Query 009044
Match_columns 546
No_of_seqs 160 out of 245
Neff 5.8
Searched_HMMs 46136
Date Thu Mar 28 19:43:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009044.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/009044hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3566 Glycosylphosphatidylin 100.0 2.6E-97 6E-102 790.4 35.0 458 6-545 5-616 (617)
2 PF04114 Gaa1: Gaa1-like, GPI 100.0 7.6E-81 1.6E-85 679.2 27.2 343 145-544 2-503 (504)
3 PRK10199 alkaline phosphatase 99.0 5.1E-08 1.1E-12 102.8 20.2 118 93-225 55-189 (346)
4 PF04389 Peptidase_M28: Peptid 98.2 2.2E-05 4.7E-10 74.4 12.4 65 162-226 1-75 (179)
5 KOG2194 Aminopeptidases of the 98.1 2.2E-05 4.7E-10 90.2 13.0 175 46-274 38-229 (834)
6 PRK06133 glutamate carboxypept 97.4 0.003 6.5E-08 68.0 14.5 125 73-226 38-185 (410)
7 PRK08596 acetylornithine deace 97.3 0.0037 8E-08 67.5 14.0 125 73-224 14-165 (421)
8 TIGR01883 PepT-like peptidase 97.2 0.0034 7.4E-08 65.9 12.3 122 76-224 4-146 (361)
9 TIGR01892 AcOrn-deacetyl acety 97.1 0.004 8.7E-08 65.2 12.0 119 79-226 4-145 (364)
10 PRK09133 hypothetical protein; 97.1 0.0078 1.7E-07 66.0 14.7 128 72-226 37-191 (472)
11 TIGR01879 hydantase amidase, h 97.1 0.0044 9.5E-08 66.5 11.9 100 94-225 32-139 (401)
12 PRK08588 succinyl-diaminopimel 96.9 0.012 2.6E-07 62.2 13.5 119 74-224 4-147 (377)
13 PRK05111 acetylornithine deace 96.9 0.014 3.1E-07 61.7 13.9 122 74-225 7-157 (383)
14 PRK12890 allantoate amidohydro 96.8 0.011 2.4E-07 63.6 12.2 100 93-224 38-145 (414)
15 PRK12891 allantoate amidohydro 96.8 0.012 2.5E-07 63.6 11.9 96 94-221 41-144 (414)
16 PRK07522 acetylornithine deace 96.8 0.021 4.5E-07 60.4 13.7 123 74-226 6-151 (385)
17 TIGR01910 DapE-ArgE acetylorni 96.8 0.014 3E-07 61.8 12.3 109 93-226 21-154 (375)
18 PRK08652 acetylornithine deace 96.8 0.016 3.4E-07 60.3 12.4 115 74-225 4-133 (347)
19 PRK07906 hypothetical protein; 96.7 0.016 3.5E-07 62.5 12.4 122 76-225 3-154 (426)
20 TIGR01882 peptidase-T peptidas 96.7 0.059 1.3E-06 58.2 16.5 100 94-224 34-188 (410)
21 PRK12893 allantoate amidohydro 96.7 0.022 4.8E-07 61.1 13.1 121 73-225 11-148 (412)
22 PRK09290 allantoate amidohydro 96.6 0.018 3.9E-07 62.0 12.2 100 94-225 38-145 (413)
23 PRK12892 allantoate amidohydro 96.6 0.016 3.6E-07 62.0 11.5 99 94-225 40-146 (412)
24 PRK06446 hypothetical protein; 96.6 0.036 7.8E-07 60.3 13.8 122 74-226 4-151 (436)
25 PRK07473 carboxypeptidase; Pro 96.5 0.037 8E-07 59.1 13.7 126 74-226 13-161 (376)
26 PRK07907 hypothetical protein; 96.5 0.047 1E-06 59.6 14.2 121 73-225 19-169 (449)
27 PRK13013 succinyl-diaminopimel 96.4 0.067 1.5E-06 57.6 14.8 129 73-222 15-169 (427)
28 PRK13381 peptidase T; Provisio 96.4 0.032 6.9E-07 59.9 12.2 101 93-224 31-184 (404)
29 TIGR01893 aa-his-dipept aminoa 96.4 0.035 7.6E-07 61.2 12.4 117 74-225 6-153 (477)
30 PRK08262 hypothetical protein; 96.3 0.07 1.5E-06 58.8 14.6 141 48-225 27-202 (486)
31 PRK13009 succinyl-diaminopimel 96.3 0.068 1.5E-06 56.3 13.6 119 74-225 4-148 (375)
32 PRK06915 acetylornithine deace 96.2 0.072 1.6E-06 57.4 13.8 138 74-224 19-181 (422)
33 PRK06837 acetylornithine deace 96.2 0.083 1.8E-06 57.2 13.9 137 75-223 23-184 (427)
34 PRK04443 acetyl-lysine deacety 96.1 0.072 1.6E-06 56.0 12.9 115 74-226 8-137 (348)
35 PRK07338 hypothetical protein; 96.1 0.13 2.8E-06 55.0 14.8 117 94-226 41-178 (402)
36 PRK13983 diaminopimelate amino 96.1 0.1 2.2E-06 55.3 13.9 130 73-225 6-166 (400)
37 PRK09104 hypothetical protein; 96.0 0.1 2.2E-06 57.2 13.9 124 74-226 19-177 (464)
38 TIGR03176 AllC allantoate amid 96.0 0.055 1.2E-06 58.5 11.5 97 94-222 34-138 (406)
39 COG2234 Iap Predicted aminopep 95.9 0.043 9.3E-07 59.3 10.1 115 144-289 182-309 (435)
40 PRK13590 putative bifunctional 95.9 0.061 1.3E-06 61.2 11.5 96 94-221 215-319 (591)
41 PRK08201 hypothetical protein; 95.8 0.13 2.7E-06 56.3 13.4 102 94-225 41-168 (456)
42 PRK07205 hypothetical protein; 95.7 0.15 3.2E-06 55.6 13.4 122 70-225 9-164 (444)
43 TIGR01902 dapE-lys-deAc N-acet 95.7 0.086 1.9E-06 55.0 11.0 110 78-226 3-127 (336)
44 PRK05469 peptidase T; Provisio 95.6 0.14 3E-06 55.1 12.7 100 93-224 32-186 (408)
45 PRK00466 acetyl-lysine deacety 95.6 0.12 2.5E-06 54.3 11.8 111 73-225 11-136 (346)
46 COG0624 ArgE Acetylornithine d 95.6 0.19 4E-06 54.0 13.5 123 78-227 19-166 (409)
47 PRK13004 peptidase; Reviewed 95.5 0.26 5.6E-06 52.8 14.1 116 74-224 17-158 (399)
48 PRK08651 succinyl-diaminopimel 95.4 0.15 3.2E-06 54.2 12.0 129 73-226 7-160 (394)
49 PRK13799 unknown domain/N-carb 95.3 0.13 2.7E-06 58.7 11.5 97 94-222 215-320 (591)
50 PRK13007 succinyl-diaminopimel 95.2 0.23 4.9E-06 51.9 12.3 113 73-224 8-140 (352)
51 TIGR01880 Ac-peptdase-euk N-ac 95.2 0.37 7.9E-06 51.6 14.1 123 74-224 11-160 (400)
52 TIGR01891 amidohydrolases amid 95.1 0.28 6.1E-06 51.8 12.9 116 76-224 3-136 (363)
53 PRK15026 aminoacyl-histidine d 95.0 1.1 2.3E-05 50.0 17.3 183 73-304 11-232 (485)
54 PLN02693 IAA-amino acid hydrol 94.9 0.39 8.5E-06 52.6 13.4 119 72-225 47-183 (437)
55 PF05450 Nicastrin: Nicastrin; 94.9 0.52 1.1E-05 47.7 13.2 122 164-304 3-136 (234)
56 PRK07318 dipeptidase PepV; Rev 94.8 0.36 7.9E-06 53.0 12.9 117 74-225 16-166 (466)
57 TIGR03526 selenium_YgeY putati 94.5 0.67 1.5E-05 49.6 13.9 116 74-224 15-156 (395)
58 PRK07079 hypothetical protein; 94.1 0.88 1.9E-05 50.0 13.9 126 74-226 19-177 (469)
59 TIGR01246 dapE_proteo succinyl 93.8 0.86 1.9E-05 48.1 12.9 114 77-223 4-143 (370)
60 PRK08554 peptidase; Reviewed 93.7 1 2.2E-05 49.3 13.4 99 94-225 28-149 (438)
61 PLN02280 IAA-amino acid hydrol 93.4 1.2 2.7E-05 49.4 13.7 98 93-224 117-232 (478)
62 TIGR03320 ygeY M20/DapE family 92.9 1.7 3.8E-05 46.3 13.6 116 74-224 15-156 (395)
63 TIGR01886 dipeptidase dipeptid 92.6 1.6 3.6E-05 48.1 13.2 96 95-225 47-165 (466)
64 TIGR01887 dipeptidaselike dipe 92.4 1.7 3.8E-05 47.7 13.0 98 94-226 35-155 (447)
65 KOG2526 Predicted aminopeptida 91.8 0.6 1.3E-05 50.9 8.1 80 144-223 191-287 (555)
66 KOG2195 Transferrin receptor a 91.4 0.58 1.3E-05 54.3 8.1 83 144-228 336-424 (702)
67 TIGR01900 dapE-gram_pos succin 89.8 2.5 5.5E-05 45.0 10.7 112 80-225 4-155 (373)
68 COG4187 RocB Arginine degradat 89.4 5.9 0.00013 43.7 12.9 134 72-225 8-187 (553)
69 PRK06156 hypothetical protein; 88.7 7.6 0.00017 43.5 14.0 51 178-228 154-205 (520)
70 TIGR03107 glu_aminopep glutamy 86.0 12 0.00027 40.0 13.0 99 178-314 178-284 (350)
71 COG1363 FrvX Cellulase M and r 84.5 54 0.0012 35.4 16.9 100 178-317 180-291 (355)
72 PRK09864 putative peptidase; P 83.8 22 0.00048 38.3 13.7 97 178-315 175-284 (356)
73 KOG3946 Glutaminyl cyclase [Po 83.6 7.6 0.00016 40.5 9.6 96 93-211 72-179 (338)
74 PF09940 DUF2172: Domain of un 82.3 7.8 0.00017 41.9 9.4 64 158-226 126-189 (386)
75 PRK08737 acetylornithine deace 81.9 17 0.00037 38.7 12.1 112 73-225 7-144 (364)
76 KOG2275 Aminoacylase ACY1 and 77.6 41 0.00089 36.9 13.1 101 94-223 49-176 (420)
77 PF01546 Peptidase_M20: Peptid 74.6 14 0.0003 34.4 7.9 51 174-224 32-84 (189)
78 PF05343 Peptidase_M42: M42 gl 73.4 16 0.00034 38.2 8.6 100 178-315 134-243 (292)
79 KOG4783 Uncharacterized conser 69.5 4 8.7E-05 35.8 2.6 43 462-507 20-63 (102)
80 PRK09961 exoaminopeptidase; Pr 66.7 57 0.0012 34.8 11.2 100 178-315 166-276 (344)
81 TIGR03106 trio_M42_hydro hydro 52.1 53 0.0011 35.1 7.9 66 74-173 5-70 (343)
82 COG1473 AbgB Metal-dependent a 50.0 2.1E+02 0.0046 31.3 12.2 118 74-224 14-149 (392)
83 TIGR03106 trio_M42_hydro hydro 43.3 1.4E+02 0.0029 32.0 9.3 100 177-315 182-286 (343)
84 PRK09961 exoaminopeptidase; Pr 38.7 82 0.0018 33.6 6.8 63 76-173 4-66 (344)
85 TIGR03107 glu_aminopep glutamy 38.6 89 0.0019 33.5 7.1 63 78-173 4-66 (350)
86 PHA02673 ORF109 EEV glycoprote 27.9 51 0.0011 31.6 2.7 38 7-45 21-58 (161)
87 PRK09864 putative peptidase; P 21.6 2.5E+02 0.0054 30.4 6.8 61 77-173 5-65 (356)
No 1
>KOG3566 consensus Glycosylphosphatidylinositol anchor attachment protein GAA1 [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.6e-97 Score=790.39 Aligned_cols=458 Identities=36% Similarity=0.549 Sum_probs=381.0
Q ss_pred ccccccchhHHHHHHHHHhchhhHHHHHHHHHHHHHhcc--cCCcccccccccCCCcceeeeccchhhHHHHHHHHHHHh
Q 009044 6 VSKKRKRPIVRLAVLLLSHSVLVSVICCTAGVFGLLLLP--VLAKNTYISENALMPGSASSMLSNQEVSEANKLIKELNN 83 (546)
Q Consensus 6 ~~~~~~r~~~rl~~~l~~~~~~ls~ll~l~Gi~wll~LP--~~~r~TYISENALlPg~v~~~f~~~~~~~a~~y~~el~~ 83 (546)
++++|+|+++|+...++. .++++++++|+.|+++|+ .+.++|||||||||||||++||+..+++.++++.+++++
T Consensus 5 ~~~~~~~~~~~l~~r~ia---~lpv~s~v~g~awf~aL~~~pl~~rtyiSEnAlmpg~v~s~~~~~~~~~~~~~~~~~~~ 81 (617)
T KOG3566|consen 5 SDPIRQIPLVRLLIRHIA---HLPVFSYVAGLAWFFALALLPLLKRTYISENALMPGQVYSYFRNRDVSDASKLLKDIKN 81 (617)
T ss_pred ccchhhHHhHHHHHhhcc---cchHHHHHHHHHHHHHHhhchhcccceeeccccCccchhhhhhccchhhhHHHHHHHHH
Confidence 345899999998555555 455555666666666544 355999999999999999999999999999999999999
Q ss_pred hhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceE
Q 009044 84 LHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEA 163 (546)
Q Consensus 84 ~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEA 163 (546)
.+.. .+. ....|+...|++.|+|+++|+|... |+ + .+.|+|||||+||||+|||||
T Consensus 82 ~r~~-~s~--~~~~~~~~~~q~FGl~t~~~n~~~~----------------P~-e----~y~G~NvyGilRAPRgdgtEs 137 (617)
T KOG3566|consen 82 FRKH-ESQ--VPNAWAEVSMQEFGLETHTQNYSNG----------------PF-E----EYSGENVYGILRAPRGDGTES 137 (617)
T ss_pred HHHh-hcc--cchhHHHHHHHHhCccccccCccCC----------------ch-h----hcCCceEEEEEecCCCCCcce
Confidence 9883 322 6789999999999999999997542 11 1 356999999999999999999
Q ss_pred EEEEEeecCCCCCCcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCcccccccC
Q 009044 164 IVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHV 243 (546)
Q Consensus 164 IVL~ap~~~~~~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~~AWL~~YH~~~~~~~~~~~~~~~~~ 243 (546)
|||+|||+..+++ | ..|+++++|+++|++||+||||||||||+|+ ++.|++|||++||++... .. .+..
T Consensus 138 ivl~vP~~~~~~~-~-~~~v~l~lsla~~f~r~~yWsKDII~v~~d~---~~~g~~AwLeaYhd~~s~--~~----~~~e 206 (617)
T KOG3566|consen 138 IVLVVPYGRSSGS-N-SASVALLLSLADYFSRWVYWSKDIIFVFTDG---PALGLDAWLEAYHDILSL--TG----ISVE 206 (617)
T ss_pred EEEEEecccCCCc-c-hhHHHHHHHHHHHhcCCeeecccEEEEEeCC---ccccHHHHHHHhhccccc--cc----cccc
Confidence 9999999988776 4 5799999999999999999999999999997 789999999999985211 11 1111
Q ss_pred CCCCcccccccccccccceeeeEEEEecCCCCCCceEEEEeecCCCCCCChhHHHHHHHHHhhccCceEEEeeccccchh
Q 009044 244 GNNNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQFHWLLNS 323 (546)
Q Consensus 244 ~~~~~~~~~~~~~~raG~I~aAlvle~~~~~~~~~~l~I~~eG~NGqLPNLDLiN~v~~ia~~~~g~~v~l~~~~~~~~~ 323 (546)
+ .+...|+|+++||+++|+++. ..|+++|.+||+|||||||||+|+.. ++.+|+|++|++++..
T Consensus 207 p--------~~i~~ragal~aal~l~~se~--~~d~v~i~~eglNGqlPNLDlf~i~~-~~~~k~g~~v~l~g~~----- 270 (617)
T KOG3566|consen 207 P--------DEIQARAGALAAALVLEVSEK--FQDIVEIQYEGLNGQLPNLDLFNITQ-IFMQKEGLLVTLQGKL----- 270 (617)
T ss_pred c--------ccccccccceeeEEEEEeccc--cceeEEEEecccCCCCCcchHHHHHH-HHHHhcCceEEEecCc-----
Confidence 1 122369999999999999965 78999999999999999999997664 5556899999998732
Q ss_pred hhhhhhhhhHhhhhhhhhccCCCcccCCChhhHHHHHHHHHHHHHHhhcCCCCCccccccccccceEEEEEeeccccccc
Q 009044 324 KWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRDYQVDAITLEFSLRISFDRL 403 (546)
Q Consensus 324 ~wl~~~~~i~~~~g~~~~~~~p~~~~~~~~~~Y~~~l~tll~~m~~qA~G~ptg~Hg~F~~y~IdAiTL~~~~~~~~~~~ 403 (546)
..++|..+ ++|.+++++++.+++.||.|.|||+||+|++|||||+|++-..+...+
T Consensus 271 -------------------~~~d~~s~---~~~~s~l~tl~~~l~~QA~g~ptg~Hglf~~Y~vdaLTlrr~~~~s~~-- 326 (617)
T KOG3566|consen 271 -------------------LPLDWHSN---SMYLSGLKTLLLMLLTQASGSPTGIHGLFLRYRVDALTLRRILSDSFK-- 326 (617)
T ss_pred -------------------CCcccccC---chhhhhHHHHHHHHHHHHhcCCCCccccccccccceEEeccccccccc--
Confidence 12455433 489999999999999999999999999999999999999655432212
Q ss_pred ccchhHHHHHHHHHHHHHHhhchhhhhhhcceeEeeecCcc---------------------------------------
Q 009044 404 DRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPK--------------------------------------- 444 (546)
Q Consensus 404 ~~~~~~~~~lGRilE~~lRSlNNLLErlHqSFFfYlL~sp~--------------------------------------- 444 (546)
..+.| +.++||++|+++||+||||||||||||||++++|.
T Consensus 327 ~~~~d-~~~~gkaiEg~fRsLNNLLEr~HQSFF~YlL~~~~~FiSIg~YMpa~~~Lva~l~l~A~~~wi~l~e~~~~l~~ 405 (617)
T KOG3566|consen 327 QYGYD-LVRFGKAIEGMFRSLNNLLERFHQSFFFYLLLDPSRFISIGLYMPALVILVAPLGLKAYFLWINLHEAKIGLES 405 (617)
T ss_pred ccchH-HHHHHHHHHHHHHHHHHHHHHHhhheeeeeecCccceeehHHHHHHHHHHHHHHHHHHHHHHHhhhhhCCCccc
Confidence 22233 67999999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 009044 445 -------------------------------------------------------------------------------- 444 (546)
Q Consensus 445 -------------------------------------------------------------------------------- 444 (546)
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ll~~l~~~~~f~~~p~~~~~~l~~~~s~~~~~~~v~~~~~~v~~~~~~ 485 (617)
T KOG3566|consen 406 LAGHPYESVPTPVSQDIGLTSVLQWLLGPIVGLLPLLPSQVIFLHIPLGRAIFLVEPLSYLLLIVFVLPFSSLVLPGLCL 485 (617)
T ss_pred ccCCcccccccchhhcccchhhhhhHHHHHHHHHHhhhhhhhhccccccccccccchHHHHhhhheeecccccccccccc
Confidence
Q ss_pred ------------------------------chhHhHHHHHHHhcccchhhhhchhHHHHHHHHHHHhhhccCchh-HHHh
Q 009044 445 ------------------------------IGALLMVPMALMAHPLKLDVRGQSLRSILRMICNLVLGVISFPPA-TFFV 493 (546)
Q Consensus 445 ------------------------------IG~~l~vp~~L~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 493 (546)
+++..++|+|+++.|...-.+.+-.+..+-..|-.++..+++||. -+.+
T Consensus 486 ~n~~ll~lv~~l~~pi~fi~~~~~nf~~~~~aal~~vp~~i~~~~k~~~~r~~l~p~~l~~~~~~l~~si~~~~~~~~~~ 565 (617)
T KOG3566|consen 486 TNFALLKLVTILAVPIQFIMTTLSNFASGEFAALLPVPTLIFLEPKIPILRGRLAPLVLQAKWLALVLSIAMTAFDEEPL 565 (617)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHhccCCccccccccHHHHhhHHHHHHHHHhcchhhHHHH
Confidence 667888999999998887667777778888888888888889864 5667
Q ss_pred hhhhc-cCcccccc-cchHHHHHHHHhhcccceeeeeeehhhhHHHHhhhhccC
Q 009044 494 FKGVI-EGFSGINA-GDFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLHP 545 (546)
Q Consensus 494 ~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 545 (546)
.|+++ +++-+.++ +.+|.|.+.+|.|+ |.+++++|+|||+||..++||+
T Consensus 566 ~~~~~~~~~~gl~~~~~~~s~~~~yg~w~---~~~i~~g~lpcwll~~~~~f~~ 616 (617)
T KOG3566|consen 566 SKHFFLLCFFGLDIWNMLFSCSMRYGAWL---YFVIGTGSLPCWLLCLDGSFKK 616 (617)
T ss_pred HHHHHHhHHHhhhhHHHHHHHHHHhhhhh---hhheeccccchhheeecccccC
Confidence 88888 67799999 59999999999999 9999999999999999999997
No 2
>PF04114 Gaa1: Gaa1-like, GPI transamidase component ; InterPro: IPR007246 GPI (glycosyl phosphatidyl inositol) transamidase is a multiprotein complex required for a terminal step of adding the glycosylphosphatidylinositol (GPI) anchor attachment onto proteins. Gpi16, Gpi8 and Gaa1 form a sub-complex of the GPI transamidase.; GO: 0016021 integral to membrane, 0042765 GPI-anchor transamidase complex
Probab=100.00 E-value=7.6e-81 Score=679.17 Aligned_cols=343 Identities=40% Similarity=0.636 Sum_probs=279.1
Q ss_pred ccceEEEEEeCCCCCCceEEEEEEeecCCCCCCcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchhHHHHHHh
Q 009044 145 YGINTVGIIRAPRGDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRD 224 (546)
Q Consensus 145 ~G~NvygIlrAPRgdgtEAIVL~ap~~~~~~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~~AWL~~ 224 (546)
+|+|||||+|||||||||||||+|||++.+++.| ..|+++++|++||++|++||||||||||+|+ +..|++|||++
T Consensus 2 ~G~nvy~i~rapR~d~tEaivl~~~~~~~~~~~n-~~~v~l~lal~~~~~~~~~wsKDii~l~~~~---~~~g~~awl~~ 77 (504)
T PF04114_consen 2 SGTNVYGILRAPRGDGTEAIVLVVPWRDSDGEYN-AGGVALALALARYFRRQSYWSKDIIFLFTDD---ELAGMQAWLEA 77 (504)
T ss_pred CceEEEEEEecCCCCCceeEEEEEecCCCCcccc-hhhHHHHHHHHHHhhhchhhhccEEEEecCC---cchHHHHHHHH
Confidence 6999999999999999999999999998887665 7899999999999999999999999999996 57899999999
Q ss_pred hcCCCCCCCCCcccccccCCCCCcccccccccccccceeeeEEEEecCCCCCCceEEEEeecCCCCCCChhHHHHHHHHH
Q 009044 225 YHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNGQMPNLDLINIVHYLA 304 (546)
Q Consensus 225 YH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~raG~I~aAlvle~~~~~~~~~~l~I~~eG~NGqLPNLDLiN~v~~ia 304 (546)
||+++..+... .....|+|+||||+|+|+++. .+++++|++||.|||||||||||++++++
T Consensus 78 Yh~~~~~~~~~-----------------~~l~~~~G~i~aAl~le~~~~--~~~~v~i~~eG~NGqLPNLDL~N~~~~i~ 138 (504)
T PF04114_consen 78 YHDSNTKGLSS-----------------SPLPLRAGSIQAALVLEYPSD--SFSSVEIKYEGLNGQLPNLDLVNTVVRIA 138 (504)
T ss_pred HhCCCCccccc-----------------cCCCCCCcceeEEEEEEecCC--CccEEEEEEecCCCCCCCchHHHHHHHHH
Confidence 99975332211 123369999999999999976 56779999999999999999999999999
Q ss_pred hhccCceEEEeeccccchhhhhhhhhhhHhhhhhhhhccCCCcccCCChhhHHHHHHHHHHHHHHhhcCCCCCccccccc
Q 009044 305 VHRQGLRVKVEQFHWLLNSKWVKSLGEVFESLGKMVKTLNPDWKLGISAADYVEGAATLASSLYHQALGVPTGPHGAFRD 384 (546)
Q Consensus 305 ~~~~g~~v~l~~~~~~~~~~wl~~~~~i~~~~g~~~~~~~p~~~~~~~~~~Y~~~l~tll~~m~~qA~G~ptg~Hg~F~~ 384 (546)
+ ++|+++++...... .+|. +.++|..++++|+++|.+||+|.|+|+||+|++
T Consensus 139 ~-~~gi~~~~~~~~~~------------------------~~~~---~~~~~~~~l~~l~~~~~~~a~g~p~g~H~~f~~ 190 (504)
T PF04114_consen 139 E-KEGIPMGVSLHLQP------------------------SDWH---SNSDYESRLKTLLRGMLNQALGGPTGPHGAFLR 190 (504)
T ss_pred H-hcCCCccccccccc------------------------cccc---cccchHHHHHHHHHHHHHhccCCCCCCchhhhh
Confidence 7 67777665432110 1111 235899999999999999999999999999999
Q ss_pred cccceEEEEEeecccccccccchhHHHHHHHHHHHHHHhhchhhhhhhcceeEeeecCcc--------------------
Q 009044 385 YQVDAITLEFSLRISFDRLDRRNDFLLHGGRLIEGVIRSVNNLLEKFHQSFFLYLLTSPK-------------------- 444 (546)
Q Consensus 385 y~IdAiTL~~~~~~~~~~~~~~~~~~~~lGRilE~~lRSlNNLLErlHqSFFfYlL~sp~-------------------- 444 (546)
||||||||++.+..++ .+++ ++++||++|+++||+||||||||||||||+|++|+
T Consensus 191 y~I~aiTl~~~~~~~~----~~~~-~~~~gr~~E~~~RslNNLlE~~HqSff~Yll~~~~~fvsig~Ylp~~~ll~~~~~ 265 (504)
T PF04114_consen 191 YRIDAITLRGVKSTGP----GPHD-FTAFGRILEGIFRSLNNLLERFHQSFFFYLLLSPSRFVSIGTYLPAAVLLAASLL 265 (504)
T ss_pred cCccEEEEecccCCCC----CCcC-HHHHHHHHHHHHHHHHHHHHhHhheeeEeEecCCceEeehHHHHHHHHHHHHHHH
Confidence 9999999987654321 1233 47899999999999999999999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q 009044 445 -------------------------------------------------------------------------------- 444 (546)
Q Consensus 445 -------------------------------------------------------------------------------- 444 (546)
T Consensus 266 i~a~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 345 (504)
T PF04114_consen 266 ISALSLWLKSGASDISLESEYGSSAPSFWFVSLLESFGFSLPFLSVLSPLLVSHLIGFLLFLLPYLGQYIASQHFPSFRL 345 (504)
T ss_pred HHHHHHHHhCCccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhH
Confidence
Q ss_pred -----------------------------------------------------chhHhHHHHHHHhcccchhhhhc-hhH
Q 009044 445 -----------------------------------------------------IGALLMVPMALMAHPLKLDVRGQ-SLR 470 (546)
Q Consensus 445 -----------------------------------------------------IG~~l~vp~~L~~~pl~~~~~~~-~~~ 470 (546)
+.+.+.+|++++..|...+-..+ .++
T Consensus 346 ~~~~~~~lsl~~l~l~~~~~~~~~~~~llk~~~Ll~~~~~L~~la~lNFSLa~l~all~vPl~~~~~~~~~~s~~r~~~~ 425 (504)
T PF04114_consen 346 ESVVLLYLSLISLLLPFRVVLPPQQWALLKSFSLLLLGMFLSALATLNFSLAFLVALLLVPLCFIPRPSKQRSTLRSSLR 425 (504)
T ss_pred HHHHHHHHHHHHHHhcccccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCceecccCCcchhhhhHHHH
Confidence 22345677776666655331111 112
Q ss_pred HHH-----HHHHHHHhhhccCchhHHHhhhhhccCcccccccchHHHHHHHHhhcccceeeeeeehhhhHHHHhhhhcc
Q 009044 471 SIL-----RMICNLVLGVISFPPATFFVFKGVIEGFSGINAGDFWNWVESLWAWNSATYLYIGMVHLPCWVLCVQILLH 544 (546)
Q Consensus 471 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 544 (546)
..+ ...+++++.++++|+....+++...++ |...+..++.+++..|.|++.||.++.+|++|||++|.+++|-
T Consensus 426 ~a~L~l~~~~v~~l~ll~ls~~~~~~~~~~~~~~~-~~~~~~~l~~~v~~~~v~G~Wt~~vv~lv~lP~Wll~w~i~f~ 503 (504)
T PF04114_consen 426 SAVLLLNPPAVVLLVLLFLSFPFFPELLLKLFLDG-WQAVMDALTFAVFDWWVYGNWTFFVVCLVWLPCWLLCWNILFW 503 (504)
T ss_pred HHHhcccchHHHHHHHHHhhcchHHHHHHHHHhhh-hhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHcc
Confidence 221 245688888888999988888844444 5555678999999999999999999999999999999999873
No 3
>PRK10199 alkaline phosphatase isozyme conversion aminopeptidase; Provisional
Probab=98.96 E-value=5.1e-08 Score=102.76 Aligned_cols=118 Identities=13% Similarity=0.222 Sum_probs=89.8
Q ss_pred cchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecC
Q 009044 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (546)
Q Consensus 93 ~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~ 172 (546)
...++||.++|+++|+++..|.|+..- . +.... . ..+ .....|.||+|.+++ .+.|.||+++|||+
T Consensus 55 ~~aA~yL~~~f~~lG~~v~~q~f~~~~---~----~~~~~-g--~~~-~~~~~g~nVIa~~~G---~~~~~Ill~AH~DT 120 (346)
T PRK10199 55 MLSADYLRQQFQQMGYQSDIRTFNSRY---I----YTARD-N--RKN-WHNVTGSTVIAAHEG---KAPQQIIIMAHLDT 120 (346)
T ss_pred HHHHHHHHHHHHHCCCceEeeeccccc---e----eeccc-c--ccc-ccCCccceEEEEECC---CCCCeEEEEEEcCc
Confidence 357899999999999999988876421 0 00000 0 011 113578999999965 44689999999997
Q ss_pred CC-----------------CCCcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchhHHHHHHhh
Q 009044 173 VK-----------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (546)
Q Consensus 173 ~~-----------------~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~~AWL~~Y 225 (546)
.. |..|++.|++.+|.+++.|++.. ..++|.|++++++|.+..|.++|++..
T Consensus 121 V~p~~~~~~~~~~~g~~~~GA~DnasGvA~lLe~ar~l~~~~-~~~~I~fv~~~~EE~Gl~GS~~~~~~~ 189 (346)
T PRK10199 121 YAPQSDADVDANLGGLTLQGMDDNAAGLGVMLELAERLKNVP-TEYGIRFVATSGEEEGKLGAENLLKRM 189 (346)
T ss_pred CCCCCCCccccCCCCcccCCccccHHHHHHHHHHHHHHhhCC-CCCcEEEEEECCcccCcHHHHHHHHhc
Confidence 41 55677899999999999998765 578999999998888899999999873
No 4
>PF04389 Peptidase_M28: Peptidase family M28; InterPro: IPR007484 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This domain is found in metallopeptidases belonging to the MEROPS peptidase family M28 (aminopeptidase Y, clan MH) []. They also contain a transferrin receptor-like dimerisation domain (IPR007365 from INTERPRO) and a protease-associated PA domain (IPR003137 from INTERPRO).; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 3BXM_A 2C6P_A 1Z8L_C 3SJF_A 3BHX_A 2C6G_A 3D7F_A 2XEG_A 3BI1_A 2C6C_A ....
Probab=98.18 E-value=2.2e-05 Score=74.36 Aligned_cols=65 Identities=17% Similarity=0.237 Sum_probs=52.1
Q ss_pred eEEEEEEeecCC---------CCCCcchhhHHHHHHHHHHHhcC-CCCCcceEEEeeCCCCCCchhHHHHHHhhc
Q 009044 162 EAIVLVTPYNAV---------KGGVRETLSLGIAYSVFSLLTRV-TWLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (546)
Q Consensus 162 EAIVL~ap~~~~---------~~~~~~~~gval~LaL~~yl~r~-~~waKDIIfl~~D~~~g~~~G~~AWL~~YH 226 (546)
|.|||.+|||+. .|+.+++.|++++|.+||.|++. .-..|+|+||+.|+++.+..|.++|++..+
T Consensus 1 e~ivi~aH~Ds~~~~~~~~~~~GA~DnasGva~lLelAr~l~~~~~~~~~~i~fv~~~~EE~gl~GS~~~~~~~~ 75 (179)
T PF04389_consen 1 EYIVIGAHYDSVGGDADGSWSPGANDNASGVAALLELARVLKELKPQPKRTIRFVFFDGEEQGLLGSRAFVEHDH 75 (179)
T ss_dssp EEEEEEEE--BESCCC-TCSSS-TTTTHHHHHHHHHHHHHHHHSTHSSSEEEEEEEESSGGGTSHHHHHHHHHHH
T ss_pred CEEEEEeecCCCCCcCCCcccCCcccchHHHHHHHHHHHHHHHhhcccCccEEEEEecccccCccchHHHHHhhh
Confidence 789999999982 34556789999999999999873 333789999999999888999999999433
No 5
>KOG2194 consensus Aminopeptidases of the M20 family [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=98.13 E-value=2.2e-05 Score=90.17 Aligned_cols=175 Identities=17% Similarity=0.216 Sum_probs=114.5
Q ss_pred CCcccccccccCCCcceeeeccchhhHHHHHHHHHHHhhhcCCCCCc---cchHHHHHHHHHhcCCce---------eee
Q 009044 46 LAKNTYISENALMPGSASSMLSNQEVSEANKLIKELNNLHSNPLGAT---TESHGIIAKYMSNLGAQV---------NNH 113 (546)
Q Consensus 46 ~~r~TYISENALlPg~v~~~f~~~~~~~a~~y~~el~~~~~~~~~~~---~~~~~~I~~~l~~lGle~---------~~q 113 (546)
+.++....+-+..|+| |++ .+|..-..++.+.-.++.++. ...+++|.+++.++.-.. ..|
T Consensus 38 ~~~pl~~~~e~~~~~~----f~~---~rA~~~l~~ls~~G~~~~gS~~ne~~a~~~il~e~~~i~~~~~~~~~~~Evd~q 110 (834)
T KOG2194|consen 38 LPEPLTQPQEQTLPSQ----FSE---ARALKDLLSLSAAGPHPVGSDNNEMHASSFILKEVNKIRKGSQSDLYDMEVDLQ 110 (834)
T ss_pred ccccCCCcchhcCchh----hHH---HHHHHHHHHHHhcCCcccCchhhHHHHHHHHHHHHHHHHhhhhcchhhheecee
Confidence 4666666666666655 332 345555566666543332221 235678888887765433 222
Q ss_pred ecccCCCcCCCcccccCCCCCccccCCc-cccccceEEEEEeCCCCCCceEEEEEEeecCC---CCCCcchhhHHHHHHH
Q 009044 114 KFHPQLNQFHPLHFFSGPDSGVMQENST-RSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV---KGGVRETLSLGIAYSV 189 (546)
Q Consensus 114 ~f~~~~~~f~~~~~f~~~~~~~~~~n~~-~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~~---~~~~~~~~gval~LaL 189 (546)
.... .+ ..++.+ +=....||+-.+-.--++.+++++|.++||+. .|+.|+..++|.+|++
T Consensus 111 ~~sg---------------~~-~~~~~~~~Y~~i~NIvVki~~k~~~~~~~lLlnaHfDSvpt~~gAtDDg~~va~mLe~ 174 (834)
T KOG2194|consen 111 SASG---------------SF-ILEGMTLVYQNISNIVVKISPKNGNDKNALLLNAHFDSVPTGPGATDDGSGVASMLEA 174 (834)
T ss_pred eccc---------------ee-eehhhhheeeeeeeEEEecCCCCCCccceeeeeccccccCCCCCCCcchhHHHHHHHH
Confidence 2111 01 001111 11456788777766666777799999999985 3456778999999999
Q ss_pred HHHHh-cCCCCCcceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCcccccccCCCCCcccccccccccccceeeeEEE
Q 009044 190 FSLLT-RVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVL 268 (546)
Q Consensus 190 ~~yl~-r~~~waKDIIfl~~D~~~g~~~G~~AWL~~YH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~raG~I~aAlvl 268 (546)
+|++. +.+-+-+||||||-++++.+..|..+|..+ | ++. +. +.|.+||
T Consensus 175 lRv~s~~~~~l~~~vVFLfNgaEE~~L~gsH~FItQ-H-------~w~-----------------~~------~ka~INL 223 (834)
T KOG2194|consen 175 LRVLSKSDKLLTHSVVFLFNGAEESGLLGSHAFITQ-H-------PWS-----------------KN------IKAVINL 223 (834)
T ss_pred HHHhhcCCCcccccEEEEecCcccchhhhcccceec-C-------hhh-----------------hh------hheEEec
Confidence 99885 466779999999999998889999999776 3 331 11 7899999
Q ss_pred EecCCC
Q 009044 269 GVAYGN 274 (546)
Q Consensus 269 e~~~~~ 274 (546)
|..+.+
T Consensus 224 ea~GsG 229 (834)
T KOG2194|consen 224 EAAGSG 229 (834)
T ss_pred cccCcc
Confidence 988764
No 6
>PRK06133 glutamate carboxypeptidase; Reviewed
Probab=97.38 E-value=0.003 Score=68.04 Aligned_cols=125 Identities=16% Similarity=0.203 Sum_probs=85.0
Q ss_pred HHHHHHHHHHhhhcCCCCC--ccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEE
Q 009044 73 EANKLIKELNNLHSNPLGA--TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (546)
Q Consensus 73 ~a~~y~~el~~~~~~~~~~--~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~Nvy 150 (546)
.+.++.+++-+....+... .....+||.++|+++|+++..+... ...+.|++
T Consensus 38 ~~~~~l~~lv~i~S~s~~~~~~~~~~~~l~~~L~~~G~~v~~~~~~--------------------------~~~~~~li 91 (410)
T PRK06133 38 AYLDTLKELVSIESGSGDAEGLKQVAALLAERLKALGAKVERAPTP--------------------------PSAGDMVV 91 (410)
T ss_pred HHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEEEccC--------------------------CCCCCeEE
Confidence 3445555665555443221 1247899999999999997755421 11356999
Q ss_pred EEEeCCCCCCceEEEEEEeecCCC--------------------CCCcchhhHHHHHHHHHHHhcCCC-CCcceEEEeeC
Q 009044 151 GIIRAPRGDGKEAIVLVTPYNAVK--------------------GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVAD 209 (546)
Q Consensus 151 gIlrAPRgdgtEAIVL~ap~~~~~--------------------~~~~~~~gval~LaL~~yl~r~~~-waKDIIfl~~D 209 (546)
+.+.+ .+...|++.+++|... |..+...+++.+++.++++++... +..+|.|+|+-
T Consensus 92 a~~~g---~~~~~ill~~H~D~Vp~~~~w~~~Pf~~~~~~iyGrG~~D~kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~ 168 (410)
T PRK06133 92 ATFKG---TGKRRIMLIAHMDTVYLPGMLAKQPFRIDGDRAYGPGIADDKGGVAVILHALKILQQLGFKDYGTLTVLFNP 168 (410)
T ss_pred EEECC---CCCceEEEEeecCccCCCCccCCCCEEEECCEEECCccccchHHHHHHHHHHHHHHHcCCCCCCCEEEEEEC
Confidence 99865 2335799999998652 112345689999999999877653 45799999975
Q ss_pred CCCCCchhHHHHHHhhc
Q 009044 210 SQYGEYAPVAAWLRDYH 226 (546)
Q Consensus 210 ~~~g~~~G~~AWL~~YH 226 (546)
+++.+..|++.+++++.
T Consensus 169 dEE~g~~G~~~~~~~~~ 185 (410)
T PRK06133 169 DEETGSPGSRELIAELA 185 (410)
T ss_pred CcccCCccHHHHHHHHh
Confidence 55545579999998864
No 7
>PRK08596 acetylornithine deacetylase; Validated
Probab=97.30 E-value=0.0037 Score=67.55 Aligned_cols=125 Identities=19% Similarity=0.221 Sum_probs=84.5
Q ss_pred HHHHHHHHHHhhhcCCC--CCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEE
Q 009044 73 EANKLIKELNNLHSNPL--GATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (546)
Q Consensus 73 ~a~~y~~el~~~~~~~~--~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~Nvy 150 (546)
.+.++.++|-+....+. .+..+..+||+++|+++|+++..+... ....|++
T Consensus 14 ~~~~~l~~Lv~i~S~s~~~~~e~~~a~~l~~~l~~~G~~~~~~~~~---------------------------~~~~nvi 66 (421)
T PRK08596 14 ELLELLKTLVRFETPAPPARNTNEAQEFIAEFLRKLGFSVDKWDVY---------------------------PNDPNVV 66 (421)
T ss_pred HHHHHHHHHhcCCCCCCCchhHHHHHHHHHHHHHHCCCeEEEEEcc---------------------------CCCceEE
Confidence 44555666666555432 122356899999999999987766421 0135999
Q ss_pred EEEeCCCCCCceEEEEEEeecCCC------------------------CCCcchhhHHHHHHHHHHHhcCC-CCCcceEE
Q 009044 151 GIIRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIW 205 (546)
Q Consensus 151 gIlrAPRgdgtEAIVL~ap~~~~~------------------------~~~~~~~gval~LaL~~yl~r~~-~waKDIIf 205 (546)
+.+++-..++...|+|..|+|... |..|...+++.+++.++.+++.. -+..||+|
T Consensus 67 a~~~g~~~~~~~~lll~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~ 146 (421)
T PRK08596 67 GVKKGTESDAYKSLIINGHMDVAEVSADEAWETNPFEPTIKDGWLYGRGAADMKGGLAGALFAIQLLHEAGIELPGDLIF 146 (421)
T ss_pred EEecCCCCCCCcEEEEeccccccCCCCccccccCCCCcEEECCEEEeccccccchHHHHHHHHHHHHHHcCCCCCCcEEE
Confidence 999752222235799999987631 12234578888898888887654 46889999
Q ss_pred EeeCCCCCCchhHHHHHHh
Q 009044 206 LVADSQYGEYAPVAAWLRD 224 (546)
Q Consensus 206 l~~D~~~g~~~G~~AWL~~ 224 (546)
+++-+++.+..|++.++++
T Consensus 147 ~~~~dEE~g~~G~~~~~~~ 165 (421)
T PRK08596 147 QSVIGEEVGEAGTLQCCER 165 (421)
T ss_pred EEEeccccCCcCHHHHHhc
Confidence 9975555556799999876
No 8
>TIGR01883 PepT-like peptidase T-like protein. This model represents a clade of enzymes closely related to Peptidase T, an aminotripeptidase found in bacteria. This clade consists of gram positive bacteria of which several additionally contain a Peptidase T gene.
Probab=97.21 E-value=0.0034 Score=65.88 Aligned_cols=122 Identities=11% Similarity=0.097 Sum_probs=82.7
Q ss_pred HHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeC
Q 009044 76 KLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRA 155 (546)
Q Consensus 76 ~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrA 155 (546)
+..++|-+....+.. .....+||.++|+++|+++..+..... ...+.|+++++++
T Consensus 4 ~~~~~l~~i~s~s~~-e~~~~~~l~~~l~~~g~~~~~~~~~~~------------------------~~~~~~~~~~~~g 58 (361)
T TIGR01883 4 KYFLELIQIDSESGK-EKAILTYLKKQITKLGIPVSLDEVPAE------------------------VSNDNNLIARLPG 58 (361)
T ss_pred HHHHHHeecCCCCCc-HHHHHHHHHHHHHHcCCEEEEeccccc------------------------cCCCceEEEEEeC
Confidence 344555555544433 236789999999999998776542110 1135799999976
Q ss_pred CCCCCceEEEEEEeecCCCC-----------------C----CcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCC
Q 009044 156 PRGDGKEAIVLVTPYNAVKG-----------------G----VRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGE 214 (546)
Q Consensus 156 PRgdgtEAIVL~ap~~~~~~-----------------~----~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~ 214 (546)
. ++...|+|.++.|.... . .+...+++.+|..++.+++..-+..+|.|+|+-+++.+
T Consensus 59 ~--~~~~~i~l~~H~D~V~~~~~~~~~~~~~~~~g~G~~~~g~D~k~g~a~~l~~~~~l~~~~~~~~~v~~~~~~~EE~g 136 (361)
T TIGR01883 59 T--VKFDTIFFCGHMDTVPPGAGPEPVVEDGIFTSLGGTILGADDKAGVAAMLEAMDVLSTEETPHGTIEFIFTVKEELG 136 (361)
T ss_pred C--CCCCcEEEEeeccccCCCCCCCceecCCeEecCCCeEeeccccHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccC
Confidence 3 23357999999876321 1 23457899999999988765445679999997555556
Q ss_pred chhHHHHHHh
Q 009044 215 YAPVAAWLRD 224 (546)
Q Consensus 215 ~~G~~AWL~~ 224 (546)
..|++.|++.
T Consensus 137 ~~G~~~~~~~ 146 (361)
T TIGR01883 137 LIGMRLFDES 146 (361)
T ss_pred chhHhHhChh
Confidence 6799988764
No 9
>TIGR01892 AcOrn-deacetyl acetylornithine deacetylase (ArgE). This model represents a clade of acetylornithine deacetylases from proteobacteria. This enzyme is the final step of the "acetylated" ornithine biosynthesis pathway. The enzyme is closely related to dapE, succinyl-diaminopimelate desuccinylase, and outside of this clade annotation is very inaccurate as to which function should be ascribed to genes.
Probab=97.15 E-value=0.004 Score=65.17 Aligned_cols=119 Identities=16% Similarity=0.140 Sum_probs=81.4
Q ss_pred HHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCC
Q 009044 79 KELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRG 158 (546)
Q Consensus 79 ~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRg 158 (546)
++|-+..+.+.+...+..+||.++|+++|+++..+.... ...+.|+++.+.+
T Consensus 4 ~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~~-------------------------~~~~~nl~~~~~~--- 55 (364)
T TIGR01892 4 TKLVAFDSTSFRPNVDLIDWAQAYLEALGFSVEVQPFPD-------------------------GAEKSNLVAVIGP--- 55 (364)
T ss_pred HHhhCcCCcCCccHHHHHHHHHHHHHHcCCeEEEEeCCC-------------------------CCccccEEEEecC---
Confidence 444444443332213678999999999999987665211 1135799999843
Q ss_pred CCceEEEEEEeecCCC-----------------------CCCcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCc
Q 009044 159 DGKEAIVLVTPYNAVK-----------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEY 215 (546)
Q Consensus 159 dgtEAIVL~ap~~~~~-----------------------~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~ 215 (546)
.+...|+|.+|+|... |..|...+++.+|+.+++|++.. +..+|.++|+-+++.+.
T Consensus 56 ~~~~~i~l~~H~Dtvp~~~~~w~~~Pf~~~~~~~~i~GrG~~D~Kg~~a~~l~a~~~l~~~~-~~~~v~~~~~~~EE~g~ 134 (364)
T TIGR01892 56 SGAGGLALSGHTDVVPYDDAAWTRDPFRLTEKDGRLYGRGTCDMKGFLACALAAAPDLAAEQ-LKKPLHLALTADEEVGC 134 (364)
T ss_pred CCCCeEEEEcccccccCCCCcCCCCCCcceeeCCEEEecCccccchHHHHHHHHHHHHHhcC-cCCCEEEEEEeccccCC
Confidence 2456799998886531 11233567999999999998765 58899999975555456
Q ss_pred hhHHHHHHhhc
Q 009044 216 APVAAWLRDYH 226 (546)
Q Consensus 216 ~G~~AWL~~YH 226 (546)
.|++..++++.
T Consensus 135 ~G~~~~~~~~~ 145 (364)
T TIGR01892 135 TGAPKMIEAGA 145 (364)
T ss_pred cCHHHHHHhcC
Confidence 79999998864
No 10
>PRK09133 hypothetical protein; Provisional
Probab=97.14 E-value=0.0078 Score=65.99 Aligned_cols=128 Identities=21% Similarity=0.211 Sum_probs=87.6
Q ss_pred HHHHHHHHHHHhhhcCCC-CCccchHHHHHHHHHhcCCceeeee-cccCCCcCCCcccccCCCCCccccCCccccccceE
Q 009044 72 SEANKLIKELNNLHSNPL-GATTESHGIIAKYMSNLGAQVNNHK-FHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINT 149 (546)
Q Consensus 72 ~~a~~y~~el~~~~~~~~-~~~~~~~~~I~~~l~~lGle~~~q~-f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~Nv 149 (546)
+.+.++.++|-+..+.+. +......+||.++|+++|+++...+ +.. .....|+
T Consensus 37 ~~~~~~l~~Lv~i~S~s~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~-------------------------~~~~~nl 91 (472)
T PRK09133 37 QAARDLYKELIEINTTASTGSTTPAAEAMAARLKAAGFADADIEVTGP-------------------------YPRKGNL 91 (472)
T ss_pred HHHHHHHHHHhccCCCCCCcchHHHHHHHHHHHHHcCCCceEEEeccC-------------------------CCCceeE
Confidence 345566666666665441 2233578999999999999865332 110 0124699
Q ss_pred EEEEeCCCCCCceEEEEEEeecCC-----------------------CCCCcchhhHHHHHHHHHHHhcCC-CCCcceEE
Q 009044 150 VGIIRAPRGDGKEAIVLVTPYNAV-----------------------KGGVRETLSLGIAYSVFSLLTRVT-WLAKDIIW 205 (546)
Q Consensus 150 ygIlrAPRgdgtEAIVL~ap~~~~-----------------------~~~~~~~~gval~LaL~~yl~r~~-~waKDIIf 205 (546)
++.++++. +...++|..|+|.. .|..|...+++.++..++++++.. -..++|.|
T Consensus 92 i~~~~g~~--~~~~lll~~H~DtVp~~~~~W~~dPf~~~~~dg~iyGRGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~ 169 (472)
T PRK09133 92 VARLRGTD--PKKPILLLAHMDVVEAKREDWTRDPFKLVEENGYFYGRGTSDDKADAAIWVATLIRLKREGFKPKRDIIL 169 (472)
T ss_pred EEEecCCC--CCCcEEEEeecccCCCChhcCCCCCCcceEeCCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCCCEEE
Confidence 99997642 23679998888753 122345678999998888887654 35679999
Q ss_pred EeeCCCC-CCchhHHHHHHhhc
Q 009044 206 LVADSQY-GEYAPVAAWLRDYH 226 (546)
Q Consensus 206 l~~D~~~-g~~~G~~AWL~~YH 226 (546)
+++-+++ ++..|++.+++++.
T Consensus 170 ~~~~dEE~~g~~G~~~l~~~~~ 191 (472)
T PRK09133 170 ALTGDEEGTPMNGVAWLAENHR 191 (472)
T ss_pred EEECccccCccchHHHHHHHHh
Confidence 9986666 67789999998764
No 11
>TIGR01879 hydantase amidase, hydantoinase/carbamoylase family. Enzymes in this subfamily hydrolize the amide bonds of compounds containing carbamoyl groups or hydantoin rings. These enzymes are members of the broader family of amidases represented by pfam01546.
Probab=97.09 E-value=0.0044 Score=66.51 Aligned_cols=100 Identities=15% Similarity=0.088 Sum_probs=75.5
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecCC
Q 009044 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (546)
Q Consensus 94 ~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~~ 173 (546)
+.++||.++|+++|+++.... . .|++|.+++.. .+...+++..|+|..
T Consensus 32 ~~~~~l~~~~~~~G~~~~~~~------------------------------~-~nl~a~~~g~~-~~~~~l~~~~H~DtV 79 (401)
T TIGR01879 32 EAQDLFKKRMRAAGLEVRFDE------------------------------V-GNLIGRKEGTE-PPLEVVLSGSHIDTV 79 (401)
T ss_pred HHHHHHHHHHHHCCCEEEEec------------------------------C-CcEEEEecCCC-CCCCEEEEecccccC
Confidence 578999999999999976431 1 39999997622 134789999999886
Q ss_pred --CCCCcchhhHHHHHHHHHHHhcCCC-CCcceEEEeeCCCCC-----CchhHHHHHHhh
Q 009044 174 --KGGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYG-----EYAPVAAWLRDY 225 (546)
Q Consensus 174 --~~~~~~~~gval~LaL~~yl~r~~~-waKDIIfl~~D~~~g-----~~~G~~AWL~~Y 225 (546)
.+..+...|++.+++.++.+++... +.+||+|+++-++++ +..|.+.|+...
T Consensus 80 ~~gg~~dg~~gvaa~l~a~~~l~~~g~~~~~~i~~~~~~dEE~~~f~~~~~Gs~~~~~~~ 139 (401)
T TIGR01879 80 VNGGNFDGQLGVLAGIEVVDALKEAYVVPLHPIEVVAFTEEEGSRFPYGMWGSRNMVGLA 139 (401)
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEeCCcCcCcccccccHHHHhccc
Confidence 2333446789999999999877654 799999999866554 567888888653
No 12
>PRK08588 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=96.95 E-value=0.012 Score=62.21 Aligned_cols=119 Identities=13% Similarity=0.072 Sum_probs=81.7
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEE
Q 009044 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIl 153 (546)
+.++.++|-+.+..+.+ .....+||.++|+++|+++..+... ..+.|+++.+
T Consensus 4 ~~~~l~~Lv~i~s~s~~-e~~~~~~l~~~l~~~G~~~~~~~~~---------------------------~~~~~l~a~~ 55 (377)
T PRK08588 4 KIQILADIVKINSVNDN-EIEVANYLQDLFAKHGIESKIVKVN---------------------------DGRANLVAEI 55 (377)
T ss_pred HHHHHHHHhcCCCCCCc-HHHHHHHHHHHHHHCCCceEEEecC---------------------------CCCceEEEEe
Confidence 44556666666655443 3367899999999999997655421 1246899887
Q ss_pred eCCCCCCceEEEEEEeecCCCC------------------------CCcchhhHHHHHHHHHHHhcC-CCCCcceEEEee
Q 009044 154 RAPRGDGKEAIVLVTPYNAVKG------------------------GVRETLSLGIAYSVFSLLTRV-TWLAKDIIWLVA 208 (546)
Q Consensus 154 rAPRgdgtEAIVL~ap~~~~~~------------------------~~~~~~gval~LaL~~yl~r~-~~waKDIIfl~~ 208 (546)
.+ +...|++.+++|.... ..|...+++.++..++.|++. ..+.++|.|+|+
T Consensus 56 g~----~~~~il~~~H~DtVp~~~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~l~~~ 131 (377)
T PRK08588 56 GS----GSPVLALSGHMDVVAAGDVDKWTYDPFELTEKDGKLYGRGATDMKSGLAALVIAMIELKEQGQLLNGTIRLLAT 131 (377)
T ss_pred CC----CCceEEEEeeecccCCCCcccCcCCCCCeEEECCEEEecCcccccchHHHHHHHHHHHHHcCCCCCCcEEEEEE
Confidence 32 3378999998876421 113345788777777777654 456899999997
Q ss_pred CCCCCCchhHHHHHHh
Q 009044 209 DSQYGEYAPVAAWLRD 224 (546)
Q Consensus 209 D~~~g~~~G~~AWL~~ 224 (546)
-+++.+..|++.++++
T Consensus 132 ~dEE~g~~G~~~~~~~ 147 (377)
T PRK08588 132 AGEEVGELGAKQLTEK 147 (377)
T ss_pred cccccCchhHHHHHhc
Confidence 5555556799999987
No 13
>PRK05111 acetylornithine deacetylase; Provisional
Probab=96.93 E-value=0.014 Score=61.67 Aligned_cols=122 Identities=13% Similarity=0.128 Sum_probs=80.6
Q ss_pred HHHHHHHHHhhhcCCCCCc------cchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccc
Q 009044 74 ANKLIKELNNLHSNPLGAT------TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGI 147 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~------~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~ 147 (546)
..+++++|-+..+-+.... ....+||.++|+++|+++..+.... ...+.
T Consensus 7 ~i~~l~~lv~i~s~s~~e~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-------------------------~~~~~ 61 (383)
T PRK05111 7 FIEMYRALIATPSISATDPALDQSNRAVIDLLAGWFEDLGFNVEIQPVPG-------------------------TRGKF 61 (383)
T ss_pred HHHHHHHHhCcCCcCCCCcccccchHHHHHHHHHHHHHCCCeEEEEecCC-------------------------CCCCc
Confidence 4455566666555443221 2478999999999999877664210 01246
Q ss_pred eEEEEEeCCCCCCceEEEEEEeecCCC-----------------------CCCcchhhHHHHHHHHHHHhcCCCCCcceE
Q 009044 148 NTVGIIRAPRGDGKEAIVLVTPYNAVK-----------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDII 204 (546)
Q Consensus 148 NvygIlrAPRgdgtEAIVL~ap~~~~~-----------------------~~~~~~~gval~LaL~~yl~r~~~waKDII 204 (546)
|++|.+.. +.+.|++.+|+|... |..|...+++.+++.++.|++.. +..||+
T Consensus 62 nvia~~g~----~~~~il~~~H~Dvvp~~~~~W~~~Pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~-~~~~i~ 136 (383)
T PRK05111 62 NLLASLGS----GEGGLLLAGHTDTVPFDEGRWTRDPFTLTEHDGKLYGLGTADMKGFFAFILEALRDIDLTK-LKKPLY 136 (383)
T ss_pred eEEEEeCC----CCCeEEEEeeeceecCCCCcCcCCCCccEEECCEEEecccccccHHHHHHHHHHHHHhhcC-CCCCeE
Confidence 99999832 224599888876531 11223457888888888887654 478999
Q ss_pred EEeeCCCCCCchhHHHHHHhh
Q 009044 205 WLVADSQYGEYAPVAAWLRDY 225 (546)
Q Consensus 205 fl~~D~~~g~~~G~~AWL~~Y 225 (546)
|+|+-+++.+..|++.+++++
T Consensus 137 ~~~~~~EE~g~~G~~~~~~~~ 157 (383)
T PRK05111 137 ILATADEETSMAGARAFAEAT 157 (383)
T ss_pred EEEEeccccCcccHHHHHhcC
Confidence 999755555567999999874
No 14
>PRK12890 allantoate amidohydrolase; Reviewed
Probab=96.84 E-value=0.011 Score=63.65 Aligned_cols=100 Identities=13% Similarity=0.141 Sum_probs=73.1
Q ss_pred cchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecC
Q 009044 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (546)
Q Consensus 93 ~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~ 172 (546)
....+||.++|+++|+++..+. +.|+++.+++.. .+...|++..|+|.
T Consensus 38 ~~~~~~l~~~l~~~G~~~~~~~-------------------------------~~nlia~~~g~~-~~~~~l~~~~H~Dt 85 (414)
T PRK12890 38 RAARALLAAWMRAAGLEVRRDA-------------------------------AGNLFGRLPGRD-PDLPPLMTGSHLDT 85 (414)
T ss_pred HHHHHHHHHHHHHCCCEEEEcC-------------------------------CCcEEEEeCCCC-CCCCEEEEeCcccC
Confidence 3578999999999999876431 238999996532 23458999999998
Q ss_pred CC--CCCcchhhHHHHHHHHHHHhcCC-CCCcceEEEeeCCCCC-----CchhHHHHHHh
Q 009044 173 VK--GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYG-----EYAPVAAWLRD 224 (546)
Q Consensus 173 ~~--~~~~~~~gval~LaL~~yl~r~~-~waKDIIfl~~D~~~g-----~~~G~~AWL~~ 224 (546)
.- +..+...|++.+++.++.+++.. -+.+||+|+++-++++ +..|.+++.+.
T Consensus 86 Vp~~g~~D~~~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~G~~~~~~~ 145 (414)
T PRK12890 86 VPNGGRYDGILGVLAGLEVVAALREAGIRPPHPLEVIAFTNEEGVRFGPSMIGSRALAGT 145 (414)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEecccccccCCccccHHHHHcc
Confidence 63 33455779999999999887643 3689999999866554 34677776554
No 15
>PRK12891 allantoate amidohydrolase; Reviewed
Probab=96.78 E-value=0.012 Score=63.61 Aligned_cols=96 Identities=9% Similarity=0.103 Sum_probs=70.5
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecCC
Q 009044 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (546)
Q Consensus 94 ~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~~ 173 (546)
+.++||.++|++.|+++.... .| |+++.+++. ..+...+++..|+|..
T Consensus 41 ~~~~~l~~~l~~~G~~v~~~~------------------------------~g-Nl~a~~~g~-~~~~~~l~~~~H~DtV 88 (414)
T PRK12891 41 EARDLFVAWARDAGCTVRVDA------------------------------MG-NLFARRAGR-DPDAAPVMTGSHADSQ 88 (414)
T ss_pred HHHHHHHHHHHHCCCEEEECC------------------------------CC-CEEEEecCC-CCCCCeEEEEecccCC
Confidence 578999999999999977531 12 899999652 2244789999999986
Q ss_pred C--CCCcchhhHHHHHHHHHHHhcCC-CCCcceEEEeeCCCCCC-----chhHHHH
Q 009044 174 K--GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGE-----YAPVAAW 221 (546)
Q Consensus 174 ~--~~~~~~~gval~LaL~~yl~r~~-~waKDIIfl~~D~~~g~-----~~G~~AW 221 (546)
- +..+...||+.++..++.|++.. -+.+||.++++-+++++ ..|..+|
T Consensus 89 p~gg~~D~k~Gv~a~l~a~~~l~~~~~~~~~~i~v~~~~dEE~~~f~~~~~Gs~~~ 144 (414)
T PRK12891 89 PTGGRYDGIYGVLGGLEVVRALNDAGIETERPVDVVIWTNEEGSRFAPSMVGSGVF 144 (414)
T ss_pred CCCccccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEecccccCcCCcccccHHHH
Confidence 3 33455789999999999987643 46899999997555542 3476655
No 16
>PRK07522 acetylornithine deacetylase; Provisional
Probab=96.78 E-value=0.021 Score=60.43 Aligned_cols=123 Identities=11% Similarity=0.067 Sum_probs=83.3
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEE
Q 009044 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIl 153 (546)
+.++.++|-+.++.+++...+..+||.++|+++|+++..+.-. ...+.|+++.+
T Consensus 6 ~~~~l~~lv~i~S~s~~~~~~~~~~l~~~l~~~G~~~~~~~~~--------------------------~~~~~nv~a~~ 59 (385)
T PRK07522 6 SLDILERLVAFDTVSRDSNLALIEWVRDYLAAHGVESELIPDP--------------------------EGDKANLFATI 59 (385)
T ss_pred HHHHHHHHhCCCCcCCCccHHHHHHHHHHHHHcCCeEEEEecC--------------------------CCCcccEEEEe
Confidence 4566677777666554332367899999999999997665310 01246899987
Q ss_pred eCCCCCCceEEEEEEeecCCC-----------------------CCCcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCC
Q 009044 154 RAPRGDGKEAIVLVTPYNAVK-----------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADS 210 (546)
Q Consensus 154 rAPRgdgtEAIVL~ap~~~~~-----------------------~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~ 210 (546)
++ +....+++.+|.|... |..|...+++.+++.++.|++.. +.++|.|+|+-+
T Consensus 60 ~~---~~~~~ill~~H~Dtv~~~~~~W~~~pf~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~~~-~~~~i~~~~~~d 135 (385)
T PRK07522 60 GP---ADRGGIVLSGHTDVVPVDGQAWTSDPFRLTERDGRLYGRGTCDMKGFIAAALAAVPELAAAP-LRRPLHLAFSYD 135 (385)
T ss_pred CC---CCCCeEEEEeecccccCCCCCCCCCCCceEEECCEEEeccccccchHHHHHHHHHHHHHhCC-CCCCEEEEEEec
Confidence 43 2234799999887421 11223467888888888887765 478999999644
Q ss_pred CCCCchhHHHHHHhhc
Q 009044 211 QYGEYAPVAAWLRDYH 226 (546)
Q Consensus 211 ~~g~~~G~~AWL~~YH 226 (546)
++.+..|++..++++.
T Consensus 136 EE~g~~G~~~l~~~~~ 151 (385)
T PRK07522 136 EEVGCLGVPSMIARLP 151 (385)
T ss_pred cccCCccHHHHHHHhh
Confidence 4444579999998753
No 17
>TIGR01910 DapE-ArgE acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase. This group of sequences contains annotations for both acetylornithine deacetylase and succinyl-diaminopimelate desuccinylase, but does not contain any members with experimental characterization. Bacillus, Staphylococcus and Sulfolobus species contain multiple hits to this subfamily and each may have a separate activity. Determining which is which must await further laboratory research.
Probab=96.77 E-value=0.014 Score=61.79 Aligned_cols=109 Identities=10% Similarity=0.013 Sum_probs=73.5
Q ss_pred cchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecC
Q 009044 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (546)
Q Consensus 93 ~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~ 172 (546)
.+.++||.++|+++|+++.++..... . .....|+++..++ ..+...|++.+++|.
T Consensus 21 ~~~a~~l~~~l~~~G~~~~~~~~~~~-------------------~----~~~~~~~~~~~~g--~~~~~~ill~~H~Dt 75 (375)
T TIGR01910 21 ETIANYIKDLLREFGFSTDVIEITDD-------------------R----LKVLGKVVVKEPG--NGNEKSLIFNGHYDV 75 (375)
T ss_pred HHHHHHHHHHHHHCCCceEEEecCch-------------------h----cccccceEEeccC--CCCCCEEEEeccccc
Confidence 36789999999999999876542110 0 0001245555543 223467999998876
Q ss_pred CC------------------------CCCcchhhHHHHHHHHHHHhcCC-CCCcceEEEeeCCCCCCchhHHHHHHhhc
Q 009044 173 VK------------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (546)
Q Consensus 173 ~~------------------------~~~~~~~gval~LaL~~yl~r~~-~waKDIIfl~~D~~~g~~~G~~AWL~~YH 226 (546)
.. |..++..+++.+++.++.+++.. -+.+||.|+|+-+++.+..|+++++++.+
T Consensus 76 Vp~~~~~~w~~~Pf~~~~~~g~i~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~G~~~~~~~~~ 154 (375)
T TIGR01910 76 VPAGDLELWKTDPFKPVEKDGKLYGRGATDMKGGLVALLYALKAIREAGIKPNGNIILQSVVDEESGEAGTLYLLQRGY 154 (375)
T ss_pred ccCCChhhCcCCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEEEEcCcccCchhHHHHHHcCC
Confidence 42 12344568888888888887654 46899999997666655679999998743
No 18
>PRK08652 acetylornithine deacetylase; Provisional
Probab=96.76 E-value=0.016 Score=60.29 Aligned_cols=115 Identities=17% Similarity=0.167 Sum_probs=78.3
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEE
Q 009044 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIl 153 (546)
+.++.++|-+....+.++ .+..+||.++|+++|+++..+.. . ...|+++
T Consensus 4 ~~~~~~~lv~ips~s~~e-~~~~~~l~~~l~~~G~~v~~~~~---------------------------~-~~~~~~~-- 52 (347)
T PRK08652 4 AKELLKQLVKIPSPSGQE-DEIALHIMEFLESLGYDVHIESD---------------------------G-EVINIVV-- 52 (347)
T ss_pred HHHHHHHHhcCCCCCCch-HHHHHHHHHHHHHcCCEEEEEec---------------------------C-ceeEEEc--
Confidence 456667777776655443 36789999999999999765420 0 0134443
Q ss_pred eCCCCCCceEEEEEEeecCC---------------CCCCcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchhH
Q 009044 154 RAPRGDGKEAIVLVTPYNAV---------------KGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPV 218 (546)
Q Consensus 154 rAPRgdgtEAIVL~ap~~~~---------------~~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~ 218 (546)
+ +...|++.+++|.. .|..+...+++.+++.++.|++. .-..||+|+|+-+++.+..|+
T Consensus 53 ----~-~~~~i~l~~H~D~vp~~~~~~~~~g~iyGrG~~D~Kg~~a~~l~a~~~l~~~-~~~~~v~~~~~~dEE~g~~G~ 126 (347)
T PRK08652 53 ----N-SKAELFVEVHYDTVPVRAEFFVDGVYVYGTGACDAKGGVAAILLALEELGKE-FEDLNVGIAFVSDEEEGGRGS 126 (347)
T ss_pred ----C-CCCEEEEEccccccCCCCCCEEECCEEEeccchhhhHHHHHHHHHHHHHhhc-ccCCCEEEEEecCcccCChhH
Confidence 2 23479999988764 23345567889889888888744 234599999975555455799
Q ss_pred HHHHHhh
Q 009044 219 AAWLRDY 225 (546)
Q Consensus 219 ~AWL~~Y 225 (546)
+++++++
T Consensus 127 ~~~~~~~ 133 (347)
T PRK08652 127 ALFAERY 133 (347)
T ss_pred HHHHHhc
Confidence 9999875
No 19
>PRK07906 hypothetical protein; Provisional
Probab=96.71 E-value=0.016 Score=62.46 Aligned_cols=122 Identities=14% Similarity=0.153 Sum_probs=80.5
Q ss_pred HHHHHHHhhhcCCC-----CCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEE
Q 009044 76 KLIKELNNLHSNPL-----GATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (546)
Q Consensus 76 ~y~~el~~~~~~~~-----~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~Nvy 150 (546)
++.++|-+.++-+. +...+..+||.++|+++|+++..++-. ....|++
T Consensus 3 ~ll~~Lv~i~S~s~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~---------------------------~~~~nv~ 55 (426)
T PRK07906 3 DLCSELIRIDTTNTGDGTGKGEREAAEYVAEKLAEVGLEPTYLESA---------------------------PGRANVV 55 (426)
T ss_pred HHHHHHhcccccCCCCCCCchHHHHHHHHHHHHHhCCCCeEEeecC---------------------------CCceEEE
Confidence 34455555554331 223367899999999999997765310 1236899
Q ss_pred EEEeCCCCCCceEEEEEEeecCCCC-----------------------CCcchhhHHHHHHHHHHHhcCC-CCCcceEEE
Q 009044 151 GIIRAPRGDGKEAIVLVTPYNAVKG-----------------------GVRETLSLGIAYSVFSLLTRVT-WLAKDIIWL 206 (546)
Q Consensus 151 gIlrAPRgdgtEAIVL~ap~~~~~~-----------------------~~~~~~gval~LaL~~yl~r~~-~waKDIIfl 206 (546)
+.+++. ..+...++|.+|+|.... ..|...+++.+++.++++++.. -+.++|.|+
T Consensus 56 ~~~~g~-~~~~~~lll~~H~DtVp~~~~~W~~~Pf~~~~~dg~iyGrG~~D~Kg~~a~~l~a~~~l~~~~~~~~~~i~~~ 134 (426)
T PRK07906 56 ARLPGA-DPSRPALLVHGHLDVVPAEAADWSVHPFSGEIRDGYVWGRGAVDMKDMDAMMLAVVRHLARTGRRPPRDLVFA 134 (426)
T ss_pred EEEeCC-CCCCCcEEEEcccccCCCCcccCccCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcCCCCCccEEEE
Confidence 998652 123467999888865421 1233568999999999887654 456799999
Q ss_pred ee-CCCCCCchhHHHHHHhh
Q 009044 207 VA-DSQYGEYAPVAAWLRDY 225 (546)
Q Consensus 207 ~~-D~~~g~~~G~~AWL~~Y 225 (546)
++ |.+.++..|++..++++
T Consensus 135 ~~~dEE~g~~~g~~~l~~~~ 154 (426)
T PRK07906 135 FVADEEAGGTYGAHWLVDNH 154 (426)
T ss_pred EecCcccchhhhHHHHHHHH
Confidence 96 44433456888888764
No 20
>TIGR01882 peptidase-T peptidase T. This model represents a tripeptide aminopeptidase known as Peptidase T, which has a substrate preference for hydrophobic peptides.
Probab=96.68 E-value=0.059 Score=58.16 Aligned_cols=100 Identities=7% Similarity=-0.004 Sum_probs=71.2
Q ss_pred chHHHHHHHHHhcCCc-eeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecC
Q 009044 94 ESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (546)
Q Consensus 94 ~~~~~I~~~l~~lGle-~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~ 172 (546)
+++++|.++|+++|++ ++... .--||+|.+++..+++...|++++|.|+
T Consensus 34 ~~a~~l~~~l~~lG~~~v~~d~------------------------------~~gnv~~~~~~~~~~~~~~i~~~aHmDT 83 (410)
T TIGR01882 34 TFGNMLVDDLKSLGLQDAHYDE------------------------------KNGYVIATIPSNTDKDVPTIGFLAHVDT 83 (410)
T ss_pred HHHHHHHHHHHHcCCceEEEcC------------------------------CceEEEEEecCCCCCCCCEEEEEEeccc
Confidence 6889999999999996 65321 1248999997754433589999999887
Q ss_pred CCC----------------------------------------------C-------CcchhhHHHHHHHHHHHhcC-CC
Q 009044 173 VKG----------------------------------------------G-------VRETLSLGIAYSVFSLLTRV-TW 198 (546)
Q Consensus 173 ~~~----------------------------------------------~-------~~~~~gval~LaL~~yl~r~-~~ 198 (546)
... . .|...|+|.++..++.|++. .-
T Consensus 84 v~~~~~~v~p~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~g~~l~G~D~KgglAa~l~A~~~L~e~~~~ 163 (410)
T TIGR01882 84 ADFNGENVNPQIIENYDGESIIQLGDLEFTLDPDQFPNLSGYKGQTLITTDGTTLLGADDKAGIAEIMTAADYLINHPEI 163 (410)
T ss_pred CcCCCCCCCCEEEecCCCceeeecCCCCeEEChHhChhHHhccCceEEEcCCCEeecccCHHHHHHHHHHHHHHHhCCCC
Confidence 431 0 12356899999999999764 33
Q ss_pred CCcceEEEeeCCCCCCchhHHHHHHh
Q 009044 199 LAKDIIWLVADSQYGEYAPVAAWLRD 224 (546)
Q Consensus 199 waKDIIfl~~D~~~g~~~G~~AWL~~ 224 (546)
+..+|.|+|+=+++.+ .|++.++.+
T Consensus 164 ~~g~I~~~ft~dEE~g-~Ga~~l~~~ 188 (410)
T TIGR01882 164 KHGTIRVAFTPDEEIG-RGAHKFDVK 188 (410)
T ss_pred CCCCEEEEEECcccCC-cCcchhhhh
Confidence 4679999997555544 477776543
No 21
>PRK12893 allantoate amidohydrolase; Reviewed
Probab=96.67 E-value=0.022 Score=61.10 Aligned_cols=121 Identities=14% Similarity=0.152 Sum_probs=80.9
Q ss_pred HHHHHHHHHHhhhcCCCC-C--------ccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccc
Q 009044 73 EANKLIKELNNLHSNPLG-A--------TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRS 143 (546)
Q Consensus 73 ~a~~y~~el~~~~~~~~~-~--------~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~ 143 (546)
.+.++.++|-+....+.. . .....+||.++|+++|+++..+.
T Consensus 11 ~~~~~l~~l~~i~s~~~~~~~~~~~s~~e~~~~~~l~~~l~~~G~~~~~~~----------------------------- 61 (412)
T PRK12893 11 RLWDSLMALARIGATPGGGVTRLALTDEDREARDLLAQWMEEAGLTVSVDA----------------------------- 61 (412)
T ss_pred HHHHHHHHHhcccCCCCCcEEeccCCHHHHHHHHHHHHHHHHcCCEEEEcC-----------------------------
Confidence 345556666665532211 1 12457999999999999876421
Q ss_pred cccceEEEEEeCCCCCCceEEEEEEeecCCC--CCCcchhhHHHHHHHHHHHhcCCC-CCcceEEEeeCCCCCC-----c
Q 009044 144 LYGINTVGIIRAPRGDGKEAIVLVTPYNAVK--GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGE-----Y 215 (546)
Q Consensus 144 ~~G~NvygIlrAPRgdgtEAIVL~ap~~~~~--~~~~~~~gval~LaL~~yl~r~~~-waKDIIfl~~D~~~g~-----~ 215 (546)
..|+++.+++.. .+...++|..|+|... +..+...|++.+|..++.|++... +.+||+|+++-+++.+ .
T Consensus 62 --~~n~~a~~~g~~-~~~~~l~l~~H~DtVp~~g~~dgk~gvaa~l~a~~~l~~~~~~~~~~v~~~~~~dEE~g~~~~~~ 138 (412)
T PRK12893 62 --IGNLFGRRAGTD-PDAPPVLIGSHLDTQPTGGRFDGALGVLAALEVVRTLNDAGIRTRRPIEVVSWTNEEGARFAPAM 138 (412)
T ss_pred --CCcEEEEeCCCC-CCCCEEEEEecccCCCCCCcccchhhHHHHHHHHHHHHHcCCCCCCCeEEEEEcccccccccccc
Confidence 128999996521 1246799999999852 222345789999999999987654 6889999997544442 5
Q ss_pred hhHHHHHHhh
Q 009044 216 APVAAWLRDY 225 (546)
Q Consensus 216 ~G~~AWL~~Y 225 (546)
.|...+.+++
T Consensus 139 ~G~~~~~~~~ 148 (412)
T PRK12893 139 LGSGVFTGAL 148 (412)
T ss_pred ccHHHHhCcC
Confidence 6777777553
No 22
>PRK09290 allantoate amidohydrolase; Reviewed
Probab=96.65 E-value=0.018 Score=62.04 Aligned_cols=100 Identities=13% Similarity=0.134 Sum_probs=71.9
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecCC
Q 009044 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (546)
Q Consensus 94 ~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~~ 173 (546)
...+||.++|+++|+++..+. ..|+++.+++. +.+...++|..|+|..
T Consensus 38 ~~a~~l~~~l~~~g~~~~~~~-------------------------------~~nl~a~~~g~-~~~~~~l~l~gH~DtV 85 (413)
T PRK09290 38 QARDLFAEWMEAAGLTVRVDA-------------------------------VGNLFGRLEGR-DPDAPAVLTGSHLDTV 85 (413)
T ss_pred HHHHHHHHHHHHcCCEEEEcC-------------------------------CCcEEEEecCC-CCCCCEEEEecCccCC
Confidence 467999999999999876421 13899999642 1123579999999985
Q ss_pred C--CCCcchhhHHHHHHHHHHHhcCCC-CCcceEEEeeCCCCC-----CchhHHHHHHhh
Q 009044 174 K--GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYG-----EYAPVAAWLRDY 225 (546)
Q Consensus 174 ~--~~~~~~~gval~LaL~~yl~r~~~-waKDIIfl~~D~~~g-----~~~G~~AWL~~Y 225 (546)
. +..+...|++.+++.++.+++... +.+||+|+++-+++. +..|.+.+++.|
T Consensus 86 p~~g~~d~k~g~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~G~~~~~~~~ 145 (413)
T PRK09290 86 PNGGRFDGPLGVLAGLEAVRTLNERGIRPRRPIEVVAFTNEEGSRFGPAMLGSRVFTGAL 145 (413)
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHcCCCCCCCeEEEEEcCCccccccCccccHHHHHccc
Confidence 3 223446789999988888876543 578999999754544 456888887553
No 23
>PRK12892 allantoate amidohydrolase; Reviewed
Probab=96.60 E-value=0.016 Score=62.02 Aligned_cols=99 Identities=12% Similarity=0.077 Sum_probs=72.3
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecCC
Q 009044 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (546)
Q Consensus 94 ~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~~ 173 (546)
..++||.++|+++|+++.... -.|+++.+++.. ++ -.+++..|.|..
T Consensus 40 ~~~~~l~~~l~~~G~~~~~~~-------------------------------~~nl~a~~~g~~-~~-~~l~l~gH~DtV 86 (412)
T PRK12892 40 AARRRLAAWCEAAGLAVRIDG-------------------------------IGNVFGRLPGPG-PG-PALLVGSHLDSQ 86 (412)
T ss_pred HHHHHHHHHHHHcCCEEEEcC-------------------------------CCcEEEEecCCC-CC-CeEEEEccccCC
Confidence 567999999999999876421 129999997632 22 579999999985
Q ss_pred CC--CCcchhhHHHHHHHHHHHhcCC-CCCcceEEEeeCCCCC-----CchhHHHHHHhh
Q 009044 174 KG--GVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYG-----EYAPVAAWLRDY 225 (546)
Q Consensus 174 ~~--~~~~~~gval~LaL~~yl~r~~-~waKDIIfl~~D~~~g-----~~~G~~AWL~~Y 225 (546)
.. -.+...|++.+++.++.+++.. -+.+||+|+++=++|+ +..|.+++++++
T Consensus 87 p~~g~~dg~~Gvaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~~~~~~~~Gs~~~~~~~ 146 (412)
T PRK12892 87 NLGGRYDGALGVVAGLEAARALNEHGIATRHPLDVVAWCDEEGSRFTPGFLGSRAYAGRL 146 (412)
T ss_pred CCCCcccchHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCcccccccCccccHHHHHcCC
Confidence 32 1233568999999999888654 4689999999744444 457999998653
No 24
>PRK06446 hypothetical protein; Provisional
Probab=96.55 E-value=0.036 Score=60.27 Aligned_cols=122 Identities=13% Similarity=0.107 Sum_probs=81.0
Q ss_pred HHHHHHHHHhhhcCCCCCc--cchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEE
Q 009044 74 ANKLIKELNNLHSNPLGAT--TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~--~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~Nvyg 151 (546)
+..+.++|-+..+.+.+.. .+..+||.++|+++|+++..++. ..+.|+++
T Consensus 4 ~~~~l~eLV~i~S~s~~~~~~~~~a~~l~~~l~~~G~~ve~~~~----------------------------~~~~~lia 55 (436)
T PRK06446 4 ELYTLIEFLKKPSISATGEGIEETANYLKDTMEKLGIKANIERT----------------------------KGHPVVYG 55 (436)
T ss_pred HHHHHHHHhCCCCCCCCcHhHHHHHHHHHHHHHHCCCeEEEEec----------------------------CCCCEEEE
Confidence 3445556666655443211 36789999999999999876541 01368999
Q ss_pred EEeCCCCCCceEEEEEEeecCCC------------------------CCCcchhhHHHHHHHHHHHhcCCCCCcceEEEe
Q 009044 152 IIRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLV 207 (546)
Q Consensus 152 IlrAPRgdgtEAIVL~ap~~~~~------------------------~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~ 207 (546)
.+.. ++...+++..|+|... |..|...+++.++..++.+.+..-...+|.|+|
T Consensus 56 ~~~~---~~~~~vll~gH~DvVp~~~~~~W~~~Pf~~~~~dg~lyGRGa~DmKgglaa~l~A~~~l~~~~~~~~~i~~~~ 132 (436)
T PRK06446 56 EINV---GAKKTLLIYNHYDVQPVDPLSEWKRDPFSATIENGRIYARGASDNKGTLMARLFAIKHLIDKHKLNVNVKFLY 132 (436)
T ss_pred EecC---CCCCEEEEEecccCCCCCccccccCCCCceEEECCEEEEEeccCCcHHHHHHHHHHHHHHHcCCCCCCEEEEE
Confidence 8753 2235799998887621 122446788888877766654344678999999
Q ss_pred eCCCCCCchhHHHHHHhhc
Q 009044 208 ADSQYGEYAPVAAWLRDYH 226 (546)
Q Consensus 208 ~D~~~g~~~G~~AWL~~YH 226 (546)
+-+++.+..|++++++++.
T Consensus 133 ~~dEE~g~~g~~~~l~~~~ 151 (436)
T PRK06446 133 EGEEEIGSPNLEDFIEKNK 151 (436)
T ss_pred EcccccCCHhHHHHHHHHH
Confidence 7444445679999998853
No 25
>PRK07473 carboxypeptidase; Provisional
Probab=96.55 E-value=0.037 Score=59.07 Aligned_cols=126 Identities=14% Similarity=0.095 Sum_probs=82.3
Q ss_pred HHHHHHHHHhhhcCCCCCc--cchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEE
Q 009044 74 ANKLIKELNNLHSNPLGAT--TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~--~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~Nvyg 151 (546)
..++.++|-+..+.+.+.. ....+|+.++|+++|+++..+... ...+.|+++
T Consensus 13 ~~~~l~~Lv~i~S~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~--------------------------~~~~~~~~~ 66 (376)
T PRK07473 13 MLAGLRPWVECESPTWDAAAVNRMLDLAARDMAIMGATIERIPGR--------------------------QGFGDCVRA 66 (376)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEecCC--------------------------CCCCCeEEE
Confidence 3455555655555443311 134579999999999998765310 112458888
Q ss_pred EEeCCCCCCceEEEEEEeecCCC--------------------CCCcchhhHHHHHHHHHHHhcCCC-CCcceEEEeeCC
Q 009044 152 IIRAPRGDGKEAIVLVTPYNAVK--------------------GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADS 210 (546)
Q Consensus 152 IlrAPRgdgtEAIVL~ap~~~~~--------------------~~~~~~~gval~LaL~~yl~r~~~-waKDIIfl~~D~ 210 (546)
.++++.. +...++|..|+|... |..|...+++.++..++.+++... ...+|.|+++-+
T Consensus 67 ~~~~~~~-~~~~lll~gH~DtV~~~~~~~~~p~~~~~g~lyGrG~~D~Kgglaa~l~A~~~l~~~~~~~~~~v~~~~~~d 145 (376)
T PRK07473 67 RFPHPRQ-GEPGILIAGHMDTVHPVGTLEKLPWRREGNKCYGPGILDMKGGNYLALEAIRQLARAGITTPLPITVLFTPD 145 (376)
T ss_pred EeCCCCC-CCCeEEEEecCCCCCCCCCccCCCeEEECCEEEcCchhhchHHHHHHHHHHHHHHHcCCCCCCCEEEEEeCC
Confidence 8865322 335699999988541 112345789998888888876542 356899999755
Q ss_pred CCCCchhHHHHHHhhc
Q 009044 211 QYGEYAPVAAWLRDYH 226 (546)
Q Consensus 211 ~~g~~~G~~AWL~~YH 226 (546)
++.+..|++.+++++.
T Consensus 146 EE~g~~g~~~~~~~~~ 161 (376)
T PRK07473 146 EEVGTPSTRDLIEAEA 161 (376)
T ss_pred cccCCccHHHHHHHhh
Confidence 5556679999999864
No 26
>PRK07907 hypothetical protein; Provisional
Probab=96.48 E-value=0.047 Score=59.56 Aligned_cols=121 Identities=13% Similarity=0.141 Sum_probs=80.6
Q ss_pred HHHHHHHHHHhhhcCCCC-----CccchHHHHHHHHHhcCC-ceeeeecccCCCcCCCcccccCCCCCccccCCcccccc
Q 009044 73 EANKLIKELNNLHSNPLG-----ATTESHGIIAKYMSNLGA-QVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYG 146 (546)
Q Consensus 73 ~a~~y~~el~~~~~~~~~-----~~~~~~~~I~~~l~~lGl-e~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G 146 (546)
.+.++.++|-+....+.+ .....++||.++|+++|+ ++..++ .. ..
T Consensus 19 ~~~~ll~~LV~ipS~s~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~--~~--------------------------~~ 70 (449)
T PRK07907 19 RVRADLEELVRIPSVAADPFRREEVARSAEWVADLLREAGFDDVRVVS--AD--------------------------GA 70 (449)
T ss_pred HHHHHHHHHhcCCCCCCCccchhhHHHHHHHHHHHHHHcCCceEEEEe--cC--------------------------CC
Confidence 344555555555554422 123578999999999997 666553 00 12
Q ss_pred ceEEEEEeCCCCCCceEEEEEEeecCCC------------------------CCCcchhhHHHHHHHHHHHhcCCCCCcc
Q 009044 147 INTVGIIRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVTWLAKD 202 (546)
Q Consensus 147 ~NvygIlrAPRgdgtEAIVL~ap~~~~~------------------------~~~~~~~gval~LaL~~yl~r~~~waKD 202 (546)
.|+++.+++ +++...+++..|+|... |..|...+++.++..++.+ ... ...+
T Consensus 71 ~nl~a~~~~--~~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l-~~~-~~~~ 146 (449)
T PRK07907 71 PAVIGTRPA--PPGAPTVLLYAHHDVQPPGDPDAWDSPPFELTERDGRLYGRGAADDKGGIAMHLAALRAL-GGD-LPVG 146 (449)
T ss_pred CEEEEEecC--CCCCCEEEEEcccCCCCCCCccccCCCCceeEEECCEEEECCccCCcHHHHHHHHHHHHh-ccC-CCCc
Confidence 589998865 33457899988886531 2234467888888888877 333 3678
Q ss_pred eEEEeeCCCCCCchhHHHHHHhh
Q 009044 203 IIWLVADSQYGEYAPVAAWLRDY 225 (546)
Q Consensus 203 IIfl~~D~~~g~~~G~~AWL~~Y 225 (546)
|.|+++..++.+..|++++++++
T Consensus 147 i~~~~~~dEE~g~~g~~~~l~~~ 169 (449)
T PRK07907 147 VTVFVEGEEEMGSPSLERLLAEH 169 (449)
T ss_pred EEEEEEcCcccCCccHHHHHHhc
Confidence 99999755555567999999985
No 27
>PRK13013 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=96.41 E-value=0.067 Score=57.55 Aligned_cols=129 Identities=15% Similarity=0.088 Sum_probs=78.8
Q ss_pred HHHHHHHHHHhhhcCC--CCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEE
Q 009044 73 EANKLIKELNNLHSNP--LGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (546)
Q Consensus 73 ~a~~y~~el~~~~~~~--~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~Nvy 150 (546)
++.++.++|-+..+.+ +.+..+..+||.++|+++|+++..+..... | .+ .+ ...+.|++
T Consensus 15 ~~~~~l~~Lv~i~S~~~~g~~e~~~~~~l~~~l~~~G~~~~~~~~~~~-----~--------~~---~~---~~~~~nli 75 (427)
T PRK13013 15 DLVALTQDLIRIPTLNPPGRAYREICEFLAARLAPRGFEVELIRAEGA-----P--------GD---SE---TYPRWNLV 75 (427)
T ss_pred HHHHHHHHHhcCCCcCCCCccHHHHHHHHHHHHHHCCCceEEEecCCC-----C--------cc---cc---cCCcceEE
Confidence 3455556665554432 122236789999999999999876642110 0 00 00 12357999
Q ss_pred EEEeCCCCCCceEEEEEEeecCCC----------------------CCCcchhhHHHHHHHHHHHhcCC-CCCcceEEEe
Q 009044 151 GIIRAPRGDGKEAIVLVTPYNAVK----------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLV 207 (546)
Q Consensus 151 gIlrAPRgdgtEAIVL~ap~~~~~----------------------~~~~~~~gval~LaL~~yl~r~~-~waKDIIfl~ 207 (546)
|.+++. ++...|++.+|+|... |..+...+++.++..++.|++.. -+.+||+|++
T Consensus 76 a~~~g~--~~~~~i~l~gH~DvVp~~~~W~~~Pf~~~~~dg~iyGrGa~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~ 153 (427)
T PRK13013 76 ARRQGA--RDGDCVHFNSHHDVVEVGHGWTRDPFGGEVKDGRIYGRGACDMKGGLAASIIAAEAFLAVYPDFAGSIEISG 153 (427)
T ss_pred EEecCC--CCCCEEEEEeccccCCCCCCCcCCCCCceEECCEEEeccccccchHHHHHHHHHHHHHHhCCCCCccEEEEE
Confidence 999652 3345799999887531 12233568888888889887754 3578999999
Q ss_pred eCCCC-CCchhHHHHH
Q 009044 208 ADSQY-GEYAPVAAWL 222 (546)
Q Consensus 208 ~D~~~-g~~~G~~AWL 222 (546)
+-+++ |+..|.+..+
T Consensus 154 ~~dEE~g~~~g~~~l~ 169 (427)
T PRK13013 154 TADEESGGFGGVAYLA 169 (427)
T ss_pred EeccccCChhHHHHHH
Confidence 64444 3333444444
No 28
>PRK13381 peptidase T; Provisional
Probab=96.41 E-value=0.032 Score=59.86 Aligned_cols=101 Identities=13% Similarity=0.083 Sum_probs=70.0
Q ss_pred cchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecC
Q 009044 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (546)
Q Consensus 93 ~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~ 172 (546)
.+.++||.++|+++|+++.... .--||+|.+++. +++...|++..|+|.
T Consensus 31 ~~~~~~l~~~l~~~G~~~~~~~------------------------------~~~nvi~~~~g~-~~~~~~lll~~H~D~ 79 (404)
T PRK13381 31 HELAKLLADELRELGLEDIVID------------------------------EHAIVTAKLPGN-TPGAPRIGFIAHLDT 79 (404)
T ss_pred HHHHHHHHHHHHHcCCCcEEEc------------------------------CCeEEEEEEecC-CCCCCeEEEEEEecC
Confidence 3578999999999999643210 012999998652 223378999998876
Q ss_pred CC-------------------------------------------------CC----CcchhhHHHHHHHHHHHhcCCCC
Q 009044 173 VK-------------------------------------------------GG----VRETLSLGIAYSVFSLLTRVTWL 199 (546)
Q Consensus 173 ~~-------------------------------------------------~~----~~~~~gval~LaL~~yl~r~~~w 199 (546)
.- |. .|...|++.++..++.+++..-.
T Consensus 80 Vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GrG~~~~g~DmKgg~aa~l~a~~~l~~~~~~ 159 (404)
T PRK13381 80 VDVGLSPDIHPQILRFDGGDLCLNAEQGIWLRTAEHPELLNYQGEDIIFSDGTSVLGADNKAAIAVVMTLLENLTENEVE 159 (404)
T ss_pred CCccCCCCcCcEEEecCCCceecCCccceeechHhChhHHhccCCcEEeCCCccccccccHHHHHHHHHHHHHHHhcCCC
Confidence 41 11 34455678888888887665445
Q ss_pred CcceEEEeeCCCCCCchhHHHHHHh
Q 009044 200 AKDIIWLVADSQYGEYAPVAAWLRD 224 (546)
Q Consensus 200 aKDIIfl~~D~~~g~~~G~~AWL~~ 224 (546)
..||+|+|+-+++.+..|+++++.+
T Consensus 160 ~g~i~~~~~~dEE~g~~G~~~~~~~ 184 (404)
T PRK13381 160 HGDIVVAFVPDEEIGLRGAKALDLA 184 (404)
T ss_pred CCCEEEEEEcccccccccHHHHHHh
Confidence 6699999975555556799999765
No 29
>TIGR01893 aa-his-dipept aminoacyl-histidine dipeptidase.
Probab=96.36 E-value=0.035 Score=61.17 Aligned_cols=117 Identities=13% Similarity=0.145 Sum_probs=78.2
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEE
Q 009044 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIl 153 (546)
+.++.++|-+..+.+ +...+.++||.++|+++|+++.... ..|+++.+
T Consensus 6 ~~~~l~~l~~i~s~s-~~e~~~~~~l~~~l~~~G~~~~~~~-------------------------------~~n~~~~~ 53 (477)
T TIGR01893 6 VFKYFEEISKIPRPS-KNEKEVSNFIVNWAKKLGLEVKQDE-------------------------------VGNVLIRK 53 (477)
T ss_pred HHHHHHHHHcCCCCC-ccHHHHHHHHHHHHHHcCCeEEEeC-------------------------------CCeEEEEE
Confidence 445556666655433 3345788999999999999866431 13899998
Q ss_pred eCCCC-CCceEEEEEEeecCCCCC------------------------------CcchhhHHHHHHHHHHHhcCCCCCcc
Q 009044 154 RAPRG-DGKEAIVLVTPYNAVKGG------------------------------VRETLSLGIAYSVFSLLTRVTWLAKD 202 (546)
Q Consensus 154 rAPRg-dgtEAIVL~ap~~~~~~~------------------------------~~~~~gval~LaL~~yl~r~~~waKD 202 (546)
.+..+ .+...+++..|.|....+ .|...|++.+++.++. .....++
T Consensus 54 ~~~~g~~~~~~l~l~~HlDtV~~~~~~~~~~w~~~p~~~~~~~~~i~GrG~~lg~D~k~gva~~l~~~~~---~~~~~~~ 130 (477)
T TIGR01893 54 PATPGYENHPPIVLQGHMDMVCEKNEDSLHDFEKDPIELIIDGDWLKARGTTLGADNGIGVAMGLAILED---NNLKHPP 130 (477)
T ss_pred cCCCCCCCCCeEEEEeeccccCCCCCCCCCCCCCCCeEEEEeCCEEEECCccccccccHHHHHHHHHHhc---CCCCCCC
Confidence 77444 244679999998864211 1446677777776653 3334679
Q ss_pred eEEEeeCCCCCCchhHHHHHHhh
Q 009044 203 IIWLVADSQYGEYAPVAAWLRDY 225 (546)
Q Consensus 203 IIfl~~D~~~g~~~G~~AWL~~Y 225 (546)
|.++|+-+++.+..|++++..+.
T Consensus 131 i~~~~~~dEE~g~~Gs~~l~~~~ 153 (477)
T TIGR01893 131 LELLFTVDEETGMDGALGLDENW 153 (477)
T ss_pred EEEEEEeccccCchhhhhcChhh
Confidence 99999755556677899887654
No 30
>PRK08262 hypothetical protein; Provisional
Probab=96.33 E-value=0.07 Score=58.78 Aligned_cols=141 Identities=13% Similarity=0.071 Sum_probs=87.8
Q ss_pred cccccccccCCCcceeeeccchhhHHHHHHHHHHHhhhcCCCCCcc--------chHHHHHHHHHhcCCceeeeecccCC
Q 009044 48 KNTYISENALMPGSASSMLSNQEVSEANKLIKELNNLHSNPLGATT--------ESHGIIAKYMSNLGAQVNNHKFHPQL 119 (546)
Q Consensus 48 r~TYISENALlPg~v~~~f~~~~~~~a~~y~~el~~~~~~~~~~~~--------~~~~~I~~~l~~lGle~~~q~f~~~~ 119 (546)
+..-||--|.-|-- .+. ....++.+++-+..+.+.+... ...+|+.++|+++|+++..+..
T Consensus 27 ~~~~~~~~~~~~~~----~~~---~~~v~~L~~lv~i~S~s~~~~~~~~~~~~~~~~~~L~~~~~~~g~~~~~~~~---- 95 (486)
T PRK08262 27 KSRQIDVPAVAPVA----VDE---DAAAERLSEAIRFRTISNRDRAEDDAAAFDALHAHLEESYPAVHAALEREVV---- 95 (486)
T ss_pred ccCCCCccccCCCc----CCH---HHHHHHHHHhcccceeccCCCCcccHHHHHHHHHHHHHhChhhhceeEEEEE----
Confidence 33446766766632 222 2355666666666655443211 2678888888888987665531
Q ss_pred CcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecCCC-------------------------
Q 009044 120 NQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVK------------------------- 174 (546)
Q Consensus 120 ~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~~~------------------------- 174 (546)
.|.|+++.++++ +.+...|++.+|+|...
T Consensus 96 -------------------------~~~~vv~~~~g~-~~~~~~ill~gH~DvVp~~~~~~~~W~~~Pf~~~~~dg~lyG 149 (486)
T PRK08262 96 -------------------------GGHSLLYTWKGS-DPSLKPIVLMAHQDVVPVAPGTEGDWTHPPFSGVIADGYVWG 149 (486)
T ss_pred -------------------------CCccEEEEEECC-CCCCCeEEEECcccccCCCCCCcccCccCCCceEeeCCEEEe
Confidence 235777777653 12336799988876531
Q ss_pred -CCCcchhhHHHHHHHHHHHhcCC-CCCcceEEEeeCCCCCCchhHHHHHHhh
Q 009044 175 -GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (546)
Q Consensus 175 -~~~~~~~gval~LaL~~yl~r~~-~waKDIIfl~~D~~~g~~~G~~AWL~~Y 225 (546)
|..|...+++.++..++.+++.. -+.++|.|+|.-+++.+..|++.+++.+
T Consensus 150 RG~~D~Kg~~aa~L~A~~~l~~~~~~l~~~I~llf~~dEE~g~~G~~~l~~~l 202 (486)
T PRK08262 150 RGALDDKGSLVAILEAAEALLAQGFQPRRTIYLAFGHDEEVGGLGARAIAELL 202 (486)
T ss_pred cCccccchhHHHHHHHHHHHHHcCCCCCCeEEEEEecccccCCcCHHHHHHHH
Confidence 22234578888888888887654 4678999999744444445888877653
No 31
>PRK13009 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=96.27 E-value=0.068 Score=56.32 Aligned_cols=119 Identities=13% Similarity=0.042 Sum_probs=76.3
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEE
Q 009044 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIl 153 (546)
+.++.++|-+....+... ...++||.++|+++|+++..+.. . ...|+++.+
T Consensus 4 ~~~~l~~Lv~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~~--~--------------------------~~~n~~~~~ 54 (375)
T PRK13009 4 VLELAQDLIRRPSVTPDD-AGCQDLLAERLEALGFTCERMDF--G--------------------------DVKNLWARR 54 (375)
T ss_pred HHHHHHHHhCCCCCCCch-hhHHHHHHHHHHHcCCeEEEecc--C--------------------------CCcEEEEEe
Confidence 345556666655544332 35789999999999998765531 0 124888875
Q ss_pred eCCCCCCceEEEEEEeecCCCC------------------------CCcchhhHHHHHHHHHHHhc-CCCCCcceEEEee
Q 009044 154 RAPRGDGKEAIVLVTPYNAVKG------------------------GVRETLSLGIAYSVFSLLTR-VTWLAKDIIWLVA 208 (546)
Q Consensus 154 rAPRgdgtEAIVL~ap~~~~~~------------------------~~~~~~gval~LaL~~yl~r-~~~waKDIIfl~~ 208 (546)
+ .+...|++..|+|.... ..|...+++.++..++.+.+ ..-+.++|+|+++
T Consensus 55 -g---~~~~~i~l~~H~D~Vp~g~~~~w~~~Pf~~~~~~g~iyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~i~~~~~ 130 (375)
T PRK13009 55 -G---TEGPHLCFAGHTDVVPPGDLEAWTSPPFEPTIRDGMLYGRGAADMKGSLAAFVVAAERFVAAHPDHKGSIAFLIT 130 (375)
T ss_pred -c---CCCCEEEEEeecccCCCCCcccCCCCCCCcEEECCEEEecCCccChHHHHHHHHHHHHHHHhcCCCCceEEEEEE
Confidence 3 24467999999976421 11334477777766665543 3446789999997
Q ss_pred CCCCC-CchhHHHHHHhh
Q 009044 209 DSQYG-EYAPVAAWLRDY 225 (546)
Q Consensus 209 D~~~g-~~~G~~AWL~~Y 225 (546)
-+++. +..|++.+++.+
T Consensus 131 ~~EE~~~~~G~~~~~~~~ 148 (375)
T PRK13009 131 SDEEGPAINGTVKVLEWL 148 (375)
T ss_pred eecccccccCHHHHHHHH
Confidence 44443 345888887664
No 32
>PRK06915 acetylornithine deacetylase; Validated
Probab=96.24 E-value=0.072 Score=57.38 Aligned_cols=138 Identities=19% Similarity=0.189 Sum_probs=80.2
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEE
Q 009044 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIl 153 (546)
+.++.++|-+...-+.+. .+..++|+++|+++|+++..+.........+| .|... ..+ ...+.|++|.+
T Consensus 19 ~~~~l~~lv~ips~s~~e-~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~--~~~~~-----~~~---~~~~~nlia~~ 87 (422)
T PRK06915 19 AVKLLKRLIQEKSVSGDE-SGAQAIVIEKLRELGLDLDIWEPSFKKLKDHP--YFVSP-----RTS---FSDSPNIVATL 87 (422)
T ss_pred HHHHHHHHHhCCCCCcch-HHHHHHHHHHHHhcCCeeEEeecchhhhhccc--ccCCc-----ccc---cCCCceEEEEE
Confidence 445566666665544432 36789999999999999876653321100000 00000 000 11358999999
Q ss_pred eCCCCCCceEEEEEEeecCCC------------------------CCCcchhhHHHHHHHHHHHhcCCC-CCcceEEEee
Q 009044 154 RAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVA 208 (546)
Q Consensus 154 rAPRgdgtEAIVL~ap~~~~~------------------------~~~~~~~gval~LaL~~yl~r~~~-waKDIIfl~~ 208 (546)
++. +.+ ..|++.+++|..- |..|...+++.++..++.+++..+ +..+|+|+++
T Consensus 88 ~g~-~~~-~~l~l~~H~Dtvp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~aa~l~a~~~l~~~~~~~~~~v~~~~~ 165 (422)
T PRK06915 88 KGS-GGG-KSMILNGHIDVVPEGDVNQWDHHPYSGEVIGGRIYGRGTTDMKGGNVALLLAMEALIESGIELKGDVIFQSV 165 (422)
T ss_pred cCC-CCC-CeEEEEeeccccCCCCcccCcCCCCCceEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEe
Confidence 642 223 5799998886531 111334467777777888877653 5679999996
Q ss_pred CCCCCCchhHHHHHHh
Q 009044 209 DSQYGEYAPVAAWLRD 224 (546)
Q Consensus 209 D~~~g~~~G~~AWL~~ 224 (546)
=+++.+..|..+.+++
T Consensus 166 ~dEE~g~~G~~~~~~~ 181 (422)
T PRK06915 166 IEEESGGAGTLAAILR 181 (422)
T ss_pred cccccCCcchHHHHhc
Confidence 3344334576665544
No 33
>PRK06837 acetylornithine deacetylase; Provisional
Probab=96.18 E-value=0.083 Score=57.23 Aligned_cols=137 Identities=15% Similarity=0.130 Sum_probs=80.0
Q ss_pred HHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEe
Q 009044 75 NKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIR 154 (546)
Q Consensus 75 ~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlr 154 (546)
.++.++|-+...-+.+ ..+.++||.++|+++|+++......... ....+..+. .......+.|+++.++
T Consensus 23 ~~~l~~li~ipS~s~~-e~~~~~~l~~~l~~~G~~~~~~~~~~~~-------~~~~~~~~~---~~~~~~~~~nl~a~~~ 91 (427)
T PRK06837 23 VAFTQDLVRFPSTRGA-EAPCQDFLARAFRERGYEVDRWSIDPDD-------LKSHPGAGP---VEIDYSGAPNVVGTYR 91 (427)
T ss_pred HHHHHHHhccCCCCCc-HHHHHHHHHHHHHHCCCceEEecCCHHH-------hhhcccccc---cccccCCCceEEEEec
Confidence 3445555555554433 2367899999999999998765432110 000000000 0000124689999997
Q ss_pred CCCCCCceEEEEEEeecCCC------------------------CCCcchhhHHHHHHHHHHHhcCC-CCCcceEEEeeC
Q 009044 155 APRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVAD 209 (546)
Q Consensus 155 APRgdgtEAIVL~ap~~~~~------------------------~~~~~~~gval~LaL~~yl~r~~-~waKDIIfl~~D 209 (546)
+-.. +...|++..|+|... |..|...+++.++..++.+++.. -+..||+|+++-
T Consensus 92 g~~~-~~~~il~~gH~DvVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kgg~~a~l~a~~~l~~~~~~~~~~i~~~~~~ 170 (427)
T PRK06837 92 PAGK-TGRSLILQGHIDVVPEGPLDLWSRPPFDPVIVDGWMYGRGAADMKAGLAAMLFALDALRAAGLAPAARVHFQSVI 170 (427)
T ss_pred CCCC-CCCeEEEEeecccCCCCCccccccCCCCcEEECCEEEecCcccchHHHHHHHHHHHHHHHcCCCCCCcEEEEEEe
Confidence 5221 235799999997642 22244567888887788887654 367899999974
Q ss_pred CCCCCchhHHHHHH
Q 009044 210 SQYGEYAPVAAWLR 223 (546)
Q Consensus 210 ~~~g~~~G~~AWL~ 223 (546)
+++.+..|+..-+.
T Consensus 171 dEE~~g~g~~~~~~ 184 (427)
T PRK06837 171 EEESTGNGALSTLQ 184 (427)
T ss_pred ccccCCHhHHHHHh
Confidence 44433346554444
No 34
>PRK04443 acetyl-lysine deacetylase; Provisional
Probab=96.14 E-value=0.072 Score=55.98 Aligned_cols=115 Identities=18% Similarity=0.209 Sum_probs=77.8
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEE
Q 009044 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIl 153 (546)
+.++.++|-+....+.+ ..+.++||.++|+++|+++..+. ..|++|.+
T Consensus 8 ~~~~l~~Lv~i~s~s~~-e~~~~~~l~~~l~~~G~~~~~~~-------------------------------~~n~i~~~ 55 (348)
T PRK04443 8 ARELLKGLVEIPSPSGE-EAAAAEFLVEFMESHGREAWVDE-------------------------------AGNARGPA 55 (348)
T ss_pred HHHHHHHHHcCCCCCCC-hHHHHHHHHHHHHHcCCEEEEcC-------------------------------CCcEEEEc
Confidence 45566666666665543 33678999999999999875321 13777765
Q ss_pred eCCCCCCceEEEEEEeecCCC---------------CCCcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchhH
Q 009044 154 RAPRGDGKEAIVLVTPYNAVK---------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPV 218 (546)
Q Consensus 154 rAPRgdgtEAIVL~ap~~~~~---------------~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~ 218 (546)
+++...+++..|+|... |..|...+++.++..++.+ +. -+..||.|+++-+++.+..|.
T Consensus 56 ----~~~~~~l~~~~H~DtVp~~~p~~~~~g~iyGrG~~D~Kg~~aa~l~A~~~l-~~-~~~~~i~~~~~~dEE~g~~~~ 129 (348)
T PRK04443 56 ----GDGPPLVLLLGHIDTVPGDIPVRVEDGVLWGRGSVDAKGPLAAFAAAAARL-EA-LVRARVSFVGAVEEEAPSSGG 129 (348)
T ss_pred ----CCCCCEEEEEeeccccCCCCCcEeeCCeEEeecccccccHHHHHHHHHHHh-cc-cCCCCEEEEEEcccccCChhH
Confidence 23346899999998652 2234456788888888877 43 357899999975555555677
Q ss_pred HHHHHhhc
Q 009044 219 AAWLRDYH 226 (546)
Q Consensus 219 ~AWL~~YH 226 (546)
..++.+-.
T Consensus 130 ~~~l~~~~ 137 (348)
T PRK04443 130 ARLVADRE 137 (348)
T ss_pred HHHHHhcc
Confidence 77776643
No 35
>PRK07338 hypothetical protein; Provisional
Probab=96.10 E-value=0.13 Score=55.00 Aligned_cols=117 Identities=9% Similarity=0.025 Sum_probs=74.0
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecCC
Q 009044 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (546)
Q Consensus 94 ~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~~ 173 (546)
...+||.++|+++|+++..+...... ..+.+. . .. ....+.|+++.+++ ++...++|..|+|..
T Consensus 41 ~~~~~l~~~l~~~G~~~~~~~~~~~~-------~~~~~~-~---~~--~~~~~~nl~a~~~~---~~~~~lll~gH~DvV 104 (402)
T PRK07338 41 RMAELLADAFAALPGEIELIPLPPVE-------VIDADG-R---TL--EQAHGPALHVSVRP---EAPRQVLLTGHMDTV 104 (402)
T ss_pred HHHHHHHHHHHhCCCcEEEecCCccc-------cccccc-c---cc--ccCcCCeEEEEECC---CCCccEEEEeecCcc
Confidence 46789999999999998765421100 000000 0 00 01245799999843 223359999988754
Q ss_pred CC--------------------CCcchhhHHHHHHHHHHHhcCC-CCCcceEEEeeCCCCCCchhHHHHHHhhc
Q 009044 174 KG--------------------GVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (546)
Q Consensus 174 ~~--------------------~~~~~~gval~LaL~~yl~r~~-~waKDIIfl~~D~~~g~~~G~~AWL~~YH 226 (546)
-. ..|...+++.+++.++.|++.. -..++|.|+|+-+++.+..|.+.++++..
T Consensus 105 p~~~~Pf~~~~~~~~g~lyGrG~~DmKgg~aa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~~~~ 178 (402)
T PRK07338 105 FPADHPFQTLSWLDDGTLNGPGVADMKGGIVVMLAALLAFERSPLADKLGYDVLINPDEEIGSPASAPLLAELA 178 (402)
T ss_pred CCCCCcccCCeEeeCCEEECCcHHhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEECCcccCChhhHHHHHHHh
Confidence 11 1233567888888888887654 34679999997555555578999998854
No 36
>PRK13983 diaminopimelate aminotransferase; Provisional
Probab=96.09 E-value=0.1 Score=55.30 Aligned_cols=130 Identities=13% Similarity=0.099 Sum_probs=82.3
Q ss_pred HHHHHHHHHHhhhcCCC----CCccchHHHHHHHHHhcCCc-eeeeecccCCCcCCCcccccCCCCCccccCCccccccc
Q 009044 73 EANKLIKELNNLHSNPL----GATTESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGI 147 (546)
Q Consensus 73 ~a~~y~~el~~~~~~~~----~~~~~~~~~I~~~l~~lGle-~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~ 147 (546)
.+.++.++|-+....+. ++.....+||.++|+++|++ +..+..... + + . ...+.
T Consensus 6 ~~~~~l~~lv~i~s~s~~~~~~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~---------------~----~-~-~~~~~ 64 (400)
T PRK13983 6 EMIELLSELIAIPAVNPDFGGEGEKEKAEYLESLLKEYGFDEVERYDAPDP---------------R----V-I-EGVRP 64 (400)
T ss_pred HHHHHHHHHhCcCCCCCCCCCccHHHHHHHHHHHHHHcCCceEEEEecCCc---------------c----c-c-cCCCc
Confidence 34556666666555432 11235679999999999998 665542110 0 0 0 00147
Q ss_pred eEEEEEeCCCCCCceEEEEEEeecCCCC------------------------CCcchhhHHHHHHHHHHHhcCC-CCCcc
Q 009044 148 NTVGIIRAPRGDGKEAIVLVTPYNAVKG------------------------GVRETLSLGIAYSVFSLLTRVT-WLAKD 202 (546)
Q Consensus 148 NvygIlrAPRgdgtEAIVL~ap~~~~~~------------------------~~~~~~gval~LaL~~yl~r~~-~waKD 202 (546)
|+++.+++. ++...|++..|+|..-. ..|...+++.++..++.+.+.. -+.+|
T Consensus 65 nl~~~~~g~--~~~~~lll~~H~Dtvp~~~~~~W~~~p~~~~~~~g~lyGrG~~D~K~g~~a~l~a~~~l~~~~~~~~~~ 142 (400)
T PRK13983 65 NIVAKIPGG--DGKRTLWIISHMDVVPPGDLSLWETDPFKPVVKDGKIYGRGSEDNGQGIVSSLLALKALMDLGIRPKYN 142 (400)
T ss_pred cEEEEecCC--CCCCeEEEEeeccccCCCCcccccCCCCcceeeCCEEEecCccCccchHHHHHHHHHHHHHhCCCCCCc
Confidence 999998762 23348999999876421 1233567887877777776543 56789
Q ss_pred eEEEeeCCCC-CCchhHHHHHHhh
Q 009044 203 IIWLVADSQY-GEYAPVAAWLRDY 225 (546)
Q Consensus 203 IIfl~~D~~~-g~~~G~~AWL~~Y 225 (546)
|.|+|.-+++ |...|++..++++
T Consensus 143 v~~~~~~dEE~g~~~g~~~~~~~~ 166 (400)
T PRK13983 143 LGLAFVSDEETGSKYGIQYLLKKH 166 (400)
T ss_pred EEEEEEeccccCCcccHHHHHhhc
Confidence 9999975544 4445888888874
No 37
>PRK09104 hypothetical protein; Validated
Probab=96.04 E-value=0.1 Score=57.24 Aligned_cols=124 Identities=10% Similarity=0.059 Sum_probs=81.7
Q ss_pred HHHHHHHHHhhhcCCCCC-----ccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccce
Q 009044 74 ANKLIKELNNLHSNPLGA-----TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGIN 148 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~-----~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~N 148 (546)
+.++.++|-+.+..+.+. .....+||.++|+++|+++..+.. ....|
T Consensus 19 ~~~~L~~lv~i~Svs~~~~~~~~~~~~~~~l~~~l~~~G~~v~~~~~----------------------------~~~~~ 70 (464)
T PRK09104 19 SLERLFALLRIPSISTDPAYAADCRKAADWLVADLASLGFEASVRDT----------------------------PGHPM 70 (464)
T ss_pred HHHHHHHHhcCCCCCCCccchHHHHHHHHHHHHHHHHCCCeEEEEec----------------------------CCCCE
Confidence 344455555554433221 124679999999999999776541 01358
Q ss_pred EEEEEeCCCCCCceEEEEEEeecCCC-----------------------------CCCcchhhHHHHHHHHHHHhc-CCC
Q 009044 149 TVGIIRAPRGDGKEAIVLVTPYNAVK-----------------------------GGVRETLSLGIAYSVFSLLTR-VTW 198 (546)
Q Consensus 149 vygIlrAPRgdgtEAIVL~ap~~~~~-----------------------------~~~~~~~gval~LaL~~yl~r-~~~ 198 (546)
+++.+++.+ .+...++|..|+|... |..+...+++.++..++-|++ ...
T Consensus 71 l~a~~~g~~-~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~~~~~~~~~~~lyGRG~~D~Kg~laa~l~a~~~l~~~~~~ 149 (464)
T PRK09104 71 VVAHHEGPT-GDAPHVLFYGHYDVQPVDPLDLWESPPFEPRIKETPDGRKVIVARGASDDKGQLMTFVEACRAWKAVTGS 149 (464)
T ss_pred EEEEecCCC-CCCCEEEEEecccCCCCCCcccCCCCCCcceEecCcCCcceEEEecccCCcHHHHHHHHHHHHHHHhcCC
Confidence 999987532 2456899998887521 112335678888888887765 345
Q ss_pred CCcceEEEeeCCCCCCchhHHHHHHhhc
Q 009044 199 LAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (546)
Q Consensus 199 waKDIIfl~~D~~~g~~~G~~AWL~~YH 226 (546)
+..+|+|+++-+++.+..|++.++++..
T Consensus 150 ~~~~i~~~~~~dEE~g~~g~~~~l~~~~ 177 (464)
T PRK09104 150 LPVRVTILFEGEEESGSPSLVPFLEANA 177 (464)
T ss_pred CCCcEEEEEECccccCCccHHHHHHhhH
Confidence 6789999997545555679999998754
No 38
>TIGR03176 AllC allantoate amidohydrolase. This enzyme catalyzes the breakdown of allantoate, first to ureidoglycine by hydrolysis and then decarboxylation of one of the two equivalent ureido groups. Ureidoglycine then spontaneously exchanges ammonia for water resulting in ureidoglycolate. This enzyme is an alternative to allantoicase (3.5.3.4) which releases urea.
Probab=96.01 E-value=0.055 Score=58.50 Aligned_cols=97 Identities=13% Similarity=0.097 Sum_probs=74.8
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecCC
Q 009044 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (546)
Q Consensus 94 ~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~~ 173 (546)
..++|+.++|+++|+++..-. . -|++|.+.+.. .+..+|++-.|.|+.
T Consensus 34 ~a~~~~~~~~~~~Gl~v~~D~------------------------------~-gN~~~~~~g~~-~~~~~i~~gsHlDtv 81 (406)
T TIGR03176 34 AAQQQFKKRMAESGLETRFDD------------------------------V-GNLYGRLVGTE-FPEETILTGSHIDTV 81 (406)
T ss_pred HHHHHHHHHHHHcCCEEEEcC------------------------------C-CcEEEEecCCC-CCCCeEEEeccccCC
Confidence 467999999999999865221 1 39999998733 356799999999986
Q ss_pred C--CCCcchhhHHHHHHHHHHHhcC-CCCCcceEEEeeCCCCCC-----chhHHHHH
Q 009044 174 K--GGVRETLSLGIAYSVFSLLTRV-TWLAKDIIWLVADSQYGE-----YAPVAAWL 222 (546)
Q Consensus 174 ~--~~~~~~~gval~LaL~~yl~r~-~~waKDIIfl~~D~~~g~-----~~G~~AWL 222 (546)
. |..+...||..+|..++.++.. .-..++|-+++.=.++|. ..|.++|.
T Consensus 82 ~~gG~~dg~~Gv~~~le~~~~l~~~~~~~~~~i~vi~~~~EEg~rf~~~~~Gs~~~~ 138 (406)
T TIGR03176 82 VNGGNLDGQFGALAAWLAVDYLKEKYGAPLRTVEVLSMAEEEGSRFPYVFWGSKNIF 138 (406)
T ss_pred CCCCccCchhhHHHHHHHHHHHHHcCCCCCCCeEEEEeccccCccCCcccccHHHHh
Confidence 3 2345678999999999999876 677889999986555554 67888876
No 39
>COG2234 Iap Predicted aminopeptidases [General function prediction only]
Probab=95.90 E-value=0.043 Score=59.34 Aligned_cols=115 Identities=14% Similarity=0.146 Sum_probs=81.5
Q ss_pred cccceEEEEEeCCCCCCceEEEEE----------EeecCC---CCCCcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCC
Q 009044 144 LYGINTVGIIRAPRGDGKEAIVLV----------TPYNAV---KGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADS 210 (546)
Q Consensus 144 ~~G~NvygIlrAPRgdgtEAIVL~----------ap~~~~---~~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~ 210 (546)
....|+.+...+. .-..++++.. .++++. .|..+++.|++.+|.++|+|++.+ --++|.|++.++
T Consensus 182 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~s~~~~~GA~DNasGva~llEiAr~l~~~~-p~~~v~f~~~~a 259 (435)
T COG2234 182 LTSKNVAATISGS-SQIIEAIIGTAHSDSLGLLGAHIDSVPTGPGADDNASGVAALLELARVLKGNP-PKRTVRFVAFGA 259 (435)
T ss_pred eEEEEEeeeeecc-cccceEEEeccCCCceeeecccccCCcCCCCcccccHHHHHHHHHHHHHhcCC-CCceEEEEEecc
Confidence 4566777777765 2334444444 445431 356678999999999999999998 588999999999
Q ss_pred CCCCchhHHHHHHhhcCCCCCCCCCcccccccCCCCCcccccccccccccceeeeEEEEecCCCCCCceEEEEeecCCC
Q 009044 211 QYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENEDTLGIYAEASNG 289 (546)
Q Consensus 211 ~~g~~~G~~AWL~~YH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~raG~I~aAlvle~~~~~~~~~~l~I~~eG~NG 289 (546)
++.+..|.+++++.+.... + +. +...+|+|..+.......+.++..+..+
T Consensus 260 EE~Gl~GS~~~~~~~~~~~----~-------------------~~------~~~viN~Dm~g~~~~~~~~~~~~~~~~~ 309 (435)
T COG2234 260 EESGLLGSEAYVKRLSKDL----D-------------------KK------IALVINLDMLGSPNPTPTLILYGNGLER 309 (435)
T ss_pred hhhcccccHHHHhcCCcch----h-------------------hh------hheEEecccccCCCCCcceEEeccCCcc
Confidence 9888999999999976421 0 01 4567777777654325677777777777
No 40
>PRK13590 putative bifunctional OHCU decarboxylase/allantoate amidohydrolase; Provisional
Probab=95.86 E-value=0.061 Score=61.17 Aligned_cols=96 Identities=17% Similarity=0.180 Sum_probs=71.2
Q ss_pred chHHHHHHHHHhcCC-ceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecC
Q 009044 94 ESHGIIAKYMSNLGA-QVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (546)
Q Consensus 94 ~~~~~I~~~l~~lGl-e~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~ 172 (546)
..++|+.++|+++|+ ++.... --|++|+++++. .+..+|++..|.|+
T Consensus 215 ~~~~~l~~~~~~~Gl~~v~~D~-------------------------------~GNl~~~~~g~~-~~~~~v~~gsHlDT 262 (591)
T PRK13590 215 ACAQQISHWMRDCGFDEVHIDA-------------------------------VGNVVGRYKGST-PQAKRLLTGSHYDT 262 (591)
T ss_pred HHHHHHHHHHHHcCCCeeeECC-------------------------------CCCEEEEecCCC-CCCCeEEEeccccc
Confidence 568999999999999 654221 148999988744 34578999999998
Q ss_pred C--CCCCcchhhHHHHHHHHHHHhcCCC-CCcceEEEeeCCCCC-----CchhHHHH
Q 009044 173 V--KGGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYG-----EYAPVAAW 221 (546)
Q Consensus 173 ~--~~~~~~~~gval~LaL~~yl~r~~~-waKDIIfl~~D~~~g-----~~~G~~AW 221 (546)
. .|..+...||+.+|..++.|++... ..++|.++++-++++ ...|.++|
T Consensus 263 V~~gG~~DG~~Gv~a~lea~~~l~~~~~~~~~~i~vv~~~~EEg~rF~~~~~GS~~~ 319 (591)
T PRK13590 263 VRNGGKYDGRLGIFVPMACVRELHRQGRRLPFGLEVVGFAEEEGQRYKATFLGSGAL 319 (591)
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCccccCCccccchHHH
Confidence 6 2335667899999999999987653 467999999755554 25566664
No 41
>PRK08201 hypothetical protein; Provisional
Probab=95.81 E-value=0.13 Score=56.26 Aligned_cols=102 Identities=9% Similarity=0.076 Sum_probs=69.7
Q ss_pred chHHHHHHHHHhcCCc-eeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecC
Q 009044 94 ESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (546)
Q Consensus 94 ~~~~~I~~~l~~lGle-~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~ 172 (546)
+..+||.++|+++|++ +..+.. ....|+++.+.+ +.+...+++..|+|.
T Consensus 41 ~~a~~l~~~l~~~G~~~~~~~~~----------------------------~~~~~l~a~~~~--~~~~~~lll~gH~Dv 90 (456)
T PRK08201 41 KAAEWLAGALEKAGLEHVEIMET----------------------------AGHPIVYADWLH--APGKPTVLIYGHYDV 90 (456)
T ss_pred HHHHHHHHHHHHcCCCeEEEEec----------------------------CCCCEEEEEecC--CCCCCEEEEEeccCC
Confidence 4689999999999997 444421 012488887754 223456999988876
Q ss_pred CC------------------------CCCcchhhHHHHHHHHHHHhc-CCCCCcceEEEeeCCCCCCchhHHHHHHhh
Q 009044 173 VK------------------------GGVRETLSLGIAYSVFSLLTR-VTWLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (546)
Q Consensus 173 ~~------------------------~~~~~~~gval~LaL~~yl~r-~~~waKDIIfl~~D~~~g~~~G~~AWL~~Y 225 (546)
.. |..|...+++.+++.++.+.+ ..-+..+|+|+++-+++.+..|+..|++++
T Consensus 91 Vp~~~~~~W~~dPf~~~~~~g~lyGRG~~DmKgglaa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~ 168 (456)
T PRK08201 91 QPVDPLNLWETPPFEPTIRDGKLYARGASDDKGQVFMHLKAVEALLKVEGTLPVNVKFCIEGEEEIGSPNLDSFVEEE 168 (456)
T ss_pred cCCCchhcccCCCCceEeECCEEEEEecccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccCCccHHHHHHhh
Confidence 21 112346788888888877754 344567999999755555567899999875
No 42
>PRK07205 hypothetical protein; Provisional
Probab=95.71 E-value=0.15 Score=55.63 Aligned_cols=122 Identities=14% Similarity=0.084 Sum_probs=75.8
Q ss_pred hhHHHHHHHHHHHhhhcCCCCC---------ccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCC
Q 009044 70 EVSEANKLIKELNNLHSNPLGA---------TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENS 140 (546)
Q Consensus 70 ~~~~a~~y~~el~~~~~~~~~~---------~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~ 140 (546)
....+.+..++|-+.+.-+.+. ..+..+|+.++|+++|+++..+.
T Consensus 9 ~~~~~~~~l~~lv~i~S~s~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~-------------------------- 62 (444)
T PRK07205 9 VQDACVAAIKTLVSYPSVLNEGENGTPFGQAIQDVLEATLDLCQGLGFKTYLDP-------------------------- 62 (444)
T ss_pred hHHHHHHHHHHHcccccccCCCcCCCCCchhHHHHHHHHHHHHHhCCCEEEEcC--------------------------
Confidence 3344555556665555433221 12356788899999999866431
Q ss_pred ccccccceEEEEEeCCCCCCceEEEEEEeecCCC------------------------CCCcchhhHHHHHHHHHHHhcC
Q 009044 141 TRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRV 196 (546)
Q Consensus 141 ~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~~~------------------------~~~~~~~gval~LaL~~yl~r~ 196 (546)
.|.++++.. +++.+.++|..|+|..- |..|...+++.++..++.+++.
T Consensus 63 ----~~~~~~~~~----g~~~~~lll~gH~DvVp~~~~~~W~~~Pf~~~v~dg~lyGRGa~DmKgglaa~l~Al~~l~~~ 134 (444)
T PRK07205 63 ----KGYYGYAEI----GQGEELLAILCHLDVVPEGDLSDWQTPPFEAVEKDGCLFGRGTQDDKGPSMAALYAVKALLDA 134 (444)
T ss_pred ----CCeEEEEEe----cCCCcEEEEEEeeccCCCCCcccCCCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHc
Confidence 112333332 34556799998887641 2224456788887777777554
Q ss_pred -CCCCcceEEEeeCCCCCCchhHHHHHHhh
Q 009044 197 -TWLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (546)
Q Consensus 197 -~~waKDIIfl~~D~~~g~~~G~~AWL~~Y 225 (546)
.-+.++|.++++-+++.+..|++.+++.+
T Consensus 135 ~~~~~~~i~l~~~~dEE~g~~g~~~~~~~~ 164 (444)
T PRK07205 135 GVQFNKRIRFIFGTDEETLWRCMNRYNEVE 164 (444)
T ss_pred CCCCCCcEEEEEECCcccCcccHHHHHhCC
Confidence 44678999999744444557999999864
No 43
>TIGR01902 dapE-lys-deAc N-acetyl-ornithine/N-acetyl-lysine deacetylase. This clade of mainly archaeal and related bacterial species contains two characterized enzymes, an deacetylase with specificity for both N-acetyl-ornithine and N-acetyl-lysine from Thermus which is found within a lysine biosynthesis operon, and a fusion protein with acetyl-glutamate kinase (an enzyme of ornithine biosynthesis) from Lactobacillus. It is possible that all of the sequences within this clade have dual specificity, or that a mix of specificities have evolved within this clade.
Probab=95.67 E-value=0.086 Score=54.98 Aligned_cols=110 Identities=16% Similarity=0.104 Sum_probs=74.7
Q ss_pred HHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCC
Q 009044 78 IKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPR 157 (546)
Q Consensus 78 ~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPR 157 (546)
.++|-+....+++ ..+..+||.++|+++|+++... . ..|+++..
T Consensus 3 l~~lv~i~s~s~~-e~~~~~~l~~~l~~~g~~~~~~----~---------------------------~~~~~~~~---- 46 (336)
T TIGR01902 3 LKDLLEIYSPSGK-EANAAKFLEEISKDLGLKLIID----D---------------------------AGNFILGK---- 46 (336)
T ss_pred HHHHhcCCCCCcc-hHHHHHHHHHHHHHcCCEEEEC----C---------------------------CCcEEEEe----
Confidence 3455555554433 3467899999999999987211 0 12666643
Q ss_pred CCCceEEEEEEeecCC---------------CCCCcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchhHHHHH
Q 009044 158 GDGKEAIVLVTPYNAV---------------KGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWL 222 (546)
Q Consensus 158 gdgtEAIVL~ap~~~~---------------~~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~~AWL 222 (546)
+.+...|++..|+|.. .|..|...+++.+++.++.+++.. .||+|+++-+++.+..|++..+
T Consensus 47 ~~~~~~i~~~~H~D~vp~~~~~~~~~g~i~GrG~~D~Kg~~aa~l~a~~~l~~~~---~~i~~~~~~dEE~g~~G~~~~~ 123 (336)
T TIGR01902 47 GDGHKKILLAGHVDTVPGYIPVKIEGGLLYGRGAVDAKGPLIAMIFATWLLNEKG---IKVIVSGLVDEESSSKGAREVI 123 (336)
T ss_pred CCCCceEEEEccccccCCCcccEEeCCEEEEecccCCCcHHHHHHHHHHHHHhCC---CcEEEEEEeCcccCCccHHHHH
Confidence 2334679999998874 233455678888888888887655 4899999755555668999999
Q ss_pred Hhhc
Q 009044 223 RDYH 226 (546)
Q Consensus 223 ~~YH 226 (546)
+.+.
T Consensus 124 ~~~~ 127 (336)
T TIGR01902 124 DKNY 127 (336)
T ss_pred hhcC
Confidence 8843
No 44
>PRK05469 peptidase T; Provisional
Probab=95.63 E-value=0.14 Score=55.06 Aligned_cols=100 Identities=10% Similarity=0.062 Sum_probs=69.7
Q ss_pred cchHHHHHHHHHhcCCc-eeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeec
Q 009044 93 TESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYN 171 (546)
Q Consensus 93 ~~~~~~I~~~l~~lGle-~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~ 171 (546)
..+.+||.++|+++|++ +... ..-||+|.+++....+...|+|.+++|
T Consensus 32 ~~~a~~l~~~l~~~G~~~~~~~-------------------------------~~~~v~~~~~g~~~~~~~~i~l~~H~D 80 (408)
T PRK05469 32 WDLAKLLVEELKELGLQDVTLD-------------------------------ENGYVMATLPANVDKDVPTIGFIAHMD 80 (408)
T ss_pred HHHHHHHHHHHHHcCCCeEEEC-------------------------------CCeEEEEEecCCCCCCCCeEEEEEecc
Confidence 35689999999999996 3311 123799999763223458899999998
Q ss_pred CCC-------------------------------------------------CC----CcchhhHHHHHHHHHHHhcCC-
Q 009044 172 AVK-------------------------------------------------GG----VRETLSLGIAYSVFSLLTRVT- 197 (546)
Q Consensus 172 ~~~-------------------------------------------------~~----~~~~~gval~LaL~~yl~r~~- 197 (546)
..- |. .|...|++.++..++.|++..
T Consensus 81 ~vp~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~rG~~~lg~D~Kgglaa~l~a~~~l~~~~~ 160 (408)
T PRK05469 81 TAPDFSGKNVKPQIIENYDGGDIALGDGNEVLSPAEFPELKNYIGQTLITTDGTTLLGADDKAGIAEIMTALEYLIAHPE 160 (408)
T ss_pred CCCCCCCCCCCCEEeccCCCcceecCCCceEechHhCchHHhccCCCEEEcCCCEeecccchHHHHHHHHHHHHHHhCCC
Confidence 651 11 344567888888888887653
Q ss_pred CCCcceEEEeeCCCCCCchhHHHHHHh
Q 009044 198 WLAKDIIWLVADSQYGEYAPVAAWLRD 224 (546)
Q Consensus 198 ~waKDIIfl~~D~~~g~~~G~~AWL~~ 224 (546)
-+..+|+|+|+=+++.+ .|+++++.+
T Consensus 161 ~~~g~v~~~f~~dEE~g-~Ga~~~~~~ 186 (408)
T PRK05469 161 IKHGDIRVAFTPDEEIG-RGADKFDVE 186 (408)
T ss_pred CCCCCEEEEEecccccC-CCHHHhhhh
Confidence 34569999997555444 688888643
No 45
>PRK00466 acetyl-lysine deacetylase; Validated
Probab=95.62 E-value=0.12 Score=54.28 Aligned_cols=111 Identities=14% Similarity=0.082 Sum_probs=75.3
Q ss_pred HHHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEE
Q 009044 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (546)
Q Consensus 73 ~a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygI 152 (546)
++.++..+|-+....+++ ....++||.++|+++|+++.... ..|++.
T Consensus 11 ~~~~~l~~lv~i~s~s~~-e~~~~~~l~~~l~~~g~~~~~~~-------------------------------~~~~~~- 57 (346)
T PRK00466 11 KAKELLLDLLSIYTPSGN-ETNATKFFEKISNELNLKLEILP-------------------------------DSNSFI- 57 (346)
T ss_pred HHHHHHHHHhcCCCCCCC-HHHHHHHHHHHHHHcCCeEEEec-------------------------------CCCcEe-
Confidence 455666677666654433 34688999999999999866432 013331
Q ss_pred EeCCCCCCceEEEEEEeecCC---------------CCCCcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchh
Q 009044 153 IRAPRGDGKEAIVLVTPYNAV---------------KGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAP 217 (546)
Q Consensus 153 lrAPRgdgtEAIVL~ap~~~~---------------~~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G 217 (546)
.+ ...++|..|+|.. .|..|...+++.+++.++.+++.. ..++|+++-+++.+..|
T Consensus 58 -~g-----~~~lll~gH~DtVp~~~~~~~~~g~iyGrG~~DmKgg~aa~l~a~~~l~~~~---~~i~~~~~~dEE~g~~G 128 (346)
T PRK00466 58 -LG-----EGDILLASHVDTVPGYIEPKIEGEVIYGRGAVDAKGPLISMIIAAWLLNEKG---IKVMVSGLADEESTSIG 128 (346)
T ss_pred -cC-----CCeEEEEeccccCCCCCCceeeCCEEEecCccccchHHHHHHHHHHHHHHcC---CCEEEEEEcCcccCCcc
Confidence 22 2358888888875 344556778888888888887655 25888887555555679
Q ss_pred HHHHHHhh
Q 009044 218 VAAWLRDY 225 (546)
Q Consensus 218 ~~AWL~~Y 225 (546)
+++++++.
T Consensus 129 ~~~l~~~~ 136 (346)
T PRK00466 129 AKELVSKG 136 (346)
T ss_pred HHHHHhcC
Confidence 99999863
No 46
>COG0624 ArgE Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases [Amino acid transport and metabolism]
Probab=95.61 E-value=0.19 Score=53.96 Aligned_cols=123 Identities=22% Similarity=0.251 Sum_probs=84.0
Q ss_pred HHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCC
Q 009044 78 IKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPR 157 (546)
Q Consensus 78 ~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPR 157 (546)
.+++-+....+.+.....++|+.++|+++|+++....+... . ...|+++...++.
T Consensus 19 l~~lv~~~s~s~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~------------------------~-~~~n~~~~~~~~~ 73 (409)
T COG0624 19 LKELVRIPSVSAGEEAEAAELLAEWLEELGFEVEEDEVGPG------------------------P-GRPNLVARLGGGD 73 (409)
T ss_pred HHHHhcCCCCCcccchHHHHHHHHHHHHcCCceEEeecCCC------------------------C-CceEEEEEecCCC
Confidence 34444443333222346889999999999998776553211 0 2359999988744
Q ss_pred CCCceEEEEEEeecCCC------------------------CCCcchhhHHHHHHHHHHHhc-CCCCCcceEEEeeCCCC
Q 009044 158 GDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTR-VTWLAKDIIWLVADSQY 212 (546)
Q Consensus 158 gdgtEAIVL~ap~~~~~------------------------~~~~~~~gval~LaL~~yl~r-~~~waKDIIfl~~D~~~ 212 (546)
++ +.++|..|+|..- |..|+..+++..+..++-+.. ...+.+++.++++-+++
T Consensus 74 ~~--~~l~l~~H~DvVP~g~~~~W~~~Pf~~~~~dg~lyGRG~~D~KG~~~a~l~A~~~l~~~~~~~~~~v~~~~~~dEE 151 (409)
T COG0624 74 GG--PTLLLGGHLDVVPAGGGEDWTTDPFEPTIKDGKLYGRGAADMKGGLAAALYALSALKAAGGELPGDVRLLFTADEE 151 (409)
T ss_pred CC--CeEEEeccccccCCCCcccCccCCCccEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCeEEEEEEEeccc
Confidence 33 9999999987641 122445677777777776655 57778999999975555
Q ss_pred CCchhHHHHHHhhcC
Q 009044 213 GEYAPVAAWLRDYHT 227 (546)
Q Consensus 213 g~~~G~~AWL~~YH~ 227 (546)
.+..|+.+|+++...
T Consensus 152 ~g~~~~~~~~~~~~~ 166 (409)
T COG0624 152 SGGAGGKAYLEEGEE 166 (409)
T ss_pred cCCcchHHHHHhcch
Confidence 555899999999764
No 47
>PRK13004 peptidase; Reviewed
Probab=95.51 E-value=0.26 Score=52.84 Aligned_cols=116 Identities=10% Similarity=0.023 Sum_probs=75.5
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEE
Q 009044 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIl 153 (546)
+.++.++|-+....+.+ ..+.+++|.++|+++|+++.... ...|+++.+
T Consensus 17 ~~~~l~~lv~ips~s~~-e~~~a~~l~~~l~~~G~~~~~~~------------------------------~~~n~~a~~ 65 (399)
T PRK13004 17 MTRFLRDLIRIPSESGD-EKRVVKRIKEEMEKVGFDKVEID------------------------------PMGNVLGYI 65 (399)
T ss_pred HHHHHHHHhcCCCCCCc-hHHHHHHHHHHHHHcCCcEEEEc------------------------------CCCeEEEEE
Confidence 44555555555554443 23678999999999998743110 113788877
Q ss_pred eCCCCCCceEEEEEEeecCCCC------------------------CCcchhhHHHHHHHHHHHhcCCC-CCcceEEEee
Q 009044 154 RAPRGDGKEAIVLVTPYNAVKG------------------------GVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVA 208 (546)
Q Consensus 154 rAPRgdgtEAIVL~ap~~~~~~------------------------~~~~~~gval~LaL~~yl~r~~~-waKDIIfl~~ 208 (546)
.+ +...|++.+++|.... ..|...+++.+++.++.+++... +.++|+++++
T Consensus 66 ~~----~~~~i~~~~H~DtVp~~~~~~w~~~P~~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~i~~~~~ 141 (399)
T PRK13004 66 GH----GKKLIAFDAHIDTVGIGDIKNWDFDPFEGEEDDGRIYGRGTSDQKGGMASMVYAAKIIKDLGLDDEYTLYVTGT 141 (399)
T ss_pred CC----CCcEEEEEeccCccCCCChhhcccCCCccEEECCEEEeCCccccchHHHHHHHHHHHHHhcCCCCCCeEEEEEE
Confidence 54 2267999998876421 11234688989998998876543 5789999996
Q ss_pred CCCC-CCchhHHHHHHh
Q 009044 209 DSQY-GEYAPVAAWLRD 224 (546)
Q Consensus 209 D~~~-g~~~G~~AWL~~ 224 (546)
-+++ ++..|.+.++++
T Consensus 142 ~~EE~~~g~~~~~~~~~ 158 (399)
T PRK13004 142 VQEEDCDGLCWRYIIEE 158 (399)
T ss_pred cccccCcchhHHHHHHh
Confidence 4433 334567777775
No 48
>PRK08651 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=95.43 E-value=0.15 Score=54.22 Aligned_cols=129 Identities=10% Similarity=0.067 Sum_probs=82.2
Q ss_pred HHHHHHHHHHhhhcCCC--CCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEE
Q 009044 73 EANKLIKELNNLHSNPL--GATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (546)
Q Consensus 73 ~a~~y~~el~~~~~~~~--~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~Nvy 150 (546)
.+.++.++|-+.+..+. +...+..+||.++|+++|+++..+..... . .+.. .....|++
T Consensus 7 ~~~~~l~~lv~i~S~s~~~~~~~~~a~~l~~~l~~~G~~~~~~~~~~~---------------~---~~~~-~~~~~~~~ 67 (394)
T PRK08651 7 DIVEFLKDLIKIPTVNPPGENYEEIAEFLRDTLEELGFSTEIIEVPNE---------------Y---VKKH-DGPRPNLI 67 (394)
T ss_pred HHHHHHHHHhcCCccCCCCcCHHHHHHHHHHHHHHcCCeEEEEecCcc---------------c---cccc-cCCcceEE
Confidence 34555666666665431 22236789999999999998776642110 0 0000 01135677
Q ss_pred EEEeCCCCCCceEEEEEEeecCCCC-----------------------CCcchhhHHHHHHHHHHHhcCCCCCcceEEEe
Q 009044 151 GIIRAPRGDGKEAIVLVTPYNAVKG-----------------------GVRETLSLGIAYSVFSLLTRVTWLAKDIIWLV 207 (546)
Q Consensus 151 gIlrAPRgdgtEAIVL~ap~~~~~~-----------------------~~~~~~gval~LaL~~yl~r~~~waKDIIfl~ 207 (546)
+.. +.+...|++.+|+|.... ..+...+++.+++.++.+++.. .+||.++|
T Consensus 68 ~~~----~~~~~~ill~~HlDtvp~~~~~~~~~Pf~~~~~~~~~~grG~~D~k~~~~~~l~a~~~l~~~~--~~~v~~~~ 141 (394)
T PRK08651 68 ARR----GSGNPHLHFNGHYDVVPPGEGWSVNVPFEPKVKDGKVYGRGASDMKGGIAALLAAFERLDPAG--DGNIELAI 141 (394)
T ss_pred EEe----CCCCceEEEEeeeeeecCCCCccccCCCCcEEECCEEEecCccccchHHHHHHHHHHHHHhcC--CCCEEEEE
Confidence 643 233368999988875311 1223568999999999987765 79999999
Q ss_pred eCCCCCCchhHHHHHHhhc
Q 009044 208 ADSQYGEYAPVAAWLRDYH 226 (546)
Q Consensus 208 ~D~~~g~~~G~~AWL~~YH 226 (546)
+-+++.+..|++.++++..
T Consensus 142 ~~~EE~g~~G~~~~~~~~~ 160 (394)
T PRK08651 142 VPDEETGGTGTGYLVEEGK 160 (394)
T ss_pred ecCccccchhHHHHHhccC
Confidence 7555544579999998753
No 49
>PRK13799 unknown domain/N-carbamoyl-L-amino acid hydrolase fusion protein; Provisional
Probab=95.30 E-value=0.13 Score=58.68 Aligned_cols=97 Identities=18% Similarity=0.194 Sum_probs=73.0
Q ss_pred chHHHHHHHHHhcCCc-eeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecC
Q 009044 94 ESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (546)
Q Consensus 94 ~~~~~I~~~l~~lGle-~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~ 172 (546)
..++|+.++|+++|++ +.+.. --||+|.++++. .+..++++-.|.|+
T Consensus 215 ~~~~~~~~~~~~~Gl~~v~~D~-------------------------------~gNv~~~~~g~~-~~~p~v~~gSHlDT 262 (591)
T PRK13799 215 ACANQISDWMRDAGFDEVEIDA-------------------------------VGNVVGRYKAAD-DDAKTLITGSHYDT 262 (591)
T ss_pred HHHHHHHHHHHHcCCCeEeECC-------------------------------CCCEEEEcCCCC-CCCCeEEEeccccc
Confidence 4689999999999997 77432 148999987643 24568999999998
Q ss_pred C--CCCCcchhhHHHHHHHHHHHhcCCC-CCcceEEEeeCCCCC-----CchhHHHHH
Q 009044 173 V--KGGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYG-----EYAPVAAWL 222 (546)
Q Consensus 173 ~--~~~~~~~~gval~LaL~~yl~r~~~-waKDIIfl~~D~~~g-----~~~G~~AWL 222 (546)
. .|..+...||+.+|..++.|+.... ..+||.++..=.++| ...|.++|.
T Consensus 263 V~~gG~~DG~~Gv~a~l~~~~~l~~~~~~~~~~i~vi~~~~EEg~rF~~~~~GS~~~~ 320 (591)
T PRK13799 263 VRNGGKYDGREGIFLAIACVKELHEQGERLPFHFEVIAFAEEEGQRFKATFLGSGALI 320 (591)
T ss_pred cCCCCccccHHHHHHHHHHHHHHHHcCCCCCCCeEEEEecCCCccCCCccccchHHHh
Confidence 6 3345567899999999999976543 578999998644454 467778875
No 50
>PRK13007 succinyl-diaminopimelate desuccinylase; Reviewed
Probab=95.21 E-value=0.23 Score=51.94 Aligned_cols=113 Identities=16% Similarity=0.163 Sum_probs=74.0
Q ss_pred HHHHHHHHHHhhhcCCCCCccchHHHHHHHHHhc-CCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEE
Q 009044 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNL-GAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (546)
Q Consensus 73 ~a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~l-Gle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~Nvyg 151 (546)
+..++.++|-+....+.+. ....+||.++|+++ |+++.. .+.|+++
T Consensus 8 ~~~~~l~~li~ips~s~~e-~~~~~~l~~~l~~~~~~~~~~--------------------------------~~~~~~~ 54 (352)
T PRK13007 8 DLAELTAALVDIPSVSGDE-KALADAVEAALRALPHLEVIR--------------------------------HGNSVVA 54 (352)
T ss_pred HHHHHHHHHhcCCCCCchH-HHHHHHHHHHHHhCcCceEEe--------------------------------cCCeEEE
Confidence 3455666666666554433 36789999999996 765331 1358888
Q ss_pred EEeCCCCCCceEEEEEEeecCC-----------------CCCCcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCC-C
Q 009044 152 IIRAPRGDGKEAIVLVTPYNAV-----------------KGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQY-G 213 (546)
Q Consensus 152 IlrAPRgdgtEAIVL~ap~~~~-----------------~~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~-g 213 (546)
.+.. +.+ ..|++.+|+|.. .|..|...+++.+++.++.+.. ..++|.++|+-+++ +
T Consensus 55 ~~~~--~~~-~~i~l~~H~Dtvp~~~~~~~~~~~g~i~GrG~~D~Kg~~a~~l~a~~~l~~---~~~~i~~~~~~~EE~~ 128 (352)
T PRK13007 55 RTDL--GRP-SRVVLAGHLDTVPVADNLPSRREGDRLYGCGASDMKSGLAVMLHLAATLAE---PAHDLTLVFYDCEEVE 128 (352)
T ss_pred EccC--CCC-CeEEEEccccccCCCCCCCcceeCCEEEccCcccccHHHHHHHHHHHHhhc---cCCCeEEEEEeccccc
Confidence 8732 222 259999888763 2233456789999999988843 57899999964433 2
Q ss_pred C-chhHHHHHHh
Q 009044 214 E-YAPVAAWLRD 224 (546)
Q Consensus 214 ~-~~G~~AWL~~ 224 (546)
+ ..|++..+++
T Consensus 129 ~~~~G~~~~~~~ 140 (352)
T PRK13007 129 AEANGLGRLARE 140 (352)
T ss_pred CCcccHHHHHHh
Confidence 2 2578877765
No 51
>TIGR01880 Ac-peptdase-euk N-acyl-L-amino-acid amidohydrolase. This model represents a family of eukaryotic N-acyl-L-amino-acid amidohydrolases active on fatty acid and acetyl amides of L-amino acids.
Probab=95.20 E-value=0.37 Score=51.56 Aligned_cols=123 Identities=11% Similarity=-0.016 Sum_probs=77.7
Q ss_pred HHHHHHHHHhhhcCCCCC-ccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEE
Q 009044 74 ANKLIKELNNLHSNPLGA-TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~-~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygI 152 (546)
+.++.++|-+.+..+... ..+..+||.++|+++|+++..+... ..+.|+++.
T Consensus 11 ~~~~l~~lv~ipS~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~---------------------------~g~~~l~~~ 63 (400)
T TIGR01880 11 AVTRFREYLRINTVQPNPDYAACVDFLIKQADELGLARKTIEFV---------------------------PGKPVVVLT 63 (400)
T ss_pred HHHHHHHHhccCccCCCccHHHHHHHHHHHHHhCCCceeEEEec---------------------------CCceeEEEE
Confidence 345556666665543321 2467899999999999987654310 013588888
Q ss_pred EeCCCCCCceEEEEEEeecCCC------------------------CCCcchhhHHHHHHHHHHHhcCC-CCCcceEEEe
Q 009044 153 IRAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLV 207 (546)
Q Consensus 153 lrAPRgdgtEAIVL~ap~~~~~------------------------~~~~~~~gval~LaL~~yl~r~~-~waKDIIfl~ 207 (546)
+++... +.-.|+|.+|+|... |..|...+++.++..++.+.+.. -+.++|.++|
T Consensus 64 ~~g~~~-~~~~i~l~~H~DvVp~~~~~W~~~Pf~~~~~~dg~iyGrG~~D~K~~~aa~l~a~~~l~~~~~~~~~~v~l~~ 142 (400)
T TIGR01880 64 WPGSNP-ELPSILLNSHTDVVPVFREHWTHPPFSAFKDEDGNIYARGAQDMKCVGVQYLEAVRNLKASGFKFKRTIHISF 142 (400)
T ss_pred EecCCC-CCCeEEEEcccccCCCCcccCccCCccceecCCCeEEEcccccccHHHHHHHHHHHHHHHcCCCCCceEEEEE
Confidence 865211 113688888776531 11133456777777788776643 4578999999
Q ss_pred eCCCCC-CchhHHHHHHh
Q 009044 208 ADSQYG-EYAPVAAWLRD 224 (546)
Q Consensus 208 ~D~~~g-~~~G~~AWL~~ 224 (546)
+-+++. +..|++..+++
T Consensus 143 ~~dEE~g~~~G~~~~~~~ 160 (400)
T TIGR01880 143 VPDEEIGGHDGMEKFAKT 160 (400)
T ss_pred eCCcccCcHhHHHHHHHh
Confidence 755554 34699988765
No 52
>TIGR01891 amidohydrolases amidohydrolase. This model represents a subfamily of amidohydrolases which are a subset of those sequences detected by pfam01546. Included within this group are hydrolases of hippurate (N-benzylglycine), indoleacetic acid (IAA) N-conjugates of amino acids, N-acetyl-L-amino acids and aminobenzoylglutamate. These hydrolases are of the carboxypeptidase-type, most likely utilizing a zinc ion in the active site.
Probab=95.14 E-value=0.28 Score=51.79 Aligned_cols=116 Identities=16% Similarity=0.216 Sum_probs=74.6
Q ss_pred HHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeC
Q 009044 76 KLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRA 155 (546)
Q Consensus 76 ~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrA 155 (546)
++.++|-+....+..+ .+..+||.++|+++|+++.... ....|+++.+++
T Consensus 3 ~~~~~L~~ips~s~~E-~~~a~~l~~~l~~~g~~~~~~~-----------------------------~~~~~vva~~~~ 52 (363)
T TIGR01891 3 DIRRHLHEHPELSFEE-FKTSSLIAEALESLGIEVRRGV-----------------------------GGATGVVATIGG 52 (363)
T ss_pred HHHHHHhcCCCCCCch-HHHHHHHHHHHHHcCCceEecC-----------------------------CCCcEEEEEEeC
Confidence 4556666666655433 4788999999999999875320 013588988755
Q ss_pred CCCCCceEEEEEEeecCCCC-------------CC----cchhhHHHHHHHHHHHhcCC-CCCcceEEEeeCCCCCCchh
Q 009044 156 PRGDGKEAIVLVTPYNAVKG-------------GV----RETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAP 217 (546)
Q Consensus 156 PRgdgtEAIVL~ap~~~~~~-------------~~----~~~~gval~LaL~~yl~r~~-~waKDIIfl~~D~~~g~~~G 217 (546)
. ++.-.|+|..|+|..-. +. ....+++.+++.++.+++.. -+.+||.++|+-+++.+ .|
T Consensus 53 ~--~~~~~i~l~gH~DtVp~~~~~~~pf~~~~~g~l~g~G~~~~~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~~-~G 129 (363)
T TIGR01891 53 G--KPGPVVALRADMDALPIQEQTDLPYKSTNPGVMHACGHDLHTAILLGTAKLLKKLADLLEGTVRLIFQPAEEGG-GG 129 (363)
T ss_pred C--CCCCEEEEEeccCCCCcccccCCCcccCCCCceecCcCHHHHHHHHHHHHHHHhchhhCCceEEEEEeecCcCc-ch
Confidence 2 22257999998876421 00 00134666777777776542 24679999997554433 68
Q ss_pred HHHHHHh
Q 009044 218 VAAWLRD 224 (546)
Q Consensus 218 ~~AWL~~ 224 (546)
++.++++
T Consensus 130 ~~~~~~~ 136 (363)
T TIGR01891 130 ATKMIED 136 (363)
T ss_pred HHHHHHC
Confidence 9888876
No 53
>PRK15026 aminoacyl-histidine dipeptidase; Provisional
Probab=94.98 E-value=1.1 Score=50.04 Aligned_cols=183 Identities=12% Similarity=0.095 Sum_probs=101.5
Q ss_pred HHHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEE
Q 009044 73 EANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGI 152 (546)
Q Consensus 73 ~a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygI 152 (546)
..-++.++|-+..+.+.+ ...+++||.++++++|+++.... --|+++.
T Consensus 11 ~~~~~l~~Lv~ips~S~~-e~~~~~~l~~~~~~~G~~~~~d~-------------------------------~gnvi~~ 58 (485)
T PRK15026 11 PLWDIFAKICSIPHPSYH-EEQLAEYIVGWAKEKGFHVERDQ-------------------------------VGNILIR 58 (485)
T ss_pred HHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHhCCCEEEEEe-------------------------------cCeEEEE
Confidence 344566677776655443 34688999999999999866431 1277777
Q ss_pred EeCCCC-CCceEEEEEEeecCCC---------------------------CC---CcchhhHHHHHHHHHHHhcCCCCCc
Q 009044 153 IRAPRG-DGKEAIVLVTPYNAVK---------------------------GG---VRETLSLGIAYSVFSLLTRVTWLAK 201 (546)
Q Consensus 153 lrAPRg-dgtEAIVL~ap~~~~~---------------------------~~---~~~~~gval~LaL~~yl~r~~~waK 201 (546)
..+..+ .+...++|.+|.|..- |. .+...|++.+++++ +.......
T Consensus 59 ~~~~~g~~~~~~v~l~gH~DtV~~~~~~~~~~w~~~P~~~~i~~~~l~g~Gt~lgaD~k~gva~~l~~l---~~~~~~~~ 135 (485)
T PRK15026 59 KPATAGMENRKPVVLQAHLDMVPQKNNDTVHDFTKDPIQPYIDGEWVKARGTTLGADNGIGMASALAVL---ADENVVHG 135 (485)
T ss_pred EcCCCCCCCCCEEEEEeeecccCCCCCCccccCCCCCceEEEcCCEEEeCCccccCccHHHHHHHHHHH---HhCCCCCC
Confidence 655333 3456788887775431 11 13334566655544 33333467
Q ss_pred ceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCcccccccCCCCCccccccc--ccccccceeeeEEEEecC--CCCCC
Q 009044 202 DIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISY--GIRRSGTMAAALVLGVAY--GNENE 277 (546)
Q Consensus 202 DIIfl~~D~~~g~~~G~~AWL~~YH~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~raG~I~aAlvle~~~--~~~~~ 277 (546)
+|.++|+-+++-+..|++++...+-.+. -.+ +.|+.+.. ..+.+|.+..-..+.+.. ...+.
T Consensus 136 ~i~~l~t~dEE~G~~ga~~l~~~~~~~~----~~i----------~~e~~~~g~l~~g~~G~~~~~~~~~~~r~~~~~g~ 201 (485)
T PRK15026 136 PLEVLLTMTEEAGMDGAFGLQSNWLQAD----ILI----------NTDSEEEGEIYMGCAGGIDFTSNLHLDREAVPAGF 201 (485)
T ss_pred CEEEEEEcccccCcHhHHHhhhccCCcC----EEE----------EeCCCCCCeEEEeCCCcceEEEEEEEEEEecCCCc
Confidence 9999997655556778888755432211 001 11111001 123556555443343332 11134
Q ss_pred ceEEEEeecCC----CCCCChhHHHHHHHHH
Q 009044 278 DTLGIYAEASN----GQMPNLDLINIVHYLA 304 (546)
Q Consensus 278 ~~l~I~~eG~N----GqLPNLDLiN~v~~ia 304 (546)
..+.|.+.|+- |.-|....-|.+..+|
T Consensus 202 ~~~~i~v~Gl~ggHsG~~i~~g~~nAi~~la 232 (485)
T PRK15026 202 ETFKLTLKGLKGGHSGGEIHVGLGNANKLLV 232 (485)
T ss_pred eEEEEEEECCCCcCChHHHCCCCccHHHHHH
Confidence 67899999844 4456666546554443
No 54
>PLN02693 IAA-amino acid hydrolase
Probab=94.86 E-value=0.39 Score=52.60 Aligned_cols=119 Identities=9% Similarity=0.109 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEE
Q 009044 72 SEANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVG 151 (546)
Q Consensus 72 ~~a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~Nvyg 151 (546)
....+++++|.+...-+..+. +..++|.++|+++|+++.. . ..+.|++|
T Consensus 47 ~~~~~~r~~lh~~PE~s~~E~-~ta~~i~~~L~~~G~~~~~-~-----------------------------~~~~~via 95 (437)
T PLN02693 47 DWMVRIRRKIHENPELGYEEF-ETSKLIRSELDLIGIKYRY-P-----------------------------VAITGIIG 95 (437)
T ss_pred HHHHHHHHHHHhCCCCCCchH-HHHHHHHHHHHHCCCeeEe-c-----------------------------CCCcEEEE
Confidence 345667777777766555443 6789999999999998542 1 02479999
Q ss_pred EEeCCCCCCceEEEEEEeecCCCCC-----------------CcchhhHHHHHHHHHHHhcCC-CCCcceEEEeeCCCCC
Q 009044 152 IIRAPRGDGKEAIVLVTPYNAVKGG-----------------VRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYG 213 (546)
Q Consensus 152 IlrAPRgdgtEAIVL~ap~~~~~~~-----------------~~~~~gval~LaL~~yl~r~~-~waKDIIfl~~D~~~g 213 (546)
++.+ ++| -.|++.+++|.--.+ -+-..+++.+++.++.|++.. .+..+|.|+|+-++++
T Consensus 96 ~~g~--~~g-~~i~l~~h~DaVp~~e~~~~~~~p~~~G~~hacGhkg~~A~~l~Aa~~L~~~~~~~~g~V~~if~pdEE~ 172 (437)
T PLN02693 96 YIGT--GEP-PFVALRADMDALPIQEAVEWEHKSKIPGKMHACGHDGHVAMLLGAAKILQEHRHHLQGTVVLIFQPAEEG 172 (437)
T ss_pred EECC--CCC-CEEEEEeecCCCcCCCCCCCCCCCCCCCCEECCcchHHHHHHHHHHHHHHhCcccCCceEEEEEEEcccc
Confidence 9843 122 579999988764210 011246788888888887653 4678999999766554
Q ss_pred CchhHHHHHHhh
Q 009044 214 EYAPVAAWLRDY 225 (546)
Q Consensus 214 ~~~G~~AWL~~Y 225 (546)
..|.+..+++.
T Consensus 173 -~~Ga~~~i~~g 183 (437)
T PLN02693 173 -LSGAKKMREEG 183 (437)
T ss_pred -hhhHHHHHHCC
Confidence 36899998873
No 55
>PF05450 Nicastrin: Nicastrin; InterPro: IPR008710 Nicastrin and presenilin are two major components of the gamma-secretase complex, which executes the intramembrane proteolysis of type I integral membrane proteins such as the amyloid precursor protein (APP) and Notch. Nicastrin is synthesised in fibroblasts and neurons as an endoglycosidase-H-sensitive glycosylated precursor protein (immature nicastrin) and is then modified by complex glycosylation in the Golgi apparatus and by sialylation in the trans-Golgi network (mature nicastrin) [].; GO: 0016485 protein processing, 0016021 integral to membrane
Probab=94.85 E-value=0.52 Score=47.70 Aligned_cols=122 Identities=11% Similarity=0.139 Sum_probs=75.7
Q ss_pred EEEEEeecCC-------CCCCcchhhHHHHHHHHHHHhcC----CCCCcceEEEeeCCCCCCchhHHHHHHhhcCCCCCC
Q 009044 164 IVLVTPYNAV-------KGGVRETLSLGIAYSVFSLLTRV----TWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSN 232 (546)
Q Consensus 164 IVL~ap~~~~-------~~~~~~~~gval~LaL~~yl~r~----~~waKDIIfl~~D~~~g~~~G~~AWL~~YH~~~~~~ 232 (546)
|++++.+|+. -|+.....|+..+||.++.|++. .-+.|+|+|+|.++|.=++.|-+.||.+-....+..
T Consensus 3 Ilv~armDs~s~F~~~s~GA~s~~sglvaLLaaA~aL~~~~~~~~~~~knV~F~~F~GEs~dYiGS~R~vyDm~~~~f~~ 82 (234)
T PF05450_consen 3 ILVVARMDSFSFFHDLSPGADSSVSGLVALLAAAEALSKLLPDSSNLNKNVLFAFFNGESFDYIGSSRFVYDMQNGNFPS 82 (234)
T ss_pred EEEEecccchhcccCCCCCcccchHHHHHHHHHHHHHHHhhhccccccCcEEEEEecCccccccchHHHHHHHHcCcCcc
Confidence 5677777764 24444578999999999988765 356899999999987657899999999987654320
Q ss_pred CCCcccccccCCCCCcccccccccccccceeeeEEEEecCCCCCC-ceEEEEeecCCCCCCChhHHHHHHHHH
Q 009044 233 LDSLNTETCHVGNNNFESKISYGIRRSGTMAAALVLGVAYGNENE-DTLGIYAEASNGQMPNLDLINIVHYLA 304 (546)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~raG~I~aAlvle~~~~~~~~-~~l~I~~eG~NGqLPNLDLiN~v~~ia 304 (546)
+. .+. .. .+-..|...| |+..-+... +.+-+.+.+.+++--+..+.+.+.+++
T Consensus 83 -~~----~~~-----------~~-i~~~~I~~~I--Elgqvg~~~~~~l~~Hvd~~~~~~~~~~~~~~l~~~~ 136 (234)
T PF05450_consen 83 -DS----LQF-----------QP-ISLDNIDSVI--ELGQVGLSNSSGLYAHVDSPSNSSVANQVDEALDAAA 136 (234)
T ss_pred -cc----ccc-----------cc-ccHHHCCEEE--EeeccCCCCCCCEEEEecCCccchhhHHHHHHHHHHH
Confidence 00 000 00 1223466655 555554322 246666666555544444455454444
No 56
>PRK07318 dipeptidase PepV; Reviewed
Probab=94.77 E-value=0.36 Score=52.98 Aligned_cols=117 Identities=15% Similarity=0.221 Sum_probs=72.2
Q ss_pred HHHHHHHHHhhhcCCCC-----------CccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCcc
Q 009044 74 ANKLIKELNNLHSNPLG-----------ATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTR 142 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~-----------~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~ 142 (546)
+.++.++|-+.+..+.+ +..+..+||+++++++|+++....
T Consensus 16 ~~~~l~~lv~i~S~~~~~~~~~~~p~~~~~~~~~~~l~~~~~~~G~~~~~~~---------------------------- 67 (466)
T PRK07318 16 LIEDLQELLRINSVRDDSKAKEGAPFGPGPVKALEKFLEIAERDGFKTKNVD---------------------------- 67 (466)
T ss_pred HHHHHHHHhccCcccCCcccccCCCCCccHHHHHHHHHHHHHHCCCEEEEec----------------------------
Confidence 34555566555554322 123578999999999999866432
Q ss_pred ccccceEEEEEeCCCCCCceEEEEEEeecCC----------------------CCCCcchhhHHHHHHHHHHHhcCC-CC
Q 009044 143 SLYGINTVGIIRAPRGDGKEAIVLVTPYNAV----------------------KGGVRETLSLGIAYSVFSLLTRVT-WL 199 (546)
Q Consensus 143 ~~~G~NvygIlrAPRgdgtEAIVL~ap~~~~----------------------~~~~~~~~gval~LaL~~yl~r~~-~w 199 (546)
|+++.++. +.+...++|..|.|.. +|..|...+++.++..++.+++.. -+
T Consensus 68 -----n~~~~~~~--~~~~~~l~l~gH~DvVp~~~~W~~~Pf~~~~~dg~lyGRG~~DmKgg~aa~l~Al~~l~~~g~~~ 140 (466)
T PRK07318 68 -----NYAGHIEY--GEGEEVLGILGHLDVVPAGDGWDTDPYEPVIKDGKIYARGTSDDKGPTMAAYYALKIIKELGLPL 140 (466)
T ss_pred -----CccceEEE--CCCCCEEEEEEecCCCCCCCCCCCCCcceEEECCEEEEcccccCcHHHHHHHHHHHHHHHcCCCC
Confidence 23333321 2334457776655442 222344667887777777776543 45
Q ss_pred CcceEEEeeCCCCCCchhHHHHHHhh
Q 009044 200 AKDIIWLVADSQYGEYAPVAAWLRDY 225 (546)
Q Consensus 200 aKDIIfl~~D~~~g~~~G~~AWL~~Y 225 (546)
.++|.|+|+=+++.+..|++.+++.+
T Consensus 141 ~~~i~l~~~~DEE~g~~G~~~l~~~~ 166 (466)
T PRK07318 141 SKKVRFIVGTDEESGWKCMDYYFEHE 166 (466)
T ss_pred CccEEEEEEcccccCchhHHHHHHhC
Confidence 78999999644444557999999874
No 57
>TIGR03526 selenium_YgeY putative selenium metabolism hydrolase. SelD, selenophosphate synthase, is the selenium donor protein for both selenocysteine and selenouridine biosynthesis systems, but it occurs also in a few prokaryotes that have neither of those pathways. The method of partial phylogenetic profiling, starting from such orphan-selD genomes, identifies this protein as one of those most strongly correlated to SelD occurrence. Its distribution is also well correlated with that of family TIGR03309, a putative accessory protein of labile selenium (non-selenocysteine) enzyme maturation. This family includes the uncharacterized YgeY of Escherichia coli, and belongs to a larger family of metalloenzymes in which some are known peptidases, others enzymes of different types.
Probab=94.52 E-value=0.67 Score=49.57 Aligned_cols=116 Identities=11% Similarity=0.044 Sum_probs=72.2
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEE
Q 009044 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIl 153 (546)
..++.++|-+...-+.+. ....+||.++|+++|+++.... ...|+++.+
T Consensus 15 ~~~~l~~Lv~ips~s~~e-~~~~~~l~~~l~~~g~~~~~~~------------------------------~~~~v~~~~ 63 (395)
T TIGR03526 15 MIRFLRDLVAIPSESGDE-GRVALRIKQEMEKLGFDKVEID------------------------------PMGNVLGYI 63 (395)
T ss_pred HHHHHHHHhcCCCCCCch-HHHHHHHHHHHHHcCCceEEEc------------------------------CCCcEEEEe
Confidence 445555665555544332 3678999999999998742110 013788877
Q ss_pred eCCCCCCceEEEEEEeecCCC------------------------CCCcchhhHHHHHHHHHHHhcCCC-CCcceEEEee
Q 009044 154 RAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVA 208 (546)
Q Consensus 154 rAPRgdgtEAIVL~ap~~~~~------------------------~~~~~~~gval~LaL~~yl~r~~~-waKDIIfl~~ 208 (546)
. ++...+++.+++|... |..|...+++.++..++.+++... ..+|++++++
T Consensus 64 g----~~~~~l~l~~H~DtVp~~~~~~W~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~a~~~l~~~~~~~~~~v~~~~~ 139 (395)
T TIGR03526 64 G----HGPKLIAMDAHIDTVGIGDMDQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGT 139 (395)
T ss_pred C----CCCCEEEEEeeccccCCCCcccccCCCCceEEECCEEEecCccccchhHHHHHHHHHHHHHcCCCCCceEEEEEe
Confidence 2 3446788988886531 112235678888888887776543 4679989887
Q ss_pred CCCC-CCchhHHHHHHh
Q 009044 209 DSQY-GEYAPVAAWLRD 224 (546)
Q Consensus 209 D~~~-g~~~G~~AWL~~ 224 (546)
.+++ +.-.|.+..+++
T Consensus 140 ~dEE~~~g~~~~~~~~~ 156 (395)
T TIGR03526 140 VQEEDCDGLCWQYIIEE 156 (395)
T ss_pred cccccCCcHhHHHHHhc
Confidence 5444 223455666665
No 58
>PRK07079 hypothetical protein; Provisional
Probab=94.07 E-value=0.88 Score=49.98 Aligned_cols=126 Identities=10% Similarity=-0.007 Sum_probs=78.3
Q ss_pred HHHHHHHHHhhhcCCCC--CccchHHHH----HHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccc
Q 009044 74 ANKLIKELNNLHSNPLG--ATTESHGII----AKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGI 147 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~--~~~~~~~~I----~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~ 147 (546)
+.++.++|-+..+.+.. ...+.++|+ .++|+++|+++..+.... .....
T Consensus 19 ~~~~L~~LV~ipSvs~~~~~~~~~~~~l~~~~~~~l~~~G~~~~~~~~~~-------------------------~~~~~ 73 (469)
T PRK07079 19 FFADLARRVAYRTESQNPDRAPALRAYLTDEIAPALAALGFTCRIVDNPV-------------------------AGGGP 73 (469)
T ss_pred HHHHHHHHhccCCCCCCcccHHHHHHHHHHHHHHHHHHCCCeEEEEecCC-------------------------CCCCC
Confidence 44555566555554431 122445555 558999999987654110 01236
Q ss_pred eEEEEEeCCCCCCceEEEEEEeecCCC-------------------------CCCcchhhHHHHHHHHHHHhc-C-CCCC
Q 009044 148 NTVGIIRAPRGDGKEAIVLVTPYNAVK-------------------------GGVRETLSLGIAYSVFSLLTR-V-TWLA 200 (546)
Q Consensus 148 NvygIlrAPRgdgtEAIVL~ap~~~~~-------------------------~~~~~~~gval~LaL~~yl~r-~-~~wa 200 (546)
||++.+.+ +.+...++|..|+|..- |..|...+++..++.++.+.+ . .-+.
T Consensus 74 ~vva~~~~--~~~~~~lll~gH~DvVp~~~~~W~~~~~Pf~~~~~dg~lyGRGa~DmKgg~aa~l~A~~~l~~~~~~~~~ 151 (469)
T PRK07079 74 FLIAERIE--DDALPTVLIYGHGDVVRGYDEQWREGLSPWTLTEEGDRWYGRGTADNKGQHTINLAALEQVLAARGGRLG 151 (469)
T ss_pred EEEEEeCC--CCCCCEEEEEcccCCCCCChHHhcccCCCCcccccCCEEEEEeccCCcHHHHHHHHHHHHHHHhcCCCCC
Confidence 89988743 12235799988876431 112446778877777776643 2 3457
Q ss_pred cceEEEeeCCCCCCchhHHHHHHhhc
Q 009044 201 KDIIWLVADSQYGEYAPVAAWLRDYH 226 (546)
Q Consensus 201 KDIIfl~~D~~~g~~~G~~AWL~~YH 226 (546)
.+|.|+++-+++.+..|++.+++++.
T Consensus 152 ~~i~~~~~~dEE~g~~G~~~l~~~~~ 177 (469)
T PRK07079 152 FNVKLLIEMGEEIGSPGLAEVCRQHR 177 (469)
T ss_pred CCEEEEEECccccCCccHHHHHHHhH
Confidence 89999997555556679999999864
No 59
>TIGR01246 dapE_proteo succinyl-diaminopimelate desuccinylase, proteobacterial clade. This model describes a proteobacterial subset of succinyl-diaminopimelate desuccinylases. An experimentally confirmed Gram-positive lineage succinyl-diaminopimelate desuccinylase has been described for Corynebacterium glutamicum, and a neighbor-joining tree shows the seed members, SP:Q59284, and putative archaeal members such as TrEMBL:O58003 in a single clade. However, the archaeal members differ substantially, share a number of motifs with acetylornithine deacetylases rather than succinyl-diaminopimelate desuccinylases, and are not taken as trusted examples of succinyl-diaminopimelate desuccinylases. This model is limited to proteobacterial members for this reason.
Probab=93.83 E-value=0.86 Score=48.08 Aligned_cols=114 Identities=18% Similarity=0.151 Sum_probs=69.8
Q ss_pred HHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCC
Q 009044 77 LIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAP 156 (546)
Q Consensus 77 y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAP 156 (546)
+.++|-+....+.+. ...++||.++|+++|+++..++.. ...|+++.. +
T Consensus 4 ~l~~lv~ips~s~~e-~~~~~~i~~~l~~~G~~~~~~~~~----------------------------~~~~~~~~~-g- 52 (370)
T TIGR01246 4 LAKELISRPSVTPND-AGCQDIIAERLEKLGFEIEWMHFG----------------------------DTKNLWATR-G- 52 (370)
T ss_pred HHHHHhcCCCCCcch-HHHHHHHHHHHHHCCCEEEEEecC----------------------------CCceEEEEe-c-
Confidence 445555555544332 367899999999999997765420 124788863 2
Q ss_pred CCCCceEEEEEEeecCCCCC------------------------CcchhhHHHHHHHHH-HHhcCCCCCcceEEEeeCCC
Q 009044 157 RGDGKEAIVLVTPYNAVKGG------------------------VRETLSLGIAYSVFS-LLTRVTWLAKDIIWLVADSQ 211 (546)
Q Consensus 157 RgdgtEAIVL~ap~~~~~~~------------------------~~~~~gval~LaL~~-yl~r~~~waKDIIfl~~D~~ 211 (546)
.+...|++..|+|....+ .|...+++.++..++ +.+...-+.++|+|+|.-++
T Consensus 53 --~~~~~i~~~~H~DtVp~~~~~~W~~~p~~~~~~dg~~yGrG~~D~Kgg~a~~l~a~~~l~~~~~~~~~~v~~~~~~dE 130 (370)
T TIGR01246 53 --TGEPVLAFAGHTDVVPAGPEEQWSSPPFEPVERDGKLYGRGAADMKGSLAAFIVAAERFVKKNPDHKGSISLLITSDE 130 (370)
T ss_pred --CCCcEEEEEccccccCCCCccccccCCCCcEEECCEEEecccccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEecc
Confidence 244679999888763211 122345555554444 45555567889999997545
Q ss_pred CCC-chhHHHHHH
Q 009044 212 YGE-YAPVAAWLR 223 (546)
Q Consensus 212 ~g~-~~G~~AWL~ 223 (546)
+.+ ..|++..++
T Consensus 131 E~~~~~G~~~~~~ 143 (370)
T TIGR01246 131 EGTAIDGTKKVVE 143 (370)
T ss_pred ccCCCcCHHHHHH
Confidence 432 357777665
No 60
>PRK08554 peptidase; Reviewed
Probab=93.66 E-value=1 Score=49.32 Aligned_cols=99 Identities=13% Similarity=0.154 Sum_probs=63.3
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecCC
Q 009044 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (546)
Q Consensus 94 ~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~~ 173 (546)
+..+|+.++|+++|+++..+... ...|+++.+. .+.+.|+|..|+|..
T Consensus 28 ~~~~~l~~~l~~~G~~~~~~~~~----------------------------~~~~l~~~~~----~~~~~l~l~gH~DtV 75 (438)
T PRK08554 28 ECPKFIKDTLESWGIESELIEKD----------------------------GYYAVYGEIG----EGKPKLLFMAHFDVV 75 (438)
T ss_pred HHHHHHHHHHHHCCCeEEEEecC----------------------------CceEEEEEeC----CCCCEEEEEeccccC
Confidence 57899999999999987655310 1247777752 334568888887653
Q ss_pred C-----------------------CCCcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchhHHHHHHhh
Q 009044 174 K-----------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (546)
Q Consensus 174 ~-----------------------~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~~AWL~~Y 225 (546)
- |..|...+++.++..++.+++.. +.++|.|+++-+++.+..+....++.+
T Consensus 76 p~~~~~w~~~Pf~~~~~~g~lyGrG~~DmKgg~aa~l~A~~~l~~~~-~~~~i~l~~~~dEE~g~~~~~~~~~~~ 149 (438)
T PRK08554 76 PVNPEEWNTEPFKLTVKGDKAYGRGSADDKGNVASVMLALKELSKEP-LNGKVIFAFTGDEEIGGAMAMHIAEKL 149 (438)
T ss_pred CCCccccccCCceeEEECCEEEECCcccchHHHHHHHHHHHHHHhcC-CCCCEEEEEEcccccCccccHHHHHHH
Confidence 1 11234567888888888887655 578999999633333333333444443
No 61
>PLN02280 IAA-amino acid hydrolase
Probab=93.41 E-value=1.2 Score=49.41 Aligned_cols=98 Identities=8% Similarity=0.095 Sum_probs=66.6
Q ss_pred cchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecC
Q 009044 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (546)
Q Consensus 93 ~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~ 172 (546)
.+..++|.++|+++|+++..+. .+.|++|++ +. +.+ ..|++.+++|.
T Consensus 117 ~~t~~~i~~~L~~~G~~~~~~~------------------------------~~~~vva~~-g~-~~~-~~I~l~gh~Da 163 (478)
T PLN02280 117 YKTSELVRSELDRMGIMYRYPL------------------------------AKTGIRAWI-GT-GGP-PFVAVRADMDA 163 (478)
T ss_pred HHHHHHHHHHHHHCCCeEEecC------------------------------CCCEEEEEE-CC-CCC-CEEEEEEecCC
Confidence 3578999999999999865321 246999987 31 222 57999888765
Q ss_pred CCCC--------C---------cchhhHHHHHHHHHHHhcCC-CCCcceEEEeeCCCCCCchhHHHHHHh
Q 009044 173 VKGG--------V---------RETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRD 224 (546)
Q Consensus 173 ~~~~--------~---------~~~~gval~LaL~~yl~r~~-~waKDIIfl~~D~~~g~~~G~~AWL~~ 224 (546)
.-.. + +-..++|.++++++++++.. -+.-+|.|+|+-++|.+ .|.++-+++
T Consensus 164 VP~~e~~~w~~~p~~~G~~h~cGhd~~~A~~l~a~~~L~~~~~~~~g~V~~if~pdEE~g-~Ga~~li~~ 232 (478)
T PLN02280 164 LPIQEAVEWEHKSKVAGKMHACGHDAHVAMLLGAAKILKSREHLLKGTVVLLFQPAEEAG-NGAKRMIGD 232 (478)
T ss_pred CcccCCCCCCCCCCCCCeEEeCCCcHHHHHHHHHHHHHHhccccCCceEEEEeccccccc-chHHHHHHC
Confidence 3210 0 01237788888889887543 34669999997655544 488888876
No 62
>TIGR03320 ygeY M20/DapE family protein YgeY. Members of this protein family, including the YgeY protein of Escherichia coli, typically are found in extended genomic regions associated with purine catabolism. Homologs include peptidases and deacylases of the M20/M25 /M40 and DapE/ArgE families. The function is unknown.
Probab=92.93 E-value=1.7 Score=46.35 Aligned_cols=116 Identities=11% Similarity=0.056 Sum_probs=69.9
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEE
Q 009044 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIl 153 (546)
..++.++|-+.+..+.+ .....+||.++|+++|+++.... ...|++|.+
T Consensus 15 ~~~~~~~lv~i~s~s~~-e~~~~~~l~~~l~~~G~~~~~~~------------------------------~~~n~~~~~ 63 (395)
T TIGR03320 15 MIRFLRDLVAIPSESGD-EKRVAERIKEEMEKLGFDKVEID------------------------------PMGNVLGYI 63 (395)
T ss_pred HHHHHHHHHcCCCCCCc-hHHHHHHHHHHHHHhCCcEEEEC------------------------------CCCCEEEEe
Confidence 44555566555554433 23678999999999998742110 013788876
Q ss_pred eCCCCCCceEEEEEEeecCCC------------------------CCCcchhhHHHHHHHHHHHhcCC-CCCcceEEEee
Q 009044 154 RAPRGDGKEAIVLVTPYNAVK------------------------GGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVA 208 (546)
Q Consensus 154 rAPRgdgtEAIVL~ap~~~~~------------------------~~~~~~~gval~LaL~~yl~r~~-~waKDIIfl~~ 208 (546)
. .+...+++.+|+|... |..|...+++.++..++.+++.. .+..+|+++++
T Consensus 64 g----~~~~~l~l~~H~DtVp~~~~~~w~~~Pf~~~~~~g~lyGrG~~D~Kg~~aa~l~A~~~l~~~g~~~~~~i~~~~~ 139 (395)
T TIGR03320 64 G----HGPKLIAMDAHIDTVGIGDSKQWQFDPYEGYEDEEIIYGRGASDQEGGIASMVYAGKIIKDLGLLDDYTLLVTGT 139 (395)
T ss_pred C----CCCcEEEEEecccccCCCCccccccCCCceEEECCEEEecCccCccchHHHHHHHHHHHHHcCCCCCceEEEEec
Confidence 2 2335688888876531 12233567888888888887643 35678988886
Q ss_pred CCCC-CCchhHHHHHHh
Q 009044 209 DSQY-GEYAPVAAWLRD 224 (546)
Q Consensus 209 D~~~-g~~~G~~AWL~~ 224 (546)
.+++ ++-.+.+..+++
T Consensus 140 ~dEE~~~g~~~~~~~~~ 156 (395)
T TIGR03320 140 VQEEDCDGLCWQYIIEE 156 (395)
T ss_pred ccccccCchHHHHHHHh
Confidence 4333 222344455544
No 63
>TIGR01886 dipeptidase dipeptidase PepV. This model represents a small clade of dipeptidase enzymes which are members of the larger M25 subfamily of metalloproteases. Two characterized enzymes are included in the seed. One, from Lactococcus lactis has been shown to act on a wide range of dipeptides, but not larger peptides. The enzyme from Lactobacillus delbrueckii was originally characterized as a Xaa-His dipeptidase, specifically a carnosinase (beta-Ala-His) by complementation of an E. coli mutant. Further study, including the crystallization of the enzyme, has shown it to also be a non-specific dipeptidase. This group also includes enzymes from Streptococcus and Enterococcus.
Probab=92.62 E-value=1.6 Score=48.05 Aligned_cols=96 Identities=16% Similarity=0.253 Sum_probs=62.8
Q ss_pred hHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecCC-
Q 009044 95 SHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV- 173 (546)
Q Consensus 95 ~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~~- 173 (546)
..+|+.++|+++|+++..+. |++|.+.. +++.+.+++..|+|..
T Consensus 47 ~~~~~~~~~~~~G~~~~~~~---------------------------------~~~~~~~~--~~~~~~l~~~gH~DvVp 91 (466)
T TIGR01886 47 ALTKFLSFAERDGFTTKNFD---------------------------------NYAGHVEY--GAGDERLGIIGHMDVVP 91 (466)
T ss_pred HHHHHHHHHHHCCCeEEEec---------------------------------CCceeEEe--cCCCCEEEEEeecccCC
Confidence 55788999999999876432 11111111 2445678888877653
Q ss_pred ---------------------CCCCcchhhHHHHHHHHHHHhcCC-CCCcceEEEeeCCCCCCchhHHHHHHhh
Q 009044 174 ---------------------KGGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (546)
Q Consensus 174 ---------------------~~~~~~~~gval~LaL~~yl~r~~-~waKDIIfl~~D~~~g~~~G~~AWL~~Y 225 (546)
+|..|...+++.++..++.+++.. -+.+||.|++.-+++.+..|++.++++.
T Consensus 92 ~~~~W~~~Pf~~~~~dg~lyGRG~~D~Kg~~~a~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~~~~~ 165 (466)
T TIGR01886 92 AGEGWTRDPFEPEIDEGRIYARGASDDKGPSLAAYYAMKILKELGLPPSKKIRFVVGTNEETGWVDMDYYFKHE 165 (466)
T ss_pred CCCCCcCCCCCeEEECCEEEecCccccchHHHHHHHHHHHHHHhCCCCCCCEEEEEECccccCcccHHHHHhcC
Confidence 222344566777766677776543 5688999999744555678999999864
No 64
>TIGR01887 dipeptidaselike dipeptidase, putative. This model represents a clade of probable zinc dipeptidases, closely related to the characterized non-specific dipeptidase, PepV. Many enzymes in this clade have been given names including the terms "Xaa-His" and "carnosinase" due to the early mis-characterization of the Lactobacillus delbrueckii PepV enzyme. These names are likely too specific.
Probab=92.41 E-value=1.7 Score=47.70 Aligned_cols=98 Identities=15% Similarity=0.217 Sum_probs=64.0
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecCC
Q 009044 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNAV 173 (546)
Q Consensus 94 ~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~~ 173 (546)
+..+|+.++|+++|+++.... |+.++.+ .+.+...++|..|+|..
T Consensus 35 ~~~~~l~~~~~~~g~~~~~~~---------------------------------~~~~~~~--~~~~~~~l~l~gH~D~V 79 (447)
T TIGR01887 35 KALDKFLELAKRDGFTTENVD---------------------------------NYAGYAE--YGQGEEYLGILGHLDVV 79 (447)
T ss_pred HHHHHHHHHHHHcCceEEEec---------------------------------CceEEEE--eCCCCCeEEEEeecCCC
Confidence 567899999999999865221 2222222 12334578887776643
Q ss_pred ----------------------CCCCcchhhHHHHHHHHHHHhcCC-CCCcceEEEeeCCCCCCchhHHHHHHhhc
Q 009044 174 ----------------------KGGVRETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (546)
Q Consensus 174 ----------------------~~~~~~~~gval~LaL~~yl~r~~-~waKDIIfl~~D~~~g~~~G~~AWL~~YH 226 (546)
+|..+...+++.++..++.|++.. -+..+|.|+++-+++.+..|++.+++..+
T Consensus 80 p~~~~W~~~Pf~~~~~~g~lyGRGa~D~KG~laa~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~g~~~~l~~~~ 155 (447)
T TIGR01887 80 PAGDGWTSPPFEAEIKDGRIYGRGTLDDKGPTIAALYAMKILKELGLKLKKKIRFIFGTDEETGWACIDYYFEHEE 155 (447)
T ss_pred CCCCCCcCCCCceEEECCEEEECCcccCcHHHHHHHHHHHHHHHcCCCCCCcEEEEEECCcccCcHhHHHHHHhcC
Confidence 122344566777777777776543 34789999997555566789999998643
No 65
>KOG2526 consensus Predicted aminopeptidases - M20/M25/M40 family [Amino acid transport and metabolism]
Probab=91.83 E-value=0.6 Score=50.86 Aligned_cols=80 Identities=20% Similarity=0.373 Sum_probs=58.9
Q ss_pred cccceEEEEEe-CCC--CCC--ceEEEEEEeecCC-------CCCCcchhhHHHHHHHHHHHhcC-----CCCCcceEEE
Q 009044 144 LYGINTVGIIR-APR--GDG--KEAIVLVTPYNAV-------KGGVRETLSLGIAYSVFSLLTRV-----TWLAKDIIWL 206 (546)
Q Consensus 144 ~~G~NvygIlr-APR--gdg--tEAIVL~ap~~~~-------~~~~~~~~gval~LaL~~yl~r~-----~~waKDIIfl 206 (546)
..=.||.|.+. |-| ||| --.|++|++||.- -|++.+.+|+..+|.|++.|++- +-=.-++.|+
T Consensus 191 ~ki~nI~G~L~~glra~~dg~~lPtIaivA~ydtfgaap~lsvgADSNGSGvvaLLelarlfSkly~ypsTrakYnLlF~ 270 (555)
T KOG2526|consen 191 YKILNIVGRLSSGLRAEGDGSALPTIAIVAHYDTFGAAPGLSVGADSNGSGVVALLELARLFSKLYDYPSTRAKYNLLFI 270 (555)
T ss_pred CccceEEeecccccccccccccCCeEEEEEeccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHhcCcccccceeEEEE
Confidence 45579999998 666 333 4579999999874 23344567888889999988642 1114589999
Q ss_pred eeCCCCCCchhHHHHHH
Q 009044 207 VADSQYGEYAPVAAWLR 223 (546)
Q Consensus 207 ~~D~~~g~~~G~~AWL~ 223 (546)
.+++.--.+.|.+-||+
T Consensus 271 lt~aG~lNyqGTkkWLe 287 (555)
T KOG2526|consen 271 LTAAGKLNYQGTKKWLE 287 (555)
T ss_pred EccCccccccchhhhhh
Confidence 99985556899999999
No 66
>KOG2195 consensus Transferrin receptor and related proteins containing the protease-associated (PA) domain [Posttranslational modification, protein turnover, chaperones; Inorganic ion transport and metabolism; General function prediction only]
Probab=91.44 E-value=0.58 Score=54.31 Aligned_cols=83 Identities=11% Similarity=0.129 Sum_probs=63.5
Q ss_pred cccceEEEEEeCCCCCCceEEEEEEeecCCCC-CCcchhhHHHHHHHHHHHh----c-CCCCCcceEEEeeCCCCCCchh
Q 009044 144 LYGINTVGIIRAPRGDGKEAIVLVTPYNAVKG-GVRETLSLGIAYSVFSLLT----R-VTWLAKDIIWLVADSQYGEYAP 217 (546)
Q Consensus 144 ~~G~NvygIlrAPRgdgtEAIVL~ap~~~~~~-~~~~~~gval~LaL~~yl~----r-~~~waKDIIfl~~D~~~g~~~G 217 (546)
..=.||+|.+++ +...--.+||-+|.|+... +.+.+.|.++++.++++++ + |+. .|.|+|..=|+++.++.|
T Consensus 336 ~ki~NIig~I~G-s~epD~~ViigahrDSw~~Ga~dp~sGta~Ll~i~~~~~~~~k~gwrP-~RtI~F~sWdAeEfGliG 413 (702)
T KOG2195|consen 336 TKIQNIIGKIEG-SEEPDRYVIIGAHRDSWTFGAIDPNSGTALLLEIARALSKLKKRGWRP-RRTILFASWDAEEFGLLG 413 (702)
T ss_pred eeeeeEEEEEec-CcCCCeEEEEeccccccccCCcCCCccHHHHHHHHHHHHHHHHcCCCc-cceEEEEEccchhccccc
Confidence 566899999998 3455567788888888753 3445678888888888663 2 333 689999999999889999
Q ss_pred HHHHHHhhcCC
Q 009044 218 VAAWLRDYHTP 228 (546)
Q Consensus 218 ~~AWL~~YH~~ 228 (546)
.-.|+++|-..
T Consensus 414 StE~~E~~~~~ 424 (702)
T KOG2195|consen 414 STEWAEEYLKN 424 (702)
T ss_pred cHHHHHHHHHH
Confidence 99999998653
No 67
>TIGR01900 dapE-gram_pos succinyl-diaminopimelate desuccinylase. This enzyme is involved in the biosynthesis of lysine, and is related to the enzyme acetylornithine deacetylase and other amidases and peptidases found within pfam01546.
Probab=89.76 E-value=2.5 Score=45.03 Aligned_cols=112 Identities=13% Similarity=0.118 Sum_probs=69.3
Q ss_pred HHHhhhcCCCCCccchHHHHHHHHHhcCCc-eeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCC
Q 009044 80 ELNNLHSNPLGATTESHGIIAKYMSNLGAQ-VNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRG 158 (546)
Q Consensus 80 el~~~~~~~~~~~~~~~~~I~~~l~~lGle-~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRg 158 (546)
+|-+..+.+.+ ..+..++|.++|+++|.+ +..+ ..+.|+++.+.+ +
T Consensus 4 ~Lv~ipS~s~~-e~~~~~~i~~~l~~~g~~~~~~~------------------------------~~~~nvva~~~~--~ 50 (373)
T TIGR01900 4 QIMDIFSPSDH-EGPIADEIEAALNNLELEGLEVF------------------------------RFGDNVLARTDF--G 50 (373)
T ss_pred HHhCCCCCCch-HHHHHHHHHHHHhhccccCceEE------------------------------EECCEEEEecCC--C
Confidence 44444443332 236789999999999754 1111 123489988643 2
Q ss_pred CCceEEEEEEeecCCC----------------------------------CCCcchhhHHHHHHHHHHHhc---CCCCCc
Q 009044 159 DGKEAIVLVTPYNAVK----------------------------------GGVRETLSLGIAYSVFSLLTR---VTWLAK 201 (546)
Q Consensus 159 dgtEAIVL~ap~~~~~----------------------------------~~~~~~~gval~LaL~~yl~r---~~~waK 201 (546)
. ...|+|..|+|... |..|...|++.+++.++.+.+ ..-+..
T Consensus 51 ~-~~~l~l~gH~DtVp~~~~~~~~W~~~p~~~~~~~~~~~~~~~g~lyGRGa~DmKgg~aa~l~a~~~l~~~~~~~~~~~ 129 (373)
T TIGR01900 51 K-ASRVILAGHIDTVPIADNFPPKWLEPGDSLIREEIAHAHPEDGILWGCGATDMKAGDAVMLHLAATLDGRAPETELKH 129 (373)
T ss_pred C-CCeEEEeCccccccCCCCChhhhccCcccccccccccccccCCEEEecCchhhhHHHHHHHHHHHHHhhhccccCCCC
Confidence 2 24599987776431 111334678888888887732 224588
Q ss_pred ceEEEeeCCCCCC--chhHHHHHHhh
Q 009044 202 DIIWLVADSQYGE--YAPVAAWLRDY 225 (546)
Q Consensus 202 DIIfl~~D~~~g~--~~G~~AWL~~Y 225 (546)
||.|+++.+++.+ ..|+...++++
T Consensus 130 ~i~~~~~~dEE~~~~~~G~~~~~~~~ 155 (373)
T TIGR01900 130 DLTLIAYDCEEVAAEKNGLGHIRDAH 155 (373)
T ss_pred CEEEEEEecccccCCCCCHHHHHHhC
Confidence 9999997655432 35899988873
No 68
>COG4187 RocB Arginine degradation protein (predicted deacylase) [Amino acid transport and metabolism]
Probab=89.40 E-value=5.9 Score=43.69 Aligned_cols=134 Identities=14% Similarity=0.165 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHhhhcCCCCC-ccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEE
Q 009044 72 SEANKLIKELNNLHSNPLGA-TTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTV 150 (546)
Q Consensus 72 ~~a~~y~~el~~~~~~~~~~-~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~Nvy 150 (546)
++++++.-+|-.+.+-.+.. .....++|...+.++ .|.|+ ||-..+..+ .+|- .....||+
T Consensus 8 e~v~~lt~~LV~~~SvtgT~GE~a~ad~l~~vL~~~---pYFqe--------hped~~~~p-----i~nD--pygR~nv~ 69 (553)
T COG4187 8 ERVRALTLSLVSWPSVTGTPGEGAFADRLLGVLGEL---PYFQE--------HPEDLWLQP-----IHND--PYGRRNVF 69 (553)
T ss_pred HHHHHHHHHHeeccccCCCcccccHHHHHHHHHhcC---chhhh--------ChHhhcccC-----CCCC--ccccceeE
Confidence 45677777776666543321 124677887777666 45444 121111110 1121 23457999
Q ss_pred EEEeCCCCCCceEEEEEEeecCCC---------------------------------------------CCCcchhhHHH
Q 009044 151 GIIRAPRGDGKEAIVLVTPYNAVK---------------------------------------------GGVRETLSLGI 185 (546)
Q Consensus 151 gIlrAPRgdgtEAIVL~ap~~~~~---------------------------------------------~~~~~~~gval 185 (546)
|.+|+ +.++-.+|+..+||... |..+-.+|+|.
T Consensus 70 AlVrg--~~~k~tvvl~gH~DtV~iedYg~lKd~Afdp~~ll~~~i~~~e~~~erv~~Dl~SGDwlfGRGa~DMKsGlav 147 (553)
T COG4187 70 ALVRG--GTSKRTVVLHGHFDTVSIEDYGELKDLAFDPLALLDALIESLELREERVLRDLESGDWLFGRGALDMKSGLAV 147 (553)
T ss_pred EEEec--CCCCceEEEeeccceeecccccchhhhccCHHHHHHHHHHhhccCHHHHhhhhhccCcccCCCchhhhhhhHH
Confidence 99999 88889999999997641 11122468888
Q ss_pred HHHHHHHHhcCCCCCcceEEEeeCCCCCCchhHHHHHHhh
Q 009044 186 AYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDY 225 (546)
Q Consensus 186 ~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~~AWL~~Y 225 (546)
.++..+-|....-..=++.|+..-.++-++.||++=+.+-
T Consensus 148 ~la~L~~fa~~~~~~GNlLf~a~pdEE~~s~G~r~a~~~L 187 (553)
T COG4187 148 HLACLEEFAARTDRQGNLLFMAVPDEEVESRGMREARPAL 187 (553)
T ss_pred HHHHHHHHhhCCCCCCcEEEEeccchhhhcccHHHHHHHH
Confidence 8888777765577788999998644556778888876663
No 69
>PRK06156 hypothetical protein; Provisional
Probab=88.73 E-value=7.6 Score=43.50 Aligned_cols=51 Identities=20% Similarity=0.245 Sum_probs=36.4
Q ss_pred cchhhHHHHHHHHHHHhcCC-CCCcceEEEeeCCCCCCchhHHHHHHhhcCC
Q 009044 178 RETLSLGIAYSVFSLLTRVT-WLAKDIIWLVADSQYGEYAPVAAWLRDYHTP 228 (546)
Q Consensus 178 ~~~~gval~LaL~~yl~r~~-~waKDIIfl~~D~~~g~~~G~~AWL~~YH~~ 228 (546)
+...+++.++..++.+.+.. -+.++|.|+|+-+++.+..|++.++++++.+
T Consensus 154 D~Kgg~a~~l~a~~~l~~~~~~~~~~i~~~~~~dEE~g~~G~~~~~~~~~~~ 205 (520)
T PRK06156 154 DDKGAIVTALYAMKAIKDSGLPLARRIELLVYTTEETDGDPLKYYLERYTPP 205 (520)
T ss_pred cchHHHHHHHHHHHHHHHcCCCCCceEEEEEecccccCchhHHHHHHhcCCC
Confidence 34567888877677776543 3578999999744455567999999987643
No 70
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=85.99 E-value=12 Score=40.02 Aligned_cols=99 Identities=6% Similarity=-0.023 Sum_probs=66.6
Q ss_pred cchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCcccccccCCCCCcccccccccc
Q 009044 178 RETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIR 257 (546)
Q Consensus 178 ~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~~AWL~~YH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (546)
++-.|+++++.+++.+++.+ ...|++++||=.++-+..|++. .+|+-.+
T Consensus 178 DdR~g~a~l~e~l~~l~~~~-~~~~l~~~~tvqEEvG~rGA~~--aa~~i~p---------------------------- 226 (350)
T TIGR03107 178 DNRYGVLMILELLESLKDQE-LPNTLIAGANVQEEVGLRGAHV--STTKFNP---------------------------- 226 (350)
T ss_pred ccHHHHHHHHHHHHHhhhcC-CCceEEEEEEChhhcCchhhhh--HHhhCCC----------------------------
Confidence 45679999999999997665 4789999999766666777764 3444211
Q ss_pred cccceeeeEEEEecCCCCCCc--------eEEEEeecCCCCCCChhHHHHHHHHHhhccCceEEE
Q 009044 258 RSGTMAAALVLGVAYGNENED--------TLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKV 314 (546)
Q Consensus 258 raG~I~aAlvle~~~~~~~~~--------~l~I~~eG~NGqLPNLDLiN~v~~ia~~~~g~~v~l 314 (546)
-.||++|+...++.+. -.-|. -.-.|-.+|-.+..-+..+|. +.|+++..
T Consensus 227 -----D~aI~vDv~~~~d~~~~~~~~lg~Gp~i~-~~D~~~i~~~~l~~~l~~~A~-~~~I~~Q~ 284 (350)
T TIGR03107 227 -----DIFFAVDCSPAGDIYGDQGGKLGEGTLLR-FFDPGHIMLPRMKDFLLTTAE-EAGIKYQY 284 (350)
T ss_pred -----CEEEEEecCCcCCCCCCCccccCCCceEE-EecCCCCCCHHHHHHHHHHHH-HcCCCcEE
Confidence 1567777665433221 11121 113488999999999999996 67777765
No 71
>COG1363 FrvX Cellulase M and related proteins [Carbohydrate transport and metabolism]
Probab=84.46 E-value=54 Score=35.40 Aligned_cols=100 Identities=9% Similarity=0.076 Sum_probs=65.8
Q ss_pred cchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCcccccccCCCCCcccccccccc
Q 009044 178 RETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIR 257 (546)
Q Consensus 178 ~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~~AWL~~YH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (546)
+|-.|+++++.++|.++ ..=+..|+.|++|=.++-++.|.+.--.... +
T Consensus 180 DdR~gva~lle~lk~l~-~~~~~~~vy~v~tvqEEVGlrGA~~~a~~i~----------------------------p-- 228 (355)
T COG1363 180 DDRAGVAALLELLKELK-GIELPADVYFVASVQEEVGLRGAKTSAFRIK----------------------------P-- 228 (355)
T ss_pred cchHhHHHHHHHHHHhc-cCCCCceEEEEEecchhhccchhhccccccC----------------------------C--
Confidence 45679999999999995 5566999999999876666666655422211 0
Q ss_pred cccceeeeEEEEecCCCCCCc------------eEEEEeecCCCCCCChhHHHHHHHHHhhccCceEEEeec
Q 009044 258 RSGTMAAALVLGVAYGNENED------------TLGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVEQF 317 (546)
Q Consensus 258 raG~I~aAlvle~~~~~~~~~------------~l~I~~eG~NGqLPNLDLiN~v~~ia~~~~g~~v~l~~~ 317 (546)
-.|+++|+...++.+. .+.++ -++-.-|-+|..-+..+|. +.++++.+.-.
T Consensus 229 -----d~aiavd~~~~~d~~~~~~~~~~lg~Gp~i~~~---D~~~~~~~~l~~~L~~~A~-~~~Ip~Q~~v~ 291 (355)
T COG1363 229 -----DIAIAVDVTPAGDTPGVPKGDVKLGKGPVIRVK---DASGIYHPKLRKFLLELAE-KNNIPYQVDVS 291 (355)
T ss_pred -----CEEEEEecccccCCCCCcccccccCCCCEEEEE---cCCCCCCHHHHHHHHHHHH-HcCCCeEEEec
Confidence 1556666654433211 12222 2333448999999999996 78899988643
No 72
>PRK09864 putative peptidase; Provisional
Probab=83.82 E-value=22 Score=38.28 Aligned_cols=97 Identities=11% Similarity=0.158 Sum_probs=65.3
Q ss_pred cchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCcccccccCCCCCcccccccccc
Q 009044 178 RETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIR 257 (546)
Q Consensus 178 ~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~~AWL~~YH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (546)
++-.|+++++.+++.++. ...|+.+++|=.++-+..|++.=-.... |
T Consensus 175 DnR~g~~~lle~l~~l~~---~~~~vy~v~TvQEEvGlrGA~~aa~~i~-P----------------------------- 221 (356)
T PRK09864 175 DNRIGCAMMAELLQTVNN---PEITLYGVGSVEEEVGLRGAQTSAEHIK-P----------------------------- 221 (356)
T ss_pred ccHHHHHHHHHHHHHhhc---CCCeEEEEEEcchhcchHHHHHHHhcCC-C-----------------------------
Confidence 456799999999998865 6799999999776666677665422211 1
Q ss_pred cccceeeeEEEEecCCCCCCc--e----E------EE-EeecCCCCCCChhHHHHHHHHHhhccCceEEEe
Q 009044 258 RSGTMAAALVLGVAYGNENED--T----L------GI-YAEASNGQMPNLDLINIVHYLAVHRQGLRVKVE 315 (546)
Q Consensus 258 raG~I~aAlvle~~~~~~~~~--~----l------~I-~~eG~NGqLPNLDLiN~v~~ia~~~~g~~v~l~ 315 (546)
..||++|+...++.+. . . -| .+ -.|-++|-.+.+-+..+|. +.|+|+.++
T Consensus 222 -----DiaIavDvt~~~d~p~~~~~~~~~~lG~Gp~i~~~--D~~~i~~~~l~~~l~~~A~-~~~Ip~Q~~ 284 (356)
T PRK09864 222 -----DVVIVLDTAVAGDVPGIDNIKYPLKLGQGPGLMLF--DKRYFPNQKLVAALKSCAA-HNDLPLQFS 284 (356)
T ss_pred -----CEEEEEecccCCCCCCCcccccccccCCCCeEEEc--cCCccCCHHHHHHHHHHHH-HcCCCceEE
Confidence 1367777654333111 1 1 11 11 2389999999999999996 678887764
No 73
>KOG3946 consensus Glutaminyl cyclase [Posttranslational modification, protein turnover, chaperones]
Probab=83.62 E-value=7.6 Score=40.54 Aligned_cols=96 Identities=15% Similarity=0.279 Sum_probs=63.2
Q ss_pred cchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCCCceEEEEEEeecC
Q 009044 93 TESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGDGKEAIVLVTPYNA 172 (546)
Q Consensus 93 ~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgdgtEAIVL~ap~~~ 172 (546)
..+++||++.++.+|-.|..+.|+... | + + ...=.|+++-+.. ...+-+||..+||+
T Consensus 72 ~~vr~~i~~~l~~l~w~ve~~~f~~~t----p-----------~---g--~~~f~nii~tl~~---~A~r~lVlachyds 128 (338)
T KOG3946|consen 72 RQVRRFIIQHLRNLGWAVETDAFTDNT----P-----------L---G--TRNFNNLIATLDP---NASRYLVLACHYDS 128 (338)
T ss_pred HHHHHHHHHHHHhcCceeeeccccccC----c-----------c---e--eeeeeeEEEecCC---Ccchheeeeccccc
Confidence 468999999999999999888876531 1 1 0 2233577777754 56788999999988
Q ss_pred CC-------CCCcchhhHHHHHHHHHHHhcC--CCCCc---ceEEEeeCCC
Q 009044 173 VK-------GGVRETLSLGIAYSVFSLLTRV--TWLAK---DIIWLVADSQ 211 (546)
Q Consensus 173 ~~-------~~~~~~~gval~LaL~~yl~r~--~~waK---DIIfl~~D~~ 211 (546)
.. ++.+.+..-|.++-+++.+.+. +--+| -+.+||.|++
T Consensus 129 k~~p~~~~vgatdsAvpcamll~laq~l~~~~~~~~~~s~lsL~LvFFDGE 179 (338)
T KOG3946|consen 129 KIFPGGMFVGATDSAVPCAMLLNLAQALDKILCSKVSASQLSLQLVFFDGE 179 (338)
T ss_pred ccCCCcceEeeccccccHHHHHHHHHHHHHHHhcccCcCceeEEEEEeccH
Confidence 52 2223334556667777765321 12233 4788999975
No 74
>PF09940 DUF2172: Domain of unknown function (DUF2172); InterPro: IPR012353 The proteins in this entry are encoded by genes located in polysaccharide biosynthesis gene clusters, and are therefore believed to be involved in polysaccharide biosynthesis. The ste gene cluster (for Streptomyces eps) is involved in exopolysaccharide EPS 139A biosynthesis in Streptomyces sp. 139 []. Members of this group exhibit distant sequence similarity to aminopeptidases (IPR007484 from INTERPRO, MEROPS peptidase family M28).; PDB: 3K9T_A.
Probab=82.28 E-value=7.8 Score=41.93 Aligned_cols=64 Identities=14% Similarity=0.067 Sum_probs=44.2
Q ss_pred CCCceEEEEEEeecCCCCCCcchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchhHHHHHHhhc
Q 009044 158 GDGKEAIVLVTPYNAVKGGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYH 226 (546)
Q Consensus 158 gdgtEAIVL~ap~~~~~~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~~AWL~~YH 226 (546)
|+.+|-|+|+++.-+..-+-||.+|++++..|++++++.+-. -..=|||.- +-.|.-+||....
T Consensus 126 G~s~~EillsthiCHPsmANdnLSG~~v~~~La~~L~~~~~r-ytYRflf~P----eTIGsI~yLskn~ 189 (386)
T PF09940_consen 126 GESDEEILLSTHICHPSMANDNLSGPAVLTFLAKWLKQLPNR-YTYRFLFVP----ETIGSITYLSKNL 189 (386)
T ss_dssp -SSS-EEEEEEE----S-TTTTHHHHHHHHHHHHHHTTS--S-SEEEEEEE-----TTHHHHHHHHH-G
T ss_pred CCCCCeEEEEEeccCcccccccccHHHHHHHHHHHHhcCCcC-ceEEEEEcc----ccHHHHHHHHHCH
Confidence 599999999999876655556789999999999999866554 666777764 4589999999843
No 75
>PRK08737 acetylornithine deacetylase; Provisional
Probab=81.94 E-value=17 Score=38.68 Aligned_cols=112 Identities=13% Similarity=0.075 Sum_probs=67.7
Q ss_pred HHHHHHHHHHhhhcCCCC---CccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceE
Q 009044 73 EANKLIKELNNLHSNPLG---ATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINT 149 (546)
Q Consensus 73 ~a~~y~~el~~~~~~~~~---~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~Nv 149 (546)
.+.++.++|-+....+.. ...+..+|+.++|+ |+++...... ....|+
T Consensus 7 ~~~~~l~~Lv~i~s~~~~~~~~e~~~~~~l~~~l~--g~~~~~~~~~---------------------------~~~~nl 57 (364)
T PRK08737 7 STLDHLQALVSFDTRNPPRAITTGGIFDYLRAQLP--GFQVEVIDHG---------------------------AGAVSL 57 (364)
T ss_pred HHHHHHHHHhCCCCcCCCCCCCcHHHHHHHHHHhC--CCEEEEecCC---------------------------CCceEE
Confidence 355666666666554211 12356789999986 8876544310 012588
Q ss_pred EEEEeCCCCCCceEEEEEEeecCCC----------------------CCCcchhhHHHHHHHHHHHhcCCCCCcceEEEe
Q 009044 150 VGIIRAPRGDGKEAIVLVTPYNAVK----------------------GGVRETLSLGIAYSVFSLLTRVTWLAKDIIWLV 207 (546)
Q Consensus 150 ygIlrAPRgdgtEAIVL~ap~~~~~----------------------~~~~~~~gval~LaL~~yl~r~~~waKDIIfl~ 207 (546)
++.. + +..++|..|.|... |..|...+++.+++.++. ...||.|++
T Consensus 58 i~~~----g--~~~lll~gH~DtVp~~~~w~~~Pf~~~~~~g~lyGrGa~DmKg~~aa~l~a~~~------~~~~v~~~~ 125 (364)
T PRK08737 58 YAVR----G--TPKYLFNVHLDTVPDSPHWSADPHVMRRTDDRVIGLGVCDIKGAAAALLAAANA------GDGDAAFLF 125 (364)
T ss_pred EEEc----C--CCeEEEEeeeCCCCCCCCCCCCCCceEEECCEEEEECcccchHHHHHHHHHHHc------cCCCEEEEE
Confidence 8752 2 24699998887642 112224677777666542 246999999
Q ss_pred eCCCCCC-chhHHHHHHhh
Q 009044 208 ADSQYGE-YAPVAAWLRDY 225 (546)
Q Consensus 208 ~D~~~g~-~~G~~AWL~~Y 225 (546)
+-+++.+ ..|++.++++.
T Consensus 126 ~~dEE~g~~~g~~~~~~~~ 144 (364)
T PRK08737 126 SSDEEANDPRCVAAFLARG 144 (364)
T ss_pred EcccccCchhhHHHHHHhC
Confidence 7555544 36899998874
No 76
>KOG2275 consensus Aminoacylase ACY1 and related metalloexopeptidases [Amino acid transport and metabolism]
Probab=77.64 E-value=41 Score=36.93 Aligned_cols=101 Identities=15% Similarity=0.157 Sum_probs=63.2
Q ss_pred chHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCCCC-CceEEEEEEeecC
Q 009044 94 ESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPRGD-GKEAIVLVTPYNA 172 (546)
Q Consensus 94 ~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPRgd-gtEAIVL~ap~~~ 172 (546)
.+++++.++.+++|+.+.+-+..+. . .+++--.++ +| .--+|||++|.|.
T Consensus 49 a~~~Fl~~~a~~l~l~~~~i~~~p~--------------------------~-~~~l~T~~G--S~P~L~silL~SH~DV 99 (420)
T KOG2275|consen 49 ACADFLKKYAKSLGLTVQKIESEPG--------------------------K-YVLLYTWLG--SDPELPSILLNSHTDV 99 (420)
T ss_pred HHHHHHHHHHHhcCCceeEEEecCc--------------------------e-eEEEEEeeC--CCCCccceeeeccccc
Confidence 6899999999999998743322110 1 122222223 34 4678999886653
Q ss_pred C------------------------CCCCcc-hhhHHHHHHHHHHHhcCCCCCcceEEEe-eCCCCCCchhHHHHHH
Q 009044 173 V------------------------KGGVRE-TLSLGIAYSVFSLLTRVTWLAKDIIWLV-ADSQYGEYAPVAAWLR 223 (546)
Q Consensus 173 ~------------------------~~~~~~-~~gval~LaL~~yl~r~~~waKDIIfl~-~D~~~g~~~G~~AWL~ 223 (546)
. +|+-|. ..+++.+-|+-..+.+.--|.|+|..+| +|.+-++..||+-+.+
T Consensus 100 VP~f~e~W~h~Pfsa~~~~~g~IyaRGaqD~K~~~va~leAir~L~~~g~kp~Rti~lsfvpDEEi~G~~Gm~~fa~ 176 (420)
T KOG2275|consen 100 VPVFREKWTHPPFSAFKDEDGNIYARGAQDMKCVGVAYLEAIRNLKASGFKPKRTIHLSFVPDEEIGGHIGMKEFAK 176 (420)
T ss_pred cCCCcccCccCCccccccCCCcEEeccccchHhHHHHHHHHHHHHHhcCCCcCceEEEEecCchhccCcchHHHHhh
Confidence 2 111121 2345544444445555444899999999 5877788999999998
No 77
>PF01546 Peptidase_M20: Peptidase family M20/M25/M40 This family only corresponds to M20 family; InterPro: IPR002933 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of proteins contains the metallopeptidases and non-peptidase homologues (amidohydrolases) that belong to the MEROPS peptidase family M20 (clan MH) []. The peptidases of this clan have two catalytic zinc ions at the active site, bound by His/Asp, Asp, Glu, Asp/Glu and His. The catalysed reaction involves the release of an N-terminal amino acid, usually neutral or hydrophobic, from a polypeptide []. The peptidase M20 family has four sub-families: M20A - type example, glutamate carboxypeptidase from Pseudomonas sp. RS16 (P06621 from SWISSPROT) M20B - type example, peptidase T from Escherichia coli (P29745 from SWISSPROT) M20C - type example, X-His dipeptidase from E. coli (P15288 from SWISSPROT) M20D - type example, carboxypeptidase Ss1 from Sulfolobus solfataricus (P80092 from SWISSPROT) ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3T68_A 3T6M_A 2F8H_A 3GB0_A 3IO1_B 2ZOF_A 2ZOG_B 3MRU_B 3N5F_A 1Z2L_B ....
Probab=74.62 E-value=14 Score=34.45 Aligned_cols=51 Identities=14% Similarity=0.108 Sum_probs=39.5
Q ss_pred CCCCcchhhHHHHHHHHHHHh-cCCCCCcceEEEeeCCCCCCch-hHHHHHHh
Q 009044 174 KGGVRETLSLGIAYSVFSLLT-RVTWLAKDIIWLVADSQYGEYA-PVAAWLRD 224 (546)
Q Consensus 174 ~~~~~~~~gval~LaL~~yl~-r~~~waKDIIfl~~D~~~g~~~-G~~AWL~~ 224 (546)
.|..+...+++..++.++.++ ...-+..+|+|+++-+++.+.. |++.++++
T Consensus 32 rG~~D~k~~~~~~l~a~~~l~~~~~~~~~~i~~~~~~~EE~g~~~g~~~l~~~ 84 (189)
T PF01546_consen 32 RGADDMKGGIAAMLAALKALKESGDDLPGNIIFLFTPDEEIGSIGGAKHLLEE 84 (189)
T ss_dssp TTTTTTHHHHHHHHHHHHHHHHTTTTCSSEEEEEEESTCCGTSTTHHHHHHHH
T ss_pred CCcCCCcccHHHHHHHHHHHHhccccccccccccccccccCCCcchhhhhhhh
Confidence 455555678888888889775 5667799999999755555555 99999998
No 78
>PF05343 Peptidase_M42: M42 glutamyl aminopeptidase; InterPro: IPR008007 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M42 (glutamyl aminopeptidase family, clan MH). For members of this family and family M28 the predicted metal ligands occur in the same order in the sequence: H, D, E, D/E, H; and the active site residues occur in the motifs HXD and EE. ; PDB: 2WYR_C 2CF4_A 1VHO_A 3ISX_A 3KL9_G 1YLO_F 3CPX_C 1VHE_A 2GRE_F 1XFO_A ....
Probab=73.39 E-value=16 Score=38.19 Aligned_cols=100 Identities=13% Similarity=0.179 Sum_probs=66.4
Q ss_pred cchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCcccccccCCCCCcccccccccc
Q 009044 178 RETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIR 257 (546)
Q Consensus 178 ~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~~AWL~~YH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (546)
++-.|+++++.+++.+++..- ..|+.|+||=.++-+..|++.--.+.. |
T Consensus 134 DdR~g~~~lle~l~~l~~~~~-~~~v~~v~tvqEEvG~rGA~~aa~~i~-P----------------------------- 182 (292)
T PF05343_consen 134 DDRAGCAVLLELLRELKEKEL-DVDVYFVFTVQEEVGLRGAKTAAFRIK-P----------------------------- 182 (292)
T ss_dssp HHHHHHHHHHHHHHHHTTSS--SSEEEEEEESSCTTTSHHHHHHHHHH--C-----------------------------
T ss_pred CchhHHHHHHHHHHHHhhcCC-CceEEEEEEeeeeecCcceeecccccC-C-----------------------------
Confidence 346799999999999987654 499999999777777778776544422 2
Q ss_pred cccceeeeEEEEecCCCC--CCc-e-------EEEEeecCCCCCCChhHHHHHHHHHhhccCceEEEe
Q 009044 258 RSGTMAAALVLGVAYGNE--NED-T-------LGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVE 315 (546)
Q Consensus 258 raG~I~aAlvle~~~~~~--~~~-~-------l~I~~eG~NGqLPNLDLiN~v~~ia~~~~g~~v~l~ 315 (546)
..|+++|.....+ ..+ . .-| .-+-.+.+||-++.+-+..+|+ +.|+|+..+
T Consensus 183 -----D~ai~vD~~~a~d~~~~~~~~~~lG~Gp~i-~~~D~~~i~~~~l~~~l~~~A~-~~~Ip~Q~~ 243 (292)
T PF05343_consen 183 -----DIAIAVDVTPAGDTPGSDEKEQGLGKGPVI-RVGDSSMIPNPKLVDKLREIAE-ENGIPYQRE 243 (292)
T ss_dssp -----SEEEEEEEEEESSSTTSTTTTSCTTS-EEE-EEEETTEESHHHHHHHHHHHHH-HTT--EEEE
T ss_pred -----CEEEEEeeeccCCCCCCchhhccCCCCcEE-EEccCCCCCCHHHHHHHHHHHH-HcCCCeEEE
Confidence 1456666653322 111 1 112 2334458999999999999997 678999875
No 79
>KOG4783 consensus Uncharacterized conserved protein [Function unknown]
Probab=69.50 E-value=4 Score=35.78 Aligned_cols=43 Identities=35% Similarity=0.574 Sum_probs=36.2
Q ss_pred hhhhhchhHHHHHHHHHHHhhhccCchhHHHhhhhhc-cCccccccc
Q 009044 462 LDVRGQSLRSILRMICNLVLGVISFPPATFFVFKGVI-EGFSGINAG 507 (546)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 507 (546)
.++...|+...++.||-++++ +|-+.||++|+++ ||.-+||--
T Consensus 20 r~qs~~s~vktlLfy~~lii~---vPiatfF~lK~fvleg~lgis~~ 63 (102)
T KOG4783|consen 20 RIQSSVSIVKTLLFYCSLIIG---VPIATFFALKFFVLEGYLGISEV 63 (102)
T ss_pred hhHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHhcCcchh
Confidence 345567777889999999998 9999999999988 999888743
No 80
>PRK09961 exoaminopeptidase; Provisional
Probab=66.70 E-value=57 Score=34.82 Aligned_cols=100 Identities=15% Similarity=0.153 Sum_probs=67.4
Q ss_pred cchhhHHHHHHHHHHHhcCCCCCcceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCcccccccCCCCCcccccccccc
Q 009044 178 RETLSLGIAYSVFSLLTRVTWLAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYGIR 257 (546)
Q Consensus 178 ~~~~gval~LaL~~yl~r~~~waKDIIfl~~D~~~g~~~G~~AWL~~YH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (546)
++-.|++.++.+++.+++.+ ...|+++++++.++-+..|.+.--.... |
T Consensus 166 DnR~g~~~lle~l~~l~~~~-~~~~v~~~~tvqEEvG~rGa~~aa~~i~-p----------------------------- 214 (344)
T PRK09961 166 DDRLGCYLLVTLLRELHDAE-LPAEVWLVASSSEEVGLRGGQTATRAVS-P----------------------------- 214 (344)
T ss_pred hhhHhHHHHHHHHHHhhhcC-CCceEEEEEEcccccchHHHHHHHhccC-C-----------------------------
Confidence 45679999999999887554 5899999999998878888776643321 1
Q ss_pred cccceeeeEEEEecCCCCCCce-----------EEEEeecCCCCCCChhHHHHHHHHHhhccCceEEEe
Q 009044 258 RSGTMAAALVLGVAYGNENEDT-----------LGIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVE 315 (546)
Q Consensus 258 raG~I~aAlvle~~~~~~~~~~-----------l~I~~eG~NGqLPNLDLiN~v~~ia~~~~g~~v~l~ 315 (546)
..||++|+....+.++. .-|..- -.|-.+|-.++..+.++|. +.|+++.+.
T Consensus 215 -----d~~I~vDv~~~~d~~~~~~~~~~~lg~Gp~i~~~-D~~~i~~~~l~~~l~~~A~-~~~Ip~Q~~ 276 (344)
T PRK09961 215 -----DVAIVLDTACWAKNFDYGAANHRQIGNGPMLVLS-DKSLIAPPKLTAWIETVAA-EIGIPLQAD 276 (344)
T ss_pred -----CEEEEEeccCCCCCCCCCCCcccccCCCceEEEc-cCCcCCCHHHHHHHHHHHH-HcCCCcEEE
Confidence 13666665533221111 112111 3388999999999999996 667777663
No 81
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=52.05 E-value=53 Score=35.12 Aligned_cols=66 Identities=14% Similarity=0.102 Sum_probs=45.6
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEE
Q 009044 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIl 153 (546)
..++.++|-+...-++. ..++++++.++|+++|.|+.+-+ --|++|.+
T Consensus 5 ~~~lLk~Lv~~~s~SG~-E~~V~~~l~~~l~~~g~ev~~D~-------------------------------~Gnlia~~ 52 (343)
T TIGR03106 5 LTETLLALLAIPSPTGF-TDAVVRYVAERLEDLGIEYELTR-------------------------------RGAIRATL 52 (343)
T ss_pred HHHHHHHHhcCCCCCCC-HHHHHHHHHHHHHHcCCeEEECC-------------------------------CeEEEEEE
Confidence 45566777776664443 34789999999999999866321 13789987
Q ss_pred eCCCCCCceEEEEEEeecCC
Q 009044 154 RAPRGDGKEAIVLVTPYNAV 173 (546)
Q Consensus 154 rAPRgdgtEAIVL~ap~~~~ 173 (546)
++. .+...++|++|.|..
T Consensus 53 ~g~--~~~~~v~l~aHmDev 70 (343)
T TIGR03106 53 PGR--EATPARAVVTHLDTL 70 (343)
T ss_pred CCC--CCCCeEEEEEeeccc
Confidence 552 223479999988763
No 82
>COG1473 AbgB Metal-dependent amidase/aminoacylase/carboxypeptidase [General function prediction only]
Probab=50.00 E-value=2.1e+02 Score=31.30 Aligned_cols=118 Identities=16% Similarity=0.145 Sum_probs=71.5
Q ss_pred HHHHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEE
Q 009044 74 ANKLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGII 153 (546)
Q Consensus 74 a~~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIl 153 (546)
..+++++|.+...-+.++. .-.++|.+.|+++|.|+. .. ...++-++|.+
T Consensus 14 l~~~rr~lH~~PEL~f~E~-~Ta~~i~~~L~~~g~~~~-~~----------------------------~~~~TGvva~~ 63 (392)
T COG1473 14 LIEWRRDLHEHPELGFEEY-RTAAYIAEKLEELGFEVV-EV----------------------------GGGKTGVVATL 63 (392)
T ss_pred HHHHHHHHhhCCccchhHH-HHHHHHHHHHHHcCCeeE-ec----------------------------cCCceEEEEEE
Confidence 4445555555544433322 346899999999999822 11 01235678888
Q ss_pred eCCCCCCceEEEEEEeecCC-------------CCCC---c-chhhHHHHHHHHHHHhcC-CCCCcceEEEeeCCCCCCc
Q 009044 154 RAPRGDGKEAIVLVTPYNAV-------------KGGV---R-ETLSLGIAYSVFSLLTRV-TWLAKDIIWLVADSQYGEY 215 (546)
Q Consensus 154 rAPRgdgtEAIVL~ap~~~~-------------~~~~---~-~~~gval~LaL~~yl~r~-~~waKDIIfl~~D~~~g~~ 215 (546)
++.. +|. .|.|-+-+|.- +.+. . -..-.+.+|..+++|++. .-+.-.+.|+|-=+++++.
T Consensus 64 ~~g~-~g~-tIalRAD~DALPi~E~t~~~~~S~~~G~mHACGHD~Hta~lLgaA~~L~~~~~~~~Gtv~~ifQPAEE~~~ 141 (392)
T COG1473 64 KGGK-PGP-TIALRADMDALPIQEETGLPFASKNPGVMHACGHDGHTAILLGAALALAEHKDNLPGTVRLIFQPAEEGGG 141 (392)
T ss_pred cCCC-CCC-EEEEEeecccCccccccCCCcccCCCCCcccCCchHHHHHHHHHHHHHHhhhhhCCcEEEEEecccccccc
Confidence 8633 333 88888877542 1110 0 012345566777888766 5679999999977766543
Q ss_pred hhHHHHHHh
Q 009044 216 APVAAWLRD 224 (546)
Q Consensus 216 ~G~~AWL~~ 224 (546)
|.+.-+++
T Consensus 142 -Ga~~mi~~ 149 (392)
T COG1473 142 -GAKAMIED 149 (392)
T ss_pred -cHHHHHhc
Confidence 76666665
No 83
>TIGR03106 trio_M42_hydro hydrolase, peptidase M42 family. This model describes a subfamily of MEROPS peptidase family M42, a glutamyl aminopeptidase family that also includes the cellulase CelM from Clostridium thermocellum and deblocking aminopeptidases that can remove acylated amino acids. Members of this family occur in a three gene cassette with an amidotransferase (TIGR03104)in the asparagine synthase (glutamine-hydrolyzing) family, and a probable acetyltransferase (TIGR03103) in the GNAT family.
Probab=43.30 E-value=1.4e+02 Score=32.03 Aligned_cols=100 Identities=10% Similarity=0.062 Sum_probs=59.9
Q ss_pred CcchhhHHHHHHHHHHHhcCCC-CCcceEEEeeCCCCCCchhHHHHHHhhcCCCCCCCCCcccccccCCCCCcccccccc
Q 009044 177 VRETLSLGIAYSVFSLLTRVTW-LAKDIIWLVADSQYGEYAPVAAWLRDYHTPAFSNLDSLNTETCHVGNNNFESKISYG 255 (546)
Q Consensus 177 ~~~~~gval~LaL~~yl~r~~~-waKDIIfl~~D~~~g~~~G~~AWL~~YH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (546)
.++..|++.++.+++.+++..+ ..+|+.++|+-.++-+ .| .++.-. .+
T Consensus 182 ~D~K~G~a~~l~~~~~l~~~~~~~~~~v~~~~t~qEEvG-~g-----aa~~i~-------------------------pd 230 (343)
T TIGR03106 182 LDDKAGVAALLAALKAIVEHKVPLPVDVHPLFTITEEVG-SG-----ASHALP-------------------------PD 230 (343)
T ss_pred cccHHhHHHHHHHHHHHHhcCCCCCceEEEEEECCcccC-cc-----chhccc-------------------------Hh
Confidence 3456799999999999976544 5799999998554433 23 122110 00
Q ss_pred cccccceeeeEEEEecCCCCCCceE----EEEeecCCCCCCChhHHHHHHHHHhhccCceEEEe
Q 009044 256 IRRSGTMAAALVLGVAYGNENEDTL----GIYAEASNGQMPNLDLINIVHYLAVHRQGLRVKVE 315 (546)
Q Consensus 256 ~~raG~I~aAlvle~~~~~~~~~~l----~I~~eG~NGqLPNLDLiN~v~~ia~~~~g~~v~l~ 315 (546)
+.-++++|..........+ .|. -...|-.+|-.+.+-+..+|. +.|+|+..+
T Consensus 231 ------~a~~i~vd~~~~~p~~~~lg~Gp~i~-~~d~~~~~~~~l~~~l~~~A~-~~~Ip~Q~~ 286 (343)
T TIGR03106 231 ------VAELVSVDNGTVAPGQNSSEHGVTIA-MADSSGPFDYHLTRKLIRLCQ-DHGIPHRRD 286 (343)
T ss_pred ------hhccEEEEecccCCCCCcCCCCceEE-EecCCCCCCHHHHHHHHHHHH-HcCCCcEEE
Confidence 1123555544221010001 111 123488899999999999996 678887764
No 84
>PRK09961 exoaminopeptidase; Provisional
Probab=38.73 E-value=82 Score=33.59 Aligned_cols=63 Identities=14% Similarity=0.162 Sum_probs=43.2
Q ss_pred HHHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeC
Q 009044 76 KLIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRA 155 (546)
Q Consensus 76 ~y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrA 155 (546)
++.++|-+...-++. ..++++++.++|+++|.++.+-+ =-|+++.+++
T Consensus 4 ~~L~~L~~~~s~sG~-E~~v~~~i~~~l~~~~~~v~~D~-------------------------------~Gnvi~~~~g 51 (344)
T PRK09961 4 SLLKALSEADAIASS-EQEVRQILLEEADRLQKEVRFDG-------------------------------LGSVLIRLNE 51 (344)
T ss_pred HHHHHHHhCCCCCCC-hHHHHHHHHHHHHhhCCEEEECC-------------------------------CCCEEEEEcC
Confidence 345666666655443 34789999999999998865321 1378898765
Q ss_pred CCCCCceEEEEEEeecCC
Q 009044 156 PRGDGKEAIVLVTPYNAV 173 (546)
Q Consensus 156 PRgdgtEAIVL~ap~~~~ 173 (546)
+ .+. .++|.+|.|..
T Consensus 52 -~-~~~-~v~l~aHmDev 66 (344)
T PRK09961 52 -S-TGP-KVMICAHMDEV 66 (344)
T ss_pred -C-CCC-EEEEEecccee
Confidence 2 223 79999998864
No 85
>TIGR03107 glu_aminopep glutamyl aminopeptidase. This model represents the M42.001 clade within MEROPS family M42. M42 includes glutamyl aminopeptidase as in the present model, deblocking aminopeptidases as from Pyrococcus horikoshii and related species, and endo-1,4-beta-glucanase (cellulase M) as from Clostridium thermocellum. The current family includes
Probab=38.59 E-value=89 Score=33.55 Aligned_cols=63 Identities=16% Similarity=0.197 Sum_probs=42.2
Q ss_pred HHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCCC
Q 009044 78 IKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAPR 157 (546)
Q Consensus 78 ~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAPR 157 (546)
.++|.+...-++. .+++++++.++|+++|.|+.+-++ -|++|+.++..
T Consensus 4 L~~L~~~~gpSG~-E~~v~~~i~~~l~~~~~~v~~D~~-------------------------------GNvia~~~g~~ 51 (350)
T TIGR03107 4 IKEVTELQGTSGF-EHPIRDYLRQDITPLVDQVETDGL-------------------------------GGIFGIKESQV 51 (350)
T ss_pred HHHHHhCCCCCCC-cHHHHHHHHHHHHhhCCEEEECCC-------------------------------CCEEEEecCCC
Confidence 4556565554443 357899999999999987653321 38899865421
Q ss_pred CCCceEEEEEEeecCC
Q 009044 158 GDGKEAIVLVTPYNAV 173 (546)
Q Consensus 158 gdgtEAIVL~ap~~~~ 173 (546)
..+. .++|.+|.|..
T Consensus 52 ~~~~-~vml~AHmDeV 66 (350)
T TIGR03107 52 ENAP-RVMVAAHMDEV 66 (350)
T ss_pred CCCC-EEEEEecccEe
Confidence 2233 89999998764
No 86
>PHA02673 ORF109 EEV glycoprotein; Provisional
Probab=27.95 E-value=51 Score=31.60 Aligned_cols=38 Identities=24% Similarity=0.296 Sum_probs=30.0
Q ss_pred cccccchhHHHHHHHHHhchhhHHHHHHHHHHHHHhccc
Q 009044 7 SKKRKRPIVRLAVLLLSHSVLVSVICCTAGVFGLLLLPV 45 (546)
Q Consensus 7 ~~~~~r~~~rl~~~l~~~~~~ls~ll~l~Gi~wll~LP~ 45 (546)
..+|++++.|...+++|....+|+ +.++.++.+|.|-+
T Consensus 21 s~~r~k~~~R~i~l~~Ri~~~iSI-isL~~l~v~LaL~l 58 (161)
T PHA02673 21 SVKRQKAIRRYIKLFFRLMAAIAI-IVLAILVVILALAL 58 (161)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 468999999998889999888886 55667777776654
No 87
>PRK09864 putative peptidase; Provisional
Probab=21.56 E-value=2.5e+02 Score=30.36 Aligned_cols=61 Identities=13% Similarity=0.117 Sum_probs=41.9
Q ss_pred HHHHHHhhhcCCCCCccchHHHHHHHHHhcCCceeeeecccCCCcCCCcccccCCCCCccccCCccccccceEEEEEeCC
Q 009044 77 LIKELNNLHSNPLGATTESHGIIAKYMSNLGAQVNNHKFHPQLNQFHPLHFFSGPDSGVMQENSTRSLYGINTVGIIRAP 156 (546)
Q Consensus 77 y~~el~~~~~~~~~~~~~~~~~I~~~l~~lGle~~~q~f~~~~~~f~~~~~f~~~~~~~~~~n~~~~~~G~NvygIlrAP 156 (546)
+.++|.+...-++. ..++++++.++|++++.|+.+-+ =-|++++. +
T Consensus 5 ~L~~L~~~~g~SG~-E~~v~~~l~~~l~~~~dev~~D~-------------------------------~GNli~~~-g- 50 (356)
T PRK09864 5 LLQQLCEASAVSGD-EQEVRDILINTLEPCVNEITFDG-------------------------------LGSFVARK-G- 50 (356)
T ss_pred HHHHHHcCCCCCCc-hHHHHHHHHHHHHHhCCEEEECC-------------------------------CCCEEEEe-C-
Confidence 45666666654444 35789999999999998865332 13788874 3
Q ss_pred CCCCceEEEEEEeecCC
Q 009044 157 RGDGKEAIVLVTPYNAV 173 (546)
Q Consensus 157 RgdgtEAIVL~ap~~~~ 173 (546)
+ .+ ..++|.+|.|..
T Consensus 51 ~-~~-~kvml~AHmDev 65 (356)
T PRK09864 51 N-KG-PKVAVVGHMDEV 65 (356)
T ss_pred C-CC-cEEEEEeccccc
Confidence 2 22 389999998864
Done!