.. +.||
T Consensus 483 k~v~~~~~~~~~~~~ 497 (503)
T 3iwj_A 483 KQVTQYISEEPWGWY 497 (503)
T ss_dssp EEEEEECCSSCCCCS
T ss_pred EEEEEeCCCCccccc
Confidence 999987653 3565
No 8
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=2.7e-107 Score=879.89 Aligned_cols=471 Identities=38% Similarity=0.644 Sum_probs=452.6
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 32 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 109 (504)
T 3ek1_A 32 KSQCLVNGRWIDAADGTTIKVTNPADGSVIGTVPSLSVATIKEAIDASAKALS--GWAAKTAKERAGILRKWFDLIIANA 109 (504)
T ss_dssp CSSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEeeCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHHH
Confidence 44789999999987889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
++|++++++|+|||+.+++. |+..+++.++||+.++++..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 110 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 188 (504)
T 3ek1_A 110 DDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAITPWNFPAAMITRK 188 (504)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceEEEEECCCcchHHHHHHH
Confidence 99999999999999999876 999999999999999988776655433 3466789999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 189 ~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 268 (504)
T 3ek1_A 189 AAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGSTEVGRLLMAQCA 268 (504)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++
T Consensus 269 ~-~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 347 (504)
T 3ek1_A 269 P-TIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPG 347 (504)
T ss_dssp G-GTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-hcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHHHHHHHhhcccCCCcccc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
+++||+++..+++++.++|++++++|+++++||.. ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 348 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 425 (504)
T 3ek1_A 348 VVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLFAFDTEEEVIA 425 (504)
T ss_dssp CCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhcccccCcEEEEEEeCCHHHHHH
Confidence 99999999999999999999999999999999975 3689999999999999999999999999999999999999999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCC
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~ 541 (546)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+|+++||+.|+|+++++
T Consensus 426 ~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~~~~g 503 (504)
T 3ek1_A 426 QANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGLISNEVAPFGGVKQSGLGREGSKYGIEEYLETKYICSAYK 503 (504)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSCCCCSSSCBCCSGGGEESCBSTTTSGGGGEEEEEEEEECC
T ss_pred HHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCcCCcCcCcCCCCCcHHHHHHhhceEEEEEecC
Confidence 999999999999999999999999999999999999987778899999999999999999999999999999988764
No 9
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=4.1e-107 Score=878.00 Aligned_cols=473 Identities=35% Similarity=0.614 Sum_probs=452.9
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (546)
+...++||||+|+.+.++ +++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 23 ~~~~~~~I~G~~~~~~~~-~~~v~nP~tg~~i~~v~~~~~~dv~~Av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 99 (498)
T 4f3x_A 23 MMDTQLLIGSRFEAGTEA-EEHILNPRTGAGIIDLAEASHAQIDAAVDAAERAFV--GWSQTTPAERSNALLKIADAIEK 99 (498)
T ss_dssp CCCCCEEETTEEECCCSC-EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEeeCCCC-eEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 445679999999988766 999999999999999999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHH
Q 009035 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (546)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (546)
+.++|++++++|+|||+.++...|+..+++.++||+.+++++.+...+. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 100 ~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~ 179 (498)
T 4f3x_A 100 EADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIVGSIAPWNYPLMMMA 179 (498)
T ss_dssp THHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECCEEEEECCSSSHHHHHH
T ss_pred hHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcceEEEECCCchHHHHHH
Confidence 9999999999999999999834699999999999999998877665432 235568899999999999999999999999
Q ss_pred HHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
+++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 180 ~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~ 258 (498)
T 4f3x_A 180 WKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGMVSITGDIATGKKVLAA 258 (498)
T ss_dssp HHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 99999999999999999999999999999999999 99999999999888999999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|
T Consensus 259 aa~-~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d 337 (498)
T 4f3x_A 259 AAK-TVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDD 337 (498)
T ss_dssp HHT-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHTTCCCSCSSG
T ss_pred HHh-hCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHHHHHHHHHhcccCCCcc
Confidence 987 8999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCC-eEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHH
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGA-KLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga-~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~e 460 (546)
+++++||+++..+++++.++|++++++|+ ++++||...+.+|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 338 ~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~de 417 (498)
T 4f3x_A 338 TENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVSVTRFTGKDD 417 (498)
T ss_dssp GGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECTTSC
T ss_pred ccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEEEEEeCCHHH
Confidence 99999999999999999999999999999 99999987666899999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 418 Ai~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~~l~~~t~~k~v~~~~ 497 (498)
T 4f3x_A 418 AVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFMLTNEMPHGGIKQSGYGKDMSVYALEDYTAVRHIMINH 497 (498)
T ss_dssp HHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCSGGGEECCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCcCCcCcCCcCccchHHHHHHhhceEEEEEeC
Confidence 99999999999999999999999999999999999999998887899999999999999999999999999999998764
No 10
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=3.4e-106 Score=871.43 Aligned_cols=476 Identities=56% Similarity=0.975 Sum_probs=452.8
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++| .|+.++..+|.++|++++++|+++.
T Consensus 21 ~~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~ 100 (501)
T 1bxs_A 21 TKIFINNEWHSSVSGKKFPVFNPATEEKLCEVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRLLNKLADLIERDR 100 (501)
T ss_dssp CSEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred cCeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHHHHHHHHHHHHHH
Confidence 357999999987777899999999999999999999999999999999999843 5999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
++|++++++|+|||+.++...|+..+++.++||+.+++++.+...+...+...++.++|+|||++|+|||||+.+.++++
T Consensus 101 ~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~ 180 (501)
T 1bxs_A 101 LLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQIIPWNFPLLMFLWKI 180 (501)
T ss_dssp HHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEEEECCCcchHHHHHHHH
Confidence 99999999999999998766799999999999999998877765444444567899999999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhh
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAK 304 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~ 304 (546)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.++.
T Consensus 181 a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa~ 260 (501)
T 1bxs_A 181 GPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGK 260 (501)
T ss_dssp HHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEEECCHHHHHHHHHHhhh
Confidence 99999999999999999999999999999999999999999999888899999999999999999999999999999982
Q ss_pred cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCC
Q 009035 305 SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGI 384 (546)
Q Consensus 305 ~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~ 384 (546)
.++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+++
T Consensus 261 ~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~ 340 (501)
T 1bxs_A 261 SNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGV 340 (501)
T ss_dssp TTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTC
T ss_pred ccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCC
Confidence 38999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHH
Q 009035 385 QQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQR 464 (546)
Q Consensus 385 ~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~ 464 (546)
++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||++
T Consensus 341 ~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~ 420 (501)
T 1bxs_A 341 SQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKR 420 (501)
T ss_dssp CBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHH
T ss_pred ccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccceEEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999865447999999999999999999999999999999999999999999
Q ss_pred HHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCC
Q 009035 465 SNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541 (546)
Q Consensus 465 ~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~ 541 (546)
+|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++|++.|+|+.+..
T Consensus 421 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~pfGG~k~SG~G~~~G~~~l~~f~~~K~v~~~~~ 497 (501)
T 1bxs_A 421 ANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSVVSAQCPFGGFKMSGNGRELGEYGFHEYTEVKTVTIKIS 497 (501)
T ss_dssp HHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEECS
T ss_pred HhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCCCCCCCCCCCCcCcCCcCccchHHHHHHhhCeeEEEEccC
Confidence 99999999999999999999999999999999999987777899999999999999999999999999999988753
No 11
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.4e-106 Score=872.02 Aligned_cols=474 Identities=37% Similarity=0.625 Sum_probs=451.3
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
.+.++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++|.|+.++..+|.++|++++++|+++
T Consensus 7 ~~~~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~~~a~~l~~~ 86 (495)
T 3b4w_A 7 EYDKLFIGGKWTKPSTSDVIEVRCPATGEYVGKVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIAAAVKMLAER 86 (495)
T ss_dssp ECSSEEETTEEECCSSCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHHHHHHHHHH
Confidence 44578999999987777899999999999999999999999999999999999855699999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
.++|++++++|+|||+.+++..|+..+++.++|++.+++++.+...+.+.+...++.++|+|||++|+|||||+.+.+++
T Consensus 87 ~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 166 (495)
T 3b4w_A 87 KDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGAIVAWNVPLFLAVNK 166 (495)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCceEEEECCCcchHHHHHHH
Confidence 99999999999999999987459999999999999999887776544333446789999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|++||+||+|+||||+.+|+.|++.++
T Consensus 167 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g-~~~~g~~L~~~~~v~~I~FTGS~~~G~~i~~~aa 245 (495)
T 3b4w_A 167 IAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPG-GIETGQALTSNPDIDMFTFTGSSAVGREVGRRAA 245 (495)
T ss_dssp HHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCB-SHHHHHHHTTCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999 8899999999999999999999999999999998
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 246 ~-~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 324 (495)
T 3b4w_A 246 E-MLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPA 324 (495)
T ss_dssp H-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTT
T ss_pred h-cCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHHHHHHHhcCCCCCccCC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC--CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
+++||+++.++++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 325 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 404 (495)
T 3b4w_A 325 AQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPVLAIIPYDTEEDA 404 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccceEEEEecCCHHHH
Confidence 9999999999999999999999999999999997643 36999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||+++ ..+.+||||+|.||+|+++|.+|+++|++.|+|+.+.
T Consensus 405 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~-~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~k~v~~~~ 482 (495)
T 3b4w_A 405 IAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA-FDPGSPFGGYKNSGIGRENGPEGVEHFTQQKSVLLPM 482 (495)
T ss_dssp HHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC-CCTTSCBCCSGGGEESCBSHHHHHHTTEEEEEEECCT
T ss_pred HHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC-CCCCCCCCCCCCCCcCccchHHHHHHhcceeEEEEcc
Confidence 99999999999999999999999999999999999999987 7789999999999999999999999999999998765
No 12
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=1.8e-106 Score=874.04 Aligned_cols=478 Identities=35% Similarity=0.568 Sum_probs=454.2
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 009035 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (546)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l 140 (546)
.+.+..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (497)
T 3k2w_A 8 LHFKNKVNFIGGQYVPSNESDTIDILSPSTGKVIGEIPAGCKADAENALEVAQAAQK--AWAKLTARTRQNMLRTFANKI 85 (497)
T ss_dssp CCCCTTCEEETTEEECCSSCCEEEEECSSSCSEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHH
T ss_pred ccccccceeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 344556899999999988889999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHH
Q 009035 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLM 219 (546)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (546)
+++.++|++++++|+|||+.+++. |+..+++.++|++.++++..+...+. ..+...++.++|+|||++|+|||||+.+
T Consensus 86 ~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~ 164 (497)
T 3k2w_A 86 RENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLAL 164 (497)
T ss_dssp HTTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSEEEEECCSSSHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCceEEEECCCccHHHH
Confidence 999999999999999999999884 99999999999999988877665443 2456678999999999999999999999
Q ss_pred HHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHH
Q 009035 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (546)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 299 (546)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|+
T Consensus 165 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~G~~i~ 244 (497)
T 3k2w_A 165 AGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTGSTVAGKQIY 244 (497)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred HHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCC
Q 009035 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (546)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p 379 (546)
+.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 245 ~~aa~-~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vg~p 323 (497)
T 3k2w_A 245 KTSAE-YMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDP 323 (497)
T ss_dssp HHHTT-TTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHHHHHHHHTCCBSCT
T ss_pred HHhhh-cCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHHHHHHHHhccCCCC
Confidence 99887 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcc--cCC--CCceecceeeccCCCCCcccccccccceEEEEEe
Q 009035 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER--LGA--KGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455 (546)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~--~~~--~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~ 455 (546)
+++++++||+++.++++++.++|++++++|+++++||.. .+. .|+|++|||+.+++++|++++||+||||++|++|
T Consensus 324 ~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~ 403 (497)
T 3k2w_A 324 MDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKV 403 (497)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCccCcEEEEEEe
Confidence 999999999999999999999999999999999999973 332 6999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeE
Q 009035 456 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 535 (546)
Q Consensus 456 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~ 535 (546)
+|+||||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+|+++||+.|+
T Consensus 404 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~ft~~k~ 483 (497)
T 3k2w_A 404 SSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGEQHQGFHNGWKQSGFGGEDGKFGLEQYLEKKT 483 (497)
T ss_dssp SCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCCCTTSCBCCEETSEESCBSHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCcCCcCCCcCCccchHHHHHHhcceEE
Confidence 99999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred EEEeCCC
Q 009035 536 VVTALKN 542 (546)
Q Consensus 536 v~~~~~~ 542 (546)
|+.+...
T Consensus 484 v~~~~~~ 490 (497)
T 3k2w_A 484 VYINEAE 490 (497)
T ss_dssp EEEECCC
T ss_pred EEEEccc
Confidence 9988654
No 13
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=3.8e-106 Score=870.78 Aligned_cols=475 Identities=60% Similarity=1.011 Sum_probs=451.5
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccC-CCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEG-PWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~-~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||++| .|+.++..+|.++|++++++|+++.+
T Consensus 21 ~~~i~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~~~a~~l~~~~~ 100 (500)
T 1o04_A 21 QIFINNEWHDAVSRKTFPTVNPSTGEVICQVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLNRLADLIERDRT 100 (500)
T ss_dssp SEEETTEEECCTTCCEEEEEETTTTEEEEEEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHHHHHHHHHHTHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHHHHHHHHHHHHH
Confidence 57999999987778899999999999999999999999999999999999732 59999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (546)
+|++++++|+|||+.++...|+..+++.++||+.++++..+...+...+...++.++|+|||++|+|||||+.+.+++++
T Consensus 101 ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~a 180 (500)
T 1o04_A 101 YLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQIIPWNFPLLMQAWKLG 180 (500)
T ss_dssp HHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcEEEECCCCchHHHHHHHHH
Confidence 99999999999999987666999999999999999888776654443445578999999999999999999999999999
Q ss_pred HHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc
Q 009035 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (546)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 305 (546)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.++..
T Consensus 181 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~ 260 (500)
T 1o04_A 181 PALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSS 260 (500)
T ss_dssp HHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEESCHHHHHHHHHHHHHT
T ss_pred HHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhhhhh
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999833
Q ss_pred CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCc
Q 009035 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (546)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~ 385 (546)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|++++
T Consensus 261 ~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~ 340 (500)
T 1o04_A 261 NLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTE 340 (500)
T ss_dssp TCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCS
T ss_pred cCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009035 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 465 (546)
Q Consensus 386 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~ 465 (546)
+||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++
T Consensus 341 ~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~a 420 (500)
T 1o04_A 341 QGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRA 420 (500)
T ss_dssp BCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHH
T ss_pred cCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceEEEEEeeCCHHHHHHHH
Confidence 99999999999999999999999999999997644469999999999999999999999999999999999999999999
Q ss_pred HcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCC
Q 009035 466 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALK 541 (546)
Q Consensus 466 N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~ 541 (546)
|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++|++.|+|+.+..
T Consensus 421 N~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~~G~~gl~~f~~~K~v~~~~~ 496 (500)
T 1o04_A 421 NNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDVFGAQSPFGGYKMSGSGRELGEYGLQAYTEVKTVTVKVP 496 (500)
T ss_dssp HCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSCCCTTSCBCCSGGGEESCBSTGGGGGGGEEEEEEEEECS
T ss_pred hcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcceEEEEEecC
Confidence 9999999999999999999999999999999999987777899999999999999999999999999999988753
No 14
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=1.2e-105 Score=866.43 Aligned_cols=468 Identities=34% Similarity=0.577 Sum_probs=443.1
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 24 ~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~v~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 101 (497)
T 3i44_A 24 NKRKFYINGLWDDPSTPHDLYVIDPSTEEACAVISLGSTRDADKAINAAKKAFQ--TWKTTSPHERLGFVEKILEIYEKR 101 (497)
T ss_dssp EECCEEETTEEECCSSCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred cccCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHH
Confidence 466899999999988888999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeee-eccceeEEEEcCccchHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTL-HEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~-~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
.++|++++++|+|||+.+++..|+..+++.++|++...+.......+. .+...++. ++|+|||++|+|||||+.+.++
T Consensus 102 ~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 180 (497)
T 3i44_A 102 SSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALI-EGNEQAILHYDAIGVVGLITPWNWPMNQVTL 180 (497)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEESS-TTCSSCEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhccccccccc-CCceeEEEeecCceEEEEECCCcchHHHHHH
Confidence 999999999999999999985599999999999998776543322211 23446778 9999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 181 ~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~FTGS~~~G~~i~~~a 260 (497)
T 3i44_A 181 KVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMISFTGSTRAGKDISKNA 260 (497)
T ss_dssp HHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999999
Q ss_pred hhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCC
Q 009035 303 AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (546)
Q Consensus 303 a~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~ 382 (546)
++ ++||+++|||||||+||++||| +.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||+|+
T Consensus 261 a~-~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~ 338 (497)
T 3i44_A 261 SN-TLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQT 338 (497)
T ss_dssp HT-TTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSC
T ss_pred hh-cCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCC
Confidence 87 8999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCc-ccC--CCCceecceeeccCCCCCcccccccccceEEEEEeCCHH
Q 009035 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGE-RLG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 459 (546)
Q Consensus 383 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ 459 (546)
++++||+++.++++++.++|++++++|+++++||. ... ..|+|++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 339 ~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~d 418 (497)
T 3i44_A 339 GNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGPVLSLLPFNTED 418 (497)
T ss_dssp SSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCcccCceEEEEecCCHH
Confidence 99999999999999999999999999999999994 332 379999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
|||+++|+++|||+++|||+|.++++++++++++|+||||. ....+.+||||+|.||+|+++|.+++++||+.|+|+
T Consensus 419 eAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~-~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~t~~K~v~ 495 (497)
T 3i44_A 419 EAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG-HELPGGSYFGGVKFSGRAREGGLWGIKEFLDTKAIS 495 (497)
T ss_dssp HHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT-CCCCTTCCBCCSGGGCCCCBSHHHHHHTTEEEEEES
T ss_pred HHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcceeEEE
Confidence 99999999999999999999999999999999999999995 556788999999999999999999999999999985
No 15
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=2.5e-106 Score=874.86 Aligned_cols=470 Identities=39% Similarity=0.694 Sum_probs=450.9
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (546)
....++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|++++++|++
T Consensus 12 ~~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 89 (517)
T 3r31_A 12 QPKASHFIDGDYVEDNTGTPFESIFPATGEMIAKLHAATPAIVERAIASAKRAQK--EWAAMSPMARGRILKRAADIMRE 89 (517)
T ss_dssp CCSSSEEETTEEECCTTSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHH
T ss_pred ccccCeeECCEEecCCCCCEEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHH
Confidence 3456789999999888889999999999999999999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhH----hcCcccCCCCCCceeeeeccceeEEEEcCccchHH
Q 009035 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADK----IQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLL 218 (546)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~----~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (546)
+.++|++++++|+|||+.++ |+..+++.++|++.++++ +.+...+...+. .++.++|+|||++|+|||||+.
T Consensus 90 ~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P~GVV~~I~PwN~P~~ 165 (517)
T 3r31_A 90 RNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQ 165 (517)
T ss_dssp THHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEECSEEEEECCSSSHHH
T ss_pred HHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcCccEEEEECCCcchHH
Confidence 99999999999999999987 899999999999999988 777665544445 8999999999999999999999
Q ss_pred HHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHH
Q 009035 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (546)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 298 (546)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|
T Consensus 166 ~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 244 (517)
T 3r31_A 166 IACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQG-DRDTGPLLVNHPDVAKVSLTGSVPTGRKV 244 (517)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCC-CTTHHHHHHTCTTEEEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEEC-CHHHHHHHHhCCCcCEEeccCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 88999999999999999999999999999
Q ss_pred HHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCC
Q 009035 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (546)
Q Consensus 299 ~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~ 378 (546)
++.+++ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 245 ~~~aa~-~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 323 (517)
T 3r31_A 245 AAAAAG-HLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGD 323 (517)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHHHHHHHHHHHCCBCC
T ss_pred HHHhhc-CCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHHHHHHHHHHhccCCC
Confidence 999988 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcc-cC---CCCceecceeeccCCCCCcccccccccceEEEEE
Q 009035 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER-LG---AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILK 454 (546)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~-~~---~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~ 454 (546)
|+|+++++||+++.++++++.++|++++++|+++++|| . .+ ..|+|++|||+.+++++|++++||+||||++|++
T Consensus 324 p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~ 402 (517)
T 3r31_A 324 PLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLD 402 (517)
T ss_dssp TTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHHHHSCCSSSEEEEEE
T ss_pred CCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCccccceeeccEEEEEE
Confidence 99999999999999999999999999999999999999 4 22 3799999999999999999999999999999999
Q ss_pred eCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheee
Q 009035 455 YKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 534 (546)
Q Consensus 455 ~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k 534 (546)
|+|+||||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|++|+++||+.|
T Consensus 403 ~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K 482 (517)
T 3r31_A 403 FDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYNLCPVEIPFGGSKQSGFGRENSAAALEHYSELK 482 (517)
T ss_dssp ECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCCCCCTTSCBCCEETTEECCBSTGGGGGGSEEEE
T ss_pred eCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCCCCCCCCCcCCcCcCCCCcCchHHHHHHhhceE
Confidence 99999999999999999999999999999999999999999999998888899999999999999999999999999999
Q ss_pred EEEEeCC
Q 009035 535 AVVTALK 541 (546)
Q Consensus 535 ~v~~~~~ 541 (546)
+|+.+..
T Consensus 483 ~v~~~~~ 489 (517)
T 3r31_A 483 TVYVSTG 489 (517)
T ss_dssp EEEECCC
T ss_pred EEEEcCC
Confidence 9998764
No 16
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.1e-105 Score=868.44 Aligned_cols=472 Identities=38% Similarity=0.698 Sum_probs=449.6
Q ss_pred ccCceecCEeeeCCCCCe-eeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 65 YTQLLINGQFVDSASGKT-FPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~-~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
..++||||+|+.+.++++ ++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 19 ~~~~~i~g~~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 96 (503)
T 1a4s_A 19 DDLNYWGGRRIKSKDGATTEPVFEPATGRVLCQMVPCGAEEVDQAVQSAQAAYL--KWSKMAGIERSRVMLEAARIIRER 96 (503)
T ss_dssp SCCEEETTEEECCCTTCCCEEEECTTTCCEEEEECCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEecCCCCCceEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 346899999998767788 99999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
.++|++++++|+|||+.+++. |+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+.+.+++
T Consensus 97 ~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 175 (503)
T 1a4s_A 97 RDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAGILAWNYPFMIAAWK 175 (503)
T ss_dssp HHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceEEEECCCcchHHHHHHH
Confidence 999999999999999999865 9999999999999999887665443333345789999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ ++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 176 ~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~-~~g~~L~~~p~v~~V~FTGS~~~G~~i~~~aa 254 (503)
T 1a4s_A 176 CAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGA-ETGSLLCHHPNVAKVSFTGSVPTGKKVMEMSA 254 (503)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSH-HHHHHHHHCTTCCEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCc-hHHHHHHhCCCcCEEEEeCCHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999987 89999999999999999999999999999998
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 255 ~-~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 333 (503)
T 1a4s_A 255 K-TVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTE 333 (503)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-cCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccC
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc--C----CCCceecceeeccCCCCCcccccccccceEEEEEeCC
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL--G----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 457 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~--~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~ 457 (546)
+++||+++.++++++.++|++++++|+++++||... . ..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 334 ~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 413 (503)
T 1a4s_A 334 TRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEEIFGPVMSVLPFDT 413 (503)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEECC
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHhccccCceEEEEecCC
Confidence 999999999999999999999999999999999764 2 3699999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+||||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 414 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k~v~ 493 (503)
T 1a4s_A 414 EEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSISPVEVPFGGYKMSGFGRENGQATVDYYSQLKTVI 493 (503)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCCCCTTSCBCCSGGGEECCBSTTGGGGGSEEEEEEE
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhcCceEEE
Confidence 99999999999999999999999999999999999999999998777889999999999999999999999999999998
Q ss_pred EeCC
Q 009035 538 TALK 541 (546)
Q Consensus 538 ~~~~ 541 (546)
.+..
T Consensus 494 ~~~~ 497 (503)
T 1a4s_A 494 VEMG 497 (503)
T ss_dssp ECCS
T ss_pred EccC
Confidence 8653
No 17
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=2.4e-105 Score=863.11 Aligned_cols=471 Identities=37% Similarity=0.650 Sum_probs=452.4
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++.++|.++|+++++.|+++.
T Consensus 9 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 86 (481)
T 3jz4_A 9 RQQALINGEWLDANNGEAIDVTNPANGDKLGSVPKMGADETRAAIDAANRALP--AWRALTAKERATILRNWFNLMMEHQ 86 (481)
T ss_dssp CCSEEETTEEECCTTCCEEEEECTTTCCEEEEEECBCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHHH
Confidence 44689999999988889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
++|++++++|+|||+.+++. |+..+++.++|++.++.+..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 87 ~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 165 (481)
T 3jz4_A 87 DDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRK 165 (481)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCEEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccEEEEECCCcchHHHHHHH
Confidence 99999999999999999875 999999999999999887766654432 3556789999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|.+.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 166 ~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~~~g~~i~~~aa 245 (481)
T 3jz4_A 166 AGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLMEQCA 245 (481)
T ss_dssp HHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHT
T ss_pred HHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999988
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ ++||+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 246 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~ 324 (481)
T 3jz4_A 246 K-DIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNG 324 (481)
T ss_dssp T-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHHHHHHHHhccCCCCccCc
Confidence 7 899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
+++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+
T Consensus 325 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~ 404 (481)
T 3jz4_A 325 VTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIA 404 (481)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEEEEECCHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEEEEECCHHHHHH
Confidence 99999999999999999999999999999999986555789999999999999999999999999999999999999999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|++|+++||+.|+|++.
T Consensus 405 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~t~~k~v~~~ 480 (481)
T 3jz4_A 405 QANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCIG 480 (481)
T ss_dssp HHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCSSSCBCCSGGGEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCcCCcccCcCCCCchHHHHHHhhceeEEEEe
Confidence 9999999999999999999999999999999999999887888999999999999999999999999999999875
No 18
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=1.5e-105 Score=867.23 Aligned_cols=467 Identities=35% Similarity=0.511 Sum_probs=445.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|++++++|+++.
T Consensus 11 ~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 88 (505)
T 3prl_A 11 NANILRNGEWVESRTGERISISAPASGVALGSIPALSQEEVNDAIQGAKDAQK--IWKIRPIHERVDLLYAWADLLEERK 88 (505)
T ss_dssp ECCEEETTEEECCTTCCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 44789999999987889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC--C----CCceeeeeccceeEEEEcCccchHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--G----PYHVQTLHEPIGVAGQIIPWNFPLL 218 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~--~----~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (546)
++|++++++|+|||+.+++. |+..+++.++|++.++++..+...+.. . +...++.++|+|||++|+|||||+.
T Consensus 89 ~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~ 167 (505)
T 3prl_A 89 EIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREPLGVVLAISPFNYPVN 167 (505)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEEEECSEEEEEECSSSTTH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEEcCCcEEEEECCCccHHH
Confidence 99999999999999999886 999999999999999888766543321 1 3457889999999999999999999
Q ss_pred HHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHH
Q 009035 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (546)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 298 (546)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|
T Consensus 168 ~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i 247 (505)
T 3prl_A 168 LAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERI 247 (505)
T ss_dssp HHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred HHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCC
Q 009035 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (546)
Q Consensus 299 ~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~ 378 (546)
++.++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++||
T Consensus 248 ~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~ 324 (505)
T 3prl_A 248 SEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGS 324 (505)
T ss_dssp HHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHHCCBSC
T ss_pred HHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHHHHHHHHHHHHHhcccCC
Confidence 99876 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCH
Q 009035 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 458 (546)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~ 458 (546)
|+ +++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 325 p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~~~ 400 (505)
T 3prl_A 325 PE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKDA 400 (505)
T ss_dssp TT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESSH
T ss_pred CC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhhcCCccCcEEEEEEeCCH
Confidence 99 9999999999999999999999999999999999974 6899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 459 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 459 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~-~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
||||+++|+++|||+++|||+|.++++++++++++|+||||+++. ..+.+||||+|.||+|+++|.+|+++||+.|+|+
T Consensus 401 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~PFGG~k~SG~Gr~~g~~~~~~f~~~k~v~ 480 (505)
T 3prl_A 401 NEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTERGPDHFPFLGVKKSGLGVQGIKPSLLSMTRERVTV 480 (505)
T ss_dssp HHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCCSCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCCCCCCCCCcCCcCcCCCCcCccHHHHHHhhceEEEE
Confidence 999999999999999999999999999999999999999999876 4578999999999999999999999999999998
Q ss_pred EeCC
Q 009035 538 TALK 541 (546)
Q Consensus 538 ~~~~ 541 (546)
++..
T Consensus 481 ~~~~ 484 (505)
T 3prl_A 481 LNLA 484 (505)
T ss_dssp EEC-
T ss_pred EeCC
Confidence 8754
No 19
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=2.6e-105 Score=865.34 Aligned_cols=479 Identities=43% Similarity=0.746 Sum_probs=458.0
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 009035 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (546)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l 140 (546)
++++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|
T Consensus 2 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 79 (490)
T 2ve5_A 2 ARFEEQKLYIGGRYVEASSGATFETINPANGEVLAKVQRASREDVERAVQSAVEGQK--VWAAMTAMQRSRILRRAVDIL 79 (490)
T ss_dssp CCSCCBCEECSSSEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CccccCCeeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHH
Confidence 445567899999999987889999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHH
Q 009035 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (546)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (546)
+++.++|++++++|+|||+.+++..|+..+++.++|++.+++++.+...+...+...++.++|+|||++|+|||||+.+.
T Consensus 80 ~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~pwN~P~~~~ 159 (490)
T 2ve5_A 80 RERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIA 159 (490)
T ss_dssp HHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEEEEECCSSSHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeeEeeccccEEEEECCCcchHHHH
Confidence 99999999999999999999987669999999999999999887766554444567889999999999999999999999
Q ss_pred HHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|.+.++++.|+.||+||+|+||||+.+|+.|++
T Consensus 160 ~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS~~~g~~i~~ 239 (490)
T 2ve5_A 160 LWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMA 239 (490)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999988899999999999999999999999999999
Q ss_pred HH-hhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCC
Q 009035 301 LA-AKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (546)
Q Consensus 301 ~a-a~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p 379 (546)
.+ +. ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|
T Consensus 240 ~a~a~-~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 318 (490)
T 2ve5_A 240 SASSS-SLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDP 318 (490)
T ss_dssp HHHHH-HCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCT
T ss_pred hchhc-cccceEEEcCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCC
Confidence 98 66 79999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC----CCCceecceeeccCCCCCcccccccccceEEEEEe
Q 009035 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG----AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKY 455 (546)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~----~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~ 455 (546)
+|+++++||+++..+++++.++|++++++|+++++||.... ..|+|++|||+.+++++|++++||+||||++|++|
T Consensus 319 ~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPvl~v~~~ 398 (490)
T 2ve5_A 319 QDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIFGPVMSILVY 398 (490)
T ss_dssp TSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCCSSEEEEEEE
T ss_pred CCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceeeCCeEEEEEe
Confidence 99999999999999999999999999999999999997632 36899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeE
Q 009035 456 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 535 (546)
Q Consensus 456 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~ 535 (546)
+|+||||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 399 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~pfGG~k~SG~G~~~G~~~~~~f~~~k~ 478 (490)
T 2ve5_A 399 DDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWGESPAEMPVGGYKQSGVGRENGLTTLAHYTRIKS 478 (490)
T ss_dssp SCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCSCCCTTSCBCCSGGGEESCBSHHHHHHTTEEEEE
T ss_pred CCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCCCCCCCCCcchHHHHHHhheeEE
Confidence 99999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred EEEeCCC
Q 009035 536 VVTALKN 542 (546)
Q Consensus 536 v~~~~~~ 542 (546)
|++++.+
T Consensus 479 v~~~~~~ 485 (490)
T 2ve5_A 479 VQVELGD 485 (490)
T ss_dssp EEEECSC
T ss_pred EEEccCc
Confidence 9988754
No 20
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=4e-105 Score=866.44 Aligned_cols=470 Identities=42% Similarity=0.726 Sum_probs=449.8
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++
T Consensus 28 ~~~i~G~~~~~~~~~~~~~~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 105 (515)
T 2d4e_A 28 LHFIAGEFVPSESGETFPSLDPATNEVLGVAARGGEREVDRAAKAAHEAFQ--RWSRTKAKERKRYLLRIAELIEKHADE 105 (515)
T ss_dssp CEEETTEEECCTTCCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CeeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 579999999877788999999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVG 225 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~ 225 (546)
|++++++|+|||+.+++ .|+..+++.++|++.++++..+...+. ..+...++.++|+|||++|+|||||+.+.+++++
T Consensus 106 la~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~ 184 (515)
T 2d4e_A 106 LAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVGIITPWNAPLMLSTWRIA 184 (515)
T ss_dssp HHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCCEEEECCSSSHHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCceEEECCCCchhhhhhhhhh
Confidence 99999999999999988 599999999999999998877765443 3345678999999999999999999999999999
Q ss_pred HHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc
Q 009035 226 PALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (546)
Q Consensus 226 ~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 305 (546)
+||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+++
T Consensus 185 ~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~I~~~aa~- 263 (515)
T 2d4e_A 185 PALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNAAD- 263 (515)
T ss_dssp HHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHHGG-
T ss_pred HHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeCcHHHHHHHHHHHhh-
Confidence 9999999999999999999999999999999999999999999878899999999999999999999999999999987
Q ss_pred CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCc
Q 009035 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (546)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~ 385 (546)
++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|.|++++
T Consensus 264 ~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~ 343 (515)
T 2d4e_A 264 HLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETE 343 (515)
T ss_dssp GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCS
T ss_pred cCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC--------CCCceecceeeccCCCCCcccccccccceEEEEEeCC
Q 009035 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG--------AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 457 (546)
Q Consensus 386 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~--------~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~ 457 (546)
+||+++.++++++.++|++++++|+++++||.... ..|+|++|||+.+ +++|++++||+||||++|++|+|
T Consensus 344 ~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~eEiFGPVl~v~~~~~ 422 (515)
T 2d4e_A 344 VGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQEEIFGPVLVAIPFKD 422 (515)
T ss_dssp BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHHSCCCSSEEEEEEESS
T ss_pred cCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhhccccCCceEEEeeCC
Confidence 99999999999999999999999999999997643 2699999999999 99999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
+||||+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+++++|++.|+|+
T Consensus 423 ~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~~~~~K~v~ 502 (515)
T 2d4e_A 423 EEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHNVRHLPTPFGGVKGSGDRREGGTYALDFYTDLKTIA 502 (515)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSCCCCTTSCBCCSGGGBCSCBSHHHHHHHHEEEEEEE
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCCCCCCCCCCCCcCCCCCCccchHHHHHHhCceeEEE
Confidence 99999999999999999999999999999999999999999998777889999999999999999999999999999998
Q ss_pred EeCC
Q 009035 538 TALK 541 (546)
Q Consensus 538 ~~~~ 541 (546)
.+..
T Consensus 503 ~~~~ 506 (515)
T 2d4e_A 503 LPLR 506 (515)
T ss_dssp EESS
T ss_pred EcCC
Confidence 8753
No 21
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=3.5e-105 Score=862.34 Aligned_cols=469 Identities=37% Similarity=0.652 Sum_probs=446.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.+ ++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 23 ~~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 99 (495)
T 1wnd_A 23 QHKLLINGELVSGEG-EKQPVYNPATGDVLLEIAEASAEQVDAAVRAADAAFA--EWGQTTPKVRAECLLKLADVIEENG 99 (495)
T ss_dssp CCCEEETTEEECCCS-CEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccCeEECCEEecCCC-CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999998755 8899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
++|++++++|+|||+.+++..|+..+++.++|++.++++..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 100 ~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 179 (495)
T 1wnd_A 100 QVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWK 179 (495)
T ss_dssp HHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCeEEEECCCcchHHHHHHH
Confidence 999999999999999998755899999999999999888766544322 2345688999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+|.+.++++.|++||+||+|+||||+.+|+.|++.++
T Consensus 180 ~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa 258 (495)
T 1wnd_A 180 LAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTA 258 (495)
T ss_dssp HHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHHHHHHHHHHG
T ss_pred HHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 9999999999988889999999999999999999999999999998
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 259 ~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 337 (495)
T 1wnd_A 259 S-SIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDES 337 (495)
T ss_dssp G-GTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTT
T ss_pred h-cCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCC
Confidence 7 799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCC-CeEecCCc-ccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGG-AKLETGGE-RLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~G-a~v~~gg~-~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
+++|||++..+++++.++|++++++| +++++||. .. +.|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 338 ~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deA 416 (495)
T 1wnd_A 338 TELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQV 416 (495)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEEEECCHHHH
T ss_pred CCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhccccCceEEEEEeCCHHHH
Confidence 99999999999999999999999999 99999997 43 36999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+|+++|++.|+|+.+
T Consensus 417 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~f~~~k~v~~~ 494 (495)
T 1wnd_A 417 VNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFMLVSEMPHGGQKLSGYGKDMSLYGLEDYTVVRHVMVK 494 (495)
T ss_dssp HHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCCCCCCCCCCCCCCcCcCCccchHHHHHHhhCeEEEEec
Confidence 999999999999999999999999999999999999999877788999999999999999999999999999999875
No 22
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=7.6e-105 Score=858.84 Aligned_cols=471 Identities=34% Similarity=0.600 Sum_probs=448.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~v~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (479)
T 2imp_A 6 QHPMYIDGQFVTWRGDAWIDVVNPATEAVISRIPDGQAEDARKAIDAAERAQP--EWEALPAIERASWLRKISAGIRERA 83 (479)
T ss_dssp ECCEEETTEEECCCCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999876778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
++|++++++|+|||+.+++ .|+..+++.++|++.++++..+...+.. .+...++.++|+|||++|+|||||+.+.+++
T Consensus 84 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 162 (479)
T 2imp_A 84 SEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFFLIARK 162 (479)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSEEEEECCSSSHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccceEEEECCCchHHHHHHHH
Confidence 9999999999999999987 4999999999999998887766654432 2446789999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|++||+||+|+||||+.+|+.|++.++
T Consensus 163 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa 242 (479)
T 2imp_A 163 MAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIMATAA 242 (479)
T ss_dssp HHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999987789999999999999999999999999999988
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC-C
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK-G 382 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~-~ 382 (546)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+| +
T Consensus 243 ~-~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 321 (479)
T 2imp_A 243 K-NITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERN 321 (479)
T ss_dssp T-TTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCS
T ss_pred c-cCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccC
Confidence 7 8999999999999999999999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHH
Q 009035 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI 462 (546)
Q Consensus 383 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai 462 (546)
++++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||
T Consensus 322 ~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi 401 (479)
T 2imp_A 322 DIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDTLEDAI 401 (479)
T ss_dssp SCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSEEEEEEESSHHHHH
T ss_pred CCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCceEEEEeeCCHHHHH
Confidence 99999999999999999999999999999999997643469999999999999999999999999999999999999999
Q ss_pred HHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 463 QRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 463 ~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
+++|+++|||+++|||+|.++++++++++++|+||||+++..++.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 402 ~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~~~~~~PfGG~k~SG~G~~~g~~~l~~~~~~k~v~~~ 478 (479)
T 2imp_A 402 SMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEAMQGFHAGWRKSGIGGADGKHGLHEYLQTQVVYLQ 478 (479)
T ss_dssp HHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCEETTEESCBSHHHHHHTTEEEEEEEEE
T ss_pred HHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCCCCCCCCCCCCCCCCCCCCchHHHHHHhcCeeEEEec
Confidence 99999999999999999999999999999999999999877788999999999999999999999999999999764
No 23
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=1.1e-104 Score=865.92 Aligned_cols=470 Identities=33% Similarity=0.556 Sum_probs=449.4
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
..++||||+|+. ++++++++||+| |+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++
T Consensus 37 ~~~~~I~G~~~~--~~~~~~~~nP~t~~~~i~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 112 (538)
T 3qan_A 37 EYPLIINGERVT--TEDKIQSWNPARKDQLVGSVSKANQDLAEKAIQSADEAFQ--TWRNVNPEERANILVKAAAIIRRR 112 (538)
T ss_dssp EECEEETTEEEC--CSSEEEEECSSSTTCEEEEEECBCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccceeECCEEec--CCCeEEEECCCCCCcEEEEEcCCCHHHHHHHHHHHHHHHH--hhccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999998 678999999999 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHH-hhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGW-ADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~-a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
.++|++++++|+|||+.+++. |+..+++.++||+.+ .+...+...+...+...++.++|+|||++|+|||||+.+.++
T Consensus 113 ~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~ 191 (538)
T 3qan_A 113 KHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGVTVTISPWNFALAIMVG 191 (538)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCEEEEECCSTTTTHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcEEEEECCCchHHHHHHH
Confidence 999999999999999999986 999999999999998 677777666544466789999999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 192 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~a 271 (538)
T 3qan_A 192 TAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERA 271 (538)
T ss_dssp HHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998889999999999999999999999999999998
Q ss_pred hhcC------CcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhccc
Q 009035 303 AKSN------LKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (546)
Q Consensus 303 a~~~------~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~v 376 (546)
+. + +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 272 a~-~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~v 350 (538)
T 3qan_A 272 AV-VRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTV 350 (538)
T ss_dssp TS-CCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTHHHHHHHHHHHHTTCCB
T ss_pred hh-ccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHHHHHHHHHHHHHHhccC
Confidence 87 5 8999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeC
Q 009035 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (546)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~ 456 (546)
|||+|+++++||+++..+++++.++|++++++| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 351 G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~ 429 (538)
T 3qan_A 351 GDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEIFGPVVAFSKAN 429 (538)
T ss_dssp SCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHHHHSCCCSSEEEEEEES
T ss_pred CCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChhhCCCcCCcEEEEEEeC
Confidence 999999999999999999999999999999999 9999998754579999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEc-CCCCC-CCCCCccCCCCCCCC-CcchHHHHHhhhee
Q 009035 457 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWIN-CFDVF-DAAIPFGGYKQSGQG-REKGSYSLSNYLQV 533 (546)
Q Consensus 457 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN-~~~~~-~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~ 533 (546)
|+||||+++|+++|||+++|||+|.++++++++++++|+|||| +++.. .+.+||||+|.||+| +++|.+||++|++.
T Consensus 430 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~~~PfGG~k~SG~G~~~~G~~gl~~ft~~ 509 (538)
T 3qan_A 430 DFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRNCTGAIVGYHPFGGFKMSGTDSKAGGPDYLALHMQA 509 (538)
T ss_dssp SHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSCSCCCCTTTSCBCCEETTBSCCCBTSTTTGGGGEEE
T ss_pred CHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCCCCCCCCCCCCcCCcCcCCCCcccccHHHHHHhhCe
Confidence 9999999999999999999999999999999999999999999 55554 789999999999999 99999999999999
Q ss_pred eEEEEeCC
Q 009035 534 KAVVTALK 541 (546)
Q Consensus 534 k~v~~~~~ 541 (546)
|+|+++..
T Consensus 510 k~v~~~~~ 517 (538)
T 3qan_A 510 KTVSEMYA 517 (538)
T ss_dssp EEEEEEC-
T ss_pred EEEEEecC
Confidence 99988753
No 24
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=4.5e-105 Score=865.79 Aligned_cols=475 Identities=27% Similarity=0.450 Sum_probs=449.6
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (546)
+...++||||+|+.+.++++++++||+||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 24 m~~~~~~I~G~~~~~~~~~~~~v~nP~tg~~i~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~ 101 (521)
T 4e4g_A 24 MYELGHFIDGKRVAGTSGRVSNIFNPATGEVQGTVALASDADLAAAVESAKAAQP--KWAATNPQRRARVFMKFVQLLND 101 (521)
T ss_dssp CEEECEEETTEEECCSSSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHH
T ss_pred hhccCeeECCEEecCCCCCEEEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHH
Confidence 4556899999999988889999999999999999999999999999999999999 89999999999999999999999
Q ss_pred cHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHH
Q 009035 143 HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFA 221 (546)
Q Consensus 143 ~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~ 221 (546)
+.++|++++++|+|||+.+++. |+..+++.++||+.+++.+.+...+. ..+...++.++|+|||++|+|||||+.+.+
T Consensus 102 ~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~ 180 (521)
T 4e4g_A 102 NMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGIGAGITPFNFPGMIPM 180 (521)
T ss_dssp HHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCEEEEECCSSCTTHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcEEEEECCCcchHHHHH
Confidence 9999999999999999999875 99999999999999888776654332 234567899999999999999999999999
Q ss_pred HHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 222 WKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 222 ~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
+++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|. .+.++.|+.||+||+|+||||+.+|+.|++.
T Consensus 181 ~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~-~~~~~~L~~~p~vd~I~FTGS~~vG~~i~~~ 259 (521)
T 4e4g_A 181 WMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGD-KGAVDAILTHPDIAAVSFVGSTPIARYVYGT 259 (521)
T ss_dssp HHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCC-HHHHHHHHTCTTCCEEEEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCC-hHHHHHHHhCCCcCEEEEECCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999994 5567999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEccc-chHHHHHHHHHhhhhcccCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRVVGDPF 380 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~-v~d~f~~~L~~~~~~~~vG~p~ 380 (546)
+++ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +||+|+++|+++++++++|+|+
T Consensus 260 aa~-~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~ 338 (521)
T 4e4g_A 260 AAM-NGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDKLVPMVESLRIGPYT 338 (521)
T ss_dssp HHH-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHHHTCCBCCTT
T ss_pred Hhh-cCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHHHHHHHHhccCCCCC
Confidence 887 89999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc----CCCCceecceeeccCCCCCcccccccccceEEEEEeC
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL----GAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~----~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~ 456 (546)
++++++||+++.++++++.++|++++++|+++++||... ..+|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 339 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~ 418 (521)
T 4e4g_A 339 DEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFGPVLSVVRAR 418 (521)
T ss_dssp CTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSEEEECCBS
T ss_pred CccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccCcEEEEEEeC
Confidence 999999999999999999999999999999999999752 2479999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhhee
Q 009035 457 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQV 533 (546)
Q Consensus 457 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g--~~~g~~~l~~~~~~ 533 (546)
|+||||+++|+++|||+++|||+|.++++++++++++|+||||++..+ .+.+||||+|.||+| +++|++|+++||+.
T Consensus 419 ~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~k~SG~G~~~~~G~~gl~~ft~~ 498 (521)
T 4e4g_A 419 NYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPIPVPLAYHSFGGWKSSSFGDLNQHGTDSIKFWTRT 498 (521)
T ss_dssp SHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSSCCCCTTSCBCCEETTEESSCCBSHHHHHHHTEEE
T ss_pred CHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCCCCCCCCCCcCCcccCCCCCCccchHHHHHHhheE
Confidence 999999999999999999999999999999999999999999997654 478999999999999 79999999999999
Q ss_pred eEEEEeCCC
Q 009035 534 KAVVTALKN 542 (546)
Q Consensus 534 k~v~~~~~~ 542 (546)
|+|+.+...
T Consensus 499 K~v~~~~~~ 507 (521)
T 4e4g_A 499 KTITSRWPS 507 (521)
T ss_dssp EEEEECCCC
T ss_pred EEEEEecCc
Confidence 999987643
No 25
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=8.1e-104 Score=855.49 Aligned_cols=479 Identities=34% Similarity=0.546 Sum_probs=435.5
Q ss_pred CCCCccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Q 009035 61 VKVDYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLL 140 (546)
Q Consensus 61 ~~~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l 140 (546)
..++..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|
T Consensus 8 ~~~~~~~~~I~G~~~~~~~~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l 85 (508)
T 3r64_A 8 AGIDATKHLIGGQWVEGNSDRISTNINPYDDSVIAESKQASIADVDAAYEAAKKAQA--EWAATPAAERSAIIYRAAELL 85 (508)
T ss_dssp TTBCTTSEEETTEEECCCSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHH
T ss_pred CCccccceeECCEEecCCCCCEEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHH
Confidence 445566899999999888889999999999999999999999999999999999999 899999999999999999999
Q ss_pred HHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC--CCCceeeeeccceeEEEEcCccchHH
Q 009035 141 ERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLL 218 (546)
Q Consensus 141 ~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~ 218 (546)
+++.++|++++++|+|||+.+++. |+..+++.++|++.++++..+ ..+.. .+...++.++|+|||++|+|||||+.
T Consensus 86 ~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 163 (508)
T 3r64_A 86 EEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKGVVGVISPWNFPLN 163 (508)
T ss_dssp HHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECSEEEEECCSSSHHH
T ss_pred HHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecceEEEEECCCcchHH
Confidence 999999999999999999999886 999999999999998887666 44422 34668899999999999999999999
Q ss_pred HHHHHHHHHhhcCCeEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHH
Q 009035 219 MFAWKVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKI 297 (546)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~t~-~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~ 297 (546)
..++++++||++||+||+|||+.+|+++ .+|++++.++|+|+|++|+|+|++.+.++.|+.||+||+|+||||+.+|+.
T Consensus 164 ~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~~~g~~ 243 (508)
T 3r64_A 164 LSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGSTPVGRR 243 (508)
T ss_dssp HHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCHHHHHH
T ss_pred HHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCHHHHHH
Confidence 9999999999999999999999999999 999999999999999999999988899999999999999999999999999
Q ss_pred HHHHHhhc-CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhccc
Q 009035 298 VLQLAAKS-NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV 376 (546)
Q Consensus 298 i~~~aa~~-~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~v 376 (546)
|++.+++. ++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++
T Consensus 244 i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~ 323 (508)
T 3r64_A 244 VGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPT 323 (508)
T ss_dssp HHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHHHHHHHHHHHHTCCB
T ss_pred HHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHHHHHHHHHHHHhccC
Confidence 99988742 58999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeC
Q 009035 377 GDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYK 456 (546)
Q Consensus 377 G~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~ 456 (546)
|+|.++++++||+++.++++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+
T Consensus 324 G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~ 400 (508)
T 3r64_A 324 GDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKAD 400 (508)
T ss_dssp SCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGTSCCCSSEEEEEEES
T ss_pred CCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhcccccCceEEEEEeC
Confidence 999999999999999999999999999999999999999975 68999999999999999999999999999999999
Q ss_pred CHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheeeE
Q 009035 457 DLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 535 (546)
Q Consensus 457 ~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~ 535 (546)
|+||||+++|+++|||+++|||+|.++++++++++++|+||||+++.. .+.+||||+|.||+|+++|.+++++||+.|+
T Consensus 401 ~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~~PfGG~~~SG~Gr~~G~~~l~~ft~~k~ 480 (508)
T 3r64_A 401 DEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVNDEPHVMFGGSKNSGLGRFNGDWAIEEFTTDRW 480 (508)
T ss_dssp SHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC--------------------CCCHHHHHHHTEEEEE
T ss_pred CHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCcCCcCCCCCCcCccHHHHHHhhceEE
Confidence 999999999999999999999999999999999999999999998654 6889999999999999999999999999999
Q ss_pred EEEeC-----CCCCCC
Q 009035 536 VVTAL-----KNPAWL 546 (546)
Q Consensus 536 v~~~~-----~~~~~~ 546 (546)
|+++. .++-||
T Consensus 481 v~~~~~~~~~~~~~~~ 496 (508)
T 3r64_A 481 IGIKRSAENLYFQSHH 496 (508)
T ss_dssp EEEECCSTTCCCC---
T ss_pred EEEecccchhcchhhc
Confidence 99875 345665
No 26
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=6.5e-104 Score=852.09 Aligned_cols=467 Identities=36% Similarity=0.602 Sum_probs=446.4
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHND 145 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~ 145 (546)
.++||||+|+.+. ++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|++|.+
T Consensus 13 ~~~~i~g~~~~~~--~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ 88 (487)
T 2w8n_A 13 TDSFVGGRWLPAA--ATFPVQDPASGAALGMVADCGVREARAAVRAAYEAFC--RWREVSAKERSSLLRKWYNLMIQNKD 88 (487)
T ss_dssp CSEEETTEEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHH
T ss_pred cCeeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999764 7899999999999999999999999999999999999 89999999999999999999999999
Q ss_pred HHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHHHHH
Q 009035 146 EIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKV 224 (546)
Q Consensus 146 ~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l 224 (546)
+|++++++|+|||+.+++. |+..+++.++|++.+++++.+...+. ..+...++.++|+|||++|+|||||+.+.++++
T Consensus 89 ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~ 167 (487)
T 2w8n_A 89 DLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVITPWNFPSAMITRKV 167 (487)
T ss_dssp HHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCEEEEECCSSSTTHHHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceEEEEECCCcchHHHHHHHH
Confidence 9999999999999999885 99999999999999988877665443 234567899999999999999999999999999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEe---CCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVS---GYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~---g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+ |.+.++++.|++||+||+|+||||+.+|+.|++.
T Consensus 168 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~ 247 (487)
T 2w8n_A 168 GAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLVSKISFTGSTTTGKILLHH 247 (487)
T ss_dssp HHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTEEEEEEEECHHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCcCEEEEeCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999 8778899999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhh-cccCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMK-RVVGDPF 380 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~-~~vG~p~ 380 (546)
+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++ +++|+|+
T Consensus 248 aa~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~ 326 (487)
T 2w8n_A 248 AAN-SVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGF 326 (487)
T ss_dssp HHT-TTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHHHHHHHHHHHHHCCBSCTT
T ss_pred Hhc-cCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHHHHHHHHHHHhhcccCCcc
Confidence 987 89999999999999999999999999999999999999999999999999999999999999999999 9999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCc-eecceeeccCCCCCcccccccccceEEEEEeCCHH
Q 009035 381 KGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGY-YIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLD 459 (546)
Q Consensus 381 ~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~-~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ 459 (546)
++++++||+++..+++++.++|++++++|+++++||... ..|+ |++|||+.+++++|++++||+||||++|++|+|+|
T Consensus 327 ~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~~ 405 (487)
T 2w8n_A 327 EEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCTHEETFGPLAPVIKFDTEE 405 (487)
T ss_dssp STTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTTCTTCCSSEEEEEEESCHH
T ss_pred cccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhhhcccccceEEEEEeCCHH
Confidence 999999999999999999999999999999999999753 3689 99999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 460 EVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 460 eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|||+++|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+|+++|.+++++|++.|+|+.+
T Consensus 406 eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~~~SG~G~~~G~~~l~~f~~~k~v~~~ 485 (487)
T 2w8n_A 406 EAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLISSVECPFGGVKQSGLGREGSKYGIDEYLELKYVCYG 485 (487)
T ss_dssp HHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCCCCTTSCBCCSGGGEESCBSTTTGGGGGEEEEEEEEC
T ss_pred HHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCCCCCCCCCCCCCCCCcCCCchHHHHHHhcCccEEEEe
Confidence 99999999999999999999999999999999999999999887778899999999999999999999999999999875
No 27
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=7.5e-104 Score=849.70 Aligned_cols=454 Identities=28% Similarity=0.464 Sum_probs=439.2
Q ss_pred eeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhh
Q 009035 82 TFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQ 161 (546)
Q Consensus 82 ~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 161 (546)
+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||+.+
T Consensus 5 ~~~~~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e 82 (484)
T 3ros_A 5 KYQSVNPYTNEAFASYDNPTSKQIDEAINLAHALYK--KWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSE 82 (484)
T ss_dssp CCEEEETTTTEEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred ccceeCCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHH
Confidence 589999999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred hhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCC
Q 009035 162 SAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQ 241 (546)
Q Consensus 162 a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~ 241 (546)
++ .|+..+++.++|++.++++..+...+...+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.
T Consensus 83 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~ 161 (484)
T 3ros_A 83 SK-EEVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHN 161 (484)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTT
T ss_pred HH-HHHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCC
Confidence 98 49999999999999999888776555445567899999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEE
Q 009035 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (546)
Q Consensus 242 ~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~i 321 (546)
+|+++..|++++.++|+|+|++|+|+|.+.++++ |+.||+||+|+||||+.+|+.|++.+++ ++||+++|||||||+|
T Consensus 162 tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~-~lk~v~lELGGk~p~i 239 (484)
T 3ros_A 162 VPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFI 239 (484)
T ss_dssp CHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCEEEEECCCCCEEE
T ss_pred ChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhc-cCCceEeecCCCCcce
Confidence 9999999999999999999999999998888888 9999999999999999999999999987 8999999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHH
Q 009035 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKY 401 (546)
Q Consensus 322 V~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~ 401 (546)
|++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+|+|+++++||+++.++++++.++
T Consensus 240 V~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~ 319 (484)
T 3ros_A 240 VLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQ 319 (484)
T ss_dssp ECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCH
Q 009035 402 IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNL 481 (546)
Q Consensus 402 i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~ 481 (546)
|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.
T Consensus 320 i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~ 399 (484)
T 3ros_A 320 VKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDI 399 (484)
T ss_dssp HHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCH
T ss_pred HHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCH
Confidence 99999999999999987667899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 482 DTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 482 ~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
++++++++++++|+||||+++...+.+||||+|.||+|+++|++||++||+.|+|+++.
T Consensus 400 ~~a~~~~~~l~aG~V~vN~~~~~~~~~PfGG~k~SG~Gr~~G~~gl~~ft~~K~v~~~~ 458 (484)
T 3ros_A 400 DRAKKVSAQIETGMTVINGRWITSGELPFGGIKKSGYGRELSGLGLMAFVNEHLVIDVT 458 (484)
T ss_dssp HHHHHHHHHSCSSCCEETSCCCCCTTSCBCCSGGGEESCBSHHHHHTTTCEEEEEEECG
T ss_pred HHHHHHHHhCccceEEECCCCCCCCCCCcCCcCcccCCcCchHHHHHHhheeEEEEECC
Confidence 99999999999999999998888899999999999999999999999999999999875
No 28
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=1.9e-103 Score=847.02 Aligned_cols=458 Identities=31% Similarity=0.551 Sum_probs=432.8
Q ss_pred ceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHH
Q 009035 68 LLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEI 147 (546)
Q Consensus 68 ~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~l 147 (546)
+||||+|+.+ ++ ++++||+||+++++++.++.+|+++|+++|++||. .|+.++..+|.++|++++++|+++.++|
T Consensus 2 ~~I~G~~~~~--~~-~~~~nP~tg~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~el 76 (486)
T 3pqa_A 2 MFIDGKWINR--ED-MDVINPYSLEVIKKIPALSREEAKEAIDTAEKYKE--VMKNLPITKRYNILMNIAKQIKEKKEEL 76 (486)
T ss_dssp -------CCC--CC-EEEECTTTCCEEEEECCCCHHHHHHHHHHHHHTHH--HHHTCCHHHHHHHHHHHHHHHHHTHHHH
T ss_pred eeECCEEecC--CC-eEEECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999975 56 99999999999999999999999999999999999 8999999999999999999999999999
Q ss_pred HHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHH
Q 009035 148 AALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPA 227 (546)
Q Consensus 148 a~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~A 227 (546)
++++++|+|||+.+++. |+..+++.++|++.+++++.+...+.+ +...++.++|+|||++|+|||||+.+.++++++|
T Consensus 77 a~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~-~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~A 154 (486)
T 3pqa_A 77 AKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGAITPFNFPLNLSAHKIAPA 154 (486)
T ss_dssp HHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECCT-TEEEEEEEEECSEEEEEECSSSHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecCC-CceeEEEEccccEEEEECCCchHHHHHHHHHHHH
Confidence 99999999999999875 999999999999999988776655543 5678899999999999999999999999999999
Q ss_pred hhcCCeEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 228 LACGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 228 LaaGN~VVlkps~~~p~t~~~l~~~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
|++||+||+|||+.+|+++.+|++++.++ |+|+|++|+|+|++.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 155 LaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS~~~g~~i~~~aa 234 (486)
T 3pqa_A 155 IATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG 234 (486)
T ss_dssp HHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESCHHHHHHHHHHCC
T ss_pred HHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECChHHHHHHHHHcC
Confidence 99999999999999999999999999999 99999999999988889999999999999999999999999998876
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+||+++|||||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 235 ---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 311 (486)
T 3pqa_A 235 ---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEK 311 (486)
T ss_dssp ---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred ---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCC
Confidence 79999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
+++||+++.++++++.++|++++++|+++++||.. .|+|++|||+ +++++|++++||+||||++|++|+| ||||+
T Consensus 312 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~ 386 (486)
T 3pqa_A 312 TDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTETFAPVIPIIRTNE-EEMID 386 (486)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTCCCCSSEEEEEEECH-HHHHH
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcccccccEEEEEEEcH-HHHHH
Confidence 99999999999999999999999999999999975 5899999999 9999999999999999999999999 99999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
++|+++|||+++|||+|.++++++++++++|+||||+++.+ .+.+||||+|.||+|+++|.+||++||+.|+|+++.
T Consensus 387 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~Gr~~g~~gl~~f~~~k~v~~~~ 464 (486)
T 3pqa_A 387 IANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSLFRQDNMPFGGVKKSGLGREGVKYAMEEMSNIKTIIISK 464 (486)
T ss_dssp HHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTTCCCTTSCBCCSGGGEESCBSHHHHHHHTEEEEEEEEEC
T ss_pred HHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCCcCCCCCCCCCcCcCcCCCCCcHHHHHHhhceEEEEEcC
Confidence 99999999999999999999999999999999999998653 358999999999999999999999999999998875
No 29
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2e-103 Score=849.54 Aligned_cols=471 Identities=30% Similarity=0.495 Sum_probs=427.9
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.
T Consensus 6 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (485)
T 4dng_A 6 LNKSFINGKWTGGESGRTEDILNPYDQSVITTASLATGKQLEDAFDIAQKAQK--EWAKSTTEDRKAVLQKARGYLHENR 83 (485)
T ss_dssp CCSEEETTEEECCSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCCCCeEEeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HhCcCCHHHHHHHHHHHHHHHHHHH
Confidence 45789999999887889999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC--CCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD--GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~--~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
++|++++++|+|||+.+++. |+..+++.++|++.+++++.+...+.. .+...++.++|+|||++|+|||||+...++
T Consensus 84 ~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 162 (485)
T 4dng_A 84 DDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVISSISPFNFPMNLSMR 162 (485)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECCEEEEECCSSSHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecceEEEEECCCccHHHHHHH
Confidence 99999999999999999987 999999999999999988777655432 346688999999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHH-HHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSA-LYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQL 301 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~-~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~ 301 (546)
++++||++||+||+|||+.+|+++ .+|++++.++|+|+|++|+++|++.++++.|+.||+||+|+||||+.+|+.|++.
T Consensus 163 ~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTGS~~~g~~i~~~ 242 (485)
T 4dng_A 163 SIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEI 242 (485)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEECCcHHHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999888899999999999999999999999999999
Q ss_pred HhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCC
Q 009035 302 AAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFK 381 (546)
Q Consensus 302 aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~ 381 (546)
+++ ++||+++|||||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.|
T Consensus 243 aa~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~~~~ 321 (485)
T 4dng_A 243 AGR-AFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTD 321 (485)
T ss_dssp HHH-HTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTS
T ss_pred Hhh-hccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHHHHHHHHHHhccCCCCCc
Confidence 987 7899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 382 GGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 382 ~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
+++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 322 ~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~v~~~~~~~eA 398 (485)
T 4dng_A 322 PKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELFAPIATIIKAGSDQEA 398 (485)
T ss_dssp TTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCCCCSSEEEEEEESSHHHH
T ss_pred CCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCccccceEEEEEeCCHHHH
Confidence 9999999999999999999999999999999999975 6899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||+++.. .+.+||||+|.||+|+++|.+++++||+.|+|+++.
T Consensus 399 i~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~~~SG~G~~~g~~~l~~~t~~k~v~~~~ 478 (485)
T 4dng_A 399 IDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVNDSPNIAFGGNKASGVGRFGNPWVVEEFTVTKWISIQK 478 (485)
T ss_dssp HHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC----------------------CHHHHHHHEEEEEEEEEC
T ss_pred HHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCCCCCCCCcCCcCCCCCCccchHHHHHHhhceEEEEEec
Confidence 9999999999999999999999999999999999999998654 688999999999999999999999999999998876
Q ss_pred CC
Q 009035 541 KN 542 (546)
Q Consensus 541 ~~ 542 (546)
..
T Consensus 479 ~~ 480 (485)
T 4dng_A 479 QY 480 (485)
T ss_dssp --
T ss_pred CC
Confidence 43
No 30
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=4.9e-103 Score=843.91 Aligned_cols=464 Identities=32% Similarity=0.492 Sum_probs=440.7
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.+ +++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.
T Consensus 4 ~~~~~i~g~~~~~~~--~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 79 (475)
T 1euh_A 4 QYKNYVNGEWKLSEN--EIKIYEPASGAELGSVPAMSTEEVDYVYASAKKAQP--AWRALSYIERAAYLHKVADILMRDK 79 (475)
T ss_dssp BCCEEETTEEECCSS--EEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCCC--ceEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 347899999998644 899999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CC----Cce-eeeeccceeEEEEcCccchHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GP----YHV-QTLHEPIGVAGQIIPWNFPLL 218 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~----~~~-~~~~~P~GVv~~i~p~n~P~~ 218 (546)
++|++++++|+|||+.+++. |+..+++.++|++.++++..+...+.. .+ ... ++.++|+|||++|+|||||+.
T Consensus 80 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~ 158 (475)
T 1euh_A 80 EKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPVGLVLAISPFNYPVN 158 (475)
T ss_dssp HHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEEEECSEEEEECCTTSTTH
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEEeccceEEEECCCCchHH
Confidence 99999999999999999864 999999999999999887665543322 23 355 899999999999999999999
Q ss_pred HHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHH
Q 009035 219 MFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (546)
Q Consensus 219 ~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 298 (546)
+.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|
T Consensus 159 ~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTGS~~~g~~i 238 (475)
T 1euh_A 159 LAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERI 238 (475)
T ss_dssp HHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEEEESCHHHHHHH
T ss_pred HHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEEEECchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999878899999999999999999999999999
Q ss_pred HHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCC
Q 009035 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (546)
Q Consensus 299 ~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~ 378 (546)
++.++ +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 239 ~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~ 315 (475)
T 1euh_A 239 GKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGN 315 (475)
T ss_dssp HHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHHHHHHHHHHHHHTSCBSC
T ss_pred HHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHHHHHHHHHHHHHhccCCC
Confidence 99876 799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCH
Q 009035 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 458 (546)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~ 458 (546)
|++ ++++||+++..+++++.++|++++++|+++++||.. .|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 316 p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~ 391 (475)
T 1euh_A 316 PED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEEPFGPVLPIIRVTSV 391 (475)
T ss_dssp GGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGGTSCCCSSEEEEEEESCH
T ss_pred ccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHHcCccccceEEEEecCCH
Confidence 999 999999999999999999999999999999999975 5899999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcC-CCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 459 DEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINC-FDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 459 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~-~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
||||+++|+++|||+++|||+|.++++++++++++|+||||+ +....+.+||||+|.||+|+++|.+|+++|++.|+|+
T Consensus 392 ~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~~~~~~~pfGG~k~SG~G~~~g~~~~~~~~~~k~v~ 471 (475)
T 1euh_A 392 EEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQRGTDNFPFLGAKKSGAGIQGVKYSIEAMTTVKSVV 471 (475)
T ss_dssp HHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCCCSTTSCBCCEETTEESCBSHHHHHHHTEEEEEEE
T ss_pred HHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCCCCCCCCCcCCCCCCCcCCCccHHHHHHhCCeeEEE
Confidence 999999999999999999999999999999999999999999 6666789999999999999999999999999999998
Q ss_pred EeC
Q 009035 538 TAL 540 (546)
Q Consensus 538 ~~~ 540 (546)
.+.
T Consensus 472 ~~~ 474 (475)
T 1euh_A 472 FDI 474 (475)
T ss_dssp EEC
T ss_pred Eec
Confidence 764
No 31
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=7.4e-103 Score=844.22 Aligned_cols=474 Identities=31% Similarity=0.495 Sum_probs=447.1
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.+|..+|.++|++++++|+++.
T Consensus 5 ~~~~~i~g~~~~~~~~~~~~~~~P~t~~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 82 (486)
T 1t90_A 5 KLKNYINGEWVESKTDQYEDVVNPATKEVLCQVPISTKEDIDYAAQTAAEAFK--TWSKVAVPRRARILFNFQQLLSQHK 82 (486)
T ss_dssp BCCEEETTEEECCSCSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHTTH
T ss_pred ccceeECCEEecCCCCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999999877778999999999999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccC-CCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP-ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~-~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
++|++++++|+|||+.+++ .|+..+++.++|++.+.+.+.+...+ ...+...++.++|+|||++|+|||||+.+.+++
T Consensus 83 ~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~ 161 (486)
T 1t90_A 83 EELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWM 161 (486)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSEEEEECCSSCTTHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCEEEEECCCchhHHHHHHH
Confidence 9999999999999999887 49999999999999887777665433 123445688999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+| +.+.+..|++||+||+|+||||+.+|+.|++.++
T Consensus 162 ~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~I~fTGS~~~g~~i~~~aa 240 (486)
T 1t90_A 162 FPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYG-AHDVVNGILEHPEIKAISFVGSKPVGEYVYKKGS 240 (486)
T ss_dssp HHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCC-SHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEEC-CHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 5678999999999999999999999999999988
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCe-EEEcccchHHHHHHHHHhhhhcccCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSR-TFVHESVYDQFVEKANALAMKRVVGDPFKG 382 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~-v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~ 382 (546)
+ ++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ ||+|+++|+++++++++|+|+++
T Consensus 241 ~-~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~~~vG~~~~~ 318 (486)
T 1t90_A 241 E-NLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAKLQEKVADIKIGNGLDD 318 (486)
T ss_dssp H-TTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTTCCBSCTTST
T ss_pred c-cCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHhcccCCCCcc
Confidence 7 89999999999999999999999999999999999999999999999 999999 99999999999999999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC-CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHH
Q 009035 383 GIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEV 461 (546)
Q Consensus 383 ~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~ea 461 (546)
++++||+++..+++++.++|++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+|||
T Consensus 319 ~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v~~~~~~~ea 398 (486)
T 1t90_A 319 GVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEA 398 (486)
T ss_dssp TCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHH
T ss_pred CCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEEEEeCCHHHH
Confidence 99999999999999999999999999999999997432 36899999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC-CCCCCccCCCCCCCC--CcchHHHHHhhheeeEEEE
Q 009035 462 IQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF-DAAIPFGGYKQSGQG--REKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 462 i~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~-~~~~pfgG~k~SG~g--~~~g~~~l~~~~~~k~v~~ 538 (546)
|+++|+++|||+++|||+|.++++++++++++|+||||++... ++.+||||+|.||+| +++|.+|+++|++.|+|+.
T Consensus 399 i~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~k~SG~G~~~~~g~~g~~~~~~~k~v~~ 478 (486)
T 1t90_A 399 IEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGVPAPMAFFPFSGWKSSFFGTLHANGKDSVDFYTRKKVVTA 478 (486)
T ss_dssp HHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSCCCCCTTSCCCCEETTEESSSCSSHHHHHHHTEEEEEEEE
T ss_pred HHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCCCCCCCCCCcCCCCcCCCCCCccchHHHHHHhhceEEEEE
Confidence 9999999999999999999999999999999999999986443 478999999999999 8999999999999999998
Q ss_pred eCCCCC
Q 009035 539 ALKNPA 544 (546)
Q Consensus 539 ~~~~~~ 544 (546)
+..+|.
T Consensus 479 ~~~~~~ 484 (486)
T 1t90_A 479 RYPAPD 484 (486)
T ss_dssp ECCCCC
T ss_pred ecCCCC
Confidence 876664
No 32
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1e-102 Score=845.38 Aligned_cols=470 Identities=27% Similarity=0.481 Sum_probs=442.6
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
..+++||||+|+. ++++++++||+||+++++++.++.+|+++++++|++||. .|+.++..+|.++|++++++|+++
T Consensus 22 ~~~~~~i~g~~~~--~~~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 97 (500)
T 2j6l_A 22 EENEGVYNGSWGG--RGEVITTYCPANNEPIARVRQASVADYEETVKKAREAWK--IWADIPAPKRGEIVRQIGDALREK 97 (500)
T ss_dssp SEEECEESSSEEC--CSCEEEEEETTTTEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCceECCEEec--CCCeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHH
Confidence 3568899999994 568999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCC-CCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD-GPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~-~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
.++|++++++|+|||+.++. .|+..+++.++|++.+++++.+...+.. .+...++.++|+|||++|+|||||+.+.++
T Consensus 98 ~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 176 (500)
T 2j6l_A 98 IQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVGIITAFNFPVAVYGW 176 (500)
T ss_dssp HHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccEEEEECCCcchhhHHHH
Confidence 99999999999999999985 5999999999999998887766554432 234467889999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHH----HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLH----EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIV 298 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~----~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i 298 (546)
++++||++||+||+|||+.+|+++..+++++. ++|+|+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|
T Consensus 177 ~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g-~~~~g~~L~~~~~vd~I~FTGS~~~g~~i 255 (500)
T 2j6l_A 177 NNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCG-GADIGTAMAKDERVNLLSFTGSTQVGKQV 255 (500)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECC-SHHHHHHHHHCTTCSEEEEESCHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeC-CHHHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence 99999999999999999999999999988876 46999999999999 78899999999999999999999999999
Q ss_pred HHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCC
Q 009035 299 LQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGD 378 (546)
Q Consensus 299 ~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~ 378 (546)
++.+++ ++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|+
T Consensus 256 ~~~aa~-~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~ 334 (500)
T 2j6l_A 256 GLMVQE-RFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGN 334 (500)
T ss_dssp HHHHHH-TTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHHHHHHHHHHHTCCBSC
T ss_pred HHHhcc-CCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHHHHHHHHHhhhcccCC
Confidence 999987 8999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCH
Q 009035 379 PFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDL 458 (546)
Q Consensus 379 p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~ 458 (546)
|.++++++|||++..+++++.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+
T Consensus 335 p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~ 414 (500)
T 2j6l_A 335 PWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTETFAPILYVFKFQNE 414 (500)
T ss_dssp TTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHSCCSSSEEEEEEECCH
T ss_pred cccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcCcccCceEEEEeeCCH
Confidence 99999999999999999999999999999999999999865457999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCceEEEEcCCHHHHHHHH--HHhceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhheeeE
Q 009035 459 DEVIQRSNASQYGLAAGVFTHNLDTANTLM--RALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKA 535 (546)
Q Consensus 459 ~eai~~~N~~~~gL~a~v~t~d~~~a~~~~--~~l~~g~V~iN~~~~-~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~ 535 (546)
||||+++|+++|||+++|||+|.+++++++ +++++|+||||++.. ..+.+||||+|.||+|+++|.+++++|++.|+
T Consensus 415 deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~ 494 (500)
T 2j6l_A 415 EEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPTSGAEIGGAFGGEKHTGGGRESGSDAWKQYMRRST 494 (500)
T ss_dssp HHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCTTCCCTTSEECCSGGGCSCCEESTTGGGGGEEEEE
T ss_pred HHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCCccCCCCCCcCCcCCCCCCCcchHHHHHHhhceEE
Confidence 999999999999999999999999999999 779999999998654 34689999999999999999999999999999
Q ss_pred EEEeC
Q 009035 536 VVTAL 540 (546)
Q Consensus 536 v~~~~ 540 (546)
|+++.
T Consensus 495 v~~~~ 499 (500)
T 2j6l_A 495 CTINY 499 (500)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 98753
No 33
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=4.8e-103 Score=847.49 Aligned_cols=470 Identities=30% Similarity=0.444 Sum_probs=444.7
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
..++||||+|+.+. .+++++||+||+++++++.++.+|+++|+++|++||+. .|+.++..+|.++|++++++|+++.
T Consensus 18 ~~~~~i~g~~~~~~--~~~~v~nP~tg~~i~~~~~~~~~~v~~av~~A~~A~~~-~w~~~~~~~R~~~L~~~a~~l~~~~ 94 (501)
T 1uxt_A 18 VYPSYLAGEWGGSG--QEIEVKSPIDLATIAKVISPSREEVERTLDVLFKRGRW-SARDMPGTERLAVLRKAADIIERNL 94 (501)
T ss_dssp EECEECSSSEECCS--CEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHTHHH-HHHTSCHHHHHHHHHHHHHHHHHTH
T ss_pred ccceeECCEEecCC--CeEEEECCCCCCEEEEEeCCCHHHHHHHHHHHHHHhhh-hhccCCHHHHHHHHHHHHHHHHHhH
Confidence 45689999999863 78999999999999999999999999999999999872 3999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC---CC--CCceeeeeccceeEEEEcCccchHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA---DG--PYHVQTLHEPIGVAGQIIPWNFPLLM 219 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~---~~--~~~~~~~~~P~GVv~~i~p~n~P~~~ 219 (546)
++|++++++|+|||+.+++ .|+..+++.++|++.++++..+...+. .. +...++.++|+|||++|+|||||+.+
T Consensus 95 ~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~ 173 (501)
T 1uxt_A 95 DVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPLGVVAAITPFNYPLFD 173 (501)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEEECSEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEeeccEEEEECCCccHHHH
Confidence 9999999999999999988 599999999999999988876655443 22 33678999999999999999999999
Q ss_pred HHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHH
Q 009035 220 FAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVL 299 (546)
Q Consensus 220 ~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~ 299 (546)
.++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+ ++++.|+.||+||+|+||||+.+|+.|+
T Consensus 174 ~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~-~~g~~L~~~~~vd~I~FTGS~~~G~~i~ 252 (501)
T 1uxt_A 174 AVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPG-KEAEKIVADDRVAAVSFTGSTEVGERVV 252 (501)
T ss_dssp HHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCH-HHHHHHHTCTTCCEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCc-HHHHHHHhCCCcCEEEEeCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999977 8999999999999999999999999999
Q ss_pred HHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCC
Q 009035 300 QLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDP 379 (546)
Q Consensus 300 ~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p 379 (546)
+.++ +||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|||
T Consensus 253 ~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p 329 (501)
T 1uxt_A 253 KVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDP 329 (501)
T ss_dssp HHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCT
T ss_pred HhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHHHHHHHHHHHhccCCCc
Confidence 9876 7999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCC-ceecceeeccCC---CCCcccccccccceEEEEEe
Q 009035 380 FKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG-YYIKPTVFTGVK---DDMLIAKDEIFGPVQSILKY 455 (546)
Q Consensus 380 ~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g-~~~~Ptv~~~v~---~~~~i~~eE~fgPvl~v~~~ 455 (546)
+|+++++||+++.++++++.++|++++++|+++++||.. .| +|++|||+.+++ ++|++++||+||||++|++|
T Consensus 330 ~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFGPVl~v~~~ 406 (501)
T 1uxt_A 330 RDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMVLYKREVFAPVALAVEV 406 (501)
T ss_dssp TSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSHHHHSCCCSSEEEEEEE
T ss_pred cccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCHHHhCcccCceEEEEee
Confidence 999999999999999999999999999999999999975 58 999999999999 99999999999999999999
Q ss_pred CCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCC-CCCCCCCCccCCCCCCCCCcchHHHHHhhheee
Q 009035 456 KDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCF-DVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVK 534 (546)
Q Consensus 456 ~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~-~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k 534 (546)
+|+||||+++|+++|||+++|||+|.++++++++++++|+||||++ +...+.+||||+|.||+|+++|.+++++|++.|
T Consensus 407 ~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~~~~~~~PfGG~k~SG~G~~~G~~~l~~f~~~k 486 (501)
T 1uxt_A 407 KDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHGIGYYPFGGRKKSGVFREGIGYAVEAVTAYK 486 (501)
T ss_dssp SSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCTTSSSCBCCEETTEESCBSTTTTHHHHEEEE
T ss_pred CCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCCCCCCCCCCCCCcCCCCCCccChHHHHHHhCcee
Confidence 9999999999999999999999999999999999999999999998 667789999999999999999999999999999
Q ss_pred EEEEeCC-CCCC
Q 009035 535 AVVTALK-NPAW 545 (546)
Q Consensus 535 ~v~~~~~-~~~~ 545 (546)
+|+.+.. .+.|
T Consensus 487 ~v~~~~~~~~~~ 498 (501)
T 1uxt_A 487 TIVFNYKGKGVW 498 (501)
T ss_dssp EEEEECTTSSSS
T ss_pred EEEEecCCCccc
Confidence 9988763 3444
No 34
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=3.2e-103 Score=846.47 Aligned_cols=467 Identities=37% Similarity=0.637 Sum_probs=423.2
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
...++||||+|+.+.++++++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++
T Consensus 6 ~~~~~~i~G~~~~~~~~~~~~~~~P~tg~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~ 83 (478)
T 3ty7_A 6 DYTKQYINGEWVESNSNETIEVINPATEEVIGKVAKGNKADVDKAVEAADDVYL--EFRHTSVKERQALLDKIVKEYENR 83 (478)
T ss_dssp ECCEEEETTEEEECSSSCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhhheECCEEecCCCCCeEEeECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHh
Confidence 356789999999988889999999999999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWK 223 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~ 223 (546)
.++|++++++|+|||+.+++..|+..+++.++|++.++++..+... +...++.++|+|||++|+|||||+...+++
T Consensus 84 ~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~----~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~ 159 (478)
T 3ty7_A 84 KDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEER----RGDDLVVKEAIGVSGLITPWNFPTNQTSLK 159 (478)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEE----ETTEEEEEEECCCEEEECCSSSTTHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhcccC----CccceEEecCceEEEEECCCcchHHHHHHH
Confidence 9999999999999999998556999999999999999887765432 235788999999999999999999999999
Q ss_pred HHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHh
Q 009035 224 VGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAA 303 (546)
Q Consensus 224 l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa 303 (546)
+++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 160 ~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~fTGS~~~G~~i~~~aa 239 (478)
T 3ty7_A 160 LAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKAA 239 (478)
T ss_dssp HHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEEECSCHHHHCC--CSTT
T ss_pred HHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEEEECcHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999888
Q ss_pred hcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCC
Q 009035 304 KSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGG 383 (546)
Q Consensus 304 ~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~ 383 (546)
+ +++|+++|+|||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|+|++
T Consensus 240 ~-~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~ 318 (478)
T 3ty7_A 240 K-DFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDG 318 (478)
T ss_dssp T-TTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTT
T ss_pred h-cCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCC
Confidence 7 789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcc-cC--CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGER-LG--AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDE 460 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~-~~--~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~e 460 (546)
+++||+++.++++++.++|++++++|+++++||.. .. ..|+|++|||+.+++++|++++||+||||++|++|+|+||
T Consensus 319 ~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPvl~v~~~~~~~e 398 (478)
T 3ty7_A 319 TQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIFGPVMSVITYNDLDE 398 (478)
T ss_dssp CCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHH
T ss_pred CccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCceeECceeEEEecCCHHH
Confidence 99999999999999999999999999999999943 22 4799999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEE
Q 009035 461 VIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVT 538 (546)
Q Consensus 461 ai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~ 538 (546)
||+++|+++|||+++|||+|.++++++++++++|+||||+ +...+.+||||+|.||+|+++|.+++++||+.|+|+.
T Consensus 399 Ai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~-~~~~~~~PfGG~k~SG~G~~~G~~~l~~~t~~k~v~~ 475 (478)
T 3ty7_A 399 AIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINE-AGRKPDLPFGGYKQSGLGREWGDYGIEEFLEVKSIAG 475 (478)
T ss_dssp HHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETT-CC----------------------CCGGGEEEEEEET
T ss_pred HHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECC-CCCCCCCCcCCcCcCcCCccchHHHHHHhcCeEEEEE
Confidence 9999999999999999999999999999999999999999 6667889999999999999999999999999999873
No 35
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=5.8e-102 Score=842.50 Aligned_cols=467 Identities=33% Similarity=0.545 Sum_probs=440.4
Q ss_pred cCceecCEeeeCCCCCeeeeecCC-CCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPR-TGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~-tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
.++||||+|+.+ +.+++++||+ ||+++++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.
T Consensus 38 ~~~~i~G~~~~~--~~~~~~~nP~~t~~~i~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 113 (516)
T 1uzb_A 38 YPLYIGGEWVDT--KERMVSLNPSAPSEVVGTTAKAGKAEAEAALEAAWKAFK--TWKDWPQEDRSRLLLKAAALMRRRK 113 (516)
T ss_dssp ECEEETTEEECC--SSEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTH
T ss_pred cceeECCEEecC--CCeEEEECCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHH
Confidence 368999999963 5789999999 6999999999999999999999999999 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccC--CCCCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAP--ADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~--~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
++|++++++|+|||+.+++ .|+..+++.++||+.+++++.+...+ ...+...++.++|+|||++|+|||||+.+.++
T Consensus 114 ~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~ 192 (516)
T 1uzb_A 114 RELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAGVVIAPWNFPVAIFTG 192 (516)
T ss_dssp HHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECCEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccceEEEECCCccHHHHHHH
Confidence 9999999999999999987 49999999999999999888775432 22244568899999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+|+|.+.++++.|+.||+||+|+||||+.+|+.|++.+
T Consensus 193 ~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~I~FTGS~~~G~~i~~~a 272 (516)
T 1uzb_A 193 MIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAA 272 (516)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCEEEecCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999998888999999999999999999999999999998
Q ss_pred hh-----cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccC
Q 009035 303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (546)
Q Consensus 303 a~-----~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG 377 (546)
+. .++||+++|||||||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|+++++++++|
T Consensus 273 a~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G 352 (516)
T 1uzb_A 273 GRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG 352 (516)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHTTCCBS
T ss_pred hhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHHHHHHHHHHHHHHhccCC
Confidence 71 3799999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCC
Q 009035 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 457 (546)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~ 457 (546)
+| ++++++|||++..+++++.++|++++++| ++++||......|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 353 ~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~ 430 (516)
T 1uzb_A 353 PA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLSVIRVKD 430 (516)
T ss_dssp CG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHhhhccccCceEEEEEeCC
Confidence 99 99999999999999999999999999999 89999975334699999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhhheee
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVK 534 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~--~~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k 534 (546)
+||||+++|+++|||+++|||+|.++++++++++++|+||||+++. ..+.+||||+|.||+| +++|.+++++|++.|
T Consensus 431 ~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~~~~~~~~~PfGG~k~SG~G~~~~g~~~l~~f~~~k 510 (516)
T 1uzb_A 431 FAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITGALVGVQPFGGFKLSGTNAKTGALDYLRLFLEMK 510 (516)
T ss_dssp HHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCSGGGBSCCCBTSHHHHHTTEEEE
T ss_pred HHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCCCCCCCCCCCCCCcCcCCCCCccchHHHHHHcCCee
Confidence 9999999999999999999999999999999999999999998643 3578999999999999 589999999999999
Q ss_pred EEEEe
Q 009035 535 AVVTA 539 (546)
Q Consensus 535 ~v~~~ 539 (546)
+|+.+
T Consensus 511 ~v~~~ 515 (516)
T 1uzb_A 511 AVAER 515 (516)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99875
No 36
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=9.3e-101 Score=824.36 Aligned_cols=457 Identities=30% Similarity=0.485 Sum_probs=437.1
Q ss_pred CCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCC
Q 009035 79 SGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKP 158 (546)
Q Consensus 79 ~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 158 (546)
+..+++++||+||++|++++.++.+|+++++++|++||. .|+.++..+|.++|+++++.|+++.++|++++++|+|||
T Consensus 5 s~~~~~~~~P~t~~~i~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~ 82 (462)
T 3etf_A 5 TATQALSVNPATGQTLAAMPWANAQEIEHALSLAASGFK--KWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKP 82 (462)
T ss_dssp -CCCSEEECTTTCCEEEECCCCCHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCC
T ss_pred ccCccceECCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 457799999999999999999999999999999999999 899999999999999999999999999999999999999
Q ss_pred hhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEec
Q 009035 159 FEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKT 238 (546)
Q Consensus 159 ~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkp 238 (546)
+.+++. |+..+++.++|++.++++..+.......+...++.++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 83 ~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKp 161 (462)
T 3etf_A 83 IKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLKH 161 (462)
T ss_dssp HHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEEC
Confidence 999875 9999999999999998887765522223456789999999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcC
Q 009035 239 AEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKS 318 (546)
Q Consensus 239 s~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~ 318 (546)
|+.+|+++.+|++++.++|+|+|++|+++| +.+.+..|+.||+|++|+||||+.+|+.|++.+++ ++||+++|+||||
T Consensus 162 s~~tp~~~~~l~~~l~~aglP~gv~~vv~g-~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~-~~~~v~lElGGk~ 239 (462)
T 3etf_A 162 APNVTGCAQMIARILAEAGTPAGVYGWVNA-NNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSD 239 (462)
T ss_dssp CTTCHHHHHHHHHHHHHTTCCBTTEEECCC-CHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHH-TTCCEEEECCCCE
T ss_pred CCCCcHHHHHHHHHHHHhCCCcCeEEEEEC-CHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhc-cCCceEEEcCCCC
Confidence 999999999999999999999999999998 56778899999999999999999999999999988 8899999999999
Q ss_pred cEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHH
Q 009035 319 PFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKI 398 (546)
Q Consensus 319 p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~ 398 (546)
|+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|+++++++++|+|.++++++||+++..+++++
T Consensus 240 p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 240 PFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred ccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEc
Q 009035 399 LKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFT 478 (546)
Q Consensus 399 ~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t 478 (546)
.++|++++++|+++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t 399 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFT 399 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEEC
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEEC
Confidence 99999999999999999987667899999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 479 HNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 479 ~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
+|.++++++++++++|+||||+++...+.+||||+|.||+|+++|.+|+++||+.|+|+++.
T Consensus 400 ~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~PfGG~k~SG~G~~~g~~g~~~~~~~k~v~~~r 461 (462)
T 3etf_A 400 ADDTLAAEMAARLECGGVFINGYSASDARVAFGGVKKSGFGRELSHFGLHEFCNVQTVWKNR 461 (462)
T ss_dssp SCHHHHHHHHHHCCSSEEEESSCCCCCTTSCBCCSGGGEECCBSHHHHHHTTEEEEEEEECC
T ss_pred CCHHHHHHHHHhCCcceEEECCCCCCCCCCCcCCcCCCCCCccchHHHHHHHhceeEEEEec
Confidence 99999999999999999999998888889999999999999999999999999999998753
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=8.1e-100 Score=829.38 Aligned_cols=477 Identities=26% Similarity=0.389 Sum_probs=443.5
Q ss_pred CccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 009035 64 DYTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLER 142 (546)
Q Consensus 64 ~~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~ 142 (546)
...++||||+|+.+. .++.++||.| |++|++++.++.+|+++|+++|++||+ .|+.++..+|.++|++++++|++
T Consensus 62 ~~~~~~I~G~~~~~~--~~~~~~~P~~~~~~i~~~~~a~~~dv~~Av~aA~~A~~--~W~~~~~~~R~~iL~~~a~~l~~ 137 (563)
T 4e3x_A 62 EAIPCVVGDEEVWTS--DIQYQLSPFNHAHKVAKFCYADKALLNRAIDAALAARK--EWDLKPMADRAQVFLKAADMLSG 137 (563)
T ss_dssp EECCEEETTEEECCS--CEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHT
T ss_pred ccCCeEECCEEeecC--CceeeeCCCCCCcEEEEEeCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHh
Confidence 456799999999853 4678999998 899999999999999999999999999 89999999999999999999999
Q ss_pred c-HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHH
Q 009035 143 H-NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMF 220 (546)
Q Consensus 143 ~-~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~ 220 (546)
+ +++|+.++++|+|||+.+++..++..+++.++|++.+++++.+..... +.+...+.++.|+|||++|+|||||+...
T Consensus 138 ~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~p~GVV~~I~PwNfP~~~~ 217 (563)
T 4e3x_A 138 PRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGG 217 (563)
T ss_dssp TTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEECCBCSSEEEEECCSSCHHHHH
T ss_pred ccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEEecCceEEEEECCchHHHHHH
Confidence 9 999999999999999999887459999999999999998887754222 22334566778889999999999999999
Q ss_pred HHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
.++++||| +||+||+|||+.+|+++..|++++.++|+|+|++|+|+|++.++++.|+.||+|++|.||||+.+|+.|++
T Consensus 218 ~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~hp~v~~I~FTGSt~vG~~i~~ 296 (563)
T 4e3x_A 218 NLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSVPTFKHLWR 296 (563)
T ss_dssp HHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTCTTEEEEEEESCHHHHHHHHH
T ss_pred HHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEEEECCHHHHHHHHH
Confidence 99999999 59999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred HHhhcCCcc------eEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhc
Q 009035 301 LAAKSNLKP------VTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKR 374 (546)
Q Consensus 301 ~aa~~~~~p------v~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~ 374 (546)
.+++ ++|| +++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++
T Consensus 297 ~aa~-~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~V~~si~d~f~~~l~~~~~~l 375 (563)
T 4e3x_A 297 QVAQ-NLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLYVPKSLWPQIKGRLLEEHSRI 375 (563)
T ss_dssp HHHH-TTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHTC
T ss_pred HHHh-hCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEecchHHHHHHHHHHHHHhc
Confidence 9987 6774 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCCccccCCCHHHHHHHHHHHHHHHh-CCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEE
Q 009035 375 VVGDP-FKGGIQQGPQIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSI 452 (546)
Q Consensus 375 ~vG~p-~~~~~~~Gpl~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v 452 (546)
++||| .|+++++||+++.++++++.++|+++++ +|+++++||...+.+|+|++|||+.+++++|++++||+||||++|
T Consensus 376 ~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V 455 (563)
T 4e3x_A 376 KVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTV 455 (563)
T ss_dssp CBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEEESCTTCGGGTSCCCSSEEEE
T ss_pred cCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEecCCCCChhhcCCCcCeEEEE
Confidence 99999 9999999999999999999999999996 899999999876668999999999999999999999999999999
Q ss_pred EEeCC--HHHHHHHH-HcCCCCceEEEEcCCHHHHHHHHHHhc--eeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchH
Q 009035 453 LKYKD--LDEVIQRS-NASQYGLAAGVFTHNLDTANTLMRALR--VGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGS 524 (546)
Q Consensus 453 ~~~~~--~~eai~~~-N~~~~gL~a~v~t~d~~~a~~~~~~l~--~g~V~iN~~~~--~~~~~pfgG~k~SG~g-~~~g~ 524 (546)
++|+| +||||+++ |+++|||+++|||+|.+++++++++++ +|+||||+.++ ..+.+||||+|.||+| +++|+
T Consensus 456 ~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~~~~~~~~PFGG~k~SG~g~~~~G~ 535 (563)
T 4e3x_A 456 YVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKSTGSVVGQQPFGGARASGTNDKPGGP 535 (563)
T ss_dssp EEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSCCCCTTTSCCCCEETTBCCCCTTST
T ss_pred EEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCCCCCcCCCCCCCccccCCCCccCCH
Confidence 99997 79999999 799999999999999999999999976 99999999764 3567999999999998 89999
Q ss_pred HHHHhhheeeEEEEeCC--CCCCC
Q 009035 525 YSLSNYLQVKAVVTALK--NPAWL 546 (546)
Q Consensus 525 ~~l~~~~~~k~v~~~~~--~~~~~ 546 (546)
++|++|++.|+|.+... .++||
T Consensus 536 ~~l~~~~~~k~v~~~~~~~~~~~y 559 (563)
T 4e3x_A 536 HYILRWTSPQVIKETHKPLGDWRY 559 (563)
T ss_dssp TGGGGGBCCEEEEEECSCCCCSSC
T ss_pred HHHHHhCceEEEEEeCcCCCcccC
Confidence 99999999999998864 33453
No 38
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=2.6e-99 Score=814.74 Aligned_cols=461 Identities=28% Similarity=0.412 Sum_probs=431.3
Q ss_pred CCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCC
Q 009035 78 ASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGK 157 (546)
Q Consensus 78 ~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk 157 (546)
.+++|++++||+||+++++++.++.+|+++|+++|++||+ .|+++|.++|.++|++++++|++|+++|++++++|+||
T Consensus 3 a~~~t~~v~nP~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk 80 (474)
T 4h7n_A 3 AMTKTIEVRNPRTGKFDYVIIPPPPRLLAQQCNRARRAQS--RWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGR 80 (474)
T ss_dssp CCCCCEEEECTTTCSEEEEECCCCHHHHHHHHHHHHHHHH--HHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSC
T ss_pred CCCCEEeeECCCCCCEEEEEcCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4568999999999999999999999999999999999999 89999999999999999999999999999999999999
Q ss_pred ChhhhhhccchHHHHHHHHHHHHhhHhcCccc-CC-CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEE
Q 009035 158 PFEQSAQTEVPMTTRLFRYYAGWADKIQGLTA-PA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIV 235 (546)
Q Consensus 158 ~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~-~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VV 235 (546)
+... . .|+..++..++||+.++.+...... +. ......+..++|+|||++|+|||||+.+.++++++||++||+||
T Consensus 81 ~~~~-~-~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VV 158 (474)
T 4h7n_A 81 LSIT-V-LEIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVV 158 (474)
T ss_dssp SHHH-H-HHHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEE
T ss_pred cHHH-H-HHHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCcee
Confidence 8644 3 4999999999999988877654332 22 23345677889999999999999999999999999999999999
Q ss_pred EecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecC
Q 009035 236 LKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG 315 (546)
Q Consensus 236 lkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelg 315 (546)
+|||+.+|+++..+++++.++|+|+|++|+++| +.+.+..|..| +|+|+||||+.+|+.|++.+++ ++||+++|||
T Consensus 159 lKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g-~~~~~~~l~~~--v~~v~FTGS~~~G~~i~~~aa~-~~~~v~lElG 234 (474)
T 4h7n_A 159 VKPSEIAPRFVAPLLMALNTVPELRDVLIFVEG-GGETGANLINY--VDFVCFTGSVATGREVAETAAR-RFIPAYLELG 234 (474)
T ss_dssp EEECTTSCTTHHHHHHHHTTCTTTTTTEEECCC-CHHHHHHHHTT--CSEEEEESCHHHHHHHHHHHHH-HTCCEEEECC
T ss_pred ecccccCchHHHHHHhhhhhhcccccceeeccc-cchhhhhhhhc--cceEEeccccchhhhhhhhhhc-ccccccccCC
Confidence 999999999999999999999999999999999 66788888865 9999999999999999999988 7899999999
Q ss_pred CcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHH
Q 009035 316 GKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQF 395 (546)
Q Consensus 316 G~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~ 395 (546)
||||+||++|||++.|++.+++++|+|+||.|++++|||||+++||+|+++|++++.++++|+|.++++++||+++..++
T Consensus 235 Gk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~ 314 (474)
T 4h7n_A 235 GKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQA 314 (474)
T ss_dssp CCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHH
T ss_pred CcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEecCCcccC-CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceE
Q 009035 396 EKILKYIRSGVDGGAKLETGGERLG-AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAA 474 (546)
Q Consensus 396 ~~~~~~i~~a~~~Ga~v~~gg~~~~-~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a 474 (546)
+++.+++++++++|+++++||...+ ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||++
T Consensus 315 ~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a 394 (474)
T 4h7n_A 315 GIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSA 394 (474)
T ss_dssp HHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEE
T ss_pred HHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeE
Confidence 9999999999999999999997643 578999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCHHHHHHHHHHhceeEEEEcCCCC--CCCCCCccCCCCCCCC-CcchHHHHHhhheeeEEEEeC---CCCCCC
Q 009035 475 GVFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL---KNPAWL 546 (546)
Q Consensus 475 ~v~t~d~~~a~~~~~~l~~g~V~iN~~~~--~~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k~v~~~~---~~~~~~ 546 (546)
+|||+|.++++++++++++|+||||++.. ..+..||||+|.||+| +++|.+|+++|++.|+|+++. ..|+||
T Consensus 395 ~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~~~~~~pfgG~~~SG~G~~~~G~~g~~~f~~~k~v~~~~~~~~~p~w~ 472 (474)
T 4h7n_A 395 AVFAGSEDEALKVARQLNAGAISINDAALTAMMHEGEKNAFNFSGLGGSRVGAAGLKRFLRKQAFLIKTNSTSDPWWF 472 (474)
T ss_dssp EEECSSHHHHHHHHTTSCCSEEEESSSCGGGTCCCSCCCCCGGGEESCCSSTTHHHHTTEEEEEEEEECSSSCCTTSC
T ss_pred EEEeCCHHHHHHHHHhCCeeEEEECCCCccCCcCCCCCCCcCCCCCCCCcchHHHHHHhCeEEEEEECCCCCCCCCCc
Confidence 99999999999999999999999998754 4578999999999998 789999999999999999875 458887
No 39
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=8.4e-99 Score=813.39 Aligned_cols=461 Identities=30% Similarity=0.419 Sum_probs=435.8
Q ss_pred CceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHH
Q 009035 67 QLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDE 146 (546)
Q Consensus 67 ~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~ 146 (546)
++||||+|+.+. +.+++++||+||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++
T Consensus 7 ~~~I~G~~~~~~-~~~~~~~~P~tg~~~~~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~e 83 (490)
T 3ju8_A 7 THYIAGQWLAGQ-GETLESLDPVGQGVVWSGRGADATQVDAAVCAAREAFP--AWARRPLEQRIELLERFAATLKSRADE 83 (490)
T ss_dssp CEEETTEEECCC-SCEEEEECTTTCCEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHH
T ss_pred CceECCEEecCC-CCeEEEECCCCCCEEEEECCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999864 57899999999999999999999999999999999999 899999999999999999999999999
Q ss_pred HHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHH
Q 009035 147 IAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGP 226 (546)
Q Consensus 147 la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ 226 (546)
|++++++|+|||+.+++. |+..+++.++|++.+.++..+...+...+...++.++|+|||++|+|||||+.+.++++++
T Consensus 84 la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 162 (490)
T 3ju8_A 84 LARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAVFGPYNFPGHLPNGHIVP 162 (490)
T ss_dssp HHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEEEEECCCcchHHHHHHHHHH
Confidence 999999999999999874 9999999999999988887766543222345677899999999999999999999999999
Q ss_pred HhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcC
Q 009035 227 ALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSN 306 (546)
Q Consensus 227 ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~ 306 (546)
||++||+||+|||+.+|+++.+|++++.++|+|+|++|+++| +.+.++.|+.||+||+|+||||+.+|+.|++.+++ +
T Consensus 163 ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g-~~~~~~~L~~~~~v~~V~fTGS~~~g~~i~~~aa~-~ 240 (490)
T 3ju8_A 163 ALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQG-GRETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGG-Q 240 (490)
T ss_dssp HHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCC-SHHHHHHHHTCTTCSEEEEESCHHHHHHHHHHTTT-C
T ss_pred HHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeC-CHHHHHHHHhCCCcCEEEEECcHHHHHHHHHHhhc-c
Confidence 999999999999999999999999999999999999999999 67899999999999999999999999999999887 7
Q ss_pred Ccce-EeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccc-hHHHHHHHHHhhhhcccCC-CCCCC
Q 009035 307 LKPV-TLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESV-YDQFVEKANALAMKRVVGD-PFKGG 383 (546)
Q Consensus 307 ~~pv-~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v-~d~f~~~L~~~~~~~~vG~-p~~~~ 383 (546)
++|+ ++|+|||||+||++|||+|.|++.+++++|+|+||.|++++|+|||+++ ||+|+++|+++++++++|+ |.|++
T Consensus 241 ~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~G~~~~~~~ 320 (490)
T 3ju8_A 241 PQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPA 320 (490)
T ss_dssp TTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHHHCCBCCTTCSSC
T ss_pred CCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHHHHHHHHhccCCCCCCCCc
Confidence 8998 8999999999999999999999999999999999999999999999996 9999999999999999999 99999
Q ss_pred CccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHH
Q 009035 384 IQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQ 463 (546)
Q Consensus 384 ~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~ 463 (546)
+++||+++.++++++.++|++++++|+++++||...+..|+|++|||+. ++++|++++||+||||++|++|+|+||||+
T Consensus 321 ~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~ 399 (490)
T 3ju8_A 321 PFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQVIRYSDFAAAIR 399 (490)
T ss_dssp CSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEEEEEESSHHHHHH
T ss_pred CccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEEEEEeCCHHHHHH
Confidence 9999999999999999999999999999999998766789999999999 999999999999999999999999999999
Q ss_pred HHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCC-CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 464 RSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDV-FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 464 ~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~-~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
++|+++|||+++|||+|.++++++++++++|+||||++.. ..+.+||||+|.||++ ++++|++.|+|+.+.
T Consensus 400 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~PfGG~~~SG~~------~~~~~~~~k~v~~~~ 471 (490)
T 3ju8_A 400 EANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLTGAASSAPFGGIGASGNH------RPSAYYAADYCAYPV 471 (490)
T ss_dssp HHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSSCCCTTSEECCCGGGBSS------CCEETTHHHHHEEEE
T ss_pred HHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcCCCCCCCCcCCccccchh------HHHhhheeEEEEEec
Confidence 9999999999999999999999999999999999999765 3578999999999974 589999999988764
No 40
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=4.6e-97 Score=849.02 Aligned_cols=470 Identities=31% Similarity=0.517 Sum_probs=445.8
Q ss_pred ccCceecCEeeeCCCCCeeeeecCCC-CCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHc
Q 009035 65 YTQLLINGQFVDSASGKTFPTLDPRT-GDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERH 143 (546)
Q Consensus 65 ~~~~~I~G~~~~~~~~~~~~v~~P~t-ge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~ 143 (546)
..++||||+|+. ++.+++++||+| ++++++++.++.+|+++|+++|++||. .|+.+|..+|.++|++++++|+++
T Consensus 531 ~~~~~I~G~~~~--~~~~~~v~nPa~~~~~i~~v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eRa~iL~~~Adll~~~ 606 (1026)
T 4f9i_A 531 TYPLFINGKEVR--TNDLIPTVNPNKPSEVLGQICQAGTTEVGDAIAAAKAAFP--AWRDTDPRTRAEYLLKAAQAARKR 606 (1026)
T ss_dssp EECEEETTEEEC--CSCEEEEEETTEEEEEEEEEECCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred ccCceECCEEec--CCCcEEEeCCCCCCceEEEEeCCCHHHHHHHHHHHHHHHH--hcccCCHHHHHHHHHHHHHHHHHH
Confidence 457899999997 468999999998 999999999999999999999999999 899999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCC-CCCCceeeeeccceeEEEEcCccchHHHHHH
Q 009035 144 NDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPA-DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAW 222 (546)
Q Consensus 144 ~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~-~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~ 222 (546)
+++|++++++|+|||+.++.. |+..+++.++||+.+++++.+...+. ..+..+++.++|+|||++|+|||||+.+.++
T Consensus 607 ~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGVV~~I~PwNfPl~i~~~ 685 (1026)
T 4f9i_A 607 LFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGVAAVIAPWNFPLAISMG 685 (1026)
T ss_dssp HHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSEEEEECCSSSTTHHHHH
T ss_pred HHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCceEEEeCCCccHHHHHHH
Confidence 999999999999999999875 99999999999999998877654332 3456678899999999999999999999999
Q ss_pred HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHH
Q 009035 223 KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLA 302 (546)
Q Consensus 223 ~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~a 302 (546)
++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++.++++.|+.||+|++|+||||+++|+.|++.+
T Consensus 686 ~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V~FTGSt~vg~~I~~~a 765 (1026)
T 4f9i_A 686 MASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERA 765 (1026)
T ss_dssp HHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEEEeCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hh-----cCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccC
Q 009035 303 AK-----SNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVG 377 (546)
Q Consensus 303 a~-----~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG 377 (546)
+. .++||+++|+|||||+||++|||+|.|++.+++++|.|+||.|++++|+|||+++||+|+++|+++++++++|
T Consensus 766 a~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d~f~~~L~~~~~~l~vG 845 (1026)
T 4f9i_A 766 AKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVG 845 (1026)
T ss_dssp TSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBC
T ss_pred hcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHHHHHHHHHHHHHhcccC
Confidence 73 3689999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCC
Q 009035 378 DPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD 457 (546)
Q Consensus 378 ~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~ 457 (546)
+|.|+++++||+++..+++++.++|++++++| ++++||...+..|+|++|||+.+++++|++++||+||||++|++|+|
T Consensus 846 ~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~~eEiFGPVl~V~~~~d 924 (1026)
T 4f9i_A 846 PSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIAQEEIFGPVLAVMRAKD 924 (1026)
T ss_dssp CTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGGTSCCCSSEEEEEEESS
T ss_pred CcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCccccCceecCcEEEEEEeCC
Confidence 99999999999999999999999999999999 99999976554599999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhheee
Q 009035 458 LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVK 534 (546)
Q Consensus 458 ~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~--~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k 534 (546)
+||||+++|+++|||+++|||+|.+++.++++++++|+||||+.++. .+.+||||+|.||+| +++|+++|++|++.|
T Consensus 925 ~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~~l~~f~~~k 1004 (1026)
T 4f9i_A 925 FDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTGALVERQPFGGARMSGVGTKAGGPDYLLHFMDPR 1004 (1026)
T ss_dssp HHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCCCCTTTSCBCCCGGGBSSCCBTSTTTGGGGEEEE
T ss_pred HHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCCCCCCCCCCCCcCcCCCCCCcCCHHHHHHhceEE
Confidence 99999999999999999999999999999999999999999997653 467999999999999 579999999999999
Q ss_pred EEEEeC
Q 009035 535 AVVTAL 540 (546)
Q Consensus 535 ~v~~~~ 540 (546)
+|+++.
T Consensus 1005 ~v~~~~ 1010 (1026)
T 4f9i_A 1005 VVTENT 1010 (1026)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 998875
No 41
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=2.6e-97 Score=809.76 Aligned_cols=465 Identities=25% Similarity=0.335 Sum_probs=424.8
Q ss_pred cCceecCEeeeCCCCCeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHh-cccCCCCCCCHHHHHHHHHHHHHHHHHcH
Q 009035 66 TQLLINGQFVDSASGKTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKA-FDEGPWPRMTAYERSKIILRFADLLERHN 144 (546)
Q Consensus 66 ~~~~I~G~~~~~~~~~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A-~~~~~W~~~~~~~R~~~L~~~a~~l~~~~ 144 (546)
.++||||+|+.+.+ .+++++||+||+++++++.++ +|+++|+++|++| |+ .|+.++..+|.++|++++++|++|.
T Consensus 8 ~~~~i~G~~~~~~~-~~~~v~nP~tg~~i~~~~~~~-~dv~~Av~aA~~A~~~--~w~~~~~~~R~~~L~~~a~~l~~~~ 83 (534)
T 2y53_A 8 LKNHVAGQWIAGTG-AGITLTDPVTGVALVRVSSEG-LDLARAFSFAREDGGA--ALRALTYAQRAARLADIVKLLQAKR 83 (534)
T ss_dssp CCEEETTEEECCSS-SCEEEECTTTCCEEEEECCTT-CCHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTH
T ss_pred hhhEECCEEecCCC-CeEEEECCCCCCEEEEEeCCH-HHHHHHHHHHHHHhhh--hhhhCCHHHHHHHHHHHHHHHHHhH
Confidence 46899999997644 579999999999999999987 9999999999999 58 8999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcc-------cCCC--CCCceeeeeccc-eeEEEEcCcc
Q 009035 145 DEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLT-------APAD--GPYHVQTLHEPI-GVAGQIIPWN 214 (546)
Q Consensus 145 ~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~-------~~~~--~~~~~~~~~~P~-GVv~~i~p~n 214 (546)
++|++++++|+|||+.++.. |+..+++.++||+.+++++.+.. .+.. .....++.++|+ |||++|+|||
T Consensus 84 ~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GVv~~I~PwN 162 (534)
T 2y53_A 84 GDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGVALFINAFN 162 (534)
T ss_dssp HHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSCEEEECCTT
T ss_pred HHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCEEEEECCCc
Confidence 99999999999999999875 99999999999999887764321 1221 122457889997 9999999999
Q ss_pred chHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcC-CCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCch
Q 009035 215 FPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAG-LPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTT 293 (546)
Q Consensus 215 ~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aG-lP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~ 293 (546)
||+.+.++++++||++||+||+|||+.+|+++..|++++.++| +|+|++|+|+|.+.+++..| +++|+|+||||+.
T Consensus 163 ~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l---~~vd~V~FTGS~~ 239 (534)
T 2y53_A 163 FPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI---RSFDVVSFTGSAD 239 (534)
T ss_dssp CTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC---CTTCEEEEESCHH
T ss_pred hHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc---cccCEEEEECCHH
Confidence 9999999999999999999999999999999999999999999 89999999999665433322 5799999999999
Q ss_pred HHHHHHHHHh-hcCCcceEeecCCcCcEEEecCC-----CHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHH
Q 009035 294 TGKIVLQLAA-KSNLKPVTLELGGKSPFIVCEDA-----DVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKA 367 (546)
Q Consensus 294 ~g~~i~~~aa-~~~~~pv~lelgG~~p~iV~~dA-----Dl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L 367 (546)
+|+.|++.++ ..++||+++|||||||+||++|| |+|.|++.+++++|.|+||.|++++|||||+++||+|+++|
T Consensus 240 ~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l 319 (534)
T 2y53_A 240 TAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEAL 319 (534)
T ss_dssp HHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHH
T ss_pred HHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCCEEEEeccHHHHHHHHH
Confidence 9999998875 23799999999999999999999 99999999999999999999999999999999999999999
Q ss_pred HHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCccc------CCCCceecceeeccCCCC--Cc
Q 009035 368 NALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERL------GAKGYYIKPTVFTGVKDD--ML 439 (546)
Q Consensus 368 ~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~------~~~g~~~~Ptv~~~v~~~--~~ 439 (546)
+++++++++|||+|+++++|||++..+++++.++|+++ .+|+++++||... ...|+|++|||+.+++++ |+
T Consensus 320 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~~~ 398 (534)
T 2y53_A 320 KAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAACVAPHLFVVNDPDNATL 398 (534)
T ss_dssp HHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCCCCCEEEECSCGGGCSS
T ss_pred HHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCceecCEEEEecCccccCH
Confidence 99999999999999999999999999999999999999 6899999999742 136999999999999987 69
Q ss_pred ccccccccceEEEEEeC---CH-----HHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh--ceeEEEEcCCCC------
Q 009035 440 IAKDEIFGPVQSILKYK---DL-----DEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL--RVGSVWINCFDV------ 503 (546)
Q Consensus 440 i~~eE~fgPvl~v~~~~---~~-----~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l--~~g~V~iN~~~~------ 503 (546)
+++||+||||++|++|+ |+ ||||+++|+++|||+++|||+|.++++++++++ ++|+||||+++.
T Consensus 399 i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~aG~V~vN~~~~~~~~~~ 478 (534)
T 2y53_A 399 LHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSHGRVHAISPSVQHSQTG 478 (534)
T ss_dssp TTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTEEEEEEECGGGTTTCCC
T ss_pred HHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhCCEEEEcCCcccccccc
Confidence 99999999999999999 99 999999999999999999999999999999999 899999998642
Q ss_pred ---CCCCCCccCCCCCCCCCc-chHHHHHhhheeeEEEEe
Q 009035 504 ---FDAAIPFGGYKQSGQGRE-KGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 504 ---~~~~~pfgG~k~SG~g~~-~g~~~l~~~~~~k~v~~~ 539 (546)
..+.+||||+|.||+|++ +|.+++++|++.|++...
T Consensus 479 ~~~~~~~~pfGG~k~SG~Gr~~~g~~~l~~~~~~k~v~~~ 518 (534)
T 2y53_A 479 HGNVMPMSLHGGPGRAGGGEELGGLRALAFYHRRSAIQAA 518 (534)
T ss_dssp SSCCCTTSEECCSGGGCSCCEESGGGGGGGGEEEEEEEEE
T ss_pred cCCCCCCCCCCCcccCCCCCCcchHHHHHHHhhhheeecC
Confidence 357899999999999999 699999999999998763
No 42
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=3.6e-95 Score=779.05 Aligned_cols=444 Identities=25% Similarity=0.403 Sum_probs=401.2
Q ss_pred CeeeeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChh
Q 009035 81 KTFPTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE 160 (546)
Q Consensus 81 ~~~~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ 160 (546)
..+++.||+||++|++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||+.
T Consensus 6 ~~~~~~~~~~~~~i~~v~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ 83 (457)
T 3lns_A 6 HHHHHSSGHIDDDDKHMNYLSPAKIDSLFSAQKAYFA--TRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKD 83 (457)
T ss_dssp -----------------CCCCHHHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHH
T ss_pred ccccccCCCCCCeeeecCCCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHH
Confidence 4578999999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred hhhhccchHHHHHHHHHHHHhhHhcCcc-cCC---CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEE
Q 009035 161 QSAQTEVPMTTRLFRYYAGWADKIQGLT-APA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVL 236 (546)
Q Consensus 161 ~a~~~ev~~~~~~l~~~a~~a~~~~~~~-~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVl 236 (546)
+++..|+..+++.++|++..+++..+.. .+. ..+...++.++|+|||++|+|||||+.+.++++++||++||+||+
T Consensus 84 ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVl 163 (457)
T 3lns_A 84 VVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCII 163 (457)
T ss_dssp HHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEE
Confidence 9875699999999999998887765432 221 124567899999999999999999999999999999999999999
Q ss_pred ecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCC
Q 009035 237 KTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGG 316 (546)
Q Consensus 237 kps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG 316 (546)
|||+.+|+++..|++++.++ +|+|++|+|+| +.+.+..|+. ++||+|+||||+.+|+.|++.+++ ++||+++||||
T Consensus 164 Kps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g-~~~~~~~L~~-~~vd~V~fTGS~~~G~~i~~~aa~-~l~pv~lElGG 239 (457)
T 3lns_A 164 KPSETTPETSAVIEKIIAEA-FAPEYVAVIQG-GRDENSHLLS-LPFDFIFFTGSPNVGKVVMQAAAK-HLTPVVLELGG 239 (457)
T ss_dssp ECCTTCHHHHHHHHHHHHHH-CCTTTEEECCC-CHHHHHHHTT-SCCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCC
T ss_pred ECCCCChHHHHHHHHHHHHh-CCHhhEEEecC-CHHHHHHHhc-CCCCEEEEECCHHHHHHHHHHHhh-ccCceEEECCC
Confidence 99999999999999999999 99999999999 7788999998 789999999999999999999887 89999999999
Q ss_pred cCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHH
Q 009035 317 KSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFE 396 (546)
Q Consensus 317 ~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~ 396 (546)
|||+||++|||+|.|++.+++++|.|+||.|++++|||||+++||+|+++|++++++++ |.++ ++||+++.++++
T Consensus 240 k~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~--~~gpli~~~~~~ 314 (457)
T 3lns_A 240 KCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN--STGKLVTERQVQ 314 (457)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT--TTCCCSSHHHHH
T ss_pred CCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc--cccCCCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999987 7776 999999999999
Q ss_pred HHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHc-CCCCceEE
Q 009035 397 KILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA-SQYGLAAG 475 (546)
Q Consensus 397 ~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~-~~~gL~a~ 475 (546)
++.++|+++. +++++||... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+ ++|||+++
T Consensus 315 rv~~~i~~a~---~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~ 390 (457)
T 3lns_A 315 RLVSLLEATQ---GQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVY 390 (457)
T ss_dssp HHHHHHHHCC---SEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEE
T ss_pred HHHHHHHhcC---CeEEeCCccC-CCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEE
Confidence 9999999863 5999999753 36899999999999999999999999999999999999999999999 99999999
Q ss_pred EEcCCHHHHHHHHHHhceeEEEEcCCCC--CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEe
Q 009035 476 VFTHNLDTANTLMRALRVGSVWINCFDV--FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTA 539 (546)
Q Consensus 476 v~t~d~~~a~~~~~~l~~g~V~iN~~~~--~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~ 539 (546)
|||+|.++++++++++++|+||||++.. ..+.+||||+|.||+|+++|.+|+++||+.|+|++.
T Consensus 391 v~t~d~~~a~~~~~~l~aG~v~vN~~~~~~~~~~~PfGG~k~SG~G~~~g~~~~~~f~~~k~v~~~ 456 (457)
T 3lns_A 391 VFGKDMDVAKGIINQIQSGDAQVNGVMLHAFSPYLPFGGIGASGMGEYHGHFSYLTFTHKKSVRIV 456 (457)
T ss_dssp EECSCHHHHHHHHHTSCCSEEEESCCSGGGGCTTSCBCCCGGGEECCBSHHHHHHHTEEEEEEEEC
T ss_pred EECCCHHHHHHHHHhCCcceEEEcCCCCCCCCCCCCcCCcCcCCCCCCchHHHHHHhhCeeEEEeC
Confidence 9999999999999999999999999743 568899999999999999999999999999999763
No 43
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=1.2e-93 Score=768.14 Aligned_cols=428 Identities=28% Similarity=0.383 Sum_probs=395.5
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHH
Q 009035 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAG 179 (546)
Q Consensus 100 ~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~ 179 (546)
.+.+|+++|+++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+|||+.+++..|+..++..++|++.
T Consensus 15 ~s~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~ 92 (469)
T 3sza_A 15 SHMSKISEAVKRARAAFS--SGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQ 92 (469)
T ss_dssp ---CHHHHHHHHHHHHHH--TTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 456799999999999999 899999999999999999999999999999999999999999876799999999999877
Q ss_pred HhhHhcCcc-c---CCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHH
Q 009035 180 WADKIQGLT-A---PADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE 255 (546)
Q Consensus 180 ~a~~~~~~~-~---~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~ 255 (546)
...+..... . ....+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..|++++.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~ 172 (469)
T 3sza_A 93 KLPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQ 172 (469)
T ss_dssp HHHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred HHHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHH
Confidence 655433221 1 111234678999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHH
Q 009035 256 AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELA 335 (546)
Q Consensus 256 aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i 335 (546)
+ +|+|++|+++|.+ +.+..|+.| +||+|+||||+.+|+.|++.+++ ++||+++|||||||+||++|||+|.|++.+
T Consensus 173 a-lP~gvv~vv~g~~-~~~~~ll~~-~vd~I~FTGS~~vG~~i~~~aa~-~lkpv~lELGGk~p~iV~~dADl~~Aa~~i 248 (469)
T 3sza_A 173 Y-LDKDLYPVINGGV-PETTELLKE-RFDHILYTGSTGVGKIIMTAAAK-HLTPVTLELGGKSPCYVDKNCDLDVACRRI 248 (469)
T ss_dssp H-SCTTTSCBCCCSH-HHHHHHTTS-CCSEEEEESCHHHHHHHHHHHHT-TTCCEEEECCCCCEEEECTTSCHHHHHHHH
T ss_pred h-CCcceEEEEECCH-HHHHHHHhc-CCCEEEEECCHHHHHHHHHHHhh-ccCceEEecCCCCceEECCCCCHHHHHHHH
Confidence 8 9999999999954 445667777 89999999999999999999887 899999999999999999999999999999
Q ss_pred HHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecC
Q 009035 336 HYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETG 415 (546)
Q Consensus 336 ~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~g 415 (546)
++++|.|+||.|++++|||||+++||+|+++|+++++++ +|+|.++++++||+++.++++++.++| +|+++++|
T Consensus 249 ~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~G 322 (469)
T 3sza_A 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYG 322 (469)
T ss_dssp HHHHHGGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEEC
T ss_pred HHHHHhcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeC
Confidence 999999999999999999999999999999999999988 699999999999999999999999999 68999999
Q ss_pred CcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhceeE
Q 009035 416 GERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALRVGS 495 (546)
Q Consensus 416 g~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~ 495 (546)
|... ..|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|+++|||+++|||+|.++++++++++++|+
T Consensus 323 G~~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~ 401 (469)
T 3sza_A 323 GTGD-AATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGG 401 (469)
T ss_dssp CCEE-TTTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSE
T ss_pred CccC-CCCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcce
Confidence 9864 479999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEcCCC--CCCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 496 VWINCFD--VFDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 496 V~iN~~~--~~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
||||++. ...+.+||||+|.||+|+++|.+|+++||+.|+|+.+.
T Consensus 402 V~vN~~~~~~~~~~~PfGG~k~SG~Gr~~G~~g~~~ft~~K~v~~~~ 448 (469)
T 3sza_A 402 VAANDVIVHITLHSLPFGGVGNSGMGSYHGKKSFETFSHRRSCLVRP 448 (469)
T ss_dssp EEESCSSGGGSCTTSCBCCCGGGEECCBSTHHHHHHTEEEEEEEECC
T ss_pred EEEeCCCCCCCCCCCCcCCccccccCccchHHHHHHhhCeeEEEECC
Confidence 9999975 34688999999999999999999999999999998864
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=5.8e-93 Score=774.46 Aligned_cols=453 Identities=24% Similarity=0.324 Sum_probs=414.3
Q ss_pred CCccCceecCEeeeCCCCCeeeeecCCCCCEEE-EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHH
Q 009035 63 VDYTQLLINGQFVDSASGKTFPTLDPRTGDVIT-HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLE 141 (546)
Q Consensus 63 ~~~~~~~I~G~~~~~~~~~~~~v~~P~tge~i~-~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~ 141 (546)
....++||||+|+.+.+ ++||+||++++ +++.++.+|+++|+++|++||. .|+.++..+|.++|++++++|+
T Consensus 27 ~~~~~~~I~G~~~~~~~-----v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~ 99 (528)
T 3v4c_A 27 TPKGKHLVAGEWLDGAG-----TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFW--TYGYSSRKERAAFLRAIADEIE 99 (528)
T ss_dssp CCCCCEEETTEEECCSS-----EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred ccccCceECCEEecCCC-----ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHH
Confidence 34457899999998642 89999999998 9999999999999999999999 8999999999999999999999
Q ss_pred HcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHh--cCccc----CC---CCCCceeeeeccceeEEEEcC
Q 009035 142 RHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKI--QGLTA----PA---DGPYHVQTLHEPIGVAGQIIP 212 (546)
Q Consensus 142 ~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~--~~~~~----~~---~~~~~~~~~~~P~GVv~~i~p 212 (546)
++.++|++++++|+|||+.+++. |+..+++.++||+.++++. .+... +. ..+...++.++|+|||++|+|
T Consensus 100 ~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~P 178 (528)
T 3v4c_A 100 ARAEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPVGPVAVFGA 178 (528)
T ss_dssp HTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEECSCEEEECC
T ss_pred HhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCCcEEEEECC
Confidence 99999999999999999999875 9999999999999988772 22221 11 122346889999999999999
Q ss_pred ccchHHHHH--HHHHHHhhcCCeEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCccEE
Q 009035 213 WNFPLLMFA--WKVGPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKL 286 (546)
Q Consensus 213 ~n~P~~~~~--~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V 286 (546)
||||+.+.+ +++++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+|+|.+.++++.|+.||+||+|
T Consensus 179 wN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~V 258 (528)
T 3v4c_A 179 SNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALVQHPHIKAV 258 (528)
T ss_dssp SSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHHHCTTCCEE
T ss_pred CcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHHhCCCCCEE
Confidence 999999865 99999999999999999999999999999875 468999999999999888999999999999999
Q ss_pred EecCCchHHHHHHHHHhhcCC--cceEeecCCcCcEEEecCC---CHHHHHHHHHHHHhccCCCcccCCCeEEEccc-ch
Q 009035 287 AFTGSTTTGKIVLQLAAKSNL--KPVTLELGGKSPFIVCEDA---DVDKAAELAHYALFFNQGQCCCAGSRTFVHES-VY 360 (546)
Q Consensus 287 ~ftGs~~~g~~i~~~aa~~~~--~pv~lelgG~~p~iV~~dA---Dl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~-v~ 360 (546)
+||||+.+|+.|++.+++ ++ ||+++|+|||||+||++|| |++.|++.+++++|.|+||.|++++|||||++ +|
T Consensus 259 ~fTGS~~~G~~i~~~aa~-~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~ 337 (528)
T 3v4c_A 259 GFTGSLAGGRALFDLCAA-RPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADA 337 (528)
T ss_dssp EEESCHHHHHHHHHHHHH-SSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCTTCCCEEEEESSHHH
T ss_pred EEECChHHHHHHHHHHhh-ccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCccccCcEEEEecccHH
Confidence 999999999999999987 77 8999999999999999999 88999999999999999999999999999997 99
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCC---
Q 009035 361 DQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDD--- 437 (546)
Q Consensus 361 d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~--- 437 (546)
|+|+++|+++++++++| +.+||+++..+.+++.++++ ++|+++++||.. .|+|++|||+.+++++
T Consensus 338 d~f~~~l~~~~~~~~~~------~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~~PTvl~~~~~~~~~ 405 (528)
T 3v4c_A 338 DRFTTAAVEALAKVAPQ------TMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDASPNLFETTGAQFLA 405 (528)
T ss_dssp HHHHHHHHHHHHTCCCE------ECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEECCEEEEEEHHHHHH
T ss_pred HHHHHHHHHHHHhcccC------CCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCceeccEEEEecCccccc
Confidence 99999999999987654 67899998888888877763 589999999975 7999999999988887
Q ss_pred CcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcC--CHHHHHHHHHHhc--eeEEEEcCCCC---CCCCCCc
Q 009035 438 MLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH--NLDTANTLMRALR--VGSVWINCFDV---FDAAIPF 510 (546)
Q Consensus 438 ~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~--d~~~a~~~~~~l~--~g~V~iN~~~~---~~~~~pf 510 (546)
|++++||+||||++|++|+|+||||+++|+++|||+++|||+ |.+++++++++++ +|+||||++++ .++.+||
T Consensus 406 ~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN~~~~~~~~~~~~pf 485 (528)
T 3v4c_A 406 DHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVNGFPTGVEVVDSMVH 485 (528)
T ss_dssp CGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEESSCTTCCCCSTTCCC
T ss_pred ChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEcCCCCCCccCCCCCC
Confidence 899999999999999999999999999999999999999999 8999999999998 99999999765 3578999
Q ss_pred cC-CCCCCCCCcc--hHHHHHhhheeeEE
Q 009035 511 GG-YKQSGQGREK--GSYSLSNYLQVKAV 536 (546)
Q Consensus 511 gG-~k~SG~g~~~--g~~~l~~~~~~k~v 536 (546)
|| +|.||+|+++ |++|+++|++.|++
T Consensus 486 GG~~~~Sg~gr~~~~G~~gl~~~~~~k~~ 514 (528)
T 3v4c_A 486 GGPYPASTNFGATSVGTMSIRRFLRPVAY 514 (528)
T ss_dssp CCTTTTBSCTTCCSSSGGGGGGGEEEEEE
T ss_pred CCCCCCCCCCCCCCCcHHHHHHhchhHHh
Confidence 99 9999999986 99999999999975
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=9.1e-91 Score=754.16 Aligned_cols=443 Identities=21% Similarity=0.308 Sum_probs=405.8
Q ss_pred CCCCCeeeeecCCCCCEE-EEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhc
Q 009035 77 SASGKTFPTLDPRTGDVI-THVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN 155 (546)
Q Consensus 77 ~~~~~~~~v~~P~tge~i-~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~ 155 (546)
+.++++++++||+||+++ ++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+
T Consensus 3 ~~~~~~~~~~nP~tg~~i~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~ 80 (510)
T 1ez0_A 3 PQTDNVFYATNAFTGEALPLAFPVHTEVEVNQAATAAAKVAR--DFRRLNNSKRASLLRTIASELEARSDDIIARAHLET 80 (510)
T ss_dssp --CCCEEEEECTTTSSEEEEEEECCCHHHHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCCCeEEeECCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH--HHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 456788999999999999 79999999999999999999999 899999999999999999999999999999999999
Q ss_pred CCChhhhhhccchHHHHHHHHHHHHhhH--hcCccc----CC--CCC-CceeeeeccceeEEEEcCccchHHHH--HHHH
Q 009035 156 GKPFEQSAQTEVPMTTRLFRYYAGWADK--IQGLTA----PA--DGP-YHVQTLHEPIGVAGQIIPWNFPLLMF--AWKV 224 (546)
Q Consensus 156 Gk~~~~a~~~ev~~~~~~l~~~a~~a~~--~~~~~~----~~--~~~-~~~~~~~~P~GVv~~i~p~n~P~~~~--~~~l 224 (546)
|||+.++.. |+..+++.++||+.++++ ..+... +. +.+ ...++.++|+|||++|+|||||+.+. .+++
T Consensus 81 Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ 159 (510)
T 1ez0_A 81 ALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDT 159 (510)
T ss_dssp CCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHH
T ss_pred CCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHH
Confidence 999988764 999999999999998875 333221 11 111 13578999999999999999999985 4999
Q ss_pred HHHhhcCCeEEEecCCCChHHHHHHHHHH----HHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHH
Q 009035 225 GPALACGNTIVLKTAEQTPLSALYVSKLL----HEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQ 300 (546)
Q Consensus 225 ~~ALaaGN~VVlkps~~~p~t~~~l~~~l----~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~ 300 (546)
++||++||+||+|||+.+|+++..+++++ .++|+|+|++|+++|.+.++++.|+.||+||+|+||||+.+|+.|++
T Consensus 160 ~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~ 239 (510)
T 1ez0_A 160 ASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN 239 (510)
T ss_dssp HHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHH
T ss_pred HHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHH
Confidence 99999999999999999999999999988 56799999999999988889999999999999999999999999999
Q ss_pred HHhhcCC--cceEeecCCcCcEEEecCCCHH--HHHHHHHHHHhccCCCcccCCCeEEEccc-chHHHHHHHHHhhhhcc
Q 009035 301 LAAKSNL--KPVTLELGGKSPFIVCEDADVD--KAAELAHYALFFNQGQCCCAGSRTFVHES-VYDQFVEKANALAMKRV 375 (546)
Q Consensus 301 ~aa~~~~--~pv~lelgG~~p~iV~~dADl~--~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~-v~d~f~~~L~~~~~~~~ 375 (546)
.+++ ++ ||+++|||||||+||++|||+| .|++.+++++|.|+||.|++++|||||++ +||+|+++|++++++++
T Consensus 240 ~aa~-~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~ 318 (510)
T 1ez0_A 240 LAHE-RPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQS 318 (510)
T ss_dssp HHHH-SSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCC
T ss_pred Hhhc-cCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcC
Confidence 9887 54 9999999999999999999999 99999999999999999999999999999 99999999999999876
Q ss_pred cCCCCCCCCccccCCCHHHHHHHHHHHHHHH-hCCCeEecCCcccCCCCceecceeeccCCCC---CcccccccccceEE
Q 009035 376 VGDPFKGGIQQGPQIDSEQFEKILKYIRSGV-DGGAKLETGGERLGAKGYYIKPTVFTGVKDD---MLIAKDEIFGPVQS 451 (546)
Q Consensus 376 vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~---~~i~~eE~fgPvl~ 451 (546)
+ ||++++.+.+++.++|++++ ++|+++++||. .|+|++|||+.+++++ |++++||+||||++
T Consensus 319 ~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~ 384 (510)
T 1ez0_A 319 P----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCVASALFVTSSENWRKHPAWEEEIFGPQSL 384 (510)
T ss_dssp C----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEE
T ss_pred C----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEecCEEEEecCCccccCHHHcCCccCCeEE
Confidence 4 68899999999999999999 47999999997 2899999999988777 99999999999999
Q ss_pred EEEeCCHHHHHHHHHcCCCCceEEEEcCCH--HHHHHHHHHh--ceeEEEEcCCCC---CCCCCCccC-CCCCCCCC--c
Q 009035 452 ILKYKDLDEVIQRSNASQYGLAAGVFTHNL--DTANTLMRAL--RVGSVWINCFDV---FDAAIPFGG-YKQSGQGR--E 521 (546)
Q Consensus 452 v~~~~~~~eai~~~N~~~~gL~a~v~t~d~--~~a~~~~~~l--~~g~V~iN~~~~---~~~~~pfgG-~k~SG~g~--~ 521 (546)
|++|+|+||||+++|+++|||+++|||+|. ++++++++++ ++|+||||++++ ..+.+|||| +|.||+|+ +
T Consensus 385 v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN~~~~~~~~~~~~pfGG~~~~sG~g~~~~ 464 (510)
T 1ez0_A 385 IVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNGWPTGVEVGYAMVHGGPYPASTHSASTS 464 (510)
T ss_dssp EEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESSCSSCCCCSSSCCCCCSTTSCSCSSCCS
T ss_pred EEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEECCCCccCccCCCCCCCCCCCCcCCCCCCC
Confidence 999999999999999999999999999987 7999999999 799999999765 457899999 79999985 4
Q ss_pred chHHHHHhhheeeEEE
Q 009035 522 KGSYSLSNYLQVKAVV 537 (546)
Q Consensus 522 ~g~~~l~~~~~~k~v~ 537 (546)
+|.+|+++|++.|++.
T Consensus 465 ~G~~gl~~~~~~k~~~ 480 (510)
T 1ez0_A 465 VGAEAIHRWLRPVAYQ 480 (510)
T ss_dssp SSGGGGGGGEEEEEEE
T ss_pred ccHHHHHHhheEEEEc
Confidence 8999999999998764
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=6.8e-89 Score=779.82 Aligned_cols=435 Identities=30% Similarity=0.465 Sum_probs=411.1
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHHH
Q 009035 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRY 176 (546)
Q Consensus 97 v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~ 176 (546)
++.++.+|+++|+++|++||. .|+.+|..+|.++|++++++|+++.++|++++++|+|||+.++.. |+..+++.++|
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~--~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~ 620 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFA--GWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRY 620 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHH--HHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHH--HhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHH
Confidence 889999999999999999999 899999999999999999999999999999999999999999875 99999999999
Q ss_pred HHHHhhHhcCcc--cCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHH
Q 009035 177 YAGWADKIQGLT--APADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH 254 (546)
Q Consensus 177 ~a~~a~~~~~~~--~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~ 254 (546)
|+.++++..+.. .+...+...++.++|+|||++|+|||||+.++++++++||++||+||+|||+.+|+++..+++++.
T Consensus 621 ~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 621 YAAQGRKLFGSETAMPGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHHHSSCEECCCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHHHhhcCccccccCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 999998877653 334456678899999999999999999999999999999999999999999999999999999999
Q ss_pred HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc--CCcceEeecCCcCcEEEecCCCHHHHH
Q 009035 255 EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS--NLKPVTLELGGKSPFIVCEDADVDKAA 332 (546)
Q Consensus 255 ~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~--~~~pv~lelgG~~p~iV~~dADl~~a~ 332 (546)
++|+|+|++|+|+|.+.+ +..|+.||+||+|+||||+.+|+.|++.++++ +++|+++|+|||||+||++|||+|.|+
T Consensus 701 eAGlP~gvv~vV~G~g~~-g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa 779 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRI-GAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVA 779 (1001)
T ss_dssp HHTCCTTTEEECCCCHHH-HHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHH
T ss_pred HhCcCcCcEEEEecCchH-HHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHH
Confidence 999999999999998877 99999999999999999999999999998863 489999999999999999999999999
Q ss_pred HHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeE
Q 009035 333 ELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKL 412 (546)
Q Consensus 333 ~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v 412 (546)
+.+++++|.|+||.|+++++||||+++||+|+++|+++++++++|+|.++++++||+++..+++++.++|++++++| ++
T Consensus 780 ~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v 858 (1001)
T 3haz_A 780 DDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL 858 (1001)
T ss_dssp HHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE
T ss_pred HHHHHHHHhCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888 88
Q ss_pred ecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCC--HHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHH
Q 009035 413 ETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKD--LDEVIQRSNASQYGLAAGVFTHNLDTANTLMRA 490 (546)
Q Consensus 413 ~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~--~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~ 490 (546)
+||... ..|+|++|||+.+ ++|.+++||+||||++|++|++ +||||+++|+++|||+++|||+|.+++++++++
T Consensus 859 -~gg~~~-~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~ 934 (1001)
T 3haz_A 859 -HFAGPA-PEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDR 934 (1001)
T ss_dssp -EEECCC-CSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHH
T ss_pred -eccccC-CCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHh
Confidence 888753 4699999999974 6889999999999999999996 799999999999999999999999999999999
Q ss_pred hceeEEEEcCCCCC--CCCCCccCCCCCCCC-CcchHHHHHhhheeeEEEEeC
Q 009035 491 LRVGSVWINCFDVF--DAAIPFGGYKQSGQG-REKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 491 l~~g~V~iN~~~~~--~~~~pfgG~k~SG~g-~~~g~~~l~~~~~~k~v~~~~ 540 (546)
+++|+||||+.++. .+.+||||+|.||+| +++|++++++|++.|+|+++.
T Consensus 935 l~aG~V~VN~~~~~~~~~~~PFGG~k~SG~G~~~gG~~gl~~ft~~K~v~~~~ 987 (1001)
T 3haz_A 935 VQVGNIYVNRNMIGAVVGVQPFGGNGLSGTGPKAGGPHYLARFATEQTVTINT 987 (1001)
T ss_dssp CCCSEEEESSCSCCCCTTTSCBCCCGGGBCCCCBTSTTSGGGGEEEEEEEEEC
T ss_pred CCeeeEEEeCCCcCCCCCCCCCCCcccCcCCCCCCCHHHHHHhceeeEEEECC
Confidence 99999999997653 357899999999999 679999999999999998874
No 47
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=1e-83 Score=689.49 Aligned_cols=404 Identities=19% Similarity=0.169 Sum_probs=337.1
Q ss_pred eeecCCCCCEEEEEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhc-------C
Q 009035 84 PTLDPRTGDVITHVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDN-------G 156 (546)
Q Consensus 84 ~v~~P~tge~i~~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------G 156 (546)
-++||.||+++++++.++.+|+++++++|++||+ .|+.++..+|.++|++++++|+++.++|++++++|+ |
T Consensus 10 ~~~~P~tg~~~~~~~~~~~~~v~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~G 87 (463)
T 2h5g_A 10 GVDLGTENLYFQSMVKPAGPTVEQQGEMARSGGR--MLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLA 87 (463)
T ss_dssp -------------------CCHHHHHHHHHHHHH--HHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSC
T ss_pred CCcCCCCCCEEEEecCCCHHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCC
Confidence 5789999999999999999999999999999999 899999999999999999999999999999999999 7
Q ss_pred CChh----hhhhccchHHHHHHHHHHHHhhHhcCcccCCC---CCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhh
Q 009035 157 KPFE----QSAQTEVPMTTRLFRYYAGWADKIQGLTAPAD---GPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALA 229 (546)
Q Consensus 157 k~~~----~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~---~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALa 229 (546)
||+. ++. .|+..+++.++|++.++++..+...+.. .+...++.++|+|||++|+||| |.+.. +++++||+
T Consensus 88 k~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 88 APLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLRRTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEEEEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred CchhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccccccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 9987 344 5999999999999988877766543321 2445688999999999999887 77776 89999999
Q ss_pred cCCeEEEecCCCChHHHHHHHHHHHHc----CCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhc
Q 009035 230 CGNTIVLKTAEQTPLSALYVSKLLHEA----GLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKS 305 (546)
Q Consensus 230 aGN~VVlkps~~~p~t~~~l~~~l~~a----GlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~ 305 (546)
+||+||+|||+.+|+++..|++++.++ | |+|++|+|+| +.++++.|+.||+||+|+||||+.+|+.|++.++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g-~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa-- 240 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNT-REEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK-- 240 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCT-TCCC-------CCCSEEEEESCHHHHHHHHHHCS--
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcC-CHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--
Confidence 999999999999999999999999999 9 9999999999 7788999999999999999999999999999876
Q ss_pred CCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCc
Q 009035 306 NLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQ 385 (546)
Q Consensus 306 ~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~ 385 (546)
+||+++|||||||+||++|||+|.|++.+++++|.| ||.|++++|||||+++||
T Consensus 241 -l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~~rvlV~~~i~d------------------------ 294 (463)
T 2h5g_A 241 -GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNALETLLIHRDLLR------------------------ 294 (463)
T ss_dssp -SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSEEEEEEEGGGTT------------------------
T ss_pred -CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccCcEEEEeccccc------------------------
Confidence 799999999999999999999999999999999999 999999999999999998
Q ss_pred cccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHH
Q 009035 386 QGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRS 465 (546)
Q Consensus 386 ~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~ 465 (546)
||+ ++ +++++++++|++++.|+.. ...|+|+ +++|++++||+||||++|++|+|+||||+++
T Consensus 295 -~p~-----~~---~~i~~~~~~Ga~v~~G~~~-~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~a 356 (463)
T 2h5g_A 295 -TPL-----FD---QIIDMLRVEQVKIHAGPKF-ASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHI 356 (463)
T ss_dssp -SHH-----HH---HHHHHHHHTTCEEEECHHH-HC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHH
T ss_pred -hHH-----HH---HHHHHHHhCCCEEEeCCcc-cccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHH
Confidence 333 23 3578888999999855432 2345543 5789999999999999999999999999999
Q ss_pred HcCCCCceEEEEcCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCC--Cc--chHHHHHhhheeeEEEEeC
Q 009035 466 NASQYGLAAGVFTHNLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG--RE--KGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 466 N~~~~gL~a~v~t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g--~~--~g~~~l~~~~~~k~v~~~~ 540 (546)
|+++|||+++|||+|.++++++++++++|+||||++....+.+||||+|.||+| ++ +|++|+++|++.|+|+.+.
T Consensus 357 N~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~~~~~~PfGG~k~SG~G~~r~~~~G~~gl~~ft~~K~v~~~~ 435 (463)
T 2h5g_A 357 HKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTRFSDGYRFGLGAEVGISTSRIHARGPVGLEGLLTTKWLLRGK 435 (463)
T ss_dssp HHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGGGCSTTTTTSSCCSCEECCSSSCCEECCGGGGEEEEEEEECS
T ss_pred HcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCccCCCCCCCCCCccCcCCCCcccCCCHHHHHHhceeEEEEECC
Confidence 999999999999999999999999999999999998777889999999999999 75 9999999999999998764
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=5.1e-81 Score=670.69 Aligned_cols=421 Identities=16% Similarity=0.209 Sum_probs=372.7
Q ss_pred EEecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHHH
Q 009035 96 HVAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLFR 175 (546)
Q Consensus 96 ~v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~ 175 (546)
.++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+||+..+++..+...+++.+.
T Consensus 5 ~~~~~~~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~ 82 (464)
T 3k9d_A 5 DKDLRSIQEVRNLIESANKAQK--ELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVY 82 (464)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHH
Confidence 3455678999999999999999 89999999999999999999999999999999999999988876444444444443
Q ss_pred HHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHH----
Q 009035 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSK---- 251 (546)
Q Consensus 176 ~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~---- 251 (546)
++.... +..+. .+.+.+...++.++|+|||++|+|||||+.+.++++++||++||+||+|||+.+|+++..+++
T Consensus 83 ~~~~~~-~~~g~-~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 83 NYIKDM-KTIGM-LKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp HHHTTC-CCSEE-EEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhcc-cccce-eccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 333221 11111 122345667889999999999999999999999999999999999999999999999998654
Q ss_pred HHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecC-CcCcEEEecCCCHHH
Q 009035 252 LLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELG-GKSPFIVCEDADVDK 330 (546)
Q Consensus 252 ~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelg-G~~p~iV~~dADl~~ 330 (546)
++.++|+|+|++|+|++.+.+.++.|+.||+||+|+||||+.+ .+.++. ++||+ +|+| ||+|+||++|||++.
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~-~~kpv-lelG~G~~p~iV~~dADl~~ 234 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYS-SGTPA-IGVGPGNGPAFIERSANIPR 234 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTT-SSSCE-EEBCCCCCEEEECTTSCHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHh-cCCcE-EeeCCCCCeEEECCCCCHHH
Confidence 5688999999999999988899999999999999999999985 444454 78999 7888 999999999999999
Q ss_pred HHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhh-------hhcccCCCC-CCCCccccCCCHHHHHHHHHHH
Q 009035 331 AAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALA-------MKRVVGDPF-KGGIQQGPQIDSEQFEKILKYI 402 (546)
Q Consensus 331 a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~-------~~~~vG~p~-~~~~~~Gpl~~~~~~~~~~~~i 402 (546)
|++.+++++|+|+||.|+++++||||+++||+|+++|+++. +.+++|+|. ++++++||+++.++++++.+++
T Consensus 235 Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~ 314 (464)
T 3k9d_A 235 AVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA 314 (464)
T ss_dssp HHHHHHHHHTGGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred HHHHHHHHHhcCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999986 467899998 7899999999999999999999
Q ss_pred HHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHH----HHHHcCCCCceEEEEc
Q 009035 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVI----QRSNASQYGLAAGVFT 478 (546)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai----~~~N~~~~gL~a~v~t 478 (546)
+.++.+|+++++||.. ++++++++. +|+||||++|++|+|+|||| +++|+++|||+++|||
T Consensus 315 ~~a~~~ga~vl~gg~~--------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t 379 (464)
T 3k9d_A 315 GLTVPADARVLIAEET--------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHS 379 (464)
T ss_dssp TCCCCTTCCEEEEECC--------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEEC
T ss_pred hhhhcCCCEEEEcCCC--------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEe
Confidence 9999999999999863 456788865 79999999999999999997 7999999999999999
Q ss_pred CCHHHHHHHHHHhceeEEEEcCCCC---------CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCCC
Q 009035 479 HNLDTANTLMRALRVGSVWINCFDV---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKN 542 (546)
Q Consensus 479 ~d~~~a~~~~~~l~~g~V~iN~~~~---------~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~~ 542 (546)
+|.++++++++++++|+||||+++. ..+.+|||| +.+|.|.++|..++++|++.|+|..+.++
T Consensus 380 ~d~~~a~~~~~~l~~G~v~vN~~~~~~~~g~~~~~~~~~~~G~-G~~G~g~~~~~~~~~~~~~~k~v~~~~~~ 451 (464)
T 3k9d_A 380 EDKEIIREFALKKPVSRLLVNTPGALGGIGATTNLVPALTLGC-GAVGGSSSSDNIGPENLFNIRRIATGVLE 451 (464)
T ss_dssp SCHHHHHHHHHHSSEEEEEESSCHHHHHTTSSSSSCCCSCBBC-TGGGTCSCCSBCCGGGSEEEEEEEECCCC
T ss_pred CCHHHHHHHHHhCCEeEEEEECCccccccccCCCCCccccccC-cCCCCCcCCCCCCHHHheEEEEEEecCCc
Confidence 9999999999999999999999764 568899998 78999999999999999999999887643
No 49
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=2e-81 Score=672.61 Aligned_cols=395 Identities=17% Similarity=0.183 Sum_probs=327.9
Q ss_pred HHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCCh----hhhhhccchH-HHHHHHHHH
Q 009035 104 DVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQTEVPM-TTRLFRYYA 178 (546)
Q Consensus 104 dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~ev~~-~~~~l~~~a 178 (546)
.+++|+++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+|||. .++...|+.. ++..++|++
T Consensus 15 ~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a 92 (468)
T 1vlu_A 15 SSQQIAKNARKAGN--ILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVML 92 (468)
T ss_dssp HHHHHHHHHHHHHH--HHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHH
T ss_pred hHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHH
Confidence 47899999999999 8999999999999999999999999999999999999998 7775458998 999999999
Q ss_pred HHhhHhc------CcccCC---CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHH
Q 009035 179 GWADKIQ------GLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYV 249 (546)
Q Consensus 179 ~~a~~~~------~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l 249 (546)
.++++.. +...+. +.+...++.++|+|||++|+||| | .+.++++++||++||+||+|||+.+|+++..|
T Consensus 93 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l 170 (468)
T 1vlu_A 93 QGIKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREM 170 (468)
T ss_dssp HHHHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHH
T ss_pred HHHHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHH
Confidence 8887765 333221 12345689999999999999999 9 99999999999999999999999999999999
Q ss_pred HHHHH----H----cCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEE
Q 009035 250 SKLLH----E----AGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFI 321 (546)
Q Consensus 250 ~~~l~----~----aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~i 321 (546)
++++. + +|+|+|++|+|+ +++++++.|..||+||+|+||||+.+|+.|++.+ +||+++|+|||||+|
T Consensus 171 ~~l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~i 245 (468)
T 1vlu_A 171 AKIVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIY 245 (468)
T ss_dssp HHHHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEE
T ss_pred HHHHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceE
Confidence 99995 8 999999999999 6778899999999999999999999999998765 689999999999999
Q ss_pred EecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhccc---CCCCCCCCccccCCCHHHHHHH
Q 009035 322 VCEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKI 398 (546)
Q Consensus 322 V~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~v---G~p~~~~~~~Gpl~~~~~~~~~ 398 (546)
|++|||+|.|++.+++++|+|+| .|++++|||||+++ |+|+++|+++++++++ |||.+
T Consensus 246 V~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------- 306 (468)
T 1vlu_A 246 LDEDADLIKAKRISLDAKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------- 306 (468)
T ss_dssp ECTTCCHHHHHHHHHHTTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------
T ss_pred ECCCCCHHHHHHHHHHHhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------
Confidence 99999999999999999999999 99999999999999 9999999999999987 88743
Q ss_pred HHH-HHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEE
Q 009035 399 LKY-IRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVF 477 (546)
Q Consensus 399 ~~~-i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~ 477 (546)
.++ |++++ ++++||. | ++||++ ++++|++++||+||||++|++|+|+||||+++|+++|||+++||
T Consensus 307 ~~~~i~~a~----~~~~gG~-----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~ 373 (468)
T 1vlu_A 307 KTAYFDKLN----ELGKLTE-----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIV 373 (468)
T ss_dssp HHHHHHHHH----HHTCCCH-----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEE
T ss_pred hcccccccc----eeeccCC-----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEE
Confidence 345 66665 4677775 4 789997 78899999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHhceeEEEEcCCCCCCCCCCcc-----CCCCCCCCCcchHHHHHhhheeeEEEEeC
Q 009035 478 THNLDTANTLMRALRVGSVWINCFDVFDAAIPFG-----GYKQSGQGREKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 478 t~d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfg-----G~k~SG~g~~~g~~~l~~~~~~k~v~~~~ 540 (546)
|+|.++++++++++++|+||||+++...+.+||| |+|.||+|++ |.+++++|++.|+|+.+.
T Consensus 374 t~d~~~a~~~~~~l~aG~V~vN~~~~~~~~~pfG~Gg~~G~~~SG~g~~-G~~gl~~f~~~K~v~~~~ 440 (468)
T 1vlu_A 374 TENKANAEKFMKGVDSSGVYWNASTRFADGFRYGFGAEVGISTSKIHAR-GPVGLDGLVSYQYQIRGD 440 (468)
T ss_dssp CSCHHHHHHHHHHCCCSEEEESSCGGGCC-----------------------CCSGGGEEEEEEEECS
T ss_pred eCCHHHHHHHHHhCCeeEEEEcCCCCCCCCCCCCCCCCcceecCCCCCC-cchHHHHhcceEEEEECC
Confidence 9999999999999999999999987777889999 9999999999 999999999999998764
No 50
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=1.2e-78 Score=648.52 Aligned_cols=389 Identities=20% Similarity=0.225 Sum_probs=336.0
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChh----hhhh-------ccchHH
Q 009035 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFE----QSAQ-------TEVPMT 170 (546)
Q Consensus 102 ~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~----~a~~-------~ev~~~ 170 (546)
.+|+++++++|++||+ .|+.++..+|.++|+++++.|+++.++|++++++|+||+.. ++.. .|+..+
T Consensus 25 ~~~v~~av~~A~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~ 102 (444)
T 4ghk_A 25 DQYMTDVGRRARRASR--SIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTM 102 (444)
T ss_dssp HHHHHHHHHHHHHHHH--HHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHH
T ss_pred HHHHHHHHHHHHHHHH--HhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHH
Confidence 5899999999999999 89999999999999999999999999999999999999853 4432 378889
Q ss_pred HHHHHHHHHHhhHhcCcccCC---CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHH
Q 009035 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (546)
Q Consensus 171 ~~~l~~~a~~a~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~ 247 (546)
++.++|++.+++.. +...+. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.
T Consensus 103 ~~~l~~~a~~~~~~-g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~ 179 (444)
T 4ghk_A 103 VEGLRQVATLPDPI-GEMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNT 179 (444)
T ss_dssp HHHHHHHHHSCCCT-TCEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHH
T ss_pred HHHHHHHHhhcccc-CccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHH
Confidence 99999999887542 333321 23456789999999999999998 8 588999999999999999999999999999
Q ss_pred HHHHHH----HHcCCCCCcEEEEeCCch-hHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEE
Q 009035 248 YVSKLL----HEAGLPPGVLNIVSGYGP-TAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (546)
Q Consensus 248 ~l~~~l----~~aGlP~gvv~vv~g~~~-~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV 322 (546)
.|++++ .++|+|+|++|+|+|.+. ++++.|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 180 ~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV 255 (444)
T 4ghk_A 180 ALAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYV 255 (444)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEE
Confidence 999997 799999999999998655 5888898999999999999999999998764 6899999999999999
Q ss_pred ecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhccc---CCCCCCCCccccCCCHHHHHHHH
Q 009035 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVV---GDPFKGGIQQGPQIDSEQFEKIL 399 (546)
Q Consensus 323 ~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~v---G~p~~~~~~~Gpl~~~~~~~~~~ 399 (546)
++|||+|.|++.+++++|+|+| .|++++|||||+++||+|+++|+++++++++ |+|.+ .
T Consensus 256 ~~dADl~~Aa~~i~~~~~~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~-----------------~ 317 (444)
T 4ghk_A 256 DDRASVTKALTVCDNAKTHRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDADA-----------------R 317 (444)
T ss_dssp CTTCCHHHHHHHCC----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHH-----------------H
T ss_pred CCCCCHHHHHHHHHHHhcCCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHH-----------------H
Confidence 9999999999999999999999 9999999999999999999999999999888 76531 3
Q ss_pred HHHHHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcC
Q 009035 400 KYIRSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTH 479 (546)
Q Consensus 400 ~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~ 479 (546)
++|+++. . | ++ ++++|++++||+||||++|++|+|+||||+++|+++|||++||||+
T Consensus 318 ~~i~~a~-~--------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~ 374 (444)
T 4ghk_A 318 AVLEAAG-V--------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTE 374 (444)
T ss_dssp HHHHHTT-C--------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECS
T ss_pred HHHHhcc-c--------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeC
Confidence 5666542 1 2 22 3567899999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhhheeeEEEEeC
Q 009035 480 NLDTANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 480 d~~~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g----~~~g~~~l~~~~~~k~v~~~~ 540 (546)
|.++++++++++++|+||||+++.+.+.+||||.|.||+| +++|++|+++||+.|+|++..
T Consensus 375 d~~~a~~~a~~l~aG~V~vN~~~~~~~~~pfGg~~~sG~g~~~~~~~G~~gl~~~t~~K~v~~~~ 439 (444)
T 4ghk_A 375 DHDRAMRFLREVDSASVMVNASTRFADGFEFGLGAEIGISNDKLHARGPVGLEGLTSLKYVVLGH 439 (444)
T ss_dssp BHHHHHHHHHHCCSSEEEEEECGGGCSTTTTTCSCCSEEECCSSSCCEEECGGGGEEEEEEEEEE
T ss_pred CHHHHHHHHHhCCcceEEEcCCCccCCCCCcCCcccccccCCcccCCChhHHHhhceEEEEEECC
Confidence 9999999999999999999998888889999999999998 789999999999999998764
No 51
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=1.1e-78 Score=645.74 Aligned_cols=387 Identities=21% Similarity=0.226 Sum_probs=345.4
Q ss_pred HHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCCh----hhhhh-------ccchHH
Q 009035 102 AEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPF----EQSAQ-------TEVPMT 170 (546)
Q Consensus 102 ~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~~~ 170 (546)
.+++++++++|++||+ .|+.+|..+|.++|++++++|+++.++|++++++|+||+. .++.. .|+..+
T Consensus 13 ~~~~~~av~aA~~A~~--~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~ 90 (427)
T 1o20_A 13 MDELLEKAKKVREAWD--VLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEM 90 (427)
T ss_dssp -CHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHH--HHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHH
Confidence 5689999999999999 8999999999999999999999999999999999999885 44431 489999
Q ss_pred HHHHHHHHHHhhHhcCcccCC---CCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHH
Q 009035 171 TRLFRYYAGWADKIQGLTAPA---DGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSAL 247 (546)
Q Consensus 171 ~~~l~~~a~~a~~~~~~~~~~---~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~ 247 (546)
++.++||+.++++ .+...+. +.+...++.++|+|||++|+||| +.+.++++++||++||+||+|||+.+|+++.
T Consensus 91 ~~~l~~~a~~~~~-~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 91 IKACETVIGLKDP-VGEVIDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHHSCCC-TTCEEEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHHhcccc-cCccccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 9999999988765 3433221 22445688999999999999886 4788999999999999999999999999999
Q ss_pred HHHHHHH----HcCCCCCcEEEEeCC-chhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEE
Q 009035 248 YVSKLLH----EAGLPPGVLNIVSGY-GPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIV 322 (546)
Q Consensus 248 ~l~~~l~----~aGlP~gvv~vv~g~-~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV 322 (546)
.|++++. ++|+|+|++|+|+|. +++.++.|..||+||+|+||||+.+|+.|++.+ +||+++|||||||+||
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV 243 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFV 243 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEE
Confidence 9999998 679999999999984 567889999999999999999999999998876 5899999999999999
Q ss_pred ecCCCHHHHHHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHH
Q 009035 323 CEDADVDKAAELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYI 402 (546)
Q Consensus 323 ~~dADl~~a~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i 402 (546)
++|||+|.|++.+++++|.|+| .|++++|||||+++||+|+++|++++++++++
T Consensus 244 ~~dADl~~Aa~~i~~~~f~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 244 DESADLKKAVPVIINAKTQRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp CTTSCHHHHHHHHHHHHHSCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred eCCCCHHHHHHHHHHHhccCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 9999999999999999999999 99999999999999999999999999887652
Q ss_pred HHHHhCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHH
Q 009035 403 RSGVDGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLD 482 (546)
Q Consensus 403 ~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~ 482 (546)
+.||... .+ |+ ||| ++++|.+++||+||||++|++|+|+||||+++|+++|||+++|||+|.+
T Consensus 298 ----------~~gg~~~--~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~ 360 (427)
T 1o20_A 298 ----------VRGCEKT--RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYS 360 (427)
T ss_dssp ----------EEECHHH--HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHH
T ss_pred ----------eecChhh--hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHH
Confidence 1233321 12 33 886 3467899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhceeEEEEcCCCCCCCCCCccCCCCCCCC----CcchHHHHHhhheeeEEEEeC
Q 009035 483 TANTLMRALRVGSVWINCFDVFDAAIPFGGYKQSGQG----REKGSYSLSNYLQVKAVVTAL 540 (546)
Q Consensus 483 ~a~~~~~~l~~g~V~iN~~~~~~~~~pfgG~k~SG~g----~~~g~~~l~~~~~~k~v~~~~ 540 (546)
+++++++++++|+||||++....+.+||||.|.||+| +++|++|+++|++.|+|+.+.
T Consensus 361 ~a~~~~~~l~~G~V~iN~~~~~~~~~pfGg~~~SG~g~~~~~~~g~~gl~~~~~~k~v~~~~ 422 (427)
T 1o20_A 361 NAKKFVSEIDAAAVYVNASTRFTDGGQFGFGAEIGISTQRFHARGPVGLRELTTYKFVVLGE 422 (427)
T ss_dssp HHHHHHHHCCSSEEEESSCGGGCSTTTTTCSCCSCEECSSSSCCEECCTGGGEEEEEEEECS
T ss_pred HHHHHHHhCCccEEEECCCCccCCCCCCCCcccccccCCcccCCChHHHHHHhceEEEEECC
Confidence 9999999999999999998777788999999999997 578999999999999998764
No 52
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=3e-77 Score=639.43 Aligned_cols=419 Identities=17% Similarity=0.233 Sum_probs=350.4
Q ss_pred EecCCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHHHhcCCChhhhhhccchHHHHHH-H
Q 009035 97 VAEGEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALETWDNGKPFEQSAQTEVPMTTRLF-R 175 (546)
Q Consensus 97 v~~~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l-~ 175 (546)
++.++.+|+++++++|++||+ .|+.++.++|.++|+++++.|+++.++|++++++|+|||+.+++..|+..+.+.+ +
T Consensus 1 ~~~a~~~~v~~av~~A~~A~~--~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~ 78 (452)
T 3my7_A 1 MPVTNMAELDAMIARVKKAQE--EFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN 78 (452)
T ss_dssp -CCSSHHHHHHHHHHHHHHHH--HHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH
Confidence 467889999999999999999 8999999999999999999999999999999999999999998765676677666 4
Q ss_pred HHHHHhhHhcCcccCCCCCCceeeeeccceeEEEEcCccchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHH-
Q 009035 176 YYAGWADKIQGLTAPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLH- 254 (546)
Q Consensus 176 ~~a~~a~~~~~~~~~~~~~~~~~~~~~P~GVv~~i~p~n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~- 254 (546)
+++.. +..+ ..+.+.+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 79 ~~~~~--~~~g-~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~ 155 (452)
T 3my7_A 79 KYKDE--QTCG-ILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLD 155 (452)
T ss_dssp HHTTC--CCSE-EC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred Hhhhc--cccc-cccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHH
Confidence 44321 1112 1222334457889999999999999999999999999999999999999999999999998888775
Q ss_pred ---HcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHH
Q 009035 255 ---EAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKA 331 (546)
Q Consensus 255 ---~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a 331 (546)
++|+|+|++|+|++.+.+.++.|+.||+|++|+||||+.+++ .++. ++||+++|+|||+|+||++|||++.|
T Consensus 156 a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~~----~a~~-~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 156 AAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMVK----AAYS-SGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHHH----HHHT-SSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHHH----HHHh-cCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 789999999999998889999999999999999999998654 3444 78999999999999999999999999
Q ss_pred HHHHHHHHhccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCe
Q 009035 332 AELAHYALFFNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAK 411 (546)
Q Consensus 332 ~~~i~~~~f~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~ 411 (546)
++.+++++|+|+||.|+++++||||+++||+|+++|+++ .||+++.++++++.++|+++...|++
T Consensus 231 a~~iv~s~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGGGGGGCCTTCEEEEEEEGGGHHHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHhCCCCCccCCCcEEEEcHHHHHHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999999999999999999999999999999885 39999999999999999877667777
Q ss_pred EecCCccc---CCCCceeccee-------eccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCC----CCceEEEE
Q 009035 412 LETGGERL---GAKGYYIKPTV-------FTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ----YGLAAGVF 477 (546)
Q Consensus 412 v~~gg~~~---~~~g~~~~Ptv-------~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~----~gL~a~v~ 477 (546)
+ +||... ...|+|++||+ +.++++++++++ |+||||++|++|+|+||||+++|++. |||+++||
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~ 373 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLY 373 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEE
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEE
Confidence 6 476532 23689999998 778999999876 89999999999999999999999985 99999999
Q ss_pred cCCHHHHHH---HHHHhceeEEEEcCCCCCC-----------CCCCccCCCCCCCCCcchHHHHHhhheeeEEEEeCCCC
Q 009035 478 THNLDTANT---LMRALRVGSVWINCFDVFD-----------AAIPFGGYKQSGQGREKGSYSLSNYLQVKAVVTALKNP 543 (546)
Q Consensus 478 t~d~~~a~~---~~~~l~~g~V~iN~~~~~~-----------~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~~~~~~~ 543 (546)
|+|.+++++ +++++++|+|+||+++.+. +.+++ |++..|.+..++.-+.+++.+.|+|..+.+|+
T Consensus 374 t~d~~~a~~i~~~a~~l~~G~V~VN~~~~~Gg~G~~~~f~~~~~~t~-g~g~~Gg~~~~~nv~~~~l~n~~~v~~~~~~~ 452 (452)
T 3my7_A 374 TNQDVNADRIRYFGDKMKTARILINIPTTHGGIGDLYNFNVAPSLTL-GCGSWGGNSISENVGPKHLINKKTVAKRAENM 452 (452)
T ss_dssp SCTTTCHHHHHHHHHHCCCSEEEESCCCC-----------------------------CCCCCGGGGEEEEEEECCC---
T ss_pred cCCHHHHHHHHHHHHhCCEEEEEECCCCCCcccccccccCcCceEee-eccccCCCccCCCCChhHeeeeeEEEeecCCC
Confidence 999888777 9999999999999976542 22333 45666767777888899999999999888774
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=97.33 E-value=0.19 Score=51.60 Aligned_cols=265 Identities=16% Similarity=0.192 Sum_probs=147.3
Q ss_pred CCCceeeeeccceeEEEEcCc---cchHHHHHHHHHHHhhcCCeE-EE-ecCCCChHHHHHHHHHHHHcCCCCCcEEEEe
Q 009035 193 GPYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTI-VL-KTAEQTPLSALYVSKLLHEAGLPPGVLNIVS 267 (546)
Q Consensus 193 ~~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~V-Vl-kps~~~p~t~~~l~~~l~~aGlP~gvv~vv~ 267 (546)
.+......+.|+--|++..|. .||-..++ ..+||..+|+.= |+ -|++.. .....+.-..+.+|+.+ +..
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~ypSsvLM-~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~e----Iy~ 192 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYPSSVLM-NAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVDR----VFR 192 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCHHHHHH-HHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCCE----EEC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchhhHHHH-hhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCcE----EEE
Confidence 455667889999999999994 46655555 578999999973 33 333221 11122333344566653 333
Q ss_pred CCchhHHHHHHc----CCCccEEEecCCchHHHHHHHHHhhcCCcceEeec-CCcCc-EEE-ecCCCHHHHHHHHHHHHh
Q 009035 268 GYGPTAGAALAS----HMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSP-FIV-CEDADVDKAAELAHYALF 340 (546)
Q Consensus 268 g~~~~~~~~L~~----~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lel-gG~~p-~iV-~~dADl~~a~~~i~~~~f 340 (546)
-.|...-.+|.- -|.||+|+=.|..=+..+ +..-. + .|-..+ .|.+= +|| ++.+|.+..+..++.-+=
T Consensus 193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~A--Kr~v~-g--~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAE 267 (423)
T 4gic_A 193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVATA--KKLVF-G--QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAE 267 (423)
T ss_dssp CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHH--HHHHB-T--TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHT
T ss_pred cCChhhhhhhccCCCcccceeEEecCCcHHHHHH--HHHhc-C--CcCcccccccceEEEEeCCCCCHHHHHHHHHHhhc
Confidence 335555455553 678999999988765432 22211 1 122222 23333 333 445899988776665554
Q ss_pred ccCCCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccC
Q 009035 341 FNQGQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLG 420 (546)
Q Consensus 341 ~~~GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~ 420 (546)
+... .+.++|..+ ++|.++..+.+.++--. +...+ .++.+..+
T Consensus 268 Hd~~-----a~~iLvT~s--~~la~~V~~~i~~~l~~-----------l~r~~-------i~~~sl~~------------ 310 (423)
T 4gic_A 268 HDED-----AQAILISPD--AAHLEAVQASIERLLPG-----------MERAE-------VIRTSLER------------ 310 (423)
T ss_dssp TCTT-----CEEEEEESC--HHHHHHHHHHHHHHGGG-----------CTTHH-------HHHHHHHH------------
T ss_pred cCCC-----CeEEEEeCc--HHHHHHHHHHHHHHHhh-----------CccHH-------HHHHHHhc------------
Confidence 4432 334666655 44555554444331100 00111 11111110
Q ss_pred CCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHhc-eeEEEEc
Q 009035 421 AKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRALR-VGSVWIN 499 (546)
Q Consensus 421 ~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~-~g~V~iN 499 (546)
+| .++.++|++|+++++|..-.= ..-|.++|.. .+..+++ +|.|++.
T Consensus 311 -------------------------~g---~ii~v~~~~ea~~~~N~~APE-HLel~~~~~~---~~l~~i~nAGaIFlG 358 (423)
T 4gic_A 311 -------------------------RG---GMILVDDLEQAAAVANRIAPE-HLELSVESPE---VLVESIRNAGAIFMG 358 (423)
T ss_dssp -------------------------HC---EEEECSSHHHHHHHHHHHCCS-EEEEESSCHH---HHGGGCCCCSEEEEC
T ss_pred -------------------------Cc---eEEEEeehHHHHHHHHhhChH-HhhhhhCCHH---HHHhhCcEeceeecC
Confidence 11 355689999999999986444 6778899865 5777774 9999998
Q ss_pred CCCCC--CCC--CCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 500 CFDVF--DAA--IPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 500 ~~~~~--~~~--~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
.++.. ..+ -|=.=...+|..|+.+.-+++.|++..++.
T Consensus 359 ~~tp~~~GDY~aG~NHvLPT~G~Ar~~sgLsv~~F~K~~s~~ 400 (423)
T 4gic_A 359 RYTAEALGDYCAGPNHVLPTSGTARFSSPLGVYDFQKRSSLI 400 (423)
T ss_dssp ----------------CCCCTTGGGTCCCCCGGGGEEEEEEE
T ss_pred CCCchhhhhcCcCCCccCCCCCcccccCCCCHHHeeeeeeEE
Confidence 76431 111 011112345666777777888898887654
No 54
>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A
Probab=95.81 E-value=2.1 Score=44.06 Aligned_cols=260 Identities=18% Similarity=0.187 Sum_probs=148.7
Q ss_pred CCceeeeeccceeEEEEcCc---cchHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCc
Q 009035 194 PYHVQTLHEPIGVAGQIIPW---NFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYG 270 (546)
Q Consensus 194 ~~~~~~~~~P~GVv~~i~p~---n~P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~ 270 (546)
|......+.|+--|++..|. -||-..++ ..+||-.+|+.=|+-.+|-. ....+.-..+.+|..+ |..-.|
T Consensus 114 Gv~~gq~~~Pi~rvGlYVPGG~a~ypSsvLM-~aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~e----Iy~vGG 186 (434)
T 1kae_A 114 GVRCQQVTRPVASVGLYIPGGSAPLFSTVLM-LATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQD----VFNVGG 186 (434)
T ss_dssp TEEEEEEEEECSEEEEECCCSSSCCTHHHHH-HHHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCCE----EEECCH
T ss_pred CcEEEEEEeehheEEEEecCCCCCchhHHHH-hhccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCCE----Eeeccc
Confidence 44566788999999999996 46654444 57899999987654332211 1122233345566663 333224
Q ss_pred hhHHHHHH----cCCCccEEEecCCchHHHHHHHHHhhcCCcceEeec-CCcCcEEE--ecCCCHHHHHHHHHHHHhccC
Q 009035 271 PTAGAALA----SHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPVTLEL-GGKSPFIV--CEDADVDKAAELAHYALFFNQ 343 (546)
Q Consensus 271 ~~~~~~L~----~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv~lel-gG~~p~iV--~~dADl~~a~~~i~~~~f~~~ 343 (546)
...-.+|. +-|+||+|+=.|..=+.- ++..-......|-..+ .|.+=++| +++||.+..+..++.-+=+..
T Consensus 187 AQAIAAlAyGTetIp~VDkI~GPGN~yVa~--AKr~Vs~~~G~VgIDm~AGPSEilViAD~tAnp~~vAaDLLsQAEHd~ 264 (434)
T 1kae_A 187 AQAIAALAFGTESVPKVDKIFGPGNAFVTE--AKRQVSQRLDGAAIDMPAGPSEVLVIADSGATPDFVASDLLSQAEHGP 264 (434)
T ss_dssp HHHHHHHHHCCSSSCCCSEEECCCCHHHHH--HHHHHHHCTTSCEESCCCCCCEEEEEECTTSCHHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHcCCCCCCCccEEECCCcHHHHH--HHHHhHhhcCccccCCCCCCceEEEEeCCCCCHHHHHHHHHHHhccCC
Confidence 44444444 258899999888865432 1111100011222222 23333333 456899988776665554432
Q ss_pred CCcccCCCeEEEcccchHHHHHHHHHhhhhcccCCCCCCCCccccCCCHHHHHHHHHHHHHHHhCCCeEecCCcccCCCC
Q 009035 344 GQCCCAGSRTFVHESVYDQFVEKANALAMKRVVGDPFKGGIQQGPQIDSEQFEKILKYIRSGVDGGAKLETGGERLGAKG 423 (546)
Q Consensus 344 GQ~C~a~~~v~V~~~v~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpl~~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g 423 (546)
. .+.++|..+ +++.++..+.+.++--.-| .. +.++.
T Consensus 265 ----~-a~aiLvT~s--~~la~~V~~ev~~ql~~lp-----------r~-------~ia~~------------------- 300 (434)
T 1kae_A 265 ----D-SQVILLTPA--ADMARRVAEAVERQLAELP-----------RA-------ETARQ------------------- 300 (434)
T ss_dssp ----T-CEEEEEESC--HHHHHHHHHHHHHHHTTCT-----------TH-------HHHHH-------------------
T ss_pred ----C-CcEEEEECC--HHHHHHHHHHHHHHHHhCC-----------hH-------HHHHH-------------------
Confidence 2 334666555 4445444444432110000 00 11111
Q ss_pred ceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHHh-ceeEEEEcCCC
Q 009035 424 YYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQYGLAAGVFTHNLDTANTLMRAL-RVGSVWINCFD 502 (546)
Q Consensus 424 ~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l-~~g~V~iN~~~ 502 (546)
-+..- .|+.++|++||++++|..-.= ..-|.++|.. .+..++ ++|.|++..++
T Consensus 301 ---------------------sl~~~-~ii~v~~l~ea~~~~N~~APE-HLel~~~dp~---~~l~~I~nAGaIFlG~~t 354 (434)
T 1kae_A 301 ---------------------ALNAS-RLIVTKDLAQCVEISNQYGPE-HLIIQTRNAR---ELVDSITSAGSVFLGDWS 354 (434)
T ss_dssp ---------------------HHTTC-EEEECSSHHHHHHHHHHHCCS-EEEEESTTHH---HHGGGCCSCSEEEESTTC
T ss_pred ---------------------HHHcC-eEEEECCHHHHHHHHHHhhhH-hhhhhhcCHH---HHHhhcCcccchhcCCCC
Confidence 11122 466789999999999986544 6788899964 666777 59999999875
Q ss_pred C---------CCCCCCccCCCCCCCCCcchHHHHHhhheeeEEE
Q 009035 503 V---------FDAAIPFGGYKQSGQGREKGSYSLSNYLQVKAVV 537 (546)
Q Consensus 503 ~---------~~~~~pfgG~k~SG~g~~~g~~~l~~~~~~k~v~ 537 (546)
. .++-+|- +|..|+.+.-+++.|++..++.
T Consensus 355 pe~~GDY~aG~NHvLPT-----~G~AR~~sgLsV~~F~K~~s~~ 393 (434)
T 1kae_A 355 PESAGDYASGTNHVLPT-----YGYTATCSSLGLADFQKRMTVQ 393 (434)
T ss_dssp CHHHHHHTSSSCCCCCC-----TTGGGTCCCSCGGGGEEEEEEE
T ss_pred chhhcccccCCCcccCC-----CCceeccCCCcHHhccceeeEE
Confidence 4 1233555 4556677777888898887764
No 55
>3lap_A Arginine repressor; arginine repressor, DNA binding, DNA-canavanine ternary complex; HET: GGB; 2.15A {Mycobacterium tuberculosis} PDB: 3fhz_A* 3ere_D* 3laj_A*
Probab=74.22 E-value=29 Score=30.98 Aligned_cols=119 Identities=18% Similarity=0.179 Sum_probs=63.4
Q ss_pred HHHHHHHHHH----cHHHHHHHHHHhcCCChhhhhhccchHHHHHHHHHHHHhhHhcCcccCCCCCCc-eeeeeccceeE
Q 009035 133 ILRFADLLER----HNDEIAALETWDNGKPFEQSAQTEVPMTTRLFRYYAGWADKIQGLTAPADGPYH-VQTLHEPIGVA 207 (546)
Q Consensus 133 L~~~a~~l~~----~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~a~~~~~~~~~~~~~~~-~~~~~~P~GVv 207 (546)
..++.++|.+ ..+||++++..+ |-...++.. ....+++.-...+...+.. .|......+..
T Consensus 22 ~~~I~~iI~~~~I~tQeEL~~~L~~~-Gi~vTQATl-------------SRDikEL~lvKv~~~~G~~~~Y~lp~~~~~~ 87 (170)
T 3lap_A 22 QARIVAILSSAQVRSQNELAALLAAE-GIEVTQATL-------------SRDLEELGAVKLRGADGGTGIYVVPEDGSPV 87 (170)
T ss_dssp HHHHHHHHHHSCCCSHHHHHHHHHHT-TCCCCHHHH-------------HHHHHHHTCEEECCTTCTTCEEECCC-----
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHc-CCCcCchhH-------------HHHHHHcCcEEeecCCCCEEEEEECcccccc
Confidence 4455566665 478999988765 766655532 2223333333334333433 34332211111
Q ss_pred EEEcCccchHHHHHH-HHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 009035 208 GQIIPWNFPLLMFAW-KVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (546)
Q Consensus 208 ~~i~p~n~P~~~~~~-~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~ 269 (546)
-....+.-.+...+. .+...-..||-+|+|..|-. +..++.++...++| +++..|.|+
T Consensus 88 ~~~~~~~~~l~~~l~~~v~sv~~~~nlvVikT~PG~---A~~vA~~iD~~~~~-eIlGTIAGD 146 (170)
T 3lap_A 88 RGVSGGTDRMARLLGELLVSTDDSGNLAVLRTPPGA---AHYLASAIDRAALP-QVVGTIAGD 146 (170)
T ss_dssp -CCTTHHHHHHHHHHHHCCEEEEETTEEEEECSTTC---HHHHHHHHHHHTCT-TEEEEEECS
T ss_pred cccccHHHHHHHHHHHheeEEeecCCEEEEEeCCCc---HHHHHHHHHhCCCC-CeEEEEecC
Confidence 000001111111111 12223346999999998766 78899999998777 688888874
No 56
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=69.04 E-value=35 Score=30.70 Aligned_cols=38 Identities=24% Similarity=0.445 Sum_probs=33.2
Q ss_pred hcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 009035 229 ACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (546)
Q Consensus 229 aaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~ 269 (546)
.+||-+|+|..|-. +..++.++...++|++++..|.|+
T Consensus 115 ~~~nlvVIkT~PG~---A~~vA~~ID~~~~~e~IlGTIAGD 152 (180)
T 3v4g_A 115 HNQALVVIHTGPGA---AQLIARMLDSLGKSEGILGVVAGD 152 (180)
T ss_dssp ECSSCEEEEESTTC---HHHHHHHHHHHCGGGTEEEEEECS
T ss_pred ecCCEEEEEeCCCc---HHHHHHHHHhCCCCCCeEEEEecC
Confidence 47999999998776 788999999988999999999884
No 57
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=63.08 E-value=13 Score=30.04 Aligned_cols=61 Identities=18% Similarity=0.348 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHHHHHH-hCCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcCC
Q 009035 391 DSEQFEKILKYIRSGV-DGGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNASQ 469 (546)
Q Consensus 391 ~~~~~~~~~~~i~~a~-~~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~~ 469 (546)
+.+.+++..+.+.... +.|++++..|.. |.++.+.. .+-+.|+.|+|.++|.+..|+.+
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~---------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s~~ 75 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS---------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNSPE 75 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC---------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHSHH
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC---------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcCHH
Confidence 4445555444444444 357787775542 34554321 23678999999999999998765
Q ss_pred CC
Q 009035 470 YG 471 (546)
Q Consensus 470 ~g 471 (546)
|.
T Consensus 76 Yq 77 (99)
T 2fiu_A 76 YQ 77 (99)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 58
>1b4a_A Arginine repressor; helix turn helix; 2.50A {Geobacillus stearothermophilus} SCOP: a.4.5.3 d.74.2.1 PDB: 1f9n_A
Probab=59.06 E-value=53 Score=28.52 Aligned_cols=36 Identities=25% Similarity=0.371 Sum_probs=30.7
Q ss_pred cCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 009035 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (546)
Q Consensus 230 aGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~ 269 (546)
.+|-+|+|..|-. +..++.++...++|+ ++..|.|+
T Consensus 90 ~~n~vVikT~PG~---A~~va~~iD~~~~~e-IlGTIAGD 125 (149)
T 1b4a_A 90 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 125 (149)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHTCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 6999999998765 788999999998876 88888874
No 59
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=54.35 E-value=23 Score=29.77 Aligned_cols=73 Identities=12% Similarity=0.176 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHHHhCCCeEecCCc-ccCCCCcee-----cceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHH
Q 009035 393 EQFEKILKYIRSGVDGGAKLETGGE-RLGAKGYYI-----KPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSN 466 (546)
Q Consensus 393 ~~~~~~~~~i~~a~~~Ga~v~~gg~-~~~~~g~~~-----~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N 466 (546)
+..+...+++++..+.|. ++.|+. .+...+..+ .|+|.++.-.+ ..|..|-+ .|+.++|.|||++++.
T Consensus 30 ~~~~~~~~~~~~l~~~G~-lv~g~~L~~~~~a~~Vr~~~g~~~VtdGPfaE----tkE~lgG~-~iie~~s~deA~e~A~ 103 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAGH-YIASHALQSVQTATTLRHQGGRLAMTDGPFAE----TKEQLGGF-YLIEARDLNQALQIAA 103 (124)
T ss_dssp HHHHHHHHHHHHHHHHTC-EEEEEECCCGGGCEEEEECSSCEEEEESCSSC----CSSEEEEE-EEEEESSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHCCE-EEecCcCCCCcceEEEEecCCceeEecCCCcC----CcccceeE-EEEEeCCHHHHHHHHH
Confidence 345666677777767774 333221 111122222 34555544333 23666654 5679999999999999
Q ss_pred cCCCC
Q 009035 467 ASQYG 471 (546)
Q Consensus 467 ~~~~g 471 (546)
+.++.
T Consensus 104 ~~P~~ 108 (124)
T 1s7i_A 104 KIPPG 108 (124)
T ss_dssp TCGGG
T ss_pred hCCcc
Confidence 88764
No 60
>3fxd_A Protein ICMQ; helix bundle, helix-turn-helix, unknown function; 2.10A {Legionella pneumophila} PDB: 3fxe_A
Probab=50.45 E-value=52 Score=23.43 Aligned_cols=47 Identities=17% Similarity=0.257 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHcHHHHHHHHH
Q 009035 100 GEAEDVNRAVSAARKAFDEGPWPRMTAYERSKIILRFADLLERHNDEIAALET 152 (546)
Q Consensus 100 ~~~~dv~~av~~A~~A~~~~~W~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~ 152 (546)
.+.++.++.+++--.|.+.|+|... .+|+-+...|++-+|.++..+.
T Consensus 5 lt~eq~~aILkaLdeaIe~GPWe~S------NFLRvIGKnL~eIRd~F~~~i~ 51 (57)
T 3fxd_A 5 LSDEQKETILKALNDAIEKGPWDKS------NFLRVIGKKLIAIRDRFLKRIG 51 (57)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCTTSC------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHcCCchHH------HHHHHHHHhHHHHHHHHHHHhc
Confidence 4567777777777788888899876 6788899999999999888764
No 61
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=43.85 E-value=11 Score=32.46 Aligned_cols=87 Identities=15% Similarity=0.125 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEe-CCchhHHHHHHcCCCccEEEecCC--
Q 009035 216 PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVS-GYGPTAGAALASHMEVDKLAFTGS-- 291 (546)
Q Consensus 216 P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~-aGlP~gvv~vv~-g~~~~~~~~L~~~~~v~~V~ftGs-- 291 (546)
+-...+.+-...|..|..++- |.-|+ +.|++ .|+|-..++=++ +..+.+++.+.+ ..|+.|+||=+
T Consensus 16 ~~~v~~a~~~~~ll~Gf~l~A-----T~gTa----~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~~-geIdlVInt~~pl 85 (134)
T 2xw6_A 16 EEMVAFCQRHREVLARFPLVA-----TGTTG----RRIEEATGLTVEKLLSGPLGGDQQMGARVAE-GRILAVIFFRDPL 85 (134)
T ss_dssp HHHHHHHHHTHHHHTTSCEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHHHHHHHHT-TCEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCEEEE-----ccHHH----HHHHHhhCceEEEEEecCCCCcchHHHHHHC-CCccEEEEccCcc
Confidence 333444444556667777664 33344 44555 799976666555 435667766665 58999999877
Q ss_pred -----chHHHHHHHHHhhcCCcceEee
Q 009035 292 -----TTTGKIVLQLAAKSNLKPVTLE 313 (546)
Q Consensus 292 -----~~~g~~i~~~aa~~~~~pv~le 313 (546)
..-+..|.+.+.. ..+|+..-
T Consensus 86 ~~~~h~~D~~~IrR~A~~-~~IP~~T~ 111 (134)
T 2xw6_A 86 TAQPHEPDVQALLRVCDV-HGVPLATN 111 (134)
T ss_dssp TCCTTSCCSHHHHHHHHH-HTCCEECS
T ss_pred cCCCccchHHHHHHHHHH-cCCCeEcC
Confidence 3356778888877 45676543
No 62
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=42.13 E-value=30 Score=29.70 Aligned_cols=63 Identities=11% Similarity=0.102 Sum_probs=44.6
Q ss_pred HHHHHHcCCCCCcEEEEeCC-c----hhHHHHHHcCCCccEEEecCCc-----hHHHHHHHHHhhcCCcceEeec
Q 009035 250 SKLLHEAGLPPGVLNIVSGY-G----PTAGAALASHMEVDKLAFTGST-----TTGKIVLQLAAKSNLKPVTLEL 314 (546)
Q Consensus 250 ~~~l~~aGlP~gvv~vv~g~-~----~~~~~~L~~~~~v~~V~ftGs~-----~~g~~i~~~aa~~~~~pv~lel 314 (546)
++.|++.|+|-..++-++.. . +.+.+.+.+ ..|+.|++|-+. .-+..|.+.+-. +.+|++..+
T Consensus 60 a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~-g~i~lVInt~~~~~~~~~d~~~iRR~Av~-~~IP~~T~~ 132 (143)
T 2yvq_A 60 SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRD-GSIDLVINLPNNNTKFVHDNYVIRRTAVD-SGIPLLTNF 132 (143)
T ss_dssp HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHT-TSCCEEEECCCCCGGGHHHHHHHHHHHHH-TTCCEECSH
T ss_pred HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHC-CCceEEEECCCCCCcCCccHHHHHHHHHH-hCCCeEcCH
Confidence 45667899997777665542 2 567776665 589999998766 267788888877 667877653
No 63
>1b4b_A Arginine repressor; core, oligomerization domain, helix TUR; HET: ARG; 2.20A {Geobacillus stearothermophilus} SCOP: d.74.2.1
Probab=41.75 E-value=46 Score=24.89 Aligned_cols=36 Identities=25% Similarity=0.371 Sum_probs=30.3
Q ss_pred cCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 009035 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (546)
Q Consensus 230 aGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~ 269 (546)
.+|-+|+|..|-. +..++.++.+.++|+ ++..+.|+
T Consensus 12 ~~n~vVikT~pG~---A~~va~~iD~~~~~e-I~GTIAGD 47 (71)
T 1b4b_A 12 TGNLLVLRTLPGN---AHAIGVLLDNLDWDE-IVGTICGD 47 (71)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEeeC
Confidence 6999999998665 788999999987776 88888874
No 64
>1vmd_A MGS, methylglyoxal synthase; TM1185, structural genomics, JCSG, P structure initiative, PSI, joint center for structural GENO lyase; 2.06A {Thermotoga maritima} SCOP: c.24.1.2
Probab=41.20 E-value=1.5e+02 Score=26.50 Aligned_cols=122 Identities=17% Similarity=0.067 Sum_probs=79.0
Q ss_pred eeeeeccc-eeEEEEcCccc-hHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-Cchh
Q 009035 197 VQTLHEPI-GVAGQIIPWNF-PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSG-YGPT 272 (546)
Q Consensus 197 ~~~~~~P~-GVv~~i~p~n~-P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~-aGlP~gvv~vv~g-~~~~ 272 (546)
.....-|. |.|+++..-+. +-...+.+-...|+.|..++- |.-|+ ++|.+ .|+|-..++=++. ..+.
T Consensus 19 ~~~~~lP~~g~V~lsv~D~dK~~lv~~ak~~~~lL~Gf~L~A-----T~gTa----~~L~e~~Gl~v~~v~k~~eGG~pq 89 (178)
T 1vmd_A 19 RYKIFMDKKKRIALIAHDRRKRDLLEWVSFNLGTLSKHELYA-----TGTTG----ALLQEKLGLKVHRLKSGPLGGDQQ 89 (178)
T ss_dssp EEEEEECSSCEEEEEECGGGHHHHHHHHHHSHHHHTTSEEEE-----CHHHH----HHHHHHHCCCCEECSCGGGTHHHH
T ss_pred ceeeeCCCCCEEEEEEehhhHHHHHHHHHHHHHHhcCCEEEE-----chHHH----HHHHHHhCceeEEEeecCCCCCch
Confidence 34444454 77777766554 445555666677778998875 33444 44555 7999655543332 2455
Q ss_pred HHHHHHcCCCccEEEecCC-------chHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCC
Q 009035 273 AGAALASHMEVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344 (546)
Q Consensus 273 ~~~~L~~~~~v~~V~ftGs-------~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~G 344 (546)
+++.+.+ ..|+.|+||=+ ..-+..|.+.+.. ..+|+..-+ ..++.++.+.+++..
T Consensus 90 I~d~I~~-geIdlVInt~dPl~~~~h~~D~~~IRR~A~~-~~IP~~Tnl---------------atA~A~v~ail~~~~ 151 (178)
T 1vmd_A 90 IGAMIAE-GKIDVLIFFWDPLEPQAHDVDVKALIRIATV-YNIPVAITR---------------STADFLISSPLMNDV 151 (178)
T ss_dssp HHHHHHT-TSCCEEEEECCSSSCCTTSCCHHHHHHHHHH-TTCCEESSH---------------HHHHHHHHSGGGGSC
T ss_pred HHHHHHC-CCccEEEEccCccCCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 6666655 58999999876 3467889998887 557766532 356677888877764
No 65
>2zfz_A Arginine repressor; DNA binding protein, core, oligomeriza domain, alpha/beta topology, structural genomics; HET: ARG; 1.85A {Mycobacterium tuberculosis} PDB: 3bue_A 3cag_A*
Probab=40.74 E-value=49 Score=25.29 Aligned_cols=36 Identities=33% Similarity=0.569 Sum_probs=30.4
Q ss_pred cCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 009035 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (546)
Q Consensus 230 aGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~ 269 (546)
++|-+|+|..|-. +..++.++.+.++|+ ++..|.|+
T Consensus 20 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 55 (79)
T 2zfz_A 20 SGNLAVLRTPPGA---AHYLASAIDRAALPQ-VVGTIAGD 55 (79)
T ss_dssp ETTEEEEECSTTC---HHHHHHHHHHHCCTT-EEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7999999988665 788999999987776 88888874
No 66
>3lo3_A Uncharacterized conserved protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.38A {Colwellia psychrerythraea} SCOP: d.58.4.0
Probab=38.06 E-value=50 Score=26.12 Aligned_cols=62 Identities=15% Similarity=0.206 Sum_probs=38.7
Q ss_pred CCHHHHHHHHHHHHHHHhC-CCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHcC
Q 009035 390 IDSEQFEKILKYIRSGVDG-GAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNAS 468 (546)
Q Consensus 390 ~~~~~~~~~~~~i~~a~~~-Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~~ 468 (546)
.+++.+++..+.+....++ |++++..| . +.++.+.. -..-+.|+.|+|.+.|.+..|+.
T Consensus 14 ~d~e~y~~Y~~~~~~~l~~~GG~~l~rg-~---------~~~lEG~~----------~~~~~viieFps~~aa~a~y~Sp 73 (94)
T 3lo3_A 14 KDAEKLQQYGARVASTLAKYSGEVLVKG-S---------VEQLHGKF----------EHKAQVILEFPSREDAYNWYHSE 73 (94)
T ss_dssp CCHHHHHHHHHHHHHHHHTTTCEEEEEE-E---------CEEEESCC----------CCSEEEEEEESSHHHHHHHHHSH
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEc-c---------cccccCCC----------CCCeEEEEECCCHHHHHHHHCCH
Confidence 3455555555555555443 77776655 3 23443321 12567899999999999999887
Q ss_pred CCC
Q 009035 469 QYG 471 (546)
Q Consensus 469 ~~g 471 (546)
+|.
T Consensus 74 eYq 76 (94)
T 3lo3_A 74 EYQ 76 (94)
T ss_dssp HHH
T ss_pred HHH
Confidence 664
No 67
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=36.94 E-value=21 Score=33.36 Aligned_cols=67 Identities=13% Similarity=0.139 Sum_probs=46.0
Q ss_pred HHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcCCCccEEEecCCchHH
Q 009035 221 AWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTG 295 (546)
Q Consensus 221 ~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g 295 (546)
+..++-.+.+||-||++.+.. -....+..+|... +|.|.+++++.+ ++- ...-..+.+.++.+...-
T Consensus 21 F~~l~~~vl~GnQiIVrg~~~--~~~~s~~~~L~~l-LP~~c~~l~~~s-~~Y----~~~~~cnilgls~~v~iP 87 (226)
T 3v42_A 21 FRMLAWHVLMGNQVIWKSRDV--DLVQSAFEVLRTM-LPVGCVRIIPYS-SQY----EEAYRCNFLGLSPHVQIP 87 (226)
T ss_dssp HHHHHHHHHHTCEEEEECSCH--HHHHHHHHHHGGG-SCGGGCCEEEEE-SSC----CCTTTCSEEEECTTCCCC
T ss_pred HHHHHHHHhcCCEEEEEcCCH--HHHHHHHHHHHHh-CCHHHHhccccc-hhh----cchhheeeecCCCCcccC
Confidence 455677888999999998653 3555567777777 999999998642 221 122356777777776543
No 68
>1xxa_A ARGR, arginine repressor; complex (DNA binding protein/peptide); HET: ARG; 2.20A {Escherichia coli K12} SCOP: d.74.2.1 PDB: 1xxb_A* 1xxc_A
Probab=35.94 E-value=41 Score=25.73 Aligned_cols=37 Identities=24% Similarity=0.465 Sum_probs=31.6
Q ss_pred cCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 009035 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (546)
Q Consensus 230 aGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~ 269 (546)
.+|-+|+|..|-. +..++.++.+.+.+++++..+.|+
T Consensus 14 ~~n~vVikT~PG~---A~~va~~iD~~~~~~~I~GTIAGD 50 (78)
T 1xxa_A 14 NDAVVVIHTSPGA---AQLIARLLDSLGKAEGILGTIAGD 50 (78)
T ss_dssp CSSCEEEEESTTT---HHHHHHHHTTTTTTTTEEEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhcCCCCCeEEEEecC
Confidence 6899999988665 788999998887889999999884
No 69
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=35.92 E-value=29 Score=30.66 Aligned_cols=52 Identities=19% Similarity=0.277 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcC--CCccEEEecCCchHHH
Q 009035 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTGK 296 (546)
Q Consensus 244 ~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~--~~v~~V~ftGs~~~g~ 296 (546)
.....|++++++.|+..-...+++.+ +.+.+.|.+. .+.|.|+.||++..+.
T Consensus 27 sn~~~l~~~l~~~G~~v~~~~iv~Dd-~~i~~al~~a~~~~~DlVittGG~s~g~ 80 (164)
T 3pzy_A 27 RCGPIITEWLAQQGFSSAQPEVVADG-SPVGEALRKAIDDDVDVILTSGGTGIAP 80 (164)
T ss_dssp CHHHHHHHHHHHTTCEECCCEEECSS-HHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred HHHHHHHHHHHHCCCEEEEEEEeCCH-HHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 35678899999999877777888887 7777766542 3689999999987543
No 70
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=34.94 E-value=55 Score=28.55 Aligned_cols=114 Identities=17% Similarity=0.132 Sum_probs=73.8
Q ss_pred eeEEEEcCccc-hHHHHHHHHHHHhhcCCeEEEecCCCChHHHHHHHHHHHH-cCCCCCcEEEEeC-CchhHHHHHHcCC
Q 009035 205 GVAGQIIPWNF-PLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVSKLLHE-AGLPPGVLNIVSG-YGPTAGAALASHM 281 (546)
Q Consensus 205 GVv~~i~p~n~-P~~~~~~~l~~ALaaGN~VVlkps~~~p~t~~~l~~~l~~-aGlP~gvv~vv~g-~~~~~~~~L~~~~ 281 (546)
|.|+++..-+. +-...+.+-...+..|-.++--. -|+ +.|++ .|+|-..++=++. ..+.+++.+.+ .
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT~-----gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~-g 81 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYATG-----TTG----NLISRATGMNVNAMLSGPMGGDQQVGALISE-G 81 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEET-----THH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHHT-T
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEcc-----HHH----HHHHHHhCceeEEEEecCCCCCchHHHHHHC-C
Confidence 66666665544 44555556666777899887632 244 44555 7999666553332 24556666655 5
Q ss_pred CccEEEecCC-------chHHHHHHHHHhhcCCcceEeecCCcCcEEEecCCCHHHHHHHHHHHHhccCC
Q 009035 282 EVDKLAFTGS-------TTTGKIVLQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAAELAHYALFFNQG 344 (546)
Q Consensus 282 ~v~~V~ftGs-------~~~g~~i~~~aa~~~~~pv~lelgG~~p~iV~~dADl~~a~~~i~~~~f~~~G 344 (546)
.|+.|+||=+ ..-+..|.+.+.. ..+|+..-+ ..++.++.+.+++..
T Consensus 82 eIdlVInt~~pl~~~~h~~D~~~IrR~A~~-~~IP~~T~l---------------atA~a~v~ai~~~~~ 135 (152)
T 1b93_A 82 KIDVLIFFWDPLNAVPHDPDVKALLRLATV-WNIPVATNV---------------ATADFIIQSPHFNDA 135 (152)
T ss_dssp CCCEEEEECCTTSCCTTHHHHHHHHHHHHH-TTCCEESSH---------------HHHHHHHTSGGGGSC
T ss_pred CccEEEEcCCcccCCcccccHHHHHHHHHH-cCCCEEeCH---------------HHHHHHHHHHhcccc
Confidence 8999999876 3467888888887 567766532 355667777777764
No 71
>2p5m_A Arginine repressor; alpha-beta, L-arginine binding domain, DNA binding protein; HET: ARG; 1.95A {Bacillus subtilis} SCOP: d.74.2.1
Probab=34.86 E-value=48 Score=25.63 Aligned_cols=36 Identities=22% Similarity=0.325 Sum_probs=30.3
Q ss_pred cCCeEEEecCCCChHHHHHHHHHHHHcCCCCCcEEEEeCC
Q 009035 230 CGNTIVLKTAEQTPLSALYVSKLLHEAGLPPGVLNIVSGY 269 (546)
Q Consensus 230 aGN~VVlkps~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~ 269 (546)
++|-+|+|..|-. +..++.++.+.++|+ ++..|.|+
T Consensus 24 ~~n~vVikT~PG~---A~~vA~~iD~~~~~e-IlGTIAGD 59 (83)
T 2p5m_A 24 ASHMIVLKTMPGN---AQAIGALMDNLDWDE-MMGTICGD 59 (83)
T ss_dssp ETTEEEEEESTTC---HHHHHHHHHTTTCTT-CCEEEECS
T ss_pred cCCEEEEEeCCCc---HHHHHHHHHhCCCCC-eEEEEecC
Confidence 7999999998765 788999999987776 88888874
No 72
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=34.55 E-value=24 Score=31.21 Aligned_cols=54 Identities=26% Similarity=0.233 Sum_probs=38.4
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcC---CCccEEEecCCchHH
Q 009035 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH---MEVDKLAFTGSTTTG 295 (546)
Q Consensus 242 ~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~---~~v~~V~ftGs~~~g 295 (546)
.-.....|++.+.+.|+..-...+++.+-..+.+.|... .+.|.|+.||++..+
T Consensus 29 ~Dsn~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~~~~~~~~DlVittGG~g~g 85 (169)
T 1y5e_A 29 TDKSGQLLHELLKEAGHKVTSYEIVKDDKESIQQAVLAGYHKEDVDVVLTNGGTGIT 85 (169)
T ss_dssp TCHHHHHHHHHHHHHTCEEEEEEEECSSHHHHHHHHHHHHTCTTCSEEEEECCCSSS
T ss_pred ccChHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEEcCCCCCC
Confidence 335667889999999987666677776555565555431 268999999998654
No 73
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=34.26 E-value=44 Score=28.28 Aligned_cols=49 Identities=20% Similarity=0.146 Sum_probs=34.9
Q ss_pred CcEEEEeCCchhHHHHHHcCCCccEEEecCCchHHHHHHHHHhhcCCcce
Q 009035 261 GVLNIVSGYGPTAGAALASHMEVDKLAFTGSTTTGKIVLQLAAKSNLKPV 310 (546)
Q Consensus 261 gvv~vv~g~~~~~~~~L~~~~~v~~V~ftGs~~~g~~i~~~aa~~~~~pv 310 (546)
|.+.+++|+.++.-..+.+.+++.+|++||+...-..+.+.+.+ ...|+
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~-~~ipv 101 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEE-RGVPV 101 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHH-HTCCE
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHH-CCCeE
Confidence 57888888766654444433579999999999888888877765 33443
No 74
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=30.72 E-value=47 Score=29.40 Aligned_cols=54 Identities=26% Similarity=0.115 Sum_probs=39.0
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHH---cCCCccEEEecCCchHH
Q 009035 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALA---SHMEVDKLAFTGSTTTG 295 (546)
Q Consensus 242 ~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~---~~~~v~~V~ftGs~~~g 295 (546)
.-....+|++.|.+.|+.---..+++.+-+.+..++. ...+.|.|+.||+...+
T Consensus 38 ~D~ng~~L~~~L~~~G~~v~~~~iV~Dd~~~i~~al~~~~a~~~~DlVittGG~g~~ 94 (178)
T 3iwt_A 38 VDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYS 94 (178)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSS
T ss_pred CcchHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEecCCcccC
Confidence 3457788999999999886666777765455555553 34568999999998743
No 75
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=30.37 E-value=33 Score=30.99 Aligned_cols=55 Identities=25% Similarity=0.178 Sum_probs=40.7
Q ss_pred ChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHcC--CCccEEEecCCchHHH
Q 009035 242 TPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALASH--MEVDKLAFTGSTTTGK 296 (546)
Q Consensus 242 ~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~--~~v~~V~ftGs~~~g~ 296 (546)
.-.....|++++++.|+..-...+++.+-+.+.+.|... .+.|.|+.||++..+.
T Consensus 47 ~Dsn~~~L~~~L~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~DlVIttGGts~g~ 103 (185)
T 3rfq_A 47 EDHSGPLVTELLTEAGFVVDGVVAVEADEVDIRNALNTAVIGGVDLVVSVGGTGVTP 103 (185)
T ss_dssp CCSHHHHHHHHHHHTTEEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESCCSSST
T ss_pred cCcHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhCCCCEEEECCCCCCCC
Confidence 334677899999999987666777877656666666542 4689999999987544
No 76
>3hhl_A RPA0582; alpha-beta-barrel, structural genomics, PSI-2, protein struc initiative, reductive methylation; HET: MLY MLZ PGE 2PE PE8 1PE PG4; 2.65A {Rhodopseudomonas palustris} PDB: 3hhl_B* 3hhl_C* 3dca_A
Probab=29.79 E-value=62 Score=27.82 Aligned_cols=66 Identities=14% Similarity=0.128 Sum_probs=41.8
Q ss_pred CCCHHHHHHHHHHHHHHHh-CCCeEecCCcccCCCCceecceeeccCCCCCcccccccccceEEEEEeCCHHHHHHHHHc
Q 009035 389 QIDSEQFEKILKYIRSGVD-GGAKLETGGERLGAKGYYIKPTVFTGVKDDMLIAKDEIFGPVQSILKYKDLDEVIQRSNA 467 (546)
Q Consensus 389 l~~~~~~~~~~~~i~~a~~-~Ga~v~~gg~~~~~~g~~~~Ptv~~~v~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~N~ 467 (546)
+.+.+.+++..+.+...++ -|++++..|.. +.++.+... |. ..-+.|+.|.|.+.+++..|+
T Consensus 45 vtd~e~y~~Y~~~~~~~l~~~GG~~l~rG~~---------~~~lEG~~~-------e~-~~~~viieFPS~~aa~a~y~S 107 (143)
T 3hhl_A 45 TTGAEAYAAYGRDSGPVSERLGGXVVWQGQF---------ELMLIGPQD-------EH-WDHVFIAEYPSVAAFVEMIRD 107 (143)
T ss_dssp CBHHHHHHHHHHHHHHHHHHTTCEEEEEEEE---------EEEEESCTT-------CC-CSEEEEEEESCHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEeecCC---------ceeEECCCC-------CC-CCeEEEEECCCHHHHHHHHcC
Confidence 4566666666666655543 47887776553 234443221 11 145689999999999999887
Q ss_pred CCCC
Q 009035 468 SQYG 471 (546)
Q Consensus 468 ~~~g 471 (546)
..|.
T Consensus 108 peYq 111 (143)
T 3hhl_A 108 PVYR 111 (143)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 77
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=23.44 E-value=54 Score=29.27 Aligned_cols=57 Identities=23% Similarity=0.081 Sum_probs=40.1
Q ss_pred CCChHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHc---CCCccEEEecCCchHHH
Q 009035 240 EQTPLSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS---HMEVDKLAFTGSTTTGK 296 (546)
Q Consensus 240 ~~~p~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~---~~~v~~V~ftGs~~~g~ 296 (546)
...-.....|++++++.|...-...+++.+-+.+.+.|.+ ..+.|.|+.||++..+.
T Consensus 36 ~i~Dsn~~~L~~~l~~~G~~v~~~~iv~Dd~~~I~~al~~a~~~~~~DlVittGG~s~g~ 95 (178)
T 2pjk_A 36 PIVDESGDIIKQLLIENGHKIIGYSLVPDDKIKILKAFTDALSIDEVDVIISTGGTGYSP 95 (178)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHTCTTCCEEEEESCCSSST
T ss_pred eEeehHHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHHhcCCCCEEEECCCCCCCC
Confidence 3344567788999999998766667787765566665543 22389999999987543
No 78
>1wu2_A MOEA protein, molybdopterin biosynthesis MOEA protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.30A {Pyrococcus horikoshii} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1xi8_A
Probab=21.57 E-value=27 Score=35.64 Aligned_cols=53 Identities=15% Similarity=0.201 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHc-CCCccEEEecCCchHHH
Q 009035 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS-HMEVDKLAFTGSTTTGK 296 (546)
Q Consensus 244 ~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~-~~~v~~V~ftGs~~~g~ 296 (546)
.....|..++++.|...-.+.+++.+-..+.+.|.+ ....|.|+.||++..|.
T Consensus 211 sn~~~L~~~l~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~DlvittGG~s~g~ 264 (396)
T 1wu2_A 211 TNSIMLQGLVEKFFGEPILYGVLPDDESIIKETLEKAKNECDIVLITGGSAFGD 264 (396)
T ss_dssp CHHHHHHHHHHHTTCEEEEEEEECSCHHHHTTHHHHHHHCSEEEECC-------
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHHHHHHHHHHHhhCCCEEEEeCCCCCCh
Confidence 355678899999998665666777654444444432 12479999999998765
No 79
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=21.08 E-value=53 Score=29.09 Aligned_cols=52 Identities=23% Similarity=0.162 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHHc---CCCccEEEecCCchHH
Q 009035 244 LSALYVSKLLHEAGLPPGVLNIVSGYGPTAGAALAS---HMEVDKLAFTGSTTTG 295 (546)
Q Consensus 244 ~t~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~---~~~v~~V~ftGs~~~g 295 (546)
..+..|++.+.+.|+..-...+++.+-+.+.+.|.. ..+.|.|+.||++..+
T Consensus 28 ~n~~~l~~~L~~~G~~v~~~~iv~Dd~~~i~~~l~~a~~~~~~DlVittGG~g~~ 82 (172)
T 1mkz_A 28 TSGHYLRDSAQEAGHHVVDKAIVKENRYAIRAQVSAWIASDDVQVVLITGGTGLT 82 (172)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHHHHHHHHHHHHHSSSCCEEEEESCCSSS
T ss_pred ccHHHHHHHHHHCCCeEeEEEEeCCCHHHHHHHHHHHHhcCCCCEEEeCCCCCCC
Confidence 456778899999998655566777655555555543 1248999999998643
Done!