Query 009047
Match_columns 545
No_of_seqs 156 out of 186
Neff 5.6
Searched_HMMs 13730
Date Mon Mar 25 17:37:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/009047.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/009047hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2d2sa1 a.118.17.2 (A:525-753) 91.2 0.25 1.8E-05 45.7 8.1 70 136-205 7-80 (229)
2 d1lvfa_ a.47.2.1 (A:) Syntaxin 22.5 64 0.0047 25.3 5.6 53 53-106 53-105 (106)
3 d2r40d1 a.123.1.1 (D:287-529) 22.1 1.5E+02 0.011 25.9 8.8 70 39-108 157-226 (243)
4 d2jdia1 a.69.1.1 (A:380-510) F 20.5 51 0.0037 26.9 4.7 56 2-77 72-130 (131)
5 d2d5ba1 a.27.1.1 (A:349-500) M 19.7 47 0.0034 27.2 4.3 37 138-174 33-69 (152)
6 d1seta1 a.2.7.1 (A:1-110) Sery 18.8 1.9E+02 0.014 22.1 9.0 94 97-212 4-102 (110)
7 d1d2za_ a.77.1.2 (A:) Pelle de 14.0 24 0.0017 27.4 0.8 31 319-350 71-101 (102)
8 d1pfva1 a.27.1.1 (A:389-550) M 13.5 93 0.0068 25.6 4.7 36 138-173 30-65 (162)
9 d1rsob_ a.194.1.1 (B:) Periphe 12.5 1.3E+02 0.0095 21.2 4.4 36 128-163 9-48 (56)
10 d2crba1 a.7.16.1 (A:8-90) Nucl 10.7 1.2E+02 0.0084 23.2 3.9 29 145-173 12-40 (83)
No 1
>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.18 E-value=0.25 Score=45.71 Aligned_cols=70 Identities=13% Similarity=0.100 Sum_probs=51.4
Q ss_pred HhHHHhhccHHHHHHHHhccCHHHHHHHHHHHHHHHccc----CCCCcCccHHHHHHHHHhHHHHHHHHHHHHH
Q 009047 136 DQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLERE----GLQTVGALQDVRSELTKLRGVLFYKVLEDLH 205 (545)
Q Consensus 136 d~Ie~L~~vP~kIe~lIseK~yl~Av~LL~~s~~ll~~~----eL~~I~AL~dLR~~L~~qe~~L~d~LiEELh 205 (545)
..|+.|...|+.++..|++++|.+|++++..+-..+.+- ....+..+..++..+.+.+..|.+.|..+|.
T Consensus 7 ~~~~wl~d~~d~LDv~Ia~~~feeAl~ll~~~e~~l~~~~~~~~~~~~~~~~~i~~kv~~r~~~L~~~L~~~l~ 80 (229)
T d2d2sa1 7 QRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSIL 80 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHhcccHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 457788899999999999999999999998877766542 1223334455777777877777777766663
No 2
>d1lvfa_ a.47.2.1 (A:) Syntaxin 6, SNAP-25 homolog {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=22.49 E-value=64 Score=25.28 Aligned_cols=53 Identities=13% Similarity=0.238 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHH
Q 009047 53 ILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAE 106 (545)
Q Consensus 53 ~Le~~~~~l~~~L~~vV~eh~q~FN~sI~sy~~I~~~I~~Sq~~i~~lK~~L~~ 106 (545)
-++.+.+.+++++. +|..|-.-|+-.-..-..=...|...+.+|..||..|..
T Consensus 53 siewdL~dLe~av~-~ve~np~kf~l~~~ei~~Rr~fi~~~~~~I~~~~~~l~~ 105 (106)
T d1lvfa_ 53 SIEWDLEDLDETIS-IVEANPRKFNLDATELSIRKAFITSTRQIVRDMKDQMSA 105 (106)
T ss_dssp HHHHHHHHHHHHHH-HHHSSGGGGTCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHH-HHHhCHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 34444444445544 355665666545444555566778888888888887764
No 3
>d2r40d1 a.123.1.1 (D:287-529) Ecdysone receptor {Noctuid moth (Heliothis virescens) [TaxId: 7102]}
Probab=22.06 E-value=1.5e+02 Score=25.89 Aligned_cols=70 Identities=7% Similarity=0.053 Sum_probs=47.2
Q ss_pred HhhcCCCchhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 009047 39 VHILTSKDREGEVQILKDQNDIIEEVVDEVVHAYHTGFNKAIQNYSQILRLFSESAESIKELKVDLAEAK 108 (545)
Q Consensus 39 l~lLss~~~E~~~~~Le~~~~~l~~~L~~vV~eh~q~FN~sI~sy~~I~~~I~~Sq~~i~~lK~~L~~ak 108 (545)
+-+++..+.-.+..++++.++.+-.+|+..+..+|..+-..-..|++++..+.+-+.-...--+.|..-|
T Consensus 157 ivL~sd~~~L~~~~~ve~lq~~~~~aL~~y~~~~~~~~p~~~~rf~~LL~~L~~LR~l~~~~~e~l~~~k 226 (243)
T d2r40d1 157 IVIFSDRPGLEQPLLVEEIQRYYLNTLRVYILNQNSASPRCAVIFGKILGILTEIRTLGMQNSNMCISLK 226 (243)
T ss_dssp HHHTSCCTTCSCHHHHHHHHHHHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4445533333445678888899999999999888877655556888888888776655444444444433
No 4
>d2jdia1 a.69.1.1 (A:380-510) F1 ATP synthase alpha subunit, domain 3 {Cow (Bos taurus) [TaxId: 9913]}
Probab=20.54 E-value=51 Score=26.87 Aligned_cols=56 Identities=16% Similarity=0.274 Sum_probs=33.6
Q ss_pred CCCCCCCCCCChHHHHHHHHHhHhhhCCCCCCchhHHHhhcCCCchhHHHHHHHHH---HHHHHHHHHHHHHHhHHHHH
Q 009047 2 DIFDGLPISPEKAYLREELARIEVSWVAPRFDSLPHVVHILTSKDREGEVQILKDQ---NDIIEEVVDEVVHAYHTGFN 77 (545)
Q Consensus 2 ~~~~~~p~p~d~~~l~evL~~I~~eW~~~~fd~l~~vl~lLss~~~E~~~~~Le~~---~~~l~~~L~~vV~eh~q~FN 77 (545)
|.||+.|++-=.....++++.++...+ .++ .++.+. .+.+.+.|.++|.++-..|+
T Consensus 72 G~lD~i~v~~I~~fe~~ll~~l~~~~~-----------~~l---------~~I~~~~~l~de~~~~L~~ai~~f~~~F~ 130 (131)
T d2jdia1 72 GYLDKLEPSKITKFENAFLSHVISQHQ-----------ALL---------GKIRTDGKISEESDAKLKEIVTNFLAGFE 130 (131)
T ss_dssp TTTTTSCGGGHHHHHHHHHHHHHHTCH-----------HHH---------HHHHHHTSCCHHHHHHHHHHHHHHHHHHT
T ss_pred CCccccCHHHHHHHHHHHHHHHHHhCH-----------HHH---------HHHHHcCCCCHHHHHHHHHHHHHHHHHcc
Confidence 667777766544555666666666665 222 233221 24566777888887777775
No 5
>d2d5ba1 a.27.1.1 (A:349-500) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]}
Probab=19.73 E-value=47 Score=27.25 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=32.7
Q ss_pred HHHhhccHHHHHHHHhccCHHHHHHHHHHHHHHHccc
Q 009047 138 IEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLERE 174 (545)
Q Consensus 138 Ie~L~~vP~kIe~lIseK~yl~Av~LL~~s~~ll~~~ 174 (545)
++++.+++.++..+|.+-+|..|++.+.+-...+|++
T Consensus 33 ~~~~~~~~~~~~~~~e~~~~~~al~~i~~~~~~~N~y 69 (152)
T d2d5ba1 33 LAEGTGLAGRLRPLVRELKFHVALEEAMAYVKALNRY 69 (152)
T ss_dssp GGGGGGHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 5667788999999999999999999999888888874
No 6
>d1seta1 a.2.7.1 (A:1-110) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]}
Probab=18.81 E-value=1.9e+02 Score=22.07 Aligned_cols=94 Identities=16% Similarity=0.145 Sum_probs=46.5
Q ss_pred HHHHHHHHHHHHHHhccCc-----HHHHHHHHHhhHHHHHHHHHHhHHHhhccHHHHHHHHhccCHHHHHHHHHHHHHHH
Q 009047 97 IKELKVDLAEAKRRLGTRN-----KQLHQLWYRSVTLRHIISLLDQIEGIAKVPARIEKLIAGKQYYAAVQLHAQSALML 171 (545)
Q Consensus 97 i~~lK~~L~~ak~~L~~r~-----~eL~~L~~~s~~~~~mL~iLd~Ie~L~~vP~kIe~lIseK~yl~Av~LL~~s~~ll 171 (545)
+.-+|++....+..|..|. +.+.+|+. +++.++.-+ +.++.=--.+..-|.+..--.+..++.+
T Consensus 4 ik~ir~n~e~v~~~l~~R~~~~~ld~i~~ld~---~rr~l~~~~---e~l~~~rN~~sk~i~k~~~~~~~~l~~~----- 72 (110)
T d1seta1 4 LKRLRQEPEVFHRAIREKGVALDLEALLALDR---EVQELKKRL---QEVQTERNQVAKRVPKAPPEEKEALIAR----- 72 (110)
T ss_dssp HHHHHHCHHHHHHHHHHTTCCCCHHHHHHHHH---HHHHHHHHH---HHHHHHHHHHHHHGGGCCHHHHHHHHHH-----
T ss_pred HHHHHhCHHHHHHHHHHcCCccCHHHHHHHHH---HHHHHHHHH---HHHHHHHHHHHHHHHHhhccchHHHHHH-----
Confidence 3456667777777665553 34444443 333333333 3333333344445544433333333222
Q ss_pred cccCCCCcCccHHHHHHHHHhHHHHHHHHHHHHHHhHhcCC
Q 009047 172 EREGLQTVGALQDVRSELTKLRGVLFYKVLEDLHAHLYNRG 212 (545)
Q Consensus 172 ~~~eL~~I~AL~dLR~~L~~qe~~L~d~LiEELh~~lYlK~ 212 (545)
...|++++...+..+ ..+-++|+..+..=+
T Consensus 73 ----------~k~lk~~i~~le~~~-~~~~~~l~~~ll~iP 102 (110)
T d1seta1 73 ----------GKALGEEAKRLEEAL-REKEARLEALLLQVP 102 (110)
T ss_dssp ----------HHHHHHHHHHHHHHH-HHHHHHHHHHHTTCC
T ss_pred ----------HHHHHHHHHHHHHHH-HHHHHHHHHHHHcCC
Confidence 345566666666655 445566666665433
No 7
>d1d2za_ a.77.1.2 (A:) Pelle death domain {Drosophila melanogaster [TaxId: 7227]}
Probab=14.00 E-value=24 Score=27.41 Aligned_cols=31 Identities=19% Similarity=0.172 Sum_probs=26.7
Q ss_pred HHHHHHHHHhhCChHHHHHHHHhhhhHHHHHH
Q 009047 319 LQTMVECLCILGKVAAAGAIICQRLRPTIHEI 350 (545)
Q Consensus 319 i~~llesL~~LgKL~~Al~~i~qRl~~Elh~l 350 (545)
++.|+++|..||+. .|+++|.+=+...+|.+
T Consensus 71 v~~L~~~L~~~~~~-da~~~i~~~~~~~~~~~ 101 (102)
T d1d2za_ 71 VQTLFALFKKLKLH-NAMRLIKDYVSEDLHKY 101 (102)
T ss_dssp HHHHHHHHHHTTCH-HHHHHTGGGSCGGGGGG
T ss_pred HHHHHHHHHHcChH-HHHHHHHHHHHHHHHhh
Confidence 78999999999998 88899988888777754
No 8
>d1pfva1 a.27.1.1 (A:389-550) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]}
Probab=13.47 E-value=93 Score=25.55 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=31.3
Q ss_pred HHHhhccHHHHHHHHhccCHHHHHHHHHHHHHHHcc
Q 009047 138 IEGIAKVPARIEKLIAGKQYYAAVQLHAQSALMLER 173 (545)
Q Consensus 138 Ie~L~~vP~kIe~lIseK~yl~Av~LL~~s~~ll~~ 173 (545)
++.+.+.+.++..+|.+-+|..|++.+..-...+|+
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~al~~i~~~~~~~Nk 65 (162)
T d1pfva1 30 YKTFTDAAEVIGEAWESREFGKAVREIMALADLANR 65 (162)
T ss_dssp HHHHHHTHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 456668889999999999999999999888888777
No 9
>d1rsob_ a.194.1.1 (B:) Peripheral plasma membrane protein cask {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=12.53 E-value=1.3e+02 Score=21.24 Aligned_cols=36 Identities=8% Similarity=0.280 Sum_probs=27.4
Q ss_pred HHHHHHHHHhHHHhhcc----HHHHHHHHhccCHHHHHHH
Q 009047 128 LRHIISLLDQIEGIAKV----PARIEKLIAGKQYYAAVQL 163 (545)
Q Consensus 128 ~~~mL~iLd~Ie~L~~v----P~kIe~lIseK~yl~Av~L 163 (545)
..++|+.|++|+.|... ++.+.....+.++.+=.++
T Consensus 9 V~~iLDSLddI~~Lqd~~~~d~d~L~~~~~D~~LhaLLel 48 (56)
T d1rsob_ 9 VSQVLDSLEEIHALTDSSEKDLDFLHSVFQDQHLHTLLDL 48 (56)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHcccccCHHHHHHHHHHHHHHHHHHH
Confidence 35789999999999877 5677777788777665554
No 10
>d2crba1 a.7.16.1 (A:8-90) Nuclear receptor binding factor 2, NRBF2, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=10.74 E-value=1.2e+02 Score=23.20 Aligned_cols=29 Identities=24% Similarity=0.463 Sum_probs=24.6
Q ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHcc
Q 009047 145 PARIEKLIAGKQYYAAVQLHAQSALMLER 173 (545)
Q Consensus 145 P~kIe~lIseK~yl~Av~LL~~s~~ll~~ 173 (545)
.-+-|.++..++|.+|+++...+..-+..
T Consensus 12 ~RrAer~l~~~rydeAIech~kA~~yl~e 40 (83)
T d2crba1 12 SRRADRLLAAGKYEEAISCHRKATTYLSE 40 (83)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 35678999999999999999999886653
Done!