Your job contains 1 sequence.
>009036
MEIQAVGTSSPKRQKWKISFYRSSSSISTKAHQLQKPQTAEPPGEFLCPVSGSLMADPVV
VSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVIPNLALKSTILNWCHKQSLNPPKPL
EFSSAEKLVRASMESSQSKGKAMAVSEKELIRGVKEKPSVSFNHAVSELTRRPAYFYASS
SDESMGESSKVSTPPLQLTTRPSCYSSSSSSSSELEPQTLNHPNSNEQEDYFVQKLKSPQ
VHEVEEALISLRKLTRSREETRVSLCTPRLLLALRSLIISRYTNVQVNAVAALVNLSLEK
INKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVLGALPPLLHLL
KSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLILGNLASC
SDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMAEV
LMRMERVGSEHVKEKAKRMLELMKGRAEEEEEGVDWDELLDSGLVSRSRFRLGYGRGEST
GNSSEF
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 009036
(546 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 1269 2.5e-129 1
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 1017 1.3e-102 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 644 6.9e-96 2
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 888 5.9e-89 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 247 1.3e-29 2
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 248 1.7e-29 2
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 257 2.0e-29 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 242 4.3e-29 2
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 256 1.8e-27 2
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 226 3.0e-27 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 245 7.3e-27 2
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 241 1.2e-26 2
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 229 6.1e-22 2
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 172 3.8e-21 2
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 273 7.8e-21 1
TAIR|locus:2096687 - symbol:AT3G01400 species:3702 "Arabi... 242 1.9e-18 1
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 157 7.4e-17 3
TAIR|locus:2178818 - symbol:AT5G58680 "AT5G58680" species... 221 8.4e-16 1
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 146 9.6e-16 2
TAIR|locus:2130699 - symbol:AT4G16490 "AT4G16490" species... 217 7.1e-15 1
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 138 2.3e-14 2
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 138 8.3e-14 2
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 134 2.3e-13 2
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 130 4.7e-12 2
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 132 2.0e-11 2
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 133 2.5e-10 2
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 131 5.1e-10 2
TAIR|locus:2116792 - symbol:AT4G31890 "AT4G31890" species... 171 1.2e-09 1
TAIR|locus:2099634 - symbol:AT3G03440 "AT3G03440" species... 162 7.2e-09 1
TAIR|locus:2040214 - symbol:AT2G25130 species:3702 "Arabi... 163 7.4e-09 1
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 115 1.2e-08 2
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 113 1.2e-08 2
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 105 2.2e-08 2
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 102 4.6e-08 2
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 119 1.9e-07 2
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 118 2.5e-07 2
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 111 4.0e-07 2
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 115 8.1e-07 2
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 112 1.0e-06 2
TAIR|locus:2135788 - symbol:AT4G12710 species:3702 "Arabi... 139 2.5e-06 1
TAIR|locus:2038598 - symbol:AT2G27430 "AT2G27430" species... 138 3.8e-06 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 110 3.9e-06 2
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 119 4.2e-06 2
TAIR|locus:2198235 - symbol:AT1G01830 "AT1G01830" species... 139 4.5e-06 1
SGD|S000000739 - symbol:VAC8 "Phosphorylated and palmitoy... 137 7.6e-06 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 99 1.2e-05 2
ASPGD|ASPL0000008980 - symbol:AN12408 species:162425 "Eme... 133 2.1e-05 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 127 2.6e-05 2
CGD|CAL0001835 - symbol:VAC8 species:5476 "Candida albica... 130 4.5e-05 1
UNIPROTKB|Q59MN0 - symbol:VAC8 "Vacuolar protein 8" speci... 130 4.5e-05 1
TAIR|locus:2157358 - symbol:AT5G50900 species:3702 "Arabi... 129 5.4e-05 1
TAIR|locus:1005716696 - symbol:AT1G08315 species:3702 "Ar... 106 0.00013 2
TAIR|locus:2150295 - symbol:ARIA "ARM repeat protein inte... 98 0.00019 2
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 96 0.00020 2
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 120 0.00036 1
TAIR|locus:2145653 - symbol:AT5G14510 species:3702 "Arabi... 116 0.00060 1
TAIR|locus:2103351 - symbol:ARABIDILLO-2 "AT3G60350" spec... 122 0.00061 1
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 1269 (451.8 bits), Expect = 2.5e-129, P = 2.5e-129
Identities = 273/516 (52%), Positives = 344/516 (66%)
Query: 37 PQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVI 96
P E P EFLCP+SGSLMADP++VSSGH++ERAC CKTLGFTPT PDFSTVI
Sbjct: 53 PTKTEIPAEFLCPISGSLMADPIIVSSGHSYERACVIACKTLGFTPT----PPPDFSTVI 108
Query: 97 PNLALKSTILNWCHKQSLNPPKPLEFSSAEKLVRASMESSQSKGKAMAVSEKELIRGVKE 156
PNLALKS I +WC ++ PPKPL ++AEKL+ A ME + K ++VSEKELI+ +++
Sbjct: 109 PNLALKSAIHSWCERRCFPPPKPLNSAAAEKLILALMEKKPQRRK-VSVSEKELIQAIRD 167
Query: 157 KPSVSFNHAVSELTRRPAYFYAXXXXXXXXXXXXXXTPPLQLTTRPSCYXXXXXXXXELE 216
KPSV NHA +EL RRP YF + LQLTT+PSC+ E+E
Sbjct: 168 KPSVRLNHAATELDRRPNYFNSSSDESIASSSRT-----LQLTTKPSCFSSPSSG--EIE 220
Query: 217 PQTLNHPNSNEQEDYFVQKLKSPQVHEVEEALISLRKLTRSREETRVSLCTPXXXXXXXX 276
+L PN +E+ + KLKS ++ E+EEALIS+R++TR E +R+SLCT
Sbjct: 221 --SLE-PNLTPEEEALLTKLKSNRISEIEEALISIRRITRIDESSRISLCTTRVISALKS 277
Query: 277 XXXXXYTXXXXXXXXXXXXXXXEKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFS 336
Y EK NK+ IVRSG+VPP++DVL GS EAQEH+ G IFS
Sbjct: 278 LIVSRYATVQVNVTAVLVNLSLEKSNKVKIVRSGIVPPLIDVLKCGSVEAQEHSAGVIFS 337
Query: 337 LALDDQNKTAIGVXXXXXXXXXXXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNA 396
LAL+D+NKTAIGV + +E T+HDSALALYHLSLV+SNR KLVKLG+V
Sbjct: 338 LALEDENKTAIGVLGGLEPLLHLIRVGTELTRHDSALALYHLSLVQSNRGKLVKLGAVQM 397
Query: 397 LLGMVNSGHMTGRVLLILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVS 456
LLGMV+ G M GRVLLIL N+ASC R A+LDSGGVEC+VG+LR+ E++EST+ESCV+
Sbjct: 398 LLGMVSLGQMIGRVLLILCNMASCPVSRPALLDSGGVECMVGVLRRDREVNESTRESCVA 457
Query: 457 VLYALSH-GGLRFKGLAAAAGMAEVLMRMERVGSEHVKEKAKRMLELMKGRAXXXXX--- 512
VLY LSH GGLRFKGLA AA E L+++ER G E K+KA+R+LE+++ +
Sbjct: 458 VLYGLSHDGGLRFKGLAMAANAVEELVKVERSGRERAKQKARRVLEVLRAKIEDDDLVEN 517
Query: 513 -GVDWDELLDSGLVSRSRFRLGYGRGE-STGNSSEF 546
+DW+ELL+SG VSRSR RLG GE S NS+EF
Sbjct: 518 EEIDWEELLNSGDVSRSRCRLG---GEKSCVNSAEF 550
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 1017 (363.1 bits), Expect = 1.3e-102, P = 1.3e-102
Identities = 234/558 (41%), Positives = 320/558 (57%)
Query: 13 RQKWKISFYRXXXXXXTKAHQLQKPQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACA 72
R +W +R + + Q Q+ Q +PP EFLCP+S S+M+DPVVVSSG TFER C
Sbjct: 6 RLRWNPFSHRSSSSTSSSSRQQQQEQ--QPPVEFLCPISKSVMSDPVVVSSGQTFERVCV 63
Query: 73 HVCKTLGFTPTLVDG--TTPDFSTVIPNLALKSTILNWCHKQSLNPPKPLEFSSAEKLVR 130
VC+ L F P L D + PDFS +IPNL +KSTI WC ++ P+P ++S+ E+++R
Sbjct: 64 QVCRDLNFIPKLNDDEESLPDFSNIIPNLNMKSTIDTWCDTVGVSRPQPPDYSTVERILR 123
Query: 131 ASMESSQSKGKAMAVSEKELIRGVKEKPSVSFNHAVSELTRRPAYFYAXXXXXXXXXXXX 190
M + + VSE+EL+R V + + +HA SEL R + +
Sbjct: 124 QQMPPPDVE---IRVSEQELLRAVAHRAPMIIHHADSELMGRRDFNNSTTSSDESVIVAH 180
Query: 191 XXTPPLQLTTRPSCYXXXXXXXXELEPQTLNH----PNSN----EQEDYFVQKLKSPQVH 242
PL LTTRP+C+ E +TL H NS E+++ KLKS ++
Sbjct: 181 SPFTPLPLTTRPACFSPSPSSSSS-EIETLTHHTFFSNSTSTATEEDEVIYNKLKSSEIF 239
Query: 243 EVEEALISLRKLTRSREETRVSLCTPXXXXXXXXXXXXXYTXXXXXXXXXXXXXXXEKIN 302
+ E+ LI +RK+TR+ +E RVSLC+P Y+ +K N
Sbjct: 240 DQEQGLIMMRKMTRTNDEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKN 299
Query: 303 KMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXKS 362
K+ IVR G VP ++DVL +GS EAQEHA G IFSL+L+D NK IGV ++
Sbjct: 300 KLTIVRLGFVPILIDVLKSGSREAQEHAAGTIFSLSLEDDNKMPIGVLGALQPLLHALRA 359
Query: 363 -DSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLILGNLASCS 421
+S+RT+HDSALALYHL+L ++NR+KLV+LG+V AL MV SG R LL++ NLA CS
Sbjct: 360 AESDRTRHDSALALYHLTLNQTNRSKLVRLGAVPALFSMVRSGESASRALLVICNLACCS 419
Query: 422 DGRVAVLDSGGVECLVGMLRKG-----TEL--SESTQESCVSVLYALSHGGLRFKGLAAA 474
+GR A+LD+ V LVG LR+ TE S S +E+CV+ L+ALSH LRFKGLA
Sbjct: 420 EGRSAMLDANAVAILVGKLREEWTEEPTEARSSSSARENCVAALFALSHESLRFKGLAKE 479
Query: 475 AGMAEVLMRMERVGSEHVKEKAKRMLELMKGRA-----XXXXXGVDWDELLDSGLVSRSR 529
A EVL +E G+E +EKAK++L+LM+ R +DWD ++DS RSR
Sbjct: 480 ARAVEVLKEVEERGTERAREKAKKILQLMRERVPEDDEEDGEGSIDWDRVIDSNGSIRSR 539
Query: 530 FRLGYGRGES-TGNSSEF 546
FR+G GR T NSS F
Sbjct: 540 FRVG-GRNRVVTQNSSGF 556
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 644 (231.8 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
Identities = 149/332 (44%), Positives = 201/332 (60%)
Query: 223 PNSNEQEDYFVQKLKSPQVHEVEEALISLRKLTRSREETRVSLCTPXXXXXXXXXXXXXY 282
P S E+E+ F KL+ + + E+ LI LRK+TRS E+ RVSLCT Y
Sbjct: 231 PMSPEEEEIF-NKLRGTDIFDHEQGLILLRKMTRSSEDLRVSLCTDRILSFLRSLLVSRY 289
Query: 283 TXXXXXXXXXXXXXXXEKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQ 342
EK NK+ IVRSG VP ++DVL +G+ EAQEH GA+FSLAL+D+
Sbjct: 290 NLVQTNAAASVVNLSLEKQNKVKIVRSGFVPLLIDVLKSGTTEAQEHVAGALFSLALEDE 349
Query: 343 NKTAIGVXXXXXXXXXXXKS-DSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMV 401
NK IGV +S +SER + D+ALALYHLSL+ SNRT+LV+ G+V LL MV
Sbjct: 350 NKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMV 409
Query: 402 NSGHMTGRVLLILGNLASCSDGRVAVLDSGGVECLVGMLRK-GTELSESTQESCVSVLYA 460
SG T R+LL+L NLA+C DG+ A+LD V LVG LR+ G SE+ +E+CV+VL
Sbjct: 410 RSGDSTSRILLVLCNLAACPDGKGAMLDGNAVAILVGKLREVGGGDSEAARENCVAVLLT 469
Query: 461 LSHGGLRFKGLAAAAGMAEVLMRMERVGSEHVKEKAKRMLELMKGRAXXXXX-GV----- 514
L G LRF+GLA+ AG EVLM +E G+E VKEKA ++L M+G G
Sbjct: 470 LCQGNLRFRGLASEAGAEEVLMEVEENGNERVKEKASKILLAMRGGGGGESEFGENAEAR 529
Query: 515 DWDELLDSGLVSRSRFRLGYGRGESTGNSSEF 546
+W+ +L++ +SR++F+ G G + SS+F
Sbjct: 530 EWNRMLEATGLSRTQFQGGQNGGFAY--SSQF 559
Score = 329 (120.9 bits), Expect = 6.9e-96, Sum P(2) = 6.9e-96
Identities = 72/165 (43%), Positives = 99/165 (60%)
Query: 13 RQKWKISFYRXXXXXXTKAHQLQKPQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACA 72
+Q+W SF++ T L + + E P EFLCP++G LM+DPVVVSSG TFER
Sbjct: 5 KQRW-FSFHQRSSSATTTT--LPQHKHDETPPEFLCPITGFLMSDPVVVSSGQTFERLSV 61
Query: 73 HVCKTLGFTPTLVDGTTPDFSTVIPNLALKSTILNWCHKQSLNPPKPLEFSSAEKLVRAS 132
VC+ LG+ P L+DGT PD STVIPNLA+KSTI +WC +Q ++ P+P + + E +VRA
Sbjct: 62 QVCRNLGYIPDLLDGTRPDLSTVIPNLAMKSTIFSWCDRQKVDHPRPPDAAYVEGVVRAR 121
Query: 133 MESS------QSKGKAMAVSEKELIRGVKEKPSVSFNHAVSELTR 171
M+ QS G E E++ V+E ++ AV E R
Sbjct: 122 MDKDPNPSPGQSPGPGDKDPEPEILPPVEENSPSDYD-AVMEAIR 165
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
Identities = 203/520 (39%), Positives = 287/520 (55%)
Query: 35 QKPQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFST 94
Q E P EFLCP++G LM+DPVVV+SG TFER VC+ L F P L DGT PD ST
Sbjct: 3 QHNSPGETPTEFLCPITGFLMSDPVVVASGQTFERISVQVCRNLSFAPKLHDGTQPDLST 62
Query: 95 VIPNLALKSTILNWCHKQSLNPPKPLEFSSAEKLVRASMESSQSKGKAMAVSEKELIRGV 154
VIPNLA+KSTIL+WC + + P+P +++ E +VR M+S G +++ E++ V
Sbjct: 63 VIPNLAMKSTILSWCDRNKMEHPRPPDYAYVEGVVRTRMDSLPP-GSGHRIAKSEILPPV 121
Query: 155 KEKPSVSFNHAVSELTRRPAYFYAXXXXXXXXXXXXXXTPPLQLTTRPSCYXXXXXXXXE 214
E + + ++ + A P Q TRP +
Sbjct: 122 AENSNSNSDY--------DSVMGAIRSRSRTSLSSTTSLPLHQ--TRPINHSTRIQSSFS 171
Query: 215 LEPQTLNHPNSNEQEDYFVQKLKSPQVHEVEEALISLRKLTRSREETRVSLCTPXXXXXX 274
+ P S E+E+ + KL S + E+ LI LRK TRS E TR+SLCT
Sbjct: 172 TSDYSSFPPMSPEEEEIY-NKLTSVDTIDHEQGLIQLRKTTRSNETTRISLCTDRILSLL 230
Query: 275 XXXXXXXYTXXXXXXXXXXXXXXXEKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAI 334
Y EK NK+ IVRSG VP ++DVL +GS EAQEH GA+
Sbjct: 231 RSLIVSRYNIVQTNAAASIVNLSLEKPNKLKIVRSGFVPLLIDVLKSGSTEAQEHVIGAL 290
Query: 335 FSLALDDQNKTAIGVXXXXXXXXXXXKS-DSERTQHDSALALYHLSLVKSNRTKLVKLGS 393
FSLA++++NK IGV +S +SER + D+ALALYHLSL+ +NR++LVK G+
Sbjct: 291 FSLAVEEENKMVIGVLGAVEPLLHALRSSESERARQDAALALYHLSLIPNNRSRLVKAGA 350
Query: 394 VNALLGMVNSGHMTGRVLLILGNLASCSDGRVAVLDSGGVECLVGMLRK--GTELSESTQ 451
V +L M+ SG R+LL+L NLA+CS+G+ A+LD V LVG LR+ G E + +
Sbjct: 351 VPMMLSMIRSGESASRILLLLCNLAACSEGKGAMLDGNAVSILVGKLRESGGAESDAAAR 410
Query: 452 ESCVSVLYALSHGGLRFKGLAAAAGMAEVLMRM--ERVGSEHVKEKAKRMLELMKGRAXX 509
E+CV L LS G +RF+GLA+ AG E+L + GS +KEKA ++L+ ++G
Sbjct: 411 ENCVGALLTLSVGNMRFRGLASEAGAEEILTEIVESESGSGRLKEKASKILQTLRGGGSE 470
Query: 510 XXXGVD---WDELLDSGLVSRSRFRLGYGRGESTGNSSEF 546
G + W+ +L++ +SRS+F+ G +G SS+F
Sbjct: 471 FGEGAEAREWNRMLEASGLSRSQFQQGGQKG-GFAYSSQF 509
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 247 (92.0 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 64/204 (31%), Positives = 105/204 (51%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
NK IV S +P IV+VL GS E +E+A +FSL++ D+NK IG
Sbjct: 398 NKASIVDSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLC 457
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLG-MVN-SGHMTGRVLLILGNLAS 419
S R + D+A A+++L + + N+ + VK G V L+ +V+ +G M L +L LA
Sbjct: 458 DGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEALSLLSILAG 517
Query: 420 CSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMAE 479
+G++ + S + LV +++ G S +E+ ++L+ L A AAG+ +
Sbjct: 518 NPEGKIVIARSEPIPPLVEVIKTG---SPRNRENAAAILWLLCSADTEQTLAAKAAGVED 574
Query: 480 VLMRMERVGSEHVKEKAKRMLELM 503
L + G++ K KA +LELM
Sbjct: 575 ALKELSETGTDRAKRKASSILELM 598
Score = 154 (59.3 bits), Expect = 1.3e-29, Sum P(2) = 1.3e-29
Identities = 35/91 (38%), Positives = 47/91 (51%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTP-DFSTVIPNLAL 101
P EF CP+S LM DPV+VSSG T+ER+C G T P +++ PN L
Sbjct: 229 PDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHK-TCPKTQQPLSHTSLTPNFVL 287
Query: 102 KSTILNWCHKQSLNPPKPLEFSSAEKLVRAS 132
KS I WC + PK + S +K ++S
Sbjct: 288 KSLISQWCEANGIELPKNKQNSRDKKAAKSS 318
Score = 149 (57.5 bits), Expect = 1.7e-18, Sum P(2) = 1.7e-18
Identities = 48/204 (23%), Positives = 95/204 (46%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
N++ I +G +P +V++L + QEHA A+ +L++ + NK +I K
Sbjct: 357 NRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHENNKASIVDSHAIPKIVEVLK 416
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGR--VLLILGNLAS 419
+ S T+ ++A L+ LS+V N+ + G++ L+ ++ G G+ + NL
Sbjct: 417 TGSMETRENAAATLFSLSVVDENKVTIGAAGAIPPLINLLCDGSPRGKKDAATAIFNLCI 476
Query: 420 CSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMAE 479
+V + +G V L+ L + + + +S+L L+ G K + A +
Sbjct: 477 YQGNKVRAVKAGIVIHLMNFL---VDPTGGMIDEALSLLSILA-GNPEGKIVIARSEPIP 532
Query: 480 VLMRMERVGSEHVKEKAKRMLELM 503
L+ + + GS +E A +L L+
Sbjct: 533 PLVEVIKTGSPRNRENAAAILWLL 556
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 248 (92.4 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 76/278 (27%), Positives = 122/278 (43%)
Query: 230 DYFVQKLKSPQVHEVEEALISLRKLTRSREETRVSLCTPXXXXXXXXXXXXXYTXXXXXX 289
D + KL SP E A LR L + R+ +
Sbjct: 370 DALLSKLCSPDTEEQRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHA 429
Query: 290 XXXXXXXXXEKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGV 349
+ NK I+ SG VP IV VL GS EA+E+A +FSL++ D+ K IG
Sbjct: 430 VTALLNLSIHEDNKASIISSGAVPSIVHVLKNGSMEARENAAATLFSLSVIDEYKVTIGG 489
Query: 350 XXXXXXXXXXXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNS--GHMT 407
S+R + D+A AL++L + + N+ + ++ G V ++G+V + G +
Sbjct: 490 MGAIPALVVLLGEGSQRGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALM 549
Query: 408 GRVLLILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLR 467
+ IL L+S +G+ A+ + V LV M+ GT + +E+ +V+ L G
Sbjct: 550 DEAMAILSILSSHPEGKAAIGAAEPVPVLVEMIGSGTPRN---RENAAAVMLHLCSGEHH 606
Query: 468 FKGLAAA--AGMAEVLMRMERVGSEHVKEKAKRMLELM 503
LA A G+ L + G++ K KA ++LE M
Sbjct: 607 LVHLARAQECGIMVPLRELALNGTDRGKRKAVQLLERM 644
Score = 154 (59.3 bits), Expect = 1.7e-29, Sum P(2) = 1.7e-29
Identities = 31/76 (40%), Positives = 38/76 (50%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVIPNLALK 102
P EF CP+S LM DPV+VS+G T+ERAC G S + PN L+
Sbjct: 274 PDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLR 333
Query: 103 STILNWCHKQSLNPPK 118
S I WC + PPK
Sbjct: 334 SLISQWCETNGMEPPK 349
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 257 (95.5 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 67/275 (24%), Positives = 128/275 (46%)
Query: 233 VQKLKSPQVHEVEEALISLRKLTRSREETRVSLCTPXXXXXXXXXXXXXYTXXXXXXXXX 292
V++LKS + +A LR L + + R+ + +
Sbjct: 550 VEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYSTDSATQENAVTA 609
Query: 293 XXXXXXEKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXX 352
NK I +G + P++ VL GS+EA+E++ +FSL++ ++NK IG
Sbjct: 610 LLNLSINDNNKKAIADAGAIEPLIHVLENGSSEAKENSAATLFSLSVIEENKIKIGQSGA 669
Query: 353 XXXXXXXXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVN-SGHMTGRVL 411
+ + R + D+A AL++LS+ + N+ +V+ G+V L+ +++ + M + +
Sbjct: 670 IGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMIVQSGAVRYLIDLMDPAAGMVDKAV 729
Query: 412 LILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGL 471
+L NLA+ +GR A+ GG+ LV ++ G S +E+ + L LS RF +
Sbjct: 730 AVLANLATIPEGRNAIGQEGGIPLLVEVVELG---SARGKENAAAALLQLSTNSGRFCNM 786
Query: 472 AAAAGMAEVLMRMERVGSEHVKEKAKRMLELMKGR 506
G L+ + + G+ +EKA+ +L + +
Sbjct: 787 VLQEGAVPPLVALSQSGTPRAREKAQALLSYFRNQ 821
Score = 146 (56.5 bits), Expect = 2.0e-29, Sum P(2) = 2.0e-29
Identities = 38/109 (34%), Positives = 55/109 (50%)
Query: 45 EFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVIPNLALKST 104
+F CP+S +M DPV+VSSG T+E+A LG T +T+IPN +K+
Sbjct: 236 DFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPNYTVKAL 295
Query: 105 ILNWCHKQSLNPPKPLEFSSAEKL--VRASMESSQSKG---KAMAVSEK 148
I NWC + P P + +S +L + + +S S G A VS K
Sbjct: 296 IANWCETNDVKLPDPNKSTSLNELSPLLSCTDSIPSTGADVSARKVSNK 344
Score = 128 (50.1 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 44/167 (26%), Positives = 74/167 (44%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
NK+ I +SG + P+VD+L G+ ++ A A+F+L++ +NK I
Sbjct: 660 NKIKIGQSGAIGPLVDLLGNGTPRGKKDAATALFNLSIHQENKAMI--VQSGAVRYLIDL 717
Query: 362 SDSERTQHDSALA-LYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLILGNLA-S 419
D D A+A L +L+ + R + + G + L+ +V G G+ L S
Sbjct: 718 MDPAAGMVDKAVAVLANLATIPEGRNAIGQEGGIPLLVEVVELGSARGKENAAAALLQLS 777
Query: 420 CSDGRVA--VLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHG 464
+ GR VL G V LV + + GT + ++ +S HG
Sbjct: 778 TNSGRFCNMVLQEGAVPPLVALSQSGTPRAREKAQALLSYFRNQRHG 824
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 242 (90.2 bits), Expect = 4.3e-29, Sum P(2) = 4.3e-29
Identities = 71/294 (24%), Positives = 135/294 (45%)
Query: 217 PQTLNHPNSNEQEDYFVQKL----KSPQVHEVEEALISLRKLTRSREETRVSLCTPXXXX 272
P T+ S+ + V+KL KS + EA +R L R+ + R+ +
Sbjct: 407 PATVRETGSSSSIETEVKKLIDDLKSSSLDTQREATARIRILARNSTDNRIVIARCEAIP 466
Query: 273 XXXXXXXXXYTXXXXXXXXXXXXXXXEKINKMLIVRSGLVPPIVDVLMAGSAE-AQEHAC 331
NK LI SG + P++ VL G E A+ ++
Sbjct: 467 SLVSLLYSTDERIQADAVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSA 526
Query: 332 GAIFSLALDDQNKTAIGVXXXXXXXXXXXKSDSERTQHDSALALYHLSLVKSNRTKLVKL 391
+FSL++ ++ KT IG S S + D+A AL++LS+ N+TK+++
Sbjct: 527 ATLFSLSVIEEYKTEIGEAGAIEPLVDLLGSGSLSGKKDAATALFNLSIHHENKTKVIEA 586
Query: 392 GSVNALLGMVNSGH-MTGRVLLILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSEST 450
G+V L+ +++ M + +++L NLA+ +G++A+ + GG+ LV ++ G+ +
Sbjct: 587 GAVRYLVELMDPAFGMVEKAVVVLANLATVREGKIAIGEEGGIPVLVEVVELGS--ARGK 644
Query: 451 QESCVSVLYALSHGGLRFKGLAAAAGMAEVLMRMERVGSEHVKEKAKRMLELMK 504
+ + ++L +H +F G+ L+ + + G+ KEKA+ +L+ K
Sbjct: 645 ENATAALLQLCTHSP-KFCNNVIREGVIPPLVALTKSGTARGKEKAQNLLKYFK 697
Score = 157 (60.3 bits), Expect = 4.3e-29, Sum P(2) = 4.3e-29
Identities = 47/144 (32%), Positives = 70/144 (48%)
Query: 30 KAHQLQKPQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTT 89
K QL+ P P +F C +S LM DPV+V+SG TFER +G
Sbjct: 230 KQAQLRCP--VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQA 287
Query: 90 PDFSTVIPNLALKSTILNWCHKQSLNPPKPLEF-SSAEK---LVRASMESSQSKGKAMAV 145
+T+ PN +++ + +WC ++ PP PLE S+E LV + SS G + ++
Sbjct: 288 LSHTTLTPNFIVRAFLASWCETNNVYPPDPLELIHSSEPFPLLVESVRASSSENGHSESL 347
Query: 146 SEKELIRGVKEKPSVSFNHAVSEL 169
+EL R V + S S VSE+
Sbjct: 348 DAEEL-RQVFSR-SASAPGIVSEV 369
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 256 (95.2 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 62/205 (30%), Positives = 109/205 (53%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
NK IV +G + IV+VL GS EA+E+A +FSL++ D+NK AIG +
Sbjct: 420 NKGAIVDAGAITDIVEVLKNGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLE 479
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNS--GHMTGRVLLILGNLAS 419
+ R + D+A A+++L + + N+++ VK G V+ L ++ G M L IL L++
Sbjct: 480 EGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAILAILST 539
Query: 420 CSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMAE 479
+G+ A+ ++ + LV ++R G S +E+ ++L+ L G + +A G
Sbjct: 540 NQEGKTAIAEAESIPVLVEIIRTG---SPRNRENAAAILWYLCIGNIERLNVAREVGADV 596
Query: 480 VLMRMERVGSEHVKEKAKRMLELMK 504
L + G++ K KA +LEL++
Sbjct: 597 ALKELTENGTDRAKRKAASLLELIQ 621
Score = 158 (60.7 bits), Expect = 2.7e-16, Sum P(2) = 2.7e-16
Identities = 47/201 (23%), Positives = 92/201 (45%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
N++ I +G +P +V++L + QEH+ A+ +L++++ NK AI K
Sbjct: 379 NRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEGNKGAIVDAGAITDIVEVLK 438
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGR--VLLILGNLAS 419
+ S + ++A L+ LS++ N+ + G++ AL+ ++ G G+ + NL
Sbjct: 439 NGSMEARENAAATLFSLSVIDENKVAIGAAGAIQALISLLEEGTRRGKKDAATAIFNLCI 498
Query: 420 CSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMAE 479
+ + G V+ L +L+ + + +++L LS K A A
Sbjct: 499 YQGNKSRAVKGGIVDPLTRLLK---DAGGGMVDEALAILAILSTNQ-EGKTAIAEAESIP 554
Query: 480 VLMRMERVGSEHVKEKAKRML 500
VL+ + R GS +E A +L
Sbjct: 555 VLVEIIRTGSPRNRENAAAIL 575
Score = 124 (48.7 bits), Expect = 1.8e-27, Sum P(2) = 1.8e-27
Identities = 35/115 (30%), Positives = 51/115 (44%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVIPNLALK 102
P F CP+S LM DPV+VS+G T+ER+ G T + + PN LK
Sbjct: 249 PEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLK 308
Query: 103 STILNWCHKQSLNPPKPLEFSSAEKLVRASMESSQSKGKAMAVSEKELIRGVKEK 157
S I WC + P+ + S + S S + +++ EK L G E+
Sbjct: 309 SLIALWCESNGIELPQN-QGSCRTTKIGGSSSSDCDRTFVLSLLEK-LANGTTEQ 361
Score = 62 (26.9 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 23/79 (29%), Positives = 35/79 (44%)
Query: 422 DGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMAEVL 481
D RV + ++G + LV +L + TQE V+ L LS KG AG +
Sbjct: 378 DNRVCIAEAGAIPLLVELL---SSPDPRTQEHSVTALLNLSINEGN-KGAIVDAGAITDI 433
Query: 482 MRMERVGSEHVKEKAKRML 500
+ + + GS +E A L
Sbjct: 434 VEVLKNGSMEARENAAATL 452
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 226 (84.6 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 64/203 (31%), Positives = 102/203 (50%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
NK IV +G +P IV VL GS EA+E+A +FSL++ D+NK IG
Sbjct: 427 NKGAIVSAGAIPGIVQVLKKGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLN 486
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVN---SGHMTGRVLLILGNLA 418
++R + D+A AL++L + + N+ K ++ G + L ++ SG M L IL L+
Sbjct: 487 EGTQRGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSG-MVDEALAILAILS 545
Query: 419 SCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMA 478
S +G+ + S V LV +R G S +E+ +VL L G + A G+
Sbjct: 546 SHPEGKAIIGSSDAVPSLVEFIRTG---SPRNRENAAAVLVHLCSGDPQHLVEAQKLGLM 602
Query: 479 EVLMRMERVGSEHVKEKAKRMLE 501
L+ + G++ K KA ++LE
Sbjct: 603 GPLIDLAGNGTDRGKRKAAQLLE 625
Score = 156 (60.0 bits), Expect = 3.0e-27, Sum P(2) = 3.0e-27
Identities = 32/79 (40%), Positives = 42/79 (53%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFT--PTLVDGTTPDFSTVIPNLA 100
P +F CP+S +M DPV+VSSG T+ER C G + P T +T+ PN
Sbjct: 257 PDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTS--TTLTPNYV 314
Query: 101 LKSTILNWCHKQSLNPPKP 119
L+S I WC + PPKP
Sbjct: 315 LRSLIAQWCEANDIEPPKP 333
Score = 153 (58.9 bits), Expect = 4.9e-19, Sum P(2) = 4.9e-19
Identities = 47/201 (23%), Positives = 89/201 (44%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
N++ I +G +P +V +L + QEH+ A+ +L++ + NK AI K
Sbjct: 386 NRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKGAIVSAGAIPGIVQVLK 445
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGR--VLLILGNLAS 419
S + ++A L+ LS++ N+ + LG++ L+ ++N G G+ L NL
Sbjct: 446 KGSMEARENAAATLFSLSVIDENKVTIGALGAIPPLVVLLNEGTQRGKKDAATALFNLCI 505
Query: 420 CSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMAE 479
+ + +G + L +L TE + +++L LS K + ++
Sbjct: 506 YQGNKGKAIRAGVIPTLTRLL---TEPGSGMVDEALAILAILSSHP-EGKAIIGSSDAVP 561
Query: 480 VLMRMERVGSEHVKEKAKRML 500
L+ R GS +E A +L
Sbjct: 562 SLVEFIRTGSPRNRENAAAVL 582
Score = 73 (30.8 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 26/80 (32%), Positives = 40/80 (50%)
Query: 421 SDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMAEV 480
+D RVA+ ++G + LVG+L T S QE V+ L LS KG +AG
Sbjct: 384 ADNRVAIAEAGAIPLLVGLL--STPDSR-IQEHSVTALLNLSICENN-KGAIVSAGAIPG 439
Query: 481 LMRMERVGSEHVKEKAKRML 500
++++ + GS +E A L
Sbjct: 440 IVQVLKKGSMEARENAAATL 459
Score = 40 (19.1 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 21/84 (25%), Positives = 37/84 (44%)
Query: 66 TFERACAHVCKTLGFTPTLVDGTTPDFSTVIPNLALKSTILNWCHKQSLNPPKP-LEFSS 124
T ++ C ++ + L + + + + I LK T++N K+++ K L+F S
Sbjct: 28 TVKKLCYNLARRLKLLVPMFEEIR-ESNEPISEDTLK-TLMNL--KEAMCSAKDYLKFCS 83
Query: 125 AEKLVRASMESSQSKGKAMAVSEK 148
+ ME Q K M VS K
Sbjct: 84 QGSKIYLVMEREQVTSKLMEVSVK 107
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 245 (91.3 bits), Expect = 7.3e-27, Sum P(2) = 7.3e-27
Identities = 73/275 (26%), Positives = 128/275 (46%)
Query: 233 VQKLKSPQVHEVEEALISLRKLTRSREETRVSLCTPXXXXXXXXXXXXXYTXXXXXXXXX 292
VQ+L S + A+ +R L++ + R+ +
Sbjct: 337 VQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNLLTSEDVATQENAITC 396
Query: 293 XXXXXXEKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXX 352
+ NK LI+ +G V IV VL AG+ EA+E+A +FSL+L D+NK IG
Sbjct: 397 VLNLSIYENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLADENKIIIGGSGA 456
Query: 353 XXXXXXXXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSG--H-MTGR 409
++ + R + D+A AL++L + N+ + V+ G V AL+ M++ H M
Sbjct: 457 IPALVDLLENGTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDE 516
Query: 410 VLLILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFK 469
L IL LA+ D + A++ + + L+G+L+ T+ + + +E+ ++L +L
Sbjct: 517 ALTILSVLANNQDAKSAIVKANTLPALIGILQ--TDQTRN-RENAAAILLSLCKRDTEKL 573
Query: 470 GLAAAAGMAEVLMRMERVGSEHVKEKAKRMLELMK 504
G LM + + G+E K KA +LEL++
Sbjct: 574 ITIGRLGAVVPLMDLSKNGTERGKRKAISLLELLR 608
Score = 130 (50.8 bits), Expect = 7.3e-27, Sum P(2) = 7.3e-27
Identities = 30/76 (39%), Positives = 41/76 (53%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLG-FTPTLVDGTTPDFSTVIPNLAL 101
P +FLCPVS LM DPV+V++G T+ERA G T +F T+ PN L
Sbjct: 242 PVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENF-TLTPNYVL 300
Query: 102 KSTILNWCHKQSLNPP 117
+S I WC + ++ P
Sbjct: 301 RSLISRWCAEHNIEQP 316
Score = 42 (19.8 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 13/56 (23%), Positives = 28/56 (50%)
Query: 429 DSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMAEVLMRM 484
+SG + + ++++ + S + + VS + +LS + L A AG VL+ +
Sbjct: 326 NSGDMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRILIAEAGAIPVLVNL 381
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 241 (89.9 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 76/276 (27%), Positives = 121/276 (43%)
Query: 233 VQKLKSPQVHEVEEALISLRKLTRSREETRVSLCTPXXX-XXXXXXXXXXYTXXXXXXXX 291
V KL S + + A+ +R L++ + R+ + T
Sbjct: 347 VCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVT 406
Query: 292 XXXXXXXEKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXX 351
+ NK LI+ +G V IV VL AGS EA+E+A +FSL+L D+NK IG
Sbjct: 407 CILNLSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGASG 466
Query: 352 XXXXXXXXXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMV---NSGHMTG 408
+ S R + D+A AL++L + + N+ + V+ G V L+ M+ +S M
Sbjct: 467 AIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSERMAD 526
Query: 409 RVLLILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRF 468
L IL LAS + A+L + + L+ L+K +E+ ++L L
Sbjct: 527 EALTILSVLASNQVAKTAILRANAIPPLIDCLQKD---QPRNRENAAAILLCLCKRDTEK 583
Query: 469 KGLAAAAGMAEVLMRMERVGSEHVKEKAKRMLELMK 504
G LM + R G+E K KA +LEL++
Sbjct: 584 LISIGRLGAVVPLMELSRDGTERAKRKANSLLELLR 619
Score = 133 (51.9 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 32/86 (37%), Positives = 43/86 (50%)
Query: 35 QKPQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACAHV---CKTLGFTPTLVDGTTPD 91
QK P +FLCP+S LM DP +VS+G T+ER+ C L T +
Sbjct: 236 QKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKT--QQKLEN 293
Query: 92 FSTVIPNLALKSTILNWCHKQSLNPP 117
F T+ PN L+S I WC K ++ P
Sbjct: 294 F-TLTPNYVLRSLISQWCTKHNIEQP 318
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 229 (85.7 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
Identities = 68/270 (25%), Positives = 122/270 (45%)
Query: 233 VQKLKSPQVHEVEEALISLRKLTRSREETRVSLCTPXXXXXXXXXXXXXYTXXXXXXXXX 292
V+ LKS A +R LT + E RV +
Sbjct: 478 VEDLKSGSNKVKTAAAAEIRHLTINSIENRVHIGRCGAITPLLSLLYSEEKLTQEHAVTA 537
Query: 293 XXXXXXEKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXX 352
++NK +IV G + P+V VL G+ A+E++ ++FSL++ N+ IG
Sbjct: 538 LLNLSISELNKAMIVEVGAIEPLVHVLNTGNDRAKENSAASLFSLSVLQVNRERIGQSNA 597
Query: 353 XXXXXXXXKSDSE-RTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSG-HMTGRV 410
R + D+A AL++LS+ N+ ++V+ +V L+ +++ M +
Sbjct: 598 AIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVELLDPDLEMVDKA 657
Query: 411 LLILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKG 470
+ +L NL++ +GR A++ GG+ LV + G S+ +E+ SVL L +F
Sbjct: 658 VALLANLSAVGEGRQAIVREGGIPLLVETVDLG---SQRGKENAASVLLQLCLNSPKFCT 714
Query: 471 LAAAAGMAEVLMRMERVGSEHVKEKAKRML 500
L G L+ + + G++ KEKA+++L
Sbjct: 715 LVLQEGAIPPLVALSQSGTQRAKEKAQQLL 744
Score = 104 (41.7 bits), Expect = 6.1e-22, Sum P(2) = 6.1e-22
Identities = 24/73 (32%), Positives = 33/73 (45%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVIPNLALK 102
P F CP+S LM DPV+V+SG TF+R G +IPN +K
Sbjct: 239 PPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNYTVK 298
Query: 103 STILNWCHKQSLN 115
+ I +W +N
Sbjct: 299 AMIASWLEANRIN 311
Score = 103 (41.3 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 39/162 (24%), Positives = 71/162 (43%)
Query: 300 KINKMLIVRSGL-VPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXX 358
++N+ I +S + +V++L G+ ++ A A+F+L++ NK I
Sbjct: 586 QVNRERIGQSNAAIQALVNLLGKGTFRGKKDAASALFNLSITHDNKARIVQAKAVKYLVE 645
Query: 359 XXKSDSERTQHDSALALY-HLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLILGNL 417
D E D A+AL +LS V R +V+ G + L+ V+ G G+ L
Sbjct: 646 LLDPDLEMV--DKAVALLANLSAVGEGRQAIVREGGIPLLVETVDLGSQRGKENAASVLL 703
Query: 418 ASCSDGR---VAVLDSGGVECLVGMLRKGTELSESTQESCVS 456
C + VL G + LV + + GT+ ++ + +S
Sbjct: 704 QLCLNSPKFCTLVLQEGAIPPLVALSQSGTQRAKEKAQQLLS 745
Score = 87 (35.7 bits), Expect = 2.4e-06, Sum P(2) = 2.4e-06
Identities = 29/138 (21%), Positives = 63/138 (45%)
Query: 328 EHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXKSDSERTQHDSALALYHLSLVK-SNRT 386
EH+ + ++ D + + KS S + + +A + HL++ NR
Sbjct: 449 EHSAAKTYECSVHDLDDSGTMTTSHTIKLVEDLKSGSNKVKTAAAAEIRHLTINSIENRV 508
Query: 387 KLVKLGSVNALLGMVNSGH-MTGR-VLLILGNLASCSDGRVAVLDSGGVECLVGMLRKGT 444
+ + G++ LL ++ S +T + L NL+ + +++ G +E LV +L G
Sbjct: 509 HIGRCGAITPLLSLLYSEEKLTQEHAVTALLNLSISELNKAMIVEVGAIEPLVHVLNTG- 567
Query: 445 ELSESTQESCVSVLYALS 462
++ +E+ + L++LS
Sbjct: 568 --NDRAKENSAASLFSLS 583
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 172 (65.6 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 62/209 (29%), Positives = 94/209 (44%)
Query: 299 EKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVX-XXXXXXX 357
E NK+ +V G++ IV VL GS + + A + SLA+ + NK IG
Sbjct: 166 EDDNKVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAISALV 225
Query: 358 XXXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLILGNL 417
+ ++R + +SA ALY L NR ++V GSV L+ +SG R + +LG L
Sbjct: 226 SLLRVGNDRERKESATALYALCSFPDNRKRVVDCGSVPILVEAADSG--LERAVEVLGLL 283
Query: 418 ASCSDGRVAVLD-SGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAG 476
C GR + SG VE LV +LR G + Q S + +L L G
Sbjct: 284 VKCRGGREEMSKVSGFVEVLVNVLRNGN--LKGIQYS-LFILNCLCCCSGEIVDEVKREG 340
Query: 477 MAEVLMRMERVGSEHVKEKAKRMLELMKG 505
+ E+ E SE ++ A ++ + G
Sbjct: 341 VVEICFGFEDNESEKIRRNATILVHTLLG 369
Score = 147 (56.8 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 42/123 (34%), Positives = 60/123 (48%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGF-TPTLVDGTTPDFSTVIPNLAL 101
P +F CP+S +M+DPV++ SGHTF+R G T + + +IPN AL
Sbjct: 6 PNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLIPNHAL 65
Query: 102 KSTILNWCH---KQSLNPPKPLEFSSAEKLVRASMESSQSKGKAMAV-SEKELIRGVKEK 157
+S ILN+ H K+S P E S ++ S SQS A + S L+R K
Sbjct: 66 RSLILNFAHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRLVRLTKRD 125
Query: 158 PSV 160
S+
Sbjct: 126 SSI 128
Score = 106 (42.4 bits), Expect = 5.6e-14, Sum P(2) = 5.6e-14
Identities = 47/189 (24%), Positives = 83/189 (43%)
Query: 306 IVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXKSDSE 365
+ SG V +D + + + QE + + +L+L+D NK + + S
Sbjct: 132 VTESGAVRAALDCVDSCNQVLQEKSLSLLLNLSLEDDNKVGLVADGVIRRIVTVLRVGSP 191
Query: 366 RTQHDSALALYHLSLVKSNRTKLVKL-GSVNALLGMVNSGHMTGRVLLILGNLASCS--D 422
+ +A L L++V+ N+ + +++AL+ ++ G+ R A CS D
Sbjct: 192 DCKAIAATLLTSLAVVEVNKATIGSYPDAISALVSLLRVGNDRERKESATALYALCSFPD 251
Query: 423 GRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYAL--SHGGLRFKGLAAAAGMAEV 480
R V+D G V LV E ++S E V VL L GG + ++ +G EV
Sbjct: 252 NRKRVVDCGSVPILV-------EAADSGLERAVEVLGLLVKCRGGR--EEMSKVSGFVEV 302
Query: 481 LMRMERVGS 489
L+ + R G+
Sbjct: 303 LVNVLRNGN 311
Score = 77 (32.2 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 36/146 (24%), Positives = 70/146 (47%)
Query: 361 KSDSERTQHDSALALYHLSLVKSN-RTKLVKLGSVNALLGMVNSGH--MTGRVLLILGNL 417
+S S ++ +S L L+ S+ R K+ + G+V A L V+S + + + L +L NL
Sbjct: 104 QSSSNASKLESLTRLVRLTKRDSSIRRKVTESGAVRAALDCVDSCNQVLQEKSLSLLLNL 163
Query: 418 ASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGM 477
+ D +V ++ G + +V +LR G S + ++L +L+ + + +
Sbjct: 164 SLEDDNKVGLVADGVIRRIVTVLRVG---SPDCKAIAATLLTSLAVVEVNKATIGSYPDA 220
Query: 478 AEVLMRMERVGSEHV-KEKAKRMLEL 502
L+ + RVG++ KE A + L
Sbjct: 221 ISALVSLLRVGNDRERKESATALYAL 246
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 273 (101.2 bits), Expect = 7.8e-21, P = 7.8e-21
Identities = 81/293 (27%), Positives = 135/293 (46%)
Query: 217 PQTLNHPNS-NEQED---YFVQKLKSPQVHEVEEALISLRKLTRSREETRVSLCTPXXXX 272
P+ P+S NEQ+D V+ L S Q+ E ++ +R L R E RV +
Sbjct: 365 PEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIP 424
Query: 273 XXXXXXXXXYTXXXXXXXXXXXXXXXEKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACG 332
+ +++NK LI G +P I+++L G+ EA+E++
Sbjct: 425 LLVQLLSYPDSGIQENAVTTLLNLSIDEVNKKLISNEGAIPNIIEILENGNREARENSAA 484
Query: 333 AIFSLALDDQNKTAIGVXXXXXXXXXXXKSDSERTQHDSALALYHLSLVKSNRTKLVKLG 392
A+FSL++ D+NK IG+ + + R + D+ AL++LSL +N+ + + G
Sbjct: 485 ALFSLSMLDENKVTIGLSNGIPPLVDLLQHGTLRGKKDALTALFNLSLNSANKGRAIDAG 544
Query: 393 SVNALLGMVNSGH--MTGRVLLILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSEST 450
V LL ++ + M L IL LAS +GR A+ +E LV +R+GT
Sbjct: 545 IVQPLLNLLKDKNLGMIDEALSILLLLASHPEGRQAIGQLSFIETLVEFIRQGTP---KN 601
Query: 451 QESCVSVLYALSHGGLRFKGLAAAAGMAEVLMRMERVGSEHVKEKAKRMLELM 503
+E SVL L F A G+ E L+ + G+ + KA +++L+
Sbjct: 602 KECATSVLLELGSNNSSFILAALQFGVYEYLVEITTSGTNRAQRKANALIQLI 654
Score = 138 (53.6 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 35/123 (28%), Positives = 60/123 (48%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVIPNLALK 102
P EFLCP++ +M DPV++++G T+E+ G D ++ PN ALK
Sbjct: 291 PHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALK 350
Query: 103 STILNWCHKQSLN-PPKPLEFSSAEK------LVRASMESSQSKGKAMAVSEKELIRGVK 155
+ I+ WC K + P K + S + L+ ++ SSQ + + +V + L+ +
Sbjct: 351 NLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLL--AR 408
Query: 156 EKP 158
E P
Sbjct: 409 ENP 411
>TAIR|locus:2096687 [details] [associations]
symbol:AT3G01400 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AC010870 ProtClustDB:CLSN2686276 IPI:IPI00535994
RefSeq:NP_566136.1 UniGene:At.20281 ProteinModelPortal:Q9SGH8
SMR:Q9SGH8 PRIDE:Q9SGH8 EnsemblPlants:AT3G01400.1 GeneID:821320
KEGG:ath:AT3G01400 TAIR:At3g01400 InParanoid:Q9SGH8 OMA:VAELECP
PhylomeDB:Q9SGH8 Genevestigator:Q9SGH8 Uniprot:Q9SGH8
Length = 355
Score = 242 (90.2 bits), Expect = 1.9e-18, P = 1.9e-18
Identities = 68/284 (23%), Positives = 131/284 (46%)
Query: 224 NSNEQEDYFVQKLKSP-QVHEVEEALISLRKLTRSREETRVSLCTPXXXXXXXXXXXXXY 282
NS++ ++ V L S + E ++A + +R L++++ E R+ +
Sbjct: 59 NSDDLINHLVSHLDSSYSIDEQKQAAMEIRLLSKNKPENRIKIAKAGAIKPLISLISSSD 118
Query: 283 TXXXXXXXXXXXXXXXEKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQ 342
NK I SG + P+V L G+ A+E+A A+ L+ ++
Sbjct: 119 LQLQEYGVTAILNLSLCDENKESIASSGAIKPLVRALKMGTPTAKENAACALLRLSQIEE 178
Query: 343 NKTAIGVXXXXXXXXXXXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLG-MV 401
NK AIG ++ R + D++ ALY L K N+ + V+ G + L+ M
Sbjct: 179 NKVAIGRSGAIPLLVNLLETGGFRAKKDASTALYSLCSAKENKIRAVQSGIMKPLVELMA 238
Query: 402 NSG-HMTGRVLLILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYA 460
+ G +M + ++ L S + + A+++ GGV LV ++ GT+ + E VS+L
Sbjct: 239 DFGSNMVDKSAFVMSLLMSVPESKPAIVEEGGVPVLVEIVEVGTQRQK---EMAVSILLQ 295
Query: 461 LSHGGLRFKGLAAAAGMAEVLMRMERVGSEHVKEKAKRMLELMK 504
L + ++ + A G L+ + + G+ K+KA+ ++EL++
Sbjct: 296 LCEESVVYRTMVAREGAIPPLVALSQAGTSRAKQKAEALIELLR 339
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 157 (60.3 bits), Expect = 7.4e-17, Sum P(3) = 7.4e-17
Identities = 46/205 (22%), Positives = 96/205 (46%)
Query: 302 NKMLIVRS-GLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXX 360
NK L+ + ++P ++D L G+ + +A AIF+L+ D NK IG
Sbjct: 249 NKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSALDSNKVLIGKSGILKPLIDLL 308
Query: 361 KSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLILGNLASC 420
+ + D A A++ L + NR++ V+ G+V L +++G +L IL L +
Sbjct: 309 EEGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISNGLYVDELLAILAMLVTH 368
Query: 421 SDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGG-LRFKGLAAAAGMAE 479
+ + GGV L+ + R+ +E + +E+ + +L+ + ++K +
Sbjct: 369 WKAVEELGELGGVSWLLKITRE-SECKRN-KENAIVILHTICFSDRTKWKEIKEEENAHG 426
Query: 480 VLMRMERVGSEHVKEKAKRMLELMK 504
+ ++ R G+ + KA +L+ ++
Sbjct: 427 TITKLSREGTSRAQRKANGILDRLR 451
Score = 125 (49.1 bits), Expect = 7.4e-17, Sum P(3) = 7.4e-17
Identities = 29/86 (33%), Positives = 43/86 (50%)
Query: 30 KAHQLQKPQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGF-TPTLVDGT 88
K+ L+ +T P EF CP+S LM DPVV++SG T+++ + G T
Sbjct: 62 KSSSLEMLETVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQV 121
Query: 89 TPDFSTVIPNLALKSTILNWCHKQSL 114
P + + PNL ++ I WC K L
Sbjct: 122 LPH-TALTPNLLIREMISKWCKKNGL 146
Score = 53 (23.7 bits), Expect = 5.9e-06, Sum P(3) = 5.9e-06
Identities = 21/103 (20%), Positives = 45/103 (43%)
Query: 365 ERTQHDSALALYHLSLVKSNRTKLV--KLGSVNALLGMVNSGHMTGR--VLLILGNLASC 420
E+ Q D L ++S+ + KLV + L+ + G + R + L++
Sbjct: 229 EKLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAIFTLSAL 288
Query: 421 SDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSH 463
+V + SG ++ L+ +L +G L+ + + L ++H
Sbjct: 289 DSNKVLIGKSGILKPLIDLLEEGNPLAIKDVAAAIFTL-CIAH 330
Score = 40 (19.1 bits), Expect = 7.4e-17, Sum P(3) = 7.4e-17
Identities = 19/59 (32%), Positives = 27/59 (45%)
Query: 215 LEPQTLNHPNS-NEQE-------DYF---VQKLKSPQVHEVEEALISLRKLTRSREETR 262
LE ++ HPN NE E + F + K+ S + + + A LR LTR E R
Sbjct: 146 LETKSQYHPNLVNEDETVTRSDREIFNSLLCKVSSSNLQDQKSAAKELRLLTRKGTEFR 204
>TAIR|locus:2178818 [details] [associations]
symbol:AT5G58680 "AT5G58680" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009693 "ethylene
biosynthetic process" evidence=RCA] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
EMBL:CP002688 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
EMBL:AY084344 EMBL:DQ447090 IPI:IPI00540553 RefSeq:NP_200676.1
UniGene:At.29268 ProteinModelPortal:Q8LGC7 SMR:Q8LGC7
EnsemblPlants:AT5G58680.1 GeneID:835982 KEGG:ath:AT5G58680
TAIR:At5g58680 HOGENOM:HOG000084464 InParanoid:Q8LGC7 OMA:LCSTNEN
PhylomeDB:Q8LGC7 ProtClustDB:CLSN2686276 Genevestigator:Q8LGC7
Uniprot:Q8LGC7
Length = 357
Score = 221 (82.9 bits), Expect = 8.4e-16, P = 8.4e-16
Identities = 68/285 (23%), Positives = 128/285 (44%)
Query: 224 NSNEQEDYFVQKLKSPQ-VHEVEEALISLRKLTRSREETRVSLCTPXXXXXXXXXXXXXY 282
NS++ + L+S + E ++A + +R L++++ E R+ L
Sbjct: 57 NSDDVIRNLITHLESSSSIEEQKQAAMEIRLLSKNKPENRIKLAKAGAIKPLVSLISSSD 116
Query: 283 TXXXXXXXXXXXXXXXEKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQ 342
NK +IV SG V P+V+ L G+ +E+A A+ L+ ++
Sbjct: 117 LQLQEYGVTAVLNLSLCDENKEMIVSSGAVKPLVNALRLGTPTTKENAACALLRLSQVEE 176
Query: 343 NKTAIGVXXXXXXXXXXXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLG-MV 401
NK IG ++ R + D++ ALY L N+T+ V+ G + L+ M+
Sbjct: 177 NKITIGRSGAIPLLVNLLENGGFRAKKDASTALYSLCSTNENKTRAVESGIMKPLVELMI 236
Query: 402 N-SGHMTGRVLLILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYA 460
+ M + ++ L S + + AV++ GGV LV ++ GT+ + E VS+L
Sbjct: 237 DFESDMVDKSAFVMNLLMSAPESKPAVVEEGGVPVLVEIVEAGTQRQK---EISVSILLQ 293
Query: 461 LSHGGLRFKGLAAAAGMAEVLMRMER-VGSEHVKEKAKRMLELMK 504
L + ++ + A G L+ + + S K KA+ ++EL++
Sbjct: 294 LCEESVVYRTMVAREGAVPPLVALSQGSASRGAKVKAEALIELLR 338
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 146 (56.5 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 41/131 (31%), Positives = 61/131 (46%)
Query: 32 HQLQKPQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGF-TPTLVDGTTP 90
+ + Q PP E CP+S LM DPV+++SG T+ER C + G T P
Sbjct: 262 NSINSGQMPVPPEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLP 321
Query: 91 DFSTVIPNLALKSTILNWCHKQSLNPPK-PLEFSSAE--KLVRASMESSQSKGKAMAVSE 147
S + PN +K I +WC + P P E + +L + ES++S+ S
Sbjct: 322 HIS-LTPNNCVKGLIASWCEQNGTQIPSGPPESQDLDYWRLALSDSESTKSQSVNSIGSY 380
Query: 148 KELIRGVKEKP 158
K ++GVK P
Sbjct: 381 K--LKGVKIVP 389
Score = 134 (52.2 bits), Expect = 9.6e-16, Sum P(2) = 9.6e-16
Identities = 53/208 (25%), Positives = 97/208 (46%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
NK L++ SG++ + M SAE+ A +L+ D+ K+ IG +
Sbjct: 504 NKELMLTSGVIRLLEK--MISSAESHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLLQ 561
Query: 362 SDSE-RTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNS-GH--MTGRVLLILGNL 417
+ E + + D+ ALY+LS N L+ + +L G++ S G + L +L NL
Sbjct: 562 KEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQGLLASTGENLWIEKSLAVLLNL 621
Query: 418 ASCSDGRVAVLDSGGVECLVGMLRKGTELSEST-QESCVSVLYALSHGGLRFKGLAAAAG 476
AS +G+ + S G ++ L ++ ++T QE VS L L +G + G
Sbjct: 622 ASSQEGKDEAVSSQG---MISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEG 678
Query: 477 MAEVLMRMERVGSEHVKEKAKRMLELMK 504
+ L+ + G+ +EK++++L L +
Sbjct: 679 VIPSLVSISVNGTPRGREKSQKLLMLFR 706
Score = 88 (36.0 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
Identities = 34/104 (32%), Positives = 52/104 (50%)
Query: 363 DSERTQHDS-ALALYHLSLVKSNRTKLVKL--GSVNALLGMVNSGHMTGRVLLILGNLAS 419
D+ DS A+AL++L+ V +NR K + L G + L M++S G + NL S
Sbjct: 481 DNNAAAQDSGAMALFNLA-VNNNRNKELMLTSGVIRLLEKMISSAESHGSATALYLNL-S 538
Query: 420 CSDGRVAVLDSG-GVECLVGMLRKGTELSESTQESCVSVLYALS 462
C D +V+ S V LV +L+K E+ + + LY LS
Sbjct: 539 CLDEAKSVIGSSQAVPFLVQLLQK--EIETQCKLDALHALYNLS 580
Score = 73 (30.8 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 46/189 (24%), Positives = 81/189 (42%)
Query: 323 SAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXKSDSERTQHDSALALY-HLSLV 381
+A AQ+ A+F+LA+++ + + S +E H SA ALY +LS +
Sbjct: 483 NAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRLLEKMISSAE--SHGSATALYLNLSCL 540
Query: 382 KSNRTKLVKLGSVNALLGMVNSGHMTG---RVLLILGNLASCSDGRVAVLDSGGVECLVG 438
++ + +V L+ ++ T L L NL++ S A+L S ++ L G
Sbjct: 541 DEAKSVIGSSQAVPFLVQLLQKEIETQCKLDALHALYNLSTYSPNIPALLSSNIIKSLQG 600
Query: 439 MLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMAEVLMRMERVGSEHVKEKAKR 498
+L E E ++VL L+ ++ GM L + +G +E+A
Sbjct: 601 LLASTGE--NLWIEKSLAVLLNLASSQEGKDEAVSSQGMISSLATVLDMGDTTEQEQAVS 658
Query: 499 -MLELMKGR 506
+L L GR
Sbjct: 659 CLLILCNGR 667
Score = 49 (22.3 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 17/71 (23%), Positives = 32/71 (45%)
Query: 422 DGRVAVLDSGGVECLVGMLRKGTELSEST-QESCVSVLYALSHGGLRFKGLAAAAGMAEV 480
+ R+ + +G VE L+ L + + + Q+S L+ L+ R K L +G+ +
Sbjct: 457 EARIFMGANGFVEALLRFLGSAVDDNNAAAQDSGAMALFNLAVNNNRNKELMLTSGVIRL 516
Query: 481 LMRMERVGSEH 491
L +M H
Sbjct: 517 LEKMISSAESH 527
>TAIR|locus:2130699 [details] [associations]
symbol:AT4G16490 "AT4G16490" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0006816
"calcium ion transport" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0009651 "response to salt stress"
evidence=RCA] InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514
PROSITE:PS50176 SMART:SM00185 EMBL:CP002687 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 IPI:IPI00531461
RefSeq:NP_567501.4 UniGene:At.23147 UniGene:At.75353
ProteinModelPortal:F4JMH0 SMR:F4JMH0 EnsemblPlants:AT4G16490.1
GeneID:827347 KEGG:ath:AT4G16490 OMA:DLQPTVK Uniprot:F4JMH0
Length = 472
Score = 217 (81.4 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 60/207 (28%), Positives = 105/207 (50%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
NK +I G + +V VL G+ ++++A A+ SLAL ++NK +IG
Sbjct: 258 NKAVIAAGGAIKSLVWVLKTGTETSKQNAACALLSLALLEENKGSIGACGAIPPLVSLLL 317
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMV-NSGH-MTGRVLLILGNLAS 419
+ S R + D+ LY L ++ N+ + V G+V L+ +V G M + +++L +LA+
Sbjct: 318 NGSCRGKKDALTTLYKLCTLQQNKERAVTAGAVKPLVDLVAEEGTGMAEKAMVVLSSLAA 377
Query: 420 CSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMAE 479
DG+ A+++ GG+ LV + G S +E + L L +R +GL G
Sbjct: 378 IDDGKEAIVEEGGIAALVEAIEDG---SVKGKEFAILTLLQLCSDSVRNRGLLVREGAIP 434
Query: 480 VLMRMERVGSEHV--KEKAKRMLELMK 504
L+ + + GS V K KA+R+L ++
Sbjct: 435 PLVGLSQSGSVSVRAKRKAERLLGYLR 461
Score = 173 (66.0 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 54/206 (26%), Positives = 102/206 (49%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
N++LI SG + ++ +L QEHA A+ +L+L DQNK I K
Sbjct: 217 NRVLIGESGAIQALIPLLRCNDPWTQEHAVTALLNLSLHDQNKAVIAAGGAIKSLVWVLK 276
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGR--VLLILGNLAS 419
+ +E ++ ++A AL L+L++ N+ + G++ L+ ++ +G G+ L L L +
Sbjct: 277 TGTETSKQNAACALLSLALLEENKGSIGACGAIPPLVSLLLNGSCRGKKDALTTLYKLCT 336
Query: 420 CSDGRVAVLDSGGVECLVGML-RKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMA 478
+ + +G V+ LV ++ +GT ++E +S L A+ G + + G+A
Sbjct: 337 LQQNKERAVTAGAVKPLVDLVAEEGTGMAEKAMV-VLSSLAAIDDGK---EAIVEEGGIA 392
Query: 479 EVLMRMERVGSEHVKEKAKRMLELMK 504
++ +E GS VK K +L L++
Sbjct: 393 ALVEAIED-GS--VKGKEFAILTLLQ 415
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 138 (53.6 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 34/103 (33%), Positives = 50/103 (48%)
Query: 42 PPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPT-LVDGTTPDFSTVIPNLA 100
PP E CP+S LM DPV+++SG T+ER C + G P S + PN
Sbjct: 275 PPEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLS-LTPNYC 333
Query: 101 LKSTILNWCHKQSLN----PPKPLEFSSAEKLVRASMESSQSK 139
+K I +WC + + PP+ L+ + +L + ES SK
Sbjct: 334 VKGLIASWCEQNGITVPTGPPESLDLNYW-RLAMSDSESPNSK 375
Score = 129 (50.5 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 47/207 (22%), Positives = 102/207 (49%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
NK L++ SG++P +++ +++ S ++Q A +L+ ++ K IG
Sbjct: 504 NKELMLTSGVIP-LLEKMISCS-QSQGPATALYLNLSCLEKAKPVIGSSQAVSFFVNLLL 561
Query: 362 SDSE-RTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSG-HM-TGRVLLILGNLA 418
D++ + + D+ ALY+LS N L+ + +L + ++G H+ + L +L NLA
Sbjct: 562 QDTKTQCKLDALHALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHLWIEKSLAVLLNLA 621
Query: 419 SCSDGRVAVLDSGG-VECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGM 477
S +G+ ++ + G + L +L G + + SC+ +L S ++ + G+
Sbjct: 622 SSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQ---MVLQEGV 678
Query: 478 AEVLMRMERVGSEHVKEKAKRMLELMK 504
L+ + GS ++K++++L L +
Sbjct: 679 IPSLVSISVNGSPRGRDKSQKLLMLFR 705
Score = 50 (22.7 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 48/211 (22%), Positives = 84/211 (39%)
Query: 303 KMLIVRSGLVPPIVDVLMAG----SAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXX 358
++L+ +G V + L + +A AQE A+F+LA+++ + +
Sbjct: 459 RILMGANGFVEAFLQFLESAVHDNNAAAQETGAMALFNLAVNNNRNKELMLTSGVIPLLE 518
Query: 359 XXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRV------LL 412
S S+ A ALY L+L + K V +GS A+ VN + L
Sbjct: 519 KMISCSQ--SQGPATALY-LNLSCLEKAKPV-IGSSQAVSFFVNLLLQDTKTQCKLDALH 574
Query: 413 ILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLA 472
L NL++ S +L S ++ L + G L E ++VL L+ + +
Sbjct: 575 ALYNLSTYSPNIPTLLSSNIIKSLQVLASTGNHL---WIEKSLAVLLNLASSREGKEEMI 631
Query: 473 AAAGMAEVLMRMERVGSEHVKEKAKRMLELM 503
GM L + G +E+A L ++
Sbjct: 632 TTQGMISTLATVLDTGDTVEQEQAVSCLVIL 662
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 138 (53.6 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 53/211 (25%), Positives = 94/211 (44%)
Query: 300 KINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXX--XXXXX 357
K N+ I +G +P + +L + +A AQE++ A+ +L++ ++NK+ I
Sbjct: 438 KENRAYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIYEKNKSRIMEEGDCLESIVS 497
Query: 358 XXXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGS-VNALLGMVNSGHMTGR--VLLIL 414
+ Q ++A L+ LS V + ++ + V AL ++ +G G+ + L
Sbjct: 498 VLVSGLTVEAQENAAATLFSLSAVHEYKKRIAIVDQCVEALALLLQNGTPRGKKDAVTAL 557
Query: 415 GNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAA 474
NL++ D +++ GGV LVG L+ +E E L L L + +
Sbjct: 558 YNLSTHPDNCSRMIEGGGVSSLVGALK-----NEGVAEEAAGALALLVRQSLGAEAIGKE 612
Query: 475 AGMAEVLMRMERVGSEHVKEKA-KRMLELMK 504
LM M R G+ KE A +LEL +
Sbjct: 613 DSAVAGLMGMMRCGTPRGKENAVAALLELCR 643
Score = 123 (48.4 bits), Expect = 8.3e-14, Sum P(2) = 8.3e-14
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVIPNLALK 102
P +F+CP+S LM DPV++S+G T++R G G S ++PN ALK
Sbjct: 306 PKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIVPNRALK 365
Query: 103 STILNWCHKQSLNPPKPLEFSSAEKLVRA-SMESSQSKGKA-MAVSEKELIRGVKEKPSV 160
+ I+ WC ++ S E A +++ KA +++ K L G + +V
Sbjct: 366 NLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGSQAAQTV 425
Query: 161 S 161
+
Sbjct: 426 A 426
Score = 54 (24.1 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 34/171 (19%), Positives = 64/171 (37%)
Query: 303 KMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXKS 362
K + + V + +L G+ ++ A A+++L+ N + + K+
Sbjct: 526 KRIAIVDQCVEALALLLQNGTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKN 585
Query: 363 DSERTQHDSALALY-HLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLILGNLASCS 421
+ + ALAL SL K + +V L+GM+ G G+ + L C
Sbjct: 586 EGVAEEAAGALALLVRQSLGAEAIGK--EDSAVAGLMGMMRCGTPRGKENAVAALLELCR 643
Query: 422 DGRVAVLDSG-GVECLVGMLRK----GTELSESTQESCVSVLYALSHGGLR 467
G AV + + G+L+ GT+ + S V + +R
Sbjct: 644 SGGAAVAEKVLRAPAIAGLLQTLLFTGTKRARRKAASLARVFQRRENAAMR 694
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 134 (52.2 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 37/114 (32%), Positives = 55/114 (48%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVIPNLALK 102
P EF CP+S LM DPVV S+G T++R G + G T ++PN AL+
Sbjct: 298 PKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLVPNRALR 357
Query: 103 STILNWCHKQSLNPPKPLEFSSAEKLVRASMESSQSKGKAMAVSEKELIRGVKE 156
S I WC L P + V AS SS++ +A + + L+R +++
Sbjct: 358 SLISQWCGVYGLQYDSPESNEGMAECVAASC-SSRAAMEANKATARILVRMLED 410
Score = 123 (48.4 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 57/247 (23%), Positives = 112/247 (45%)
Query: 302 NKMLIV-RSGLVPPIVDVLMAG-SAEAQEHACGAIFSLAL-DDQNKTAIGVXXXXXXXXX 358
NK I+ + G + IV VL G + EA+E+A +FSL++ + K +
Sbjct: 474 NKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATLFSLSVVHNFKKLIMNEPGAVEELAS 533
Query: 359 XXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLILGNLA 418
+ R + D+ +AL++LS + ++++ +V AL+ + + ++ L L
Sbjct: 534 MLTKGTSRGKKDAVMALFNLSTHPESSARMLESCAVVALIQSLRNDTVSEEAAGALALLM 593
Query: 419 SCSDGRVAVLDSGG--VECLVGMLRKGTELSESTQESCVSVLYALSH-GGLRF-KGLAAA 474
V ++ S + LVG++R+GT + E+ VS LY + GG + +A
Sbjct: 594 K-QPSIVHLVGSSETVITSLVGLMRRGTPKGK---ENAVSALYEICRRGGSALVQRVAKI 649
Query: 475 AGMAEVLMRMERVGSEHVKEKAKRMLELMKGRAXXXXXGVDWD-ELLDSGLVSRSRFR-- 531
G+ V+ + G++ K+KA ++++ + + ++D LV + R
Sbjct: 650 PGLNTVIQTITLNGTKRAKKKASLIVKMCQRSQMPSAMALGSTLTVVDRSLVGNNTLRRA 709
Query: 532 LGYGRGE 538
+G GE
Sbjct: 710 ASFGSGE 716
Score = 110 (43.8 bits), Expect = 5.1e-12, Sum P(2) = 5.1e-12
Identities = 41/156 (26%), Positives = 73/156 (46%)
Query: 300 KINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXX 359
K N+ I G +P + +L++ AQE+A A+ +L++ + NK I
Sbjct: 431 KQNRAFIADLGAIPLLCRLLLSNDWMAQENAVTALLNLSIFEPNKGRIMEQEGCLRLIVG 490
Query: 360 XKSDSERTQ--HDSALALYHLSLVKSNRTKLV--KLGSVNALLGMVNSGHMTGR--VLLI 413
+ T+ ++A L+ LS+V N KL+ + G+V L M+ G G+ ++
Sbjct: 491 VLQNGWTTEAKENAAATLFSLSVVH-NFKKLIMNEPGAVEELASMLTKGTSRGKKDAVMA 549
Query: 414 LGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSES 449
L NL++ + +L+S V L+ LR T E+
Sbjct: 550 LFNLSTHPESSARMLESCAVVALIQSLRNDTVSEEA 585
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 130 (50.8 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 49/208 (23%), Positives = 90/208 (43%)
Query: 302 NKMLIVRSGLVPPIVDV-LMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXX 360
NK +I + LV P++ L G+ E + +A + SL+ D NK IG
Sbjct: 243 NKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLI 302
Query: 361 KSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLILGNLASC 420
+ ++ +++L +V N+ K+V G ++A + +G +L +L L S
Sbjct: 303 EEGDLLATKEATSTVFNLCIVLENKGKVVSAGLIHAATKKIKAGSNVDELLSLLA-LIST 361
Query: 421 SDGRVAVLDS-GGVECLVGMLRKGTELSESTQESCVSV---LYALSHGGLRFKGLAAAAG 476
+ V +D G + L +LRK + L T E+ V + +Y + R K +
Sbjct: 362 HNRAVEEMDKLGFIYDLFSILRKPSSLL--TGENAVVIVFNMYDRNRDRSRLKVVGEEEN 419
Query: 477 MAEVLMRMERVGSEHVKEKAKRMLELMK 504
++ + GS KA+ +L+ +K
Sbjct: 420 QHGTFTKLAKQGSVRAARKAQGILQWIK 447
Score = 109 (43.4 bits), Expect = 4.7e-12, Sum P(2) = 4.7e-12
Identities = 37/127 (29%), Positives = 59/127 (46%)
Query: 41 EPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFS--TVIPN 98
E P EF+C +S ++M +PV+++SG T+E+ ++ + L T T S IPN
Sbjct: 71 EVPKEFICTLSNTIMIEPVIIASGQTYEKR--YITEWLKHERTCPK-TKQVLSHRLWIPN 127
Query: 99 LALKSTILNWCHKQSLNPPKPLEFSSAEKL---VRASME--SSQSKGKAMAVSEKELIRG 153
+ I WC + KP + AE + A ++ SS S + KEL
Sbjct: 128 HLISDLITQWCLVNKYDHQKPSDELVAELFTSDIEALLQRVSSSSSVADQIEAAKELRHQ 187
Query: 154 VKEKPSV 160
K+ P+V
Sbjct: 188 TKKFPNV 194
Score = 107 (42.7 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 33/143 (23%), Positives = 66/143 (46%)
Query: 311 LVPPI--VDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXX-XXXXXXKSDSERT 367
L+ P+ +D + S E QE+ A+F+L++ + NKT I K ++ T
Sbjct: 209 LLSPLSTLDEAVDSSLELQENIVTALFNLSILESNKTVIAENCLVIPLLTKSLKQGTDET 268
Query: 368 QHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHM--TGRVLLILGNLASCSDGRV 425
+ ++A L LS + SN+ + +V AL+ ++ G + T + NL + +
Sbjct: 269 RRNAAATLSSLSAIDSNKIIIGNSEAVKALIDLIEEGDLLATKEATSTVFNLCIVLENKG 328
Query: 426 AVLDSGGVECLVGMLRKGTELSE 448
V+ +G + ++ G+ + E
Sbjct: 329 KVVSAGLIHAATKKIKAGSNVDE 351
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 132 (51.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 36/125 (28%), Positives = 59/125 (47%)
Query: 38 QTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVIP 97
Q + PP E CP+S LM DPV+++SG T+ER C + G + P
Sbjct: 275 QMSVPPEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTP 334
Query: 98 NLALKSTILNWCHKQSLN----PPKPLEFSSAEKLVRASMESSQSKGKAMAVSEKELIRG 153
N +K+ I +WC + + PP+ L+ + +L + ES+ ++ S K ++
Sbjct: 335 NYCVKALISSWCEQNGVQVPDGPPESLDLNYW-RLALSVSESTDTRSAKRVGSCK--LKD 391
Query: 154 VKEKP 158
VK P
Sbjct: 392 VKVVP 396
Score = 107 (42.7 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 51/211 (24%), Positives = 98/211 (46%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALD----DQNKTAIGVXXXXXXXX 357
NK L++ SG++P + ++L H+ G++ ++ L+ ++ K IG
Sbjct: 502 NKELMLASGIIPLLEEML------CNPHSHGSVTAIYLNLSCLEEAKPVIGSSLAVPFMV 555
Query: 358 XXXKSDSE-RTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHM--TGRVLLIL 414
+++E + + D+ +L+HLS N L+ VNAL + S T + L +L
Sbjct: 556 NLLWTETEVQCKVDALHSLFHLSTYPPNIPCLLSADLVNALQSLTISDEQRWTEKSLAVL 615
Query: 415 GNLASCSDGRVAVLDSGG-VECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAA 473
NL G+ ++ + V L +L G E +E QE VS+L L + +
Sbjct: 616 LNLVLNEAGKDEMVSAPSLVSNLCTILDTG-EPNE--QEQAVSLLLILCNHSEICSEMVL 672
Query: 474 AAGMAEVLMRMERVGSEHVKEKAKRMLELMK 504
G+ L+ + G++ +E+A+++L L +
Sbjct: 673 QEGVIPSLVSISVNGTQRGRERAQKLLTLFR 703
Score = 72 (30.4 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 31/99 (31%), Positives = 49/99 (49%)
Query: 368 QHDSALALYHLSLVKSNRTKLVKLGS--VNALLGMVNSGHMTGRVLLILGNLASCSDGRV 425
Q A+AL++L+ V +NR K + L S + L M+ + H G V I NL+ + +
Sbjct: 485 QKVGAMALFNLA-VDNNRNKELMLASGIIPLLEEMLCNPHSHGSVTAIYLNLSCLEEAKP 543
Query: 426 AVLDSGGVECLVGMLRKGTELSESTQESC-VSVLYALSH 463
+ S V +V +L TE T+ C V L++L H
Sbjct: 544 VIGSSLAVPFMVNLL--WTE----TEVQCKVDALHSLFH 576
Score = 52 (23.4 bits), Expect = 9.1e-06, Sum P(2) = 9.1e-06
Identities = 20/66 (30%), Positives = 34/66 (51%)
Query: 422 DGRVAVLDSGGVECLVGMLRKGTELSE---STQESCVSVLYALSHGGLRFKGLAAAAGMA 478
+ R+ + ++G VE L+ L G+ L+E S Q+ L+ L+ R K L A+G+
Sbjct: 455 EARILMGENGCVEALLQFL--GSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGII 512
Query: 479 EVLMRM 484
+L M
Sbjct: 513 PLLEEM 518
Score = 48 (22.0 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 26/104 (25%), Positives = 46/104 (44%)
Query: 303 KMLIVRSGLVPPIVDVLMAG----SAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXX 358
++L+ +G V ++ L + +A AQ+ A+F+LA+D+ + +
Sbjct: 457 RILMGENGCVEALLQFLGSALNENNASAQKVGAMALFNLAVDNNRNKELMLASGIIPLLE 516
Query: 359 XXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVN 402
+ H S A+Y L+L K V +GS A+ MVN
Sbjct: 517 EMLCNPH--SHGSVTAIY-LNLSCLEEAKPV-IGSSLAVPFMVN 556
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 133 (51.9 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 45/160 (28%), Positives = 84/160 (52%)
Query: 315 IVDVLMAGSA-EAQEHACGAIFSLA-LDDQNKTAIGVXXXXXXXXXXXKS-D-SERTQHD 370
IV+VL G+ E++++A A+F L+ L D ++ + KS D + + +
Sbjct: 464 IVEVLNDGARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAKRN 523
Query: 371 SALALYHLSLVK-SNRTKLVKLGSVNALLGMVNSGHMTGRV----LLILGNLASCSDGRV 425
+ +A+ L + + N +++ G V LL +V S ++ V + IL +A DG +
Sbjct: 524 ALIAIRSLLMNQPDNHWRILAAGIVPVLLDLVKSEEISDGVTADSMAILAKMAEYPDGMI 583
Query: 426 AVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGG 465
+VL GG++ V +L +E+S +T++ CV++L L H G
Sbjct: 584 SVLRRGGLKLAVKILGS-SEVSPATKQHCVALLLNLCHNG 622
Score = 94 (38.1 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 29/111 (26%), Positives = 54/111 (48%)
Query: 48 CPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVIPNLALKSTILN 107
CP+S +M+DPVV+ SGHT++R+ G G T + ++ N ++K I +
Sbjct: 284 CPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQS 343
Query: 108 WCHKQSLNPPKPLEFSSAEKLVRASMESSQSKGKAMA-VSEKELIRGVKEK 157
+ + + + +K+ A +++ GK A ELI+G +E+
Sbjct: 344 YSKQNGV----VMGQKGKKKVDVAESLAAEEAGKLTAEFLAGELIKGDEEE 390
Score = 81 (33.6 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 42/202 (20%), Positives = 89/202 (44%)
Query: 306 IVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAI-GVXXXXXXXXXXXKSDS 364
+V +G+V ++ +L + QE+A I +L+ D KT I G +D
Sbjct: 412 LVEAGVVESLMKILRSDDPRIQENAMAGIMNLSKDIAGKTRIVGEDGGGLRLIVEVLNDG 471
Query: 365 ER--TQHDSALALYHLSLVKSNRTKLVKLG-SVNALLGMVNS---GHMTGR--VLLILGN 416
R ++ +A AL++LS + + ++ ++ L+ +V S G R ++ I
Sbjct: 472 ARRESRQYAAAALFYLSSLGDYSRLIGEISDAIPGLVRIVKSCDYGDSAKRNALIAIRSL 531
Query: 417 LASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAG 476
L + D +L +G V L+ ++ K E+S+ +++L ++ G+ +
Sbjct: 532 LMNQPDNHWRILAAGIVPVLLDLV-KSEEISDGVTADSMAILAKMAEYP---DGMISVLR 587
Query: 477 MAEVLMRMERVGSEHVKEKAKR 498
+ + ++ +GS V K+
Sbjct: 588 RGGLKLAVKILGSSEVSPATKQ 609
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 131 (51.2 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 35 QKPQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFST 94
Q A P +F CP++ LM DPVVV++G T++R + G G ++
Sbjct: 267 QSLSDANIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTS 326
Query: 95 VIPNLALKSTILNWCHKQSL 114
++PN ALK+ I+ WC Q +
Sbjct: 327 LVPNRALKNLIVLWCRDQKI 346
Score = 93 (37.8 bits), Expect = 5.1e-10, Sum P(2) = 5.1e-10
Identities = 46/210 (21%), Positives = 91/210 (43%)
Query: 299 EKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAI-GVXXXXXXXX 357
+ + + I +G +P +V L Q +A I +L++ +QNKT I
Sbjct: 398 DTVARACIAEAGAIPKLVRYLATECPSLQINAVTTILNLSILEQNKTRIMETDGALNGVI 457
Query: 358 XXXKSDSE-RTQHDSALALYHLSLVKSNRTKLV-KLGSVNALLGMVNSGHMTGR--VLLI 413
+S + + ++A L+ L+ V + R +L K V+ L+ + G + + L+
Sbjct: 458 EVLRSGATWEAKANAAATLFSLAGVSAYRRRLGRKARVVSGLVDLAKQGPTSSKRDALVA 517
Query: 414 LGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAA 473
+ NL + + +++G ++G G E +E+ V + GGL ++A
Sbjct: 518 ILNLVAERENVGRFVEAG----VMGAA--GDAFQELPEEAVAVVEAVVRRGGLM--AVSA 569
Query: 474 AAGMAEVLMRMERVGSEHVKEKAKRMLELM 503
A + +L + R G++ +E A L M
Sbjct: 570 AFSLIRLLGEVMREGADTTRESAAATLVTM 599
>TAIR|locus:2116792 [details] [associations]
symbol:AT4G31890 "AT4G31890" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161579 EMBL:AL049607 HOGENOM:HOG000243144
ProtClustDB:CLSN2683147 EMBL:BT033029 EMBL:AK228494 IPI:IPI00537660
PIR:T06311 RefSeq:NP_001190883.1 RefSeq:NP_194917.1
UniGene:At.44088 ProteinModelPortal:Q9SZ56 SMR:Q9SZ56 PRIDE:Q9SZ56
EnsemblPlants:AT4G31890.1 EnsemblPlants:AT4G31890.2 GeneID:829319
KEGG:ath:AT4G31890 TAIR:At4g31890 eggNOG:NOG319234
InParanoid:Q9SZ56 OMA:ASRILEC PhylomeDB:Q9SZ56 ArrayExpress:Q9SZ56
Genevestigator:Q9SZ56 Uniprot:Q9SZ56
Length = 518
Score = 171 (65.3 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 55/211 (26%), Positives = 103/211 (48%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFS-LALD--DQNKTAIG----VXXXXX 354
NK IV++G V ++ ++ + + QE A + + L L D NK IG +
Sbjct: 220 NKAAIVKAGAVHKMLKLIESPNTPDQEIAEAVVANFLGLSALDSNKPIIGSSGAIIFLVK 279
Query: 355 XXXXXXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLIL 414
++ S + + D+ ALY+LS+ + N + +++ + LL + ++ R+L IL
Sbjct: 280 TLQNLDETSSSQAREDALRALYNLSIYQPNVSFILETDLITYLLNTLGDMEVSERILAIL 339
Query: 415 GNLASCSDGRVAV-LDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAA 473
NL + +GR A+ L LV +L T+ S QE +L ++H G + +
Sbjct: 340 SNLVAVPEGRKAIGLVCDAFPVLVDVLN-WTD-SPGCQEKATYILMLMAHKGYGDRQVMI 397
Query: 474 AAGMAEVLMRMERVGSEHVKEKAKRMLELMK 504
AG+ L+ + +GS +++A R+LE ++
Sbjct: 398 EAGIESALLELTLLGSALAQKRASRILECLR 428
>TAIR|locus:2099634 [details] [associations]
symbol:AT3G03440 "AT3G03440" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR000225 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 EMBL:CP002686
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
IPI:IPI00522077 RefSeq:NP_186994.2 UniGene:At.40980
ProteinModelPortal:F4J139 SMR:F4J139 EnsemblPlants:AT3G03440.1
GeneID:821253 KEGG:ath:AT3G03440 OMA:VRDERNK Uniprot:F4J139
Length = 408
Score = 162 (62.1 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 53/213 (24%), Positives = 100/213 (46%)
Query: 299 EKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXX 358
EK NK+ I+ +G + PI++ L + S QE+A ++ +L+ NK IG
Sbjct: 137 EK-NKVSIIEAGALEPIINFLQSNSPTLQEYASASLLTLSASANNKPIIGANGVVPLLVK 195
Query: 359 XXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVL-----LI 413
K S + + D+ +AL +LS + N + ++ ++ +L ++ S + + LI
Sbjct: 196 VIKHGSPQAKADAVMALSNLSTLPDNLSMILATKPLSPILNLLKSSKKSSKTSEKCCSLI 255
Query: 414 LGNLASCSDGRVAVL-DSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGL-RFKGL 471
+ S + R ++ D GGV +V +L G S +E V VL L +++
Sbjct: 256 EALMVSGEEARTGLVSDEGGVLAVVEVLENG---SLQAREHAVGVLLTLCQSDRSKYREP 312
Query: 472 AAAAGMAEVLMRMERVGSEHVKEKAKRMLELMK 504
G+ L+ + G+ + KA+R+L L++
Sbjct: 313 ILREGVIPGLLELTVQGTSKSRIKAQRLLCLLR 345
Score = 126 (49.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 50/197 (25%), Positives = 92/197 (46%)
Query: 309 SGLVPPIVDVLMAGSAEAQ-EHACGAIFSLAL-DDQNKTAIGVXXXXXXXXXXXKSDSER 366
S V P+V +L S E+ E A A+ +LA+ D++NK +I +S+S
Sbjct: 103 SQAVEPLVSMLRFDSPESHHEAALLALLNLAVKDEKNKVSIIEAGALEPIINFLQSNSPT 162
Query: 367 TQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRV--LLILGNLASCSDGR 424
Q ++ +L LS +N+ + G V L+ ++ G + ++ L NL++ D
Sbjct: 163 LQEYASASLLTLSASANNKPIIGANGVVPLLVKVIKHGSPQAKADAVMALSNLSTLPDNL 222
Query: 425 VAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFK-GLAAAAGMAEVLMR 483
+L + + ++ +L K ++ S T E C S++ AL G + GL + G ++
Sbjct: 223 SMILATKPLSPILNLL-KSSKKSSKTSEKCCSLIEALMVSGEEARTGLVSDEGGVLAVVE 281
Query: 484 MERVGSEHVKEKAKRML 500
+ GS +E A +L
Sbjct: 282 VLENGSLQAREHAVGVL 298
>TAIR|locus:2040214 [details] [associations]
symbol:AT2G25130 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0019894 "kinesin
binding" evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
PROSITE:PS50176 SMART:SM00185 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY144104 EMBL:AY649296 IPI:IPI00540631
PIR:F84644 RefSeq:NP_180085.1 UniGene:At.39061
ProteinModelPortal:Q8H1N2 SMR:Q8H1N2 PaxDb:Q8H1N2 PRIDE:Q8H1N2
EnsemblPlants:AT2G25130.1 GeneID:817051 KEGG:ath:AT2G25130
TAIR:At2g25130 eggNOG:NOG238592 HOGENOM:HOG000243144
InParanoid:Q8H1N2 OMA:GRERGHD PhylomeDB:Q8H1N2
ProtClustDB:CLSN2683147 Genevestigator:Q8H1N2 Uniprot:Q8H1N2
Length = 468
Score = 163 (62.4 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 55/212 (25%), Positives = 100/212 (47%)
Query: 301 INKMLIVRSGLVPPIVDVLMAGSA--EAQEHACGAIF-SLALDDQNKTAIGVXXXXXXXX 357
+NK IV++G+V ++ ++ + +A A A F L+ D NK IG
Sbjct: 186 VNKAAIVKAGVVHKMLKLVESSKPPNQAIAEAIVANFLGLSALDSNKPIIGSSGAIIFLV 245
Query: 358 XXXKS----DSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLI 413
K+ S + + D+ ALY+LS+ N + +++ + LL + ++ R+L I
Sbjct: 246 KTLKNFEETSSSQAREDALRALYNLSIYHQNVSFILETDLIPFLLNTLGDMEVSERILAI 305
Query: 414 LGNLASCSDGRVAVLDS-GGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLA 472
L N+ S +GR A+ + LV +L + QE V +L ++H G +
Sbjct: 306 LTNVVSVPEGRKAIGEVVEAFPILVDVLNWNDSIK--CQEKAVYILMLMAHKGYGDRNAM 363
Query: 473 AAAGMAEVLMRMERVGSEHVKEKAKRMLELMK 504
AG+ L+ + VGS +++A R+LE ++
Sbjct: 364 IEAGIESSLLELTLVGSPLAQKRASRVLECLR 395
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 115 (45.5 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 44/167 (26%), Positives = 77/167 (46%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
N+ +V++G V P++ +L + QE+A I +L+ K+ I +
Sbjct: 422 NRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKIAGEGLKILVEILNE 481
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLV--KLGSVNALLGMVNS---GHMTGR-VLLILG 415
T+ SA AL++LS V+ + ++L+ ++ L+ +V G R LL +
Sbjct: 482 GAKTETRLYSASALFYLSSVE-DYSRLIGENPDAIPGLMNIVKGDDYGDSAKRSALLAVM 540
Query: 416 NLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALS 462
L SD VL +G V L+ +LR G E+S C++ L L+
Sbjct: 541 GLLMQSDNHWRVLAAGAVPILLDLLRSG-EISGGLTADCLATLAKLA 586
Score = 114 (45.2 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 42/172 (24%), Positives = 78/172 (45%)
Query: 303 KMLIVRSGLVPPIVDVLMAGS-AEAQEHACGAIFSLALDDQNKTAIGVXXXXX-XXXXXX 360
K I GL +V++L G+ E + ++ A+F L+ + IG
Sbjct: 464 KSKIAGEGL-KILVEILNEGAKTETRLYSASALFYLSSVEDYSRLIGENPDAIPGLMNIV 522
Query: 361 KSDS--ERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRV----LLIL 414
K D + + + LA+ L + N +++ G+V LL ++ SG ++G + L L
Sbjct: 523 KGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATL 582
Query: 415 GNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALS-HGG 465
LA DG + V+ GG++ V +L + + ++ CV ++ L +GG
Sbjct: 583 AKLAEYPDGTIGVIRRGGLKLAVKILSSSEDSPVAVKQHCVGLILNLCLNGG 634
Score = 97 (39.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 33/129 (25%), Positives = 59/129 (45%)
Query: 30 KAHQLQKPQTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTT 89
K H L + E + LCP+S +M DPVV+ +GHT++R+ G + G
Sbjct: 279 KDHDLIRGLKVE---DLLCPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKI 335
Query: 90 PDFSTVIPNLALKSTILNWCHKQSLNPPK-PLEFSSAEKLVRASMESSQSKGKAMA-VSE 147
+ ++ N++++ I C + S + +V S+ +++ GK +A
Sbjct: 336 LTSTELVDNVSVRQVIRKHCKTNGIVLAGISRRRKSHDDVVPESL-AAKGAGKLIAKFLT 394
Query: 148 KELIRGVKE 156
ELI G +E
Sbjct: 395 SELINGGEE 403
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 113 (44.8 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 32/113 (28%), Positives = 54/113 (47%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFT--PTLVDGTTPDFSTVIPNLA 100
P F+CP+S M DPV + +G T+ER H LG PT + D TV PN
Sbjct: 65 PSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWDD--TVTPNKT 122
Query: 101 LKSTILNWCHKQSLNPPKPLEFSSAEKL-VRASMESSQSKGKAMAVSE-KELI 151
L I W ++ + K E + + +++ ++ + + A+SE K+++
Sbjct: 123 LHHLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLKKAKGQARVHALSELKQIV 175
Score = 94 (38.1 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 51/208 (24%), Positives = 95/208 (45%)
Query: 308 RSGLVPP-----IVDVLMAGSAEAQEHACGAIFSLALDDQNKTA--IGVXXXXXXXXXXX 360
+SGL+ P IVD+L GS E + + C + ++++ A +
Sbjct: 224 KSGLMQPAKVSLIVDMLNDGSNETKIN-CARLIRGLVEEKGFRAELVSSHSLLVGLMRLV 282
Query: 361 KSDSERTQHDSALALYH-LSLVKSNRTKLVKLGSVNALLGMVNS--GHMTGRVLLILGNL 417
K R AL L +S+ K R+ +V +G+V L+ ++ S L +L L
Sbjct: 283 KDKRHRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLELALFVLDAL 342
Query: 418 ASCSDGRVAVLDSGG-VECLVGMLRKGTELSESTQESCVSVLYALSH-GGLRFKGLAAAA 475
+ +GRVAV DS + V +L + +SE+ +S+L+++ LA
Sbjct: 343 CTDVEGRVAVKDSANTIPYTVRVLMR---VSENCTNYALSILWSVCKLAPEECSPLAVEV 399
Query: 476 GMAEVLMRMERVGSEH-VKEKAKRMLEL 502
G+A L+ + + G + +K+++ +L+L
Sbjct: 400 GLAAKLLLVIQSGCDAALKQRSAELLKL 427
Score = 69 (29.3 bits), Expect = 4.4e-06, Sum P(2) = 4.4e-06
Identities = 29/112 (25%), Positives = 51/112 (45%)
Query: 394 VNALLGMVNSGHMTGRVLLILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQES 453
+++LLG S + V+ IL +L SD + ++ V +V ML G S T+ +
Sbjct: 194 ISSLLGPFTSHAVGSEVVAILVSLDLDSDSKSGLMQPAKVSLIVDMLNDG---SNETKIN 250
Query: 454 CVSVLYAL-SHGGLRFKGLAAAAGMAEVLMRMERVGSEHVKEKAKRMLELMK 504
C ++ L G R + L ++ + LMR+ + H + L L+K
Sbjct: 251 CARLIRGLVEEKGFRAE-LVSSHSLLVGLMRLVK-DKRH-RNGVSPALRLLK 299
Score = 57 (25.1 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 14/45 (31%), Positives = 24/45 (53%)
Query: 303 KMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAI 347
+ L+V G VP +VD+L + E E A + +L D + + A+
Sbjct: 308 RSLMVSIGAVPQLVDILPSLDPECLELALFVLDALCTDVEGRVAV 352
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 105 (42.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 32/115 (27%), Positives = 53/115 (46%)
Query: 41 EPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFT--PTLVDGTTPDFSTVIPN 98
E P F+CP+S M DPV + +G T+ER+ +G PT + D T PN
Sbjct: 59 EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVT--PN 116
Query: 99 LALKSTILNWCHKQSLNPPKPLEFSSAEKL-VRASMESSQSKGKAMAVSE-KELI 151
L I W ++ + K E + + ++ ++ K K A+SE K+++
Sbjct: 117 KTLHQLIYTWFSQKYVLMKKRSEDVQGRAIEILGTLRKAKGKAKVHALSELKQVV 171
Score = 100 (40.3 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 48/207 (23%), Positives = 94/207 (45%)
Query: 308 RSGLVPP-----IVDVLMAGSAEAQEHACGAIFSLALDDQNKTA--IGVXXXXXXXXXXX 360
++GL+ P +VD+L GS E + + C + ++++ A +
Sbjct: 220 KAGLMQPARVSLMVDMLNDGSIETKIN-CARLIGRLVEEKGFRAELVSSHSLLVGLMRLV 278
Query: 361 KSDSERTQHDSALALYH-LSLVKSNRTKLVKLGSVNALLGMVN--SGHMTGRVLLILGNL 417
K R AL L +S+ K R LV++G+V L+ ++ L +L +L
Sbjct: 279 KDRRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFVLDSL 338
Query: 418 ASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSH-GGLRFKGLAAAAG 476
S+GR+A+ DS V + +R ++SE +S+L+++ LA G
Sbjct: 339 CLESEGRIALKDS--VNTIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAVEVG 396
Query: 477 MAEVLMRMERVGSEH-VKEKAKRMLEL 502
+A L+ + + G + +K+++ +L+L
Sbjct: 397 LAAKLLLVIQSGCDPALKQRSAELLKL 423
Score = 74 (31.1 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 28/103 (27%), Positives = 44/103 (42%)
Query: 305 LIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAI--GVXXXXXXXXXXXKS 362
L+VR G VP +VDVL E E A + SL L+ + + A+ V K
Sbjct: 306 LLVRIGAVPQLVDVLPCLDVECLESALFVLDSLCLESEGRIALKDSVNTIPHTVRLLMKV 365
Query: 363 DSERTQHDSALALYHLSLVKSNRTKL-VKLGSVNALLGMVNSG 404
+ T + ++ L + L V++G LL ++ SG
Sbjct: 366 SEKCTNYAISILWSVCKLASEECSSLAVEVGLAAKLLLVIQSG 408
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 102 (41.0 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 39/163 (23%), Positives = 69/163 (42%)
Query: 299 EKINKMLIVRSGLVPPIVDVLMA-GSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXX 357
EK NK L+ + LV P++ M G+ + H+ + SL+ D NK IG
Sbjct: 230 EK-NKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNSLSYTDSNKIIIGNSEVLKALI 288
Query: 358 XXXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLILGNL 417
+ ++ AL +L VK K V G + A + + +G +L +L +
Sbjct: 289 HVIEEGDSLATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKIKAGSNVSMLLSLLAFV 348
Query: 418 ASCSDGRVAVLDSGG-VECLVGMLRKGTELSESTQESCVSVLY 459
++ + +D+ G + L +LR L E+ V ++Y
Sbjct: 349 STQNHQTTEEMDNLGLIYDLFSILRNSNSLVND--ENAVVIVY 389
Score = 100 (40.3 bits), Expect = 4.6e-08, Sum P(2) = 4.6e-08
Identities = 23/79 (29%), Positives = 41/79 (51%)
Query: 41 EPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFST-VIPNL 99
E P EF+C +S +M +P++++SG TFE++ ++ + L T + +IPN
Sbjct: 64 EVPKEFICTLSNKIMIEPMLIASGQTFEKS--YILEWLKHERTCPRTKQVLYHRFMIPNH 121
Query: 100 ALKSTILNWCHKQSLNPPK 118
+ I WC + + PK
Sbjct: 122 LINEVIKEWCLIHNFDRPK 140
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 119 (46.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 28/69 (40%), Positives = 36/69 (52%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTP--DFSTVIPNLA 100
P F CP+S LM DPV V +G T++RA ++G T P DF T+IPN
Sbjct: 15 PYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTRAPLSDF-TLIPNHT 73
Query: 101 LKSTILNWC 109
L+ I WC
Sbjct: 74 LRRLIQEWC 82
Score = 75 (31.5 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 35/135 (25%), Positives = 62/135 (45%)
Query: 375 LYHLSLVKSNRTKLVKLGSVNALLGMVNSGHM---TGRVLLILGNLASCSDGRVAVLDSG 431
L+ L VKS R + G+ L+ + + T R L + L +G A G
Sbjct: 266 LFALCSVKSTRHIAITAGAPEILIDRLAADFDRCDTERALATVELLCRTPEGCAAF---G 322
Query: 432 GVECLVGMLRKGT-ELSESTQESCVSVLYALSHGGLRFKGLAAAAGMA-EVLMRMERVGS 489
V +L K +S+ E L AL R++ AA AG+ ++L+ ++ +
Sbjct: 323 EHALTVPLLVKTILRVSDRATEYAAGALLALCTAEERWREEAAGAGVVVQLLLMVQSECT 382
Query: 490 EHVKEKAKRMLELMK 504
E K+KA+++L+L++
Sbjct: 383 ERAKKKAQKLLKLLR 397
Score = 47 (21.6 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 312 VPPIVDVLMAGSAEAQEHACGAIFSLALDDQ 342
VP +V ++ S A E+A GA+ +L ++
Sbjct: 328 VPLLVKTILRVSDRATEYAAGALLALCTAEE 358
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 118 (46.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 27/68 (39%), Positives = 36/68 (52%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTT-PDFSTVIPNLAL 101
P F CP+S LM+DPV +S+G T++R +G T V DF T+IPN L
Sbjct: 15 PYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRVALSDF-TLIPNHTL 73
Query: 102 KSTILNWC 109
+ I WC
Sbjct: 74 RRLIQEWC 81
Score = 75 (31.5 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 34/135 (25%), Positives = 61/135 (45%)
Query: 374 ALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHM---TGRVLLILGNLASCSDGRVAVLDS 430
A++ L LVK R + G+ L+ + + T R L + L +G A +
Sbjct: 267 AIFALCLVKQTRHLAISAGAPGILIDRLAADFDRCDTERGLATVELLCRLPEGCAAFGEH 326
Query: 431 GGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAAGMA-EVLMRMERVGS 489
L M++ +S+ E L AL R + AAAAG+ ++L+ ++ +
Sbjct: 327 ALTVPL--MVKTILRVSDRATEYAAGALLALCTAEERCRDEAAAAGLVTQLLLLVQSDCT 384
Query: 490 EHVKEKAKRMLELMK 504
E K KA+ +L+L++
Sbjct: 385 ERAKRKAQMLLKLLR 399
Score = 46 (21.3 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 312 VPPIVDVLMAGSAEAQEHACGAIFSLALDDQ 342
VP +V ++ S A E+A GA+ +L ++
Sbjct: 330 VPLMVKTILRVSDRATEYAAGALLALCTAEE 360
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 111 (44.1 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 24/67 (35%), Positives = 32/67 (47%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVIPNLALK 102
P EF CP+S LM DPV++S+G T++R G V T IPN ++
Sbjct: 32 PPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNHTIR 91
Query: 103 STILNWC 109
I WC
Sbjct: 92 KMIQGWC 98
Score = 81 (33.6 bits), Expect = 4.0e-07, Sum P(2) = 4.0e-07
Identities = 37/160 (23%), Positives = 72/160 (45%)
Query: 362 SDSERTQHDSALALYHLSLVKSN-RTKLVKLGSVNALLGMVNSGH--MTGRVLLILGNLA 418
S S + S +A+Y + L K ++ +++G V+ + M+ + + L +L +
Sbjct: 267 SVSSSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEKALAVLDAIC 326
Query: 419 SCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGG--LRFKGLAAAAG 476
GR V + V L +++K ++SE S +S++ L G + +
Sbjct: 327 ETEHGREEVRKNALVMPL--LVKKIAKVSELATRSSMSMILKLWKTGNTVAVEDAVRLGA 384
Query: 477 MAEVLMRMERVG-SEHVKEKAKRMLELMKGRAXXXXXGVD 515
+VL+ ++ VG E KEKA +L++M + VD
Sbjct: 385 FQKVLLVLQ-VGYGEETKEKATELLKMMNTQMKLMSDCVD 423
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 115 (45.5 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 38/114 (33%), Positives = 54/114 (47%)
Query: 41 EPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLG---FTP-TLVDGTTPDFSTVI 96
E P FLCP+S +M DPV+VS+G T++R G P T D T D +
Sbjct: 11 EIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTKQDITDADLT--- 67
Query: 97 PNLALKSTILNWCHKQSL-------NPPKPLEFSSAEKLVRASMESSQSKGKAM 143
PN L+ I +WC + P P+ S EKL+R S S +++ K +
Sbjct: 68 PNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQVKCL 121
Score = 73 (30.8 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 29/129 (22%), Positives = 59/129 (45%)
Query: 384 NRTKLVKLGSVNALLGMVNSGHMTGR------VLLILGNLASCSDGRVAVLDSGGVECLV 437
NR K V+ G ++ ++ ++ T +++L L C++GR L+ G +V
Sbjct: 265 NRHKAVEAGVISVIIELLMDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVV 324
Query: 438 GMLRKGTELSESTQESCVSVLYALSH----GGLRFKGLAAAAGMAEVLMRMERVGSEHVK 493
+K +S++ + V VL ++ L + L +A++ + ++ K
Sbjct: 325 --CKKILRVSQTASDRAVRVLLSVGRFCATPALLHEMLQLGV-VAKLCLVLQVSCGGKTK 381
Query: 494 EKAKRMLEL 502
EKAK +L+L
Sbjct: 382 EKAKELLKL 390
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 112 (44.5 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 35/114 (30%), Positives = 54/114 (47%)
Query: 38 QTAEPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTL-VDGTTPDFSTVI 96
Q E P FLCP+S +M DPV+VS+G T++R G + V + +
Sbjct: 3 QEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETDLT 62
Query: 97 PNLALKSTILNWCHKQS------LNPPKP-LEFSSAEKLVRASMESSQSKGKAM 143
PN L+ I +WC + + PKP + S EKL++ S S ++ K +
Sbjct: 63 PNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSSSHLNQVKCL 116
Score = 76 (31.8 bits), Expect = 1.0e-06, Sum P(2) = 1.0e-06
Identities = 28/128 (21%), Positives = 59/128 (46%)
Query: 384 NRTKLVKLGSVNALLGMVNSGHMTGR------VLLILGNLASCSDGRVAVLDSGGVECLV 437
NR K V+ G+++ ++ ++ + +++L L C++GR L+ G +V
Sbjct: 289 NRHKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVV 348
Query: 438 GMLRKGTELSESTQESCVSVLYALSHGGLR---FKGLAAAAGMAEVLMRMERVGSEHVKE 494
+K +S+ T E V VL ++ + + +A++ + ++ KE
Sbjct: 349 S--KKILRVSQITSERAVRVLLSVGRFCATPSLLQEMLQLGVVAKLCLVLQVSCGNKTKE 406
Query: 495 KAKRMLEL 502
KAK +L+L
Sbjct: 407 KAKELLKL 414
>TAIR|locus:2135788 [details] [associations]
symbol:AT4G12710 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049640 EMBL:AL161534 HOGENOM:HOG000237435
EMBL:BT026433 EMBL:AK228965 IPI:IPI00547137 PIR:T06629
RefSeq:NP_193007.1 UniGene:At.33450 ProteinModelPortal:Q9SU15
SMR:Q9SU15 EnsemblPlants:AT4G12710.1 GeneID:826883
KEGG:ath:AT4G12710 TAIR:At4g12710 eggNOG:NOG281035
InParanoid:Q9SU15 OMA:MVHRSME PhylomeDB:Q9SU15
ProtClustDB:CLSN2685767 Genevestigator:Q9SU15 Uniprot:Q9SU15
Length = 402
Score = 139 (54.0 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 38/158 (24%), Positives = 82/158 (51%)
Query: 309 SGLVPPIVDVLMAGSAEAQEHACGAIFSLAL-DDQNKTAIGVXXXXXXXXXXXKSDSERT 367
+G++PP+V +L + + +A+ + A+ +LA+ +++NK I K +
Sbjct: 89 AGVIPPLVPMLFSSNVDARHASLLALLNLAVRNERNKIEIVKAGAVPPLIQILKLHNASL 148
Query: 368 QHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRV--LLILGNLASCSDGRV 425
+ + A+ LS +N+ ++ G L+ M++SG + G+V + L NL++C +
Sbjct: 149 RELATAAILTLSAAPANKAMIISSGVPPLLIQMLSSGTVQGKVDAVTALHNLSACKEYSA 208
Query: 426 AVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSH 463
+LD+ V L+ +L++ + S+ +++ V LSH
Sbjct: 209 PILDAKAVYPLIHLLKECKKHSKFAEKATALVEMILSH 246
Score = 129 (50.5 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 51/210 (24%), Positives = 94/210 (44%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
NK+ IV++G VPP++ +L +A +E A AI +L+ NK I
Sbjct: 124 NKIEIVKAGAVPPLIQILKLHNASLRELATAAILTLSAAPANKAMIISSGVPPLLIQMLS 183
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMV-----NSGHMTGRVLLILGN 416
S + + + D+ AL++LS K ++ +V L+ ++ +S L+
Sbjct: 184 SGTVQGKVDAVTALHNLSACKEYSAPILDAKAVYPLIHLLKECKKHSKFAEKATALVEMI 243
Query: 417 LASCSDGRVAVLD-SGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGL-RFKGLAAA 474
L+ DGR A+ G+ LV + G+ LS E V L +L +++ L
Sbjct: 244 LSHSEDGRNAITSCEDGILTLVETVEDGSPLSI---EHAVGALLSLCRSDRDKYRKLILK 300
Query: 475 AGMAEVLMRMERVGSEHVKEKAKRMLELMK 504
G L+ G+ +++A+ +L+L++
Sbjct: 301 EGAIPGLLSSTVDGTSKSRDRARVLLDLLR 330
>TAIR|locus:2038598 [details] [associations]
symbol:AT2G27430 "AT2G27430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AY169003 EMBL:AY954802 IPI:IPI00540469
RefSeq:NP_180312.2 UniGene:At.38764 ProteinModelPortal:Q8GUS7
SMR:Q8GUS7 PRIDE:Q8GUS7 EnsemblPlants:AT2G27430.1 GeneID:817288
KEGG:ath:AT2G27430 TAIR:At2g27430 eggNOG:NOG235856
HOGENOM:HOG000241608 InParanoid:Q8GUS7 OMA:KNMEMIT PhylomeDB:Q8GUS7
ProtClustDB:CLSN2690947 Genevestigator:Q8GUS7 Uniprot:Q8GUS7
Length = 438
Score = 138 (53.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 72/307 (23%), Positives = 126/307 (41%)
Query: 215 LEPQTLNHPNSNEQEDYFVQKLKSPQVH-----EVEEALISLRKLTRSREETRVSLCTPX 269
L + ++ P +E E+ +QK ++H E E+A I + KL R ++TR +
Sbjct: 61 LPEEIVSKPPEDENEEVVLQKTVK-KIHFGSWEEKEKAAIEIEKLAREDKKTRKLMAELG 119
Query: 270 XXXXXXXXXXXXYTXXXXXXXXXXXXXXXEKI-NKMLIVRSGL---VPPIVDVLMAGSAE 325
+ NK L+V + + +P V+VL +
Sbjct: 120 VIQILVSMVASDVSGHQKAAVNALIQLSHGTYTNKALMVNADICSKLPKNVEVL----DQ 175
Query: 326 AQEHACGAIFSLALDDQNKTAIGVXXXXXX--XXXXXKSDSE--RTQHDSALALYHLSLV 381
+ HA + L+L T + V SDS +T+ + +L LV
Sbjct: 176 STRHAFAELL-LSLSSLTNTQLPVASSQILPFLMDTMNSDSTDMKTKEICLATISNLCLV 234
Query: 382 KSNRTKLVKLGSVNALLGMVNSGHMTGRVLLILGNLASCSDGRVAVLDSGGVECLV---G 438
N LV G+V LL ++++ ++ + L LG L G+ A+ D CL+ G
Sbjct: 235 LENAGPLVLNGAVETLLSLMSTKDLSEKALASLGKLVVTQMGKKAMED-----CLLVSKG 289
Query: 439 MLRKGT-ELSESTQESCVSVLYALSHGGLRFKGLAAAAGMAEVLMRMERVGSEHVKEKAK 497
++ T E QE +L L+H + A AG+ VL+ + +GS V+++A
Sbjct: 290 LIEILTWEDIPKCQEYAAYILMVLAHQSWSQREKMAKAGIVPVLLEVSLLGSPLVQKRAV 349
Query: 498 RMLELMK 504
++L+ K
Sbjct: 350 KLLQWFK 356
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 110 (43.8 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 31/121 (25%), Positives = 53/121 (43%)
Query: 39 TAEPPGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVI-P 97
+ E P EF C +S ++M DPV++ SG T+E+ ++ + L T + + P
Sbjct: 71 SVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKR--YITEWLNHDLTCPTAKQVLYRVCLTP 128
Query: 98 NLALKSTILNWC--HKQSLNPPKPLEFSSAEKLVRASMESSQSKGKAMAVSEKELIRGVK 155
N + I WC +K PKP + +L +ES + + + S + K
Sbjct: 129 NHLINELITRWCLANKYDRPAPKPSDIDYVTELFTDGIESLLQRISSPSSSVADQTEAAK 188
Query: 156 E 156
E
Sbjct: 189 E 189
Score = 73 (30.8 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 48/208 (23%), Positives = 80/208 (38%)
Query: 299 EKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIG--VXXXXXXX 356
EK +L ++P + + GS + +A + SL+ D NK IG V
Sbjct: 247 EKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDSNKIIIGNSVALKALID 306
Query: 357 XXXXKSDSERTQHDSALALYHLSL-VKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLILG 415
D T HD+ A+ L + N K + LG A + + + L L
Sbjct: 307 LIGELDDLSAT-HDALCAVIDLCCDERENWKKAISLGLAPAAIKNIKARRNLFESLAALA 365
Query: 416 NLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSV--LYALSHGGLRFKGLAA 473
++ V + G + L+ +LRK T + + + V V +YA S K LA
Sbjct: 366 LISPHERVIQEVANLGVIYDLLSILRK-TSCMVTCENAVVIVGNMYAKSRERSIKKILAE 424
Query: 474 AAGMAEVLMRMERVGSEHVKEKAKRMLE 501
+ ++ GS KA+ +L+
Sbjct: 425 EENQHKTFTKIATQGSVVAVMKAQGILQ 452
Score = 68 (29.0 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 28/106 (26%), Positives = 52/106 (49%)
Query: 325 EAQEHACGAIFSLALDDQNKTAIGVXXXXX-XXXXXXKSDSERTQHDSALALYHLSLVKS 383
E QE+ A+F+++ ++NKT + K S T+ ++ L L LS + S
Sbjct: 231 ELQENIVTALFNMSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNATLTLASLSDIDS 290
Query: 384 NRTKLVKLGSVNALLGMVNSGHMTGRVLLILGNLASCSDGRVAVLD 429
N K++ +G+ AL +++ + G L +L++ D AV+D
Sbjct: 291 N--KII-IGNSVALKALID---LIGE----LDDLSATHDALCAVID 326
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 119 (46.9 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 51/201 (25%), Positives = 95/201 (47%)
Query: 315 IVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXKS-DSERTQHDSAL 373
IV + G+ E + G + +A+D ++K I S DS+ + +S+L
Sbjct: 201 IVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERDGLITELMKSISKDSDLSLIESSL 260
Query: 374 A-LYHLSLVKSNRTKLVK---LGSVNALLGMVNSG---HMTGRVLLILGNLASCSDGRVA 426
+ L +S K + L++ +G V LL S +T + L +L LAS +GR
Sbjct: 261 SCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSLSVSVTEKCLKLLEILASTKEGRSE 320
Query: 427 VLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRFKGLAAAA---GMAEVLMR 483
+ G ECL +++K ++S + E V+VL+++S+ K L A G+ ++L+
Sbjct: 321 ICGGDG-ECLKTVVKKLMKVSTAATEHAVTVLWSVSYLFKEDKALEAVTSVNGVTKILLL 379
Query: 484 MERVGSEHVKEKAKRMLELMK 504
++ S V+ +L++ K
Sbjct: 380 LQSNCSPAVRRMLTDLLKVFK 400
Score = 62 (26.9 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERA 70
P F CP+S +M PV + +G T++RA
Sbjct: 11 PTFFRCPISLDVMKSPVSLCTGVTYDRA 38
>TAIR|locus:2198235 [details] [associations]
symbol:AT1G01830 "AT1G01830" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000225 InterPro:IPR016024 Pfam:PF00514 PROSITE:PS50176
SMART:SM00185 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:NOG268795 HOGENOM:HOG000239669 ProtClustDB:CLSN2683369
EMBL:AY059739 EMBL:AY091273 IPI:IPI00535901 RefSeq:NP_001077443.1
RefSeq:NP_001077444.1 RefSeq:NP_563637.1 UniGene:At.26641
ProteinModelPortal:Q93YW3 SMR:Q93YW3 EnsemblPlants:AT1G01830.1
EnsemblPlants:AT1G01830.2 EnsemblPlants:AT1G01830.3 GeneID:839264
KEGG:ath:AT1G01830 TAIR:At1g01830 InParanoid:Q93YW3 OMA:GHLESKH
PhylomeDB:Q93YW3 ArrayExpress:Q93YW3 Genevestigator:Q93YW3
Uniprot:Q93YW3
Length = 574
Score = 139 (54.0 bits), Expect = 4.5e-06, P = 4.5e-06
Identities = 40/139 (28%), Positives = 68/139 (48%)
Query: 306 IVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXKSDSE 365
++ G++PP+V ++ +GS E +E A AI L++ ++N I K+
Sbjct: 247 LISEGVLPPLVRLIESGSLETKEKAAIAIQRLSMTEENAREIAGHGGITPLIDLCKTGDS 306
Query: 366 RTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTG---RVLLILGNLASCSD 422
+Q SA AL ++S V R L + G + + ++N G + G + L NL + SD
Sbjct: 307 VSQAASAAALKNMSAVSELRQLLAEEGIIRVSIDLLNHGILLGSREHMAECLQNLTAASD 366
Query: 423 G-RVAVLDSGGVECLVGML 440
R A++ GGV L+ L
Sbjct: 367 ALREAIVSEGGVPSLLAYL 385
>SGD|S000000739 [details] [associations]
symbol:VAC8 "Phosphorylated and palmitoylated vacuolar
membrane protein" species:4932 "Saccharomyces cerevisiae"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP;IPI] [GO:0071562
"nucleus-vacuole junction assembly" evidence=IMP] [GO:0071561
"nucleus-vacuole junction" evidence=IDA;IPI] [GO:0000011 "vacuole
inheritance" evidence=IEA;IMP] [GO:0071255 "CVT vesicle assembly"
evidence=IMP] [GO:0016236 "macroautophagy" evidence=IMP]
[GO:0034727 "piecemeal microautophagy of nucleus" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IDA]
[GO:0071563 "Myo2p-Vac17p-Vac8p transport complex"
evidence=IDA;IPI] [GO:0005774 "vacuolar membrane" evidence=IEA]
[GO:0005773 "vacuole" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SGD:S000000739 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
eggNOG:COG5064 GO:GO:0000329 EMBL:BK006939 GO:GO:0043495
GO:GO:0000011 GO:GO:0016236 GeneTree:ENSGT00680000099702
EMBL:U18530 GO:GO:0042144 RefSeq:NP_010907.3 GeneID:856709
KEGG:sce:YEL009C KO:K09464 RefSeq:NP_010903.3 GeneID:856702
KEGG:sce:YEL013W KO:K08332 PANTHER:PTHR23315:SF8
HOGENOM:HOG000177331 OMA:EEIQCHA OrthoDB:EOG4QZBV8 GO:GO:0071255
EMBL:AF005267 PIR:S50446 ProteinModelPortal:P39968 SMR:P39968
DIP:DIP-5121N IntAct:P39968 MINT:MINT-517641 STRING:P39968
PaxDb:P39968 PeptideAtlas:P39968 EnsemblFungi:YEL013W
NextBio:982766 Genevestigator:P39968 GermOnline:YEL013W
GO:GO:0071563 GO:GO:0071561 GO:GO:0071562 Uniprot:P39968
Length = 578
Score = 137 (53.3 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 33/102 (32%), Positives = 54/102 (52%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
NK+LIV G + P+++ +M + E Q +A G I +LA D NK I K
Sbjct: 118 NKLLIVEMGGLEPLINQMMGDNVEVQCNAVGCITNLATRDDNKHKIATSGALIPLTKLAK 177
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNS 403
S R Q ++ AL +++ + NR +LV G+V L+ +++S
Sbjct: 178 SKHIRVQRNATGALLNMTHSEENRKELVNAGAVPVLVSLLSS 219
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 99 (39.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 41/221 (18%), Positives = 101/221 (45%)
Query: 299 EKINKMLIVRSG--LVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAI----GVXXX 352
E+++ +++ G + I+ + G+ E++ + + ++ D ++K I GV
Sbjct: 176 ERLSNLMLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTE 235
Query: 353 XXXXXXXXKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTG---- 408
+S S L +S K R+KL+ ++ + ++ + +T
Sbjct: 236 MMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVAVT 295
Query: 409 -RVLLILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLR 467
+ L +L L+S +GR+ + C+ G+++K ++S + E V++L+ L +
Sbjct: 296 EKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVFRE 355
Query: 468 FKGLAAAA----GMAEVLMRMERVGSEHVKEKAKRMLELMK 504
K + G+ ++L+ ++ S V++ AK +++++K
Sbjct: 356 DKTVEETVERSNGVTKLLVVIQSNCSAMVRQMAKDLIKVLK 396
Score = 79 (32.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 39/129 (30%), Positives = 55/129 (42%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFT--P-TLVDGTTPDFSTVIPNL 99
P F CP+S +M PV + +G T++RA G P T+ T DF +PNL
Sbjct: 13 PSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDF---VPNL 69
Query: 100 ALKSTILNWC------HKQS---LNPPKPLEFSSAEKLVRASMESSQSKGKAMAVSEKEL 150
L+ I W H LNPP E + E+ V +E S M ++
Sbjct: 70 TLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEE-VNVLLERLMSLENLM-----KI 123
Query: 151 IRGVKEKPS 159
+R VK+ S
Sbjct: 124 VRFVKDSDS 132
>ASPGD|ASPL0000008980 [details] [associations]
symbol:AN12408 species:162425 "Emericella nidulans"
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0000011 "vacuole inheritance"
evidence=IEA] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 Pfam:PF00514 PROSITE:PS50176 SMART:SM00185
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000329
EMBL:BN001301 GO:GO:0000011 GO:GO:0016236 GO:GO:0042144
PANTHER:PTHR23315:SF8 HOGENOM:HOG000177331 OMA:EEIQCHA
GO:GO:0071255 GO:GO:0071563 GO:GO:0071561 GO:GO:0071562
ProteinModelPortal:C8V2Y6 EnsemblFungi:CADANIAT00007711
Uniprot:C8V2Y6
Length = 579
Score = 133 (51.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 41/147 (27%), Positives = 73/147 (49%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
NK+LIV G + P++ +M+ + E Q +A G I +LA + NK I K
Sbjct: 139 NKVLIVALGGLAPLIKQMMSPNVEVQCNAVGCITNLATHEDNKAKIARSGALGPLIRLAK 198
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLI--LGNLA- 418
S R Q ++ AL +++ NR +LV G++ L+ +++S + + L N+A
Sbjct: 199 SKDMRVQRNATGALLNMTHSDDNRQQLVNAGAIPVLVQLLSSSDVDVQYYCTTALSNIAV 258
Query: 419 -SCSDGRVAVLDSGGVECLVGMLRKGT 444
+ + R+A +S V+ LV ++ T
Sbjct: 259 DASNRKRLAQTESRLVQSLVHLMDSST 285
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 127 (49.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 34/90 (37%), Positives = 46/90 (51%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVIPNLALK 102
P +F C +S ++M DPV++SSG+TFER G + D T+ PN+ LK
Sbjct: 220 PEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVELK 279
Query: 103 STILNWCHKQSLNPPKPLEFSSAEKLVRAS 132
S I WC K L+ P A K V+AS
Sbjct: 280 SQISEWCAKNGLDVQDP-----ARKHVKAS 304
Score = 52 (23.4 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 19/82 (23%), Positives = 41/82 (50%)
Query: 363 DSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSG--HMTGRVLLILGNLASC 420
+SE ++ L LS +K+ GS+++LL +V S H+ + ++ L NL+S
Sbjct: 474 ESEVVAEEALNILEVLSNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQAMITLKNLSSS 533
Query: 421 SDGRVAVLDSGGVECLVGMLRK 442
+ + ++ ++ L L++
Sbjct: 534 MEICLEMVSLDFIQKLTSFLQQ 555
Score = 41 (19.5 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 9/24 (37%), Positives = 16/24 (66%)
Query: 236 LKSPQVHEVEEALISLRKLTRSRE 259
++S H E+A+I+L+ L+ S E
Sbjct: 512 VESQAEHLQEQAMITLKNLSSSME 535
>CGD|CAL0001835 [details] [associations]
symbol:VAC8 species:5476 "Candida albicans" [GO:0000011
"vacuole inheritance" evidence=ISS;IMP] [GO:0030448 "hyphal growth"
evidence=IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0071563
"Myo2p-Vac17p-Vac8p transport complex" evidence=IEA] [GO:0071561
"nucleus-vacuole junction" evidence=IEA] [GO:0043495 "protein
anchor" evidence=IEA] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:0071562 "nucleus-vacuole junction assembly" evidence=IEA]
[GO:0071255 "CVT vesicle assembly" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0016236
"macroautophagy" evidence=IEA] InterPro:IPR000225
InterPro:IPR016024 InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185
CGD:CAL0001835 GO:GO:0005774 GO:GO:0071216 GO:GO:0036180
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011
GO:GO:0000324 GO:GO:0030448 eggNOG:NOG265712 KO:K08332
EMBL:AACQ01000222 EMBL:AACQ01000221 RefSeq:XP_710979.1
RefSeq:XP_710992.1 ProteinModelPortal:Q59MN0 STRING:Q59MN0
GeneID:3647410 GeneID:3647417 KEGG:cal:CaO19.745
KEGG:cal:CaO19.8364 PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 130 (50.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
NK+LIV G + P++ +M+ + E Q +A G I +LA D NK+ I K
Sbjct: 120 NKILIVEMGGLEPLIRQMMSTNIEVQCNAVGCITNLATQDDNKSKIAKSGALIPLTKLAK 179
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNS 403
S R Q ++ AL +++ NR +LV G+V L+ ++++
Sbjct: 180 SKDIRVQRNATGALLNMTHSGENRQELVNAGAVPVLVSLLSN 221
>UNIPROTKB|Q59MN0 [details] [associations]
symbol:VAC8 "Vacuolar protein 8" species:237561 "Candida
albicans SC5314" [GO:0000011 "vacuole inheritance"
evidence=ISS;IMP] [GO:0000324 "fungal-type vacuole" evidence=ISS]
[GO:0030447 "filamentous growth" evidence=IMP] [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0036180 "filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] InterPro:IPR000225 InterPro:IPR016024
InterPro:IPR026958 PROSITE:PS50176 SMART:SM00185 CGD:CAL0001835
GO:GO:0005774 GO:GO:0071216 GO:GO:0036180 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0000011 GO:GO:0000324
GO:GO:0030448 eggNOG:NOG265712 KO:K08332 EMBL:AACQ01000222
EMBL:AACQ01000221 RefSeq:XP_710979.1 RefSeq:XP_710992.1
ProteinModelPortal:Q59MN0 STRING:Q59MN0 GeneID:3647410
GeneID:3647417 KEGG:cal:CaO19.745 KEGG:cal:CaO19.8364
PANTHER:PTHR23315:SF8 Uniprot:Q59MN0
Length = 585
Score = 130 (50.8 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 32/102 (31%), Positives = 54/102 (52%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXK 361
NK+LIV G + P++ +M+ + E Q +A G I +LA D NK+ I K
Sbjct: 120 NKILIVEMGGLEPLIRQMMSTNIEVQCNAVGCITNLATQDDNKSKIAKSGALIPLTKLAK 179
Query: 362 SDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNS 403
S R Q ++ AL +++ NR +LV G+V L+ ++++
Sbjct: 180 SKDIRVQRNATGALLNMTHSGENRQELVNAGAVPVLVSLLSN 221
>TAIR|locus:2157358 [details] [associations]
symbol:AT5G50900 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 SMART:SM00185 EMBL:CP002688 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AB017063 EMBL:BT020588
EMBL:BT033035 IPI:IPI00519624 RefSeq:NP_199903.1 UniGene:At.25502
ProteinModelPortal:Q9FI58 SMR:Q9FI58 PRIDE:Q9FI58
EnsemblPlants:AT5G50900.1 GeneID:835162 KEGG:ath:AT5G50900
TAIR:At5g50900 InParanoid:Q9FI58 OMA:NFVEENA PhylomeDB:Q9FI58
ProtClustDB:CLSN2687203 Genevestigator:Q9FI58 Uniprot:Q9FI58
Length = 555
Score = 129 (50.5 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 40/140 (28%), Positives = 71/140 (50%)
Query: 302 NKMLIVRSGL--VPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXX 359
+K +++ GL + ++ VL +GS A+E AC A+ +L+L +N AIG
Sbjct: 219 SKHVLIAEGLSLLNHLLRVLESGSGFAKEKACVALQALSLSKENARAIGCRGGISSLLEI 278
Query: 360 XKSDSERTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRVLLI--LGNL 417
+ S +Q +A L +L+L + V+ ++ L+ MV+SG + + L NL
Sbjct: 279 CQGGSPGSQAFAAGVLRNLALFGETKENFVEENAIFVLISMVSSGTSLAQENAVGCLANL 338
Query: 418 ASCS-DGRVAVLDSGGVECL 436
S D ++V+ GG++CL
Sbjct: 339 TSGDEDLMISVVREGGIQCL 358
>TAIR|locus:1005716696 [details] [associations]
symbol:AT1G08315 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000225
InterPro:IPR016024 Pfam:PF00514 SMART:SM00185 EMBL:CP002684
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
UniGene:At.42266 UniGene:At.48169 EMBL:AK229288 IPI:IPI00546916
RefSeq:NP_849613.1 ProteinModelPortal:Q0WNZ8 SMR:Q0WNZ8
PRIDE:Q0WNZ8 EnsemblPlants:AT1G08315.1 GeneID:837352
KEGG:ath:AT1G08315 TAIR:At1g08315 eggNOG:NOG245502
InParanoid:Q0WNZ8 OMA:VAQVAGC PhylomeDB:Q0WNZ8
ProtClustDB:CLSN2690788 Genevestigator:Q0WNZ8 Uniprot:Q0WNZ8
Length = 325
Score = 106 (42.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 41/153 (26%), Positives = 69/153 (45%)
Query: 363 DSE-RTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVNSGHMTGRV---LLILGNLA 418
DS R+ DS AL+ ++L NR+ ++ LG++ AL ++ G V ++ +A
Sbjct: 149 DSHPRSIKDSLKALFAIALYPMNRSTMISLGAIPALFSLIVKDSRCGIVEDATAVMAQVA 208
Query: 419 SCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSH-GGLRFKGLAAAA-- 475
C D + G L +L T S +E+ V L L+ GG + AAA
Sbjct: 209 GCEDSEDGMRRVSGANVLADLLDPCTGSSLRIKENSVGALLNLARCGGAAARSEVAAAVA 268
Query: 476 -----GMAEVLMRMERVGSEHVKEKAKRMLELM 503
G E ++ + GS ++KA +L+L+
Sbjct: 269 SGADEGAMEGIVYVAENGSLKGRKKAVDLLKLV 301
Score = 58 (25.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 9/38 (23%), Positives = 24/38 (63%)
Query: 302 NKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLAL 339
++++I +G +P + + L + S +QE+A + +L++
Sbjct: 41 SRLIIADAGAIPYLAETLYSSSHSSQENAAATLLNLSI 78
>TAIR|locus:2150295 [details] [associations]
symbol:ARIA "ARM repeat protein interacting with ABF2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515
"protein binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IEP;IMP]
[GO:0010187 "negative regulation of seed germination" evidence=IMP]
[GO:0000956 "nuclear-transcribed mRNA catabolic process"
evidence=RCA] InterPro:IPR000225 InterPro:IPR000210
InterPro:IPR013069 InterPro:IPR016024 Pfam:PF00514 Pfam:PF00651
PROSITE:PS50097 PROSITE:PS50176 SMART:SM00185 SMART:SM00225
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0009737 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009651 EMBL:AF296837
eggNOG:COG5064 HOGENOM:HOG000030229 GO:GO:0016567
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0010187
EMBL:AY058878 EMBL:AK317640 EMBL:AK220904 IPI:IPI00546696
RefSeq:NP_850852.1 UniGene:At.20128 ProteinModelPortal:B9DHT4
SMR:B9DHT4 STRING:B9DHT4 PaxDb:B9DHT4 PRIDE:B9DHT4
EnsemblPlants:AT5G19330.1 GeneID:832053 KEGG:ath:AT5G19330
TAIR:At5g19330 OMA:SEAFHAM PhylomeDB:B9DHT4 ArrayExpress:B9DHT4
Genevestigator:B9DHT4 Uniprot:B9DHT4
Length = 710
Score = 98 (39.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 25/95 (26%), Positives = 47/95 (49%)
Query: 303 KMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXKS 362
K+ IV+ G V P++++L + + +E + A+ LA D N+ I S
Sbjct: 317 KVHIVQRGAVRPLIEMLQSPDVQLKEMSAFALGRLAQDAHNQAGIAHSGGLGPLLKLLDS 376
Query: 363 DSERTQHDSALALYHLSLVKSNRTKLVKLGSVNAL 397
+ QH++A ALY L+ + N + +++G + L
Sbjct: 377 RNGSLQHNAAFALYGLADNEDNVSDFIRVGGIQKL 411
Score = 74 (31.1 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 409 RVLLILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALSHGGLRF 468
RV L L +L S D R +D G+E L+G+L G+ L+ Q + LY L++ +
Sbjct: 458 RVALALAHLCSPEDQRTIFIDDNGLELLLGLL--GS-LNTKQQLDGAAALYKLANKSMAL 514
Query: 469 KGLAAA 474
+ AA
Sbjct: 515 SPVDAA 520
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 96 (38.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 44/185 (23%), Positives = 85/185 (45%)
Query: 331 CGAIFS-LALDDQNKTAIGVXXXXXXXXXXX-KSDSERTQHDSALALYHLSLVKSNRTKL 388
C A+ +A+D ++K I SDS+ + ++ L+L +++ S R KL
Sbjct: 209 CSAVLEFIAVDAESKLIIAKGEGLVTEIIKLISSDSDSSLIEANLSLL-IAIASSKRVKL 267
Query: 389 VKLGS--VNALLGMVN----SGHMTGRVLLILGNLASCSDGRVAVLDSGGVECLVGMLRK 442
+ V L ++ S +T + L +L ++SC +GR + D VE +V L K
Sbjct: 268 ALIREKLVTKLTSLLTDPTTSVSVTEKCLKLLEAISSCKEGRSEICDGVCVETVVNKLMK 327
Query: 443 GTELSESTQESCVSVLYALSHGGLRFKGLAAAA---GMAEVLMRMERVGSEHVKEKAKRM 499
+S + E V+VL+++ + K A G+ ++L+ ++ S V+ +
Sbjct: 328 ---VSTAATEHAVTVLWSVCYLFKEKKAQDAVIRINGVTKILLLLQSNCSLTVRHMLTDL 384
Query: 500 LELMK 504
L++ K
Sbjct: 385 LKVFK 389
Score = 70 (29.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/114 (21%), Positives = 46/114 (40%)
Query: 43 PGEFLCPVSGSLMADPVVVSSGHTFERACAHVCKTLGFTPTLVDGTTPDFSTVIPNLALK 102
P F CP+S +M PV +S+G T++R G +PNL L
Sbjct: 12 PCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTLH 71
Query: 103 STILNWCHKQSLNPPKPLEFSSAEKLVRASMESSQSKGKAMAVSEKELIRGVKE 156
I +W S+N E ++ R + ++ + + + +++R +E
Sbjct: 72 RLIDHW--SDSINRRADSESPESDTPTRDEINAAIERFRIENDARSKILRFARE 123
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 120 (47.3 bits), Expect = 0.00036, P = 0.00036
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 41 EPPGEFLCPVSGSLMADPVVVSSGHTFE-RACAHVCKTLGFTPTLVDGTTPDFSTVIPNL 99
EPP F+CP++ +M DP V + G T+E A + + T +++ P S ++PNL
Sbjct: 352 EPPQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTS-LVPNL 410
Query: 100 ALKSTILNWCH-KQSLNPP 117
AL+S I W ++ LN P
Sbjct: 411 ALRSAIQEWLQLRELLNRP 429
>TAIR|locus:2145653 [details] [associations]
symbol:AT5G14510 species:3702 "Arabidopsis thaliana"
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0009832 "plant-type cell wall biogenesis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0010089 "xylem development" evidence=RCA] [GO:0010413
"glucuronoxylan metabolic process" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR016024
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AL163817 IPI:IPI00537670
PIR:T48624 RefSeq:NP_196955.1 UniGene:At.31922
ProteinModelPortal:Q9LY78 SMR:Q9LY78 PRIDE:Q9LY78
EnsemblPlants:AT5G14510.1 GeneID:831302 KEGG:ath:AT5G14510
TAIR:At5g14510 eggNOG:NOG303012 HOGENOM:HOG000237435
InParanoid:Q9LY78 OMA:CKEHAVG PhylomeDB:Q9LY78
ProtClustDB:CLSN2687225 Genevestigator:Q9LY78 Uniprot:Q9LY78
Length = 327
Score = 116 (45.9 bits), Expect = 0.00060, P = 0.00060
Identities = 61/287 (21%), Positives = 113/287 (39%)
Query: 229 EDYFVQKLKSPQVHEVEEALISLRKLTRSREETRVS--LCTPXXXXXXXXXXXXXYTXXX 286
E+ V+ L S EA I L L+R + + + +P T
Sbjct: 2 EEIVVESLLSGNRESQIEAAIELTNLSRKQRQKLAEREIISPLLSMLQSQDCI---TTEV 58
Query: 287 XXXXXXXXXXXXEKINKMLIVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTA 346
E+ NK+ IV+SG VP ++++L + + A F L L NK
Sbjct: 59 ALSALLSLAFGSER-NKVRIVKSGAVPTLLEILQSETKMVVLELAMA-FLLILSSCNKNK 116
Query: 347 IGVXXXXXXXXXXXKSDSER----TQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMVN 402
+ + +R + D L +LS + ++ G+ ALL ++N
Sbjct: 117 VKMASTRLVQLLVGLIGLDRLTIQAKVDGIATLQNLSTLHQIVPLVIASGAPYALLQVIN 176
Query: 403 ----SGHMTGRVLLILGNLASCSDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVL 458
S + + + +L N+ S S V+ + G + LV + +G S +E V +L
Sbjct: 177 FCDKSSELADKAVALLENIISHSPESVSSI-GGAIGVLVEAIEEG---SAQCKEHAVGIL 232
Query: 459 YALSHGGLRF-KGLAAAAGMAEVLMRMERVGSEHVKEKAKRMLELMK 504
+ + +G+ G+ L+++ G+ KE A+ +L L++
Sbjct: 233 LGICNNDRETNRGMILREGVMPGLLQVSVDGTRRAKEMARELLLLLR 279
>TAIR|locus:2103351 [details] [associations]
symbol:ARABIDILLO-2 "AT3G60350" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0048527 "lateral root development" evidence=IGI;IMP]
InterPro:IPR000225 InterPro:IPR001810 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 PROSITE:PS50181 SMART:SM00185
SMART:SM00256 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0048527
HSSP:Q02248 eggNOG:NOG48141 HOGENOM:HOG000029512
ProtClustDB:CLSN2685043 EMBL:AL138646 IPI:IPI00537320 PIR:T47846
RefSeq:NP_191594.1 UniGene:At.48788 UniGene:At.63623
ProteinModelPortal:Q9M224 SMR:Q9M224 PRIDE:Q9M224
EnsemblPlants:AT3G60350.1 GeneID:825206 KEGG:ath:AT3G60350
TAIR:At3g60350 InParanoid:Q9M224 OMA:RTTIDHI PhylomeDB:Q9M224
Genevestigator:Q9M224 Uniprot:Q9M224
Length = 928
Score = 122 (48.0 bits), Expect = 0.00061, P = 0.00061
Identities = 50/199 (25%), Positives = 90/199 (45%)
Query: 306 IVRSGLVPPIVDVLMAGSAEAQEHACGAIFSLALDDQNKTAIGVXXXXXXXXXXXKSDSE 365
++R G + ++++ + Q A AI +L+++ + A+ KS +
Sbjct: 425 VMRDGGIRLLLELAKSWREGLQSEAAKAIANLSVNAKVAKAVAEEGGISVLADLAKSMNR 484
Query: 366 RTQHDSALALYHLSLVKSNRTKLVKLGSVNALLGMV-NSGHMTGRVLL----ILGNLASC 420
++A L++LS+ + ++ + + G VNAL+ ++ H VL L NLA+
Sbjct: 485 LVAEEAAGGLWNLSVGEEHKNAIAQAGGVNALVDLIFRWPHGCDGVLERAAGALANLAAD 544
Query: 421 SDGRVAVLDSGGVECLVGMLRKGTELSESTQESCVSVLYALS-HGGLRFKGLAAA--AGM 477
+ V +GGV LV ML + + E QE L L+ HG A AG
Sbjct: 545 DKCSMEVARAGGVHALV-MLARNCKY-EGAQEQAARALANLAAHGDSNGNNAAVGQEAGA 602
Query: 478 AEVLMRMERVGSEHVKEKA 496
E L+++ + E VK++A
Sbjct: 603 LEALVQLTQSPHEGVKQEA 621
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.315 0.130 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 546 474 0.0010 118 3 11 22 0.42 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 57
No. of states in DFA: 614 (65 KB)
Total size of DFA: 259 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 35.75u 0.07s 35.82t Elapsed: 00:00:06
Total cpu time: 35.77u 0.07s 35.84t Elapsed: 00:00:06
Start: Mon May 20 18:53:22 2013 End: Mon May 20 18:53:28 2013